isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
Isoform_1000_70	chr10	-	2535	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8106	False	NA	-11	True	ATTAAA	-28	NA	62486997	62451793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_10000_10	chr11	+	878	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	-109	2269	-109	-2269	multi-exon	FALSE	canonical	3	249	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTTCCCATGTTCCT	NA	False	NA	17	True	AATAAA	-24	NA	86574701	86581014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86574950_86580384
Isoform_10002_10	chr11	+	3008	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	27	2	10	-1	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTCCATGTTATA	NA	False	NA	11	True	AATAAA	-19	NA	87000086	87015459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_10004_15	chr11	+	1237	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	27	1773	10	755	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTTTAGACTTTCT	NA	False	NA	3	True	AATAAA	-21	NA	87000086	87013688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_10005_3	chr11	+	1311	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-47	1773	-47	755	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTTTAGACTTTCT	NA	False	NA	3	True	AATAAA	-21	NA	87000012	87013688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_10007_3	chr11	+	3081	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-46	2	-46	-1	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTCCATGTTATA	NA	False	NA	11	True	AATAAA	-19	NA	87000013	87015459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
Isoform_1001_15	chr10	-	2560	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-33	8	-33	-8	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8073	False	NA	-19	True	ATTAAA	-20	NA	62487030	62451801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_10012_18	chr11	+	4431	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-2	1203	-2	-1203	multi-exon	TRUE	canonical	3	377	junction_12	47.8466359016781	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCTGCAGTTTA	1914	False	NA	23	True	AATAAA	-13	NA	87017900	87110306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_10014_24	chr11	+	4316	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	113	1203	113	-1203	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCTGCAGTTTA	2029	False	NA	23	True	AATAAA	-13	NA	87018015	87110306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_10015_4	chr11	+	5487	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	144	1	-84	-1	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	2060	False	NA	12	True	AATAAA	-14	NA	87018046	87111508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
Isoform_10016_27	chr11	+	3562	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-1	30189	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1915	False	NA	6	True	NA	NA	NA	87017901	87141698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_10017_46	chr11	+	3447	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	113	30188	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	2029	False	NA	5	True	NA	NA	NA	87018015	87141697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_10019_6	chr11	+	3424	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-95	30187	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	113.484389222581	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	2049	False	NA	4	True	NA	NA	NA	87018035	87141696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075711_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_1002_4	chr10	-	2365	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	72.4032102331865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTGTGTTAAGAGT	8109	False	NA	-16	True	ATTAAA	-23	NA	62486994	62451798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
Isoform_10020_3	chr11	+	3564	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-5	30188	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	142.281551617051	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	1911	False	NA	5	True	NA	NA	NA	87017897	87141697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075711_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100593_87100714_87107262_87107374_87109077_87109157_87141416
Isoform_10021_6	chr11	+	3289	15	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	38572	0	32485	5prime_fragment	FALSE	canonical	1	19	junction_12	15.5556932290636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87295890	87408077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493
Isoform_10023_3	chr11	+	4838	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	-76	1	-76	-1	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295814	87446648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_10024_19	chr11	+	4762	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	1	0	-1	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295890	87446648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_10025_6	chr11	+	4785	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	28.5654025391245	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295866	87446649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440259_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_10026_3	chr11	+	4684	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_25	28.6387977613865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295890	87446648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
Isoform_10027_3	chr11	+	3123	14	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	32485	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	23.3924581989947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87295890	87408077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493
Isoform_10028_3	chr11	+	4702	20	NIC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	38.4952419983262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCACTTCCCCCATGTTG	NA	False	NA	5	True	AATAAA	-18	NA	87483039	87506000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87483077_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_10029_7	chr11	+	4575	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	54	1124	-3	6	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCCCCATGTTGTCTT	NA	False	NA	9	True	AATAAA	-22	NA	87483041	87506004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_10030_6	chr11	+	4608	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	25	1120	25	10	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCATGTTGTCTTTCCC	NA	False	NA	13	True	AATAAA	-26	NA	87483012	87506008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_10032_13	chr11	+	4718	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCCCCATGTTGTCT	NA	False	NA	8	True	AATAAA	-21	NA	87486478	87506003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_10033_3	chr11	+	5863	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGGGTCTTTTTATT	NA	False	NA	19	True	AATAAA	-19	NA	87486457	87507127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
Isoform_10035_6	chr11	+	831	6	FSM	ENSMUSG00000020485.15	ENSMUST00000152700.8	854	6	17	6	16	0	multi-exon	FALSE	canonical	3	12	junction_2	256.77351888386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628394	87634443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87628495_87628992_87629100_87631330_87631473_87633621_87633678_87633883_87633938_87634071
Isoform_10036_134	chr11	+	694	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	12	0	11	0	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628389	87634443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
Isoform_10038_205	chr11	+	2499	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6456	False	NA	18	True	TATAAA	-20	NA	87744040	87754629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_10041_14	chr11	+	3358	2	FSM	ENSMUSG00000018379.18	ENSMUST00000171976.2	645	2	-54	-2659	-47	-5	multi-exon	FALSE	canonical	3	1310	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6548	False	NA	16	True	AATAAA	-10	NA	87938496	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315
Isoform_10042_13	chr11	+	2989	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-46	5	-46	-5	multi-exon	FALSE	canonical	3	1310	junction_1	135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6549	False	NA	16	True	AATAAA	-10	NA	87938497	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868
Isoform_10044_409	chr11	+	2744	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	348	2270	3	-5	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6598	False	NA	16	True	AATAAA	-10	NA	87938546	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_10048_43	chr11	+	2868	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	348	2146	3	119	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGACTGTCTCTGTTG	6598	False	NA	8	True	ATTAAA	-11	NA	87938546	87942435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_10050_28	chr11	+	3213	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	348	1801	3	464	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATAGAGTGTTCTGTCGC	6598	False	NA	6	True	AATAAA	-20	NA	87938546	87942780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_10051_15	chr11	+	3262	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	305	1795	-40	470	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTGTCGCCAAACT	6555	False	NA	12	True	AATAAA	-26	NA	87938503	87942786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_10053_14	chr11	+	2860	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	232	2270	-113	-5	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6482	False	NA	16	True	AATAAA	-10	NA	87938430	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
Isoform_10056_12	chr11	+	1864	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	2	-5	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6597	False	NA	16	True	AATAAA	-10	NA	87938545	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
Isoform_10057_27	chr11	+	2059	4	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	3	-5	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGATGCATGGTTGTC	6598	False	NA	16	True	AATAAA	-10	NA	87938546	87942311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
Isoform_10062_3	chr11	+	3575	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	0	1008	0	-1008	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAATATGTAGCTATGA	NA	False	NA	6	True	AATAAA	-11	NA	87959104	87974547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
Isoform_10063_7	chr11	+	1994	6	FSM	ENSMUSG00000018378.14	ENSMUST00000133149.2	1844	6	7	-157	7	157	multi-exon	FALSE	canonical	2	4	junction_1	7.56306816047562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAAGAAGAAG	3486	False	NA	NA	False	NA	NA	NA	87990122	88076348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459
Isoform_10064_15	chr11	+	1773	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	157	1250	13	-114	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCCCCTTTCCAGAA	3492	False	NA	NA	False	NA	NA	NA	87990128	88083716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
Isoform_10065_52	chr11	+	1293	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	39	0	3	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095252	88102333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
Isoform_10066_73	chr11	+	748	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	39	545	3	-9	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTAAATTTACTTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	88095252	88101788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
Isoform_10068_13	chr11	+	1393	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	11	0	-2	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095247	88102333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
Isoform_10070_45	chr11	+	577	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	3	18496	3	-17837	5prime_fragment	FALSE	canonical	3	638	junction_1	568	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	9434	False	NA	13	True	AATAAA	-45	NA	88861080	88863943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_88861099_88861243_88861306_88863446
Isoform_10073_42	chr11	+	1012	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	3	-17547	intron_retention	FALSE	canonical	3	1774	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATCTTCCTATTTAT	9434	False	NA	NA	False	NA	NA	NA	88861080	88864233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_88861306_88863446
Isoform_10075_47	chr11	+	859	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	3	-17547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	887	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATCTTCCTATTTAT	9434	False	NA	NA	False	NA	NA	NA	88861080	88864233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_88861091_88861243_88861306_88863446
Isoform_10076_64	chr11	+	722	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	3	-17837	intron_retention	FALSE	canonical	3	1774	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	9434	False	NA	13	True	AATAAA	-45	NA	88861080	88863943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_88861306_88863446
Isoform_10077_6	chr11	+	856	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	134	-17548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	887	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9565	False	NA	NA	False	NA	NA	NA	88861211	88864232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_88861220_88861243_88861306_88863446
Isoform_10079_8	chr11	+	4149	8	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	336	junction_3	495.280419436859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTCTGAGTTATGTTTT	9433	False	NA	17	True	AATAAA	-19	NA	88861079	88882441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_10083_591	chr11	+	2592	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	14	1	14	-1	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	-15	True	NA	14	True	AATAAA	-16	NA	88864774	88882438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_10085_31	chr11	+	2615	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	-9	1	-9	-1	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	NA	False	NA	14	True	AATAAA	-16	NA	88864751	88882438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_10089_8	chr11	+	2726	6	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	347	junction_1	21.2847363150216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCACTCTGAGTTATGT	NA	False	NA	14	True	AATAAA	-16	NA	88864761	88882438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_88865029_88871894_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
Isoform_1009_15	chr10	-	2613	18	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	4	8744	4	-31	5prime_fragment	TRUE	canonical	0	0	junction_4	91.878925898279	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGACAAAAAAGAAGACAGA	NA	False	NA	-32	True	NA	NA	NA	62628061	62588984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_10092_56	chr11	+	5479	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	66	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	180.202012841419	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCCTGCCTTTTGC	NA	False	NA	25	True	NA	NA	NA	88890267	88911120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910662_88910707
Isoform_10093_30	chr11	+	5518	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	27	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	180.202012841419	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCCTGCCTTTTGC	NA	False	NA	25	True	NA	NA	NA	88890228	88911120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910662_88910707
Isoform_10097_3	chr11	+	5496	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	27	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	209.118387522475	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCCTGCCTTTTGCAA	NA	False	NA	27	True	NA	NA	NA	88890228	88911122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88906358_88906458_88906544_88906644_88907020_88910662_88910707
Isoform_10098_7	chr11	+	763	2	ISM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	61781	-7	61781	7	3prime_fragment	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTTTAATGGACAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	90140290	90142088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_90140562_90141596
Isoform_10099_28	chr11	+	2699	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-33	11	-13	-11	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGAGCATATGGCTG	NA	False	NA	18	True	AATAAA	-23	NA	90140268	90169404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
Isoform_10102_34	chr11	+	2127	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-33	583	-13	-583	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCAGTTGTTGAT	NA	False	NA	8	True	AATAAA	-20	NA	90140268	90168832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
Isoform_10104_8	chr11	+	2256	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	14	-1046	14	1046	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTGTTTACAATATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90529012	90536803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
Isoform_10107_65	chr11	+	1216	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	13	-5	13	5	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGACAACTTGATTTCT	NA	False	NA	15	True	NA	NA	NA	90529011	90535762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
Isoform_10109_4	chr11	+	3569	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	-8	1684	-8	-20	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93776669	93836127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_10111_14	chr11	+	3647	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-38	-23	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93776994	93836124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_10112_6	chr11	+	3573	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-24	1683	-12	-19	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93777020	93836128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
Isoform_10114_5	chr11	+	2424	17	ISM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-71	33102	-59	-1246	5prime_fragment	FALSE	canonical	3	49	junction_7	9.91822029146359	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGGGTGGGTGGGTATG	605	False	NA	NA	False	NA	NA	NA	93886857	93983809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640
Isoform_10115_3	chr11	+	2791	19	ISM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-49	28650	-37	-445	5prime_fragment	FALSE	canonical	3	49	junction_7	10.1350449334213	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACCTTTGGAGAATCT	627	False	NA	NA	False	NA	NA	NA	93886879	93988261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043
Isoform_10116_14	chr11	+	490	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	-17	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94024310	94046602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
Isoform_10119_325	chr11	+	2293	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-15	10	-15	-10	multi-exon	FALSE	canonical	3	252	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAATGCCTATCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	94102264	94106311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94102558_94104311
Isoform_10122_4	chr11	+	2900	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	133	454	-120	-454	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCACTGGGGTTGAGA	4127	False	NA	NA	False	AATAAA	-19	NA	94218959	94232213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
Isoform_10123_3	chr11	+	3367	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	119	1	107	-1	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCCATTCTCTCTCGT	4113	False	NA	16	True	ATTAAA	-17	NA	94218945	94232666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
Isoform_10126_174	chr11	+	2857	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520572	94536042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
Isoform_10127_2706	chr11	+	2827	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	10	0	10	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	2706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520602	94536042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
Isoform_10138_9	chr11	+	799	4	FSM	ENSMUSG00000024414.14	ENSMUST00000132813.8	655	4	18	-162	18	-9	multi-exon	FALSE	canonical	3	14	junction_1	381.100453365718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544619	94550906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94544668_94547233_94547445_94547808_94547877_94550434
Isoform_10139_302	chr11	+	738	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	9	9	0	-9	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544601	94550906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
Isoform_10140_17	chr11	+	822	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-20	-363	0	-9	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAGATGGAAAGGG	NA	False	NA	10	True	NA	NA	NA	94544836	94550906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
Isoform_10141_5	chr11	+	903	4	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14257	1194	5113	-1194	3prime_fragment	FALSE	canonical	3	18	junction_2	9.67241208569794	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	94841306	94842674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_94841400_94841534_94841726_94841926_94842170_94842298
Isoform_10143_11	chr11	+	4557	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	-49	0	-49	0	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	False	NA	20	True	CATAAA	-16	NA	94881811	94897725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
Isoform_10148_3	chr11	+	2129	8	Fusion	ENSMUSG00000085143.2_ENSMUSG00000038893.13	novel	400	2	NA	NA	-34	-3	multi-exon	FALSE	canonical	0	0	junction_1	21.4637805978122	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGGGTTTTCTGAAT	NA	False	NA	10	True	AATAAA	-12	NA	95201220	95272695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr11_+_95201280_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_10149_5	chr11	+	2146	9	NIC	ENSMUSG00000038893.13	novel	2317	8	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.0997512422418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGGGTTTTCTGAAT	NA	False	NA	10	True	AATAAA	-12	NA	95227843	95272695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95227877_95228044_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_10150_3	chr11	+	2504	9	NIC	ENSMUSG00000038893.13	novel	2317	8	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	25.0199920063936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTTTTCTGAATA	NA	False	NA	11	True	AATAAA	-13	NA	95227843	95272696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95228088_95246491_95246681_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_10151_130	chr11	+	2317	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227843	95272698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_10152_7	chr11	+	2370	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	-53	0	-53	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227790	95272698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
Isoform_10153_93	chr11	+	1307	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	213	3	-1	-3	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGCGAGACCCTGCTGC	NA	False	NA	18	True	AATAAA	-19	NA	95275730	95282599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_10156_3	chr11	+	1562	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	-43	4	-43	-4	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGCGAGACCCTGCTG	NA	False	NA	17	True	AATAAA	-18	NA	95275474	95282598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_10157_23	chr11	+	1281	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	13	5	-2	-5	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGCGAGACCCTGCT	NA	False	NA	16	True	AATAAA	-17	NA	95275729	95282597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_10159_9	chr11	+	1888	8	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	260	junction_3	11.771636613973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGAGACCCTGCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	95275732	95282601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95275940_95276626_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
Isoform_1016_25	chr10	-	2208	16	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	4	15637	4	1157	5prime_fragment	FALSE	canonical	0	0	junction_2	96.5775681339444	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTATGTAGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	62628061	62595877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_10160_13	chr11	+	2480	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	9	392	-6	-392	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304914	95383840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10162_12	chr11	+	2108	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-23	796	-23	-796	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGTGGAAAATGGATT	NA	False	NA	NA	False	GATAAA	-21	NA	95304882	95383436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10165_5	chr11	+	2893	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-15	3	-15	-3	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304890	95384229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10166_3	chr11	+	2423	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-12	-395	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	92.4878370381749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTGGTATCTCTGG	NA	False	NA	2	True	TATAAA	-14	NA	95304893	95383837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10167_6	chr11	+	2120	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-26	-797	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGTGGAAAATGGAT	NA	False	NA	NA	False	GATAAA	-20	NA	95304879	95383435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10169_14	chr11	+	2461	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	20	-392	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304943	95383840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10170_3	chr11	+	2902	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304891	95384229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10172_12	chr11	+	2638	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	33	392	33	-392	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304956	95383840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10173_5	chr11	+	3039	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	22	2	22	-2	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCCTGTCATTGATG	NA	False	NA	NA	False	AATAAA	-18	NA	95304945	95384230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
Isoform_10178_315	chr11	+	1743	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	56	0	3	0	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557838	95571599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
Isoform_10180_1200	chr11	+	1007	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	56	736	3	329	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAAGCGAAGCTTTTAT	NA	False	NA	9	True	AATAAA	-25	NA	95557838	95570863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
Isoform_10188_7	chr11	+	2053	3	FSM	ENSMUSG00000050860.7	ENSMUST00000150134.2	590	3	-24	-1439	-24	0	multi-exon	FALSE	canonical	3	31	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGACTTGTTCTCTTG	2173	False	NA	20	True	AATAAA	-16	NA	95715300	95722966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95715536_95719491_95719602_95721258
Isoform_10189_8	chr11	+	327	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	26	916	26	-916	multi-exon	TRUE	canonical	3	111	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGGCTATTGTATAAG	1052	False	NA	7	True	AATATA	-18	NA	95749716	95750954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95749909_95750819
Isoform_10191_529	chr11	+	932	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	50	22	-16	-22	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTCATTCCAAGT	3247	False	NA	-1	True	AATAAA	-21	NA	95925760	95938234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
Isoform_10192_43	chr11	+	870	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	-43	22	-29	-22	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTCATTCCAAGT	3234	False	NA	-1	True	AATAAA	-21	NA	95925747	95938234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
Isoform_10198_51	chr11	+	2197	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-19	492	3	-1	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGATTTCTGTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	96679965	96698974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
Isoform_10202_4	chr11	+	2370	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	4	3	4	-3	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGATTTCTGTCTT	NA	False	NA	12	True	AATAAA	-13	NA	96679966	96698972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
Isoform_10204_109	chr11	+	920	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	0	10	0	-10	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCAAAGACCTCCTTT	775	False	NA	1	True	AATAAA	-12	NA	96740701	96752019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
Isoform_10206_4	chr11	+	1369	2	FSM	ENSMUSG00000047040.10	ENSMUST00000054311.6	1342	2	-32	5	-32	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCACGGTCTTATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	96820095	96826469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96820336_96825340
Isoform_10207_6	chr11	+	1364	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	-119	-3	-27	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACGGTCTTATTTATAC	NA	False	NA	NA	False	AATAAA	-13	NA	96820100	96826472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96820336_96825343
Isoform_10208_3	chr11	+	2766	6	FSM	ENSMUSG00000078700.11	ENSMUST00000135825.9	2801	6	31	4	7	-4	multi-exon	TRUE	canonical	1	2	junction_3	5.35163526410386	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCCAAAAAACAAAAAACAA	4818	False	NA	NA	False	NA	NA	NA	96835021	96855882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96835041_96835670_96835920_96843406_96843555_96850379_96851108_96851686_96851823_96854396
Isoform_10209_43	chr11	+	3613	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	16	-8	16	5	multi-exon	FALSE	canonical	3	16	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCTTTGTTTGTCTTC	NA	False	NA	8	True	AATAAA	-18	NA	96909574	96915565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96909854_96912231
Isoform_1021_7	chr10	-	2085	15	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-50	18974	-50	-2180	5prime_fragment	FALSE	canonical	0	0	junction_1	99.6492829469271	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAATGTAGACATATAT	NA	False	NA	NA	False	AATGAA	-6	NA	62628115	62599214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_10212_120	chr11	+	1521	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	10	-1	-4	1	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATCTCAAGTCTATTG	NA	False	NA	18	True	AATAAA	-24	NA	96920773	96924785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_10213_3	chr11	+	1347	7	NIC	ENSMUSG00000020877.12	novel	1530	8	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	43.8422044255178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGAACTGGATCTCAA	NA	False	NA	10	True	AATAAA	-16	NA	96920765	96924777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_96920882_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_10214_7	chr11	+	1701	7	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	187	2	-9	-2	3prime_fragment	FALSE	canonical	3	80	junction_4	17.8551268703293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGATCTCAAGTCTA	NA	False	NA	15	True	AATAAA	-21	NA	96920950	96924782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_10216_168	chr11	+	1665	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	35	8	0	-8	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCCTGCCTATGTTTA	908	False	NA	2	True	NA	NA	NA	96932420	96940031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
Isoform_10219_35	chr11	+	1510	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGCCTATGTTTATA	895	False	NA	4	True	NA	NA	NA	96932407	96940033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
Isoform_1022_3	chr10	-	6223	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	132	-86	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAACGAAAAAAAAG	NA	False	NA	-1	True	NA	NA	NA	62728633	62648486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_10222_3	chr11	+	3761	22	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	163	1	-29	-1	intron_retention	FALSE	canonical	3	35	junction_2	30.9017167771184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGACCACTCATTGA	NA	False	NA	21	True	AATAAA	-17	NA	96941616	96959729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490
Isoform_10223_71	chr11	+	3563	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	208	0	16	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941661	96959730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_10224_3	chr11	+	2213	9	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	9040	2	6436	-2	3prime_fragment	FALSE	canonical	3	42	junction_3	42.4792228624771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	6393	False	NA	20	True	AATAAA	-16	NA	96950685	96959728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_10225_4	chr11	+	1535	5	FSM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	19	-634	19	1	multi-exon	FALSE	canonical	3	78	junction_1	29.0978951128772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGACCACTCATTGAAA	NA	False	NA	23	True	AATAAA	-19	NA	96957727	96959731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_10226_3	chr11	+	1524	3	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	306	-629	306	-4	intron_retention	FALSE	canonical	3	133	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTGTGACCACTCAT	NA	False	NA	18	True	AATAAA	-14	NA	96958014	96959726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96958176_96958259_96958387_96958490
Isoform_10228_7	chr11	+	1403	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	277	-633	277	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96957985	96959730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
Isoform_10231_250	chr11	+	1477	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	141	813	-51	-813	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTGTGTTCTGTACA	NA	False	NA	NA	False	AATAAA	-20	NA	97206682	97219933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
Isoform_10232_23	chr11	+	2294	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	140	-3	-52	3	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCTTAAAATTACTTTA	NA	False	NA	17	True	NA	NA	NA	97206681	97220749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
Isoform_10242_16	chr11	+	2439	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-214	4906	-214	-4906	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTTAGTATTTACATT	NA	False	NA	NA	False	NA	NA	NA	97253046	97284462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_10245_5	chr11	+	5857	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-216	1490	-216	-1490	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	97253044	97287878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_10247_14	chr11	+	2339	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-217	-4907	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTTTAGTATTTACAT	NA	False	NA	NA	False	NA	NA	NA	97253043	97284461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_10248_3	chr11	+	5680	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-141	-1490	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	97253119	97287878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_10249_3	chr11	+	5742	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-203	-1490	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	97253057	97287878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
Isoform_10252_6	chr11	+	2491	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-30	2258	-30	1604	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97489306	97511461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_97489494_97505749_97505855_97509262
Isoform_10255_7	chr11	+	552	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-16	76	-16	-76	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGGGAGTGAAAAAATTC	NA	False	NA	16	True	AATAAA	-26	NA	97489320	97513643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
Isoform_10256_5	chr11	+	615	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	29	True	AATATA	-14	NA	97489333	97513719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
Isoform_10257_3	chr11	+	678	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-69	3	-69	-3	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	26	True	AATATA	-11	NA	97489267	97513716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
Isoform_10258_5	chr11	+	1640	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-13	-1015	-13	1015	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTGGAGAATCAAAAAT	NA	False	NA	23	True	AATAAA	-24	NA	97489323	97514734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
Isoform_10259_233	chr11	+	729	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	7	1	7	-1	multi-exon	FALSE	canonical	3	940	junction_1	75.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTGTTTCTGTGGTCA	2459	False	NA	-2	True	AATAAA	-20	NA	97576785	97579446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97577042_97577326_97577447_97579093
Isoform_10260_6	chr11	+	876	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	-140	1	-13	-1	multi-exon	FALSE	canonical	3	940	junction_1	75.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTGTTTCTGTGGTCA	2312	False	NA	-2	True	AATAAA	-20	NA	97576638	97579446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97577042_97577326_97577447_97579093
Isoform_10262_240	chr11	+	756	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	11	-1	11	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594235	97604327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
Isoform_10263_4091	chr11	+	732	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	35	-1	0	1	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594259	97604327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
Isoform_10272_8	chr11	+	3425	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	106	9	-1	-9	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCGGACTAGGCTTCT	4562	False	NA	1	True	AATAAA	-12	NA	97690496	97729581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
Isoform_10275_7140	chr11	+	703	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	33	15	0	-15	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	7140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917782	97921303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
Isoform_1028_8	chr10	-	4410	4	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	121	921	combination_of_known_junctions	FALSE	canonical	3	182	junction_3	31.4572019664107	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTCACTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	62728644	62673954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62676158_62700586_62700641_62713930_62715913_62728473
Isoform_10284_4	chr11	+	1768	2	ISM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-514	36187	-259	-15005	5prime_fragment	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGGAAAGAGCAGC	NA	False	NA	NA	False	NA	NA	NA	98093625	98101343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_98095237_98101186
Isoform_10285_15	chr11	+	2002	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	34.185344156554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAAATGCAG	924	False	NA	-8	True	ATTAAA	-8	NA	98249242	98271919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_10286_10	chr11	+	2015	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	27	-15	combination_of_known_junctions	TRUE	canonical	3	18	junction_4	34.185344156554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATGAAATAAAAAATA	902	False	NA	-17	True	NA	NA	NA	98249220	98271910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_10287_5	chr11	+	2325	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	18	junction_4	35.2438672326803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGTGATGGTGCATTCC	926	False	NA	10	True	AATAAA	-13	NA	98249244	98271937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_10288_158	chr11	+	2036	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	28	6	28	-6	multi-exon	FALSE	canonical	3	120	junction_11	11.573412528335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAAATGCAG	903	False	NA	-8	True	ATTAAA	-8	NA	98249221	98271919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
Isoform_10290_8	chr11	+	2962	14	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	0	-19	intron_retention	FALSE	canonical	3	120	junction_11	11.8071285257538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAACATGAAATAAAA	938	False	NA	-21	True	NA	NA	NA	98249256	98271906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
Isoform_10291_3	chr11	+	2242	15	ISM	ENSMUSG00000062312.6	ENSMUST00000136032.2	4431	26	-25	7947	-2	1558	5prime_fragment	FALSE	canonical	3	26	junction_8	12.9496670826327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGAGTACACAGTTGCT	9035	False	NA	NA	False	NA	NA	NA	98303293	98319956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649
Isoform_10292_4	chr11	+	4574	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-18	456	-18	183	multi-exon	TRUE	canonical	3	26	junction_8	10.5841234232719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTCTGAGAGTGGTC	9019	False	NA	NA	False	NA	NA	NA	98303277	98328086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_10293_11	chr11	+	4468	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	2	542	2	97	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAGAGTGGGTGTTATA	9039	False	NA	56	True	NA	NA	NA	98303297	98328000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
Isoform_10294_93	chr11	+	2180	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	217	0	3	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337876	98346199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_10296_8	chr11	+	2368	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	29	0	29	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337688	98346199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_10297_5	chr11	+	2081	14	NIC	ENSMUSG00000019312.11	novel	2397	15	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	16.0984397788609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATCTGTGAGTCCTGT	NA	False	NA	12	True	AATAAA	-12	NA	98337870	98346193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
Isoform_10298_3	chr11	+	1671	12	FSM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	0	1055	0	-1055	multi-exon	FALSE	canonical	0	0	junction_2	1.46586504514519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTTTGAGTCACTTCA	4001	False	NA	NA	False	NA	NA	NA	98555176	98567479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98555265_98556881_98557101_98557276_98557458_98560444_98560611_98561582_98561680_98562143_98562192_98562556_98562584_98563120_98563142_98563801_98563957_98564431_98564547_98566698_98566773_98566999
Isoform_10301_6663	chr11	+	2134	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	12	2	1	-2	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	6663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573391	98586803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_10302_86	chr11	+	2158	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	-11	1	-11	-1	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	15	True	AATAAA	-13	NA	98573368	98586804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_10309_88	chr11	+	2397	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1019	junction_3	100.383066301045	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGTGCACGGTGTCA	NA	False	NA	15	True	AATAAA	-13	NA	98573391	98586804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
Isoform_10315_6	chr11	+	2227	10	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	28	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	14.2785343509016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	5145	False	NA	NA	False	TATAAA	-20	NA	98631491	98655940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98631514_98632183_98632274_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10316_7	chr11	+	2393	11	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.6476835346322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	5119	False	NA	28	True	NA	NA	NA	98631465	98659831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98631514_98632183_98632274_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_10317_4	chr11	+	2032	10	NIC	ENSMUSG00000058756.14	novel	378	4	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.9377946878833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGCCTCCTCCAG	5131	False	NA	28	True	NA	NA	NA	98631477	98659831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98631514_98632183_98632274_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_10318_3	chr11	+	2171	9	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.9233392187363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	5111	False	NA	NA	False	TATAAA	-20	NA	98631457	98655940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98631514_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10319_20	chr11	+	2311	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	-62	-3	0	3	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6290	False	NA	NA	False	TATAAA	-20	NA	98632636	98655940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10320_20	chr11	+	2359	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	-110	-3	-48	3	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6242	False	NA	NA	False	TATAAA	-20	NA	98632588	98655940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10321_30	chr11	+	2241	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	6	-1	6	1	multi-exon	FALSE	canonical	3	10	junction_1	12.2519131159179	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAACAAAAAACA	6358	False	NA	NA	False	TATAAA	-18	NA	98632704	98655938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10322_61	chr11	+	2448	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	0	4	0	-4	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGCGTGTGCCTCCTC	6290	False	NA	25	True	NA	NA	NA	98632636	98659828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_10324_9	chr11	+	2512	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	-64	4	-64	-4	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGCGTGTGCCTCCTC	6226	False	NA	25	True	NA	NA	NA	98632572	98659828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_10325_8	chr11	+	2329	10	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	11.7104996677826	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCGTGTGCCTCCTCC	6293	False	NA	26	True	NA	NA	NA	98632639	98659829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98659099
Isoform_10327_5	chr11	+	2182	9	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	13.5410256258527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6615	False	NA	NA	False	TATAAA	-20	NA	98632961	98655940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98633029_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
Isoform_10328_7	chr11	+	2320	10	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.8082392814704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCGTGTGCCTCCTCC	6615	False	NA	26	True	NA	NA	NA	98632961	98659829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98633029_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
Isoform_10329_5	chr11	+	1143	2	ISM	ENSMUSG00000058756.14	ENSMUST00000124072.2	1240	9	9893	3292	9893	0	internal_fragment	FALSE	canonical	3	50	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAACAAAAAAC	7541	False	NA	NA	False	TATAAA	-17	NA	98654304	98655937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_98654614_98655103
Isoform_10331_7	chr11	+	2395	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	-309	5	-34	-5	multi-exon	FALSE	canonical	3	46	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAAGGACTATCTTGG	296	False	NA	NA	False	AATAAA	-23	NA	98686307	98691873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98687431_98689965_98690190_98690825
Isoform_10332_18	chr11	+	3155	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	0	1438	0	-13	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGATAAAAAAGAAAAAAA	330	False	NA	NA	False	NA	NA	NA	98686341	98697247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
Isoform_10335_73	chr11	+	3697	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	44	0	44	0	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	326	False	NA	14	True	AATAAA	-19	NA	98700677	98724632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
Isoform_10336_3	chr11	+	2704	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	4	1033	4	-1033	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTCTTTATTAGTCTT	286	False	NA	NA	False	NA	NA	NA	98700637	98723599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
Isoform_10337_3	chr11	+	2519	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	18	1204	18	-1204	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTAATGTTTTTAGTT	300	False	NA	NA	False	TTTAAA	-17	NA	98700651	98723428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
Isoform_10342_515	chr11	+	2549	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	19	2046	19	-3	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTGGGCTGCAT	36	False	NA	5	True	AATATA	-14	NA	98798645	98812716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_10355_53	chr11	+	2552	12	NIC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	177.064586432734	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	32	False	NA	7	True	AATATA	-16	NA	98798641	98812718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
Isoform_10362_32	chr11	+	2394	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	8792	False	NA	6	True	NA	NA	NA	98818629	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_10365_8	chr11	+	2485	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-16	0	-16	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98828507	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_10368_6	chr11	+	2740	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	-282	780	-282	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7156	False	NA	6	True	NA	NA	NA	98850955	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_10369_189	chr11	+	2416	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	42	780	42	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7480	False	NA	6	True	NA	NA	NA	98851279	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_1037_33	chr10	-	1442	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	5	766	5	1	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5786	False	NA	-8	True	AATAAA	-13	NA	62859668	62851208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_10370_124	chr11	+	2445	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	13	780	13	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7451	False	NA	6	True	NA	NA	NA	98851250	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_10373_12	chr11	+	3199	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	36	3	36	-3	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	7474	False	NA	11	True	AATAAA	-16	NA	98851273	98865765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_10378_13	chr11	+	2083	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	11	1737	11	735	multi-exon	FALSE	canonical	2	10	junction_3	1.69967317119759	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTTTGTTTGATTT	4240	False	NA	28	True	AAAAAG	-9	NA	98932080	98943481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
Isoform_10380_836	chr11	+	659	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	562	101	1	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTAGTCTTGAAGTC	4058	False	NA	0	True	AATAAA	-14	NA	100210811	100212360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
Isoform_10381_640	chr11	+	1218	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	3	101	-3	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCTGATGTCCAGATTG	4058	False	NA	18	True	AATAAA	-14	NA	100210811	100212919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
Isoform_10386_113	chr11	+	582	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	51	-186	51	2	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4641	False	NA	1	True	AATAAA	-15	NA	100211394	100212361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100211656_100211773_100211876_100212142
Isoform_10387_107	chr11	+	1140	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	51	-744	51	-3	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCTGATGTCCAGATTG	4641	False	NA	18	True	AATAAA	-14	NA	100211394	100212919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100211656_100211773_100211876_100212142
Isoform_1039_4	chr10	-	1500	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5810	False	NA	-8	True	AATAAA	-13	NA	62859644	62851208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
Isoform_10396_94	chr11	+	2573	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	19	-8	19	8	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGACAGATGTCTGGT	NA	False	NA	21	True	AATAAA	-22	NA	100306541	100315658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
Isoform_10397_3	chr11	+	2289	9	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	4668	1	-59	-1	3prime_fragment	FALSE	canonical	3	18	junction_3	6.35904867098845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTCCAGAAGTGGACAG	NA	False	NA	12	True	AATAAA	-13	NA	100311190	100315649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
Isoform_10399_10	chr11	+	961	3	ISM	ENSMUSG00000001558.6	ENSMUST00000001599.4	2017	5	5469	-7	5459	7	3prime_fragment	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGGAAAATGTTCAACT	3801	False	NA	NA	False	AATAAA	-23	NA	100338211	100347855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100338565_100347109_100347260_100347397
Isoform_1040_12	chr10	-	1313	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	318	2	-5	1	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5776	False	NA	-8	True	AATAAA	-13	NA	62859678	62851208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
Isoform_10400_6	chr11	+	2117	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	121	2	18	-2	multi-exon	FALSE	canonical	2	3	junction_1	9.12538915733062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	100436553	100462787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
Isoform_10401_4	chr11	+	2057	11	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	4074	3	134	-3	3prime_fragment	FALSE	canonical	3	16	junction_2	6.19354502688081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATCTTGAGTGACACTG	NA	False	NA	NA	False	ATTAAA	-19	NA	100440506	100462786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
Isoform_10402_4	chr11	+	2242	11	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	3892	0	-48	0	3prime_fragment	FALSE	canonical	3	16	junction_2	6.19354502688081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGACACTGTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	100440324	100462789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
Isoform_10403_163	chr11	+	2288	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	69	0	69	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465798	100472554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
Isoform_10404_69	chr11	+	2311	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	46	0	46	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465775	100472554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
Isoform_10407_33	chr11	+	1964	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTCCCGTCCCCTAC	NA	False	NA	13	True	AATAAA	-20	NA	100513738	100518429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
Isoform_1041_27	chr10	-	1397	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	5	766	5	1	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5786	False	NA	-8	True	AATAAA	-13	NA	62859668	62851208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_10410_837	chr11	+	2056	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	37	4	-7	-4	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTCCCGTCCCCTAC	NA	False	NA	13	True	AATAAA	-20	NA	100513738	100518429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
Isoform_10415_9	chr11	+	3909	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	571	6	-118	-5	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100751052	100775989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_10416_30	chr11	+	3659	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	821	6	-7	-5	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACCAGTCTGCTTCCT	NA	False	NA	8	True	AATAAA	-25	NA	100751302	100775989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_10419_5	chr11	+	1959	4	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	21064	0	1701	0	3prime_fragment	FALSE	canonical	3	39	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	False	NA	14	True	AATAAA	-31	NA	100771545	100775995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100772012_100772563_100772616_100772887_100772993_100774659
Isoform_1042_4	chr10	-	2184	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	-1	-15	-1	15	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5780	False	NA	0	True	AATAAA	-30	NA	62859674	62850427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
Isoform_10420_6	chr11	+	1903	3	ISM	ENSMUSG00000004043.15	ENSMUST00000107357.4	3605	18	20241	-2	1706	1	3prime_fragment	FALSE	canonical	3	8	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGCTTCCTGGTTTAC	NA	False	NA	15	True	AATAAA	-32	NA	100771550	100775996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100772012_100772887_100772993_100774659
Isoform_10421_8	chr11	+	3988	22	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	56.386100151096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900313	100954540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
Isoform_10422_13	chr11	+	3967	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	39	-1290	4	1	multi-exon	FALSE	canonical	3	25	junction_5	41.6171839508634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900316	100954540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
Isoform_10423_4	chr11	+	885	7	ISM	ENSMUSG00000019302.17	ENSMUST00000154896.8	4162	16	31	17324	-4	-1	5prime_fragment	FALSE	canonical	3	165	junction_5	19.5256241897666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGAAAGCTTACTCCC	NA	False	NA	NA	False	ATTAAA	-19	NA	100900308	100918325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092
Isoform_10424_7	chr11	+	2318	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	35	18886	35	1	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGTCGTGATTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100900347	100935653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
Isoform_10425_19	chr11	+	3970	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	33	5	-2	1	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGCCTGTCTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	100900310	100954540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
Isoform_10426_104	chr11	+	3954	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGCCTGTCTCTGAGT	NA	False	NA	14	True	AATAAA	-19	NA	100900310	100954542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
Isoform_10427_3	chr11	+	3887	20	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	45.3592615005813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAAAGCTGCCTGTCTC	NA	False	NA	9	True	AATAAA	-14	NA	100900264	100954537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
Isoform_10428_26	chr11	+	2458	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	82	20	82	-20	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCCTATTACATTAAA	NA	False	NA	3	True	AATAAA	-13	NA	100960919	100968478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
Isoform_10429_3	chr11	+	2353	6	NIC	ENSMUSG00000001751.10	novel	2560	6	NA	NA	101	-20	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	5.95315042645489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCCTATTACATTAAA	NA	False	NA	3	True	AATAAA	-13	NA	100960938	100968478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964758_100964930_100967066
Isoform_1043_4	chr10	-	1193	8	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	5	4	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	172.168877701458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5786	False	NA	-2	True	AATAAA	-19	NA	62859668	62851202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853819_62854005_62855171_62855307_62859498
Isoform_10430_4	chr11	+	899	3	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	729	13	729	-13	3prime_fragment	FALSE	canonical	3	10	junction_1	7	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATCATGTATCATGTG	86	False	NA	NA	False	NA	NA	NA	100969965	100971340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100970109_100970485_100970661_100970759
Isoform_10431_6	chr11	+	788	2	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	1223	7	1223	-7	3prime_fragment	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTATCATGTGGAGGGG	580	False	NA	NA	False	NA	NA	NA	100970459	100971346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_100970661_100970759
Isoform_10432_168	chr11	+	2051	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	86	1	26	-1	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3597	False	NA	24	True	ATTAAA	-15	NA	100973476	100977444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_10433_3	chr11	+	2651	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	37	1	intron_retention	FALSE	canonical	3	106	junction_1	25.4972424979644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGTTTTCTGTTT	3608	False	NA	26	True	ATTAAA	-17	NA	100973487	100977446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_10434_3	chr11	+	2864	8	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	106	junction_1	27.0207780972272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTGTGGTTTTCTG	3561	False	NA	23	True	ATTAAA	-14	NA	100973440	100977443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976714_100976823_100976971_100977073
Isoform_10436_13	chr11	+	1379	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3561	False	NA	24	True	ATTAAA	-15	NA	100973440	100977444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_10437_56	chr11	+	2387	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	-2	1	-2	-1	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3569	False	NA	24	True	ATTAAA	-15	NA	100973448	100977444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
Isoform_1044_4	chr10	-	1142	8	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	179.751302115575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTTGCTACTT	5786	False	NA	-8	True	AATAAA	-13	NA	62859668	62851208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853864_62854005_62855171_62855307_62859498
Isoform_10440_47	chr11	+	1798	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	26	2	-1	-2	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGTTTTAAGTCCTT	8249	False	NA	16	True	AATAAA	-20	NA	100978128	100983031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
Isoform_10442_84	chr11	+	1962	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	3	0	-1	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8249	False	NA	18	True	AATAAA	-22	NA	100978128	100983033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
Isoform_10444_3	chr11	+	1867	7	NIC	ENSMUSG00000017801.16	novel	1965	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	96.0913916828951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGTTTTAAGTCCTT	8252	False	NA	16	True	AATAAA	-20	NA	100978131	100983031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_100978356_100978579_100978617_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
Isoform_10445_30	chr11	+	1775	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	21	6	21	-6	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCCACCCCCCGGTC	1251	False	NA	10	True	AATAAA	-13	NA	101010784	101017239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_10446_368	chr11	+	1595	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	201	6	201	-6	multi-exon	FALSE	canonical	3	373	junction_8	104.461715475096	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCCACCCCCCGGTC	1431	False	NA	10	True	AATAAA	-13	NA	101010964	101017239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_10448_14	chr11	+	1726	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	179	-6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	211.726450874708	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCCACCCCCCGGTC	1409	False	NA	10	True	AATAAA	-13	NA	101010942	101017239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013389_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
Isoform_10449_6	chr11	+	1746	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	9	-1	9	1	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTTTGTTTGTGACTC	1660	False	NA	NA	False	AATAAA	-23	NA	101046741	101052614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
Isoform_1045_8	chr10	-	2306	4	FSM	ENSMUSG00000020067.9	ENSMUST00000218978.2	1833	4	10	-483	10	1	multi-exon	FALSE	canonical	3	18	junction_3	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCATGT	NA	False	NA	NA	False	AATAAA	-13	NA	62958453	62951572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680
Isoform_10450_8	chr11	+	1097	6	FSM	ENSMUSG00000078656.12	ENSMUST00000107280.11	876	6	2	-223	2	1	multi-exon	FALSE	canonical	3	35	junction_2	474.329252734849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144562	101150372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101144634_101144856_101145003_101145744_101145823_101146834_101146924_101147703_101147780_101149735
Isoform_10451_15	chr11	+	592	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	23	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	475.771541813926	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTGTGACTCTTTA	NA	False	NA	1	True	AGTAAA	-17	NA	101144555	101148875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
Isoform_10452_5	chr11	+	1223	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	-2	-1	-2	1	multi-exon	FALSE	canonical	3	11	junction_5	486.921595331322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144552	101150372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
Isoform_10453_422	chr11	+	1082	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	22	2	0	2	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101144554	101150373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
Isoform_10454_7	chr11	+	993	5	FSM	ENSMUSG00000078656.12	ENSMUST00000144306.9	361	5	-1	-631	0	2	multi-exon	FALSE	canonical	3	19	junction_3	527.253733983933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101144554	101150373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101147703_101147780_101149735
Isoform_10455_8	chr11	+	2326	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	8	1	8	-1	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTATTGTAAACAT	NA	False	NA	8	True	AATAAA	-13	NA	101169929	101179526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
Isoform_10457_35	chr11	+	2719	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207057	101214362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_10459_1081	chr11	+	2631	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	20	13	20	-13	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAAGCTGCAGACCCTG	NA	False	NA	21	True	ATTAAA	-22	NA	101207058	101214350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_1046_10	chr10	-	2698	9	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	0	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3869167005964	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATCTTGTATCTCCAT	NA	False	NA	NA	False	AATAAA	-23	NA	66932724	66847652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_10465_48	chr11	+	2540	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	427.085471539363	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207057	101214363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
Isoform_10467_208	chr11	+	3196	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	7	20	7	-20	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	15	True	AATAAA	-19	NA	101315917	101326479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
Isoform_10469_6	chr11	+	3731	4	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	7	-20	intron_retention	FALSE	canonical	3	54	junction_2	2.35702260395516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTGCAAAGCCCATA	NA	False	NA	15	True	AATAAA	-19	NA	101315917	101326479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101316437_101320277_101320437_101322173_101323025_101324277
Isoform_1047_3	chr10	-	4545	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-19	-857	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.3869167005964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	66932743	66845824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_10471_5297	chr11	+	475	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	120	19	-20	-19	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	5297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2361	False	NA	43	True	NA	NA	NA	101333243	101336336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_10478_175	chr11	+	730	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-17	19	-9	-19	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2372	False	NA	43	True	NA	NA	NA	101333254	101336336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_10479_1387	chr11	+	700	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	13	19	13	-19	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAT	2402	False	NA	43	True	NA	NA	NA	101333284	101336336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
Isoform_10486_37	chr11	+	1112	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	15	235	15	-1	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTGTGATGGTCTTCT	996	False	NA	4	True	NA	NA	NA	101339247	101349289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
Isoform_10487_3	chr11	+	1385	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	-14	-9	-14	9	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGCAACTCTCAGATA	967	False	NA	NA	False	NA	NA	NA	101339218	101349533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
Isoform_10489_5	chr11	+	1322	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	252	-743	252	-5	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	8546	False	NA	16	True	AATAAA	-16	NA	101356561	101362674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_1049_35	chr10	-	939	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	0	4491	0	-2008	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTCTAACCTGATGTA	NA	False	NA	-8	True	AATAAA	-18	NA	66932724	66849458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_10490_4	chr11	+	1376	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	196	-741	196	-7	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGCTATGGACTTAG	8490	False	NA	14	True	AATAAA	-14	NA	101356505	101362672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_10491_3	chr11	+	1548	5	FSM	ENSMUSG00000001313.13	ENSMUST00000134980.2	831	5	26	-743	26	-5	multi-exon	FALSE	canonical	3	18	junction_1	62.3097103186975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	8320	False	NA	16	True	AATAAA	-16	NA	101356335	101362674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_10492_20	chr11	+	1351	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	38	5	38	-5	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	101359038	101362674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
Isoform_10494_5	chr11	+	4328	25	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	55.70358057512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGCTGTTTATTGT	988	False	NA	17	True	AATAAA	-20	NA	101443693	101472773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_10495_37	chr11	+	4440	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	213	1	0	-1	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCTGTTTATTGTTTA	987	False	NA	20	True	AATAAA	-23	NA	101443692	101472776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_10496_37	chr11	+	4324	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	9	6	0	-6	multi-exon	TRUE	canonical	3	94	junction_16	37.5030852725303	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	987	False	NA	15	True	AATAAA	-18	NA	101443692	101472771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
Isoform_10497_11	chr11	+	4220	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-4	intron_retention	FALSE	canonical	3	41	junction_21	53.0816766793681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGCTGTTTATTGT	987	False	NA	17	True	AATAAA	-20	NA	101443692	101472773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
Isoform_10498_3	chr11	+	4264	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-6	intron_retention	FALSE	canonical	3	12	junction_20	58.2924832670746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	989	False	NA	15	True	AATAAA	-18	NA	101443694	101472771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
Isoform_10499_11	chr11	+	2299	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	1	4	1	-4	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGGAAAAGGGGCATTCC	3689	False	NA	NA	False	AATAAA	-13	NA	101473068	101482610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
Isoform_10501_466	chr11	+	1096	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	13	15	13	13	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518780	101526911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
Isoform_10502_6	chr11	+	2178	5	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	13	13	intron_retention	FALSE	canonical	3	866	junction_1	143.28817117962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518780	101526911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613
Isoform_10503_27	chr11	+	1304	6	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	13	13	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518780	101526911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
Isoform_10506_26	chr11	+	1361	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	20	1	20	-1	multi-exon	FALSE	canonical	3	45	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTGATCTGGTAAC	2570	False	NA	NA	False	ATTAAA	-17	NA	101556386	101558657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101556464_101557373
Isoform_10509_3	chr11	+	5939	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	33	-1647	33	1647	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTGGTGCCTTTTAC	NA	False	NA	NA	False	NA	NA	NA	101623808	101659831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_1051_5	chr10	-	1301	6	NIC	ENSMUSG00000019873.9	novel	838	3	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	65.7346179725721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGGGTTGACATCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	66932729	66864710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_66865466_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
Isoform_10510_120	chr11	+	4244	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	79	2	0	-2	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTTTATTATGACT	NA	False	NA	24	True	NA	NA	NA	101623854	101658182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_10512_3	chr11	+	3893	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	33	399	33	152	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTCTTCATAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	101623808	101657785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
Isoform_10513_40	chr11	+	2082	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-54	0	-18	0	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTCTCAAAAACCATC	NA	False	NA	12	True	NA	NA	NA	102036320	102040303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
Isoform_10514_23	chr11	+	1522	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	48	3	-38	-3	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTTTTCTTGTCTGTG	NA	False	NA	2	True	AATAAA	-16	NA	102080542	102084904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
Isoform_10515_30	chr11	+	1393	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	179	1	22	-1	multi-exon	FALSE	canonical	3	149	junction_4	4.31740662898458	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTCTTGTCTGTGCT	NA	False	NA	4	True	AATAAA	-18	NA	102080673	102084906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
Isoform_10518_10	chr11	+	881	2	ISM	ENSMUSG00000034773.17	ENSMUST00000133930.8	2813	11	-11	13850	-11	-9277	5prime_fragment	FALSE	canonical	3	336	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAGAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	102139696	102142163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_102139919_102141504
Isoform_1052_65	chr10	-	1803	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	8	2	8	-2	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121076	67102469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
Isoform_10520_897	chr11	+	2557	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-17	7	-17	-7	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCCTCCGTCCCAC	NA	False	NA	8	True	AATAAA	-15	NA	102139690	102156006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
Isoform_10526_4	chr11	+	1984	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7796	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.0504472113883	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAACGTGTGGACATT	3511	False	NA	NA	False	AATAAA	-13	NA	102167364	102170280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_102167698_102168003_102168118_102168701_102168940_102168981
Isoform_10527_22	chr11	+	2117	3	ISM	ENSMUSG00000034768.5	ENSMUST00000036467.5	2843	5	7708	5	7708	-5	3prime_fragment	FALSE	canonical	3	26	junction_2	14	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGTGTGGACATTGTA	3423	False	NA	NA	False	AATAAA	-16	NA	102167276	102170283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_102167698_102168003_102168118_102168701
Isoform_10528_3	chr11	+	1880	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7920	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.0504472113883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAACGTGTGGACATT	3635	False	NA	NA	False	AATAAA	-13	NA	102167488	102170280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_102167698_102168003_102168118_102168701_102168939_102168960
Isoform_1053_8	chr10	-	1852	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-41	2	-41	-2	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121125	67102469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
Isoform_10530_24	chr11	+	1907	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	30	2	10	-2	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175786	102180061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
Isoform_10531_4	chr11	+	2046	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	81	-188	61	188	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGCGTGAGCCCCAC	NA	False	NA	NA	False	AATAAA	-14	NA	102175837	102180251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
Isoform_10533_13	chr11	+	1884	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	-10	2	-2	-2	multi-exon	FALSE	canonical	3	43	junction_1	44	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175754	102180061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102175915_102178133_102178698_102178901
Isoform_10534_32	chr11	+	2257	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-10	2	-10	-2	multi-exon	FALSE	canonical	3	94	junction_1	18.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102176011	102180061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102176545_102178133_102178698_102178901
Isoform_10536_4	chr11	+	2470	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-218	-3	27	3	multi-exon	FALSE	canonical	3	94	junction_1	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTTGTGACTGCTCT	NA	False	NA	19	True	AATAAA	-21	NA	102175803	102180066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102176545_102178133_102178698_102178901
Isoform_10538_3	chr11	+	1933	11	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	135	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	68.3318373819993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7544	False	NA	12	True	AATAAA	-14	NA	102284363	102293379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291462_102291625_102291719_102291827_102292806
Isoform_10540_13	chr11	+	1698	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107102.8	1837	11	138	1	138	-1	multi-exon	FALSE	canonical	3	49	junction_10	57.4930430573996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGGGAGACAGAGACA	7547	False	NA	10	True	NA	NA	NA	102284366	102292579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
Isoform_10541_100	chr11	+	1914	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	131	1	131	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7540	False	NA	13	True	AATAAA	-15	NA	102284359	102293380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10542_11	chr11	+	2026	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	19	1	19	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7428	False	NA	13	True	AATAAA	-15	NA	102284247	102293380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10543_36	chr11	+	1963	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	82	1	82	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7491	False	NA	13	True	AATAAA	-15	NA	102284310	102293380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10545_3	chr11	+	2042	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	108	-3	intron_retention	FALSE	canonical	3	182	junction_1	28.2204723866982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTTTCATCTGTTGG	7517	False	NA	11	True	AATAAA	-13	NA	102284336	102293378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10546_4	chr11	+	2033	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	108	-3	intron_retention	FALSE	canonical	3	171	junction_6	30.4233503564874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTTTCATCTGTTGG	7517	False	NA	11	True	AATAAA	-13	NA	102284336	102293378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10547_6	chr11	+	2124	9	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	126	-1	intron_retention	FALSE	canonical	3	182	junction_1	27.8542523683548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7535	False	NA	13	True	AATAAA	-15	NA	102284354	102293380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10548_10	chr11	+	1919	11	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	63.1901891119183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7520	False	NA	13	True	AATAAA	-15	NA	102284339	102293380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
Isoform_10553_4	chr11	+	951	4	NIC	ENSMUSG00000006575.15	novel	866	5	NA	NA	83	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	110.836215501372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTTTCATCTGTTGG	5266	False	NA	11	True	AATAAA	-13	NA	102290472	102293378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102290607_102291486_102291625_102291719_102291827_102292806
Isoform_10555_940	chr11	+	2150	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	185	-4	-11	2	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGATTTGTTGCGCCA	4323	False	NA	19	True	AATAAA	-21	NA	102321332	102327637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
Isoform_10561_3	chr11	+	4545	8	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.6999904634709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTTAGTTTCATTTT	NA	False	NA	2	True	AATAAA	-12	NA	102556380	102573062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
Isoform_10562_4	chr11	+	4619	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	-48	2	-48	-2	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTTTAGTTTCATTT	NA	False	NA	1	True	AATAAA	-11	NA	102556365	102573061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
Isoform_10565_138	chr11	+	1852	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	203	2806	-36	-2806	multi-exon	TRUE	canonical	3	928	junction_6	43.300411312535	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATATTCTAAATATCTT	NA	False	NA	15	True	AATAAA	-21	NA	102919374	102956932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
Isoform_10567_35	chr11	+	2191	11	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_2	40.6811995889993	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992534	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10568_93	chr11	+	2056	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	27	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992534	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10569_19	chr11	+	2254	11	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	42	junction_2	36.0373417443629	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992520	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102992615_102993507_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_1057_3	chr10	-	4274	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	-18	3	-18	-3	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGGTCTGTTCCTTC	NA	False	NA	-2	True	AATAAA	-17	NA	67748510	67721935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
Isoform_10570_8	chr11	+	2110	10	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	44	junction_2	34.5350063944784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992528	103003025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102992615_102993507_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10571_12	chr11	+	2502	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	68	junction_1	25.5477494116409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992517	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10573_3	chr11	+	1614	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	12	junction_3	51.2445119012758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993883	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102993923_102994060_102994196_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10576_32	chr11	+	1739	10	NIC	ENSMUSG00000056938.17	novel	807	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	42	junction_1	35.1346615814703	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993928	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10577_3	chr11	+	1618	9	NIC	ENSMUSG00000056938.17	novel	900	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_3	47.4919401056642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993928	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10578_37	chr11	+	1604	9	NIC	ENSMUSG00000056938.17	novel	807	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993928	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10579_8	chr11	+	1486	8	NIC	ENSMUSG00000056938.17	novel	807	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	12	junction_2	49.0289377275694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993925	103003026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102993972_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_1058_11	chr10	-	918	6	ISM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-159	5491	-159	-5491	5prime_fragment	TRUE	canonical	3	87	junction_5	23.2292918531754	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGAAAGAAAAAGAG	NA	False	NA	NA	False	AATAAA	-44	NA	67972615	67937774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
Isoform_10580_4	chr11	+	1819	9	NIC	ENSMUSG00000056938.17	novel	961	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	67	junction_1	25.8163586704245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACCTCAGTCTGCTGTC	NA	False	NA	-4	True	ATTAAA	-6	NA	102993927	103003016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
Isoform_10581_3	chr11	+	1190	3	FSM	ENSMUSG00000043372.13	ENSMUST00000124928.2	654	3	0	-536	0	-9	multi-exon	FALSE	canonical	1	1	junction_1	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCCAGTGAGAGTGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	103024164	103030008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103024249_103024857_103024968_103029012
Isoform_10582_4	chr11	+	1926	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	-705	0	20	multi-exon	FALSE	canonical	3	13	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAAGGTTAGTGGTGG	NA	False	NA	10	True	AATAAA	-17	NA	103024139	103030722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103024249_103024860_103024968_103029012
Isoform_10583_9	chr11	+	1238	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	-17	0	17	multi-exon	FALSE	canonical	3	13	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCACTGGGGCTCTTC	NA	False	NA	NA	False	ATTAAA	-35	NA	103024139	103030034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103024249_103024860_103024968_103029012
Isoform_10584_6	chr11	+	1928	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	6	-24	6	24	multi-exon	FALSE	canonical	3	4	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTAGTGGTGGCAGT	NA	False	NA	14	True	AATAAA	-21	NA	103024176	103030726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103024284_103024860_103024968_103029012
Isoform_10585_7	chr11	+	1242	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	0	668	0	17	multi-exon	FALSE	canonical	3	4	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCACTGGGGCTCTTC	NA	False	NA	NA	False	ATTAAA	-35	NA	103024170	103030034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103024284_103024860_103024968_103029012
Isoform_10586_5	chr11	+	2518	3	NNC	ENSMUSG00000043372.13	novel	1910	3	NA	NA	-2	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAAAGGTTAGTGGTG	NA	False	NA	9	True	AATAAA	-16	NA	103024137	103030721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_103024654_103024674_103024968_103029012
Isoform_10587_13	chr11	+	3978	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-159	5	-159	1	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4889	False	NA	18	True	AATAAA	-11	NA	103061773	103089722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_10589_4	chr11	+	4108	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-289	5	-289	1	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4759	False	NA	18	True	AATAAA	-11	NA	103061643	103089722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_10591_4	chr11	+	3954	27	NIC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-138	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	8.099236577363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4910	False	NA	18	True	AATAAA	-11	NA	103061794	103089722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_10592_3	chr11	+	3836	26	FSM	ENSMUSG00000055805.16	ENSMUST00000042286.12	3806	26	-35	5	-35	1	multi-exon	FALSE	canonical	0	0	junction_6	9.20208671986958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	5013	False	NA	18	True	AATAAA	-11	NA	103061897	103089722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
Isoform_10593_42	chr11	+	2246	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	-6	2	-6	-2	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTCATGTTCTCCTG	NA	False	NA	29	True	AATAAA	-18	NA	103857558	103876161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
Isoform_10600_9	chr11	+	547	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3991	-2	-648	2	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCCCTCCGTTGATTTG	NA	False	NA	8	True	AATAAA	-22	NA	104475141	104478037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
Isoform_10601_8	chr11	+	1637	2	ISM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	66	12098	12	-7360	5prime_fragment	FALSE	canonical	3	278	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017316	105019122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_105017433_105017601
Isoform_10604_73	chr11	+	1802	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	66	-1	12	1	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	105017316	105031221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_10608_18	chr11	+	2569	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	48	-750	-6	750	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTTGGTGGTGTGGC	NA	False	NA	2	True	AATAAA	-12	NA	105017298	105031970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_10610_5	chr11	+	1468	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	17	382	17	-382	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCGTATTTTCTGGA	NA	False	NA	NA	False	AAAAAG	-23	NA	105017267	105030838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_10612_5	chr11	+	1983	8	NIC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_5	20.985903918233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	105017304	105031221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_10613_7	chr11	+	2543	8	FSM	ENSMUSG00000020691.14	ENSMUST00000136214.8	2556	8	9	4	9	-4	multi-exon	FALSE	canonical	2	5	junction_1	88.9260183225015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGACAAAAAAAGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105017313	105031216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105018268_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
Isoform_10615_10	chr11	+	3611	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	87	1	87	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072439	105173002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
Isoform_10617_39	chr11	+	5715	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	33	2	5	-2	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCTTGTGATGAATT	4778	False	NA	13	True	AATAAA	-22	NA	105927730	105950148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
Isoform_10619_40	chr11	+	1353	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	12	18	12	-18	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGTTGCTGGTATG	886	False	NA	8	True	NA	NA	NA	105956898	105964420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
Isoform_1062_6	chr10	-	1362	9	ISM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	19	9425	0	-5491	5prime_fragment	FALSE	canonical	3	31	junction_8	48.863169923778	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGAAAGAAAAAGAG	5345	False	NA	NA	False	AATAAA	-44	NA	68114551	67937774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
Isoform_10620_5	chr11	+	2571	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	5	-1193	5	1193	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATGAAA	879	False	NA	NA	False	NA	NA	NA	105956891	105965631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
Isoform_10624_16	chr11	+	4676	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-19	-1207	-19	1207	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTCCTGTGACCATGC	173	False	NA	17	True	AATAAA	-18	NA	105975419	106047479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
Isoform_10626_3	chr11	+	4713	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-59	-1204	-59	1204	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGGGTCCTGTGACCA	133	False	NA	14	True	AATAAA	-15	NA	105975379	106047476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
Isoform_10637_106	chr11	+	3990	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	22	-1	22	1	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107773	106139966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
Isoform_10644_1110	chr11	+	1314	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	0	2	0	-2	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	1110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTACAACTCCAGTTTG	4536	False	NA	13	True	AATAAA	-17	NA	106146979	106153944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
Isoform_10650_10	chr11	+	2916	8	NIC	ENSMUSG00000020712.12	novel	3059	8	NA	NA	-15	7	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.1189138534559	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCTTTTCCCGTTATC	7176	False	NA	NA	False	AATAAA	-18	NA	106167482	106178966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_106167620_106172728_106172805_106173612_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177643
Isoform_10651_10	chr11	+	2731	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-34	-1	-11	1	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTACTGCTTTTGAATT	5085	False	NA	11	True	AATAAA	-13	NA	106680066	106709680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
Isoform_10656_66	chr11	+	1861	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	25	18	-19	-18	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370334	107388981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
Isoform_10658_642	chr11	+	1505	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	26	373	-18	67	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTTTTTTCTTA	NA	False	NA	21	True	ATTAAA	-24	NA	107370335	107388626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
Isoform_10663_7	chr11	+	817	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	80	388431	-5	-609	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTATTAAACGTTTATT	NA	False	NA	NA	False	ATTAAA	-20	NA	108316097	108363010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
Isoform_10664_5	chr11	+	946	9	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	74	362285	0	25537	5prime_fragment	FALSE	canonical	3	17	junction_8	14.7457621030586	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGATGTGTCACATCTG	NA	False	NA	NA	False	NA	NA	NA	108316091	108389156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069
Isoform_10665_3	chr11	+	820	6	NNC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	1	-609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.0085696800139	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTATTAAACGTTTATT	NA	False	NA	NA	False	ATTAAA	-20	NA	108316092	108363010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361207_108362842
Isoform_10666_3	chr11	+	4281	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	-24	3	-24	-3	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108811150	108841606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_10667_8	chr11	+	4245	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	12	3	12	-3	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108811186	108841606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_10668_18	chr11	+	4405	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	33	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108811658	108841606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
Isoform_10672_13	chr11	+	945	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-31	0	-31	0	multi-exon	TRUE	canonical	3	100	junction_2	132.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	False	NA	9	True	AATAAA	-18	NA	109253625	109271301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109254083_109256361_109256589_109271040
Isoform_10674_11	chr11	+	1165	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-31	-220	-31	220	multi-exon	FALSE	canonical	3	100	junction_2	132.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGGTTTATTGCTTGTT	NA	False	NA	25	True	AATAAA	-40	NA	109253625	109271521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109254083_109256361_109256589_109271040
Isoform_10676_6	chr11	+	6182	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-27	5	-27	-5	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCTGGTAGCACGACG	NA	False	NA	7	True	AATAAA	-9	NA	109253629	109292190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
Isoform_10681_3	chr11	+	960	6	FSM	ENSMUSG00000020610.18	ENSMUST00000125108.2	1846	6	-4	890	2	-890	multi-exon	FALSE	canonical	3	91	junction_1	32.499846153482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGTGTTTTCTGTAGG	NA	False	NA	10	True	AATAAA	-28	NA	109316803	109320981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
Isoform_10682_26	chr11	+	1394	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	32	1390	2	-231	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316803	109327584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_10683_10	chr11	+	1619	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	32	1165	2	-6	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATTCTGTGTGGCCCT	NA	False	NA	13	True	AATAAA	-9	NA	109316803	109327809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_10684_4	chr11	+	1209	5	ISM	ENSMUSG00000020610.18	ENSMUST00000125108.2	1846	6	199	893	-39	-893	3prime_fragment	FALSE	canonical	3	149	junction_3	13.4257215820976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGCTGGTGTTTTCTGT	NA	False	NA	7	True	AATAAA	-25	NA	109317006	109320978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
Isoform_10685_15	chr11	+	1872	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-46	6	-40	-6	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATTCTGTGTGGCCCT	NA	False	NA	13	True	AATAAA	-9	NA	109317005	109327809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_10687_17	chr11	+	1660	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-59	231	-53	-231	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316992	109327584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
Isoform_10689_187	chr11	+	3331	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	29	-1	29	1	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAATCAGTTTTTCTTCC	NA	False	NA	21	True	AATAAA	-26	NA	109541775	109560483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
Isoform_10693_11	chr11	+	2121	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	-53	0	53	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTGCCTATCTCTT	NA	False	NA	67	True	AATGAA	-24	NA	110289947	110404520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_10694_83	chr11	+	2066	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	2	0	-2	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGGCATAGTATTAG	NA	False	NA	12	True	AGTAAA	-22	NA	110289947	110404465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_10695_5	chr11	+	4599	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	6	-2537	6	2537	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110289953	110407004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
Isoform_10697_29	chr11	+	2144	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	-12	11	-12	-11	multi-exon	FALSE	canonical	2	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	113510155	113516843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113510449_113514992
Isoform_107_134	ERCC-00116	+	1976	1	FSM	ERCC-00116A	DQ668367	1977	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00116_+_0_2000
Isoform_10700_498	chr11	+	3018	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	371	546	212	1	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113540365	113553227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
Isoform_10701_10	chr11	+	3362	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	366	207	207	-207	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTCTTCCGAGTGGA	NA	False	NA	NA	False	AATAAA	-28	NA	113540360	113553566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
Isoform_10708_11	chr11	+	2567	12	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	2929	546	-2589	1	3prime_fragment	FALSE	canonical	3	226	junction_3	31.6172878748634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113542923	113553227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
Isoform_10712_209	chr11	+	2061	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	1	0	1	0	multi-exon	FALSE	canonical	3	249	junction_1	30.335622624235	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575273	113585473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_10713_12	chr11	+	3060	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-1001	3	-966	-3	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113574271	113585470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_10717_14	chr11	+	1967	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575262	113585473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
Isoform_10718_54	chr11	+	2151	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	45	0	10	0	multi-exon	FALSE	canonical	3	41	junction_1	114.630929508575	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575282	113585473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_10719_61	chr11	+	2631	5	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	-2	0	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575263	113585473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
Isoform_10721_10	chr11	+	2526	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	28	junction_2	114.479498407163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575263	113585473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_113576098_113578599_113580048_113583220_113583329_113585337
Isoform_10722_835	chr11	+	315	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	56	0	-29	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559405	114563157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_10725_492	chr11	+	314	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	50	0	-11	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559423	114563157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_10726_201	chr11	+	328	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	17	0	17	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559468	114563157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
Isoform_10731_4	chr11	+	1760	3	FSM	ENSMUSG00000034714.10	ENSMUST00000141111.2	695	3	-23	-1042	-23	1042	multi-exon	FALSE	canonical	3	191	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114566318	114582471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114566499_114577219_114577393_114581064
Isoform_10732_168	chr11	+	3427	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	58	1	-27	-1	multi-exon	FALSE	canonical	3	173	junction_11	15.0937896237857	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCAGCTGAGTCACT	NA	False	NA	10	True	AATAAA	-13	NA	114566314	114611802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
Isoform_10733_32	chr11	+	3458	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	27	1	27	-1	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCAGCTGAGTCACT	NA	False	NA	10	True	AATAAA	-13	NA	114566283	114611802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
Isoform_10736_3	chr11	+	1883	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-62	3521	-62	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	866	False	NA	NA	False	AATAAA	-19	NA	114742605	114759922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
Isoform_10737_3	chr11	+	1827	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-9	3524	-9	-2	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTCTTGCTTTGGGCTT	919	False	NA	NA	False	AATAAA	-16	NA	114742658	114759919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
Isoform_10739_9	chr11	+	3675	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-13	5	-13	-5	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCCTGTGTGTTTCTA	915	False	NA	NA	False	ATTAAA	-33	NA	114742654	114763438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
Isoform_10741_11	chr11	+	1989	4	FSM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	211	0	181	0	multi-exon	FALSE	canonical	2	8	junction_1	13.5973853695808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	1147	False	NA	NA	False	AATAAA	-19	NA	114742886	114759922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321
Isoform_10742_409	chr11	+	1926	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	-1	0	1	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTGTCCTCCTTTG	NA	False	NA	11	True	NA	NA	NA	115054166	115072008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
Isoform_10744_5	chr11	+	1771	5	NIC	ENSMUSG00000020733.4	novel	1925	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	61.7130456224614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTGTCCTCCTTTG	NA	False	NA	11	True	NA	NA	NA	115054167	115072008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115054778_115067176_115067339_115069875_115069917_115070832_115070923_115071140
Isoform_10746_23	chr11	+	3279	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	25	1260	1	-1	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTCTCCCTCTTGCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	115078337	115136589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
Isoform_10747_6	chr11	+	4542	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	24	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTCCTCTGTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	115078336	115137851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
Isoform_10748_93	chr11	+	3727	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-23	-4	-23	4	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACCCTGGGTCTATCG	NA	False	NA	16	True	AATAAA	-26	NA	115272718	115286962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
Isoform_10749_118	chr11	+	3699	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	0	1	0	-1	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAAGTGACCCTGGGTC	NA	False	NA	11	True	AATAAA	-21	NA	115272741	115286957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
Isoform_10753_65	chr11	+	745	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	2	2	2	-2	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTTTCCAGTGAGAG	NA	False	NA	14	True	AATAAA	-14	NA	115294584	115301743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
Isoform_10754_7	chr11	+	706	5	NIC	ENSMUSG00000018858.16	novel	749	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	473.23428394401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294565	115301745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115294700_115297376_115297414_115300885_115300969_115301057_115301228_115301463
Isoform_10756_513	chr11	+	840	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	1	1755	1	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294578	115301745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
Isoform_10759_40	chr11	+	771	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	8	1743	-5	0	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294587	115301745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
Isoform_1076_522	chr10	-	1193	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	24	3158	-4	20	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCACTGTGGTGGCTGT	NA	False	NA	-8	True	AATATA	-17	NA	69188744	69174133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
Isoform_10762_4	chr11	+	2670	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	-23	2	-1	-2	multi-exon	FALSE	canonical	3	121	junction_1	5.97390157267426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCTGTGTCTCTCCTTC	3735	False	NA	26	True	NA	NA	NA	115310952	115322098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
Isoform_10763_5	chr11	+	1786	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3714	False	NA	28	True	NA	NA	NA	115310931	115322100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
Isoform_10764_3	chr11	+	2019	2	FSM	ENSMUSG00000045775.16	ENSMUST00000106532.4	2062	2	1	42	1	-42	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTTTTTGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	115353300	115365182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115353634_115363496
Isoform_10765_4	chr11	+	1437	3	FSM	ENSMUSG00000057219.12	ENSMUST00000136985.8	1009	3	-31	-397	0	397	multi-exon	FALSE	canonical	1	1	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGTTGTTTTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	115366492	115375000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115366854_115366947_115367092_115374068
Isoform_10766_48	chr11	+	2227	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	34	-1	3	1	multi-exon	FALSE	canonical	3	16	junction_2	2.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGCTAGTCTCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	115366526	115381294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115366854_115366947_115367092_115379538
Isoform_10769_1362	chr11	+	2095	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	49	86	-42	-7	multi-exon	FALSE	canonical	3	862	junction_16	81.0315439264927	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455308	115474725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_10771_88	chr11	+	2072	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-43	-7	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455307	115474725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
Isoform_10772_48	chr11	+	2763	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-7	intron_retention	FALSE	canonical	3	862	junction_15	82.7709559076643	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455309	115474725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_10774_20	chr11	+	2017	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	-7	combination_of_known_junctions	TRUE	canonical	3	10	junction_11	247.898824098904	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGACCAATTGTTAA	NA	False	NA	5	True	AATAAA	-11	NA	115455302	115474725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
Isoform_10783_78	chr11	+	1552	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	410	0	-410	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTTGGGGTTGGTGA	NA	False	NA	27	True	AATAAA	-41	NA	115494750	115498452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
Isoform_10785_268	chr11	+	1294	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	668	0	367	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCATTCTGTGAGTCT	NA	False	NA	12	True	NA	NA	NA	115494750	115498194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
Isoform_1079_3	chr10	-	1857	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	-22	1042	-22	153	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTATTTGTACGT	NA	False	NA	NA	False	AATAAA	-10	NA	70435143	70394553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
Isoform_10792_18	chr11	+	4961	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	28	340	7	-7	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCCTGTGGTGGAT	NA	False	NA	8	True	ATTAAA	-16	NA	115656286	115689852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_10794_10	chr11	+	4904	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	20.1870029585754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCCTGTGGTGGAT	NA	False	NA	8	True	ATTAAA	-16	NA	115656277	115689852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_10796_4	chr11	+	4857	31	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-1	-10	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	25.7846853771769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAACATCCTGTGGTG	NA	False	NA	5	True	ATTAAA	-13	NA	115656257	115689849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115656380_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
Isoform_10799_10	chr11	+	2429	10	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	10	7	10	-2	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGGTTCAATACTT	5942	False	NA	NA	False	ATTAAA	-14	NA	115705559	115713913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824
Isoform_10801_7	chr11	+	1923	11	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	65.491678860753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5963	False	NA	NA	False	ATTAAA	-16	NA	115705580	115713915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712922_115713408
Isoform_10802_393	chr11	+	1947	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	27	5	5	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5959	False	NA	NA	False	ATTAAA	-16	NA	115705576	115713915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_10805_20	chr11	+	2066	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5935	False	NA	NA	False	ATTAAA	-16	NA	115705552	115713915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115705646_115705740_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_10808_36	chr11	+	2066	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	180	junction_1	22.7063922038174	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5935	False	NA	NA	False	ATTAAA	-16	NA	115705552	115713915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_1081_18	chr10	-	3009	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	215	943	215	-943	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATCTGCTTTCCATGT	NA	False	NA	NA	False	AAAACA	-16	NA	71073895	71062236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_10810_6	chr11	+	2122	10	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	8	-2	intron_retention	FALSE	canonical	3	9	junction_7	65.8432481985308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGGTTCAATACTT	5962	False	NA	NA	False	ATTAAA	-14	NA	115705579	115713913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712396_115712543_115712824_115712942_115713408
Isoform_10811_8	chr11	+	2149	9	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	180	junction_8	21.3819433167334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5947	False	NA	NA	False	ATTAAA	-16	NA	115705564	115713915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
Isoform_10812_17	chr11	+	3794	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-12	-24	combination_of_known_junctions	TRUE	canonical	3	59	junction_1	202.96016457021	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6788	False	NA	14	True	AGTAAA	-16	NA	115714862	115746580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_10813_7	chr11	+	3760	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	14	-26	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	236.696182563717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACCTTGTTTCGTCTT	6823	False	NA	12	True	AGTAAA	-14	NA	115714897	115746578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
Isoform_10815_16	chr11	+	2544	16	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-5	4268	-5	-2808	5prime_fragment	FALSE	canonical	3	630	junction_7	74.0742570368111	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTCCAGAAAGTCTGG	6795	False	NA	NA	False	NA	NA	NA	115714869	115742338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833
Isoform_10817_362	chr11	+	3531	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-6	26	-6	-24	multi-exon	FALSE	canonical	3	630	junction_7	88.2626444199357	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6794	False	NA	14	True	AGTAAA	-16	NA	115714868	115746580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
Isoform_10818_39	chr11	+	3532	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-26	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_23	160.438568929045	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACCTTGTTTCGTCTT	6794	False	NA	12	True	AGTAAA	-14	NA	115714868	115746578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
Isoform_1082_16	chr10	-	3947	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	208	12	208	-12	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAATTTGAAACCTGT	NA	False	NA	NA	False	ATTAAA	-6	NA	71073902	71061305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_10820_20	chr11	+	3483	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-24	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	172.677761668954	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6794	False	NA	14	True	AGTAAA	-16	NA	115714868	115746580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
Isoform_10821_18	chr11	+	3468	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_22	177.134713134445	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACCTTGTTTCGTCTT	6810	False	NA	12	True	AGTAAA	-14	NA	115714884	115746578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
Isoform_10828_107	chr11	+	3280	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	370	4	15	-4	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	414	False	NA	3	True	NA	NA	NA	115824477	115857547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_1083_121	chr10	-	1485	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	208	2474	208	508	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTTCTGAAATTATG	NA	False	NA	-12	True	AATAAA	-16	NA	71073902	71063767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
Isoform_10830_5	chr11	+	3348	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	301	5	10	-5	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTTTGGTTTTGT	345	False	NA	2	True	NA	NA	NA	115824408	115857546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_10831_192	chr11	+	1205	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	373	2076	18	-886	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	417	False	NA	16	True	ATTAAA	-17	NA	115824480	115855475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_10833_12	chr11	+	1241	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	337	2076	-18	-886	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	381	False	NA	16	True	ATTAAA	-17	NA	115824444	115855475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_10836_4	chr11	+	3169	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTTGGTTTTGTGGA	417	False	NA	5	True	NA	NA	NA	115824480	115857549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
Isoform_10838_11	chr11	+	3704	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	31	0	30	0	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8853	False	NA	19	True	AATAAA	-13	NA	115921178	115952040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
Isoform_10839_82	chr11	+	887	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	15	0	15	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9082	False	NA	7	True	AATAAA	-14	NA	116089695	116106144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
Isoform_10842_627	chr11	+	1472	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	6	4	6	-4	multi-exon	FALSE	canonical	3	1535	junction_2	51	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116324925	116329899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116325255_116325384_116325448_116328819
Isoform_10843_837	chr11	+	1357	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	123	2	123	-2	multi-exon	FALSE	canonical	3	1535	junction_2	51	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGTTTTTGTTTTT	NA	False	NA	34	True	TTTAAA	-27	NA	116325042	116329901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116325255_116325384_116325448_116328819
Isoform_10849_39	chr11	+	1569	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	-91	4	-91	-4	multi-exon	TRUE	canonical	3	1535	junction_2	51	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116324828	116329899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116325255_116325384_116325448_116328819
Isoform_10854_15	chr11	+	1988	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	-1	1	-1	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562493	116566623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
Isoform_10855_13	chr11	+	871	6	FSM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	-19	5	0	1	multi-exon	FALSE	canonical	3	20	junction_5	61.1901952930369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGGTAGCATTGTGG	NA	False	NA	-1	True	AATAAA	-12	NA	116562494	116566620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566314
Isoform_10856_52	chr11	+	853	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	9	3	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTAGCATTGTGGG	NA	False	NA	0	True	AATAAA	-13	NA	116562494	116566621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
Isoform_10857_3	chr11	+	2385	4	ISM	ENSMUSG00000020812.19	ENSMUST00000239226.2	1257	5	1	3	1	0	intron_retention	FALSE	canonical	3	171	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTAGCATTGTGGG	NA	False	NA	0	True	AATAAA	-13	NA	116562501	116566621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_116563182_116563489_116563565_116564763_116564898_116565125
Isoform_10858_6	chr11	+	586	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	1	-2	1	2	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTCTATGCAATCC	8952	False	NA	26	True	AATAAA	-31	NA	116734387	116736961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116734601_116736588
Isoform_10859_3	chr11	+	1171	6	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	44.7812460746684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTACTCCCAATCATT	8953	False	NA	12	True	ATTAAA	-14	NA	116734388	116740563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_10860_7	chr11	+	966	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	300	10	-7	-10	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTTAGACTACTCCC	8968	False	NA	5	True	ATTAAA	-7	NA	116734403	116740556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_10861_24	chr11	+	871	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	300	105	-7	6	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGTATGAAGATGATCA	8968	False	NA	23	True	CATAAA	-23	NA	116734403	116740461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_10863_6	chr11	+	1025	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	241	10	-36	-10	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTTAGACTACTCCC	8909	False	NA	5	True	ATTAAA	-7	NA	116734344	116740556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
Isoform_10864_3	chr11	+	958	4	FSM	ENSMUSG00000090266.11	ENSMUST00000176799.8	847	4	-110	-1	2	1	multi-exon	FALSE	canonical	3	104	junction_1	14.8996644257513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAATGGGTATGAAGAT	8953	False	NA	18	True	CATAAA	-18	NA	116734388	116740456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116734601_116739079_116739185_116739726_116740127_116740215
Isoform_10865_3	chr11	+	2474	14	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.8406941640727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744302	116765536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_116744584_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_10866_70	chr11	+	2338	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744585	116765537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_10867_3	chr11	+	1273	2	FSM	ENSMUSG00000020818.17	ENSMUST00000151944.3	419	2	-65	-789	2	789	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAACAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116744589	116746331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116745000_116745468
Isoform_10868_44	chr11	+	2429	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-55	924	3	-1	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744590	116765537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_10869_3	chr11	+	2960	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-586	924	-61	-1	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744059	116765537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_10870_6	chr11	+	4257	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	6.60462669270565	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAATTGGTGGGATTTT	1796	False	NA	NA	False	AATAAA	-25	NA	116809676	116877767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
Isoform_10871_210	chr11	+	592	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	5	3	0	-1	multi-exon	FALSE	canonical	3	615	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTTTCCATTGTTC	880	False	NA	17	True	AATAAA	-13	NA	116967613	116969778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116968029_116969601
Isoform_10873_44	chr11	+	4738	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-88	4	-18	-1	multi-exon	TRUE	canonical	3	319	junction_5	24.9420662068455	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117005975	117050090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
Isoform_10874_169	chr11	+	4668	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-18	4	-18	-1	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117006045	117050090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
Isoform_10875_156	chr11	+	3012	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-57	1699	9	10	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTGATATTTTTCAG	NA	False	NA	13	True	ATTAAA	-27	NA	117006006	117048395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
Isoform_1088_29	chr10	-	1427	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	3	1	3	-1	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCTTGACTACTTAATGC	NA	False	NA	-1	True	AATAAA	-17	NA	71121089	71090810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
Isoform_10880_14	chr11	+	2817	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	48	1	-18	-1	multi-exon	FALSE	canonical	3	28	junction_16	82.8488599423673	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117006045	117050090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
Isoform_10881_11	chr11	+	2887	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	-22	1	-18	-1	multi-exon	FALSE	canonical	3	28	junction_16	82.8488599423673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGTGTCCTTTTCTTC	NA	False	NA	4	True	AATAAA	-14	NA	117005975	117050090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
Isoform_10887_79	chr11	+	3583	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	13	20	13	-3	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	3711	False	NA	83	True	AATAAA	-8	NA	117090499	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_1089_47	chr10	-	1384	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	46	1	2	-1	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCTTGACTACTTAATGC	NA	False	NA	-1	True	AATAAA	-17	NA	71121046	71090810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
Isoform_10890_101	chr11	+	3590	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	186	8	186	-3	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	882	False	NA	83	True	AATAAA	-8	NA	117157257	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10891_29	chr11	+	3881	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	-105	8	-105	-3	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	591	False	NA	83	True	AATAAA	-8	NA	117156966	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10897_90	chr11	+	2910	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117198974	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10899_19	chr11	+	2886	10	NIC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	199.641345083293	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117217236	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_117217336_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10900_105	chr11	+	2937	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	-16	3	-16	-3	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117222529	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10902_997	chr11	+	2837	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	76	19	-7	-3	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117223246	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_10903_43	chr11	+	2920	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	-2	14	-2	2	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117223168	117253136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_1091_491	chr10	-	739	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	97	248	97	-248	multi-exon	FALSE	canonical	3	1606	junction_1	82	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGTACATGTACATT	1350	False	NA	-34	True	ATTAAA	-9	NA	71180687	71166557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_10914_12	chr11	+	616	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	98	1070	98	-1070	multi-exon	FALSE	canonical	3	27	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTACATCGGTCT	NA	False	NA	NA	False	AATGAA	-37	NA	117502170	117503613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117502261_117503087
Isoform_10915_4	chr11	+	560	2	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	4	62670	4	-48532	5prime_fragment	FALSE	canonical	3	108	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGAAAAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	117545642	117591595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_117546158_117591550
Isoform_10916_5	chr11	+	3312	15	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	3	15	intron_retention	FALSE	canonical	2	3	junction_3	5.31507290636732	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTCTTGGACAAGAGT	7617	False	NA	NA	False	NA	NA	NA	117673125	117683951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
Isoform_10918_69	chr11	+	1510	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	11	-1	-4	1	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGCTGGGTGGCGCC	NA	False	NA	15	True	AATAAA	-15	NA	117700504	117705110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
Isoform_10919_9	chr11	+	1426	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	-28	4	0	-4	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTTGTGCTGGGTG	NA	False	NA	10	True	AATAAA	-10	NA	117700493	117705105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
Isoform_1092_51	chr10	-	975	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	97	12	97	-12	multi-exon	FALSE	canonical	3	1606	junction_1	82	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTCATCTCTGTG	1350	False	NA	-5	True	AATAAA	-15	NA	71180687	71166321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_10920_13	chr11	+	2309	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	17	1	17	-1	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGGTTTTCTGTTTGTT	NA	False	NA	14	True	NA	NA	NA	117716766	117730733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
Isoform_10926_8	chr11	+	3332	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	-1	3	-1	-3	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTGTCTTGGAGAAA	NA	False	NA	37	True	AATAAA	-26	NA	117740143	117746566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117740288_117740579_117740690_117743488
Isoform_10929_465	chr11	+	891	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	66	-10	-2	-1	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTTGGAGAAATG	NA	False	NA	39	True	AATAAA	-28	NA	117740142	117746568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
Isoform_1093_20	chr10	-	770	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	66	248	66	-248	multi-exon	FALSE	canonical	3	1606	junction_1	82	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGTACATGTACATT	1319	False	NA	-34	True	ATTAAA	-9	NA	71180718	71166557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_71166957_71172043_71172250_71180553
Isoform_10930_156	chr11	+	931	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	17	-1	17	1	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAAGCTCTGTCTGTCTT	NA	False	NA	30	True	AATAAA	-19	NA	117740093	117746559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
Isoform_10933_8	chr11	+	770	3	NIC	ENSMUSG00000017716.16	novel	947	4	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	950.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAAGCTCTGTCTGTC	NA	False	NA	28	True	AATAAA	-17	NA	117740142	117746557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_117740288_117743488_117743607_117746050
Isoform_10935_491	chr11	+	2288	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	575	0	-18	0	multi-exon	FALSE	canonical	1	116	junction_9	67.5268579397108	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877692	117914837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
Isoform_10938_16	chr11	+	2218	10	FSM	ENSMUSG00000017715.12	ENSMUST00000017859.10	2197	10	-21	0	-21	0	multi-exon	TRUE	canonical	1	46	junction_7	99.2782596518803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877689	117914837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
Isoform_10940_99	chr11	+	2492	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	4	8	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGCTTCTTTTGAGAA	NA	False	NA	14	True	CATAAA	-21	NA	118367801	118378607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
Isoform_10941_11	chr11	+	3935	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGATGTTGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	118367782	118380031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
Isoform_10944_184	chr11	+	2493	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	143	1428	0	8	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGCTTCTTTTGAGAA	NA	False	NA	14	True	CATAAA	-21	NA	118367797	118378607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_10945_18	chr11	+	2630	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	-2	1436	-2	0	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAAAAGGTGCTTCT	NA	False	NA	6	True	CATAAA	-13	NA	118367652	118378599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_10946_5	chr11	+	3945	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	112	7	0	-7	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAATGAGATGTTGAGT	NA	False	NA	NA	False	AATAAA	-11	NA	118367766	118380028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_10947_4	chr11	+	2518	14	FSM	ENSMUSG00000033857.13	ENSMUST00000171769.8	3807	14	-19	1308	0	6	multi-exon	FALSE	canonical	2	6	junction_2	29.6532225814911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGTGCTTCTTTTGAG	NA	False	NA	12	True	CATAAA	-19	NA	118367766	118378605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_118367931_118369708_118369780_118369915_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
Isoform_10948_182	chr11	+	3732	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	75	0	75	0	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913862	118922096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
Isoform_10949_4	chr11	+	3768	4	NIC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	116	0	intron_retention	FALSE	canonical	3	213	junction_1	8.73053390247253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913903	118922096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_118914128_118915000_118915067_118917275_118917382_118918724
Isoform_1095_4	chr10	-	2106	5	Fusion	ENSMUSG00000111994.2_ENSMUSG00000112168.2	novel	1140	3	NA	NA	-25028	301	multi-exon	FALSE	canonical	0	0	junction_3	4.63680924774785	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGGTTCTGAAAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	72810652	72775768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr10_-_72776843_72780098_72780242_72785400_72785926_72806094_72806255_72810448
Isoform_10950_3	chr11	+	3048	14	ISM	ENSMUSG00000039963.21	ENSMUST00000236813.2	4769	21	9604	-7	-516	7	3prime_fragment	FALSE	canonical	0	0	junction_2	4.428257835269	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAGAGTTAAGACACAT	2286	False	NA	NA	False	AATAAA	-22	NA	119129027	119156071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119129075_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
Isoform_10951_3	chr11	+	3177	14	NIC	ENSMUSG00000039963.21	novel	799	5	NA	NA	-126	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.428257835269	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTCAGAAGAGTTAAGA	2676	False	NA	NA	False	AATAAA	-17	NA	119129417	119156066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_119129599_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
Isoform_10952_16	chr11	+	3424	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	-61	0	-61	0	multi-exon	TRUE	canonical	3	38	junction_1	100.783495768854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158790	119176280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_10953_42	chr11	+	3364	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	0	-1	0	1	multi-exon	FALSE	canonical	3	38	junction_1	100.783495768854	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158851	119176281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_10955_530	chr11	+	3457	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	177	-1	36	1	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158889	119176281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
Isoform_1096_65	chr10	-	2917	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	52	531	-31	11	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTTTGTCTTGTCGTC	NA	False	NA	-2	True	AATAAA	-22	NA	75353163	75342647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
Isoform_10966_41	chr11	+	2637	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	28	30	-3	0	multi-exon	FALSE	canonical	3	19	junction_1	16.3122605346408	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATACAATATTCTG	NA	False	NA	NA	False	ATTAAA	-45	NA	119246410	119271875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
Isoform_10968_4	chr11	+	2956	12	ISM	ENSMUSG00000070327.15	ENSMUST00000131035.10	16716	67	81181	-2	-3776	2	3prime_fragment	FALSE	canonical	3	107	junction_2	13.3218269910762	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	9525	False	NA	16	True	AATAAA	-16	NA	119365106	119378246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_10970_4	chr11	+	2297	7	ISM	ENSMUSG00000070327.15	ENSMUST00000172235.2	2422	9	2735	0	2735	0	3prime_fragment	FALSE	canonical	3	132	junction_4	8.27982823224948	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119371617	119378243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
Isoform_10971_21	chr11	+	3101	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	37	1932	-5	-88	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGTGTCTGGGGAGC	6291	False	NA	7	True	ATTAAA	-18	NA	119382209	119400317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_10972_42	chr11	+	1385	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	28	3657	0	15	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6282	False	NA	NA	False	AATACA	-23	NA	119382200	119398592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_10973_23	chr11	+	3180	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	2	1944	2	-86	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTGTCTGGGGAGCCT	6539	False	NA	9	True	ATTAAA	-20	NA	119382457	119400319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
Isoform_10975_6	chr11	+	2515	3	ISM	ENSMUSG00000025583.16	ENSMUST00000130049.8	3384	7	64	109505	44	-109505	5prime_fragment	FALSE	canonical	3	106	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAAAAAGGAAAG	2214	False	NA	NA	False	NA	NA	NA	119493884	119563602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119494798_119548489_119548593_119562103
Isoform_10976_4	chr11	+	3683	14	FSM	ENSMUSG00000025583.16	ENSMUST00000147772.8	3662	14	-20	-1	0	1	multi-exon	FALSE	canonical	3	94	junction_8	9.2863710022017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2150	False	NA	NA	False	ACTAAA	-26	NA	119493820	119735866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507
Isoform_10977_3	chr11	+	3570	22	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	24.7230464333041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTGCACATTATG	2150	False	NA	NA	False	ATTAAA	-24	NA	119493820	119758214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119757979
Isoform_10978_6	chr11	+	6730	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-136	0	-2	0	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	2168	False	NA	8	True	AATAAA	-15	NA	119493838	119790233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
Isoform_10979_8	chr11	+	3177	12	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	268654	165	14908	4	3prime_fragment	FALSE	canonical	3	94	junction_2	17.6812923502088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGCCCTTGCCAGATGA	NA	False	NA	12	True	AATAAA	-19	NA	119763177	119790237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
Isoform_1098_3	chr10	-	3013	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	-52	539	-52	3	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTAGCACCCTTTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	75353267	75342655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
Isoform_10980_6	chr11	+	3308	12	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	268519	169	14773	0	3prime_fragment	FALSE	canonical	3	94	junction_2	17.6812923502088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	NA	False	NA	8	True	AATAAA	-15	NA	119763042	119790233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
Isoform_10981_13	chr11	+	2118	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	5	2	5	-2	intron_retention	FALSE	canonical	3	311	junction_5	12.2667119564381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	16	True	ATTAAA	-31	NA	119804640	119810372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809
Isoform_10982_396	chr11	+	1537	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	20	0	0	0	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTAGTGTCTTGGT	NA	False	NA	18	True	ATTAAA	-33	NA	119804655	119810374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
Isoform_10985_9	chr11	+	2521	13	FSM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	330	1154	-23	-732	multi-exon	FALSE	canonical	3	21	junction_12	7.16278964898143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119833918	119892293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
Isoform_10986_18	chr11	+	2037	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	329	1152	-24	-730	multi-exon	TRUE	canonical	2	3	junction_13	10.9230769230769	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119833917	119892295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
Isoform_10987_10	chr11	+	2113	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	329	0	-24	0	multi-exon	FALSE	canonical	2	2	junction_13	13.1158495799579	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833917	119897608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
Isoform_10988_45	chr11	+	2065	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	329	0	-24	0	multi-exon	FALSE	canonical	3	19	junction_13	8.07215976759687	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833917	119897608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
Isoform_10989_105	chr11	+	490	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	9	282	-7	9	multi-exon	FALSE	canonical	3	883	junction_2	30.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCTCTCCCAAGGACA	NA	False	NA	15	True	TATAAA	-15	NA	119989762	119991249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119989892_119989973_119990085_119990999
Isoform_1099_4	chr10	-	2874	6	NIC	ENSMUSG00000033416.16	novel	2843	6	NA	NA	7	5	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	28.7026131214564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTAGCACCCTTTGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	75353713	75342653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353574
Isoform_10990_8	chr11	+	780	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	1	0	1	0	multi-exon	FALSE	canonical	3	883	junction_2	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCTGGAGAGATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	119989754	119991531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119989892_119989973_119990085_119990999
Isoform_10991_3	chr11	+	531	2	FSM	ENSMUSG00000078572.4	ENSMUST00000186913.2	401	2	-159	29	-4	22	multi-exon	FALSE	canonical	3	883	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTCAGACTTTTATATA	NA	False	NA	-23	True	NA	NA	NA	119989765	119991211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_119990085_119990999
Isoform_10993_4	chr11	+	2951	5	ISM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	6	0	-5	0	intron_retention	FALSE	canonical	3	99	junction_3	18.3439363278441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	214	False	NA	NA	False	AATAAA	-20	NA	120348946	120355184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831
Isoform_10994_146	chr11	+	2754	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	24	0	1	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	232	False	NA	NA	False	AATAAA	-20	NA	120348964	120355184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
Isoform_10997_21	chr11	+	2794	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	192	False	NA	NA	False	AATAAA	-20	NA	120348924	120355184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
Isoform_11_324	ERCC-00003	+	1005	1	FSM	ERCC-00003A	DQ516784	1007	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	2	1007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00003_+_0_1000
Isoform_1100_33	chr10	-	3186	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-35	0	-18	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTCCCGTCTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	75479860	75472539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_11001_5	chr11	+	2541	5	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-2	7	intron_retention	FALSE	canonical	3	4	junction_2	56.7978872846517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTCTTGTTTCTGGTG	229	False	NA	NA	False	AATAAA	-27	NA	120348961	120355191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120349105_120349437_120349572_120352541_120352625_120352831_120352912_120353090
Isoform_11003_145	chr11	+	2862	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	38	3	38	-3	multi-exon	FALSE	canonical	3	105	junction_14	76.3896503775692	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8220	False	NA	10	True	AATAAA	-11	NA	120358498	120374802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
Isoform_11004_26	chr11	+	3146	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	38	3	38	-3	intron_retention	FALSE	canonical	3	286	junction_14	46.7074940453885	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8220	False	NA	10	True	AATAAA	-11	NA	120358498	120374802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
Isoform_11005_327	chr11	+	2859	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	38	3	38	-3	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8220	False	NA	10	True	AATAAA	-11	NA	120358498	120374802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
Isoform_11006_238	chr11	+	959	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	311	46	297	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCCTGAACCTTG	9001	False	NA	25	True	TATAAA	-17	NA	120375484	120379580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_11007_549	chr11	+	907	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	46	363	46	245	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTGTGTGTGCCCA	9001	False	NA	-27	True	AATATA	-22	NA	120375484	120379528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_11008_23	chr11	+	983	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	-30	363	-30	245	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTGTGTGTGCCCA	8925	False	NA	-27	True	AATATA	-22	NA	120375408	120379528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_11009_9	chr11	+	1013	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	-9	312	-9	296	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTCCTGAACCTT	8946	False	NA	24	True	TATAAA	-16	NA	120375429	120379579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
Isoform_1101_96	chr10	-	3139	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	11	1	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTCCCGTCTGTTTG	NA	False	NA	-2	True	NA	NA	NA	75479814	75472540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_11011_123	chr11	+	1987	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	0	-12	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382701	120390013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
Isoform_11014_5	chr11	+	2459	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	36	-472	-12	472	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTGCCAAAACTAGAG	NA	False	NA	NA	False	TATAAA	-28	NA	120382701	120390485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
Isoform_11016_185	chr11	+	711	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	91	2427	-20	-5	multi-exon	FALSE	canonical	3	903	junction_1	470.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGGCCAAAACCTTCA	3991	False	NA	124	True	AATAAA	-12	NA	120489337	120496597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_11018_429	chr11	+	651	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	53	2525	34	-103	multi-exon	FALSE	canonical	3	903	junction_1	470.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCCGTGCTGGAGGCCTC	3953	False	NA	26	True	AGTAAA	-15	NA	120489299	120496499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_11019_16	chr11	+	806	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	-7	2430	-7	-8	multi-exon	FALSE	canonical	3	903	junction_1	470.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAATGGCCAAAACCT	3893	False	NA	121	True	AATAAA	-9	NA	120489239	120496594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_1102_10	chr10	-	3226	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	11	-86	0	86	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCCTCTGCTCCTGCT	NA	False	NA	1	True	NA	NA	NA	75479814	75472453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_11020_36	chr11	+	710	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	3	2516	3	-94	multi-exon	FALSE	canonical	3	903	junction_1	470.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGCTTGCCT	3903	False	NA	35	True	AGTAAA	-24	NA	120489249	120496508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489431_120490067_120490195_120496106
Isoform_11022_420	chr11	+	703	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	154	105	154	-105	multi-exon	FALSE	canonical	3	1006	junction_1	419	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGCCGTGCTGGAGGCC	4165	False	NA	24	True	AGTAAA	-13	NA	120489511	120496497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_11023_221	chr11	+	819	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	138	5	138	-5	multi-exon	FALSE	canonical	3	1006	junction_1	419	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGGCCAAAACCTTCA	4149	False	NA	124	True	AATAAA	-12	NA	120489495	120496597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_11024_31	chr11	+	770	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	97	95	97	-95	multi-exon	FALSE	canonical	3	1006	junction_1	419	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGCTTGCC	4108	False	NA	34	True	AGTAAA	-23	NA	120489454	120496507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_11025_16	chr11	+	901	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	67	-6	67	6	multi-exon	FALSE	canonical	3	1006	junction_1	419	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTCATCGTAATCTGA	4078	False	NA	135	True	AATAAA	-23	NA	120489424	120496608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120489697_120490067_120490195_120496106
Isoform_11027_3	chr11	+	580	2	FSM	ENSMUSG00000044034.12	ENSMUST00000106195.3	542	2	-39	1	-39	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTAAGGGTTGCTGG	1169	False	NA	NA	False	AATAAA	-13	NA	120499263	120499918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120499566_120499640
Isoform_11028_12	chr11	+	2076	2	FSM	ENSMUSG00000025142.19	ENSMUST00000169964.2	505	2	59	-1630	6	-6	multi-exon	FALSE	canonical	3	898	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120563857	120566802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120563997_120564865
Isoform_11029_324	chr11	+	1758	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	60	2	-4	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563877	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11030_66	chr11	+	1837	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	-19	2	0	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563798	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11031_6	chr11	+	1995	15	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	887	junction_3	64.9601526212141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563857	120600268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599826_120599896_120600073_120600169
Isoform_11033_11	chr11	+	2106	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563817	120600268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
Isoform_11034_11	chr11	+	1691	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106158.9	1690	15	0	-1	0	0	multi-exon	FALSE	canonical	3	22	junction_10	252.602010107212	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563881	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11035_17	chr11	+	1865	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564214	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11036_23	chr11	+	2072	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564194	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11038_10	chr11	+	2300	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	387	2	5	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564204	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_1104_3	chr10	-	3264	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-30	-83	-13	83	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTTCCTCTGCTCCT	NA	False	NA	-2	True	NA	NA	NA	75479855	75472456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_11040_4	chr11	+	2562	18	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	12.9044934637937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTCGTCCAGTTCCT	6095	False	NA	NA	False	AATACA	-20	NA	120604781	120611950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120604880_120604993_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_11041_66	chr11	+	2464	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	26	2	0	-2	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTCCAGTTCCTTT	6090	False	NA	NA	False	AATACA	-22	NA	120604776	120611952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_11043_3	chr11	+	2779	17	NNC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_15	14.2587692315992	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTCTCGTCCAGTTCC	6090	False	NA	NA	False	AATACA	-19	NA	120604776	120611949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610933_120611011_120611160_120611443
Isoform_11044_4	chr11	+	2395	17	FSM	ENSMUSG00000025145.14	ENSMUST00000145781.8	2390	17	-8	3	-8	-3	multi-exon	FALSE	canonical	1	1	junction_12	14.0844273490263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAAATTCTCGTCCAGT	6082	False	NA	NA	False	AATACA	-16	NA	120604768	120611946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
Isoform_11045_5	chr11	+	1067	6	FSM	ENSMUSG00000018012.12	ENSMUST00000142229.2	589	6	-115	-363	-12	0	multi-exon	FALSE	canonical	1	1	junction_1	23.4486673395313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3786	False	NA	14	True	AATAAA	-14	NA	120612283	120614795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120612447_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_11046_55	chr11	+	1082	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	29	junction_1	12.4739729036101	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3792	False	NA	14	True	AATAAA	-14	NA	120612289	120614795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_11049_3	chr11	+	1117	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	5	-405	5	1	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCGCTGTCTGCCCT	4347	False	NA	15	True	AATAAA	-15	NA	120612844	120614796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_11050_3	chr11	+	1369	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	-247	-405	194	1	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCGCTGTCTGCCCT	4095	False	NA	15	True	AATAAA	-15	NA	120612592	120614796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
Isoform_11051_26	chr11	+	1923	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	6	-4	-4	0	multi-exon	TRUE	canonical	3	682	junction_1	150.079122650539	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1400	False	NA	1	True	ATTAAA	-18	NA	120675106	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
Isoform_11052_243	chr11	+	1850	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	-24	1	-4	0	multi-exon	FALSE	canonical	3	682	junction_1	155.049677093711	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1400	False	NA	1	True	ATTAAA	-18	NA	120675106	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_11054_23	chr11	+	1846	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	-3	0	-3	0	multi-exon	FALSE	canonical	3	121	junction_6	299.627579489159	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1401	False	NA	1	True	ATTAAA	-18	NA	120675107	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_11055_19	chr11	+	2057	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	15	1	15	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1649	False	NA	1	True	ATTAAA	-18	NA	120675355	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
Isoform_11056_13	chr11	+	2129	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-57	1	-57	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1577	False	NA	1	True	ATTAAA	-18	NA	120675283	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
Isoform_11057_288	chr11	+	1985	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	15	0	15	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1649	False	NA	2	True	ATTAAA	-19	NA	120675355	120679928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_11058_12	chr11	+	1974	14	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_6	355.513163564242	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1656	False	NA	1	True	ATTAAA	-18	NA	120675362	120679927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
Isoform_11061_345	chr11	+	2211	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	27	2097	27	-4	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGTTCTGGCCCTCA	NA	False	NA	18	True	NA	NA	NA	120839933	120849597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_11062_114	chr11	+	2275	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	-37	2097	-9	-4	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGTTCTGGCCCTCA	NA	False	NA	18	True	NA	NA	NA	120839869	120849597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_11064_17	chr11	+	2125	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	30	231	16	-6	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGTGGTTCTGGCCCT	NA	False	NA	16	True	NA	NA	NA	120839922	120849595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
Isoform_11066_16	chr11	+	1856	2	FSM	ENSMUSG00000039329.9	ENSMUST00000155694.2	406	2	0	-1450	0	-2	multi-exon	FALSE	canonical	3	732	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTATGTGTATGGT	NA	False	NA	24	True	AATAAA	-18	NA	121036982	121039143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121037049_121037353
Isoform_11067_465	chr11	+	1731	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	14	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	1	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036982	121039145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121037049_121037353_121037428_121037554
Isoform_1107_10	chr10	-	2777	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	0	-502	0	-1	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTTCCCGTCTGTT	NA	False	NA	-4	True	NA	NA	NA	75479814	75472542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
Isoform_11070_25	chr11	+	2349	13	FSM	ENSMUSG00000039307.17	ENSMUST00000038831.15	2378	13	18	11	16	-3	multi-exon	FALSE	canonical	3	4	junction_9	6.31576510716547	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCCCACCAGCAGAAAC	NA	False	NA	1	True	AATAAA	-17	NA	121095276	121113470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112061_121112164_121112326_121112417_121113038
Isoform_11071_64	chr11	+	2120	13	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	4.60675832036175	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCCACCAGCAGAAACTC	NA	False	NA	3	True	AATAAA	-19	NA	121095288	121113472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
Isoform_11072_3	chr11	+	2066	12	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	6.09023062707063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGCAGAAACTCTAATCA	NA	False	NA	9	True	AATAAA	-25	NA	121095258	121113478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121113038
Isoform_11073_3	chr11	+	2032	12	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	26	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.29994905450354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCTAATCAGCTTTT	NA	False	NA	15	True	AATAAA	-31	NA	121095286	121113484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112326_121112417_121113038
Isoform_11074_39	chr11	+	3103	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	0	1292	0	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128078	121145390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
Isoform_11076_22	chr11	+	3137	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-34	1292	-34	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128044	121145390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
Isoform_11077_14	chr11	+	2501	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	13	6	13	-6	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGATGCCTAAGACTGGT	3870	False	NA	NA	False	AATAAA	-14	NA	121312239	121322108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
Isoform_11079_293	chr11	+	3843	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	63	0	63	0	multi-exon	FALSE	canonical	0	0	junction_21	67.5521189983218	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342837	121507990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
Isoform_1108_3	chr10	-	3268	14	NIC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	52	junction_5	11.6608889610075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTCCCGTCTGTTT	NA	False	NA	-3	True	NA	NA	NA	75479814	75472541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
Isoform_11080_5	chr11	+	3931	40	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	85.6471132490147	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342811	121507990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121506371_121506434_121507753
Isoform_11081_4	chr11	+	2083	18	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	11	-14972	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_17	68.3468155602866	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATCTGATTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	121342785	121452036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121451693
Isoform_11085_63	chr11	+	2424	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5026	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1430	False	NA	18	True	TATAAA	-20	NA	87739014	87754629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_11086_43	chr11	+	2317	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5029	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	42.5595171495166	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1427	False	NA	18	True	TATAAA	-20	NA	87739011	87754629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_11087_26	chr11	+	2697	19	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-5017	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.9924235901289	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1439	False	NA	18	True	TATAAA	-20	NA	87739023	87754629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87739055_87743873_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_11088_4	chr11	+	1797	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	1023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	270.059697104177	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4654670	4683546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4683289_4683311
Isoform_11089_110	chr11	+	790	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654670	4687669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_1109_5	chr10	-	2334	9	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	35.6578795639898	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTCTCTGCCTCTTTG	NA	False	NA	-10	True	AATAAA	-7	NA	75503938	75481951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75503848
Isoform_11091_33	chr11	+	837	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654623	4687669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_11093_23	chr11	+	2649	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	13.6358901432946	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAATATTCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-25	NA	119246407	119271880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
Isoform_111_10	ERCC-00126	+	1109	1	FSM	ERCC-00126A	DQ459427	1111	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00126_+_0_1100
Isoform_1110_3	chr10	-	5013	23	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-10	74109	-10	1098	5prime_fragment	FALSE	canonical	3	63	junction_21	9.9474860813596	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATTAGTCGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	75600160	75556054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_11100_24	chr11	+	2925	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	196.831569283656	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117217247	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_117217386_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_11102_4	chr11	+	2673	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8369	1633	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGAAAAGAAAGAAAA	9487	False	NA	NA	False	NA	NA	NA	104200489	104220894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
Isoform_11105_30	chr11	+	2325	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1285	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	266.148872291848	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAAGTGTGGTCTTTGC	NA	False	NA	15	True	AATAAA	-20	NA	57993693	58009421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_11107_19	chr11	+	987	2	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79864560	79866012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_79864672_79865136
Isoform_11108_8	chr11	+	1046	2	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTTGGTTGATCAC	NA	False	NA	22	True	NA	NA	NA	79864501	79866012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_79864672_79865136
Isoform_1111_6	chr10	-	2132	11	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-11	96789	-11	7165	5prime_fragment	FALSE	canonical	3	63	junction_9	9.60676844729798	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGTGGAGGAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	75600161	75578734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
Isoform_11111_24	chr11	+	1260	7	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-3	-277	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	85.6536955160462	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721501	60748972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_11113_8	chr11	+	2491	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-4995	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	43.1100627307653	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1461	False	NA	18	True	TATAAA	-20	NA	87739045	87754629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87739153_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_11114_7	chr11	+	2391	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5007	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4731634455972	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTCTGTGGACTCTCGT	1449	False	NA	16	True	TATAAA	-18	NA	87739033	87754627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_87739153_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
Isoform_11116_29	chr11	+	2719	3	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	42.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49141491	49153849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_49141634_49142376_49142502_49151397
Isoform_11117_26	chr11	+	2453	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26174	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	1699	False	NA	8	True	AATAAA	-19	NA	32564768	32574594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
Isoform_11118_24	chr11	+	2852	10	NNC	ENSMUSG00000059248.14	novel	2924	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	202.139360312766	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTTTTTTTCTGG	NA	False	NA	83	True	AATAAA	-8	NA	117222529	117253131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_117222595_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
Isoform_11119_3	chr11	+	1834	13	NNC	ENSMUSG00000020721.17	novel	687	5	NA	NA	-959	-26863	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	42.6708982276628	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAACAAAAGACTATG	9459	False	NA	NA	False	NA	NA	NA	107437796	107510057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808
Isoform_11120_3	chr11	+	2396	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1436	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	5677	False	NA	6	True	AATAAA	-9	NA	70546591	70553332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_11121_6	chr11	+	2220	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1254	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	5859	False	NA	12	True	AATAAA	-15	NA	70546773	70553338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_11123_9	chr11	+	3900	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-492	1	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107259	106139966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
Isoform_11129_16	chr11	+	537	5	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	2667	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	436.370542085508	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120596006	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_120596144_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_1113_161	chr10	-	611	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	38	0	38	0	multi-exon	FALSE	canonical	3	462	junction_2	12	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGACTTCTTTGCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	75609210	75607066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75607341_75608571_75608748_75609049
Isoform_11130_8	chr11	+	1521	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1272	-4	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	5841	False	NA	6	True	AATAAA	-9	NA	70546755	70553332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_11131_3	chr11	+	1861	13	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1272	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.613909190781	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	5841	False	NA	11	True	AATAAA	-14	NA	70546755	70553337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70546896_70547271_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_11132_10	chr11	+	1465	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCTCAAGTCTAT	NA	False	NA	16	True	AATAAA	-22	NA	96920944	96924783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_11133_4	chr11	+	1524	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	58	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGATCTCAAGTCTA	NA	False	NA	15	True	AATAAA	-21	NA	96920884	96924782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
Isoform_11134_7	chr11	+	2705	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3439	-87	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGCTAATTACTGTAT	9837	False	NA	34	True	AATAAA	-37	NA	75448207	75464622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_11135_3	chr11	+	2851	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3600	-102	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTCCTCACGTATC	9676	False	NA	19	True	AATAAA	-22	NA	75448046	75464607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_11136_5	chr11	+	1253	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53082	-515	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	112	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCTGGGCCCACACCT	NA	False	NA	23	True	AATAAA	-27	NA	62402515	62404728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_62402636_62402963_62403098_62403729
Isoform_11138_10	chr11	+	1330	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-808	4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTACTGGAAAATGTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	100331934	100347852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_100332042_100337946_100338565_100347109_100347260_100347397
Isoform_11139_9	chr11	+	2204	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	133.201631207028	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268623	50277355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_11140_7	chr11	+	602	5	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	-580	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	432.921759674886	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	217	False	NA	14	True	AATAAA	-18	NA	120598903	120600271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_120599106_120599483_120599536_120599755_120599826_120599896_120600073_120600169
Isoform_11141_9	chr11	+	2302	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-63	-1	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_1	21.0108453257306	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGTATTTACTGGG	NA	False	NA	4	True	AATAAA	-15	NA	116744057	116765537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_116744166_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
Isoform_11142_7	chr11	+	647	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1413	37	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGTGAAATGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	95898127	95898918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_95898430_95898573
Isoform_1115_10	chr10	-	1553	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	318	9	-46	-9	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTAATGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-14	NA	75616930	75609957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
Isoform_11150_8	chr11	+	2541	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26160	7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	27.0102861065105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGTTGTTCTTTCTGG	1685	False	NA	8	True	AATAAA	-19	NA	32564754	32574594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_32564885_32565780_32565907_32567848_32567963_32572423
Isoform_11151_5	chr11	+	922	2	NNC	ENSMUSG00000086591.2	novel	859	2	NA	NA	3798	6	intron_retention	FALSE	canonical	3	26	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAACGATGTCTAGAA	2371	False	NA	NA	False	AATAAA	-24	NA	69343171	69344508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_69343301_69343715
Isoform_11152_6	chr11	+	2204	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1612	-10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAATGCCTATCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	94100667	94106311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_94100872_94104311
Isoform_11153_6	chr11	+	2341	9	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	1893	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	90.0728004172181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98832430	98864988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_98832485_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
Isoform_11154_6	chr11	+	1066	5	NNC	ENSMUSG00000000581.9	novel	416	2	NA	NA	-9408	604	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	283.165146160328	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACACGGTTGTATGTC	NA	False	NA	20	True	AATAAA	-21	NA	17198170	17217228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_17198269_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_11156_5	chr11	+	2442	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	28571	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.0647162361755	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAACCCTCT	7169	False	NA	NA	False	AAAACA	-13	NA	19933140	19972578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_19933245_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_11159_5	chr11	+	594	2	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	533	False	NA	NA	False	NA	NA	NA	4883737	4884900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_4883884_4884452
Isoform_1116_3	chr10	-	1023	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	11	3	11	-3	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTCCGTGTTGTTTC	9587	False	NA	NA	False	AATAAA	-21	NA	75634407	75619649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
Isoform_11160_3	chr11	+	1417	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1086	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6393095433328	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	6027	False	NA	6	True	AATAAA	-9	NA	70546941	70553332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70546978_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_11161_3	chr11	+	902	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2325	-28	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAAGACT	NA	False	NA	-9	True	NA	NA	NA	78138896	78146294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_78138984_78141841_78142039_78145676
Isoform_11165_3	chr11	+	1846	2	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAACGTGGTGCTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	62685587	62689372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_62685789_62687727
Isoform_11168_3	chr11	-	3128	1	FSM	ENSMUSG00000049755.15	ENSMUST00000185661.2	3125	1	-2	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	58221167	58218039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58218000_58221200
Isoform_11169_7	chr11	+	927	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	-1	1220	-1	-1220	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGTTTTGCTGGTT	NA	False	NA	9	True	TATAAA	-25	NA	58845509	58846436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58845500_58846400
Isoform_1117_6	chr10	-	953	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	414	3	-4	-3	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTTTTTTTCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	75670301	75667681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
Isoform_11171_3	chr11	+	1085	1	NIC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	12	-12243	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAACCTTTGTCCT	1701	False	NA	NA	False	ACTAAA	-16	NA	58868953	58870038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58869000_58870000
Isoform_11175_3	chr11	-	182	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59792484	59792302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_59792300_59792500
Isoform_11177_22	chr11	-	176	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60184585	60184409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_60184400_60184600
Isoform_1118_5	chr10	-	1009	6	NNC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	-697	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	16.6805275695944	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTTTTTTTCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	75671412	75667681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670242_75671296
Isoform_11181_3	chr11	-	2315	1	Antisense	novelGene_ENSMUSG00000042650.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	60428703	60426388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_60426400_60428700
Isoform_11182_3	chr11	-	2142	1	Antisense	novelGene_ENSMUSG00000042650.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGTCTCAGCACTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	60430039	60427897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_60427900_60430000
Isoform_11183_4	chr11	+	879	1	NIC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-51	-5397	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	60590619	60591498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_60590600_60591500
Isoform_11184_3	chr11	-	1072	1	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	16	-14445	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGGGTCTCACGATGT	NA	False	NA	NA	False	NA	NA	NA	60668074	60667002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60667000_60668100
Isoform_11185_15	chr11	+	3547	1	FSM	ENSMUSG00000049323.9	ENSMUST00000102667.5	3544	1	6	-9	5	9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTCATTGAATGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	60668355	60671902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60668400_60671900
Isoform_11186_4	chr11	+	2735	2	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-10	-24992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	60721494	60724257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60723878_60723905
Isoform_11188_4	chr11	-	836	1	NIC	ENSMUSG00000043284.13	novel	1511	3	NA	NA	1	-12964	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGGAAAAGAAAAAAA	7835	False	NA	NA	False	NA	NA	NA	60769612	60768776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60768800_60769600
Isoform_11189_3	chr11	+	171	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAGCGAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	60771903	60772074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_60771900_60772100
Isoform_11190_6	chr11	+	179	1	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	495	False	NA	NA	False	NA	NA	NA	60778077	60778256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_60778100_60778300
Isoform_11192_4	chr11	-	930	1	ISM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	9974	47	9974	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAATAAAAATAAA	6597	False	NA	NA	False	NA	NA	NA	60812719	60811789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_60811800_60812700
Isoform_11193_12	chr11	+	2650	1	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	3	-7410	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	60822882	60825532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_60822900_60825500
Isoform_11194_7	chr11	-	222	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61394125	61393903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_61393900_61394100
Isoform_11195_4	chr11	-	225	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATCTGGATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	61728936	61728711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_61728700_61728900
Isoform_11197_9	chr11	-	726	1	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	7	-13419	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62172194	62171468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62171500_62172200
Isoform_11200_9	chr11	-	1724	1	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	-35858	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62348137	62346413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62346400_62348100
Isoform_11201_9	chr11	+	2050	1	Genic_Genomic	ENSMUSG00000014245.9	novel	NA	NA	NA	NA	-1065	-52794	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTTTTTTCCCATGTGG	NA	False	NA	17	True	NA	NA	NA	62348220	62350270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_62348200_62350300
Isoform_11202_4	chr11	+	886	1	NIC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53082	337	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62402515	62403401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_62402500_62403400
Isoform_11203_3	chr8	-	176	1	Intergenic	novelGene_1932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80509935	80509759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_80509800_80509900
Isoform_11204_22	chr11	-	1256	1	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	20	-3868	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATGAAATATAA	8391	False	NA	NA	False	ATTAAA	-19	NA	62430067	62428811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62428800_62430100
Isoform_11206_6	chr11	+	1708	1	NIC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-172	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGTGTCACTTGTGAA	NA	False	NA	23	True	AATAAA	-22	NA	62442329	62444037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_62442300_62444000
Isoform_11211_19	chr11	+	211	1	FSM	ENSMUSG00000064437.4	ENSMUST00000082503.4	72	1	-202	63	-202	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAGAAAAAAAAGGAAGT	NA	False	NA	22	True	NA	NA	NA	62493702	62493913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62493700_62493900
Isoform_11214_11	chr11	-	696	1	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	0	-68052	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATCAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65679112	65678416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_65678400_65679100
Isoform_11215_6	chr11	+	183	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTGGAGTATT	NA	False	NA	NA	False	NA	NA	NA	66412191	66412374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_66412200_66412400
Isoform_11216_19	chr11	+	176	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAATAGATAT	NA	False	NA	NA	False	NA	NA	NA	66880712	66880888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_66880700_66880900
Isoform_11217_13	chrX	+	183	1	Intergenic	novelGene_2148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21338591	21338774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_21338600_21338800
Isoform_11221_9	chr11	-	1153	1	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	7	-12062	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAAAAACCCCA	NA	False	NA	NA	False	AGTAAA	-8	NA	68743954	68742801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_68742800_68744000
Isoform_11223_3	chr11	-	177	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAGAATGTTG	8203	False	NA	NA	False	NA	NA	NA	68817116	68816939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_68816900_68817100
Isoform_11224_3	chr11	-	176	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGGA	2455	False	NA	NA	False	NA	NA	NA	5077342	5077166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_5077200_5077300
Isoform_11228_3	chr11	-	1841	1	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	9	-9647	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATATAAATACATCT	NA	False	NA	NA	False	NA	NA	NA	68899268	68897427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_68897400_68899300
Isoform_11229_5	chr11	-	2111	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	CATAAA	-16	NA	68903300	68901189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_68901200_68903300
Isoform_11231_6	chr11	-	3785	1	NIC	ENSMUSG00000034164.18	novel	1947	15	NA	NA	6	-13039	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAACAAG	7888	False	NA	NA	False	NA	NA	NA	5102231	5098446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5098400_5102200
Isoform_11232_11	chr11	+	1890	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	-29	1	-29	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGAGCCTGTTTTTTTG	NA	False	NA	16	True	ATTAAA	-16	NA	68950513	68952403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68950500_68952400
Isoform_11235_11	chr11	-	227	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTATTGTATGAAAG	7114	False	NA	NA	False	NA	NA	NA	68966738	68966511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_68966500_68966700
Isoform_11236_3	chr11	-	177	1	ISM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	13418	317	12959	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	69075251	69075074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69075100_69075300
Isoform_11237_3	chr11	-	2260	1	Genic_Genomic	ENSMUSG00000032782.20	novel	NA	NA	NA	NA	-68	-6392	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69214669	69212409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_69212400_69214700
Isoform_11239_4	chr11	+	1296	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69264596	69265892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_69264600_69265900
Isoform_1124_1856	chr10	-	544	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	-3	3	-3	-3	multi-exon	FALSE	canonical	3	12818	junction_1	2119	1856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGTTGCCTCAGCTTCT	NA	False	NA	-13	True	AATAAA	-15	NA	75696077	75695189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75695378_75695520_75695694_75695894
Isoform_11240_13	chr11	+	218	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9114	False	NA	NA	False	NA	NA	NA	69432450	69432668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_69432400_69432700
Isoform_11244_5	chr11	+	421	1	Antisense	novelGene_ENSMUSG00000059796.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACAAAAACAAGATGT	NA	False	NA	NA	False	AAAAAG	-1	NA	69557762	69558183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_69557800_69558200
Isoform_11247_24	chr11	+	226	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCTGCATATCTTTTT	2952	False	NA	NA	False	NA	NA	NA	69594451	69594677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_69594500_69594700
Isoform_11248_10	chr11	+	217	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-13	NA	69614382	69614599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_69614400_69614600
Isoform_11249_4	chr11	-	443	1	ISM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	24195	3	2906	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGTATGTGTACTGA	6070	False	NA	-6	True	AATAAA	-19	NA	69625268	69624825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69624800_69625300
Isoform_11250_4	chr11	-	542	1	ISM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	24094	5	2805	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTCTGTATGTGTACT	5969	False	NA	-8	True	AATAAA	-17	NA	69625369	69624827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69624800_69625400
Isoform_11251_6	chr11	-	1635	1	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	4	-15374	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	69649459	69647824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69647800_69649500
Isoform_11254_4	chr11	-	2071	1	Genic_Genomic	ENSMUSG00000089876.4	novel	NA	NA	NA	NA	-42	7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAAGTGTTTCCTTTGG	NA	False	NA	1	True	ATTAAA	-19	NA	69696492	69694421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_69694400_69696500
Isoform_11256_8	chr11	+	286	1	Antisense	novelGene_ENSMUSG00000078812.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAATCCAGCTTTCTG	6764	False	NA	NA	False	GATAAA	-16	NA	69807548	69807834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_69807500_69807800
Isoform_11262_5	chr11	+	2296	1	NIC	ENSMUSG00000040938.17	novel	1938	7	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTCTTGAGAGTTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	70104940	70107236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70104900_70107200
Isoform_11264_3	chr11	+	237	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGGAAAAAAAGGAAGAGG	7237	False	NA	NA	False	NA	NA	NA	70518332	70518569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_70518300_70518600
Isoform_11269_3	chr11	+	806	1	Antisense	novelGene_ENSMUSG00000018293.5_AS_novelGene_ENSMUSG00000087523.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAGAAAAAAAAAAAA	4035	False	NA	NA	False	NA	NA	NA	70544949	70545755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_70544900_70545800
Isoform_11270_9	chr11	-	3320	1	NIC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-4	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70560120	70556800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_70556800_70560100
Isoform_11276_12	chr11	-	199	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2080	False	NA	NA	False	NA	NA	NA	72487886	72487687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_72487700_72487900
Isoform_11277_6	chr11	-	1343	1	Antisense	novelGene_ENSMUSG00000020794.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTTGTTTCTTCTTTC	3839	False	NA	NA	False	AATAAA	-39	NA	72498604	72497261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_72497300_72498600
Isoform_11279_8	chr2	-	217	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTACTTGTAAGTCTC	NA	False	NA	NA	False	TATAAA	-12	NA	28339146	28338929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_28338900_28339100
Isoform_11280_3	chr11	-	3114	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	4	-308	4	308	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTGGCTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73029116	73026002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73026000_73029100
Isoform_11281_58	chr11	-	2800	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGATTTGGCTTATT	NA	False	NA	-6	True	AATAAA	-18	NA	73029109	73026309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73026300_73029100
Isoform_11291_4	chr11	-	172	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	74526360	74526188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_74526200_74526400
Isoform_11297_5	chr11	+	1384	1	NIC	ENSMUSG00000010554.15	novel	2073	11	NA	NA	-40	-1362	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAAAGCTTAA	8540	False	NA	NA	False	NA	NA	NA	74661701	74663085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_74661700_74663100
Isoform_11299_3	chr11	-	1049	1	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-3	-13513	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	74816489	74815440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_74815400_74816500
Isoform_11302_4	chr11	-	175	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAATGAC	NA	False	NA	NA	False	NA	NA	NA	74984602	74984427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_74984400_74984600
Isoform_11303_3	chr11	-	1271	2	Genic_Genomic	ENSMUSG00000078789.10	novel	2139	13	NA	NA	32	-8345	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75081313	75079995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_75080127_75080173
Isoform_11304_6	chr11	-	182	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	75144631	75144449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_75144400_75144600
Isoform_11305_5	chr8	+	174	1	Intergenic	novelGene_1952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	106739094	106739268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_106739100_106739300
Isoform_11307_3	chr11	+	180	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAGAAAGGGAGAG	NA	False	NA	NA	False	NA	NA	NA	75347024	75347204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_75347000_75347200
Isoform_11308_4	chr11	+	187	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTTATTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	75369383	75369570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_75369400_75369600
Isoform_11309_9	chr11	+	2020	1	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	12	-5084	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75377657	75379677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75377700_75379700
Isoform_1131_184	chr10	-	1638	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	17	5	-11	1	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTGCAGTAGCATAA	6878	False	NA	-7	True	AATAAA	-15	NA	75757434	75732607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
Isoform_11310_1338	chr11	-	399	1	FSM	ENSMUSG00000081485.6	ENSMUST00000122170.2	192	1	-92	-115	-92	115	mono-exon	FALSE	NA	NA	NA	NA	NA	1338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	75490872	75490473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75490500_75490900
Isoform_11311_3	chr17	+	326	1	FSM	ENSMUSG00000057580.5	ENSMUST00000170379.2	372	1	-14	60	-14	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTATCACAAAAA	4018	False	NA	NA	False	AATAAA	-11	NA	26120815	26121141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26120800_26121100
Isoform_11313_10	chr11	+	172	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGACAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	5694845	5695017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_5694800_5695000
Isoform_11315_7	chr11	+	1538	1	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	17	-4584	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	8860	False	NA	NA	False	NA	NA	NA	75542352	75543890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75542400_75543900
Isoform_11316_6	chr11	-	175	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5708438	5708263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_5708300_5708400
Isoform_11318_3	chr11	-	592	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAAGA	7148	False	NA	NA	False	NA	NA	NA	75623654	75623062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_75623100_75623700
Isoform_1132_606	chr10	-	1589	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	36	-3	11	1	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTGCAGTAGCATAA	6900	False	NA	-7	True	AATAAA	-15	NA	75757412	75732607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
Isoform_11327_8	chr11	-	176	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATCCAAATCT	NA	False	NA	NA	False	NA	NA	NA	75887451	75887275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_75887300_75887500
Isoform_1133_113	chr10	-	1611	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	14	-3	-11	1	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTGCAGTAGCATAA	6878	False	NA	-7	True	AATAAA	-15	NA	75757434	75732607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
Isoform_11330_3	chr11	+	175	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	76291785	76291960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_76291800_76292000
Isoform_11331_11	chr11	+	180	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76302256	76302436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_76302300_76302400
Isoform_11334_4	chr11	+	181	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	76575405	76575586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_76575400_76575600
Isoform_11335_6	chr11	-	180	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTTGGCTCAAAGTT	NA	False	NA	-9	True	NA	NA	NA	76813416	76813236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_76813200_76813400
Isoform_11336_8	chr11	+	175	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	77280604	77280779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_77280600_77280800
Isoform_11338_4	chr11	-	1124	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	55215	6	55215	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGTCTGCTCACTTT	NA	False	NA	-4	True	AATAAA	-13	NA	77421117	77419993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_77420000_77421100
Isoform_11341_4	chr11	+	256	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCTGAAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	77554183	77554439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_77554200_77554400
Isoform_11342_7	chr11	+	719	1	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-5	-4833	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	77576992	77577711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_77577000_77577700
Isoform_11343_4	chr11	-	343	1	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-7	-2707	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	9578	False	NA	NA	False	AAGAAA	-43	NA	5828219	5827876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5827900_5828200
Isoform_11347_13	chr11	-	913	1	NIC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	11	-4929	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAGAGA	NA	False	NA	NA	False	CATAAA	-30	NA	77971198	77970285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77970300_77971200
Isoform_11348_9	chr11	-	175	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTGTAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	77977884	77977709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_77977700_77977900
Isoform_11352_3	chr11	-	770	1	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	0	-4671	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAAAGCAG	6296	False	NA	NA	False	NA	NA	NA	78067453	78066683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78066700_78067500
Isoform_11354_8	chr11	-	2077	1	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	293	-36590	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAACCAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	78136520	78134443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78134400_78136500
Isoform_11355_9	chr11	-	228	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATATTTAAACACAGTTT	9955	False	NA	NA	False	NA	NA	NA	78150964	78150736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_78150700_78151000
Isoform_11356_4	chr11	-	2292	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	52	-1120	52	1120	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAGAATGAAAGA	6647	False	NA	NA	False	NA	NA	NA	78642503	78640211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78640200_78642500
Isoform_11357_188	chr11	-	1175	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	49	0	49	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	6644	False	NA	-2	True	AATAAA	-37	NA	78642506	78641331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78641300_78642500
Isoform_1136_62	chr10	-	1790	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	3	0	-2	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5083	False	NA	-6	True	ATTAAA	-14	NA	75768309	75759058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_11360_5	chr11	-	199	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAATACTAAAA	NA	False	NA	NA	False	NA	NA	NA	78872525	78872326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_78872300_78872500
Isoform_11361_115	chr11	-	177	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	79276658	79276481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_79276500_79276700
Isoform_11362_33	chr11	-	456	1	FSM	ENSMUSG00000083022.2	ENSMUST00000117476.2	393	1	-26	-37	-26	37	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	-14	True	AATAAA	-20	NA	6123062	6122606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6122600_6123100
Isoform_11365_3	chr11	-	212	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCCCCTATTGAGCA	NA	False	NA	NA	False	NA	NA	NA	79606897	79606685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_79606700_79606900
Isoform_11367_4	chr11	+	574	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAAGCTACTGTTCAC	NA	False	NA	12	True	AATAAA	-22	NA	79865029	79865603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_79865000_79865600
Isoform_11368_12	chr11	-	273	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAGATAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79880059	79879786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_79879800_79880100
Isoform_11369_4	chr11	-	748	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79883674	79882926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_79882900_79883700
Isoform_11370_3	chr11	+	196	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3277889	3278085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_3277900_3278100
Isoform_11374_3	chr11	-	187	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80170661	80170474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_80170500_80170700
Isoform_11375_3	chr11	+	185	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAGGAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	80269441	80269626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_80269400_80269600
Isoform_11376_3	chr11	+	760	1	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	14192	-739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAAAAAGATAT	NA	False	NA	NA	False	NA	NA	NA	80294148	80294908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_80294100_80294900
Isoform_11377_15	chr11	-	177	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTCCTCGAGACA	NA	False	NA	-4	True	NA	NA	NA	80317444	80317267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_80317300_80317400
Isoform_11380_10	chr11	-	208	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAAGGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	80357474	80357266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_80357300_80357500
Isoform_11381_30	chr11	+	1586	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGATGGGTATTCT	NA	False	NA	NA	False	CATAAA	-16	NA	82655170	82656756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82655200_82656800
Isoform_11383_19	chr11	+	2532	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	0	-941	0	941	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAAGAAGTCTGTGAC	NA	False	NA	68	True	AATAAA	-21	NA	82655170	82657702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82655200_82657700
Isoform_1139_320	chr10	-	2260	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	27	1	0	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCTGTCTGTTTTTCTT	5083	False	NA	-4	True	ATTAAA	-16	NA	75768309	75759056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_11391_3	chr11	+	2926	1	FSM	ENSMUSG00000065715.3	ENSMUST00000083781.3	97	1	-2603	-226	-2603	226	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGGTATTTGTTTGG	5850	False	NA	4	True	ATTAAA	-13	NA	83182526	83185452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83182500_83185500
Isoform_11392_3	chr11	+	3500	1	NIC	ENSMUSG00000020680.16	novel	881	7	NA	NA	-4	-5880	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAAAAAATCTAG	8675	False	NA	NA	False	NA	NA	NA	83363932	83367432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_83363900_83367400
Isoform_11394_3	chr11	+	1476	1	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-2	-630	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	4033	False	NA	NA	False	NA	NA	NA	83644537	83646013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_83644500_83646000
Isoform_11395_4	chr11	+	1812	1	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	51	-8237	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83832938	83834750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_83832900_83834800
Isoform_11396_6	chr11	+	2116	1	ISM	ENSMUSG00000034940.16	ENSMUST00000092834.12	7115	20	78032	3	15805	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGGTGTCTGTTCTGA	NA	False	NA	20	True	AATAAA	-30	NA	83933285	83935401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83933300_83935400
Isoform_11397_4	chr11	-	1584	1	NIC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	11	-2918	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCTAGAAAACTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84710330	84708746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84708700_84710300
Isoform_11398_6	chr11	+	1549	1	Antisense	novelGene_ENSMUSG00000018405.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGGCTCCAACTTATT	NA	False	NA	7	True	NA	NA	NA	84709635	84711184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_84709600_84711200
Isoform_11399_4	chr11	-	1175	1	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	149	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTAGTTA	NA	False	NA	NA	False	NA	NA	NA	84760879	84759704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84759700_84760900
Isoform_1140_31	chr10	-	2288	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	-3	3	-3	-2	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5053	False	NA	-6	True	ATTAAA	-14	NA	75768339	75759058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_11400_12	chr11	+	761	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATCTTAAGGACAGATC	NA	False	NA	9	True	AATAAA	-24	NA	84761696	84762457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_84761700_84762500
Isoform_11401_8	chr11	+	868	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	116	True	TTTAAA	-39	NA	84761696	84762564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_84761700_84762600
Isoform_11402_4	chr11	-	176	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGTGCTG	8639	False	NA	NA	False	NA	NA	NA	85074842	85074666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_85074700_85074800
Isoform_11403_5	chr11	-	2711	1	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	45144	14	45144	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCGTAGTGTATGCTTC	2669	False	NA	-14	True	AATAAA	-11	NA	85080812	85078101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_85078100_85080800
Isoform_11404_6	chr11	+	218	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTTGGGGTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	85393983	85394201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_85394000_85394200
Isoform_11407_3	chr11	-	2611	1	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	429	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	86148367	86145756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_86145800_86148400
Isoform_11410_3	chr11	-	442	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGATACTACAAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	86375264	86374822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_86374800_86375300
Isoform_11411_7	chr7	+	643	8	Antisense	novelGene_ENSMUSG00000065219.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGAAAGGAGGAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	44775352	44778151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_44775462_44775542_44775662_44775901_44775964_44776134_44776221_44776416_44776517_44776632_44776703_44776923_44776995_44778125
Isoform_11412_5	chr11	-	347	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	86551357	86551010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_86551000_86551400
Isoform_11413_7	chr11	-	607	1	NIC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	0	-18576	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9872	False	NA	NA	False	NA	NA	NA	86574662	86574055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_86574100_86574700
Isoform_11416_5	chr11	-	2039	1	Genic_Genomic	ENSMUSG00000018427.9	novel	NA	NA	NA	NA	-15	-51085	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86884548	86882509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_86882500_86884500
Isoform_11417_4	chr11	-	240	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCCCCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	86914202	86913962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_86914000_86914200
Isoform_11419_3	chr11	+	929	1	NIC	ENSMUSG00000020492.12	novel	3037	4	NA	NA	30	-11898	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATACCAAGAT	NA	False	NA	NA	False	NA	NA	NA	87000106	87001035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87000100_87001000
Isoform_1142_14	chr10	-	2993	7	NIC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	194	junction_2	15.0489940601431	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCTGTCTGTTTTTCTT	5083	False	NA	-4	True	ATTAAA	-16	NA	75768309	75759056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
Isoform_11420_3	chr11	+	177	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCCCATGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	46043746	46043923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_46043700_46043900
Isoform_11421_8	chr11	-	186	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGTGGGAGGGGCC	NA	False	NA	-10	True	NA	NA	NA	87226232	87226046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_87226000_87226200
Isoform_11422_4	chr11	+	1124	1	FSM	ENSMUSG00002076650.1	ENSMUST00020182758.1	216	1	76	-984	76	984	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAATA	2495	False	NA	NA	False	NA	NA	NA	87334138	87335262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_87334100_87335300
Isoform_11423_3	chr11	-	1020	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	110	7189	110	-7189	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	6425807	6424787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6424800_6425800
Isoform_11424_3	chr11	-	174	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGGAAGCAAGAGA	NA	False	NA	-1	True	NA	NA	NA	87374929	87374755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_87374800_87374900
Isoform_11425_6	chr11	-	3181	1	FSM	ENSMUSG00000064513.3	ENSMUST00000082579.3	133	1	-606	-2442	-606	2442	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478771	6475590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6475600_6478800
Isoform_11426_7	chr11	+	527	1	NIC	ENSMUSG00000084796.2	novel	269	2	NA	NA	0	-1167	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87646402	87646929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_87646400_87646900
Isoform_11428_3	chr11	-	162	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	4305	False	NA	NA	False	NA	NA	NA	88390368	88390206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_88390200_88390400
Isoform_11430_11	chr11	-	177	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	88852779	88852602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_88852600_88852800
Isoform_11432_4	chr9	+	176	1	ISM	ENSMUSG00000096356.4	ENSMUST00000217286.2	5673	2	2431	3441	1937	1077	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38028924	38029100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_38028900_38029100
Isoform_11433_3	chr11	+	2681	1	NIC	ENSMUSG00000000275.17	novel	1433	5	NA	NA	22	-11624	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88890223	88892904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_88890200_88892900
Isoform_11436_3	chr11	+	2003	1	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	18914	1	18914	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACATTGTCCTGCCTTTT	3184	False	NA	23	True	NA	NA	NA	88909115	88911118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_88909100_88911100
Isoform_11438_3	chr11	-	323	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88936512	88936189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_88936200_88936500
Isoform_1144_3	chr10	-	1237	7	FSM	ENSMUSG00000050157.7	ENSMUST00000219979.2	714	7	-70	-453	-9	0	multi-exon	FALSE	canonical	3	20	junction_5	8.23441288469042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	4907	False	NA	NA	False	AGTAAA	-42	NA	75776515	75773556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775546_75775673_75775764_75775852_75776227_75776255_75776397
Isoform_11440_6	chr11	-	2483	1	NIC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	164	-18882	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAACAAACAA	3996	False	NA	NA	False	NA	NA	NA	88951410	88948927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_88948900_88951400
Isoform_11441_3	chr11	-	2668	1	NIC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	-26	-18887	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCGAAAAACCAAAAAAACA	3806	False	NA	NA	False	NA	NA	NA	88951600	88948932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_88948900_88951600
Isoform_11442_3	chr11	+	1219	1	Genic_Genomic	ENSMUSG00000020544.15	novel	NA	NA	NA	NA	-6	-5276	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGTTCATCTT	NA	False	NA	NA	False	TTTAAA	-11	NA	90528992	90530211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_90529000_90530200
Isoform_11444_4	chr11	-	3107	1	NIC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	1	-1204	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAACAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	90578426	90575319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_90575300_90578400
Isoform_1145_3	chr10	-	1066	5	ISM	ENSMUSG00000050157.7	ENSMUST00000059658.6	1221	7	674	0	613	0	3prime_fragment	FALSE	canonical	3	10	junction_3	12.6589889011722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	5590	False	NA	NA	False	AGTAAA	-42	NA	75775832	75773556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775553_75775673_75775764
Isoform_11453_4	chr11	+	178	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATTCTCCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	94293083	94293261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_94293100_94293300
Isoform_11456_5	chr11	-	934	1	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	-2234	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	4624	False	NA	NA	False	NA	NA	NA	94544569	94543635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_94543600_94544600
Isoform_11458_16	chr11	+	197	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAATTTAAAGAAAAG	265	False	NA	NA	False	NA	NA	NA	94946082	94946279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_94946100_94946300
Isoform_1146_4	chr10	-	1329	4	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	-19	-576	intron_retention	FALSE	canonical	3	20	junction_2	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	4897	False	NA	NA	False	NA	NA	NA	75776525	75774585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75775673_75775764_75775852_75776227_75776255_75776397
Isoform_11460_3	chr11	+	775	1	Genic_Genomic	ENSMUSG00000085143.2	novel	NA	NA	NA	NA	-103	-13396	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAATTAAGACTAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	95201151	95201926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_95201200_95201900
Isoform_11462_3	chr11	+	194	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	4683	False	NA	NA	False	NA	NA	NA	95671680	95671874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_95671700_95671900
Isoform_11463_9	chr11	+	178	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTTTGTCTCTGAC	4626	False	NA	NA	False	NA	NA	NA	95768250	95768428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_95768200_95768400
Isoform_11464_11	chr11	-	183	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGTAACT	NA	False	NA	NA	False	NA	NA	NA	95780796	95780613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_95780600_95780800
Isoform_11465_25	chr11	-	232	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTTTCTCTCTATGG	8696	False	NA	NA	False	NA	NA	NA	95823116	95822884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_95822900_95823100
Isoform_11466_6	chr11	-	626	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	48150	2	10045	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTGTGTCTGTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	95848616	95847990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848000_95848600
Isoform_11467_20	chr11	-	2288	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	45633	857	7528	-857	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	95851133	95848845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848800_95851100
Isoform_11468_7	chr11	-	2529	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	45394	855	7289	-855	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAAAC	NA	False	NA	NA	False	NA	NA	NA	95851372	95848843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848800_95851400
Isoform_1147_12	chr10	-	1980	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4506	-1126	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCGGGAAATGTTTGT	NA	False	NA	NA	False	TATAAA	-22	NA	75951301	75894453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
Isoform_11470_5	chr11	-	2924	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	44989	865	6884	-865	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95851777	95848853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848900_95851800
Isoform_11471_5	chr11	-	3018	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	44895	865	6790	-865	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95851871	95848853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848900_95851900
Isoform_11475_4	chr11	-	4017	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	43896	865	5791	-865	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95852870	95848853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848900_95852900
Isoform_11476_4	chr11	-	4146	1	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	43774	858	5669	-858	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	95852992	95848846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_95848800_95853000
Isoform_1148_3	chr10	-	1758	7	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	14976	2	-5106	-2	3prime_fragment	FALSE	canonical	3	10	junction_3	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCATTTTGTTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76058695	76043062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282
Isoform_11486_10	chr11	+	1313	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	1411	557	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	AAAACA	-19	NA	95898125	95899438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_95898100_95899400
Isoform_11489_3	chr11	+	335	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	95946220	95946555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_95946200_95946600
Isoform_1149_8	chr10	-	2017	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	-2	1	-2	-1	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCATTTTGTTCTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	76073673	76043061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
Isoform_11491_18	chr11	+	175	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGAGGACGG	5889	False	NA	NA	False	NA	NA	NA	96013221	96013396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_96013200_96013400
Isoform_11493_3	chr11	+	3476	1	NIC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	-205	-6779	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	8609	False	NA	NA	False	NA	NA	NA	96142264	96145740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_96142300_96145700
Isoform_11494_5	chr11	+	3319	1	NIC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	-48	-6779	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	8766	False	NA	NA	False	NA	NA	NA	96142421	96145740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_96142400_96145700
Isoform_1150_4	chr10	-	2027	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	18	7	-10	-2	multi-exon	FALSE	canonical	2	4	junction_10	3.8262252939418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCATTTTGTTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76073681	76043062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
Isoform_1151_3	chr10	-	4114	20	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	2291	2416	combination_of_known_splicesites	FALSE	canonical	3	73	junction_9	15.1117719334805	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAAAGGTAGAGTTCC	NA	False	NA	NA	False	AAGAAA	-9	NA	76276269	76237175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976
Isoform_11511_9	chr11	-	2503	1	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	33	-20957	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96868504	96866001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96866000_96868500
Isoform_11513_3	chr11	-	383	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGAACAAAAAAAAAAA	6704	False	NA	NA	False	NA	NA	NA	96962007	96961624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_96961600_96962000
Isoform_11516_7	chr11	-	224	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAACTTTTAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	97094917	97094693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_97094700_97094900
Isoform_11518_4	chr11	+	175	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	97127782	97127957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_97127800_97128000
Isoform_11520_4	chr11	-	176	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	97189694	97189518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_97189500_97189700
Isoform_11521_6	chr11	-	176	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97213768	97213592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_97213600_97213800
Isoform_11522_4	chr11	-	3153	1	ISM	ENSMUSG00000070337.5	ENSMUST00000093942.5	9219	11	15176	1579	15176	-1579	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	97227666	97224513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_97224500_97227700
Isoform_11523_5	chr11	+	175	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	97232690	97232865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_97232700_97232900
Isoform_11525_4	chr11	-	185	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	731	False	NA	NA	False	NA	NA	NA	3355452	3355267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_3355300_3355500
Isoform_11526_4811	chr11	-	2347	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	-36	3	-36	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4811	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTTTCGAGGTCCT	4905	False	NA	-16	True	AATAAA	-18	NA	97520564	97518217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97518200_97520600
Isoform_11528_161	chr11	-	2372	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	-61	3	-61	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTTTCGAGGTCCT	4880	False	NA	-16	True	AATAAA	-18	NA	97520589	97518217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97518200_97520600
Isoform_11544_6	chr11	-	334	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	9010	False	NA	NA	False	NA	NA	NA	97524151	97523817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_97523800_97524200
Isoform_11545_12	chr11	+	2735	1	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	19294	21	6656	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAATCCAAAG	NA	False	NA	-6	True	AATAAA	-13	NA	97573533	97576268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_97573500_97576300
Isoform_11546_13	chr11	+	1682	1	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	20349	19	7711	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAATCCAAAGAG	262	False	NA	-4	True	AATAAA	-15	NA	97574588	97576270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_97574600_97576300
Isoform_11548_4	chr11	-	2996	1	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	-37	509	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	97590511	97587515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97587500_97590500
Isoform_11551_15	chr11	+	2612	1	Antisense	novelGene_ENSMUSG00000018537.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	97590636	97593248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_97590600_97593200
Isoform_11552_7	chr11	-	2688	1	Genic_Genomic	ENSMUSG00000018547.9	novel	NA	NA	NA	NA	-46	-21667	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97635576	97632888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_97632900_97635600
Isoform_11554_8	chr11	+	328	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	97681829	97682157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_97681800_97682200
Isoform_11556_10	chr11	+	2651	1	ISM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	36549	0	2690	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	124	False	NA	10	True	AATAAA	-21	NA	97726939	97729590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_97726900_97729600
Isoform_11562_15	chr11	+	174	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATGTCTTACCA	217	False	NA	8	True	NA	NA	NA	97884804	97884978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_97884800_97885000
Isoform_11564_6	chr11	-	1314	1	NIC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	86	-11965	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCAGGCGGAGCCCAGA	5445	False	NA	NA	False	AATAAA	-13	NA	97944202	97942888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97942900_97944200
Isoform_11568_4	chr11	+	5429	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGACCGTGTTGCGTT	NA	False	NA	NA	False	NA	NA	NA	97958417	97963846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_97958400_97963800
Isoform_11569_5	chr11	-	1522	1	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	3	-21858	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	98084116	98082594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_98082600_98084100
Isoform_11572_3	chr11	+	204	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTAATGGAACTGAGTA	NA	False	NA	NA	False	NA	NA	NA	98097328	98097532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_98097300_98097500
Isoform_11573_5	chr11	-	2096	1	Genic_Genomic	ENSMUSG00000085944.2	novel	NA	NA	NA	NA	-6	-5476	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	98249115	98247019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_98247000_98249100
Isoform_11575_3	chr11	+	2288	1	NIC	ENSMUSG00000078676.10	novel	3963	15	NA	NA	51	1218	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	333	False	NA	NA	False	NA	NA	NA	98700684	98702972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_98700700_98703000
Isoform_11577_8	chr11	+	309	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAATTAAAAA	7721	False	NA	NA	False	NA	NA	NA	98898913	98899222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_98898900_98899200
Isoform_11584_226	chr11	-	550	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	-26	-113	-26	113	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	8050	False	NA	NA	False	NA	NA	NA	100252978	100252428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100252400_100253000
Isoform_11586_8	chr11	-	177	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	100309244	100309067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_100309100_100309200
Isoform_11588_13	chr11	+	173	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100704053	100704226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_100704100_100704200
Isoform_11593_6	chr11	-	180	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGTCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52434904	52434724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_52434700_52434900
Isoform_11597_6	chr11	-	191	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	101360696	101360505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_101360500_101360700
Isoform_11598_3	chr11	+	155	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	101511886	101512041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_101511900_101512000
Isoform_11599_14	chr11	+	440	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	0	-249	0	249	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	101518191	101518631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_101518200_101518600
Isoform_11600_6	chr11	+	205	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	101579477	101579682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_101579500_101579700
Isoform_11601_5	chr11	-	328	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5298	False	NA	NA	False	NA	NA	NA	101593967	101593639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_101593600_101594000
Isoform_11602_3	chr11	-	3996	1	Genic_Genomic	ENSMUSG00000020921.7	novel	NA	NA	NA	NA	22	159	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAC	4487	False	NA	NA	False	NA	NA	NA	102047208	102043212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_102043200_102047200
Isoform_11603_3	chr11	-	377	2	Antisense	novelGene_ENSMUSG00000034768.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAAAAAAAAC	6284	False	NA	NA	False	NA	NA	NA	102171435	102138511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_102138544_102171090
Isoform_11608_6	chr11	-	2178	1	ISM	ENSMUSG00000059995.13	ENSMUST00000145484.2	3102	7	1965	2	1965	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCGGCCTGCCCACTCT	2972	False	NA	-8	True	AATAAA	-17	NA	102182305	102180127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_102180100_102182300
Isoform_11610_5	chr11	-	981	1	Genic_Genomic	ENSMUSG00000020923.18	novel	NA	NA	NA	NA	-505	-5658	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGCAAAAA	7856	False	NA	NA	False	AAAAAG	-31	NA	102211073	102210092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_102210100_102211100
Isoform_11612_5	chr11	-	173	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAAG	7866	False	NA	NA	False	NA	NA	NA	102222280	102222107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_102222100_102222300
Isoform_11613_3	chr11	+	178	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	102230864	102231042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_102230900_102231000
Isoform_11615_17	chr11	+	2204	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	-26	1485	-26	-1485	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCATTTTATTT	NA	False	NA	NA	False	AATAAA	-9	NA	102495195	102497399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_102495200_102497400
Isoform_11618_8	chr11	-	2667	1	Genic_Genomic	ENSMUSG00000045532.6	novel	NA	NA	NA	NA	-61	-4819	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAACCAAGAATAACAAT	8598	False	NA	NA	False	NA	NA	NA	102837575	102834908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_102834900_102837600
Isoform_11621_13	chr11	+	2146	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	0	1349	0	-1349	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCAGTGTGATTTCT	NA	False	NA	9	True	AATAAA	-20	NA	103007056	103009202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_103007100_103009200
Isoform_11622_3	chr11	-	2487	1	Antisense	novelGene_ENSMUSG00000043372.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTTTTTTTTCTT	4665	False	NA	NA	False	ATTAAA	-13	NA	103023689	103021202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_103021200_103023700
Isoform_11626_4	chr11	+	669	1	Genic_Genomic	ENSMUSG00000085360.2	novel	NA	NA	NA	NA	4729	6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAGATTCCATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	103251255	103251924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_103251300_103251900
Isoform_11628_9	chr11	+	180	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103846371	103846551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_103846400_103846600
Isoform_11629_4	chr11	-	176	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGGTTACCAAA	NA	False	NA	NA	False	NA	NA	NA	103856871	103856695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_103856700_103856900
Isoform_11630_6	chr11	+	1100	1	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104178112	104179212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_104178100_104179200
Isoform_11633_4	chr11	-	189	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	3431565	3431376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_3431400_3431600
Isoform_11634_8	chr11	-	175	1	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGCAACATAAAAAATAGC	6445	False	NA	NA	False	NA	NA	NA	104539479	104539304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_104539300_104539500
Isoform_11636_13	chr11	+	1812	1	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	0	-7366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017304	105019116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_105017300_105019100
Isoform_11637_4	chr11	-	3540	1	FSM	ENSMUSG00000081965.2	ENSMUST00000118770.2	1845	1	-394	-1301	-394	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTAAGTGTCTTCTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	105057840	105054300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_105054300_105057800
Isoform_1164_15	chr10	-	4234	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	287	1	36	-1	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCTCTCGTGATTCC	NA	False	NA	NA	False	NA	NA	NA	76304661	76295401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
Isoform_11640_4	chr11	-	361	1	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	0	-11691	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	106107170	106106809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106106800_106107200
Isoform_11642_3	chr11	-	173	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	9096	False	NA	NA	False	NA	NA	NA	106336006	106335833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_106335800_106336000
Isoform_11643_28	chr11	+	291	1	FSM	ENSMUSG00000065126.3	ENSMUST00000083192.3	70	1	-78	-143	-78	143	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACCCCGCTGGTGTCTT	4511	False	NA	18	True	AATAAA	-8	NA	106391740	106392031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_106391700_106392000
Isoform_11644_106	chr11	-	178	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4956	False	NA	NA	False	NA	NA	NA	106525153	106524975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_106525000_106525200
Isoform_11647_5	chr11	+	603	1	Antisense	novelGene_ENSMUSG00000020719.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCATAGTTTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	106672372	106672975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_106672400_106673000
Isoform_11648_3	chr11	+	1605	1	Genic_Genomic	ENSMUSG00000018372.14	novel	NA	NA	NA	NA	-652	-1064	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTAGTGTCGGTGTT	4444	False	NA	NA	False	AATAAA	-14	NA	106679425	106681030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_106679400_106681000
Isoform_11649_44	chr11	+	209	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGTTTTCAGGGATTC	8130	False	NA	NA	False	TTTAAA	-8	NA	106696801	106697010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106696800_106697000
Isoform_11651_3	chr11	-	216	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106756779	106756563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_106756600_106756800
Isoform_11652_4	chr11	+	176	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAACACCCATAAA	NA	False	NA	NA	False	NA	NA	NA	106854701	106854877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106854700_106854900
Isoform_11654_27	chr11	-	178	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6822	False	NA	NA	False	NA	NA	NA	106906807	106906629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_106906600_106906800
Isoform_11655_5	chr11	+	308	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAATAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	106910778	106911086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106910800_106911100
Isoform_11656_5	chr11	+	208	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATGGGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	106988435	106988643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106988400_106988600
Isoform_11657_4	chr11	-	175	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGTTTAAAAA	2562	False	NA	NA	False	NA	NA	NA	106996930	106996755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_106996800_106996900
Isoform_11658_4	chr11	+	210	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGGTTTTTTT	2184	False	NA	NA	False	AATAAA	-14	NA	107024923	107025133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_107024900_107025100
Isoform_11659_3	chr11	-	189	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTACTTACAACTTTT	NA	False	NA	NA	False	NA	NA	NA	107271594	107271405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_107271400_107271600
Isoform_11660_5	chr11	+	173	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAGAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	107368879	107369052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_107368900_107369100
Isoform_11662_3	chr11	-	221	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	107393956	107393735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_107393700_107394000
Isoform_11663_4	chr11	-	219	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATGAGATAGGCAAAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	107470859	107470640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_107470600_107470900
Isoform_11670_4	chr11	-	173	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	109677797	109677624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_109677600_109677800
Isoform_11678_4	chr11	-	1718	1	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	14543	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	NA	False	NA	NA	False	ATTAAA	-19	NA	115141712	115139994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115140000_115141700
Isoform_11679_5	chr11	-	1659	1	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	14599	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTGGTCCTAGCTGCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	115141656	115139997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115140000_115141700
Isoform_1168_3	chr10	-	2386	4	NIC	ENSMUSG00000033126.6	novel	4522	5	NA	NA	37	-1618	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	13.7679176187089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTATATGAGTACAC	NA	False	NA	NA	False	NA	NA	NA	76304660	76297018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_76299154_76300090_76300160_76302070_76302200_76304607
Isoform_11686_3	chr11	+	370	1	Antisense	novelGene_ENSMUSG00000020738.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCGGTCATTTAGTTT	1106	False	NA	NA	False	NA	NA	NA	115413933	115414303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_115413900_115414300
Isoform_11688_6	chr11	+	176	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17899567	17899743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_17899600_17899700
Isoform_11689_4	chr11	-	278	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATGTAGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	115446121	115445843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_115445800_115446100
Isoform_11691_3	chr11	-	3605	1	NIC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	0	-11515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCCAGCACTTGGGA	NA	False	NA	NA	False	NA	NA	NA	17903875	17900270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_17900300_17903900
Isoform_11692_4	chr11	-	1308	1	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	0	-2563	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAACCCAAAAATC	NA	False	NA	NA	False	NA	NA	NA	115518971	115517663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115517700_115519000
Isoform_11694_12	chr11	-	356	1	FSM	ENSMUSG00000083394.3	ENSMUST00000118352.3	483	1	-24	151	-24	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACGACCAGAAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	115615658	115615302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115615300_115615700
Isoform_11695_3	chr11	-	181	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	115633297	115633116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_115633100_115633300
Isoform_11697_6	chr11	+	1769	1	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	14	-19043	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAACAAAA	6823	False	NA	NA	False	NA	NA	NA	115714897	115716666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_115714900_115716700
Isoform_11699_6	chr11	+	179	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTTAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	115813579	115813758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_115813600_115813800
Isoform_1170_25	chr10	-	3952	34	NIC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	138	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.3589563334811	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	8580	False	NA	-1	True	AATAAA	-14	NA	76561864	76544626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
Isoform_11706_4	chr11	+	173	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	4340	False	NA	NA	False	NA	NA	NA	115916665	115916838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_115916700_115916800
Isoform_11708_11	chr11	-	717	1	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-17	-308	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGCAAAAAACAGAAAAAAT	469	False	NA	NA	False	AGTAAA	-36	NA	116029632	116028915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116028900_116029600
Isoform_11709_5	chr9	-	175	1	Intergenic	novelGene_2021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	44208275	44208100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_44208100_44208300
Isoform_1171_75	chr10	-	2117	16	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.7172229965202	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1130	False	NA	-2	True	AATAAA	-19	NA	76797728	76597689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_11710_10	chr11	+	177	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGCCTTAACAC	8553	False	NA	NA	False	NA	NA	NA	116317390	116317567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_116317400_116317600
Isoform_11713_23	chr11	+	218	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTATTATATATATAT	NA	False	NA	NA	False	AATAAA	-14	NA	116527592	116527810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_116527600_116527800
Isoform_11717_4	chr11	+	498	1	NIC	ENSMUSG00000090266.11	novel	502	2	NA	NA	4864	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGCACCTCCTGTTTTT	NA	False	NA	11	True	AATAAA	-24	NA	116744590	116745088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_116744600_116745100
Isoform_11718_3	chr11	-	177	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATTGGAGACCT	NA	False	NA	NA	False	NA	NA	NA	116945094	116944917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_116944900_116945100
Isoform_1172_116	chr10	-	2135	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-121	-1	-22	1	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1115	False	NA	-2	True	AATAAA	-19	NA	76797743	76597689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_11721_7	chr11	+	2153	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	1	-1	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	895	False	NA	20	True	AATAAA	-16	NA	116967628	116969781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_116967600_116969800
Isoform_11723_3	chr11	+	2737	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	116994410	116997147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_116994400_116997100
Isoform_11729_23	chr11	-	177	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCGCGAG	NA	False	NA	NA	False	NA	NA	NA	117255676	117255499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_117255500_117255700
Isoform_11730_4	chr11	+	2780	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117477149	117479929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_117477100_117479900
Isoform_11731_3	chr11	-	162	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATTCAGCATCAA	NA	False	NA	-7	True	NA	NA	NA	117541385	117541223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_117541200_117541400
Isoform_1174_4	chr10	-	1235	11	ISM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-137	19858	-38	8088	5prime_fragment	FALSE	canonical	3	104	junction_6	11.0742945599257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCCTACGTCTGTTG	1099	False	NA	NA	False	NA	NA	NA	76797759	76617548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
Isoform_11745_6	chr11	-	1711	1	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	7	-4668	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118180999	118179288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_118179300_118181000
Isoform_11746_4	chr11	-	1780	1	NIC	ENSMUSG00000033909.18	novel	5609	21	NA	NA	-5	-4662	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118181062	118179282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_118179300_118181100
Isoform_11747_15	chr11	+	178	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	118227863	118228041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_118227900_118228000
Isoform_11749_3	chr11	-	1769	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118364954	118363185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_118363200_118365000
Isoform_11750_6	chr11	+	235	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	7688	False	NA	NA	False	NA	NA	NA	119097074	119097309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_119097100_119097300
Isoform_11751_5	chr11	-	604	1	NIC	ENSMUSG00000039976.5	novel	6986	12	NA	NA	13	-17242	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCCTCAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	119119312	119118708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119118700_119119300
Isoform_11752_7	chr11	-	178	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	119257666	119257488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_119257500_119257700
Isoform_11753_3	chr11	+	1972	1	NIC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	1	-7470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAGCTAAAGTAAAAAAAAA	6283	False	NA	NA	False	TTTAAA	-17	NA	119382201	119384173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_119382200_119384200
Isoform_11754_3	chr11	+	1721	1	NIC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	4	-7463	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAAAAAAATATATTT	6541	False	NA	NA	False	TTTAAA	-24	NA	119382459	119384180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_119382500_119384200
Isoform_11755_3	chr11	-	2894	1	FSM	ENSMUSG00000056579.19	ENSMUST00000193809.2	1612	1	652	-1934	21	712	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	3599021	3596127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3596100_3599000
Isoform_11757_7	chr11	-	2000	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-105	-251	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTCTCTGGCT	6038	False	NA	1	True	AATAAA	-19	NA	120080783	120078783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_120078800_120080800
Isoform_11758_4	chr11	-	2087	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-195	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTTTTCTCTCTG	5948	False	NA	-2	True	AATAAA	-16	NA	120080873	120078786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_120078800_120080900
Isoform_11759_7	chr11	-	1937	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-45	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTTTTCTCTCTG	6098	False	NA	-2	True	AATAAA	-16	NA	120080723	120078786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_120078800_120080700
Isoform_11761_10	chr11	-	768	1	NIC	ENSMUSG00000043993.7	novel	1588	2	NA	NA	51	-965	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAAAGGGA	NA	False	NA	NA	False	TTTAAA	-31	NA	120122360	120121592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120121600_120122400
Isoform_11762_5	chr11	-	819	1	NIC	ENSMUSG00000043993.7	novel	1588	2	NA	NA	0	-965	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAAAGGGA	NA	False	NA	NA	False	TTTAAA	-31	NA	120122411	120121592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120121600_120122400
Isoform_11763_10	chr4	+	249	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	103422177	103422426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_103422200_103422400
Isoform_11774_6	chr11	+	700	1	Antisense	novelGene_ENSMUSG00000020152.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGGAAAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	20012589	20013289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_20012600_20013300
Isoform_11779_5	chr11	+	621	1	Antisense	novelGene_ENSMUSG00000025130.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTACACCACCAATTA	6811	False	NA	NA	False	NA	NA	NA	120451128	120451749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_120451100_120451700
Isoform_1178_47	chr10	-	4200	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	3	860	3	-22	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5938	False	NA	-18	True	AATAAA	-17	NA	77002379	76888871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_11786_4	chr11	-	1618	1	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-4	-853	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120508743	120507125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120507100_120508700
Isoform_11788_4	chr11	+	632	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGATCAAGTTTTCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	120524575	120525207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_120524600_120525200
Isoform_1179_74	chr10	-	5030	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	31	2	31	-2	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5966	False	NA	-2	True	AATAAA	-18	NA	77002351	76888013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_11791_6	chr11	+	2591	1	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-6	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120564211	120566802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_120564200_120566800
Isoform_11792_4	chr11	-	190	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAGCCAGTAACACAG	675	False	NA	NA	False	NA	NA	NA	120580917	120580727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_120580700_120580900
Isoform_11793_5	chr11	-	2794	1	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCCTGCTTTCTCTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	120604564	120601770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120601800_120604600
Isoform_11795_85	chr11	+	1599	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	120653619	120655218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_120653600_120655200
Isoform_1180_105	chr10	-	4180	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	31	852	31	-14	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATTTACAACAGACT	5966	False	NA	-10	True	AATAAA	-25	NA	77002351	76888863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_11802_6	chr11	-	3505	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAAGAA	4478	False	NA	NA	False	NA	NA	NA	120743523	120740018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_120740000_120743500
Isoform_11803_4	chr11	+	177	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120817630	120817807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_120817600_120817800
Isoform_11806_5	chr11	-	179	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGTAAAATAG	NA	False	NA	NA	False	NA	NA	NA	121131227	121131048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121131000_121131200
Isoform_11807_4	chr11	-	198	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTCTGCTG	NA	False	NA	NA	False	AAAACA	-8	NA	121215382	121215184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121215200_121215400
Isoform_11808_4	chr11	+	2327	1	FSM	ENSMUSG00000081346.2	ENSMUST00000121917.2	223	1	-1995	-109	-1995	109	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATACTCAAAAAAAAATCT	NA	False	NA	NA	False	AATAAA	-7	NA	20090572	20092899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_20090600_20092900
Isoform_11809_5	chr11	+	178	1	Antisense	novelGene_ENSMUSG00000085035.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20095970	20096148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_20096000_20096100
Isoform_1181_39	chr10	-	5058	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	3	2	3	-2	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5938	False	NA	-2	True	AATAAA	-18	NA	77002379	76888013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_11810_6	chr11	-	1282	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121816143	121814861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121814900_121816100
Isoform_11811_3	chr11	-	908	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	121847565	121846657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121846700_121847600
Isoform_11812_10	chr11	-	179	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTCCTT	4846	False	NA	NA	False	NA	NA	NA	20148929	20148750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_20148800_20148900
Isoform_11815_3	chr11	-	621	1	NIC	ENSMUSG00000044066.15	novel	2788	3	NA	NA	0	-7286	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAATTAAAAAAATAA	3044	False	NA	NA	False	NA	NA	NA	20199429	20198808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_20198800_20199400
Isoform_11817_2567	chr5	+	1253	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-72	-179	-72	179	mono-exon	FALSE	NA	NA	NA	NA	NA	2567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	96009500	96010753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_96009500_96010800
Isoform_11827_11	chr11	-	219	1	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAATTCCTTTATTA	1899	False	NA	NA	False	NA	NA	NA	3893254	3893035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_3893000_3893300
Isoform_11828_5	chr11	-	2169	1	NIC	ENSMUSG00000051650.12	novel	3057	2	NA	NA	-156	-20950	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCGCATGGTGG	4369	False	NA	NA	False	NA	NA	NA	22809701	22807532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_22807500_22809700
Isoform_1183_5	chr10	-	5033	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	64.1984764227314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	5930	False	NA	-2	True	AATAAA	-18	NA	77002387	76888013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
Isoform_11830_19	chr11	+	2851	2	Genic_Genomic	ENSMUSG00000044068.8	novel	4492	1	NA	NA	32	393	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATTGTCTGAATCTG	NA	False	NA	9	True	AATATA	-15	NA	22922036	22924907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_22923177_22923196
Isoform_11832_3	chr11	-	197	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAACTTTTTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	23107263	23107066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_23107100_23107300
Isoform_11833_3	chr11	+	226	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATTTCATACATGTA	NA	False	NA	NA	False	NA	NA	NA	23252610	23252836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_23252600_23252800
Isoform_11834_6	chr11	-	907	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1155	False	NA	NA	False	NA	NA	NA	23256327	23255420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_23255400_23256300
Isoform_11836_4	chr11	-	179	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGGAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	23307471	23307292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_23307300_23307500
Isoform_11837_6	chr11	-	1620	1	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-52	-8199	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	23615904	23614284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_23614300_23615900
Isoform_11839_3	chr11	+	222	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGATGTGTCTGCGA	NA	False	NA	NA	False	ATTAAA	-15	NA	24055895	24056117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_24055900_24056100
Isoform_1184_3	chr10	-	3261	3	ISM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	31	41247	31	-12700	5prime_fragment	FALSE	canonical	3	360	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAACAAAAAAAA	5966	False	NA	NA	False	NA	NA	NA	77002351	76929258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_76932370_77002123_77002195_77002272
Isoform_11840_9	chr9	+	177	1	Intergenic	novelGene_2020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACAGTAT	NA	False	NA	NA	False	NA	NA	NA	44196733	44196910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_44196700_44196900
Isoform_11842_4	chr11	-	679	1	Antisense	novelGene_ENSMUSG00000004018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTATATTGTATGCT	NA	False	NA	-21	True	AATAAA	-15	NA	26337443	26336764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_26336800_26337400
Isoform_11844_3	chr11	-	1922	1	Genic_Genomic	ENSMUSG00000086725.2	novel	NA	NA	NA	NA	821	93	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTTTTATTGCGTG	NA	False	NA	NA	False	AATACA	-18	NA	29122737	29120815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_29120800_29122700
Isoform_11845_6	chr11	+	1923	1	NIC	ENSMUSG00000020459.15	novel	741	5	NA	NA	3	-1846	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29476459	29478382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_29476500_29478400
Isoform_1185_10	chr10	-	2876	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	27	3646	0	-3644	multi-exon	FALSE	canonical	2	18	junction_4	10.2024506859872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGGAATGAGATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	77254072	77130205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
Isoform_11850_3	chr11	+	2265	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	29634581	29636846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_29634600_29636800
Isoform_11851_6	chr11	+	180	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTACCCAAGAATAGC	NA	False	NA	1	True	NA	NA	NA	30432655	30432835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_30432700_30432800
Isoform_11852_4	chr11	-	190	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGAAGCAGTAATT	7289	False	NA	NA	False	NA	NA	NA	30464591	30464401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_30464400_30464600
Isoform_11853_4	chr11	+	645	1	NIC	ENSMUSG00000043999.7	novel	2926	2	NA	NA	64	-7663	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	4128	False	NA	NA	False	NA	NA	NA	30835421	30836066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_30835400_30836100
Isoform_11854_3	chr11	-	496	1	Genic_Genomic	ENSMUSG00000020309.7	novel	NA	NA	NA	NA	-3	-8906	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGTCAGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	30936353	30935857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_30935900_30936400
Isoform_11856_5	chr11	-	3781	1	Genic_Genomic	ENSMUSG00000020303.3	novel	NA	NA	NA	NA	-50	-903	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACCAGGGCTCA	NA	False	NA	NA	False	AAGAAA	-11	NA	31320124	31316343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_31316300_31320100
Isoform_11859_3	chr11	-	378	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAAATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31937015	31936637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_31936600_31937000
Isoform_11860_11	chr11	+	4722	1	NIC	ENSMUSG00000020287.16	novel	1404	5	NA	NA	-6	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32176523	32181245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32176500_32181200
Isoform_11861_4	chr11	+	173	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	32547258	32547431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_32547300_32547400
Isoform_11862_11	chr14	+	178	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6480	False	NA	NA	False	NA	NA	NA	25849084	25849262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_25849100_25849300
Isoform_11864_3	chr11	+	1383	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGTAACTCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	33463074	33464457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_33463100_33464500
Isoform_11865_19	chr11	+	475	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33484758	33485233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_33484800_33485200
Isoform_11866_3	chr6	+	182	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAAGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	90395402	90395584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_90395400_90395600
Isoform_11867_3	chr11	+	1922	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATAGGAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	33890290	33892212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_33890300_33892200
Isoform_11868_3	chr11	+	2160	1	Genic_Genomic	ENSMUSG00000018846.9	novel	NA	NA	NA	NA	-15	-19657	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35660295	35662455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_35660300_35662500
Isoform_11869_11	chr11	+	2045	1	NIC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	102	-19655	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35660412	35662457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_35660400_35662500
Isoform_1187_3	chr10	-	6514	12	NNC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.830104062241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCTGCATGGACATT	NA	False	NA	NA	False	AATAAA	-16	NA	77254106	77126566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_77127050_77127084_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
Isoform_11870_3	chr11	+	173	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAACC	9735	False	NA	NA	False	NA	NA	NA	4276405	4276578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_4276400_4276600
Isoform_11872_4	chr8	+	175	1	Intergenic	novelGene_1941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAATCAAAACC	NA	False	NA	NA	False	NA	NA	NA	89661696	89661871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_89661700_89661900
Isoform_11873_791	chr11	-	1341	1	FSM	ENSMUSG00000082087.5	ENSMUST00000122180.2	951	1	-38	-352	-38	352	mono-exon	FALSE	NA	NA	NA	NA	NA	791	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGTGAAAAAAAAAAAAGA	5818	False	NA	NA	False	AATAAA	-5	NA	40564721	40563380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40563400_40564700
Isoform_11875_9	chr11	+	2730	1	Genic_Genomic	ENSMUSG00000020328.11	novel	NA	NA	NA	NA	-9	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAGACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40624484	40627214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_+_40624500_40627200
Isoform_11879_3	chr11	+	183	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTCAAACCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	40748595	40748778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_40748600_40748800
Isoform_1188_3	chr10	-	543	4	FSM	ENSMUSG00000020262.16	ENSMUST00000150227.8	3289	4	-6	2752	-6	-14	multi-exon	FALSE	canonical	3	17	junction_1	14.8398861930347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTCAAGAAAACCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	77254078	77161376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77161526_77161699_77161775_77195400_77195570_77253928
Isoform_11881_7	chr11	+	2236	1	FSM	ENSMUSG00000058809.9	ENSMUST00000119713.2	1722	1	-60	-454	-60	454	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATCTTCA	8622	False	NA	-6	True	AATAAA	-17	NA	41389503	41391739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_41389500_41391700
Isoform_11884_5	chr11	+	198	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGAGCCATCTCTT	3183	False	NA	NA	False	NA	NA	NA	43601861	43602059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_43601900_43602100
Isoform_11886_7	chr11	-	2123	1	Genic_Genomic	ENSMUSG00000020419.12	novel	NA	NA	NA	NA	-4	-11673	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4391109	4388986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_4389000_4391100
Isoform_11887_6	chr11	-	183	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	44639134	44638951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_44639000_44639100
Isoform_1189_23	chr10	-	2448	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-56	2	-56	-2	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTCCCCTGGCTT	NA	False	NA	-9	True	AATAAA	-24	NA	77351675	77322496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
Isoform_11890_3	chr11	+	175	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTAAAAAAAATCCCATG	NA	False	NA	NA	False	NA	NA	NA	46043742	46043917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_46043700_46043900
Isoform_11891_8	chr11	-	171	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	46300001	46299830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_46299800_46300000
Isoform_11895_4	chr11	+	243	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ATTAAA	-25	NA	48664791	48665034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_48664800_48665000
Isoform_11898_3	chr11	-	179	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAATGAAGAACA	NA	False	NA	NA	False	NA	NA	NA	48853511	48853332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_48853300_48853500
Isoform_11899_3	chr8	-	710	1	Intergenic	novelGene_1994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	129473756	129473046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_129473000_129473800
Isoform_1190_199	chr10	-	2408	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-18	4	-18	-4	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGCAGTCCCCTGGC	NA	False	NA	-11	True	AATAAA	-22	NA	77351637	77322498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
Isoform_11901_1739	chr11	-	464	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	-70	-46	-70	46	mono-exon	FALSE	NA	NA	NA	NA	NA	1739	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATTAA	NA	False	NA	NA	False	AATAAA	-23	NA	49569954	49569490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_49569500_49570000
Isoform_11905_8	chr11	+	191	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	49576391	49576582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_49576400_49576600
Isoform_11907_10	chr11	+	1981	1	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	9	-7067	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50022237	50024218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50022200_50024200
Isoform_11908_5	chr11	+	3143	1	NIC	ENSMUSG00000097887.3	novel	611	2	NA	NA	-4	-23234	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8234	False	NA	NA	False	NA	NA	NA	50127834	50130977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50127800_50131000
Isoform_11909_5	chr11	-	2981	1	ISM	ENSMUSG00000050567.17	ENSMUST00000135868.8	4924	4	33186	4	33186	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCACAAGCATGTTTGA	NA	False	NA	-12	True	AATAAA	-18	NA	50149445	50146464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_50146500_50149400
Isoform_11912_7	chr11	-	2799	1	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	59	-23978	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAAACGAAACAA	8195	False	NA	NA	False	NA	NA	NA	50216441	50213642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_50213600_50216400
Isoform_11914_6	chr11	-	928	1	Antisense	novelGene_ENSMUSG00000050087.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAAAGAGA	2363	False	NA	NA	False	NA	NA	NA	50250496	50249568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_50249600_50250500
Isoform_11915_3	chr11	+	552	1	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	0	-2649	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAAACAA	NA	False	NA	NA	False	AAAAAG	-12	NA	50267816	50268368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50267800_50268400
Isoform_11916_3	chr11	-	607	1	NIC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	-9565	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	TATAAA	-17	NA	50806988	50806381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_50806400_50807000
Isoform_11917_3	chr11	-	1078	1	Genic_Genomic	ENSMUSG00000086646.8	novel	NA	NA	NA	NA	-7	-29097	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	51111252	51110174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_51110200_51111300
Isoform_11919_6	chr11	-	383	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51129624	51129241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_51129200_51129600
Isoform_11920_8	chr11	+	199	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTTAAGCATTGACAG	NA	False	NA	NA	False	NA	NA	NA	4537931	4538130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_4537900_4538100
Isoform_11921_3	chr10	+	170	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	115013105	115013275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_115013100_115013300
Isoform_11924_3	chr11	-	203	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGTGTCTGAAGA	8195	False	NA	NA	False	NA	NA	NA	51594435	51594232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_51594200_51594400
Isoform_11927_3	chr11	-	730	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	51884720	51883990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_51884000_51884700
Isoform_11929_3	chr11	-	176	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52107681	52107505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_52107500_52107700
Isoform_11931_6	chr11	-	858	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9410	False	NA	NA	False	NA	NA	NA	52249483	52248625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_52248600_52249500
Isoform_11938_3	chr11	-	2968	1	FSM	ENSMUSG00000081297.2	ENSMUST00000120089.2	596	1	-1179	-1193	-1179	1193	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	52371109	52368141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_52368100_52371100
Isoform_11939_11	chr2	-	198	1	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTAGCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	128861509	128861311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_128861300_128861500
Isoform_11940_5	chr11	-	248	1	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	40393	3	7177	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTTCTTAATTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	53150891	53150643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53150600_53150900
Isoform_11942_22	chr11	-	1073	1	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-8	-35100	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53191246	53190173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_53190200_53191200
Isoform_11945_8	chr11	-	189	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCTAATCTGATCT	NA	False	NA	NA	False	NA	NA	NA	53201426	53201237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_53201200_53201400
Isoform_11946_4	chr11	-	232	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAACATTAAAAAAAAAAG	7980	False	NA	NA	False	NA	NA	NA	53247654	53247422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_53247400_53247700
Isoform_11947_12	chr16	-	174	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	87073275	87073101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_87073100_87073300
Isoform_11949_45	chr11	-	1368	1	NIC	ENSMUSG00000044894.15	novel	1521	2	NA	NA	13	-494	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	2960	False	NA	NA	False	NA	NA	NA	53321641	53320273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_53320300_53321600
Isoform_1195_1173	chr10	-	2713	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	61	956	-10	-956	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	NA	False	NA	-27	True	AATAAA	-18	NA	77845580	77823736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_11950_3	chr11	-	2858	1	FSM	ENSMUSG00000044352.7	ENSMUST00000104955.4	3702	1	90	754	90	-754	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAACCTCAAAGT	NA	False	NA	NA	False	NA	NA	NA	53371011	53368153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53368200_53371000
Isoform_11951_8	chr11	-	232	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	53572295	53572063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_53572100_53572300
Isoform_11952_8	chr11	-	175	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTGCCCCAC	NA	False	NA	NA	False	NA	NA	NA	53737700	53737525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_53737500_53737700
Isoform_11953_8	chr11	+	351	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATAAACAAAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	53752061	53752412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_53752100_53752400
Isoform_11955_4	chr11	+	241	1	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTTGATAAAGACCACC	NA	False	NA	NA	False	NA	NA	NA	53825097	53825338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_53825100_53825300
Isoform_11956_3	chr11	-	244	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-40	NA	54413479	54413235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_54413200_54413500
Isoform_11957_13	chr11	+	684	1	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	0	-29487	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	54413714	54414398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_54413700_54414400
Isoform_11959_17	chr11	+	211	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54689591	54689802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_54689600_54689800
Isoform_1196_321	chr10	-	2736	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	36	958	-35	-958	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCACTGGGACAACAT	NA	False	NA	-29	True	AATAAA	-16	NA	77845605	77823738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_11960_3	chr11	+	705	1	Antisense	novelGene_ENSMUSG00000020268.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCAAAAAACAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	54751623	54752328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_+_54751600_54752300
Isoform_11967_12	chr11	-	698	1	Antisense	novelGene_ENSMUSG00000000594.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	55001725	55001027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_55001000_55001700
Isoform_11975_118	chr11	-	5287	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	57450920	57445633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_57445600_57450900
Isoform_1198_88	chr10	-	2781	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	61	888	-10	-888	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTATAGTTTGTTT	NA	False	NA	-4	True	NA	NA	NA	77845580	77823668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_120_13068	ERCC-00130	+	1049	1	FSM	ERCC-00130A	EF011072	1051	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13068	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00130_+_0_1100
Isoform_1200_27	chr10	-	2820	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	22	888	22	-888	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTATAGTTTGTTT	NA	False	NA	-4	True	NA	NA	NA	77845619	77823668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
Isoform_12000_4	chr11	-	178	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAAAGCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	57809348	57809170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_57809200_57809300
Isoform_12002_5	chr11	+	2523	1	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	50444	1	17895	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCTGGTCTCCC	NA	False	NA	13	True	AATAAA	-14	NA	57950333	57952856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_57950300_57952900
Isoform_12005_49	chr12	-	3474	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	38	1	38	-1	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTTTGGTTTTCA	NA	False	NA	-3	True	TATAAA	-18	NA	3359931	3297428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
Isoform_12010_7	chr12	-	3551	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-39	1	-39	-1	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTTTGGTTTTCA	NA	False	NA	-3	True	TATAAA	-18	NA	3360008	3297428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
Isoform_12022_4	chr12	-	3174	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-11	-1240	-4	-192	multi-exon	FALSE	canonical	3	62	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACTTTTTAAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	3476751	3454069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_3456712_3457643_3457925_3476500
Isoform_12024_28	chr12	-	2178	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	356	1814	0	1	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4283938	4263480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
Isoform_12025_6	chr12	-	2499	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	35	1814	35	1	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4284259	4263480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
Isoform_12026_26	chr12	-	2175	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4283965	4263480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
Isoform_12027_5	chr12	-	2463	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATTCTTTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	4284253	4263480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
Isoform_12029_3	chr12	-	484	3	FSM	ENSMUSG00000112819.2	ENSMUST00000217932.2	457	3	-27	0	-27	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	4603812	4602545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4602746_4603013_4603176_4603690
Isoform_1203_7	chr10	-	2238	6	ISM	ENSMUSG00000000731.16	ENSMUST00000131028.8	2966	14	5319	9	-31	-1	3prime_fragment	FALSE	canonical	2	9	junction_4	3.86781592116274	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGTACACCTGGTGG	NA	False	NA	-10	True	ATTAAA	-15	NA	77874125	77865865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77871668_77872518_77872619_77873706
Isoform_12030_4	chr12	-	320	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-23	2	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	4603808	4602543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_4602746_4603690
Isoform_12031_12	chr12	-	975	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	1	0	1	0	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	False	NA	0	True	AATAAA	-29	NA	4891590	4883173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
Isoform_12032_182	chr12	-	2170	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	205	321	-61	-4	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	4957500	4929352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_12034_9	chr12	-	2506	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	191	-1	-75	1	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTTGTACATGC	NA	False	NA	-5	True	GATAAA	-14	NA	4957514	4929030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_12035_47	chr12	-	2223	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	152	321	-114	-4	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	4957553	4929352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_12036_8	chr12	-	2323	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	52	321	52	-4	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	4957653	4929352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_1204_3	chr10	-	3065	6	NNC	ENSMUSG00000000731.16	novel	1712	13	NA	NA	-28	2	intron_retention	FALSE	canonical	1	2	junction_4	6.33719180710194	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTACACCTGGTGGATG	NA	False	NA	-7	True	ATTAAA	-18	NA	77874122	77865862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77871023_77871046_77872619_77873706
Isoform_1205_195	chr10	-	1351	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	27	0	-19	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4158	False	NA	-2	True	AATAAA	-29	NA	78005589	77997899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
Isoform_12051_7	chr12	-	2063	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-61	-1037	-61	-4	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	4957500	4929352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
Isoform_12053_8	chr12	-	2536	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	186	3025	-80	-1667	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTAAGAAAATATTCT	NA	False	NA	NA	False	NA	NA	NA	4957519	4932056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_12054_26	chr12	-	1058	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	188	4501	-78	-3143	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCAATGCAACATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	4957517	4933532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
Isoform_12058_60	chr12	-	2365	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	31	537	31	1	multi-exon	FALSE	canonical	3	56	junction_1	7	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4038	False	NA	-1	True	AATAAA	-19	NA	11200343	11140739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_11142757_11169759_11169950_11200185
Isoform_12060_3	chr12	-	2652	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	-256	537	213	1	multi-exon	FALSE	canonical	3	56	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	3751	False	NA	-1	True	AATAAA	-19	NA	11200630	11140739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_11142757_11169759_11169950_11200185
Isoform_12061_7	chr12	-	2376	3	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	689	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCCTTGTTTCTATG	4696	False	NA	-3	True	AATAAA	-17	NA	11199685	11140741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_11142757_11169759_11169950_11199514
Isoform_12062_4	chr12	-	2477	4	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7207222984806	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	4026	False	NA	-1	True	AATAAA	-19	NA	11200355	11140739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_11142757_11169759_11169950_11178388_11178489_11200185
Isoform_12063_12	chr12	-	3304	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-49	2013	-14	637	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTCTTGAAATGTCTT	NA	False	NA	NA	False	AATATA	-15	NA	11315816	11290933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
Isoform_12072_1505	chr12	-	2592	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	78	4	-11	-1	multi-exon	FALSE	canonical	3	794	junction_2	66.5	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCGATGTTTTCCTTC	NA	False	NA	-22	True	AATAAA	-16	NA	12991837	12986097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_12987612_12989610_12990488_12991636
Isoform_12073_46	chr12	-	2666	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	-2	10	-2	-7	multi-exon	FALSE	canonical	3	794	junction_2	66.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGCAAGGCGATGTTT	NA	False	NA	-28	True	AATAAA	-10	NA	12991917	12986103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_12987612_12989610_12990488_12991636
Isoform_12079_825	chr12	-	2485	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	29	2328	-21	-2328	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGCTTGTGTCTTCTTT	NA	False	NA	-5	True	AATAAA	-20	NA	13299185	13269301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
Isoform_12085_11	chr12	-	4165	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	6	1410	2	-39	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	7248	False	NA	84	True	TTTAAA	-33	NA	16639765	16587079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
Isoform_12087_3	chr12	-	4103	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	1	-1	1	1	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCTTTACTTTGA	7247	False	NA	-24	True	AATGAA	-14	NA	16639766	16587187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
Isoform_12088_7	chr12	-	4068	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	7	39	0	-39	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	7246	False	NA	84	True	TTTAAA	-33	NA	16639767	16587079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
Isoform_12089_3	chr12	-	4011	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	-44	147	-44	1	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCTTTACTTTGA	7195	False	NA	-24	True	AATGAA	-14	NA	16639818	16587187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
Isoform_1209_130	chr10	-	3868	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	4	0	4	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	-5	True	AATACA	-17	NA	78020979	78006742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
Isoform_12090_44	chr12	-	1873	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	52	3	1	-3	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTAAGCTGTCATGA	NA	False	NA	-2	True	AATAAA	-23	NA	17050067	17038651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
Isoform_12092_4	chr12	-	1902	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	22	4	20	-4	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTCTTAAGCTGTCATG	NA	False	NA	-3	True	AATAAA	-22	NA	17050097	17038652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
Isoform_12093_27	chr12	-	1430	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	-5	0	1	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTGTGTTCTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	17374731	17334720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
Isoform_12095_3	chr12	-	1067	2	FSM	ENSMUSG00000085642.9	ENSMUST00000143905.2	881	2	-209	23	0	-23	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	NA	False	NA	NA	False	TATAAA	-21	NA	20971263	20926450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_20927097_20970842
Isoform_12096_3	chr12	-	1097	6	FSM	ENSMUSG00000069755.6	ENSMUST00000208744.2	928	6	0	-169	0	169	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGAGTGTAATCA	NA	False	NA	NA	False	NA	NA	NA	20971263	20950574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_20950936_20952270_20952332_20952533_20952661_20964759_20964843_20965748_20965793_20970842
Isoform_12097_7	chr12	-	1135	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-55	621	33	-10	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTTCTGGACAAAAGA	NA	False	NA	-21	True	AATAAA	-4	NA	21336153	21320714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
Isoform_12098_14	chr12	-	1104	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-24	621	-24	-10	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTTCTGGACAAAAGA	NA	False	NA	-21	True	AATAAA	-4	NA	21336122	21320714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
Isoform_12100_72	chr12	-	986	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	40	895	-25	3	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAGAAGCCTTGGGGT	NA	False	NA	-8	True	AATAAA	-17	NA	21336245	21320701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
Isoform_12107_52	chr12	-	1640	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	123	347	123	-344	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467314	21440676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
Isoform_1211_159	chr10	-	3841	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	31	0	31	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	-5	True	AATACA	-17	NA	78020952	78006742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
Isoform_12110_1980	chr12	-	1487	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	605	56	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467533	21440676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12111_257	chr12	-	1859	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	74	264	25	-3	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTTATTATGGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	21467564	21440335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12113_429	chr12	-	1828	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	264	56	-3	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTTATTATGGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	21467533	21440335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12114_129	chr12	-	2090	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	105	2	56	-2	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTTGGCTGGTATTAGA	NA	False	NA	-14	True	AATAAA	-16	NA	21467533	21440073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12115_72	chr12	-	2119	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	77	1	28	-1	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGGCTGGTATTAGAA	NA	False	NA	-13	True	AATAAA	-17	NA	21467561	21440072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12117_1058	chr12	-	1515	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	77	605	28	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467561	21440676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12119_87	chr12	-	1561	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	31	605	-18	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467607	21440676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
Isoform_12129_12	chr12	-	1175	4	ISM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	38	5671	-3	7	5prime_fragment	FALSE	canonical	0	0	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGCTCATCCATCAGG	NA	False	NA	0	True	NA	NA	NA	23060247	23009670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_23010256_23042788_23042850_23043051_23043179_23059845
Isoform_12130_14	chr12	-	883	4	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8566	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.56846672960488	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCAGCTGAGCTCATCC	NA	False	NA	-6	True	NA	NA	NA	23051433	23009676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_23010256_23042788_23042850_23043051_23043179_23051317
Isoform_12131_3	chr12	-	1895	6	Fusion	ENSMUSG00000113174.2_ENSMUSG00000113798.2	novel	710	3	NA	NA	-299	572	multi-exon	FALSE	canonical	0	0	junction_2	5.89915248150105	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAATGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	23239698	23161963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_-_23162799_23163714_23163821_23165244_23165586_23200064_23200126_23200325_23200453_23239273
Isoform_12132_6	chr12	-	1268	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCGGGATTCTGAATGG	NA	False	NA	NA	False	AATAAA	-15	NA	25146089	25143799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_25144576_25145309_25145374_25145661
Isoform_12134_7	chr12	-	4835	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-60	37	-22	-37	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	8812	False	NA	NA	False	NA	NA	NA	26465275	26357069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
Isoform_12135_8	chr12	-	1334	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-57	3535	-19	-3140	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCCCCATTGAGCTT	8815	False	NA	NA	False	ACTAAA	-14	NA	26465272	26360567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
Isoform_12140_22	chrX	-	452	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	166	-36	166	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	151692950	151692498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151692500_151693000
Isoform_12144_7583	chr12	-	653	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	72	229	-3	0	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	7583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
Isoform_12145_537	chr12	-	703	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	21	230	21	0	multi-exon	FALSE	canonical	3	10789	junction_4	2567.89392736971	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685931	28681082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
Isoform_12153_109	chr12	-	2936	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	53	388	-18	-388	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8302	False	NA	-9	True	NA	NA	NA	28800399	28741015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_12154_47	chr12	-	3325	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	53	-1	-18	0	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8302	False	NA	-29	True	AATAAA	-20	NA	28800399	28740626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_12156_13	chr12	-	3001	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	-12	388	1	-388	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8237	False	NA	-9	True	NA	NA	NA	28800464	28741015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
Isoform_12157_44	chr12	-	3158	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	72	0	-18	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8302	False	NA	-29	True	AATAAA	-20	NA	28800399	28740626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_12158_17	chr12	-	2834	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	7	389	1	-388	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8237	False	NA	-9	True	NA	NA	NA	28800464	28741015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_12159_14	chr12	-	3193	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	35	2	-8	-1	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTGAGGAGACATGA	8265	False	NA	-31	True	AATAAA	-18	NA	28800436	28740628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_1216_9	chr10	-	4990	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	-7	64	-7	-64	multi-exon	FALSE	canonical	2	6	junction_11	3.08823413662964	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGAAGTCATAGAT	NA	False	NA	-4	True	AATAAA	-17	NA	78080482	78022622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
Isoform_12160_44	chr12	-	2769	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	72	389	-18	-388	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACAGTTCATTGTC	8302	False	NA	-9	True	NA	NA	NA	28800399	28741015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
Isoform_12162_3	chr12	-	1869	10	NNC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	24381	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.5923673901366	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGAGGAGACATG	NA	False	NA	-32	True	AATAAA	-17	NA	28775995	28740629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28775854
Isoform_12163_19	chr12	-	2337	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	-20	437	-20	-437	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGTGCTTCTTGGTTT	NA	False	NA	-8	True	ATTAAA	-14	NA	30961608	30944091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
Isoform_12164_177	chr12	-	1423	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	1313	0	907	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTGTCTGCCTGCTT	NA	False	NA	NA	False	AATACA	-12	NA	30961570	30944967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
Isoform_12170_19	chr12	-	2312	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-15	769	3	-439	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGGTGCTTCTTGGT	NA	False	NA	-10	True	ATTAAA	-12	NA	30961585	30944093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
Isoform_12173_193	chr12	-	1423	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	1643	0	907	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTGTCTGCCTGCTT	NA	False	NA	NA	False	AATACA	-12	NA	30961570	30944967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
Isoform_12178_281	chr12	-	2233	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	25	286	-14	-286	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGGTTATTCTGAGT	NA	False	NA	-11	True	AATAAA	-17	NA	31401427	31381561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
Isoform_1218_27	chr10	-	3601	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	80	1	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188196	78107395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
Isoform_12182_5	chr12	-	3831	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	69	0	8	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549546	31534934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
Isoform_12184_3	chr12	-	1863	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	1	2073	1	-1	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTATTTTTATGT	NA	False	NA	-21	True	ATTAAA	-15	NA	31549553	31536900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
Isoform_12185_3	chr12	-	1947	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	3	-1	3	1	multi-exon	FALSE	canonical	3	313	junction_3	46.7618077780005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTGGAGTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	31684595	31645358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
Isoform_12187_26	chr12	-	1782	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-20	4393	3	1	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTGGAGTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	31684654	31645358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
Isoform_12190_3	chr12	-	952	6	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-21	25820	2	17288	5prime_fragment	FALSE	canonical	3	313	junction_1	47.6931860961291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAGTCACATTTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	31684655	31666785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
Isoform_12192_67	chr12	-	1779	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	-7	1	-7	-1	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTATGACTCGCCTGT	9053	False	NA	-6	True	AATAAA	-16	NA	31704832	31690049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
Isoform_12194_8	chr12	-	2695	11	NIC	ENSMUSG00000002996.18	novel	3142	11	NA	NA	1	-223	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	68.426310729134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGGAAAAAAAAGGT	NA	False	NA	-29	True	NA	NA	NA	32000219	31976475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000103
Isoform_12195_232	chr12	-	2604	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	315	223	1	-223	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGGAAAAAAAAGGT	NA	False	NA	-29	True	NA	NA	NA	32000219	31976475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
Isoform_12196_4	chr12	-	2703	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	3	27	1	-27	multi-exon	FALSE	canonical	3	134	junction_8	33.3164280048147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGATGTGTTGGACT	NA	False	NA	NA	False	AATAAA	-15	NA	32000219	31979408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
Isoform_12197_4	chr12	-	965	3	FSM	ENSMUSG00000002996.18	ENSMUST00000175666.2	979	3	14	0	1	0	multi-exon	FALSE	canonical	3	134	junction_2	45	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTAGATTGTTTCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	32000219	31989749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31990506_31993827_31994012_32000194
Isoform_12198_5	chr12	-	5178	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-8	378	-8	-378	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTTGTCTGTATTGC	NA	False	NA	NA	False	AATAAA	-17	NA	35585045	35548350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
Isoform_12199_5	chr12	-	745	2	ISM	ENSMUSG00000019256.18	ENSMUST00000110811.3	1155	9	-414	21740	1	-12194	5prime_fragment	FALSE	canonical	3	52	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	ACTAAA	-36	NA	35585036	35576598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_35576868_35584560
Isoform_12200_188	chr12	-	1947	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-13	-2	-2	2	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTGTTTAAATCAAAG	NA	False	NA	-2	True	AATAAA	-22	NA	36092501	36064553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
Isoform_12209_538	chr12	-	1802	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	59	10	0	-10	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTATATGGT	NA	False	NA	-21	True	AATAAA	-11	NA	36206765	36141843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
Isoform_12216_4	chr12	-	3676	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	31	3	-22	-3	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTTGCGTTAGACTAT	NA	False	NA	-3	True	AATAAA	-13	NA	40087397	40083292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40086833_40087261
Isoform_12218_18	chr12	-	1125	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	53	2532	0	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCTAGTGTTTTGTGC	NA	False	NA	-8	True	AATAAA	-14	NA	40087375	40085821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40086833_40087261
Isoform_12219_10	chr12	-	3720	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	11	-2531	11	0	multi-exon	FALSE	canonical	3	220	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40088013	40083289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40086833_40087836
Isoform_12220_59	chr12	-	1157	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	44	-1	44	1	multi-exon	FALSE	canonical	3	220	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	False	NA	-6	True	AATAAA	-16	NA	40087980	40085819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40086833_40087836
Isoform_12222_12	chr12	-	1836	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	-20	1562	-20	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	-1	True	AATAAA	-23	NA	40273208	40253127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
Isoform_12223_310	chr12	-	1811	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	4	1563	0	1	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273184	40253128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
Isoform_12228_4	chr12	-	1935	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	-8	511	-8	-511	multi-exon	FALSE	canonical	2	4	junction_11	159.233493824495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTGAAGAAACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	40495781	40365555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
Isoform_12229_6	chr12	-	2078	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	109	1	-19	-1	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACCATTTTTACTTCTT	NA	False	NA	NA	False	NA	NA	NA	40495792	40365045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_12230_207	chr12	-	1564	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	122	502	-6	-502	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTTGTCATTATCT	NA	False	NA	NA	False	AATAAA	-26	NA	40495779	40365546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_12231_3	chr12	-	2170	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	121	-103	-7	103	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAAAATTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	40495780	40364941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_12233_5	chr12	-	1068	8	ISM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	130	7301	2	2128	5prime_fragment	FALSE	canonical	3	359	junction_2	44.603010788831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACTAAAGATACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	40495771	40372345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
Isoform_12236_9	chr12	-	1863	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	258	340	0	-340	multi-exon	FALSE	canonical	3	92	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCTTCAGTGTTGTCAT	NA	False	NA	NA	False	TATAAA	-11	NA	44256851	44252681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_44254189_44254869_44255097_44256722
Isoform_12237_7	chr12	-	2204	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	254	3	-4	-3	multi-exon	FALSE	canonical	3	92	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGACGTGCTTGGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	44256855	44252344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_44254189_44254869_44255097_44256722
Isoform_12238_3	chr12	-	3796	19	FSM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	-148	5	-148	-5	multi-exon	FALSE	canonical	0	0	junction_18	5.99897110519693	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTGGTGTCATACTA	NA	False	NA	-9	True	AATAAA	-9	NA	50696029	50388018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50466635_50466660_50472221_50472383_50474885_50475018_50536685_50536825_50695498
Isoform_12239_8	chr12	-	3041	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-10	15	0	-2	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	TTTAAA	-12	NA	51738680	51656429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_1224_3	chr10	-	3518	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	-44	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	150.89599066907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCTTTTTCTCTTTTT	NA	False	NA	-10	True	AATAAA	-8	NA	78187931	78107393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187866
Isoform_12240_5	chr12	-	2946	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-43	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	51738723	51656426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_12241_5	chr12	-	3055	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-152	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	51738832	51656426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_12242_17	chr12	-	2792	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	0	-1	0	1	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	51738680	51656426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
Isoform_12244_4	chr12	-	2078	10	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	-239	54254	-239	-17969	5prime_fragment	FALSE	canonical	3	70	junction_5	8.71496513383448	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGATACAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	51876558	51844758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_12245_21	chr12	-	1630	10	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	209	54254	-9	-17969	5prime_fragment	FALSE	canonical	3	70	junction_5	8.71496513383448	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGATACAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	51876110	51844758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
Isoform_12246_3	chr12	-	1964	3	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-46	-17573	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTTTTTTTTAAAGAAA	9953	False	NA	NA	False	NA	NA	NA	52018150	52006608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_52007474_52007493_52008428_52017985
Isoform_12247_4	chr12	-	2565	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	-1	0	1	multi-exon	FALSE	canonical	3	170	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTACAGCACTCTATGC	NA	False	NA	NA	False	AATAAA	-22	NA	52053284	52044288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_52046657_52051661_52051732_52053157
Isoform_1225_46	chr10	-	3503	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	93	2384	93	1	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188183	78107395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_12250_173	chr12	-	1165	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1399	0	-1399	multi-exon	FALSE	canonical	3	170	junction_1	5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACTCCAGTTTTTCTT	NA	False	NA	-3	True	AATAAA	-14	NA	52053284	52045688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_52046657_52051661_52051732_52053157
Isoform_12254_30	chr12	-	1375	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1399	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACTCCAGTTTTTCTT	NA	False	NA	-3	True	AATAAA	-14	NA	52053284	52045688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_52046657_52051661_52051732_52052947
Isoform_12255_5	chr12	-	1592	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	-6	-1400	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	83.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAAACTCCAGTTTTTCT	NA	False	NA	-4	True	AATAAA	-13	NA	52053290	52045689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_52046657_52051661_52051732_52052735
Isoform_12256_3	chr12	-	1240	4	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1398	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	77.1895214535122	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCCAGTTTTTCTTA	NA	False	NA	-2	True	AATAAA	-15	NA	52053284	52045687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_52046657_52051079_52051154_52051661_52051732_52053157
Isoform_12257_34	chr12	-	2031	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-11	642	-11	-642	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGAGTCGTCTTGATC	NA	False	NA	NA	False	NA	NA	NA	54250657	54226408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
Isoform_1226_8	chr10	-	3575	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	21	2384	21	1	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188255	78107395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
Isoform_12260_49	chr12	-	1323	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	11	12	11	-3	multi-exon	FALSE	canonical	3	293	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATGTAGCAGTCTC	NA	False	NA	NA	False	ATTAAA	-5	NA	54703347	54692188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54693321_54703156
Isoform_12261_51	chr12	-	1269	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	65	12	-12	-3	multi-exon	FALSE	canonical	3	293	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATGTAGCAGTCTC	NA	False	NA	NA	False	ATTAAA	-5	NA	54703293	54692188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54693321_54703156
Isoform_12264_22	chr12	-	2267	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	17	1902	-2	-587	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGCAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	54742649	54719026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
Isoform_12265_143	chr12	-	1039	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	20	3127	1	-1	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGAGTGGTTATCAA	NA	False	NA	-6	True	ATTAAA	-18	NA	54742646	54720251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
Isoform_12270_235	chr12	-	1909	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	24	-5	8	5	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGTCTTTTCTTTATC	NA	False	NA	-5	True	AATAAA	-25	NA	54842464	54793128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_12271_16	chr12	-	1940	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	-6	-6	-6	6	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTTTCTTTATCT	NA	False	NA	-4	True	AATAAA	-26	NA	54842494	54793127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_12272_49	chr12	-	2817	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	37	-926	-2	926	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGAAGGTGTGTAAT	NA	False	NA	-1	True	NA	NA	NA	54842451	54792207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_12278_24	chr12	-	1046	10	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	24	10501	8	25	5prime_fragment	FALSE	canonical	3	826	junction_9	114.99565209172	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCAGCTGTGGTGACA	NA	False	NA	-7	True	AATAAA	-17	NA	54842464	54803634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
Isoform_12284_5	chr12	-	2957	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-20	3	-20	-3	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTAAAGCTGTTGAG	NA	False	NA	-14	True	AATAAA	-9	NA	54909682	54905604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
Isoform_12285_30	chr12	-	1390	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	72	1478	-7	1	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGCCTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	54909590	54907079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
Isoform_12286_21	chr12	-	1486	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-23	1477	-23	2	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	54909685	54907078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
Isoform_12288_6	chr12	-	1232	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	9	1485	9	2	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	54909574	54907078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
Isoform_12290_4	chr12	-	1240	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-113	1	-34	-1	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTTGCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54909696	54907081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
Isoform_12291_12	chr12	-	1332	9	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	154	41206	-17	5602	5prime_fragment	TRUE	canonical	3	19	junction_8	7.69638713943107	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAGAAAGAGAAAAGGTA	NA	False	NA	NA	False	AAAAAG	-19	NA	55033138	54981541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
Isoform_12293_9	chr12	-	1423	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-340	22	-340	-7	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55127235	55092467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_12294_45	chr12	-	1088	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-5	22	-5	-7	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55126900	55092467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
Isoform_12296_29	chr12	-	1093	8	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-49	-6	multi-exon	FALSE	canonical	3	143	junction_4	24.4423520027957	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTGTTTGCTCTTTT	NA	False	NA	-5	True	AATAAA	-34	NA	55201730	55092451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
Isoform_12297_3	chr12	-	716	5	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-60	-7	multi-exon	FALSE	canonical	2	8	junction_3	88.6721489533213	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATCTGAAATG	NA	False	NA	-21	True	AATAAA	-18	NA	55201741	55092467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55109772_55109895_55201606
Isoform_12298_32	chr12	-	1493	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	332	2510	-4	-2510	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTGCTTACTAGAGT	NA	False	NA	NA	False	AATAAA	-29	NA	55349451	55328285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_12299_5	chr12	-	2261	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	332	1742	-4	-1742	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGTGTTTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	55349451	55327517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_12300_3	chr12	-	1809	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	13	2513	13	-2513	intron_retention	FALSE	canonical	3	216	junction_9	34.6025047262959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349770	55328288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
Isoform_12301_19	chr12	-	1701	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	2	2513	2	-2513	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349781	55328288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
Isoform_12306_32	chr12	-	1526	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	52	0	52	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55539380	55536194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
Isoform_1231_5	chr10	-	1944	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	37	3	-14	-3	multi-exon	FALSE	canonical	3	782	junction_1	71.0948115000119	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGCTGCTTCTCCCA	NA	False	NA	-22	True	AATAAA	-16	NA	78248840	78236222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
Isoform_12312_5	chr12	-	2477	15	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	0	17177	0	-17177	5prime_fragment	FALSE	canonical	3	70	junction_5	10.279760181432	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAAGCACAAAGGG	9947	False	NA	NA	False	NA	NA	NA	55867952	55786140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
Isoform_12315_56	chr12	-	1474	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	19	19	19	-19	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGTGTATAAACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56392660	56375106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_12316_3	chr12	-	1782	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	19	-19	intron_retention	FALSE	canonical	3	215	junction_1	41.3481978977047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGTGTATAAACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56392660	56375106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_12318_75	chr12	-	3620	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	83	406	83	-406	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2761	False	NA	-9	True	AATAAA	-18	NA	59058720	59005574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_12319_70	chr12	-	3706	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	-3	406	-3	-406	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2675	False	NA	-9	True	AATAAA	-18	NA	59058806	59005574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_12321_7	chr12	-	4108	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	1	0	1	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2679	False	NA	-27	True	NA	NA	NA	59058802	59005168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_12322_7	chr12	-	4026	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	83	0	83	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2761	False	NA	-27	True	NA	NA	NA	59058720	59005168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
Isoform_12325_162	chr12	-	1196	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	19	40	-6	-4	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTTGAAAGTTTATTT	NA	False	NA	-9	True	NA	NA	NA	59108228	59089917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
Isoform_12327_8	chr12	-	1018	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	-11	248	0	-7	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTTGTGTTCAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	59108258	59090125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
Isoform_12329_16	chr12	-	2710	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	242	736	242	-733	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59266269	59248176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
Isoform_12330_28	chr12	-	2010	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	23	4426	2	-47	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAAAGACCT	NA	False	NA	NA	False	ATTAAA	-8	NA	65012285	64990032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
Isoform_12336_1788	chr12	-	947	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	63	12	-15	0	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120718	65109209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
Isoform_12337_60	chr12	-	991	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	23	8	-18	4	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTATTTATTGTGTGT	NA	False	NA	-10	True	AATAAA	-21	NA	65120758	65109205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
Isoform_12349_5	chr12	-	4024	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-9	2	9	-2	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTGGGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	65219363	65179509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
Isoform_12350_4	chr12	-	3382	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATTTGTTTCTGGGT	NA	False	NA	-10	True	AATAAA	-13	NA	65219350	65179512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
Isoform_12353_3	chr12	-	1425	6	NIC	ENSMUSG00000047534.18	novel	2053	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	170.323926680898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAGAAATACAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	65219372	65195809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
Isoform_1236_44	chr10	-	5082	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	39	3	39	-3	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6841	False	NA	-5	True	AATAAA	-14	NA	78300770	78272580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_12361_1680	chr12	-	320	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	69	1	-63	-1	multi-exon	FALSE	canonical	3	25458	junction_2	210	1680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGTGTGTTTTG	NA	False	NA	-11	True	AATAAA	-17	NA	69205891	69204496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69204596_69205434_69205535_69205770
Isoform_12365_1572	chr12	-	490	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	39	-3	-31	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	1572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230818	69229511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69229940_69230756
Isoform_12369_118	chr12	-	2072	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1296	22	1296	-22	multi-exon	FALSE	canonical	3	240	junction_2	19	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTCATTGAGTT	NA	False	NA	-30	True	ATTAAA	-7	NA	69243907	69235882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69237169_69239581_69239726_69243265
Isoform_1237_7	chr10	-	5200	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-79	3	-79	-3	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6723	False	NA	-5	True	AATAAA	-14	NA	78300888	78272580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_12372_145	chr12	-	1691	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	12	3	-4	-3	multi-exon	TRUE	canonical	3	369	junction_1	34.9372011570955	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCTACACATTGTAG	NA	False	NA	-8	True	AATAAA	-17	NA	69274957	69248549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
Isoform_12373_19	chr12	-	2641	26	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	1	7505	1	4582	5prime_fragment	TRUE	canonical	3	272	junction_2	24.8128998708333	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAATCAACTTGTAAA	NA	False	NA	NA	False	AATGAA	-14	NA	69403938	69364800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
Isoform_1238_208	chr10	-	1213	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	52	3859	52	-3859	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGTGATTCACAACC	6854	False	NA	-1	True	TTTAAA	-20	NA	78300757	78276436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_12381_13	chr12	-	1088	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	61.6071424430642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629799	69624409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_12382_57	chr12	-	1026	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	93	-10	0	10	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTTGGCTCAGTACAT	NA	False	NA	5	True	AATAAA	-34	NA	69629791	69624391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_12383_22	chr12	-	1056	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	45	8	45	-8	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629839	69624409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_12384_3	chr12	-	1884	7	NNC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	-2	891	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.983463438165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTGACTCTGCTTCC	NA	False	NA	-9	True	AATAAA	-13	NA	69629793	69623510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_69623838_69623862_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_12385_5	chr12	-	1004	6	NIC	ENSMUSG00000049882.11	novel	1018	6	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	70.332353863638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAAGCAGCATGGTTG	NA	False	NA	-6	True	AATAAA	-23	NA	69629796	69624402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
Isoform_12387_22	chr12	-	1006	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	91	-222	-2	-1	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAAGCAGCATGGTTG	NA	False	NA	-6	True	AATAAA	-23	NA	69629793	69624402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
Isoform_12388_3	chr12	-	1883	6	NNC	ENSMUSG00000049882.11	novel	875	6	NA	NA	10	891	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.8377803244701	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTGACTCTGCTTCC	NA	False	NA	-9	True	AATAAA	-13	NA	69629779	69623510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629119_69629304_69629405_69629494
Isoform_12389_4	chr12	-	1972	5	ISM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	32	1070	32	-847	5prime_fragment	FALSE	canonical	3	142	junction_3	19.0656759649376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACATGTCTCGGTTTTT	NA	False	NA	NA	False	CATAAA	-13	NA	69629852	69625471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
Isoform_12392_91	chr12	-	3331	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	9	0	9	0	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771638	69737206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_12398_11	chr12	-	3082	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	44	-16	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTAATGTTTCTTG	NA	False	NA	-16	True	AATAAA	-18	NA	69771603	69737222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_12399_7	chr12	-	3126	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTAATGTTTCTTG	NA	False	NA	-16	True	AATAAA	-18	NA	69771647	69737222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
Isoform_12400_7	chr12	-	620	3	ISM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	1	30746	1	-8458	5prime_fragment	FALSE	canonical	3	564	junction_2	31.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGATTTGTGATTTCA	NA	False	NA	NA	False	AATATA	-17	NA	69771646	69767952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_69768238_69768851_69768968_69771427
Isoform_12401_4	chr12	-	3193	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-7	-1261	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCCTCTAGTTCCAAG	NA	False	NA	-7	True	AATAAA	-13	NA	69939944	69851795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
Isoform_12402_6	chr12	-	4423	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTATAAAGTATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	69939915	69850536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
Isoform_12405_7	chr12	-	4353	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	32	-2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTATAAAGTATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	69939845	69850536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
Isoform_12408_15	chr12	-	2785	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	37	3	-34	-3	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGCTTGGATTCCTT	6237	False	NA	-3	True	AATAAA	-25	NA	70274420	70237587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
Isoform_12409_70	chr12	-	872	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	-30	-124	9	1	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183438	71169945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
Isoform_1241_15	chr10	-	1308	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-41	3857	-41	-3857	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGATTCACAACCAT	6761	False	NA	1	True	TTTAAA	-22	NA	78300850	78276434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
Isoform_12411_28	chr12	-	787	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	8	-1	8	1	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183439	71169945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
Isoform_12412_3	chr12	-	1747	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	24	60	24	-60	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATAGAGGTGGGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	72132189	72120261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
Isoform_12413_14	chr12	-	1524	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	23	-3	-15	2	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTCTCTGTCTTTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	72283475	72258523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
Isoform_12415_26	chr12	-	1257	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	128	0	-1	0	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGACTGCAGACTTAGA	NA	False	NA	43	True	AATAAA	-16	NA	72711555	72697126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
Isoform_12417_3	chr12	-	6229	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	172	1	172	-1	multi-exon	FALSE	canonical	3	64	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGTGTTGAAGAAAGAT	NA	False	NA	-2	True	AATAAA	-17	NA	73160027	73146383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73151013_73155434_73156124_73159116
Isoform_12419_3	chr12	-	6224	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73160227	73146382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
Isoform_12420_4	chr12	-	2747	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-1	382	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGGTTTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	73160200	73149832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
Isoform_12423_4	chr12	-	1756	6	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	1	89	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	42.8205558114324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATAGACTGATTTTT	NA	False	NA	-6	True	AGTAAA	-22	NA	73333482	73327165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677_73332750_73333457
Isoform_12424_3	chr12	-	2144	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-81	3	-80	-3	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTTGTAATTCAAGGTA	NA	False	NA	-9	True	AATAAA	-18	NA	73333564	73326787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_12425_11	chr12	-	2088	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-15	-7	-14	7	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGTATTTCTATTTT	NA	False	NA	1	True	AATAAA	-28	NA	73333498	73326777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_12426_42	chr12	-	1678	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	388	0	82	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333483	73327172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_12427_3	chr12	-	1757	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-79	388	-78	82	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333562	73327172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
Isoform_12428_7	chr12	-	1040	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-13	82	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	38.0029238641216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333497	73327172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_73327407_73329385_73329511_73331408_73332050_73333457
Isoform_12429_4	chr12	-	3009	4	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-36	72	intron_retention	TRUE	non_canonical	0	0	junction_1	46.5689453033528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAGGAACTTGGATAT	NA	False	NA	-23	True	AGTAAA	-5	NA	73333520	73327182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_73327677_73327699_73329511_73331408_73332050_73333457
Isoform_12430_18	chr12	-	3292	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-90	1608	-45	10	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCATCGTGACCAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	75643064	75499262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_12431_63	chr12	-	3228	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-26	1608	2	10	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCATCGTGACCAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	75643000	75499262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_12434_8	chr12	-	4803	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-32	39	-4	-39	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAAAGAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	75643006	75497693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
Isoform_12437_73	chr12	-	2177	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	2	800	2	1	multi-exon	FALSE	canonical	3	148	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	6412	False	NA	NA	False	NA	NA	NA	75716309	75678169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75680283_75716245
Isoform_12438_3	chr12	-	2646	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	0	333	0	-333	multi-exon	FALSE	canonical	3	148	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATGTTT	6410	False	NA	-38	True	AATAAA	-20	NA	75716311	75677702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75680283_75716245
Isoform_12440_36	chr12	-	3301	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	3	19	3	-19	multi-exon	FALSE	canonical	3	57	junction_1	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTTTCTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	75782500	75761041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75763439_75769425_75769516_75781686
Isoform_12441_3	chr12	-	1070	2	FSM	ENSMUSG00000021054.7	ENSMUST00000220285.2	3200	2	5	2125	5	-2125	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	75782465	75769224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75769516_75781686
Isoform_12442_18	chr12	-	1704	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	13	-45	13	0	multi-exon	FALSE	canonical	3	78	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGTAGAAACTTTA	NA	False	NA	-12	True	ATTAAA	-19	NA	76416363	76395673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_12443_4	chr12	-	1766	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-56	-38	-56	-7	multi-exon	FALSE	canonical	3	78	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGAAGTTAATGTAGA	NA	False	NA	-19	True	ATTAAA	-12	NA	76416432	76395680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76397048_76402662_76402843_76416213
Isoform_12444_26	chr12	-	1016	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	-2	-4	-2	0	multi-exon	FALSE	canonical	3	177	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTCTGTCTTCCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	76842275	76839106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76839775_76841927
Isoform_12446_52	chr12	-	902	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	111	-3	109	-1	multi-exon	FALSE	canonical	3	177	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTCTGTCTTCCTT	NA	False	NA	-2	True	AATAAA	-19	NA	76842162	76839107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76839775_76841927
Isoform_12448_138	chr12	-	3121	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	30	7	30	-7	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATAGGTGTGTGGGTCT	NA	False	NA	-9	True	AATAAA	-11	NA	76869297	76844740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
Isoform_1245_21	chr10	-	3273	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	14	1	14	-1	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	0	True	AATAAA	-14	NA	78427784	78420337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
Isoform_12450_21	chr12	-	3345	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	-194	7	161	-7	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATAGGTGTGTGGGTCT	NA	False	NA	-9	True	AATAAA	-11	NA	76869521	76844740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
Isoform_12453_8	chr12	-	2039	6	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.3032186618072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008975	76984046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_12454_7	chr12	-	2064	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77009027	76984046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_12455_10	chr12	-	1997	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008961	76984047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_12456_15	chr12	-	1954	5	FSM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	-16	4	0	1	multi-exon	FALSE	canonical	3	16	junction_4	22.1697992773954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008975	76984046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_12458_72	chr12	-	1926	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	2	-2	2	2	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008973	76984045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
Isoform_1246_34	chr10	-	1640	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	3	11	-1	-6	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTCTGCCATGCATGT	NA	False	NA	-11	True	TATAAA	-11	NA	79369627	79362274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
Isoform_12460_8	chr12	-	2732	5	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	16	junction_4	22.1288838399048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTAGTAGTGTCTTCTTA	NA	False	NA	-2	True	AATAAA	-18	NA	77008992	76984044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
Isoform_12462_25	chr12	-	2685	4	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	20	junction_1	20.7257220756131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008973	76984045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
Isoform_12463_7	chr12	-	3138	3	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	56	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008976	76984047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_76986865_76999942_77000051_77008763
Isoform_12464_188	chr12	-	1319	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	85	2263	-58	14	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGTTGTTTCTTTTT	54	False	NA	-7	True	AGTAAA	-10	NA	78908327	78889761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_12468_4	chr12	-	2555	8	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-54	14	intron_retention	FALSE	canonical	3	904	junction_7	87.6938086847222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGTTGTTTCTTTTT	58	False	NA	-7	True	AGTAAA	-10	NA	78908323	78889761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_12470_3	chr12	-	762	8	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	22	4498	22	-2221	5prime_fragment	FALSE	canonical	3	904	junction_7	92.3484969989181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAATTGGCACTTACT	NA	False	NA	NA	False	NA	NA	NA	78908390	78891996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
Isoform_12473_10	chr12	-	1562	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	17	4	17	-4	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTATGGTTCTTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	78953721	78935468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
Isoform_12474_3	chr12	-	3582	3	NIC	ENSMUSG00000046157.14	novel	3860	3	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGCTGTGACCCATCT	NA	False	NA	-4	True	CATAAA	-23	NA	79054111	79008571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_79011948_79024534_79024716_79054086
Isoform_12475_3	chr12	-	3769	3	NNC	ENSMUSG00000046157.14	novel	3656	3	NA	NA	-1743	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACCCATCTGTT	NA	False	NA	-1	True	CATAAA	-26	NA	79056144	79008568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_79011948_79024534_79024716_79055935
Isoform_12476_5	chr12	-	3581	3	FSM	ENSMUSG00000046157.14	ENSMUST00000174721.8	537	3	8	-3052	8	0	multi-exon	FALSE	canonical	3	8	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79054106	79008570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_79011951_79024534_79024716_79054086
Isoform_12477_4	chr12	-	2308	4	NIC	ENSMUSG00000021120.12	novel	2339	4	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	42.4342628858646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTATGGACTTGT	NA	False	NA	-9	True	AATAAA	-22	NA	79136407	79127445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_79129271_79130389_79130474_79132420_79132626_79136213
Isoform_12478_54	chr12	-	2330	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	1	8	1	-8	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTATGGACTTGT	NA	False	NA	-9	True	AATAAA	-22	NA	79136424	79127445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
Isoform_12484_219	chr12	-	1028	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	219	243	0	69	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACATGTATAACATTA	NA	False	NA	-6	True	AATAAA	-21	NA	79219222	79203033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_12486_20	chr12	-	1237	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	10	243	10	69	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACATGTATAACATTA	NA	False	NA	-6	True	AATAAA	-21	NA	79219431	79203033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
Isoform_1249_21	chr10	-	2572	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	103	1	-5	0	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390930	79376079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
Isoform_12491_24	chr12	-	2820	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	438	4	-62	-4	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTTTATGGGGATAT	NA	False	NA	-22	True	AATAAA	-36	NA	79238629	79221114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
Isoform_12494_58	chr12	-	2987	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	1	2	1	-2	multi-exon	FALSE	canonical	3	257	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTGTCTATAGGTTT	9168	False	NA	90	True	AATAAA	-16	NA	80159786	80154529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80157323_80159592
Isoform_1250_3	chr10	-	2859	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	28	-3	intron_retention	FALSE	canonical	3	9	junction_12	74.8559168270863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGGTGTCTCATGGAT	NA	False	NA	-7	True	ATTAAA	-12	NA	79390883	79376082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390744
Isoform_12503_11	chr12	-	3736	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-296	-776	-16	1	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTTTGCTTGTTCCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	80307161	80214319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_1251_22	chr10	-	2749	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	9	junction_12	62.3803944318041	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390932	79376078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
Isoform_12516_9	chr12	-	3729	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	8	-3	8	3	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGCTTGTTCCTTTGG	NA	False	NA	-2	True	ATTAAA	-19	NA	80307137	80214317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_12519_10	chr12	-	3541	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	8	185	8	-185	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTCAAAGAAGATAAT	NA	False	NA	-17	True	ATTAAA	-20	NA	80307137	80214505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
Isoform_1252_8	chr10	-	2353	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	36	854	36	585	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCTGCTGTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	79473716	79455339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
Isoform_12528_3	chr12	-	3100	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	52	2554	52	-2554	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAAACGTGTCTGCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	80483323	80385175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
Isoform_1253_8	chr10	-	3933	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	36	-726	36	125	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAAGCCTACCTTA	NA	False	NA	NA	False	NA	NA	NA	79473716	79453759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
Isoform_12533_168	chr12	-	845	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-10	-329	6	-6	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690616	80680801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
Isoform_12536_2294	chr12	-	791	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	499	3	6	-3	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGGTTTTCTTATTTA	NA	False	NA	-4	True	AATAAA	-28	NA	80690616	80680798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
Isoform_12539_36	chr12	-	658	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	3	7	3	-7	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTATGATGTTCTCA	1001	False	NA	-53	True	AATAAA	-12	NA	81531881	81405806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
Isoform_12540_8	chr12	-	848	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	28	167	0	-167	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTTCTCAGTGTTC	NA	False	NA	-47	True	AATAAA	-18	NA	81579651	81405800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_12541_6	chr12	-	430	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	-2	3	-1	-1	multi-exon	FALSE	canonical	3	31	junction_1	143.25501736414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTATGCTTTTCAG	993	False	NA	-9	True	ATTAAA	-11	NA	81531889	81518869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
Isoform_12542_3	chr12	-	602	6	NIC	ENSMUSG00000021139.18	novel	2284	6	NA	NA	4	-1493	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	113.684827483706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTATGCTTTTCAG	NA	False	NA	-9	True	ATTAAA	-11	NA	81579647	81518869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_81518946_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_12543_35	chr12	-	604	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	13	1390	3	-1	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTATGCTTTTCAGTC	1001	False	NA	-7	True	ATTAAA	-13	NA	81531881	81518867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
Isoform_12544_29	chr12	-	796	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	5	1483	0	-1483	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCAGTCTACTTGCA	NA	False	NA	1	True	ATTAAA	-21	NA	81579651	81518859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
Isoform_12545_3	chr12	-	649	5	NIC	ENSMUSG00000021139.18	novel	2284	6	NA	NA	0	-1493	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	125.893556229062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTATGCTTTTCAG	NA	False	NA	-9	True	ATTAAA	-11	NA	81579651	81518869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81579489
Isoform_12546_23	chr12	-	3419	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	35	1201	4	0	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTTTTGTTTCCTT	NA	False	NA	-6	True	AATAGA	-12	NA	81579650	81545915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
Isoform_1255_6	chr10	-	3882	22	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	3	-3	combination_of_known_junctions	TRUE	canonical	1	2	junction_19	44.9978583516574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGAGACGCTGCGCT	4720	False	NA	-10	True	NA	NA	NA	79582402	79571966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
Isoform_12555_3	chr12	-	3271	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	22	12	3	-12	multi-exon	FALSE	canonical	3	34	junction_2	56.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTTGCTTCAGTTGT	NA	False	NA	-18	True	NA	NA	NA	81579651	81545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81548941_81551317_81551414_81579489
Isoform_12556_3	chr12	-	1108	9	NNC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	207.176517431392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATCATGCCTTTCCCT	NA	False	NA	-8	True	AATAAA	-16	NA	81641771	81620339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81640654_81640722_81641713
Isoform_12557_156	chr12	-	1030	8	FSM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	-26	-1	-21	1	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	81641758	81620337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
Isoform_12558_3	chr12	-	1165	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	4	-110	4	110	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAAACTCACTTGTTTG	NA	False	NA	NA	False	AATATA	-23	NA	81641776	81620220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
Isoform_1256_132	chr10	-	3741	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	11	3	3	-3	multi-exon	FALSE	canonical	3	126	junction_16	17.3118456555042	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGAGACGCTGCGCT	4720	False	NA	-10	True	NA	NA	NA	79582402	79571966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
Isoform_12561_4	chr12	-	612	7	NNC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.882056392996	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	81641758	81620337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_81620345_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
Isoform_12562_8	chr12	-	3981	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	7	576	7	453	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTCTCGTGTCCT	NA	False	NA	-3	True	NA	NA	NA	81827942	81768359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_12563_14	chr12	-	3921	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	70	573	70	456	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCGTGTCCTAAG	NA	False	NA	0	True	NA	NA	NA	81827879	81768356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
Isoform_12565_5	chr12	-	3003	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	4	1029	4	217	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTCTCCGACTGCTTC	NA	False	NA	1	True	AATAAA	-24	NA	83643992	83594651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_12566_12	chr12	-	2898	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	109	1029	1	217	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTCTCCGACTGCTTC	NA	False	NA	1	True	AATAAA	-24	NA	83643887	83594651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_12567_3	chr12	-	3263	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	6	767	6	479	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATCTCCATTTATC	NA	False	NA	NA	False	AATAAA	-11	NA	83643990	83594389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
Isoform_12568_7	chr12	-	2913	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-21	214	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	34.1123568895786	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCCCTCTCCGACTGC	NA	False	NA	-2	True	AATAAA	-21	NA	83643909	83594654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83643770
Isoform_12569_6	chr12	-	3695	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-16	-4	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGGTTTATAGTTCTG	NA	False	NA	-6	True	AATAAA	-45	NA	83968680	83840813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
Isoform_12571_7	chr12	-	3611	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATAGTTCTGTT	NA	False	NA	-4	True	NA	NA	NA	83968679	83840811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_12573_8	chr12	-	3429	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968645	83840812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_12575_4	chr12	-	510	4	ISM	ENSMUSG00000021224.16	ENSMUST00000136848.8	567	6	12	23650	-4	1	5prime_fragment	FALSE	canonical	3	81	junction_2	23.3666428910958	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACATCTC	NA	False	NA	NA	False	NA	NA	NA	83968645	83878600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_83878771_83888991_83889133_83923441_83923587_83968591
Isoform_12577_10	chr12	-	4201	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-37	2992	-37	189	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTACAAAGGCCAAGGAC	NA	False	NA	-26	True	AATAAA	-11	NA	84240826	84199043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
Isoform_12578_4	chr12	-	3808	13	FSM	ENSMUSG00000042507.16	ENSMUST00000220974.2	3565	13	-33	-210	-33	210	multi-exon	TRUE	canonical	3	40	junction_12	22.3288241716596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAAGGGCTGCAGGATC	NA	False	NA	-5	True	AATAAA	-32	NA	84265688	84199022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
Isoform_12579_3	chr12	-	2973	9	FSM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	18	9	6	-1	multi-exon	FALSE	canonical	1	2	junction_7	4.82020487116471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGTGATGTTTGAGATA	423	False	NA	NA	False	AATAAA	-20	NA	84408589	84392091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
Isoform_1258_3	chr10	-	3640	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-11	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	37.8295491942974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAATGAGACGCTGCG	4696	False	NA	-12	True	NA	NA	NA	79582426	79571968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
Isoform_12582_12	chr12	-	2158	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	14	2800	-1	2	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCCTCAGTATTTTAT	NA	False	NA	NA	False	AATAGA	-25	NA	84455789	84423448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
Isoform_12583_7	chr12	-	4973	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	-5	4	-5	-1	multi-exon	TRUE	canonical	3	43	junction_8	4.47014789713072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATAGTTTTCCTTTGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	84455808	84420652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
Isoform_12585_173	chr12	-	3402	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-10	7	-9	-7	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAAGTGGTCTTTTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	84497787	84477497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
Isoform_12587_8	chr12	-	2195	16	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1232	-5	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	54.7530212256213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTACAATAGACTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	84660929	84649311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678
Isoform_12590_5	chr12	-	2188	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	68.5911517161653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664154	84649305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84660819_84664056
Isoform_12591_8	chr12	-	2061	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-19	-15	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	68.5911517161653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84664163	84649441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84660819_84664056
Isoform_12592_4	chr12	-	1949	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1229	-17	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	60.9381168205308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	84660932	84649443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84660678
Isoform_12594_42	chr12	-	2207	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	3215	-122	1232	2	3prime_fragment	FALSE	canonical	3	177	junction_14	24.1887025971492	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84660929	84649304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
Isoform_12595_5	chr12	-	2558	19	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	57.1095168389669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84664110	84649304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895
Isoform_12596_4	chr12	-	2465	19	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-13	-18	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	57.1095168389669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84664157	84649444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895
Isoform_12597_121	chr12	-	2442	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-13	-120	-13	0	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84664157	84649306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
Isoform_126_92	ERCC-00131	+	752	1	FSM	ERCC-00131A	DQ855003	755	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	2	754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00131_+_0_800
Isoform_12600_6	chr12	-	2349	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-55	15	-12	-15	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84664199	84649441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
Isoform_12601_11	chr12	-	2195	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_16	51.6547659345195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84664155	84649304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84664056
Isoform_12602_12	chr12	-	2051	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-4	-15	combination_of_known_splicesites	FALSE	canonical	3	30	junction_16	51.6547659345195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84664148	84649441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84664056
Isoform_12603_5	chr12	-	2091	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1229	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.0086901244561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84660932	84649306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678
Isoform_12604_5	chr12	-	1953	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1232	-15	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.0086901244561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84660929	84649441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678
Isoform_12608_374	chr12	-	1165	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	205	1929	-33	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819721	84803264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_12610_536	chr12	-	1116	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	1929	16	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819672	84803264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_12612_24	chr12	-	3048	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	-3	16	3	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGATGCCTGATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84819672	84801332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_12613_115	chr12	-	1203	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	254	1842	16	88	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTGTGTGTTCAGT	NA	False	NA	-7	True	CATAAA	-14	NA	84819672	84803177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_12615_30	chr12	-	1318	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	139	1842	-99	88	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTGTGTGTTCAGT	NA	False	NA	-7	True	CATAAA	-14	NA	84819787	84803177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_12616_99	chr12	-	1230	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	140	1929	-98	1	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGGTTTTGTTTTTT	NA	False	NA	-26	True	ATTAAA	-18	NA	84819786	84803264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
Isoform_1262_552	chr10	-	1570	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	35	34	-7	-7	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602751	79594382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_12623_20	chr12	-	5413	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	32	1	-12	-1	multi-exon	FALSE	canonical	0	0	junction_19	22.9818668733885	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAAATGAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	85017642	84964924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
Isoform_12624_3	chr12	-	5356	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	21	0	intron_retention	TRUE	canonical	3	7	junction_19	21.533971100504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTAAATGAGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85017653	84964923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017471
Isoform_12625_3	chr12	-	2747	11	ISM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	32	11257	-12	4912	5prime_fragment	FALSE	canonical	0	0	junction_10	28.8757683880447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	85017642	84976180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
Isoform_12626_3	chr12	-	2716	4	ISM	ENSMUSG00000019235.10	ENSMUST00000222232.2	2034	5	-482	132	-482	-126	intron_retention	FALSE	canonical	3	141	junction_2	8.25967446224258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	609	False	NA	-19	True	AATAAA	-10	NA	85187245	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426
Isoform_12627_6	chr12	-	2501	5	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10806	384	-469	1	intron_retention	FALSE	canonical	3	138	junction_4	9.5655632348545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCAGTTCTTCTCAGGT	622	False	NA	-2	True	NA	NA	NA	85187232	85182406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
Isoform_12628_4	chr12	-	2079	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-213	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.2109624570144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	878	False	NA	-19	True	AATAAA	-10	NA	85186976	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851
Isoform_12629_11	chr12	-	2154	8	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-467	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6306921729616	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGCATCATTAATAT	624	False	NA	-1	True	AATAAA	-18	NA	85187230	85182021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85182098_85182119_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_1263_54	chr10	-	1653	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	-48	34	-48	-7	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602834	79594382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_12630_25	chr12	-	1792	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10797	427	-478	-36	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTCCTGTGTCA	613	False	NA	-45	True	AATAAA	-14	NA	85187241	85182449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_12631_44	chr12	-	1672	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-478	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.9989898897142	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	613	False	NA	-19	True	AATAAA	-10	NA	85187241	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183093_85183122_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_12632_9	chr12	-	1825	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-482	20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.9989898897142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTTCCACTCTGCAT	609	False	NA	17	True	NA	NA	NA	85187245	85182387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183083_85183115_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
Isoform_12633_8	chr12	-	2317	12	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	0	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5476529658468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	NA	False	NA	-19	True	AATAAA	-10	NA	85198024	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
Isoform_12634_7	chr12	-	2442	11	FSM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	15	424	1	-33	multi-exon	FALSE	canonical	1	2	junction_6	69.4942443659905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCTCCTGTGTCAGAA	NA	False	NA	-42	True	AATAAA	-17	NA	85198023	85182446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
Isoform_12635_3	chr12	-	2345	6	NNC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-476	-126	intron_retention	FALSE	canonical	0	0	junction_1	68.4064324460792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	615	False	NA	-19	True	AATAAA	-10	NA	85187239	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851
Isoform_12636_9	chr12	-	1811	7	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-481	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.744632351213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTCTTCTCAGGTGTT	610	False	NA	1	True	NA	NA	NA	85187244	85182403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_12637_3	chr12	-	2162	8	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-470	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.8759372468834	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCATCATTAATATAG	621	False	NA	1	True	AATAAA	-20	NA	85187233	85182019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85182098_85182119_85183095_85183127_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_12638_12	chr12	-	1701	6	NIC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-474	-126	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	48.0441463656084	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCCAGTGTGTTTA	617	False	NA	-19	True	AATAAA	-10	NA	85187237	85182539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186443_85187117
Isoform_12639_3	chr12	-	5587	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	-38	-850	-38	0	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAATGGGTTTGTT	NA	False	NA	NA	False	AATAAA	-5	NA	85317411	85281303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
Isoform_12640_5	chr12	-	5454	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	1	8	1	1	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAATGGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	85317372	85281301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
Isoform_12643_81	chr12	-	619	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	20	9	3	2	multi-exon	FALSE	canonical	3	386	junction_2	28.5	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTTACATTGCTTCCC	4311	False	NA	-9	True	AATAAA	-15	NA	85327189	85319180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85319602_85326764_85326857_85327083
Isoform_12645_9	chr12	-	5386	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7957	False	NA	-3	True	AATAAA	-15	NA	85386136	85346287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
Isoform_12646_4	chr12	-	5384	22	NNC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	23.2295066095744	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7957	False	NA	-3	True	AATAAA	-15	NA	85386136	85346287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368852_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
Isoform_12647_119	chr12	-	3503	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	-2169	-9	-5	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTTGAGGTGTATTTG	8612	False	NA	-6	True	AATAAA	-11	NA	85421473	85387392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
Isoform_1265_13	chr10	-	1469	9	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	338.39360864975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602773	79594382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602709
Isoform_12650_633	chr12	-	1328	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	6	-9	-6	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGAAGTCCTTGTGT	8612	False	NA	-11	True	ATTAAA	-14	NA	85421473	85389567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
Isoform_12651_18	chr12	-	1523	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-355	1	-327	-1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTCTGTGTACTTTGG	NA	False	NA	-5	True	AATAAA	-20	NA	85871651	85862222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_12652_237	chr12	-	1188	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-21	2	1	-2	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCGTCTGTGTACTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	85871317	85862223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_12653_12	chr12	-	1583	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-413	-1	-385	1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	-3	True	AATAAA	-22	NA	85871709	85862220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_12654_3	chr12	-	1280	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	397.913357403342	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGATCCGTCTGTGTA	NA	False	NA	-11	True	AATAAA	-14	NA	85871328	85862228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85870122_85870209_85871244
Isoform_12655_41	chr12	-	3820	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	30	0	30	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773204	86747275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
Isoform_12659_23	chr12	-	4625	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	436	3	8	-3	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTGTTCTTGTGCTTG	6085	False	NA	NA	False	AATAAA	-19	NA	87194240	87153637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_1266_19	chr10	-	1639	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	909	junction_5	92.3283846509019	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602755	79594382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_12661_5	chr12	-	4830	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	232	2	-196	-2	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTTCTTGTGCTTGA	5881	False	NA	NA	False	AATAAA	-20	NA	87194444	87153636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_12662_4	chr12	-	3162	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	-53	1955	13	-12	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGGTATCTTTTCA	5596	False	NA	1	True	CATAAA	-30	NA	87194729	87155589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_12663_4	chr12	-	5121	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	-59	2	7	-2	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTTCTTGTGCTTGA	5590	False	NA	NA	False	AATAAA	-20	NA	87194735	87153636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
Isoform_12665_4	chr12	-	617	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8439	62	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_2	15.7973274814304	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGTATTCTTGGGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	87271891	87267966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_87268219_87269818_87269953_87270931_87271084_87271812
Isoform_12666_87	chr12	-	2509	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	13	2	10	0	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCTTCCCCATCTGGT	NA	False	NA	-12	True	AATAAA	-19	NA	87313017	87285648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
Isoform_12668_8	chr12	-	3218	20	FSM	ENSMUSG00000021038.18_ENSMUSG00000072919.5	ENSMUST00000072744.15	2524	20	13	-707	10	702	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCCTCATACTTGAT	NA	False	NA	NA	False	TTTAAA	-32	NA	87313017	87284939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
Isoform_12670_153	chr12	-	2565	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-46	7	-46	-7	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7623	False	NA	-6	True	AATAAA	-14	NA	87346525	87325418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12671_4	chr12	-	2731	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-211	6	-211	-6	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7458	False	NA	-5	True	AATAAA	-15	NA	87346690	87325417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12672_43	chr12	-	2616	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-97	7	-97	-7	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7572	False	NA	-6	True	AATAAA	-14	NA	87346576	87325418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12673_3	chr12	-	3301	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-74	-701	-74	701	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGTTGGTTTATGAT	7595	False	NA	NA	False	NA	NA	NA	87346553	87324710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12674_3	chr12	-	2655	6	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-28	-9	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	30.7310917476096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATACAGTTTGATAAAG	7641	False	NA	-8	True	AATAAA	-12	NA	87346507	87325420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_87326977_87329073_87329268_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12675_5	chr12	-	2854	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	-2	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGATAAAGGATTTGG	7601	False	NA	-1	True	AATAAA	-19	NA	87346547	87325413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12676_3	chr12	-	2467	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-33	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.8834238750888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATACAGTTTGATAAAGG	7636	False	NA	-7	True	AATAAA	-13	NA	87346512	87325419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_87326977_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12677_7	chr12	-	2685	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-74	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGTTTGATAAAGGAT	7595	False	NA	-5	True	AATAAA	-15	NA	87346553	87325417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
Isoform_12678_6	chr12	-	999	2	ISM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-85	7718	-85	-3936	5prime_fragment	FALSE	canonical	3	97	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGCTTGGTTTGT	7584	False	NA	NA	False	AAGAAA	-41	NA	87346564	87333129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_87333912_87346347
Isoform_12679_5	chr12	-	957	2	ISM	ENSMUSG00000021036.11	ENSMUST00000170720.2	704	4	15344	-3	15344	3	3prime_fragment	FALSE	canonical	3	597	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTCTACTTGTGAAATC	8982	False	NA	-8	True	ATTAAA	-17	NA	87360043	87356409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_87356795_87359471
Isoform_12681_174	chr12	-	2029	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	101	4580	-13	1	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTATTCTACTTGTGAAA	8797	False	NA	-10	True	ATTAAA	-15	NA	87435028	87356411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_12686_15	chr12	-	2107	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	30	4573	30	8	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTTGTGAAATCACGCT	8726	False	NA	-3	True	ATTAAA	-22	NA	87435099	87356404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_12687_6	chr12	-	2059	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	-6	4657	-6	-76	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTCTGTTTGCTAAG	8690	False	NA	-3	True	AGTAAA	-20	NA	87435135	87356488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
Isoform_12689_7	chr12	-	2119	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87490630	87474853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_12690_3	chr12	-	4005	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTGTTTTGCCTTC	NA	False	NA	-4	True	ATTAAA	-13	NA	87490603	87472940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_12691_3	chr12	-	4063	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	1	-1910	1	-1	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGTGTTTTGCCTTCT	NA	False	NA	-3	True	ATTAAA	-14	NA	87490605	87472939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_12692_4	chr12	-	2152	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	-2	4	1	-4	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87490608	87474853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
Isoform_12693_32	chr12	-	1938	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	4	1915	1	-4	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGACCTGTATCTGT	NA	False	NA	-60	True	AATAAA	-15	NA	87490605	87474853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_12694_5	chr12	-	3852	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	3	2	0	-2	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTGTTTTGCCTTC	NA	False	NA	-4	True	ATTAAA	-13	NA	87490606	87472940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
Isoform_12696_228	chr12	-	2223	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	0	9	0	-9	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTCAATTCTGTTTA	NA	False	NA	-11	True	AATAAA	-11	NA	87519044	87496688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
Isoform_12699_12	chr12	-	2384	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4929	-9	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	244.437985988436	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTCAATTCTGTTTA	NA	False	NA	-11	True	AATAAA	-11	NA	87523973	87496688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
Isoform_1270_21	chr10	-	1490	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	357.615915273835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGAGCCCATGGCT	NA	False	NA	-14	True	AATACA	-9	NA	79602741	79594382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
Isoform_12705_9	chr12	-	1028	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	-2	830	-2	95	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTGTTAATGC	NA	False	NA	NA	False	AATAAA	-14	NA	88290798	88287721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_88288562_88290610
Isoform_12706_3	chr12	-	2487	16	ISM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	0	261682	0	29219	5prime_fragment	FALSE	canonical	3	46	junction_13	8.48685257717292	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGAAACCGCCACG	6152	False	NA	NA	False	NA	NA	NA	91351183	91226947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_12707_3	chr12	-	1275	11	ISM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	-17	300554	-17	-9653	5prime_fragment	FALSE	canonical	3	46	junction_8	7.98999374217527	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAGGACGTAATAAAAA	6135	False	NA	NA	False	AAGAAA	-21	NA	91351200	91265819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
Isoform_12708_4	chr12	-	1960	3	ISM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	137968	6277	65506	2257	3prime_fragment	FALSE	canonical	3	26	junction_2	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATTTCTCTGGGCCTG	NA	False	NA	-1	True	TATAAA	-18	NA	91615242	91606059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_91606580_91608494_91608698_91614005
Isoform_12709_3	chr12	-	3445	7	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	0	2254	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.1753697428268	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCATTTCTCTGGGC	143	False	NA	-4	True	TATAAA	-15	NA	91745911	91606062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91745772
Isoform_12711_3	chr12	-	1104	4	NIC	ENSMUSG00000020961.16	novel	1544	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAATTTTGTGGTAATTT	143	False	NA	NA	False	NA	NA	NA	91745911	91701826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_91702243_91707244_91707521_91710379_91710653_91745772
Isoform_12713_34	chr12	-	3980	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	27	2293	0	307	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTACATTTGTGTGTGC	NA	False	NA	-7	True	NA	NA	NA	91815904	91775109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12714_17	chr12	-	5731	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-7	576	-7	2	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	91815938	91773392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12720_10	chr12	-	3854	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	-27	1717	1	305	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGTACATTTGTGTGT	NA	False	NA	-9	True	NA	NA	NA	91815930	91775111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12721_5	chr12	-	5557	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	-11	-2	0	2	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	91815914	91773392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12722_6	chr12	-	2433	19	ISM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	17	7499	0	1962	5prime_fragment	FALSE	canonical	3	285	junction_15	40.6007738781685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTTTTCCTGATCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	91815914	91780315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12724_4	chr12	-	1488	4	FSM	ENSMUSG00000020964.15	ENSMUST00000172246.8	1484	4	-1	-3	0	3	multi-exon	FALSE	canonical	3	369	junction_2	17.2819751957543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91815914	91798945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_91799997_91808411_91808629_91809999_91810038_91815732
Isoform_12726_21	chr12	-	3723	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	107	2	-5	-2	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGAGAATTTGCATT	NA	False	NA	NA	False	NA	NA	NA	98225611	98168554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_12727_3	chr12	-	3798	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	32	2	32	-2	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGAGAATTTGCATT	NA	False	NA	NA	False	NA	NA	NA	98225686	98168554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_12728_10	chr12	-	2453	14	ISM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	110	9922	-2	-4763	5prime_fragment	FALSE	canonical	3	25	junction_5	5.73992557113158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAGAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	98225608	98178474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
Isoform_12737_8	chr12	-	3819	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	49	-986	49	986	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99359282	99160366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
Isoform_12739_32	chr12	-	2071	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-7	4	-7	-4	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATCATATTTATGGTA	NA	False	NA	-10	True	ATTAAA	-19	NA	99849708	99683794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
Isoform_12742_69	chr12	-	3703	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	15	0	15	0	multi-exon	TRUE	canonical	2	41	junction_5	13.3828469211889	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8571	False	NA	-5	True	GATAAA	-15	NA	100125892	100091710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
Isoform_12743_3	chr12	-	3918	15	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1533	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	22.0046377300935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	7018	False	NA	-5	True	GATAAA	-15	NA	100127445	100091710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798_100125990_100127327
Isoform_12744_28	chr12	-	3688	14	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_12	19.2473774437334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8571	False	NA	-5	True	GATAAA	-15	NA	100125892	100091710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
Isoform_12746_4	chr12	-	3347	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	93	6	-42	-6	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGACCCCTGGCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	100486992	100267034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
Isoform_12747_7	chr12	-	2141	15	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	9	5918	9	2	5prime_fragment	TRUE	canonical	3	13	junction_4	9.29450133692178	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAATTAAAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	100691370	100520615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_12748_3	chr12	-	2094	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	-8	22185	-8	-16265	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTGAGGTTATATTTG	NA	False	NA	NA	False	AATAAA	-32	NA	100691387	100536882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_12749_4	chr12	-	1226	8	NIC	ENSMUSG00000021180.10	novel	1039	8	NA	NA	15	17	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	9.9979589753844	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGACTGTTTCAAGATT	NA	False	NA	NA	False	NA	NA	NA	100691364	100560625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_100560824_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
Isoform_12750_5	chr12	-	2935	3	FSM	ENSMUSG00000047415.13	ENSMUST00000110065.8	2900	3	-32	-3	-15	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGTGTGCAGTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	100874472	100842940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_100845672_100854242_100854332_100874357
Isoform_12751_5	chr12	-	3142	17	ISM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	-18	29669	-18	-3146	5prime_fragment	FALSE	canonical	3	69	junction_5	6.07987201756748	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAAGATTGTGTTT	NA	False	NA	NA	False	AAAACA	-14	NA	100995333	100907450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
Isoform_12753_3	chr12	-	2598	2	ISM	ENSMUSG00000021182.17	ENSMUST00000223097.2	1253	7	-155	56688	-8	-56688	5prime_fragment	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100995323	100992290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_100994596_100995030
Isoform_12755_30	chr12	-	4504	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	-13	-408	-8	5	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTATGTTTCTTTTC	8764	False	NA	-19	True	AATAAA	-30	NA	101049969	101005765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_1276_59	chr10	-	2980	15	FSM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	0	217	0	10	multi-exon	FALSE	canonical	3	23	junction_14	45.000680266967	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTCACAGTAC	1814	False	NA	NA	False	NA	NA	NA	79744755	79730758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
Isoform_12760_83	chr12	-	4451	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-45	110	-6	-7	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATTGTATTAATTGT	8766	False	NA	-31	True	AATAAA	-18	NA	101049967	101005777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_12765_6	chr12	-	4515	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	3	-2	3	2	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGGTACCTTATTAAAA	8814	False	NA	81	True	AATAAA	-15	NA	101049919	101005665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
Isoform_1277_468	chr10	-	3002	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-23	-29	0	29	multi-exon	FALSE	canonical	3	153	junction_9	18.1911617921159	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAAGCCCCTTGTCCTGC	1814	False	NA	NA	False	AAAAAG	-11	NA	79744755	79730739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
Isoform_12775_4	chr12	-	2569	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	-115	3375	-115	-3	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTGTGTTTGGTTAAT	NA	False	NA	NA	False	ATTAAA	-10	NA	101785429	101716198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
Isoform_12778_3	chr12	-	1326	7	ISM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	110	59577	-2	-3874	5prime_fragment	TRUE	canonical	3	11	junction_6	3.97562014729219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAACAAGAGCGGCTG	7531	False	NA	NA	False	CATAAA	-38	NA	101879416	101859878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
Isoform_12782_8	chr12	-	2084	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	31	3248	28	932	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTGTGGGTTGACC	NA	False	NA	NA	False	AATAAA	-10	NA	101924474	101888407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_12784_6	chr12	-	5358	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	4	1	1	-1	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTCTATTTCTAATT	NA	False	NA	-6	True	AATAAA	-19	NA	101924501	101885160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_12785_5	chr12	-	1318	10	ISM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	57	7267	-41	-3087	5prime_fragment	FALSE	canonical	3	190	junction_1	41.7943229649526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTCCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	101924448	101892426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_12786_4	chr12	-	954	9	FSM	ENSMUSG00000021189.12	ENSMUST00000159883.2	879	9	-52	-23	43	0	multi-exon	FALSE	canonical	3	37	junction_7	92.3612980365694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTTTGTCTGTTTATA	NA	False	NA	-2	True	ATTAAA	-19	NA	101924459	101899184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
Isoform_12787_12	chr12	-	986	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	16	-2	16	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCTGTTTATAAA	NA	False	NA	0	True	ATTAAA	-21	NA	101924486	101899182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
Isoform_1279_31	chr10	-	3202	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-25	-227	0	0	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTGTCACCGTGGT	1812	False	NA	-1	True	AATAAA	-18	NA	79744757	79730541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
Isoform_12790_39	chr12	-	308	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	216	-13	216	5	multi-exon	FALSE	canonical	3	411	junction_2	787	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAAGTGTGATTCTTTT	NA	False	NA	-4	True	AATAAA	-25	NA	101941970	101934355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101934470_101935751_101935894_101941918
Isoform_12791_4	chr12	-	562	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	-47	-4	-47	-4	multi-exon	FALSE	canonical	3	411	junction_2	787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAGAATTTAAAGTGT	NA	False	NA	-13	True	AATAAA	-16	NA	101942233	101934364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101934470_101935751_101935894_101941918
Isoform_12792_119	chr12	-	296	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	555	10	228	2	multi-exon	FALSE	canonical	3	1653	junction_2	166	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTAAAGTGTGATTCT	NA	False	NA	-7	True	AATAAA	-22	NA	101941958	101934358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101934470_101935751_101935897_101941918
Isoform_12794_6	chr12	-	561	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	288	12	-39	0	multi-exon	FALSE	canonical	3	1653	junction_2	166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTTAAAGTGTGATT	NA	False	NA	-9	True	AATAAA	-20	NA	101942225	101934360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_101934470_101935751_101935897_101941918
Isoform_128_1177	ERCC-00136	+	1024	1	FSM	ERCC-00136A	EF011063	1025	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00136_+_0_1000
Isoform_1280_16	chr10	-	2990	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	210	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.5504900155906	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCACAGTACATAAAGCC	2127	False	NA	NA	False	NA	NA	NA	79744442	79730750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744339
Isoform_12800_26	chr12	-	1944	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	62	-16	62	2	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTGTGGTTTGTG	7551	False	NA	-1	True	AAAACA	-31	NA	102406010	102360340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
Isoform_12801_758	chr12	-	1859	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	147	-16	147	2	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTGTGGTTTGTG	7636	False	NA	-1	True	AAAACA	-31	NA	102405925	102360340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
Isoform_12803_472	chr12	-	2907	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	11	0	-5	0	multi-exon	TRUE	canonical	3	205	junction_5	27.4851250454756	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2418	False	NA	-1	True	AATAAA	-20	NA	102671178	102534840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
Isoform_12804_185	chr12	-	2954	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-36	0	-36	0	multi-exon	FALSE	canonical	3	205	junction_5	27.4851250454756	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2371	False	NA	-1	True	AATAAA	-20	NA	102671225	102534840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
Isoform_12808_16	chr12	-	2882	9	NIC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	82.2632967975391	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2418	False	NA	-1	True	AATAAA	-20	NA	102671178	102534840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102670980
Isoform_12809_4	chr12	-	1821	2	FSM	ENSMUSG00000096458.8	ENSMUST00000173760.9	1312	2	1	-510	1	510	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATACATTGTAATACTACA	NA	False	NA	-11	True	AATAAA	-28	NA	102709903	102707978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102709654_102709757
Isoform_12810_13	chr12	-	1763	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	16	-495	0	495	multi-exon	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGATCTTTGTATA	NA	False	NA	-26	True	AATAAA	-13	NA	102709904	102707993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102709654_102709801
Isoform_12811_66	chr12	-	1900	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	892	3	892	-3	multi-exon	FALSE	canonical	3	96	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGATCTTTGTATA	6382	False	NA	-26	True	AATAAA	-13	NA	102724039	102707993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102709654_102723799
Isoform_12815_5	chr12	-	1135	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	17	0	17	0	multi-exon	FALSE	canonical	3	237	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6379	False	NA	-1	True	AATAAA	-20	NA	102724042	102719533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102720426_102723799
Isoform_12817_4	chr12	-	4219	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-191	7	2	-7	multi-exon	TRUE	canonical	3	58	junction_1	8.02745289615579	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAACGCTCCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	102844728	102750903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
Isoform_12820_6	chr12	-	721	2	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	11633	-3	11633	-1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCCCTGTGATTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	103290210	103287401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_103287934_103290021
Isoform_12821_7	chr12	-	1173	3	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	10044	-2	10044	-2	3prime_fragment	FALSE	canonical	3	27	junction_2	7	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCCTGTGATTCC	NA	False	NA	-4	True	AATAAA	-13	NA	103291799	103287402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_103287934_103290021_103290176_103291311
Isoform_12831_831	chr12	-	2879	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-28	-1	-17	1	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	-11	True	ATTAAA	-21	NA	103392106	103374239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
Isoform_1284_84	chr10	-	1811	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	85	2	-2	-2	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9767	False	NA	-10	True	AATAAA	-13	NA	79752755	79745887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
Isoform_12844_23	chr12	-	1220	3	FSM	ENSMUSG00000021095.6	ENSMUST00000021513.6	1268	3	42	6	42	-6	multi-exon	FALSE	canonical	3	74	junction_1	3	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTTGTATTTCCTACC	NA	False	NA	-17	True	AATAAA	-20	NA	104439547	104437473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_104437906_104438251_104438512_104439019
Isoform_12845_5	chr12	-	6315	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTGGAACTAATTTT	4414	False	NA	-36	True	AATAAA	-19	NA	104718207	104657696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
Isoform_12846_3	chr12	-	4729	24	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-132	-3041	combination_of_known_junctions	FALSE	canonical	3	188	junction_14	26.7776675283877	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTGGGAAAAGGATGAAA	4278	False	NA	NA	False	NA	NA	NA	104718343	104666645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
Isoform_12849_3	chr12	-	3220	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	4	8642	4	-2	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGGGCGGAGTCTTTC	NA	False	NA	-26	True	AATAAA	-13	NA	104831331	104738017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
Isoform_1285_18	chr10	-	2110	12	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	64	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	38.8923073402432	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820100	79812953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743_79819987_79820035
Isoform_12850_9	chr12	-	499	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	27	1	27	-1	multi-exon	FALSE	canonical	3	45	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTGTCTCGTCTACT	8365	False	NA	NA	False	NA	NA	NA	104998509	104996876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_104997085_104998218
Isoform_12851_12	chr12	-	1419	4	NIC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	612.059002239345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188998	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_105183961_105184481_105184552_105184917_105185089_105188766
Isoform_12852_533	chr12	-	1395	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-3	6	-3	2	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188999	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
Isoform_12853_123	chr12	-	1422	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-30	6	26	2	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105189026	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
Isoform_12854_9	chr12	-	1346	4	FSM	ENSMUSG00000041359.15	ENSMUST00000176579.2	760	4	-34	-552	-3	2	multi-exon	FALSE	canonical	3	100	junction_2	769.488574747323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188999	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_105183961_105184481_105184552_105184966_105185089_105188791
Isoform_12855_11	chr12	-	1225	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	53	-743	-3	3	multi-exon	FALSE	canonical	3	551	junction_2	399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCGTGCTCTTGGAA	NA	False	NA	-7	True	AATAAA	-18	NA	105188999	105183013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_105183961_105184481_105184552_105188791
Isoform_12856_78	chr12	-	1233	5	NNC	ENSMUSG00000041359.15	novel	1299	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	843.075730584151	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188975	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_105183179_105183202_105183321_105183364_105183961_105184917_105185089_105188791
Isoform_12857_92	chr12	-	1299	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	917.824601980139	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTGCTCTTGGA	NA	False	NA	-8	True	AATAAA	-17	NA	105188999	105183014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_105183321_105183346_105183961_105184917_105185089_105188791
Isoform_1286_10	chr10	-	2090	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	132	3	132	-3	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGTGTAGTTCCTCAG	NA	False	NA	-20	True	AATAAA	-15	NA	79820032	79812954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
Isoform_12861_5	chr12	-	2357	2	NNC	ENSMUSG00000048251.16	novel	2522	2	NA	NA	22615	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	9594	False	NA	NA	False	NA	NA	NA	107947058	107881480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_107883674_107946894
Isoform_12862_19	chr12	-	2724	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-21	60	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145594	108072864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
Isoform_12864_9	chr12	-	2887	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-16	-7	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGTTTTTGTTTGTT	NA	False	NA	-7	True	ATTAAA	-12	NA	108145589	108072696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
Isoform_12866_294	chr12	-	2617	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-37	175	-37	60	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145610	108072864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_12867_176	chr12	-	2748	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	2	5	2	-5	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTTTTGTTTGTTCC	NA	False	NA	-5	True	ATTAAA	-14	NA	108145571	108072694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_1287_4	chr10	-	2221	11	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	77	-4	intron_retention	TRUE	non_canonical	0	0	junction_10	40.7155989763137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCGTGTAGTTCCTCA	NA	False	NA	-21	True	AATAAA	-14	NA	79820087	79812955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_79813688_79813796_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743_79819981_79820028
Isoform_12872_25	chr12	-	2614	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-28	-20	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAACCATGACTGGT	NA	False	NA	-20	True	AGTAAA	-12	NA	108145601	108072709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
Isoform_12873_34	chr12	-	2431	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	0	60	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145573	108072864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
Isoform_12875_13	chr12	-	2426	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-20	60	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTAGGACTCGAGT	NA	False	NA	-7	True	ATTAAA	-19	NA	108145593	108072864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_12876_8	chr12	-	2592	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-16	-5	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTTTTGTTTGTTCC	NA	False	NA	-5	True	ATTAAA	-14	NA	108145589	108072694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
Isoform_12877_35	chr12	-	1949	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	26	1	26	-1	multi-exon	FALSE	canonical	3	8	junction_1	5.09901951359278	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAAGCTCCTCTGTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	108801783	108791799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
Isoform_12878_240	chr12	-	1863	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860071	108825959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
Isoform_12888_2424	chr12	-	2790	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	37	4	0	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	2424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860063	108825959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
Isoform_1290_984	chr10	-	1017	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	131	0	-14	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5646	False	NA	-19	True	ATTAAA	-19	NA	79875498	79871782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
Isoform_1291_13	chr10	-	1159	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	-13	2	-13	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGTGCAATCCTAGA	5502	False	NA	-21	True	ATTAAA	-17	NA	79875642	79871784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
Isoform_12921_804	chr12	-	2765	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	86	430	-20	-7	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGTGGAATGTGT	NA	False	NA	-12	True	GATAAA	-14	NA	110662743	110657468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
Isoform_12981_13	chr12	-	1685	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	5	3	-4	-3	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7665	False	NA	-6	True	AATATA	-15	NA	110807368	110774234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_12983_8	chr12	-	1644	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_11	66.2311254884822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9507	False	NA	-3	True	AATATA	-18	NA	110805526	110774231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
Isoform_12985_4	chr12	-	1729	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	81.0791879013585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGGTTTGTTTCATTTT	7670	False	NA	-2	True	AATATA	-19	NA	110807363	110774230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794610_110800559_110800675_110807179
Isoform_12986_7	chr12	-	1509	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_8	78.5509192408354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7680	False	NA	-6	True	AATATA	-15	NA	110807353	110774234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
Isoform_12987_8	chr12	-	1491	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1824	-3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	78.692086288549	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9496	False	NA	-6	True	AATATA	-15	NA	110805537	110774234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
Isoform_12988_13	chr12	-	1395	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	74.9615526453395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7680	False	NA	-5	True	AATATA	-16	NA	110807353	110774233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
Isoform_12989_17	chr12	-	1507	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_12991_9	chr12	-	1458	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1844	-3	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9516	False	NA	-6	True	AATATA	-15	NA	110805517	110774234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
Isoform_12992_6	chr12	-	1347	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	83.5867812515831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7669	False	NA	-5	True	AATATA	-16	NA	110807364	110774233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
Isoform_12993_13	chr12	-	1302	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1842	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_7	83.7383387403882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9514	False	NA	-3	True	AATATA	-18	NA	110805519	110774231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
Isoform_12994_14	chr12	-	1234	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	79.9971938283348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7669	False	NA	-3	True	AATATA	-18	NA	110807364	110774231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
Isoform_12995_4	chr12	-	1579	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-3	intron_retention	FALSE	canonical	3	80	junction_9	70.9795658301183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7680	False	NA	-6	True	AATATA	-15	NA	110807353	110774234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
Isoform_12996_82	chr12	-	1451	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	20	558	-1	-6	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATATACATATTAATC	3369	False	NA	-16	True	NA	NA	NA	110855559	110839601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_12998_3	chr12	-	977	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	-9	-245	-1	239	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTATGTGTGTGGGTA	3369	False	NA	NA	False	NA	NA	NA	110855559	110841222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_12999_16	chr12	-	741	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	-17	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTGTAGGAGGTTAA	3361	False	NA	-18	True	AATAAA	-9	NA	110855567	110841466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
Isoform_1300_9	chr10	-	4351	29	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-1	-27	combination_of_known_junctions	FALSE	canonical	3	19	junction_28	32.0305179732182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGCCTTTTGCT	5693	False	NA	-23	True	AATGAA	-30	NA	79911235	79892852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
Isoform_13000_18	chr12	-	1607	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	-42	-2	3	0	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945471	110942860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
Isoform_13001_11	chr12	-	1511	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	-10	1076	-10	0	multi-exon	FALSE	canonical	3	78	junction_1	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGATCTGCCTGGT	NA	False	NA	-9	True	NA	NA	NA	110945484	110942862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110943983_110944381_110944562_110945273
Isoform_13002_34	chr12	-	1487	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	24	1066	5	7	multi-exon	FALSE	canonical	3	78	junction_1	17	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTCTGTTGCATG	NA	False	NA	1	True	NA	NA	NA	110945450	110942852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110943983_110944381_110944562_110945273
Isoform_13003_9	chr12	-	1610	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTCTGTTGCA	NA	False	NA	-1	True	NA	NA	NA	110945450	110942854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
Isoform_13004_3	chr12	-	1764	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	-59	1	-40	-1	multi-exon	FALSE	canonical	3	51	junction_1	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGGATCTGCCTGGTC	NA	False	NA	-8	True	NA	NA	NA	110945514	110942861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110944205_110944381_110944562_110945273
Isoform_13005_4	chr12	-	1699	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	12	-5	12	4	multi-exon	FALSE	canonical	3	51	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTGCCTGGTCTGTTGC	NA	False	NA	-2	True	NA	NA	NA	110945443	110942855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110944205_110944381_110944562_110945273
Isoform_13006_3	chr12	-	2146	8	ISM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	78343	0	3064	0	3prime_fragment	FALSE	canonical	3	140	junction_2	8.53563956930837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	7222	False	NA	-3	True	AATAAA	-25	NA	111265809	111259409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516
Isoform_13007_3	chr12	-	2727	10	ISM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	75491	3	212	-3	3prime_fragment	FALSE	canonical	3	113	junction_8	13.7014012079688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCAGGGGTTTGTCTGA	4370	False	NA	-6	True	AATAAA	-22	NA	111268661	111259412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447
Isoform_13008_3	chr12	-	6607	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	99	8	0	-8	multi-exon	TRUE	canonical	3	105	junction_28	14.8707393524629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTTCTCAGGGGTTTG	NA	False	NA	-11	True	AATAAA	-17	NA	111344053	111259417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
Isoform_1301_23	chr10	-	4631	32	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-3	-27	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGCCTTTTGCT	NA	False	NA	-23	True	AATGAA	-30	NA	79938535	79892852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_1303_14	chr10	-	2414	18	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1651	5426	-21	-2	internal_fragment	FALSE	canonical	3	133	junction_10	12.4322384803871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATGGGTCTCCATTCC	NA	False	NA	-2	True	AATAAA	-19	NA	79938553	79898251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_13031_6549	chr12	-	1434	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	38	0	-17	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	6549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
Isoform_13032_146	chr12	-	1469	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	3	0	3	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638769	111635794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
Isoform_13036_91	chr12	-	1508	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
Isoform_1304_4	chr10	-	2021	14	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1646	9259	-26	-2	internal_fragment	FALSE	canonical	3	133	junction_6	11.0630254697519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79938558	79902084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_1305_5	chr10	-	2674	4	FSM	ENSMUSG00000035673.11	ENSMUST00000217683.2	2601	4	-79	6	-24	-6	multi-exon	FALSE	canonical	3	148	junction_1	5.55777733351102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAATATTGTCTGCCAT	NA	False	NA	NA	False	AATAGA	-4	NA	79938556	79916249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79918561_79920074_79920149_79922090_79922267_79938443
Isoform_13052_3	chr12	-	2399	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	-140	-407	-114	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAAATCTGTCCCCCT	NA	False	NA	NA	False	CATAAA	-11	NA	111679501	111675930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111677847_111679018
Isoform_13053_60	chr12	-	2074	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	59	6	59	-6	multi-exon	FALSE	canonical	3	159	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCTGTCCCCCTGTG	NA	False	NA	NA	False	CATAAA	-14	NA	111679632	111675927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111677847_111679477
Isoform_13055_44	chr12	-	1759	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	30	350	30	66	multi-exon	FALSE	canonical	3	159	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTGGTTTGTGTTTA	NA	False	NA	-1	True	NA	NA	NA	111679661	111676271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111677847_111679477
Isoform_13059_9	chr12	-	2408	8	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	27.3488424558238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780285	111769630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776379_111777291_111777430_111778494_111778654_111780258
Isoform_1306_9	chr10	-	3187	11	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	10.5380263806844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9087	False	NA	-8	True	CATAAA	-11	NA	79975186	79966386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_13061_65	chr12	-	2396	9	NNC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.3857358544745	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780285	111769630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_111770505_111770536_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
Isoform_13062_57	chr12	-	2450	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-32	4	0	-4	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCAACACTTGCAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	111780307	111769630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
Isoform_13064_30	chr12	-	4402	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	-15	2	-15	-2	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGAGTCCTTTGAGTC	1098	False	NA	-2	True	AATAAA	-17	NA	111874559	111794892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
Isoform_13067_285	chr12	-	398	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-32	0	-32	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933443	111927808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
Isoform_13068_7	chr12	-	465	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-99	0	-99	0	multi-exon	FALSE	canonical	3	2424	junction_1	129.659382828839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933510	111927808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
Isoform_13069_13	chr12	-	2378	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTGTGGATGAGGAG	NA	False	NA	-10	True	AATAAA	-20	NA	112477604	112466622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
Isoform_1307_26	chr10	-	3163	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	12	0	10	0	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9086	False	NA	-6	True	CATAAA	-13	NA	79975187	79966384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_13070_30	chr12	-	2489	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	195	6	125	-6	multi-exon	FALSE	canonical	3	224	junction_13	42.5045768506691	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112640515	112620260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
Isoform_13071_6	chr12	-	2475	14	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	94	-7	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	96.6788130843996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112641224	112620261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112641155
Isoform_13072_18	chr12	-	2579	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-475	-6	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_13	94.3623257487333	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112638473	112620260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112638301
Isoform_13073_13	chr12	-	1346	7	NNC	ENSMUSG00000118667.1	novel	11349	7	NA	NA	6870	-9992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.577350269189626	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAGAAGAAAAAGCAGG	NA	False	NA	NA	False	AATAGA	-19	NA	112759407	112748619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_112749216_112749335_112749512_112749782_112749925_112750608_112750711_112751520_112751620_112751742_112751799_112759232
Isoform_13075_21	chr12	-	2340	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	78	7	63	1	multi-exon	FALSE	canonical	3	30	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9724	False	NA	-7	True	ATTAAA	-12	NA	112792931	112783855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112785733_112792468
Isoform_13076_24	chr12	-	2118	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	300	7	285	1	multi-exon	FALSE	canonical	3	30	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9946	False	NA	-7	True	ATTAAA	-12	NA	112792709	112783855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112785733_112792468
Isoform_13078_343	chr12	-	1968	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	27	-1	-7	1	multi-exon	FALSE	canonical	3	463	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9639	False	NA	-7	True	ATTAAA	-12	NA	112793016	112783855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112785733_112792925
Isoform_1308_8	chr10	-	3357	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	16	junction_9	8.743251365736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9087	False	NA	-6	True	CATAAA	-13	NA	79975186	79966384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_13080_61	chr12	-	2064	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	-69	-1	-69	1	multi-exon	FALSE	canonical	3	463	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATGTGTTAGGAGCC	9543	False	NA	-7	True	ATTAAA	-12	NA	112793112	112783855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112785733_112792925
Isoform_13082_13	chr12	-	771	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	-13	-24	-6	-2	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCCGCTGGCTTTGA	8841	False	NA	-8	True	AATAAA	-17	NA	112905750	112898350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
Isoform_13083_66	chr12	-	801	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	2	438	2	0	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	8849	False	NA	-6	True	AATAAA	-19	NA	112905742	112898348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
Isoform_13084_3	chr12	-	559	4	FSM	ENSMUSG00000002804.5	ENSMUST00000221497.2	355	4	-12	-192	2	-4	multi-exon	FALSE	canonical	2	11	junction_1	100.422441051125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATGTCCGCTGGCTTT	8849	False	NA	-10	True	AATAAA	-15	NA	112905742	112898352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_112898671_112902414_112902480_112902898_112902943_112905610
Isoform_13085_3	chr12	-	679	4	ISM	ENSMUSG00000042050.9	ENSMUST00000223039.2	3256	8	0	14596	0	52	5prime_fragment	FALSE	canonical	3	15	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGATACCGAGAAAG	NA	False	NA	NA	False	AATAGA	-11	NA	116226606	116218048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_116218117_116219450_116219872_116221040_116221095_116226470
Isoform_13086_7	chr12	-	2466	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	35	440	35	-440	multi-exon	FALSE	canonical	2	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTCAGTGTCTCG	NA	False	NA	1	True	NA	NA	NA	116368795	116366006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_116368264_116368586
Isoform_13087_5	chr12	-	2429	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	33	-440	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTCAGTGTCTCG	NA	False	NA	1	True	NA	NA	NA	116368797	116366006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_116368264_116368625
Isoform_13088_25	chr12	-	1481	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	19	-9	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	75.0598719356755	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTTTTCATGTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	56392660	56375096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
Isoform_1309_5	chr10	-	3941	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	10	-2	intron_retention	FALSE	canonical	2	8	junction_5	10.4774890970011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9086	False	NA	-8	True	CATAAA	-11	NA	79975187	79966386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_13090_5	chr12	-	2330	2	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-8	-38291	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTAAACGTCTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	22206655	22204047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_22205955_22206232
Isoform_13091_3	chr12	-	607	2	Antisense	novelGene_ENSMUSG00000034574.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGCTTGCCGCCAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	72036562	72028561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_-_72028865_72036258
Isoform_13092_4	chr12	-	562	2	NNC	ENSMUSG00000113572.2	novel	1078	2	NA	NA	762	63	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACAAAAGACTTTGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	71316369	71315454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_71315914_71316266
Isoform_13093_3	chr12	-	733	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTTCTCCAGGTCA	NA	False	NA	-23	True	ATTAAA	-14	NA	86516793	86471843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_-_86472015_86508048_86508306_86516488
Isoform_13094_3	chr12	-	2229	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	0	1970	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	321.746857016506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACACGTCCACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	85871318	85860251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_-_85860502_85861433_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
Isoform_13095_7	chr12	+	939	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	7	3060	7	77	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCTCTGCATGCGTTT	NA	False	NA	87	True	CATAAA	-17	NA	3285510	3288350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_13096_4	chr12	+	1076	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	15	2915	-7	222	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCTCTGGGTGGATTT	NA	False	NA	NA	False	CATAAA	-27	NA	3285518	3288495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_13097_21	chr12	+	855	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	15	3136	-7	1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285518	3288274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
Isoform_13098_7	chr12	+	839	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-26	-1	-4	1	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285499	3288274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
Isoform_13099_14	chr12	+	2226	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-23	12103	-1	1	5prime_fragment	FALSE	canonical	3	138	junction_2	36.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285502	3288274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_3287413_3287590_3287661_3288028
Isoform_1310_5	chr10	-	3916	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	10	junction_5	10.0492613818622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9086	False	NA	-6	True	CATAAA	-13	NA	79975187	79966384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
Isoform_13100_18	chr12	+	4367	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-14	2438	-14	-8	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAATTTTCATTGA	NA	False	NA	-4	True	AGTAAA	-11	NA	3415175	3454056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
Isoform_13104_3	chr12	+	1377	2	ISM	ENSMUSG00000037486.19	ENSMUST00000140046.3	2895	4	-5	10625	-5	-10625	5prime_fragment	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3476906	3493544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_3477213_3492473
Isoform_13105_3	chr12	+	4637	12	NIC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	16.9910039396156	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATACAGAATGCAGGTCT	NA	False	NA	31	True	AATAAA	-30	NA	3476883	3552483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3477213_3492473_3492557_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
Isoform_13108_17	chr12	+	2368	20	FSM	ENSMUSG00000071454.14	ENSMUST00000173199.8	2820	20	53	399	0	0	multi-exon	FALSE	canonical	0	0	junction_4	121.930910004004	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622433	3831397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_13109_228	chr12	+	2378	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	12	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622444	3831398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
Isoform_13110_111	chr12	+	2412	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	-22	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622410	3831398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
Isoform_13113_112	chr12	+	2371	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622410	3831398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_13114_406	chr12	+	2345	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622436	3831398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_13118_10	chr12	+	2306	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	113.901516915077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGCCTGTGTGTGTTC	NA	False	NA	21	True	AAAAAG	-1	NA	3622420	3831392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
Isoform_1312_9	chr10	-	994	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	-9	3	-9	-3	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGGTTGGTTGGCAGT	9240	False	NA	NA	False	AATAAA	-15	NA	80096855	80093987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
Isoform_13120_23	chr12	+	2264	18	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.136872618653	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTGTGTTCCTTC	NA	False	NA	25	True	AAAAAG	-5	NA	3622425	3831396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
Isoform_13128_6	chr12	+	4272	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-35	5448	-35	448	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGCTTTCTGTCTAA	591	False	NA	7	True	AATAAA	-16	NA	3856994	3958995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_13133_6	chr12	+	2986	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	55	-713	39	8	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCGACTTCATAATGGT	NA	False	NA	3	True	NA	NA	NA	3941782	3958555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_13136_3	chr12	+	2701	12	NIC	ENSMUSG00000020661.16	novel	2328	18	NA	NA	4	450	intron_retention	FALSE	canonical	3	107	junction_1	13.5865757761959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	9	True	AATAAA	-18	NA	3947423	3958997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
Isoform_13137_3	chr12	+	946	4	ISM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	18	12426	18	406	5prime_fragment	FALSE	canonical	3	31	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	4132646	4146778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212
Isoform_13138_12	chr12	+	4650	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	46	2	0	-2	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGGTCTGCTGGCTGC	NA	False	NA	6	True	AGTAAA	-12	NA	4132628	4160604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
Isoform_1314_69	chr10	-	1180	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	13	456	13	-456	multi-exon	FALSE	canonical	3	349	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTTCTCCCTTAAGC	8730	False	NA	-18	True	ATTAAA	-16	NA	80156358	80154543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80155382_80156016
Isoform_13140_6	chr12	+	1107	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	0	3591	0	-2189	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTCACTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	4132582	4157015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
Isoform_13141_5	chr12	+	4388	9	FSM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-57	-1397	-11	-5	multi-exon	FALSE	canonical	2	4	junction_7	12.4492720670728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACACTGGTCTGCTGGC	NA	False	NA	3	True	AGTAAA	-9	NA	4132571	4160601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158_4157349_4157549
Isoform_13142_6	chr12	+	2980	9	FSM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-48	2	-2	-2	multi-exon	FALSE	canonical	2	4	junction_7	12.4492720670728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAAGAAGGGATAA	NA	False	NA	NA	False	TATAAA	-16	NA	4132580	4159202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158_4157349_4157549
Isoform_13143_3	chr12	+	4961	22	NIC	ENSMUSG00000020654.16	novel	4962	22	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGAGACTGTTGTGGCA	NA	False	NA	4	True	ATTAAA	-14	NA	4183103	4263521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13144_4	chr12	+	4728	22	NIC	ENSMUSG00000020654.16	novel	4672	22	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183402	4263522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13145_3	chr12	+	5032	22	NIC	ENSMUSG00000020654.16	novel	4672	22	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.8737696951146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183098	4263522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13146_3	chr12	+	5026	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183098	4263522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13147_3	chr12	+	4737	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183387	4263522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13148_3	chr12	+	5014	22	FSM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	-290	4	3	-3	multi-exon	FALSE	canonical	3	14	junction_1	15.9929122623238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGAGACTGTTGTGGCA	NA	False	NA	4	True	ATTAAA	-14	NA	4183106	4263521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_13149_3	chr12	+	4719	22	FSM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	6	3	1	-2	multi-exon	FALSE	canonical	3	14	junction_1	15.9929122623238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183402	4263522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
Isoform_1315_22	chr10	-	1649	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	1	-1	1	1	multi-exon	FALSE	canonical	3	349	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGCTCGCTTTATTAA	8718	False	NA	NA	False	GATAAA	-20	NA	80156370	80154086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80155382_80156016
Isoform_13150_37	chr12	+	567	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	21	3252	21	-3252	multi-exon	FALSE	canonical	3	212	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTATCATCATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	4284047	4286698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4284279_4286362
Isoform_13156_446	chr12	+	762	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	17	401	0	-8	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGTCTTCTGTTAAA	NA	False	NA	27	True	AATAAA	-17	NA	4867560	4877258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
Isoform_13159_23	chr12	+	560	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	48	-3	-18	3	multi-exon	FALSE	canonical	3	75	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGTGGTGTGTGCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	4893375	4899346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4893452_4898862
Isoform_1316_3	chr10	-	1256	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	-65	458	-65	-458	multi-exon	FALSE	canonical	3	349	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACAGTTCTCCCTTAA	8652	False	NA	-20	True	ATTAAA	-14	NA	80156436	80154545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80155382_80156016
Isoform_13160_4	chr12	+	2120	4	FSM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	81	1	-10	-1	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGATTTATTCAT	NA	False	NA	NA	False	NA	NA	NA	4893383	4906966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4906845
Isoform_13164_17	chr12	+	1157	7	ISM	ENSMUSG00000052812.6	ENSMUST00000218303.2	1824	10	5	10010	5	-2092	5prime_fragment	FALSE	canonical	3	154	junction_4	4.87909372276815	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAACAGTGGATCGAT	NA	False	NA	NA	False	AAGAAA	-26	NA	4967411	4994984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905
Isoform_13166_5	chr12	+	1216	7	ISM	ENSMUSG00000052812.6	ENSMUST00000218303.2	1824	10	-54	10010	0	-2092	5prime_fragment	FALSE	canonical	3	154	junction_4	4.87909372276815	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAACAGTGGATCGAT	NA	False	NA	NA	False	AAGAAA	-26	NA	4967352	4994984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905
Isoform_13168_17	chr12	+	2709	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	28	0	1	0	multi-exon	FALSE	canonical	3	35	junction_1	76.8839312788367	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258134	8335759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_1317_5	chr10	-	3072	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	185	9	185	-9	multi-exon	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTAAGCGCTGGCGTT	NA	False	NA	-9	True	AATAAA	-11	NA	80223308	80216197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80218456_80222494
Isoform_13170_71	chr12	+	2730	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	3	188	junction_5	23.7533623350932	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258125	8335759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_13172_8	chr12	+	2583	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	91.7243697171041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258128	8335759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_8258205_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
Isoform_13176_416	chr12	+	2949	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	7	3	7	-3	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	8363438	8393821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
Isoform_13179_14	chr12	+	2984	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.6881675692481	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	8363449	8393821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
Isoform_1318_28	chr10	-	1255	5	ISM	ENSMUSG00000035478.15	ENSMUST00000105347.2	914	6	333	-440	-60	-3	3prime_fragment	FALSE	canonical	3	1097	junction_1	94.3328548279972	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80231220	80228375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897
Isoform_13181_5	chr12	+	3624	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	134	2553	-63	7	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8724357	8800008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_13182_4	chr12	+	3397	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-128	26	67	1	multi-exon	TRUE	canonical	3	62	junction_12	35.415538790362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCACCAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	8724341	8800002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_13183_3	chr12	+	3367	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	42.809311126361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACCAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	8724725	8800003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
Isoform_13184_716	chr12	+	2452	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	61	644	-29	9	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTACTGCTTCTGCTT	NA	False	NA	14	True	AATAAA	-23	NA	8821383	8843071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
Isoform_13185_51	chr12	+	3097	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	61	-1	-29	1	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTACTTGTGCAGT	NA	False	NA	NA	False	AATAAA	-29	NA	8821383	8843716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
Isoform_1319_35	chr10	-	1579	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	80	3	-48	-3	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235304	80228375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_13190_440	chr12	+	1347	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	411	15	411	-15	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCCTTAAATGTGC	NA	False	NA	23	True	AATAAA	-14	NA	8972074	8988727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
Isoform_13192_24	chr12	+	1468	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	300	5	300	-5	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGCCTCATGTTTA	NA	False	NA	33	True	AATAAA	-24	NA	8971963	8988737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
Isoform_13196_3	chr12	+	1998	3	NNC	ENSMUSG00000020583.5	novel	3014	8	NA	NA	0	-18322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	8997928	9003706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_8998252_9001997_9002604_9002637
Isoform_13197_24	chr12	+	3834	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-34	512	2	-512	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCAGTGGTAGCATGC	NA	False	NA	6	True	AATAAA	-20	NA	9024012	9078334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
Isoform_13198_20	chr12	+	4326	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-13	-1	-13	0	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTAATGCTGTAGTT	NA	False	NA	8	True	AATAAA	-15	NA	9024033	9078847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
Isoform_1320_86	chr10	-	1550	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	111	1	-17	-1	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_13200_36	chr12	+	788	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	1	211	1	-211	multi-exon	FALSE	canonical	3	121	junction_2	13	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTATTCCCAACTTTG	NA	False	NA	17	True	AGTAAA	-19	NA	9079997	9086183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_9080197_9084921_9085089_9085761
Isoform_13202_7	chr12	+	1410	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	68	2	68	-2	multi-exon	FALSE	canonical	3	67	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGCATTTCTTT	NA	False	NA	9	True	AATAAA	-15	NA	10440839	10445560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_10441227_10444537
Isoform_13204_4	chr12	+	720	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	760	0	-760	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTGGCTAACATTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	10440771	10444802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_10441227_10444537
Isoform_13211_31	chr12	+	2506	20	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	199	20471	-20	-106	5prime_fragment	TRUE	canonical	3	574	junction_19	48.6857183265798	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAACAAAAAGAAAACATGG	4516	False	NA	NA	False	AATAAA	-33	NA	11316085	11349315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259
Isoform_13215_4	chr12	+	1406	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	36	8010	-2	-384	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGATTCAACCCAGCCGA	NA	False	NA	-28	True	AATATA	-21	NA	12312175	12422956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_13216_28	chr12	+	1386	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-14	399	-6	-343	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTTGATGTCTGAAGC	NA	False	NA	13	True	CATAAA	-15	NA	12312163	12422997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_13218_8	chr12	+	1471	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	11	289	-1	-233	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTTGTGGTATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	12312188	12423107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
Isoform_13219_5	chr12	+	2584	9	ISM	ENSMUSG00000057469.9	ENSMUST00000220794.2	2694	10	-13	13001	-13	-11	5prime_fragment	FALSE	canonical	0	0	junction_1	108.357048686276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTGCTGCGT	7383	False	NA	-7	True	ATTAAA	-4	NA	16860950	16876742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_16861317_16862289_16862374_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_1322_273	chr10	-	1454	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	111	1	-17	-1	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_13220_145	chr12	+	2497	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	-143	8	-7	-8	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7389	False	NA	-4	True	ATTAAA	-7	NA	16860956	16876745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_13222_7	chr12	+	2344	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	-5	-11	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	88.3712182909245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTGCTGCGT	7391	False	NA	-7	True	ATTAAA	-4	NA	16860958	16876742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
Isoform_13224_133	chr12	+	2422	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	-12	8	2	-8	multi-exon	FALSE	canonical	2	127	junction_1	56.1505911713215	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7398	False	NA	-4	True	ATTAAA	-7	NA	16860965	16876745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
Isoform_13225_8	chr12	+	2283	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	95.7747357083276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTGCTGCGTGCC	7389	False	NA	-4	True	ATTAAA	-7	NA	16860956	16876745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
Isoform_13228_9	chr12	+	2996	22	ISM	ENSMUSG00000020580.11	ENSMUST00000220688.2	4357	33	-325	9863	-53	-9863	5prime_fragment	FALSE	canonical	1	36	junction_11	47.0657859662067	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAGAAAATGAAGAGA	1982	False	NA	NA	False	TATAAA	-18	NA	16944842	17018240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17005670_17005683_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211
Isoform_1323_91	chr10	-	1505	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	59	2	59	-2	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235325	80228374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_13231_2028	chr12	+	1735	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-6	396	-6	-396	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGTATGAAATTAG	NA	False	NA	18	True	AATAAA	-20	NA	17316589	17334375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
Isoform_13232_112	chr12	+	2132	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-6	-1	-6	1	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTGTGATTATCTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	17316589	17334772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
Isoform_13234_208	chr12	+	1757	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	22	396	22	-396	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAATGTATGAAATTAG	NA	False	NA	18	True	AATAAA	-20	NA	17316567	17334375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
Isoform_13250_125	chr12	+	3023	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	-2	0	-2	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398456	17480096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
Isoform_13255_1560	chr12	+	2020	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	178	10	0	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGGCATCAGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	17594972	17601075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_13256_89	chr12	+	2447	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	178	-417	0	-4	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGTAAATCTT	NA	False	NA	19	True	AATAAA	-14	NA	17594972	17601502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_13257_300	chr12	+	2066	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	132	10	-46	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGGCATCAGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	17594926	17601075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_13258_41	chr12	+	2105	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	93	10	-85	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGGCATCAGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	17594887	17601075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_13260_26	chr12	+	2178	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	20	10	20	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGGCATCAGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	17594814	17601075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
Isoform_1327_20	chr10	-	1536	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	-17	-297	-17	-3	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235273	80228375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
Isoform_13274_16	chr12	+	1648	5	NIC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	-46	-10	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	31.8541598539343	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	8578	False	NA	7	True	ATTAAA	-8	NA	17740810	17841924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_17741048_17817214_17817301_17836147_17836550_17837545_17837652_17841107
Isoform_13275_54	chr12	+	1557	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-41	10	-41	-10	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	8583	False	NA	7	True	ATTAAA	-8	NA	17740815	17841924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
Isoform_13276_4	chr12	+	1574	5	FSM	ENSMUSG00000071379.3	ENSMUST00000222944.2	697	5	-64	-813	-64	6	multi-exon	FALSE	canonical	3	5	junction_1	35.2304910553344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCCTGTGTTGCAGC	NA	False	NA	23	True	AATAAA	-11	NA	17778162	17841940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_17778310_17817214_17817301_17836147_17836550_17837545_17837652_17841107
Isoform_13277_3	chr12	+	3142	3	Fusion	ENSMUSG00000112970.2_ENSMUSG00000113857.2	novel	575	3	NA	NA	-288	728	intron_retention	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGATCAAATAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	18903583	18962087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_18903999_18955903_18957804_18961260
Isoform_13278_4	chr12	+	2026	4	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-214	67259	-8	1	intron_retention	FALSE	canonical	3	60	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAATGTGAGTGTGTT	NA	False	NA	NA	False	GATAAA	-18	NA	21161740	21250921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544
Isoform_13279_14	chr12	+	762	5	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-211	67259	-5	1	5prime_fragment	FALSE	canonical	3	55	junction_4	7.49583217528247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAATGTGAGTGTGTT	NA	False	NA	NA	False	GATAAA	-18	NA	21161743	21250921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880
Isoform_1328_12	chr10	-	1310	4	FSM	ENSMUSG00000035478.15	ENSMUST00000142997.8	1118	4	-193	1	-37	-1	multi-exon	FALSE	canonical	3	1197	junction_3	65.3214274866134	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80231197	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897
Isoform_13281_5	chr12	+	3165	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-193	373	5	-373	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTTGTTTAACCGTT	NA	False	NA	NA	False	ACTAAA	-14	NA	21161761	21317807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
Isoform_13283_1978	chr12	+	2265	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	13	221	13	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336371	21364836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
Isoform_13284_34	chr12	+	2338	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	-60	221	-60	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336298	21364836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
Isoform_13288_8	chr12	+	708	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	-21	1203	4	-621	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAATTTTGCTACTC	NA	False	NA	19	True	NA	NA	NA	21366393	21370156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
Isoform_13289_96	chr12	+	895	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	33	213	8	-213	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366422	21373607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
Isoform_1329_18	chr10	-	1678	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	59	-1	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235325	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_13290_5	chr12	+	773	5	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	8	-213	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	187.52666477064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366422	21373607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21373289
Isoform_13291_5	chr12	+	863	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	8	-213	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366422	21373607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
Isoform_13292_7	chr12	+	454	5	NIC	ENSMUSG00000109975.2	novel	357	4	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAAAGGCGTTTTTTTT	6109	False	NA	NA	False	ACTAAA	-20	NA	21593316	21604524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
Isoform_13293_6	chr12	+	633	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-9	163	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATCTTCTGTCTTAG	6091	False	NA	NA	False	ATTAAA	-15	NA	21593298	21604685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
Isoform_13294_97	chr12	+	1952	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	255	2	3	-2	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACACCTGGAAACTTGC	NA	False	NA	10	True	ATTAAA	-19	NA	24548612	24608536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
Isoform_13299_4	chr12	+	956	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-4	15048	0	-15048	5prime_fragment	FALSE	canonical	3	20	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAAAGGCCTGTAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	24622281	24631848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
Isoform_1330_46	chr10	-	1626	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235273	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
Isoform_13300_106	chr12	+	3966	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	112	8	112	-8	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAGTGATGTGTTAT	NA	False	NA	10	True	TATAAA	-21	NA	24701384	24712780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
Isoform_13302_12	chr12	+	3892	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	82	112	82	-112	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTTTGTTTTATGTAA	NA	False	NA	-94	True	AATAAA	-14	NA	24701354	24712676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
Isoform_13303_3	chr12	+	1782	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	57	2247	57	-2247	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTGGTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	24701329	24710541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
Isoform_13312_5025	chr12	+	2098	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	42	53	42	-53	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	5025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGGCATACAA	NA	False	NA	19	True	AATAAA	-19	NA	24758281	24764092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
Isoform_13313_327	chr12	+	2143	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	9	41	9	-41	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758248	24764104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
Isoform_1332_135	chr10	-	1528	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235273	80228375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_1333_31	chr10	-	1589	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	52	-1	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235332	80228373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
Isoform_13333_49	chr12	+	2826	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-45	-430	-31	-1	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGATTCTATCTAAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	24881576	25010303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_13337_5	chr12	+	2882	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-49	-482	-35	51	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGAGTGACTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	24881572	25010355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_13338_11	chr12	+	2744	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-51	4099	-51	-7	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTGTTAGATTCTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	24881556	25010297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_13340_3	chr12	+	2652	11	NIC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-40	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.1230539746591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGGGTGTTAGATTC	NA	False	NA	NA	False	ATTAAA	-21	NA	24881567	25010294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_24881774_24928189_24928336_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
Isoform_13341_194	chr12	+	1419	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	35	1	13	-1	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699635	28709587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
Isoform_13343_13	chr12	+	1415	8	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	81.9245546406035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699635	28709587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707635_28707717_28708169_28708295_28708991
Isoform_13345_5	chr12	+	2540	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-893	5	-893	-5	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTTGGTCTCTCGAGA	NA	False	NA	10	True	NA	NA	NA	28724336	28732169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
Isoform_13346_125	chr12	+	1654	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-4	2	-4	-2	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTCTCTCGAGAGTT	NA	False	NA	13	True	NA	NA	NA	28725225	28732172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
Isoform_13348_159	chr12	+	1680	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	37	2374	1	0	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1135	False	NA	7	True	NA	NA	NA	28801838	28917490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
Isoform_13349_36	chr12	+	2932	6	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	22	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	92	junction_5	34.3941855551196	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30634446	30641218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650_30640574_30640594
Isoform_13353_15	chr12	+	1711	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	34	5	10	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8073	False	NA	11	True	AATAAA	-19	NA	30961700	31010156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
Isoform_13354_14	chr12	+	1753	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	-8	5	-8	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8031	False	NA	11	True	AATAAA	-19	NA	30961658	31010156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
Isoform_13355_3	chr12	+	2680	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	92	316	92	-316	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCTAGTCCTCAGGTG	NA	False	NA	NA	False	TATAAA	-14	NA	31123951	31129934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_31125322_31128624
Isoform_13356_4	chr12	+	5695	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	9	-147	9	1	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCTATGTTTCTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	31315241	31379639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
Isoform_13358_4	chr12	+	5776	33	FSM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	1	1	1	-1	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATCCTATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	31315293	31379637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
Isoform_13359_7	chr12	+	2579	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-3	11806	-3	-198	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCTTCCTCTTTCTGT	NA	False	NA	NA	False	ACTAAA	-16	NA	31704864	31975823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
Isoform_13360_4	chr12	+	3951	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	9	10422	9	1186	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAGCACCACAGGATATC	NA	False	NA	NA	False	AATAAA	-25	NA	31704876	31977207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
Isoform_13361_10	chr12	+	2980	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	15	2	15	-2	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	NA	False	NA	10	True	AATAAA	-17	NA	31704882	31987627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
Isoform_13362_4	chr12	+	1173	5	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	245741	-1	6489	1	3prime_fragment	FALSE	canonical	3	25	junction_4	29.4819860253681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTCTTCCTTCCAG	1011	False	NA	13	True	AATAAA	-20	NA	31950608	31987630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
Isoform_13363_8	chr12	+	2709	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	7	-1741	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870340	32901607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_13365_125	chr12	+	2803	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-17	1741	-17	-1741	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870316	32901607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_13366_290	chr12	+	2258	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	19	2250	19	-2250	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTGTGGTGTTGTAC	NA	False	NA	13	True	AATAAA	-16	NA	32870352	32901098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_13370_17	chr12	+	4508	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	37	-18	37	18	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGATTGTGTGTATC	NA	False	NA	11	True	AATAAA	-36	NA	32870370	32903366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
Isoform_13376_144	chr12	+	1991	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	29	-1	29	1	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGAATGCCCCGTTG	8454	False	NA	NA	False	AATAAA	-8	NA	33004211	33026904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
Isoform_13378_7	chr12	+	4121	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	29	-2131	29	-825	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTTAAGATTATACTT	8454	False	NA	NA	False	NA	NA	NA	33004211	33029034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
Isoform_13381_12	chr12	+	463	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	210	0	210	0	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGTGTCTGGTTTCA	NA	False	NA	4	True	AATAAA	-14	NA	33445062	33451266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
Isoform_13382_69	chr12	+	2340	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	1985	0	1692	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTTGTCTTTCCCTCC	NA	False	NA	NA	False	AATAAA	-13	NA	33479633	33489406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
Isoform_13390_5	chr12	+	4131	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	9	2091	9	1	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTTTTAAAAATATGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	35097193	35195387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
Isoform_13392_5	chr12	+	4197	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	8	2026	8	66	multi-exon	TRUE	canonical	3	72	junction_14	10.0218960281975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCCTTTGGTGTATA	NA	False	NA	NA	False	AATAAA	-9	NA	35097192	35195452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
Isoform_13393_275	chr12	+	2441	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	14	1	14	-1	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTGTTTCATAATTCG	NA	False	NA	20	True	AATAAA	-19	NA	36207126	36247289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
Isoform_13397_15	chr12	+	2509	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	211	3856	9	379	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAGAAAAAGAAAAAA	536	False	NA	NA	False	AATGAA	-4	NA	38830291	38916627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
Isoform_13405_16	chr12	+	3426	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	38	10043	19	-4	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTAATCAAGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	44315968	44359272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
Isoform_13406_21	chr12	+	3036	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	39	10432	20	8	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGGACAGTTTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	44315969	44358883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
Isoform_13408_3	chr12	+	2934	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	254	3615	27	1	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTCTAGAACCTATGT	NA	False	NA	NA	False	ATTAAA	-41	NA	51395097	51420154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
Isoform_1341_914	chr10	-	413	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	30	2	-5	-1	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	914	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCTGGCTCCTTCCTCA	NA	False	NA	-3	True	ATTAAA	-19	NA	80242634	80238832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80238990_80239969_80240121_80242529
Isoform_13412_94	chr12	+	2092	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	0	4	0	3	multi-exon	FALSE	canonical	3	358	junction_5	42.0133700610757	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAGCTTATTCTTGTT	NA	False	NA	11	True	AATAAA	-11	NA	51424362	51496880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
Isoform_13413_4	chr12	+	2758	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-8	-1	-8	1	multi-exon	TRUE	canonical	3	21	junction_13	120.151925523899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACATTTTTTAAGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	51424354	51463999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
Isoform_13414_3	chr12	+	2473	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-14	-3	2	3	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTATTAACACTAGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51640125	51652547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
Isoform_13415_5	chr12	+	2031	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-10	435	6	-435	multi-exon	FALSE	canonical	0	0	junction_1	2.34608870919344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTTCCCTCTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	51640129	51652109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
Isoform_13416_6	chr12	+	1053	6	FSM	ENSMUSG00000020955.10	ENSMUST00000021338.10	1035	6	-22	4	-18	-4	multi-exon	FALSE	canonical	3	33	junction_1	14.8458748479165	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGTGACGTTTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	51737797	51785711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51777670_51777683_51785335
Isoform_13418_104	chr12	+	1181	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	20	1786	1	-1786	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGCTCTATGATGATT	NA	False	NA	9	True	AATAAA	-18	NA	52144539	52357741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
Isoform_13419_4	chr12	+	3982	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-38	-25694	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGTAAAGGAAGATAAAA	NA	False	NA	NA	False	GATAAA	-13	NA	52550716	52566728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_52550832_52562861
Isoform_13420_20	chr12	+	3908	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-6	-25692	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAGGAAGATAAAAAG	NA	False	NA	NA	False	GATAAA	-15	NA	52550792	52566730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_52550832_52562861
Isoform_13426_140	chr12	+	2157	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	252	2089	-12	387	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2828	False	NA	NA	False	AATAAA	-18	NA	55127298	55160063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_13428_15	chr12	+	2448	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	-42	2092	-42	384	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGTTCGTTAACTTT	2534	False	NA	NA	False	AATAAA	-15	NA	55127004	55160060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_13429_7	chr12	+	2555	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	272	1671	8	805	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGGTTCATTGATAA	2848	False	NA	NA	False	ATTAAA	-18	NA	55127318	55160481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_1343_42	chr10	-	2866	19	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	1	14	combination_of_known_junctions	FALSE	canonical	3	125	junction_2	284.523475349032	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269480	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80246231_80246456_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13430_12	chr12	+	2392	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	271	1835	7	641	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTCGTGGTCCTTGATT	2847	False	NA	NA	False	NA	NA	NA	55127317	55160317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
Isoform_13433_331	chr12	+	2157	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	1235	-12	-1235	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2608	False	NA	NA	False	AATAAA	-18	NA	55202142	55235123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_13434_26	chr12	+	2413	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	979	-12	-979	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGTGGTCCTTGATTGT	2608	False	NA	NA	False	NA	NA	NA	55202142	55235379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_13435_9	chr12	+	2460	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	-49	1235	-49	-1235	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2305	False	NA	NA	False	AATAAA	-18	NA	55201839	55235123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_13436_5	chr12	+	2575	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	817	-12	-817	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGGTTCATTGATAA	2608	False	NA	NA	False	ATTAAA	-18	NA	55202142	55235541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_13437_11	chr12	+	1401	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-49	2511	-49	-2511	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTGGATTTCCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55246327	55261442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
Isoform_13438_6	chr12	+	805	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	26	3091	26	-3091	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTCCAATCAGGAGCT	NA	False	NA	NA	False	TATAAA	-14	NA	55171279	55185798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
Isoform_13439_82	chr12	+	2155	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	254	1233	254	-417	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTTCGTTAACTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55277206	55309388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_13440_10	chr12	+	2575	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	254	813	254	3	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGGTTCATTGATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	55277206	55309808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_13441_13	chr12	+	2445	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	-34	1231	-34	-415	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	55276918	55309390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_13442_11	chr12	+	2410	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	254	978	254	-162	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTCGTGGTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	55277206	55309643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_13444_3	chr12	+	2710	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	-45	977	-45	-161	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTCGTGGTCCTTGATT	NA	False	NA	NA	False	NA	NA	NA	55276907	55309644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
Isoform_13445_3	chr12	+	2498	16	Fusion	ENSMUSG00000079108.7_ENSMUSG00000112368.2	novel	3642	16	NA	NA	250	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	55277202	55326113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
Isoform_13446_12	chr12	+	2208	8	NIC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	145.251365513972	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTAGTTGGTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	55350055	55429279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_55350123_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_13447_111	chr12	+	2496	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	634	-8	10	8	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTTGCAGCGTCAAA	NA	False	NA	27	True	AATAAA	-28	NA	55350055	55429289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_13448_9	chr12	+	3009	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	117	-4	4	4	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGGTTTTGCAGCGT	NA	False	NA	23	True	AATAAA	-24	NA	55349538	55429285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
Isoform_13450_125	chr12	+	503	3	ISM	ENSMUSG00000021023.15	ENSMUST00000183654.2	943	7	73906	21	73906	-4	3prime_fragment	FALSE	canonical	3	389	junction_1	18	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAGTTTAGTTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	55423976	55429277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_55424048_55426066_55426263_55429041
Isoform_13451_1898	chr12	+	977	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	63	2	43	-2	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCGGTGCATCCTGTCT	NA	False	NA	14	True	AATAAA	-15	NA	55445622	55465237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
Isoform_13452_74	chr12	+	1035	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	5	2	5	-2	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCGGTGCATCCTGTCT	NA	False	NA	14	True	AATAAA	-15	NA	55445564	55465237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
Isoform_13457_3	chr12	+	2566	9	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	56	2071	10	1682	5prime_fragment	FALSE	canonical	3	160	junction_3	21.242645786248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	55883164	55914450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735
Isoform_13458_69	chr12	+	2554	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	55	0	9	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55883163	55916521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
Isoform_13459_28	chr12	+	2609	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55883108	55916521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
Isoform_13461_33	chr12	+	3969	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	34	-2283	34	2283	multi-exon	FALSE	canonical	3	317	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGTCTATGTTTTGTTT	NA	False	NA	13	True	ATTAAA	-17	NA	57277231	57288951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_57277398_57285148
Isoform_13464_8	chr12	+	4033	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	-27	-2286	-27	2286	multi-exon	FALSE	canonical	3	317	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	16	True	ATTAAA	-20	NA	57277170	57288954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_57277398_57285148
Isoform_13468_3	chr12	+	1159	5	FSM	ENSMUSG00000047022.19	ENSMUST00000148418.8	1168	5	12	-3	2	3	multi-exon	FALSE	canonical	3	68	junction_4	7.69740215917033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTATGTATTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	57277233	57372864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309
Isoform_13469_3	chr12	+	1375	8	ISM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	-10	92682	0	-2043	5prime_fragment	FALSE	canonical	3	52	junction_6	11.4196393666922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATCATCAGCCGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	57277221	57411336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912
Isoform_13470_3	chr12	+	1431	10	FSM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	-8	1	2	-1	multi-exon	FALSE	canonical	3	42	junction_9	13.9602610609146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57277223	57504017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
Isoform_13471_19	chr12	+	2123	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	-8	2	2	-2	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	57277223	57543983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
Isoform_13472_3	chr12	+	2168	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	47	387	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCTGTAAAGTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	57277244	57287055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_57277398_57281366_57281475_57285148
Isoform_13473_3	chr12	+	4076	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	34	2282	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGGTCTATGTTTTGTT	NA	False	NA	12	True	ATTAAA	-16	NA	57277231	57288950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_57277398_57281366_57281475_57285148
Isoform_13474_118	chr12	+	1009	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	53	526	-8	57	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAAATGTCTGTG	NA	False	NA	5	True	AATATA	-16	NA	59060231	59074730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13476_79	chr12	+	1460	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	62	66	1	5	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060240	59075190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13478_52	chr12	+	1064	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-2	526	-2	57	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAAATGTCTGTG	NA	False	NA	5	True	AATATA	-16	NA	59060176	59074730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13480_33	chr12	+	1524	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-2	66	-2	5	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060176	59075190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13483_4	chr12	+	1917	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	43	-372	-18	372	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTTCATGGTTTTGCT	NA	False	NA	NA	False	AAAACA	-9	NA	59060221	59075628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13484_11	chr12	+	2248	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-15	55	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTCTGAAATGTCTG	NA	False	NA	3	True	AATATA	-14	NA	59060224	59074728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13485_9	chr12	+	2758	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-2	5	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060176	59075190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
Isoform_13493_10	chr12	+	3277	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	63	145	4	-145	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACTGTTTAAAATTAGT	NA	False	NA	8	True	AATAAA	-14	NA	59113732	59120639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13495_11	chr12	+	2455	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	93	937	13	-937	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCATCTTTTTTAACTA	NA	False	NA	5	True	AATAAA	-16	NA	59113762	59119847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13496_8	chr12	+	3314	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	38	133	0	-133	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAGTACTTGTATTAAA	NA	False	NA	20	True	AATAAA	-26	NA	59113707	59120651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13497_51	chr12	+	931	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	63	2491	4	-29	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCATCAGGTGGTGC	NA	False	NA	NA	False	AATAAA	-40	NA	59113732	59118293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13501_34	chr12	+	953	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	41	2491	3	-29	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCATCAGGTGGTGC	NA	False	NA	NA	False	AATAAA	-40	NA	59113710	59118293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13505_4	chr12	+	3415	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	65	5	6	-5	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAACAAATATCTTC	NA	False	NA	4	True	ATTAAA	-38	NA	59113734	59120779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
Isoform_13512_48	chr12	+	2830	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	195	1409	0	1	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178266	59236960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_13513_29	chr12	+	2858	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	167	1409	0	1	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178238	59236960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_13518_9	chr12	+	2808	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	-22	-1	-22	1	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGGTATTAAT	NA	False	NA	8	True	AATAAA	-16	NA	59178216	59236960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_13519_11	chr12	+	2756	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	28	1	0	-1	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTGTTTGGTATTA	NA	False	NA	6	True	AATAAA	-14	NA	59178266	59236958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_1352_80	chr10	-	2896	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-28	82	-28	12	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269509	80245429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13520_17	chr12	+	2528	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	28	229	0	-6	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAATCTTATGGGTAA	NA	False	NA	-4	True	AATAAA	-10	NA	59178266	59236730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_13521_10	chr12	+	2557	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	6	222	6	1	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTATGGGTAAATTATTT	NA	False	NA	3	True	AATAAA	-17	NA	59178244	59236737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
Isoform_13522_3	chr12	+	2879	4	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-64	41693	-64	-1577	5prime_fragment	FALSE	canonical	3	80	junction_1	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACGATGGTGAAGATC	NA	False	NA	NA	False	AAAAAG	-33	NA	65012513	65027654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356
Isoform_13526_3	chr12	+	6431	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-59	0	-59	0	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012518	65069347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
Isoform_13528_5	chr12	+	3071	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7510	False	NA	23	True	AATAAA	-20	NA	65083109	65108933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_1353_209	chr10	-	2916	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	2	32	-2	1	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269479	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13532_24	chr12	+	2830	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	9	1230	8	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7516	False	NA	20	True	AATAAA	-17	NA	65083115	65108930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_13533_4	chr12	+	4062	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	5	2	4	-2	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCTGTGGTCTCCT	7512	False	NA	6	True	AATAAA	-14	NA	65083111	65110158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_13534_3	chr12	+	3456	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	1	0	1	0	multi-exon	TRUE	canonical	3	88	junction_9	125.885678620058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7509	False	NA	19	True	AATAAA	-16	NA	65083108	65108929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_13535_7	chr12	+	2735	12	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	2147	intron_retention	FALSE	canonical	3	88	junction_8	111.355361473643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTAACTTATTGATAAG	7511	False	NA	NA	False	AAAAAG	-16	NA	65083110	65106719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644
Isoform_13536_5	chr12	+	3580	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	88	junction_8	113.573842725688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	7511	False	NA	17	True	AATAAA	-14	NA	65083110	65108927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_13537_3	chr12	+	3489	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	3	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7508	False	NA	23	True	AATAAA	-20	NA	65083107	65108933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
Isoform_1354_327	chr10	-	2863	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	5	82	1	12	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269476	80245429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13541_3	chr12	+	1866	9	ISM	ENSMUSG00000055884.9	ENSMUST00000223401.2	4050	11	0	5319	0	2052	5prime_fragment	FALSE	canonical	3	55	junction_4	42.725138969932	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAACAACAAAAAAATAACT	9284	False	NA	NA	False	NA	NA	NA	65122380	65142910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494
Isoform_13544_3	chr12	+	4979	20	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-10	10325	-7	-43	5prime_fragment	TRUE	canonical	3	55	junction_4	32.0266509518422	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAATTGTCTAGAAT	9273	False	NA	NA	False	AGTAAA	-41	NA	65122369	65168507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303
Isoform_13546_14	chr12	+	2016	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	213	-1	9	1	multi-exon	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGACCTCTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	65272503	65275229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_65274272_65274981
Isoform_13548_30	chr12	+	1465	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	33	2	5	2	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAATGTCTCAGCAGT	NA	False	NA	7	True	ATTAAA	-21	NA	69215620	69225781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
Isoform_13549_8	chr12	+	769	3	FSM	ENSMUSG00000034883.10	ENSMUST00000222520.2	767	3	0	-2	0	2	multi-exon	FALSE	canonical	3	25	junction_2	59	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAATGTCTCAGCAGT	NA	False	NA	7	True	ATTAAA	-21	NA	69215594	69225781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69215837_69218635_69218735_69225353
Isoform_13551_6	chr12	+	2595	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	21	4	21	-4	multi-exon	FALSE	canonical	1	2	junction_6	3.37474278855276	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTTCAGTGTGAATT	NA	False	NA	NA	False	AATAAA	-12	NA	69288626	69331402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
Isoform_13552_15	chr12	+	3012	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-9	-1098	-9	1098	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGATGTGTATCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	69343486	69358559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_13553_80	chr12	+	1692	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-9	222	-9	-222	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTCTATTGTTAAAG	NA	False	NA	15	True	AATAAA	-15	NA	69343486	69357239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
Isoform_13555_16	chr12	+	3835	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-104	-2197	-104	2197	multi-exon	FALSE	canonical	3	1327	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTATGTTACTT	NA	False	NA	14	True	AATAAA	-17	NA	69418819	69422754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69418998_69419097
Isoform_13556_74	chr12	+	3746	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-15	-2197	-15	2197	multi-exon	FALSE	canonical	3	1327	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTATGTTACTT	NA	False	NA	14	True	AATAAA	-17	NA	69418908	69422754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69418998_69419097
Isoform_13557_710	chr12	+	1522	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	15	-3	15	3	multi-exon	FALSE	canonical	3	1327	junction_1	0	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCGTTTGTCTTTTAT	NA	False	NA	33	True	AGTAAA	-22	NA	69418938	69420560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69418998_69419097
Isoform_13558_104	chr12	+	1591	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-54	-3	-54	3	multi-exon	FALSE	canonical	3	1327	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCGTTTGTCTTTTAT	NA	False	NA	33	True	AGTAAA	-22	NA	69418869	69420560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69418998_69419097
Isoform_13563_6	chr12	+	776	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-5	828	-5	-826	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTGTCTGGTGTCAC	NA	False	NA	NA	False	ATTAAA	-10	NA	69771718	69790606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_13564_6	chr12	+	1605	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTAGTCTTTACTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	69771721	69791438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_13565_13	chr12	+	673	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-14	826	-2	-826	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTGTCTGGTGTCAC	NA	False	NA	NA	False	ATTAAA	-10	NA	69771721	69790606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_13566_9	chr12	+	1477	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	11	-3	5	1	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTAGTCTTTACTTT	NA	False	NA	5	True	AATAAA	-17	NA	69771746	69791435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_13567_22	chr12	+	2018	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	7	4	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTAGTCTTTACTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	69771748	69791438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
Isoform_13568_128	chr12	+	2336	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	43	416	43	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499911	70514398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_1357_45	chr10	-	2946	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-28	32	-28	1	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269509	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13570_22	chr12	+	2750	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	44	1	44	-1	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTGGTGTTCTCATAA	NA	False	NA	12	True	ATTAAA	-15	NA	70499912	70514813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
Isoform_13571_3	chr12	+	3171	10	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-47	-3646	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	12.7347100283506	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATATGTTTGTTTGT	740	False	NA	NA	False	AATAAA	-23	NA	70872240	70938777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705
Isoform_13572_17	chr12	+	4678	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTCTTGTTATTATA	746	False	NA	NA	False	AATAAA	-20	NA	70872246	70949007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
Isoform_13576_4	chr12	+	1926	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	-56	-1255	-28	1255	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAAAAAATATTTCTTT	9675	False	NA	NA	False	NA	NA	NA	70984660	70995741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
Isoform_13578_219	chr12	+	1320	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	49	2653	-9	4	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGCTTATTTCAAATAT	9694	False	NA	NA	False	AATAAA	-17	NA	70984679	71008839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_13579_46	chr12	+	1537	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	49	2436	-9	221	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTATTAGTTTATTA	9694	False	NA	6	True	AATAAA	-15	NA	70984679	71009056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_13580_48	chr12	+	1457	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	50	2515	-8	142	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGTCGTAT	9695	False	NA	4	True	NA	NA	NA	70984680	71008977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
Isoform_13586_1301	chr12	+	929	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	72	1845	4	1	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4792	False	NA	2	True	ATTAAA	-13	NA	71021466	71041276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_13588_61	chr12	+	981	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	72	1793	4	49	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGATTAAAAATTCTTAG	4792	False	NA	54	True	ATTAAA	-13	NA	71021466	71041328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_13589_34	chr12	+	1349	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	72	1425	4	1	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4792	False	NA	NA	False	NA	NA	NA	71021466	71041696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_13593_17	chr12	+	983	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	45	-1	1	1	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4815	False	NA	2	True	ATTAAA	-13	NA	71021489	71041276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_13595_48	chr12	+	921	11	FSM	ENSMUSG00000060073.10	ENSMUST00000071704.4	875	11	-19	-27	7	1	multi-exon	FALSE	canonical	3	320	junction_2	1129.97747322679	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTGGGTAATTGAA	4795	False	NA	2	True	ATTAAA	-13	NA	71021469	71041276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
Isoform_13600_3	chr6	-	698	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	94	-107	94	107	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATTGAAAAAAAAAAAAA	7212	False	NA	NA	False	ATTAAA	-13	NA	31119504	31118806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_31118800_31119500
Isoform_13601_4	chr6	-	272	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	526	-113	526	113	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAAGT	7644	False	NA	NA	False	ATTAAA	-19	NA	31119072	31118800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_31118800_31119100
Isoform_13606_6	chr12	+	1721	16	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-1	31422	-1	-91	5prime_fragment	FALSE	canonical	3	75	junction_5	8.70146858613852	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGACGCAGGTGATG	3380	False	NA	NA	False	AATAGA	-43	NA	71062762	71113944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852
Isoform_13608_6	chr12	+	2146	18	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-2	26727	-2	-3540	5prime_fragment	FALSE	canonical	3	75	junction_5	8.6192028308566	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAACAAAAGAAGAA	3379	False	NA	NA	False	NA	NA	NA	71062761	71118639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581
Isoform_13612_7	chr12	+	2329	12	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	329	82106	329	6310	5prime_fragment	FALSE	canonical	3	118	junction_6	8.97839463645555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTTATAGAAAAAGTGGA	NA	False	NA	NA	False	ATTAAA	-23	NA	71183950	71207971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897
Isoform_13613_7	chr12	+	2352	13	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	334	80699	334	7717	5prime_fragment	FALSE	canonical	3	118	junction_6	8.91471941354422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGATTTGATCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	71183955	71209378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349
Isoform_13614_5	chr12	+	5167	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	-665	5	327	-5	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTCTGGCTGTTTCTT	NA	False	NA	17	True	AATAAA	-15	NA	71183948	71290072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
Isoform_13615_11	chr12	+	3837	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-191	-1198	-91	-15	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGTGCTGGCTGTTG	1122	False	NA	NA	False	TATAAA	-21	NA	71356566	71366866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
Isoform_13616_16	chr12	+	3636	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	0	14	0	-14	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTGCTGGCTGTTGG	1213	False	NA	NA	False	TATAAA	-22	NA	71356657	71366867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
Isoform_13617_12	chr12	+	3743	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-108	15	-108	-15	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGTGCTGGCTGTTG	1105	False	NA	NA	False	TATAAA	-21	NA	71356549	71366866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
Isoform_13619_4	chr12	+	3710	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-19	-2071	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAGAAAAGAGGAAATTT	1822	False	NA	NA	False	AAAACA	-34	NA	71877870	72037028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_13620_3	chr12	+	5800	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTTTTCTATGCATT	1810	False	NA	21	True	AATAAA	-21	NA	71877858	72039106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
Isoform_13623_68	chr12	+	1021	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	251	20	251	-16	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132881	72147615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13624_36	chr12	+	1232	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132630	72147615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_72132677_72132716_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13625_6	chr12	+	1830	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	56	-594	56	-6	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132686	72148229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13627_5	chr12	+	1863	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132630	72148229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_72132698_72132720_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13628_7	chr12	+	1639	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	245	-592	245	-8	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAACTCCATGTTCTG	NA	False	NA	6	True	AATAAA	-12	NA	72132875	72148227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13629_28	chr12	+	1216	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	56	20	56	-16	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132686	72147615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_1363_189	chr10	-	2916	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	5	-1	1	1	multi-exon	FALSE	canonical	3	359	junction_12	245.119472004073	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269476	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13630_24	chr12	+	1003	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	251	620	251	-16	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132881	72147615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13632_4	chr12	+	1199	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	30	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	72132660	72147615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_72132697_72132721_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13634_3	chr12	+	1812	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	56	6	56	-6	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTCCATGTTCTGAT	NA	False	NA	8	True	AATAAA	-14	NA	72132686	72148229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
Isoform_13635_18	chr12	+	648	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	1	38253	1	-38253	5prime_fragment	FALSE	canonical	3	96	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTAGTGTGTGGTCT	NA	False	NA	20	True	AATACA	-19	NA	72583157	72588640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_72583314_72588148
Isoform_13636_17	chr12	+	1013	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	0	37889	0	-37889	5prime_fragment	FALSE	canonical	3	96	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGGAGAGTTAGGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	72583156	72589004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_72583314_72588148
Isoform_13637_4	chr12	+	4323	11	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	25.5781156459971	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTCTTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	72583132	72626891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616597_72620263_72621277_72622127_72622315_72626077
Isoform_13642_6	chr12	+	4040	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-70	-70	34	70	multi-exon	FALSE	canonical	3	365	junction_1	26.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAATCTGAGATCCTTG	NA	False	NA	7	True	AATAAA	-12	NA	72808018	72836244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72808406_72830456_72831311_72833445
Isoform_13646_41	chr12	+	2742	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	47	4879	47	376	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	8	True	AATAAA	-16	NA	72808031	72841714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
Isoform_13652_56	chr12	+	1368	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	1	1136	1	1	multi-exon	FALSE	non_canonical	0	0	junction_6	110.46488037344	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGTGGGATTTTTTT	NA	False	NA	7	True	AATAAA	-17	NA	73170491	73319626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
Isoform_13654_3	chr12	+	1870	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	56	1106	-22	1078	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTGCCAA	NA	False	NA	NA	False	NA	NA	NA	73333608	73399717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
Isoform_13658_63	chr12	+	3988	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	97	639	97	-639	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8455	False	NA	19	True	AATAAA	-19	NA	73954774	73993665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13659_24	chr12	+	4244	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	106	374	106	-374	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGCAGTATGAATGGA	8464	False	NA	NA	False	ATTAAA	-21	NA	73954783	73993930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13660_15	chr12	+	4620	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	104	0	104	0	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8462	False	NA	11	True	AATAAA	-22	NA	73954781	73994304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13662_4	chr12	+	4100	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-16	640	-16	-640	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGGGTCAGCGCTTA	8342	False	NA	18	True	AATAAA	-18	NA	73954661	73993664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13663_33	chr12	+	3946	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	97	-639	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8455	False	NA	19	True	AATAAA	-19	NA	73954774	73993665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13664_10	chr12	+	4211	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	97	-374	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGCAGTATGAATGGA	8455	False	NA	NA	False	ATTAAA	-21	NA	73954774	73993930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13665_10	chr12	+	4585	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	97	0	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8455	False	NA	11	True	AATAAA	-22	NA	73954774	73994304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13667_20	chr12	+	3984	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	104	-639	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	100.579545127025	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8462	False	NA	19	True	AATAAA	-19	NA	73954781	73993665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13668_8	chr12	+	4621	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	104	-2	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	100.579545127025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCATATCTTTCTAGT	8462	False	NA	9	True	AATAAA	-20	NA	73954781	73994302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13670_16	chr12	+	3946	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	100	-639	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	110.208707385912	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8458	False	NA	19	True	AATAAA	-19	NA	73954777	73993665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
Isoform_13673_23	chr12	+	1710	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-12	4577	-12	282	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTAGTGTGTGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	74011287	74031163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
Isoform_13674_4	chr12	+	2128	13	FSM	ENSMUSG00000063450.15	ENSMUST00000157033.2	2121	13	-28	21	-1	-21	multi-exon	FALSE	canonical	0	0	junction_4	0.897527467855751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAATCAATCT	NA	False	NA	NA	False	NA	NA	NA	75865095	75952656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032
Isoform_13675_10	chr12	+	3070	23	ISM	ENSMUSG00000063450.15	ENSMUST00000143031.8	21704	115	0	187913	0	9126	5prime_fragment	TRUE	canonical	0	0	junction_4	1.26621711610765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAATAAATAAAGAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	75865091	75969787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032_75952146_75953484_75953648_75955641_75955721_75955949_75956138_75957789_75957955_75959076_75959200_75961962_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698
Isoform_13676_4	chr12	+	2509	16	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-17105	7846	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	2.8095076674274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGTGGCTCTTGGTTTA	2277	False	NA	NA	False	NA	NA	NA	76051968	76082435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303
Isoform_13680_1462	chr12	+	3117	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	124	0	9	0	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8035	False	NA	9	True	AATAAA	-17	NA	76302195	76366577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_13681_193	chr12	+	3326	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	-85	0	-85	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7826	False	NA	9	True	AATAAA	-17	NA	76301986	76366577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_13682_398	chr12	+	3239	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	0	2	0	-1	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	7911	False	NA	7	True	AATAAA	-15	NA	76302071	76366575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
Isoform_13694_3	chr12	+	3556	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	137	8497	137	-8497	multi-exon	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	76417176	76435227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13695_24	chr12	+	3395	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	298	8497	298	-8497	multi-exon	FALSE	canonical	3	110	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	76417337	76435227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13696_16	chr12	+	3439	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	254	8497	254	-8497	multi-exon	FALSE	canonical	3	110	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	76417293	76435227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13697_3	chr12	+	3780	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-87	8497	-87	-8497	multi-exon	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	76416952	76435227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13698_3	chr12	+	3679	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	307	8204	307	-8204	multi-exon	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTTAATGTGAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	76417346	76435520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13700_3	chr12	+	3686	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-1	8505	-1	-8505	multi-exon	FALSE	canonical	3	110	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATAAATCTGGTTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	76417038	76435219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76417505_76431999
Isoform_13701_10	chr12	+	2702	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	9	-1856	9	1	multi-exon	FALSE	canonical	3	44	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTCAGTCGTGGTG	NA	False	NA	11	True	NA	NA	NA	76491279	76497290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76491440_76494748
Isoform_13703_9	chr12	+	4960	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGGCCTCCTTC	7221	False	NA	21	True	NA	NA	NA	76580330	76625815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_13705_17	chr12	+	4956	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	-64	-357	-4	0	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTGTGTGTGGCCTCCT	7220	False	NA	19	True	NA	NA	NA	76580329	76625813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
Isoform_13706_91	chr12	+	599	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	28	49	-9	12	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAATAGC	NA	False	NA	-40	True	NA	NA	NA	76812339	76829905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
Isoform_13709_427	chr12	+	2599	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	14	0	-5	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884201	76968186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
Isoform_1371_259	chr10	-	2868	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-7	-32	1	14	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269476	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13712_41	chr12	+	2956	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-92	-99	-69	-4	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77284829	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13713_4	chr12	+	2806	11	NIC	ENSMUSG00000021065.17	novel	2765	12	NA	NA	-27	-19	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	30.4065782356384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATTTCAAAAAG	NA	False	NA	-10	True	NA	NA	NA	77284871	77522740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_77284974_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13714_12	chr12	+	3317	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-316	357	-64	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285522	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13715_27	chr12	+	3285	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-284	357	-32	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285554	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13716_40	chr12	+	3222	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-221	357	31	-4	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285617	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_1372_79	chr10	-	2916	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-7	-80	1	1	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269476	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13721_10	chr12	+	3117	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	43	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285629	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13722_6	chr12	+	3211	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-51	-4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTGTGAAGTT	NA	False	NA	5	True	AATAAA	-6	NA	77285535	77522755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
Isoform_13725_8	chr12	+	3200	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	101	-1	101	1	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTATTGTGCGGCCTT	NA	False	NA	22	True	AATAAA	-25	NA	78273527	78731542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_13726_5	chr12	+	3312	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-13	1	-13	-1	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGTGCGGCC	NA	False	NA	20	True	AATAAA	-23	NA	78273413	78731540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
Isoform_1373_45	chr10	-	2949	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-40	-80	-28	1	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269509	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13731_5	chr12	+	5293	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGACACTTTCT	NA	False	NA	17	True	AATAAA	-26	NA	78795654	78887361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
Isoform_13736_888	chr12	+	1464	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	251	1690	-15	-1690	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTAGGCTTCTTCCTTCT	NA	False	NA	23	True	AATAAA	-16	NA	78908843	78932094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_13738_634	chr12	+	1490	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	225	1690	-41	-1690	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTAGGCTTCTTCCTTCT	NA	False	NA	23	True	AATAAA	-16	NA	78908817	78932094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_13739_20	chr12	+	1858	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	-143	1690	-143	-1690	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTAGGCTTCTTCCTTCT	NA	False	NA	23	True	AATAAA	-16	NA	78908449	78932094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_13741_64	chr12	+	1674	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	254	1477	-12	-1477	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGCAGTGATAACTT	NA	False	NA	30	True	ATTAAA	-23	NA	78908846	78932307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
Isoform_13746_4	chr12	+	6411	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	21	7	21	0	multi-exon	TRUE	canonical	3	125	junction_6	14.4205688557161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAACTGTGTGTTGTGG	6146	False	NA	5	True	AATAAA	-17	NA	79075957	79128422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
Isoform_13747_10	chr12	+	5371	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	43	1025	43	1	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAATAATAATAATAAAAA	6168	False	NA	NA	False	NA	NA	NA	79075979	79127404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
Isoform_13748_4	chr12	+	1454	10	NIC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	-30	-10777	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	12.8754719438853	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAGAGAGAGA	8683	False	NA	NA	False	NA	NA	NA	79344094	79850375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963
Isoform_13749_4	chr12	+	1512	11	NIC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	14.8811961884789	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCGGGGTCTCCAAAG	8724	False	NA	2	True	AATAAA	-35	NA	79344135	79861147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
Isoform_13750_3	chr12	+	1243	3	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	123	16954	-2	-1	5prime_fragment	FALSE	canonical	3	212	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATTGGTGT	2786	False	NA	NA	False	AAGAAA	-16	NA	80509991	80527942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_80510055_80522496_80522963_80527228
Isoform_13751_35	chr12	+	3188	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	120	2	-5	-2	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAGTGATTGTAAATG	2783	False	NA	20	True	AATAAA	-17	NA	80509988	80544894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
Isoform_13752_3	chr12	+	3906	16	FSM	ENSMUSG00000021130.9	ENSMUST00000219993.2	4222	16	316	0	-209	0	multi-exon	FALSE	canonical	2	6	junction_1	5.44630353746669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTGATGCCTTTA	NA	False	NA	3	True	AATAAA	-18	NA	80565366	80650666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80565423_80565829_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_13753_6	chr12	+	3866	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	50	6	50	0	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTGATGCCTTTA	NA	False	NA	3	True	AATAAA	-18	NA	80565813	80650666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_13754_4	chr12	+	3959	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	-43	6	-43	0	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTGATGCCTTTA	NA	False	NA	3	True	AATAAA	-18	NA	80565720	80650666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
Isoform_13755_4	chr12	+	2435	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-284	4	0	-4	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAATACTGACTCTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	80690999	80725124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
Isoform_13756_19	chr12	+	2280	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	-18	-1306	-18	2	multi-exon	FALSE	canonical	3	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTTTCCTTTGTTTT	NA	False	NA	6	True	CATAAA	-7	NA	80768487	80770990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80768870_80769092
Isoform_13758_3	chr12	+	5024	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	55	-2952	6	-10	multi-exon	FALSE	canonical	1	6	junction_2	21.4689698557399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGCAGATGTGAGATGT	3465	False	NA	7	True	AATAAA	-9	NA	80837338	80927599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
Isoform_13759_26	chr12	+	4968	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	7	2	7	-2	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3466	False	NA	15	True	AATAAA	-17	NA	80837339	80927607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
Isoform_13760_7	chr12	+	1486	8	NIC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	3	3	intron_retention	FALSE	canonical	3	289	junction_7	734.182927769756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992310	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_13764_44	chr12	+	1483	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110352.10	1491	8	5	3	3	3	multi-exon	FALSE	canonical	3	307	junction_1	564.545762863691	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992310	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_13769_33	chr12	+	1490	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	5	3	3	3	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992310	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_13774_165	chr12	+	1487	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	33	7	3	3	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992310	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_13780_17	chr12	+	2723	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	1278	junction_1	250.508150233347	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992310	80997281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
Isoform_13785_13	chr12	+	1619	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	289	junction_7	680.802857376675	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992307	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
Isoform_13786_82	chr12	+	1613	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-48	3	3	3	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTGGTCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80992310	80997274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
Isoform_1379_185	chr10	-	2873	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	-9	82	1	12	multi-exon	FALSE	canonical	3	359	junction_12	261.05737035618	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269480	80245429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13790_8	chr12	+	2840	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	3	1	intron_retention	FALSE	canonical	3	562	junction_1	513.606096363957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992310	80997272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
Isoform_13791_13	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_13792_4	chr12	+	3488	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.2027933456368	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	81073584	81233185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214282_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_13793_96	chr12	+	3463	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-20	-4	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_13796_17	chr12	+	3461	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.4872338976081	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214282_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
Isoform_13799_9	chr12	+	2030	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157047	-1	157047	1	3prime_fragment	FALSE	canonical	3	175	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	81230648	81233185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_81230816_81231322
Isoform_138_3	ERCC-00143	+	762	1	FSM	ERCC-00143A	DQ668362	767	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	4	766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00143_+_0_800
Isoform_13800_11	chr12	+	2204	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-114	-48	6	48	multi-exon	FALSE	canonical	3	20	junction_1	7	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACAATCTCATTTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	81678028	81711763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_81678576_81707339_81707523_81710289
Isoform_13801_3	chr12	+	6132	24	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	21.8092781282731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATGTCTTTATTTT	NA	False	NA	19	True	NA	NA	NA	82216250	82497046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
Isoform_13802_126	chr12	+	1990	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	94	-76	-74	71	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567333	83588765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13803_30	chr12	+	2038	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	46	-76	46	71	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567285	83588765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13804_163	chr12	+	1915	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	94	-1	-74	1	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567333	83588690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13807_9	chr12	+	2149	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	-67	-74	-67	69	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	14	True	AATAAA	-27	NA	83567172	83588763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13808_22	chr12	+	1888	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-50	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567357	83588690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13809_16	chr12	+	1963	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-50	71	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTACTTCTTTGC	NA	False	NA	16	True	AATAAA	-29	NA	83567357	83588765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_1381_54	chr10	-	2952	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	-38	32	-28	1	multi-exon	FALSE	canonical	3	359	junction_12	261.05737035618	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269509	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13811_8	chr12	+	1960	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTTTGCCAAAG	NA	False	NA	11	True	NA	NA	NA	83567285	83588690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
Isoform_13816_3	chr12	+	1274	12	NNC	ENSMUSG00000010608.16	novel	1116	11	NA	NA	10	1684	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	158.885009616992	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATGAGCTTCTGTTT	3996	False	NA	NA	False	NA	NA	NA	83679040	83708042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980
Isoform_13820_8	chr12	+	1118	10	NIC	ENSMUSG00000010608.16	novel	1116	11	NA	NA	-9	1094	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	135.120613700921	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTATTCTTGATTTTTCA	3972	False	NA	NA	False	NA	NA	NA	83679016	83707452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368
Isoform_13825_3	chr12	+	1174	9	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	7	22309	2	1230	5prime_fragment	FALSE	canonical	3	212	junction_1	75.2462623656484	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAGAACAGAAGACTA	3988	False	NA	NA	False	NA	NA	NA	83679032	83707588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368
Isoform_13827_3	chr12	+	1195	10	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-10	19005	-10	119	5prime_fragment	FALSE	canonical	3	212	junction_1	85.0034131486117	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAAAGAACGGGAGC	3971	False	NA	41	True	NA	NA	NA	83679015	83710892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752
Isoform_13829_3	chr12	+	1835	9	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	25544	-129	5207	129	3prime_fragment	FALSE	canonical	3	467	junction_5	56.5663327430725	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGGTGGGCTCCC	NA	False	NA	9	True	TATAAA	-13	NA	83714956	83728923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
Isoform_13830_336	chr12	+	2676	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	13	1	-7	-1	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCTCTGTCCTGGCTG	3358	False	NA	8	True	ATTAAA	-19	NA	83734938	83781868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
Isoform_13832_5	chr12	+	5996	13	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	-3	3246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.2504185682942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTGCTTGTTTTCTTCC	3362	False	NA	2	True	AATAAA	-15	NA	83734942	83785219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689_83783758_83783784
Isoform_13834_4	chr12	+	2524	11	NIC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	97.7331059569888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCTCTGTCCTGGCTG	3354	False	NA	8	True	ATTAAA	-19	NA	83734934	83781868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_83735068_83746374_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
Isoform_13835_11	chr12	+	2362	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	-165	-1	-165	1	multi-exon	FALSE	canonical	3	74	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATGTTGTCCTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	84034469	84040648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84035256_84037267_84037471_84039275
Isoform_13839_61	chr12	+	1560	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	6	706	6	1	multi-exon	FALSE	canonical	3	130	junction_1	2	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACACAGTTGTGTAACC	2825	False	NA	2	True	AATAAA	-13	NA	84056269	84064439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84056741_84061152_84061356_84063553
Isoform_13841_3	chr12	+	709	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	-26	5044	-26	16	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGGAGCAGAGT	9886	False	NA	NA	False	AATAGA	-27	NA	84161113	84185247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
Isoform_13842_6	chr12	+	1180	9	ISM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	129	4837	-4	1042	5prime_fragment	FALSE	canonical	3	204	junction_5	23.3492505233037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGAGTGGGTTTTCT	NA	False	NA	12	True	AATAAA	-24	NA	84332134	84357769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692
Isoform_13843_41	chr12	+	3002	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	163	3	-4	-3	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGACCACTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84332168	84362603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_13844_7	chr12	+	2107	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	83	978	-50	0	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTGAGAAGCAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	84332088	84361628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_13845_46	chr12	+	1336	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	110	1722	-23	8	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTAGTGTGATAATAT	NA	False	NA	36	True	TTTAAA	-27	NA	84332115	84360884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
Isoform_13846_4	chr12	+	3029	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.043510443362	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATGACCACTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	84332140	84362604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355120_84355207_84357692_84357733_84360710
Isoform_13848_4	chr12	+	2536	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	77.4279234729521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTTTGGCTCTTGTT	1849	False	NA	9	True	AATAAA	-14	NA	84363891	84390495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84363949_84366628_84366836_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13849_4	chr12	+	2533	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	75.9171240381393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTTTGGCTCTTGTTT	1849	False	NA	10	True	AATAAA	-15	NA	84363891	84390496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
Isoform_1385_294	chr10	-	2874	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-21	-14	1	14	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269476	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13850_281	chr12	+	2332	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	266	-1	0	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13851_18	chr12	+	2609	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	-11	-1	-11	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1572	False	NA	12	True	AATAAA	-17	NA	84363614	84390498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13852_7	chr12	+	2300	12	FSM	ENSMUSG00000042472.12	ENSMUST00000222606.2	2284	12	-12	-4	0	1	multi-exon	FALSE	canonical	3	6	junction_3	61.2357590123466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372376_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13854_16	chr12	+	2036	10	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.7317782101372	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1829	False	NA	12	True	AATAAA	-17	NA	84363871	84390498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13855_14	chr12	+	2370	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1846	False	NA	12	True	AATAAA	-17	NA	84363888	84390498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
Isoform_13857_265	chr12	+	1528	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	73	1	0	-1	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCTTTTCCTCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	84408814	84420569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_13858_3	chr12	+	1457	11	NIC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	69.5125887879311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGTGTCTCTTTTCCT	NA	False	NA	10	True	AATAAA	-10	NA	84408816	84420563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_13859_4	chr12	+	2064	11	FSM	ENSMUSG00000021235.14	ENSMUST00000150391.8	2056	11	-2	-6	0	2	multi-exon	FALSE	canonical	3	205	junction_5	17.0188131196038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTTTTCCTCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84408814	84420568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_1386_99	chr10	-	2923	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-22	-62	0	1	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269477	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13860_5	chr12	+	1872	11	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	20	junction_4	64.7216347135948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGTGTCTCTTTTCCT	NA	False	NA	10	True	AATAAA	-10	NA	84408816	84420563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84409012_84413658_84413794_84414916_84415484_84417029_84417129_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
Isoform_13861_79	chr12	+	2180	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	88	2	88	-2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	3	True	AATAAA	-14	NA	84498283	84578345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
Isoform_13862_12	chr12	+	2136	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	False	NA	5	True	AATAAA	-16	NA	84498283	84578347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
Isoform_13864_8	chr12	+	3155	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	-62	5	-62	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGCCTGTGGCCTCCGG	NA	False	NA	NA	False	AATAAA	-17	NA	84687730	84698224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84687912_84695250
Isoform_13865_12	chr12	+	1601	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-12	-746	1	-3	multi-exon	FALSE	canonical	3	319	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820052	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820348
Isoform_13866_90	chr12	+	853	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	27	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
Isoform_13867_21	chr12	+	737	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-47	-205	0	-3	multi-exon	FALSE	canonical	3	134	junction_2	92.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820348_84820452_84821316
Isoform_13868_6	chr12	+	1581	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	1	6	0	-3	multi-exon	FALSE	canonical	3	86	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820369
Isoform_13869_11	chr12	+	832	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	-27	-78	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
Isoform_13870_5	chr12	+	721	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222449.2	374	3	-5	-342	-4	-3	multi-exon	FALSE	canonical	3	86	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820046	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820146_84820369_84820452_84821316
Isoform_13872_690	chr12	+	709	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	34	6	34	0	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTATGTTGTCTCAA	4663	False	NA	17	True	ATTAAA	-19	NA	85017704	85030071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
Isoform_13875_535	chr12	+	2735	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	25	4	0	-4	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGCTCCGGGATCTGT	NA	False	NA	16	True	ATTAAA	-16	NA	85157631	85180858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_13876_6	chr12	+	3507	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	16	-759	-9	2	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGGAGTAGCTGTTC	NA	False	NA	NA	False	TTTAAA	-12	NA	85157622	85181621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_13877_11	chr12	+	2847	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	-4	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGCTCCGGGATCTGT	NA	False	NA	16	True	ATTAAA	-16	NA	85157631	85180858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_13878_6	chr12	+	2698	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	93.3796095477484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACAGGGCTCCGGGATC	NA	False	NA	13	True	ATTAAA	-13	NA	85157631	85180855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_85157734_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
Isoform_13882_8	chr12	+	1432	8	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	119.526446565484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266283	85273267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_13884_349	chr12	+	1445	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	29	131	-3	4	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTTTATTGTTCTGAG	NA	False	NA	35	True	AATAAA	-20	NA	85266283	85273271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_13885_6	chr12	+	1292	7	FSM	ENSMUSG00000004788.12	ENSMUST00000136495.3	957	7	8	-343	6	0	multi-exon	FALSE	canonical	0	0	junction_5	128.430266422418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266294	85273267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85271328_85271396_85272776
Isoform_13888_7	chr12	+	1537	7	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	336	junction_6	13.6188186793944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266284	85273267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
Isoform_13889_4	chr12	+	1969	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	97	2416	97	-4	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACCATGGTTTGTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	85335461	85343716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85335560_85336325_85337656_85343175
Isoform_13890_11	chr12	+	2109	4	FSM	ENSMUSG00000021250.14	ENSMUST00000021674.7	2108	4	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_3	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCTTGCTCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	85520663	85524048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85520955_85521708_85521961_85522365_85522474_85522590
Isoform_13892_3	chr12	+	1800	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	-160	5	-160	-5	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	6090	False	NA	29	True	AGTAAA	-15	NA	85645640	85686647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
Isoform_13893_4	chr12	+	1526	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	119	0	119	0	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6369	False	NA	34	True	AGTAAA	-20	NA	85645919	85686652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
Isoform_13894_6	chr12	+	1662	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-20	1	-20	-1	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTCGAGTGGTGTCT	6619	False	NA	33	True	AGTAAA	-19	NA	85646169	85686651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
Isoform_13895_94	chr12	+	3403	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	27	5	27	-5	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCTGCCTCATCATT	NA	False	NA	NA	False	AATAAA	-9	NA	85793339	85860354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
Isoform_13898_5	chr12	+	4858	34	FSM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	221	2	-37	-1	multi-exon	TRUE	canonical	3	18	junction_33	8.97020883060403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871704	86100532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
Isoform_13899_3	chr12	+	4712	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	-15	-550	-14	-1	multi-exon	FALSE	canonical	3	15	junction_32	9.07864940395872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871727	86100532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
Isoform_139_40	ERCC-00144	+	520	1	FSM	ERCC-00144A	DQ854995	521	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00144_+_0_500
Isoform_13900_96	chr12	+	802	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-19	0	5	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86129341	86209233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
Isoform_13901_5	chr12	+	2956	2	ISM	ENSMUSG00000097543.2	ENSMUST00000181667.2	3160	5	20	22223	20	-22223	intron_retention	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTAGTCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86216134	86219653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_86216220_86216782
Isoform_13902_9	chr12	+	2167	6	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	2	25084	2	2947	5prime_fragment	FALSE	canonical	3	56	junction_1	5.62138772902208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAAACTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	86288650	86313060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955
Isoform_13904_6	chr12	+	4336	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	19	0	2	0	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTTATGATTGAGGTC	NA	False	NA	3	True	AATAAA	-14	NA	86288650	86338558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
Isoform_13906_5	chr12	+	4255	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-6	-420	-6	6	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATTGAGGTCTGTTAT	NA	False	NA	9	True	AATAAA	-20	NA	86288642	86338564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
Isoform_13909_353	chr12	+	3902	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	-1	-2557	-1	-3	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516889	86568396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
Isoform_1391_161	chr10	-	2879	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	-23	-14	-1	14	multi-exon	FALSE	canonical	3	359	junction_12	305.080706788091	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269478	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13913_3	chr12	+	4132	5	FSM	ENSMUSG00000034157.13	ENSMUST00000190588.2	573	5	-77	-3482	-5	3	multi-exon	FALSE	canonical	1	1	junction_2	47.8767950055139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTATTTGCTTTGTAA	NA	False	NA	10	True	AATAAA	-22	NA	86994186	87012139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86994274_86999517_86999706_87006501_87006603_87007045_87007216_87008553
Isoform_13915_48	chr12	+	4083	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	11	4	11	-4	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTTGGTCTATTTGC	NA	False	NA	3	True	AATAAA	-15	NA	86994127	87012132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
Isoform_13918_182	chr12	+	1664	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-9	1	-9	-1	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87194482	87211496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_13921_3	chr12	+	1831	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-176	1	-176	-1	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87194315	87211496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_13922_9	chr12	+	2960	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87194485	87211496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
Isoform_13926_1395	chr12	+	1342	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	36	-1	24	1	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	1395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313507	87320754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
Isoform_13934_773	chr12	+	397	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	16	2288	0	-2	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	773	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490681	87496688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
Isoform_13939_58	chr12	+	2177	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-13	-6	-13	1	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTCTCAATCATTG	NA	False	NA	16	True	AATAAA	-29	NA	88327310	88428495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_13940_31	chr12	+	2322	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-64	-5	30	1	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTCTCAATCATTG	NA	False	NA	16	True	AATAAA	-29	NA	88327353	88428495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_13942_3	chr12	+	2158	10	NIC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	31	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	25.9443849630534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	12	True	AATAAA	-25	NA	88327354	88428491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_13943_16	chr12	+	2272	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	-70	-3	4	1	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	12	True	AATAAA	-25	NA	88327588	88428491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
Isoform_13945_80	chr12	+	2043	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	7	2	2	1	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACATATTTATTATT	NA	False	NA	15	True	NA	NA	NA	98594422	98636072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
Isoform_13948_25	chr12	+	1950	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-39	2	1	-2	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACACCACATATTTATT	NA	False	NA	12	True	NA	NA	NA	98594416	98636069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
Isoform_1395_72	chr10	-	2927	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269478	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13952_233	chr12	+	2611	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-2	905	-2	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713245	98753107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13953_186	chr12	+	2639	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-30	905	-5	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713217	98753107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13955_26	chr12	+	3550	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-19	-17	2	17	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713228	98754029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13957_64	chr12	+	3508	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	1	5	1	1	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCTGTGTTTAATAA	NA	False	NA	NA	False	AATAAA	-11	NA	98713248	98754007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_1396_286	chr10	-	2879	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-1	14	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269478	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13962_15	chr12	+	2626	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713218	98753107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
Isoform_13963_19	chr12	+	3171	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	-28	3	-28	3	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGTGTTTAATAATG	NA	False	NA	NA	False	AATAAA	-13	NA	98713194	98754009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13964_81	chr12	+	2221	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	20	905	1	0	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713242	98753107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13966_29	chr12	+	3143	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	23	-20	-2	20	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTTCTACTGTGGT	NA	False	NA	NA	False	AATAAA	-36	NA	98713245	98754032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_1397_44	chr10	-	2802	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-28	-76	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCCTTCCGTGTC	NA	False	NA	-2	True	TTTAAA	-19	NA	80269509	80245535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_13973_15	chr12	+	2177	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	-30	899	-11	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713211	98753107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13975_14	chr12	+	2500	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713239	98753105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
Isoform_13978_14	chr12	+	2235	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	38	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTTCACTTTTCAC	NA	False	NA	NA	False	AATAAA	-11	NA	98886870	98949492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
Isoform_13980_11	chr12	+	2299	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	-26	-1	-26	1	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTTCACTTTTCAC	NA	False	NA	NA	False	AATAAA	-11	NA	98886806	98949492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
Isoform_13981_5	chr12	+	2292	17	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	153.9589915976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTACAGGCCTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	99850778	99921474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_99850812_99852736_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
Isoform_13984_23	chr12	+	1848	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	3	27	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTCCACAGAGGTGTG	NA	False	NA	30	True	NA	NA	NA	99850778	99885590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
Isoform_13985_5	chr12	+	2019	15	ISM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-25	9656	-5	8201	5prime_fragment	FALSE	canonical	3	362	junction_1	44.7195341511277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTCATGTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	99850770	99911822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
Isoform_13986_261	chr12	+	2051	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-19	4	1	1	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTACAGGCCTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	99850776	99921474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
Isoform_13990_874	chr12	+	1532	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	19	40	19	-40	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	874	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGTAATGAGTACCATG	3992	False	NA	18	True	AATAAA	-24	NA	100076431	100089624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
Isoform_14002_796	chr12	+	1521	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	2502	-2	817	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGTGTTAAATGCTTT	9257	False	NA	27	True	AATAAA	-16	NA	100165785	100173571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
Isoform_1401_125	chr10	-	2878	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105342.8	2928	19	3	47	3	14	multi-exon	FALSE	canonical	3	359	junction_12	316.935193165206	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269474	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_14014_8	chr12	+	2976	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	54	265	16	-3	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAATCTTTAGTATG	NA	False	NA	NA	False	AATAAA	-12	NA	100745369	100838604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
Isoform_14022_4	chr12	+	3604	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-15	2143	-15	-2143	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCTGAACTTGTTTTT	NA	False	NA	3	True	ATTAAA	-15	NA	101942231	101970540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
Isoform_14026_3	chr12	+	933	2	ISM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	130	25074	73	-24751	5prime_fragment	FALSE	canonical	3	153	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	102435523	102439090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_102435623_102438256
Isoform_14028_21	chr12	+	2947	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-10	-110	-10	108	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	102435383	102464274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_14029_51	chr12	+	2820	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	8	-1	8	1	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGTGCTTTATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	102435401	102464165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_14031_21	chr12	+	2803	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	140	-116	83	114	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAATAACGA	NA	False	NA	NA	False	AATAAA	-19	NA	102435533	102464280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
Isoform_14032_39	chr12	+	1875	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	7	1	7	-1	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTTGATTTATTTTC	NA	False	NA	23	True	AATAAA	-17	NA	102521234	102531286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
Isoform_14034_28	chr12	+	1212	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-2	2157	-2	-2157	multi-exon	FALSE	canonical	3	165	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGCTTGCTTTAAAAA	NA	False	NA	4	True	CATAAA	-19	NA	102710018	102711663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102710426_102710858
Isoform_14035_3	chr12	+	1518	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-19	1868	-19	-1868	multi-exon	FALSE	canonical	3	165	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGCTTTTTGTACTT	NA	False	NA	NA	False	NA	NA	NA	102710001	102711952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102710426_102710858
Isoform_14037_5	chr12	+	1103	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-39	2303	-39	-2303	multi-exon	FALSE	canonical	3	165	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAATAAGCGCCTGAA	NA	False	NA	NA	False	AGTAAA	-30	NA	102709981	102711517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102710426_102710858
Isoform_1404_85	chr10	-	2636	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	3	14	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCGTCATATTTCATG	NA	False	NA	0	True	TATAAA	-28	NA	80269474	80245427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_14041_592	chr12	+	3220	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	36	5	36	-5	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGCTTTTCTGATT	NA	False	NA	28	True	ATTAAA	-9	NA	102724261	102743961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
Isoform_14042_192	chr12	+	3247	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	9	5	9	-5	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGCTTTTCTGATT	NA	False	NA	28	True	ATTAAA	-9	NA	102724234	102743961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
Isoform_14053_73	chr12	+	2781	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	5	5	5	1	multi-exon	FALSE	canonical	3	84	junction_1	8.60232526704263	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTCAGTCTGGCTT	8181	False	NA	NA	False	ATTAAA	-11	NA	103354961	103372599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
Isoform_14054_14	chr12	+	2674	7	NNC	ENSMUSG00000021203.16	novel	2791	6	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	65	junction_6	12.7638813323639	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTCAGTCTGGCTT	8267	False	NA	NA	False	ATTAAA	-11	NA	103355047	103372599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484_103372384_103372404
Isoform_14056_9	chr12	+	3113	5	FSM	ENSMUSG00000021203.16	ENSMUST00000141055.2	3055	5	-63	5	5	1	multi-exon	FALSE	canonical	3	84	junction_1	9.35414346693485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTCAGTCTGGCTT	8181	False	NA	NA	False	ATTAAA	-11	NA	103354961	103372599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484
Isoform_14057_11	chr12	+	2757	6	NIC	ENSMUSG00000021203.16	novel	424	4	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	32.5047688808888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTCAGTCTGGCTT	8440	False	NA	NA	False	ATTAAA	-11	NA	103355220	103372599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
Isoform_14058_4	chr12	+	1013	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	-32	-4	15	4	multi-exon	FALSE	canonical	1	4	junction_4	6.23832242407097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTTCCCCTTTCTGTG	6602	False	NA	9	True	AATAAA	-23	NA	103400485	103406502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
Isoform_14059_8	chr12	+	825	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	62	2	-11	-2	multi-exon	FALSE	canonical	3	10	junction_3	3.54400902933387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCATTGTTCCCCTT	6649	False	NA	3	True	AATAAA	-17	NA	103400532	103406496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
Isoform_14060_102	chr12	+	2052	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-9	737	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGAGTGTTCACAGAG	NA	False	NA	11	True	AATAAA	-17	NA	104214154	104220665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_14061_4	chr12	+	2140	6	NNC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-6	738	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.5278810990231	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGTGTTCACAGAGC	NA	False	NA	12	True	AATAAA	-18	NA	104214157	104220666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_104214232_104215408_104215499_104216398_104217017_104217730_104218005_104218943_104219095_104219733
Isoform_14062_5	chr12	+	2977	2	ISM	ENSMUSG00000079014.5	ENSMUST00000109958.3	2200	6	-6	2193	-6	1443	intron_retention	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTTATCCTT	NA	False	NA	NA	False	ATTAAA	-6	NA	104229374	104233438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_104229474_104230560
Isoform_14063_83	chr12	+	889	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-14	2050	-12	117	multi-exon	FALSE	canonical	3	651	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6346	False	NA	14	True	ATTAAA	-14	NA	104998934	105007115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_104999242_105006533
Isoform_14064_10	chr12	+	979	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-46	1992	-44	175	multi-exon	FALSE	canonical	3	651	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTGTGTTTTCT	6314	False	NA	27	True	ATTAAA	-39	NA	104998902	105007173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_104999242_105006533
Isoform_14065_61	chr12	+	923	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-48	2050	-46	117	multi-exon	FALSE	canonical	3	651	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6312	False	NA	14	True	ATTAAA	-14	NA	104998900	105007115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_104999242_105006533
Isoform_14066_15	chr12	+	943	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-14	1996	-12	171	multi-exon	FALSE	canonical	3	651	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCTTTTCTTTGTGTT	6346	False	NA	23	True	ATTAAA	-35	NA	104998934	105007169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_104999242_105006533
Isoform_14069_4	chr12	+	1227	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	233	1822	-166	-1820	multi-exon	FALSE	canonical	3	14	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTGGAGAAGCACTT	NA	False	NA	32	True	AATAAA	-26	NA	105303085	105348369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105303217_105303488_105303819_105347603
Isoform_14070_4	chr12	+	1119	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	209	1825	209	-1825	intron_retention	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAAATATTTGGAGAAG	NA	False	NA	27	True	AATAAA	-21	NA	105303460	105348364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_105303819_105347603
Isoform_14073_6	chr12	+	512	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	555	-3	0	3	multi-exon	FALSE	canonical	3	132	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGGTGTAAATACAT	NA	False	NA	NA	False	AATAAA	-18	NA	105651642	105665413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105651718_105664976
Isoform_14075_21	chr12	+	1672	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-26	1074	-26	-1074	multi-exon	FALSE	canonical	3	113	junction_2	9.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACCTGGCTCTGTT	NA	False	NA	37	True	AATAAA	-41	NA	105651616	105668208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105651718_105664976_105665236_105666896
Isoform_14076_9	chr12	+	1638	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55402	5	16103	-5	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAAATTGGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	105727636	105748701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
Isoform_14077_4	chr12	+	1569	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16101	-7	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAATTGGTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	105727634	105748699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
Isoform_14079_328	chr12	+	1086	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-54	1	-1	-1	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGTCTTATTTCTGTG	NA	False	NA	16	True	AATAAA	-19	NA	105750961	105775967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
Isoform_14081_12	chr12	+	1410	10	ISM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	-30	2663	-1	-6	5prime_fragment	FALSE	canonical	3	944	junction_9	257.973776062224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCCCTGTATATTTT	NA	False	NA	NA	False	AATAAA	-8	NA	105750961	105777665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295
Isoform_14085_14	chr12	+	3423	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	4	-584	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTAAATTATTG	NA	False	NA	37	True	AATAAA	-31	NA	105750978	105802533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
Isoform_14086_110	chr12	+	4490	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	25	-135	3	-2	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCATAGTTGGCTGGTT	NA	False	NA	10	True	AATAAA	-16	NA	105750977	105805201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
Isoform_14092_12	chr12	+	4443	21	FSM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-169	-1669	-1	-2	multi-exon	FALSE	canonical	3	84	junction_19	453.97952597006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCATAGTTGGCTGGTT	NA	False	NA	10	True	AATAAA	-16	NA	105750961	105805201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
Isoform_14098_4	chr12	+	1969	2	FSM	ENSMUSG00000113835.2	ENSMUST00000220934.2	2076	2	-43	150	-43	-150	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAATAAATTTCTTGT	3308	False	NA	NA	False	NA	NA	NA	105866056	105868259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105866201_105866434
Isoform_1410_65	chr10	-	2680	18	NIC	ENSMUSG00000020167.15	novel	2826	19	NA	NA	2	1	combination_of_known_splicesites	TRUE	canonical	3	76	junction_1	308.377436915569	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTGTTGATCTA	NA	False	NA	-32	True	ATTAAA	-11	NA	80269467	80245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
Isoform_14101_20	chr12	+	1567	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-34	209	-1	0	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976540	106041459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
Isoform_14102_3	chr12	+	1759	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-29	12	4	-12	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976545	106041656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
Isoform_14103_68	chr12	+	1481	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	4	2226	4	0	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976554	106041459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_14104_9	chr12	+	1704	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-22	2029	-13	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976528	106041656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_14106_19	chr12	+	1678	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	4	2029	4	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976554	106041656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_14107_72	chr12	+	1421	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	68	20	4	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976554	106041459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14108_23	chr12	+	1449	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	40	20	-15	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976526	106041459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14109_14	chr12	+	1621	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	65	-177	1	-12	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976551	106041656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14110_3	chr12	+	3624	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	84	-2199	-4	-7	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTGTTTTTGTTTAT	NA	False	NA	10	True	NA	NA	NA	105976570	106043678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14111_3	chr12	+	1707	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_12	325.723691906787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGGTAATTTATAAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	105976557	106041460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037672_106037901_106039877_106039938_106041265
Isoform_14112_4	chr12	+	1135	10	NIC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	320.534314720874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976540	106041459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_14113_6	chr12	+	1068	9	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGAAGGGTAATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	105976543	106041455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14115_4	chr12	+	3846	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	304	10	42	-10	multi-exon	TRUE	canonical	1	1	junction_11	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTGACTTTCTTATT	NA	False	NA	NA	False	AATAAA	-4	NA	108389378	108505813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
Isoform_14116_8	chr12	+	1930	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	247	3	247	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108521229	108654772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
Isoform_14120_46	chr12	+	2533	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	5	3640	5	944	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGATTACGGCAGAAA	NA	False	NA	5	True	AATAAA	-13	NA	108758903	108782434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_14121_27	chr12	+	2659	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	3	3516	3	1068	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACTCAGTGACAGTG	NA	False	NA	15	True	AATAAA	-20	NA	108758901	108782558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_14123_7	chr12	+	2404	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	-22	3796	-22	788	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCAAAAAATACTGCCAG	NA	False	NA	NA	False	TTTAAA	-22	NA	108758876	108782278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
Isoform_14128_4	chr12	+	2813	8	NIC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.1054917156728	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	4873	False	NA	NA	False	NA	NA	NA	108860220	108994372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_108860257_108862817_108862986_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_14129_13	chr12	+	2652	7	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	19.6694913225759	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	4866	False	NA	NA	False	NA	NA	NA	108860213	108994372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_108860257_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_14130_4	chr12	+	2767	7	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	2583	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.6713610367747	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	7478	False	NA	NA	False	NA	NA	NA	108862825	108994372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_108862984_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
Isoform_14133_14	chr12	+	1633	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	-10	80	-10	2	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAGTTAAAGAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	109419370	109426546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
Isoform_14134_3	chr12	+	1701	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	-81	83	-81	-1	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAATGAGTTAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	109419299	109426543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
Isoform_14136_371	chr12	+	1501	3	FSM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	187	junction_2	159.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109506881	109511203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109506983_109509582_109509689_109509909
Isoform_14138_60	chr12	+	1861	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14141_202	chr12	+	1767	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14142_86	chr12	+	1686	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14145_516	chr12	+	1545	3	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	26952	-2	1	intron_retention	FALSE	canonical	3	281	junction_2	112.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109506881	109511203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_109506983_109509582_109509733_109509909
Isoform_14149_99	chr12	+	1905	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	-3	-2	2	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14152_22	chr12	+	1824	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	164.408361633464	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14154_291	chr12	+	1811	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14156_96	chr12	+	1730	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGATGGGTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	109506881	109538158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
Isoform_14164_4	chr12	+	2362	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	183.218039504848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAAAAGTGTGAAGTAC	2867	False	NA	NA	False	NA	NA	NA	109612565	109628141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109613186_109615587_109615677_109616505_109616590_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_14165_3	chr12	+	2358	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1256	6	2	1	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2867	False	NA	NA	False	NA	NA	NA	109612565	109628144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
Isoform_14166_24	chr12	+	2367	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	2	-1	2	1	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2867	False	NA	NA	False	NA	NA	NA	109612565	109628144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_14167_3	chr12	+	2313	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	206.409756683934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
Isoform_14168_4	chr12	+	3211	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
Isoform_14169_5	chr12	+	3221	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	549	junction_7	35.1002092779804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_1417_75	chr10	-	4502	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	13	735	13	4	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9434	False	NA	-1	True	AATAAA	-18	NA	80397381	80377493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_14170_22	chr12	+	1915	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	431	6	2	1	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	1332	False	NA	NA	False	NA	NA	NA	109617103	109628144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
Isoform_14171_3	chr12	+	559	2	FSM	ENSMUSG00000097391.9	ENSMUST00000182300.2	694	2	134	1	134	-1	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTTGCGTGTCTGTAT	4923	False	NA	20	True	AATAAA	-20	NA	109714531	109715891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109714728_109715528
Isoform_14175_106	chr12	+	2290	13	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	278.794428447437	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTATTTTCCTATG	4962	False	NA	16	True	AATAAA	-18	NA	110452213	110538124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537786_110537822
Isoform_14176_29	chr12	+	2338	13	NNC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	278.794428447437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	4912	False	NA	14	True	AATAAA	-16	NA	110452163	110538122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537786_110537822
Isoform_14177_36	chr12	+	1612	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	-21	776	-21	1	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTCTTGTATAAGTAC	4899	False	NA	14	True	AATAAA	-19	NA	110452150	110537346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_14183_7	chr12	+	4062	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	46	0	46	0	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4967	False	NA	3	True	AATAAA	-17	NA	110452218	110549496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
Isoform_14186_3	chr12	+	5740	36	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	41762	21	2690	-21	3prime_fragment	TRUE	canonical	3	294	junction_3	105.516246935469	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	295	False	NA	18	True	AATAAA	-19	NA	110609647	110633358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_14187_4	chr12	+	4179	26	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	52808	23	98	-23	3prime_fragment	FALSE	canonical	3	354	junction_6	90.1456066594485	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCGCCTCTTGCCGCTC	5225	False	NA	16	True	AATAAA	-17	NA	110620693	110633356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_14188_3	chr12	+	4287	26	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	52697	26	-13	-26	3prime_fragment	FALSE	canonical	3	354	junction_6	90.1456066594485	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCTCCCGCCTCTTGCCG	5114	False	NA	13	True	AATAAA	-14	NA	110620582	110633353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_14189_6	chr12	+	3308	21	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	55708	16	755	-16	3prime_fragment	FALSE	canonical	3	354	junction_1	86.661107193481	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCCGCTCTGCTCAG	8125	False	NA	23	True	AATAAA	-24	NA	110623593	110633363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_14197_6	chr12	+	2484	15	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	57637	22	-3	-22	3prime_fragment	FALSE	canonical	3	440	junction_2	73.4744506475495	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	NA	False	NA	17	True	AATAAA	-18	NA	110625522	110633357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
Isoform_142_365	ERCC-00145	+	1023	1	FSM	ERCC-00145A	DQ875386	1024	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00145_+_0_1000
Isoform_1420_6	chr10	-	4527	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9433	False	NA	-1	True	AATAAA	-18	NA	80397382	80377493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_14202_148	chr12	+	2351	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	28	5	2	-5	multi-exon	FALSE	canonical	3	142	junction_2	4	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAGTTTGTAGAACT	5374	False	NA	14	True	AATAAA	-13	NA	110704453	110761457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110704712_110745729_110745913_110759547
Isoform_14204_13	chr12	+	2459	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	-80	5	-32	-5	multi-exon	FALSE	canonical	3	142	junction_2	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAGTTTGTAGAACT	5266	False	NA	14	True	AATAAA	-13	NA	110704345	110761457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110704712_110745729_110745913_110759547
Isoform_14206_5	chr12	+	3396	9	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	7	-23	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	24.320451784455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTAAAAAAGAAAGTCAT	NA	False	NA	-10	True	NA	NA	NA	110816719	110836407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835548_110835590_110835751_110835776
Isoform_14207_3	chr12	+	2646	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-27	-234	0	234	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	110816712	110835581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
Isoform_14208_8	chr12	+	2650	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	26	2	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTCTCTGTTTTAATAA	NA	False	NA	20	True	AATATA	-27	NA	111132829	111228996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_1421_4	chr10	-	4578	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	20	4	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9441	False	NA	-1	True	AATAAA	-18	NA	80397374	80377493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
Isoform_14211_17	chr12	+	2581	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-110	4589	-17	-1	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGTCTCTGTTTTAA	NA	False	NA	17	True	AATATA	-24	NA	111132786	111228993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
Isoform_14215_4	chr12	+	3563	12	FSM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	192	7	-1	-7	multi-exon	FALSE	canonical	0	0	junction_1	2.24896670488236	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTGTGGAGTGGTT	557	False	NA	NA	False	TATAAA	-11	NA	111409094	111421445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111409118_111411362_111411718_111411940_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
Isoform_14223_46	chr12	+	3681	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	200	169	0	-5	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAATTTCTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	111504649	111513017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14225_40	chr12	+	2071	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	155	1824	-26	5	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGGCTATGAATGGC	NA	False	NA	23	True	AATAAA	-24	NA	111504604	111511362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14226_88	chr12	+	2026	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	200	1824	0	5	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGGCTATGAATGGC	NA	False	NA	23	True	AATAAA	-24	NA	111504649	111511362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14227_28	chr12	+	2855	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	155	1040	-26	713	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111504604	111512146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14228_61	chr12	+	2810	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	200	1040	0	713	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111504649	111512146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14230_17	chr12	+	3703	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	178	169	-3	-5	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAATTTCTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	111504627	111513017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_1424_220	chr10	-	2762	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-92	4	-92	-4	multi-exon	FALSE	canonical	3	135	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTGCCCTTCTGTCTG	8614	False	NA	-10	True	ATTAAA	-14	NA	80413247	80402961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80405057_80412580
Isoform_14247_16	chr12	+	2112	11	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	226	1827	26	2	3prime_fragment	FALSE	canonical	3	2160	junction_7	92.3556170462847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTGGGCTATGAAT	NA	False	NA	20	True	AATAAA	-21	NA	111504675	111511359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
Isoform_14257_5	chr12	+	3062	13	ISM	ENSMUSG00000007411.17	ENSMUST00000221753.2	2394	18	-558	20759	-30	6430	5prime_fragment	FALSE	canonical	3	404	junction_3	39.6452147876078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCTTCAACATGCCTT	706	False	NA	23	True	AATAAA	-20	NA	111540926	111601290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050
Isoform_14258_126	chr12	+	3396	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-529	-60	-1	-1	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	735	False	NA	NA	False	ATTAAA	-20	NA	111540955	111622654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_1426_50	chr10	-	2798	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-128	4	-128	-4	multi-exon	FALSE	canonical	3	135	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTGCCCTTCTGTCTG	8578	False	NA	-10	True	ATTAAA	-14	NA	80413283	80402961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80405057_80412580
Isoform_14263_17	chr12	+	3378	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-28	-1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	708	False	NA	NA	False	ATTAAA	-20	NA	111540928	111622654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
Isoform_14265_11	chr12	+	3386	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-22	1	-18	-1	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	718	False	NA	NA	False	ATTAAA	-20	NA	111540938	111622654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
Isoform_14267_34	chr12	+	3341	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-18	-2	-18	-1	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	718	False	NA	NA	False	ATTAAA	-20	NA	111540938	111622654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
Isoform_14269_6	chr12	+	3293	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	723	False	NA	NA	False	ATTAAA	-20	NA	111540943	111622654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_1427_3	chr10	-	3087	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-420	7	-420	-7	multi-exon	FALSE	canonical	3	135	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAACCTGCCCTTCTGT	8286	False	NA	-13	True	ATTAAA	-11	NA	80413575	80402964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80405057_80412580
Isoform_14270_9	chr12	+	2897	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-23	120	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCTTGTTTCCAT	713	False	NA	28	True	ATTAAA	-14	NA	111540933	111622248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_14272_4	chr12	+	2801	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-2	122	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	127.415597063311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	734	False	NA	30	True	ATTAAA	-16	NA	111540954	111622250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
Isoform_14273_4	chr12	+	3507	3	FSM	ENSMUSG00000060950.13	ENSMUST00000221089.2	601	3	9	-2915	-2	-2	multi-exon	FALSE	canonical	3	64	junction_1	75.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTGTCTTGTTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	111644547	111650334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111644596_111645036_111645397_111647235
Isoform_14274_56	chr12	+	1985	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTGTCTTGTTCCCAC	NA	False	NA	4	True	AATAAA	-16	NA	111644544	111650335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
Isoform_14275_118	chr12	+	1221	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-5	-765	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTTCCTGGGTTTTGA	NA	False	NA	9	True	NA	NA	NA	111644544	111649571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
Isoform_14276_32	chr12	+	2414	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	18	1	7	-1	multi-exon	FALSE	canonical	3	213	junction_2	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTGTCTTGTTCCCAC	NA	False	NA	4	True	AATAAA	-16	NA	111644556	111650335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111645397_111647235_111647503_111649028
Isoform_14280_11	chr12	+	3084	3	FSM	ENSMUSG00000037787.15	ENSMUST00000162316.2	3107	3	-4	27	2	-27	multi-exon	FALSE	canonical	3	509	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	1562	False	NA	NA	False	NA	NA	NA	111679715	111693522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111679853_111689045_111689244_111690773
Isoform_14281_46	chr12	+	1032	6	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	2	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	203.498009818278	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGAATAAGCCTTCAG	1562	False	NA	NA	False	TTTAAA	-9	NA	111679715	111700662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100_111700622_111700641
Isoform_14284_15	chr12	+	2397	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725315	111761331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
Isoform_14285_9	chr12	+	2433	17	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	5	combination_of_known_splicesites	FALSE	canonical	2	22	junction_14	42.3655502000151	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATGAAAGCCTGTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	111725318	111773150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111761981_111762113_111772441_111772509_111772748
Isoform_14286_94	chr12	+	2380	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	3	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725318	111773148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_14287_5	chr12	+	2441	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	30	-6	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCAAGTGAGTGAGTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	111725312	111773203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_14288_40	chr12	+	2254	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	-7	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	36.2404808050278	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725318	111773153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
Isoform_14289_15	chr12	+	2421	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	44.3616859877245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725318	111761331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
Isoform_1429_7	chr10	-	4584	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	0	2	0	intron_retention	FALSE	canonical	3	372	junction_3	33.2565782966318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	-5	True	ATTAAA	-15	NA	80426147	80419487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
Isoform_14290_7	chr12	+	2474	17	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_13	44.4675092061608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCAGAATGAAAGCCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	111725300	111773146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111761981_111762113_111772441_111772509_111772748
Isoform_14291_40	chr12	+	2412	16	FSM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	36	56	36	-7	multi-exon	FALSE	canonical	2	29	junction_13	35.2026514152935	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725318	111773153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
Isoform_14294_10	chr12	+	2385	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	45.6198242800971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725303	111761331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111760082_111760134_111760770
Isoform_14295_31	chr12	+	2356	16	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	36	3	combination_of_known_splicesites	FALSE	canonical	2	51	junction_12	36.3315595897317	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725318	111773148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111772441_111772509_111772748
Isoform_14296_11	chr12	+	2235	15	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	41.0915478672007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725313	111773153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111772441_111772509_111772748
Isoform_14297_7	chr12	+	2397	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	47.7933476713303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725318	111761331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111760770
Isoform_14298_18	chr12	+	2405	16	FSM	ENSMUSG00000021288.20	ENSMUST00000122300.8	2268	16	-145	8	19	-7	multi-exon	FALSE	canonical	2	29	junction_13	39.7419453754119	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725301	111773153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111761981_111762113_111772441_111772509_111772748
Isoform_14299_8	chr12	+	2257	15	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	36	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_13	44.4994840602973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	111725318	111773153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111772441_111772509_111772748
Isoform_1430_9	chr10	-	2112	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	-672	2	672	multi-exon	TRUE	canonical	3	337	junction_4	42.7631558704453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGCATATATGTCTG	7826	False	NA	NA	False	NA	NA	NA	80426147	80418815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
Isoform_14300_42	chr12	+	1311	8	FSM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	-16	-30	6	-5	multi-exon	FALSE	canonical	3	56	junction_5	290.764860465691	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780652	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793976_111794120_111794251
Isoform_14301_17	chr12	+	1308	8	NNC	ENSMUSG00000021286.9	novel	1265	8	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_5	314.41348052317	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780652	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793979_111794120_111794251
Isoform_14302_121	chr12	+	1308	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	11	-525	6	-5	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780652	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
Isoform_14304_48	chr12	+	1294	8	NNC	ENSMUSG00000021286.9	novel	794	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_6	286.13568923338	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780663	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793979_111794120_111794251
Isoform_14305_255	chr12	+	1254	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	49	5	6	-5	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780652	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
Isoform_14308_41	chr12	+	1240	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	264.970700686363	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACACAGCAGGCTCTGG	NA	False	NA	11	True	ATTAAA	-12	NA	111780663	111794815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793979_111794120_111794251
Isoform_1431_493	chr10	-	1440	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	0	2	0	multi-exon	FALSE	canonical	3	337	junction_4	42.7631558704453	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7826	False	NA	-5	True	ATTAAA	-15	NA	80426147	80419487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
Isoform_14312_14	chr12	+	2562	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	171	-11	-19	11	multi-exon	FALSE	canonical	2	5	junction_3	6.52467842666814	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGGTCTGTGGGCTGT	NA	False	NA	13	True	AATAAA	-27	NA	112073283	112094004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
Isoform_14313_3	chr12	+	2616	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	108	-2	-82	2	multi-exon	TRUE	canonical	2	5	junction_3	6.52467842666814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCTGGATGGGTCT	NA	False	NA	4	True	AATAAA	-18	NA	112073220	112093995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
Isoform_14314_3	chr12	+	2550	15	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.36407440461696	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCTGGATGGGTCT	NA	False	NA	4	True	AATAAA	-18	NA	112073284	112093995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_112073408_112078625_112078735_112079414_112079527_112080815_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
Isoform_14316_62	chr12	+	1796	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	0	-19	0	-2	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	NA	False	NA	NA	False	AATAAA	-38	NA	112586478	112607792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
Isoform_14318_4	chr12	+	1123	6	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14428	15	-4851	6	3prime_fragment	FALSE	canonical	3	75	junction_2	8.2365041127896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGGTCATTACACCTGT	1565	False	NA	NA	False	AATAAA	-25	NA	112600954	112607779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
Isoform_14319_8	chr12	+	1724	3	ISM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	198	0	-90	0	intron_retention	FALSE	canonical	3	1739	junction_2	34.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	17	True	AATAAA	-17	NA	112611310	112615579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_112611519_112613271_112613467_112614258
Isoform_14321_652	chr12	+	703	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	221	0	-67	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7076	False	NA	17	True	AATAAA	-17	NA	112611333	112615579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
Isoform_14322_95	chr12	+	755	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	169	0	-119	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7024	False	NA	17	True	AATAAA	-17	NA	112611281	112615579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
Isoform_14325_23	chr12	+	508	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	-67	-108	-67	0	multi-exon	FALSE	canonical	3	90	junction_1	805	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7076	False	NA	17	True	AATAAA	-17	NA	112611333	112615579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112611519_112614258_112614416_112615413
Isoform_14327_6	chr12	+	1948	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	34	0	23	0	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTGTTCTCTCT	4314	False	NA	NA	False	AATAAA	-45	NA	112727122	112735424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
Isoform_14328_28	chr12	+	1974	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	-15	1	-15	-1	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTTGTTGACTCAT	3886	False	NA	16	True	ATTAAA	-18	NA	112772541	112779871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
Isoform_1433_12	chr10	-	1247	4	NIC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	157.557044343381	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTTGGCTCCTTTGTGG	7826	False	NA	-3	True	ATTAAA	-17	NA	80426147	80419485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80419898_80419976_80420157_80422348_80422865_80426008
Isoform_14331_10	chr12	+	2107	4	ISM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	6	-6	1	6	intron_retention	FALSE	canonical	3	10	junction_1	18.3726850393609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940107	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872
Isoform_14332_21	chr12	+	1976	5	FSM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	8	-9	3	-6	multi-exon	FALSE	canonical	3	10	junction_1	16.3152535990097	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATGTAGATAAGTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	112940109	112942559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872_112940992_112941123
Isoform_14333_6	chr12	+	2271	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223368.2	691	3	-338	-1242	0	6	multi-exon	FALSE	canonical	3	45	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940106	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112940603_112940678_112940770_112940872
Isoform_14335_104	chr12	+	2090	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	-14	9	-14	6	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940155	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
Isoform_14336_35	chr12	+	2126	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	-50	9	13	6	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940119	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
Isoform_14339_3	chr12	+	2072	4	FSM	ENSMUSG00000002803.15	ENSMUST00000223508.2	724	4	-404	-944	-8	6	multi-exon	FALSE	canonical	2	3	junction_3	21.6384431561566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940161	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941135
Isoform_14340_3	chr12	+	2292	2	ISM	ENSMUSG00000002803.15	ENSMUST00000220567.2	832	3	-32	-1296	-8	6	intron_retention	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940161	112942556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_112940770_112940872
Isoform_14341_20	chr12	+	3244	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	18	2218	-7	45	multi-exon	TRUE	canonical	3	64	junction_11	15.2637802253402	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCAGATGTTGCTCTTG	1397	False	NA	59	True	AATACA	-17	NA	112978145	113035803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
Isoform_14343_4	chr12	+	746	2	ISM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	38052	-32	4827	0	3prime_fragment	FALSE	canonical	3	501	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCCTTCTGCGTCTT	1761	False	NA	23	True	ATTAAA	-40	NA	113099994	113100825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_113100053_113100137
Isoform_14344_139	chr12	+	1143	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	295	1	-41	-1	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTGTCGTGTGTGT	5917	False	NA	29	True	AATAAA	-22	NA	113104150	113109125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
Isoform_14346_106	chr12	+	407	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	39	-1	-2	1	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTGTTTTTGTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	113115670	113117498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
Isoform_14347_5	chr12	+	645	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	-199	-1	-199	1	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTGTTTTTGTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	113115432	113117498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
Isoform_1435_1098	chr10	-	2442	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	0	7	0	-1	multi-exon	TRUE	canonical	3	325	junction_4	58.371118714652	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCGAGTGCTATGTTGT	NA	False	NA	-6	True	AATAAA	-19	NA	80492328	80478457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
Isoform_14351_9	chr12	+	2440	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	0	1	0	-1	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCTCGCTGTCTCTGAA	NA	False	NA	NA	False	TATAAA	-10	NA	113120040	113128163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
Isoform_14352_3	chr12	+	2674	7	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-18	1	intron_retention	FALSE	canonical	3	190	junction_5	19.1978007999759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCGCTGTCTCTGAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	113120022	113128165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_113120192_113120294_113120374_113120780_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
Isoform_14354_57	chr12	+	1579	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	-7	2	-7	-2	multi-exon	FALSE	canonical	3	28	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGCTATTATTCCTG	845	False	NA	17	True	TTTAAA	-27	NA	113149542	113153141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_113149579_113151598
Isoform_14355_8	chr12	+	1922	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	34	2	-6	-2	multi-exon	FALSE	canonical	3	41	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116011377	116024210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116011487_116018341_116018469_116022524
Isoform_14357_3	chr12	+	5926	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-365	-1	-365	1	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAATATGTTTTTTGTTT	NA	False	NA	6	True	AATAAA	-19	NA	116244450	116336712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_14358_8	chr12	+	3081	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-8	2487	-8	-1617	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTATTTTCTTCTA	NA	False	NA	NA	False	GATAAA	-18	NA	116244807	116334224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_14360_14	chr12	+	5537	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	29	-6	3	6	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTTTTGTTTGTCTC	NA	False	NA	11	True	AATAAA	-24	NA	116244844	116336717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
Isoform_14362_4	chr12	+	4440	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-52	296	-52	-296	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACAC	NA	False	NA	NA	False	NA	NA	NA	116368969	116424935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14363_7	chr12	+	3793	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-46	937	-46	-937	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTCTTTTGTATA	NA	False	NA	4	True	AATAGA	-21	NA	116368975	116424294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14364_6	chr12	+	4209	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-296	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACAC	NA	False	NA	NA	False	NA	NA	NA	116369024	116424935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14365_9	chr12	+	3573	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-932	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTATATTGCT	NA	False	NA	9	True	AATAGA	-26	NA	116369024	116424299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14366_5	chr12	+	3591	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-21	-938	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369000	116424293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14369_3	chr12	+	3741	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-2	-939	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9214460498691	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTGTGTCTTTTGTA	NA	False	NA	2	True	AATAGA	-19	NA	116369051	116424292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_116369112_116369325_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_1437_299	chr10	-	2460	9	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	105	junction_4	127.904994038544	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCGAGTGCTATGTTGT	NA	False	NA	-6	True	AATAAA	-19	NA	80492328	80478457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
Isoform_14370_5	chr12	+	3628	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-33	-943	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAAATGTGTGTCTTT	NA	False	NA	-2	True	AATAGA	-15	NA	116368988	116424288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14372_3	chr12	+	3933	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	20	-938	intron_retention	FALSE	non_canonical	0	0	junction_6	57.1696630248104	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369073	116424293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379179_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
Isoform_14376_6	chr12	+	3920	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-21	481	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGCCTG	NA	False	NA	NA	False	NA	NA	NA	117497486	117720945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
Isoform_14378_23	chr12	+	2743	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	219	-5	-150	5	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACCTGTCTGTGGCAT	NA	False	NA	19	True	AATAAA	-19	NA	117807468	117842446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14379_51	chr12	+	2599	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	366	-8	-3	8	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTCTGTGGCATCCT	NA	False	NA	22	True	AATAAA	-22	NA	117807615	117842449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14382_4	chr12	+	3018	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	-55	-6	-55	6	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTGTCTGTGGCATC	NA	False	NA	20	True	AATAAA	-20	NA	117807194	117842447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14384_35	chr12	+	2596	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-3	8	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTCTGTGGCATCCT	NA	False	NA	22	True	AATAAA	-22	NA	117807615	117842449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14385_16	chr12	+	2713	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807490	117842441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14386_3	chr12	+	3524	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-11	928	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCAGAATACTGTGG	NA	False	NA	NA	False	NA	NA	NA	117807607	117843369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14387_4	chr12	+	2754	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.8209074068624	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807613	117842441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
Isoform_14389_11	chr12	+	709	4	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-300	-1589	multi-exon	FALSE	non_canonical	0	0	junction_1	60.8331050224026	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	20465637	20483829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20465889_20465927_20466065_20483306_20483434_20483635
Isoform_14390_10	chr12	+	1256	4	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-299	-16	multi-exon	FALSE	canonical	3	21	junction_3	53.2228021309163	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	TATAAA	-16	NA	20465638	20509196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554
Isoform_14391_32	chr12	+	1069	2	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-300	-16	multi-exon	FALSE	canonical	3	27	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	TATAAA	-16	NA	20465637	20509196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20466065_20508554
Isoform_14393_7	chr12	+	1769	4	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-302	738	intron_retention	FALSE	canonical	1	2	junction_2	4.49691252107735	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGTCTGTGAGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	20246614	20328767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20247044_20325015_20325414_20326835_20326942_20327931
Isoform_14394_8	chr12	+	3189	3	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-300	738	intron_retention	FALSE	canonical	2	8	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGTCTGTGAGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	20246616	20328767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20247044_20325015_20326942_20327931
Isoform_14395_3	chr12	+	2255	4	Fusion	ENSMUSG00000114041.3_ENSMUSG00000113964.2	novel	567	4	NA	NA	-291	739	intron_retention	FALSE	canonical	0	0	junction_2	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGGTCTGTGAGTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	20246625	20328768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_20247044_20325015_20325910_20326835_20326942_20327931
Isoform_14396_9	chr12	+	1805	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTCAGCTTGCAGTC	659	False	NA	20	True	AATACA	-29	NA	104343727	104360518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
Isoform_14398_3	chr12	+	1543	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	-17	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	35.1105397281215	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACAGGCTCTGAGCACA	659	False	NA	0	True	AATACA	-9	NA	104343727	104360498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_104343932_104355564_104355972_104357714_104357989_104358900_104359052_104359991
Isoform_14399_5	chr12	+	424	2	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTTTTCT	639	False	NA	14	True	NA	NA	NA	104343707	104349134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_104343932_104348934
Isoform_14400_4	chr12	+	953	2	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-293	37	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCATCAGGTTTATTCA	NA	False	NA	55	True	NA	NA	NA	18042840	18112502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_18043260_18111968
Isoform_14401_11	chr12	+	1087	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-300	37	multi-exon	FALSE	canonical	3	20	junction_2	10	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCATCAGGTTTATTCA	NA	False	NA	55	True	NA	NA	NA	18042833	18112502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr12_+_18043260_18074048_18074176_18111968
Isoform_14402_20	chr12	+	1873	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7272	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76948987	76968186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
Isoform_14403_19	chr12	+	852	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-40	-2159	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTGCTTGCTTTAAA	NA	False	NA	2	True	CATAAA	-17	NA	102709980	102711661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_102710030_102710858
Isoform_14404_10	chr12	+	2375	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1681	-1	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	278.776903604784	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGTGTGTATTTTCCT	3239	False	NA	13	True	AATAAA	-15	NA	110450490	110538121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
Isoform_14408_4	chr12	+	1369	13	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	279.190794977198	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTACTGAAGGGTAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	105976529	106041452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
Isoform_14410_9	chr12	+	1173	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-61	-1805	intron_retention	FALSE	canonical	3	11	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGGACCCATAGCTC	NA	False	NA	47	True	AATAAA	-41	NA	105303190	105348384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_105303253_105303488_105303819_105347603
Isoform_14411_4	chr12	+	1246	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-148	-1819	intron_retention	FALSE	canonical	3	11	junction_1	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGGAGAAGCACTTC	NA	False	NA	33	True	AATAAA	-27	NA	105303103	105348370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_105303253_105303488_105303819_105347603
Isoform_14412_3	chr12	+	673	2	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAAGTAGAACATTTGT	NA	False	NA	NA	False	NA	NA	NA	109918215	109919712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_109918700_109919523
Isoform_14414_3	chr12	+	3576	2	Genic_Genomic	ENSMUSG00000113600.2	novel	680	1	NA	NA	-2930	178	multi-exon	FALSE	canonical	1	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAGA	7656	False	NA	NA	False	TTTAAA	-4	NA	69166944	69170732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_+_69166981_69167192
Isoform_14415_7	chr12	+	3374	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	833	-8497	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGTTGTTCTATAAAA	253	False	NA	NA	False	AATAAA	-19	NA	76417872	76435227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_76418019_76431999
Isoform_14416_3	chr12	+	1789	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	286.853445871379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAGGGTAATTTATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	105976595	106041457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
Isoform_14418_3	chr12	+	3056	2	NNC	ENSMUSG00000071235.13	novel	516	2	NA	NA	353	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTGGCCTCCGGGAT	NA	False	NA	NA	False	AATAAA	-20	NA	84688145	84698227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_84688225_84695250
Isoform_14419_3	chr12	+	3331	2	NNC	ENSMUSG00000113052.2	novel	684	2	NA	NA	-2837	-2662	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAATTGTATGGTGAG	3324	False	NA	NA	False	TTTAAA	-11	NA	84239905	84243692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_84241969_84242424
Isoform_1442_4	chr10	-	3434	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	4	1	4	-1	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9985	False	NA	-47	True	AATAAA	-13	NA	80512123	80501161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
Isoform_14420_4	chr12	+	2109	16	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	-50	-1235	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	243.80407434386	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2304	False	NA	NA	False	AATAAA	-18	NA	55201838	55235123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_55202014_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
Isoform_14421_3	chr12	+	3496	8	NNC	ENSMUSG00000044912.12	novel	3043	6	NA	NA	-36268	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.494871659305393	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAATGAACATGTGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	74172722	74314683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_74172848_74176145_74176326_74208829_74209651_74269355_74269569_74275988_74276243_74281582_74282024_74284954_74285145_74313411
Isoform_14423_3	chr12	+	1560	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5172	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	31.6262900483478	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGACTTGCCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	108981555	108994372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr12_+_108981603_108990888_108991060_108992335_108992477_108993171
Isoform_14424_3	chr12	+	433	2	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	85571434	85572154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_85571668_85571954
Isoform_14425_3	chr12	+	3183	3	Genic_Genomic	ENSMUSG00000112949.2	novel	2773	1	NA	NA	-1953	124	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGCCTCAAGAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	87745959	87750809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_+_87746147_87747788_87749528_87749552
Isoform_14426_250	chr12	-	2347	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	-2	4	-2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCCTGTGGCTTAAT	NA	False	NA	83	True	ATTAAA	-24	NA	8550011	8547664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_8547700_8550000
Isoform_14428_289	chr12	-	2262	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	-2	89	-2	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTACATAAGAG	NA	False	NA	-2	True	AATAAA	-24	NA	8550011	8547749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_8547700_8550000
Isoform_1443_18	chr10	-	3395	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
Isoform_14431_3	chr12	-	838	1	Antisense	novelGene_ENSMUSG00000042734.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTACTTTGCAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	81710774	81709936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_-_81709900_81710800
Isoform_14434_7	chr12	-	187	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	7341	False	NA	NA	False	NA	NA	NA	83812603	83812416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_83812400_83812600
Isoform_14435_12	chr3	-	175	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84496770	84496595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_84496600_84496800
Isoform_14436_22	chr12	+	2275	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	69	0	69	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTCTAAGCCTAG	4044	False	NA	17	True	ATTAAA	-21	NA	83997450	83999725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_83997400_83999700
Isoform_14438_4	chr12	-	3043	1	Genic_Genomic	ENSMUSG00000042507.16	novel	NA	NA	NA	NA	-96	-34541	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	84240885	84237842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_-_84237800_84240900
Isoform_14439_4	chr12	-	2950	1	Genic_Genomic	ENSMUSG00000042507.16	novel	NA	NA	NA	NA	-3	-34541	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	84240792	84237842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_-_84237800_84240800
Isoform_1444_5	chr10	-	2363	3	NIC	ENSMUSG00000020190.14	novel	3065	12	NA	NA	3262	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	NA	False	NA	-47	True	AATAAA	-13	NA	80504548	80501161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80503167_80503799_80503965_80504355
Isoform_14440_3	chr12	-	4080	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84282473	84278393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_84278400_84282500
Isoform_14442_3	chr12	+	687	1	NIC	ENSMUSG00000021235.14	novel	1776	13	NA	NA	-2	-4381	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACCAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	84408810	84409497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_84408800_84409500
Isoform_14443_13	chr18	+	178	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	9473375	9473553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_9473400_9473600
Isoform_14445_76	chr12	+	1289	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	92	2	92	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTACCCTGGTGTGATCTT	NA	False	NA	8	True	AATAAA	-17	NA	84464061	84465350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84464100_84465400
Isoform_14446_7	chr12	-	2058	1	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	3	-9214	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84497774	84495716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_84495700_84497800
Isoform_14448_7	chr12	+	362	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84586578	84586940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_84586600_84586900
Isoform_14452_7	chr12	+	1805	1	FSM	ENSMUSG00000021241.8	ENSMUST00000222136.2	416	1	0	-1389	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGTTCTTATCGTGTT	NA	False	NA	9	True	TATAAA	-12	NA	84820051	84821856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_84820100_84821900
Isoform_14453_6	chr9	-	177	1	Intergenic	novelGene_1999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13702597	13702420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_13702400_13702600
Isoform_14454_4	chr12	-	223	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGTTCTTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	85055872	85055649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_85055600_85055900
Isoform_14456_3	chr12	-	4297	1	Genic_Genomic	ENSMUSG00000021252.12	novel	NA	NA	NA	NA	-331	-1046	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAGAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	85871655	85867358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_-_85867400_85871700
Isoform_14457_10	chr12	-	547	1	Antisense	novelGene_ENSMUSG00000020585.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8971867	8971320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_-_8971300_8971900
Isoform_14458_4	chr12	+	2609	1	NIC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	-1	-37243	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86516889	86519498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_86516900_86519500
Isoform_1446_60	chr10	-	2659	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	23	0	-4	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9140	False	NA	-1	True	AATAAA	-16	NA	80537666	80521086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
Isoform_1447_6	chr10	-	2817	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	-136	1	-14	-1	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGGGCTGCTCCTTGTT	8981	False	NA	-2	True	AATAAA	-15	NA	80537825	80521087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
Isoform_14476_4	chr12	-	179	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGGAA	3851	False	NA	NA	False	NA	NA	NA	86893171	86892992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_86893000_86893200
Isoform_14477_35	chr12	-	4174	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-77	1	-77	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCCTGAGTCAGCAA	NA	False	NA	-15	True	AATAAA	-15	NA	86931649	86927475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_86927500_86931600
Isoform_14479_147	chr12	-	4098	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-1	1	-1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCCTGAGTCAGCAA	NA	False	NA	-15	True	AATAAA	-15	NA	86931573	86927475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_86927500_86931600
Isoform_1448_3	chr10	-	3215	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	21	-554	-6	554	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGTTTTGACAGCCGT	9138	False	NA	NA	False	NA	NA	NA	80537668	80520532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
Isoform_14499_4	chr12	+	1690	1	Genic_Genomic	ENSMUSG00000021033.12	novel	NA	NA	NA	NA	-13	-7524	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	87194478	87196168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_+_87194500_87196200
Isoform_1450_84	chr10	-	4771	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	27	7	27	-7	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTGTGTGTTGTG	9235	False	NA	-9	True	ATTAAA	-7	NA	80578071	80542796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
Isoform_14501_6	chr12	+	2628	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAATACATG	NA	False	NA	NA	False	NA	NA	NA	87346643	87349271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_87346600_87349300
Isoform_14502_29	chr12	-	1154	1	FSM	ENSMUSG00000079036.11	ENSMUST00000091090.5	1335	1	182	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87490605	87489451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87489500_87490600
Isoform_14505_6	chr12	-	183	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87508263	87508080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_87508100_87508300
Isoform_14507_10	chr12	-	491	1	FSM	ENSMUSG00000021039.10	ENSMUST00000223119.2	479	1	-10	-2	-5	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	87519049	87518558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_87518600_87519000
Isoform_14508_4	chr12	-	2141	1	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	31954	653	31584	-653	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTAATGTTGCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	91524829	91522688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_91522700_91524800
Isoform_14509_3	chr12	+	2288	1	NIC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	104	-2399	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10440875	10443163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_10440900_10443200
Isoform_14510_3	chr12	-	2666	1	NIC	ENSMUSG00000020961.16	novel	731	4	NA	NA	2	9331	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACTGAAAAAAAAAAAAAAA	145	False	NA	NA	False	NA	NA	NA	91745909	91743243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_91743200_91745900
Isoform_14511_3	chr12	-	1094	1	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	0	-6589	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	91815914	91814820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_91814800_91815900
Isoform_14512_406	chr12	-	1747	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-419	-73	419	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAATCTTCCA	NA	False	NA	NA	False	AATAAA	-16	NA	10950313	10948566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_10948600_10950300
Isoform_14516_3	chr3	-	548	1	FSM	ENSMUSG00000069008.4	ENSMUST00000091117.4	1252	1	1123	-419	1123	419	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58010545	58009997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58010000_58010500
Isoform_14517_3	chr3	-	658	1	FSM	ENSMUSG00000069008.4	ENSMUST00000091117.4	1252	1	1013	-419	1013	419	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58010655	58009997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58010000_58010700
Isoform_14520_6	chr12	-	176	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	98587320	98587144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_98587100_98587300
Isoform_14521_3	chr12	+	175	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	98670894	98671069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_98670900_98671100
Isoform_14522_3	chr12	-	167	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	203547	6	101027	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTATTGTGTGTTGT	6156	False	NA	NA	False	AATAAA	-24	NA	99156509	99156342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_-_99156300_99156500
Isoform_14526_17	chr12	-	178	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	11275617	11275439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_11275400_11275600
Isoform_14528_9	chr12	+	183	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACACTCACATGGG	NA	False	NA	NA	False	NA	NA	NA	100882638	100882821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_100882600_100882800
Isoform_14529_6	chr12	-	2632	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	16	-22647	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101924486	101921854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_101921900_101924500
Isoform_14530_9	chr12	+	1386	1	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	9	-3232	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4545	False	NA	NA	False	NA	NA	NA	11316114	11317500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_11316100_11317500
Isoform_14532_6	chr12	-	417	1	NIC	ENSMUSG00000041716.8	novel	2795	2	NA	NA	889	-15635	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCGT	6379	False	NA	NA	False	NA	NA	NA	102724042	102723625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_102723600_102724000
Isoform_14534_6	chr12	+	180	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	102782733	102782913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_102782700_102782900
Isoform_14535_6	chr12	-	176	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103486661	103486485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_103486500_103486700
Isoform_14536_10	chr12	-	1789	1	FSM	ENSMUSG00002076601.1	ENSMUST00020183435.1	275	1	-901	-613	-901	613	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	8365	False	NA	NA	False	NA	NA	NA	104998509	104996720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_104996700_104998500
Isoform_14538_3	chr12	+	2476	1	Genic_Genomic	ENSMUSG00000021070.7	novel	NA	NA	NA	NA	-76	-29612	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	105529408	105531884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_+_105529400_105531900
Isoform_14541_7	chr12	+	184	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	105731376	105731560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_105731400_105731600
Isoform_14542_3	chr12	-	175	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106102398	106102223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_106102200_106102400
Isoform_14543_5	chr12	+	2396	1	Antisense	novelGene_ENSMUSG00000048251.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	107881853	107884249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_+_107881900_107884200
Isoform_14544_3	chr12	-	174	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGATC	NA	False	NA	NA	False	NA	NA	NA	108065895	108065721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_108065700_108065900
Isoform_14548_5	chr12	+	1707	1	FSM	ENSMUSG00000104858.3	ENSMUST00000199494.3	62	1	61	-1706	61	1706	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	179	False	NA	NA	False	ATTAAA	-41	NA	109561821	109563528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109561800_109563500
Isoform_14549_3	chr12	+	237	1	FSM	ENSMUSG00002076155.1	ENSMUST00020183598.1	73	1	3	-167	3	167	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACATAAAACAAAGCA	1627	False	NA	NA	False	NA	NA	NA	109602448	109602685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_109602400_109602700
Isoform_14550_26	chr12	+	1865	1	FSM	ENSMUSG00000075707.7	ENSMUST00000173014.3	2030	1	162	3	-30	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCTTTGGTCCGTTTA	NA	False	NA	24	True	AATAAA	-21	NA	110245663	110247528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110245700_110247500
Isoform_14551_7	chr12	+	2921	1	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	19	-37145	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATT	6490	False	NA	NA	False	AATATA	-13	NA	110567904	110570825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_110567900_110570800
Isoform_14552_8	chr12	+	177	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGAGGCT	1463	False	NA	NA	False	NA	NA	NA	110610815	110610992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_110610800_110611000
Isoform_14562_5	chr12	+	2261	1	FSM	ENSMUSG00000037957.15	ENSMUST00000191983.2	2252	1	-8	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCAAACCAG	5335	False	NA	NA	False	NA	NA	NA	110704414	110706675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110704400_110706700
Isoform_14563_4	chr12	+	229	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTCTATATGC	NA	False	NA	NA	False	AAAAAG	-32	NA	110733039	110733268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_110733000_110733300
Isoform_14564_7	chr12	+	2671	1	NIC	ENSMUSG00000021271.6	novel	502	2	NA	NA	6	-2355	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAACCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	110816718	110819389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_110816700_110819400
Isoform_14565_260	chr12	-	875	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	-50	-495	-50	495	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	110825378	110824503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_110824500_110825400
Isoform_14568_5656	chr12	+	510	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	-35	-37	-35	37	mono-exon	FALSE	NA	NA	NA	NA	NA	5656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	AATAAA	-14	NA	110864512	110865022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_110864500_110865000
Isoform_14571_6	chr12	+	169	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	111244379	111244548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_111244400_111244500
Isoform_14572_4	chr12	+	174	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATATATATATAT	274	False	NA	NA	False	NA	NA	NA	111274980	111275154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_111275000_111275200
Isoform_14574_3	chr12	-	177	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAATAAAGAAAAAAA	7270	False	NA	NA	False	NA	NA	NA	111531322	111531145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_111531100_111531300
Isoform_14578_4	chr12	-	205	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAAAAAAGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	111680496	111680291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_111680300_111680500
Isoform_14579_4	chr12	-	511	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTATTTCGATTC	NA	False	NA	NA	False	NA	NA	NA	111687170	111686659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_111686700_111687200
Isoform_14580_11	chr12	-	211	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGGAAAGAGCTTACA	NA	False	NA	NA	False	NA	NA	NA	73308949	73308738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_73308700_73308900
Isoform_14581_4	chr12	+	207	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111737605	111737812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_111737600_111737800
Isoform_14582_13	chr12	+	192	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAGAGAATATTTAC	NA	False	NA	NA	False	NA	NA	NA	111844507	111844699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_111844500_111844700
Isoform_14583_11	chr12	-	1927	1	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-15	-9520	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	13299179	13297252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_13297300_13299200
Isoform_14586_3	chr12	+	357	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	112953716	112954073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_112953700_112954100
Isoform_14588_3	chr12	-	930	1	FSM	ENSMUSG00000071414.6	ENSMUST00000166583.4	948	1	383	-365	383	365	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	13505588	13504658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_13504700_13505600
Isoform_14589_3	chr12	-	799	1	FSM	ENSMUSG00000071414.6	ENSMUST00000166583.4	948	1	512	-363	512	363	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	13505459	13504660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_13504700_13505500
Isoform_1459_143	chr10	-	852	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634088	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14591_4	chr12	+	179	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	115936820	115936999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_115936800_115937000
Isoform_14592_4	chr12	-	705	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116244724	116244019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_116244000_116244700
Isoform_14595_8	chr12	+	408	1	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-3	-25759	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117807615	117808023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_117807600_117808000
Isoform_14598_3	chr12	+	1872	1	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	5	-79761	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	17398463	17400335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_17398500_17400300
Isoform_14599_3	chr12	+	173	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3604045	3604218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_3604000_3604200
Isoform_1460_29	chr10	-	1138	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634374	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14600_3	chr12	-	179	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	17998908	17998729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_17998700_17998900
Isoform_14601_42	chr12	+	1482	1	FSM	ENSMUSG00000113402.2	ENSMUST00000221998.2	324	1	-264	-894	-264	894	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAT	NA	False	NA	NA	False	AAGAAA	-26	NA	18437491	18438973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_18437500_18439000
Isoform_14604_8	chr12	+	3016	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	-314	-7772	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	19094392	19097408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_+_19094400_19097400
Isoform_14606_3	chr12	+	1503	1	FSM	ENSMUSG00000113205.2	ENSMUST00000222931.2	127	1	-250	-1126	-250	1126	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAGACTAT	NA	False	NA	NA	False	NA	NA	NA	19225853	19227356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_19225900_19227400
Isoform_14607_3	chr8	-	179	1	Intergenic	novelGene_1935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	9481	False	NA	NA	False	NA	NA	NA	84712322	84712143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_84712100_84712300
Isoform_14608_4	chr12	-	178	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGCTATATAGC	NA	False	NA	NA	False	NA	NA	NA	19436514	19436336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_19436300_19436500
Isoform_14609_3	chr12	+	501	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20295416	20295917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_20295400_20295900
Isoform_14610_21	chr12	+	3016	1	FSM	ENSMUSG00000113749.2	ENSMUST00000220565.2	721	1	-2085	-210	-2085	210	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACAGCC	NA	False	NA	NA	False	AATAAA	-34	NA	20465637	20468653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_20465600_20468700
Isoform_14612_9	chr12	-	1514	1	FSM	ENSMUSG00000091071.3	ENSMUST00000110971.3	1471	1	-42	-1	-42	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAGACTAT	NA	False	NA	NA	False	AAGAAA	-26	NA	20865770	20864256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_20864300_20865800
Isoform_14613_7	chr12	-	168	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	73	False	NA	NA	False	NA	NA	NA	3646322	3646154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_3646200_3646300
Isoform_14614_3	chr12	+	177	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGCTGTATAGC	NA	False	NA	NA	False	NA	NA	NA	23855689	23855866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_23855700_23855900
Isoform_14619_493	chr12	-	1061	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-54	-665	-54	665	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAGATGTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	24689063	24688002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_24688000_24689100
Isoform_14625_8	chr12	-	381	1	Antisense	novelGene_ENSMUSG00000020649.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCATAGAGGTACTAC	3506	False	NA	NA	False	NA	NA	NA	24764098	24763717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_-_24763700_24764100
Isoform_14627_16	chr12	+	554	1	ISM	ENSMUSG00000020660.7	ENSMUST00000218089.2	977	3	5072	42	5053	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGGCTCTGATCTTCAA	NA	False	NA	15	True	AATAAA	-16	NA	4010022	4010576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_4010000_4010600
Isoform_14629_3	chr12	-	2602	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	-130	5839	-130	-5839	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAAACTTTTT	NA	False	NA	NA	False	ATTAAA	-42	NA	27392703	27390101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_27390100_27392700
Isoform_14631_3	chr12	-	473	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7518	False	NA	NA	False	NA	NA	NA	4031413	4030940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_4030900_4031400
Isoform_14632_3	chr12	+	173	1	Antisense	novelGene_ENSMUSG00000020664.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAACCCTTT	3207	False	NA	NA	False	NA	NA	NA	31394053	31394226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr12_+_31394100_31394200
Isoform_14633_16	chr12	-	1084	1	NIC	ENSMUSG00000020659.17	novel	3937	6	NA	NA	27	-11166	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31549527	31548443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_31548400_31549500
Isoform_14634_8	chr1	-	178	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131044163	131043985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_131044000_131044200
Isoform_14635_3	chr12	-	679	1	FSM	ENSMUSG00000020648.4	ENSMUST00000219855.2	296	1	-56	-327	-6	327	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTCACTTA	9054	False	NA	NA	False	AATAAA	-40	NA	31704831	31704152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_31704200_31704800
Isoform_14636_72	chr12	+	176	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31745929	31746105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_31745900_31746100
Isoform_14637_7	chr12	+	193	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGTACATGGA	NA	False	NA	NA	False	NA	NA	NA	31801739	31801932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_31801700_31801900
Isoform_14639_6	chr12	+	251	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAGGAATCCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	31850676	31850927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_31850700_31850900
Isoform_14640_8	chr14	+	178	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57009903	57010081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_57009900_57010100
Isoform_14641_5	chr12	-	180	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGGAATG	NA	False	NA	NA	False	NA	NA	NA	4165588	4165408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_4165400_4165600
Isoform_14642_6	chr12	-	546	1	NIC	ENSMUSG00000019256.18	novel	5548	11	NA	NA	18	-20069	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAATCCTGC	NA	False	NA	NA	False	NA	NA	NA	35585019	35584473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_35584500_35585000
Isoform_14643_8	chr8	-	191	1	Intergenic	novelGene_1977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATGGTAAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	114839469	114839278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_114839300_114839500
Isoform_14647_3	chr12	+	1562	1	NIC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	14	-4348	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGATGGGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4284040	4285602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_4284000_4285600
Isoform_14649_10	chr15	+	178	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATAGGTAT	8374	False	NA	NA	False	NA	NA	NA	76826661	76826839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_76826700_76826800
Isoform_14650_14	chr12	+	239	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCAACCAACTGAACA	NA	False	NA	NA	False	AATGAA	-28	NA	4351056	4351295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_4351100_4351300
Isoform_14652_3	chr12	-	436	1	Genic_Genomic	ENSMUSG00000021047.8	novel	NA	NA	NA	NA	-332	-98246	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACGAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46866044	46865608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_-_46865600_46866000
Isoform_14653_10	chr12	+	495	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	51022202	51022697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_51022200_51022700
Isoform_14657_6	chr12	+	2816	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGACAAAAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	51022234	51025050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_51022200_51025000
Isoform_14658_3	chr8	+	178	1	Intergenic	novelGene_1892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACTTGAC	9822	False	NA	NA	False	NA	NA	NA	13801970	13802148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_13802000_13802100
Isoform_14659_3	chr12	-	853	1	Genic_Genomic	ENSMUSG00000035181.7	novel	NA	NA	NA	NA	-40	-28256	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAAGCCCT	9959	False	NA	NA	False	ACTAAA	-32	NA	52018144	52017291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr12_-_52017300_52018100
Isoform_14660_7	chr12	+	217	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AAAACA	-15	NA	52020389	52020606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_52020400_52020600
Isoform_14662_4	chr12	-	2542	1	NIC	ENSMUSG00000035105.6	novel	2662	5	NA	NA	23	-22315	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54250623	54248081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_54248100_54250600
Isoform_14663_4	chr12	+	176	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGTAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	54716266	54716442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_54716300_54716400
Isoform_14664_3	chr12	-	216	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAACATATTAATTGTAA	NA	False	NA	NA	False	AAAAAG	-18	NA	4633693	4633477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_4633500_4633700
Isoform_14665_5	chr12	+	179	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGCAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	54852003	54852182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_54852000_54852200
Isoform_14666_5	chr11	+	192	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTATTCTTGCTGGC	NA	False	NA	NA	False	NA	NA	NA	77436674	77436866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_77436700_77436900
Isoform_14668_7	chr12	-	191	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGGCTGTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	55088789	55088598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_55088600_55088800
Isoform_14671_4	chr12	-	2796	1	FSM	ENSMUSG00002076190.1	ENSMUST00020183529.1	91	1	-14	-2691	-14	2691	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9947	False	NA	NA	False	NA	NA	NA	55867952	55865156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_55865200_55868000
Isoform_14672_4	chr12	+	191	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTTCTTTCTATTTT	101	False	NA	NA	False	NA	NA	NA	59070355	59070546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_59070400_59070500
Isoform_14673_3	chr12	+	205	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGAAATATTTCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	59125568	59125773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_59125600_59125800
Isoform_14674_4	chr12	+	215	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTCTTTTTA	3257	False	NA	NA	False	NA	NA	NA	59161545	59161760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_59161500_59161800
Isoform_14677_5	chr12	-	1883	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	0	-860	0	860	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	66331175	66329292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_66329300_66331200
Isoform_14678_5	chr12	-	1894	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	-11	-860	-11	860	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	66331186	66329292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_66329300_66331200
Isoform_14679_115	chr12	-	1022	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGCTTTGGTTGTTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	66331175	66330153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_66330200_66331200
Isoform_14684_159	chr12	+	615	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	-35	-24	-35	24	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67557494	67558109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_67557500_67558100
Isoform_14687_4	chr12	-	177	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	68200912	68200735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_68200700_68200900
Isoform_14688_17	chr12	+	5338	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	68604936	68610274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_68604900_68610300
Isoform_14689_51	chr12	+	5234	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_68605000_68610300
Isoform_1470_103	chr10	-	739	4	ISM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	628	-3	-31	0	3prime_fragment	FALSE	canonical	3	943	junction_2	138.96362433705	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80633766	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606
Isoform_14701_3	chr12	-	163	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69214075	69213912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_69213900_69214100
Isoform_14706_130	chr12	+	2513	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	34	67	34	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCCTAATCATTTTGC	2328	False	NA	72	True	AATAAA	-18	NA	69230964	69233477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69231000_69233500
Isoform_14707_19	chr12	+	2558	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	53	3	53	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGCATCACATCTTAA	2347	False	NA	136	True	AATAAA	-20	NA	69230983	69233541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_69231000_69233500
Isoform_14712_5	chr13	-	177	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119603381	119603204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_119603200_119603400
Isoform_14716_4	chr12	+	1413	1	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	4	-11578	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	69771767	69773180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_69771800_69773200
Isoform_14717_5	chr12	+	201	1	ISM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	15773	767	8930	-767	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGCTGAAAGTTTTACA	1258	False	NA	NA	False	NA	NA	NA	4909075	4909276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr12_+_4909100_4909300
Isoform_14718_4	chr12	+	181	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	2074	False	NA	NA	False	NA	NA	NA	71050469	71050650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_71050500_71050600
Isoform_14719_3	chr12	-	1773	1	FSM	ENSMUSG00000085622.10	ENSMUST00000222159.2	1790	1	3	14	3	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71062366	71060593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_71060600_71062400
Isoform_14720_5	chr12	-	238	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTCATGTACTCAAG	NA	False	NA	NA	False	NA	NA	NA	71092714	71092476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_71092500_71092700
Isoform_14721_4	chr12	+	175	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	71122921	71123096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_71122900_71123100
Isoform_14722_8	chr12	-	1111	1	FSM	ENSMUSG00000021079.17	ENSMUST00000223544.2	1098	1	-49	36	0	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAGAGAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	71183458	71182347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_71182300_71183500
Isoform_14724_16	chr12	-	869	1	NIC	ENSMUSG00000019718.9	novel	1831	5	NA	NA	59	-7248	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACGCTTCAGTGTCTTTG	NA	False	NA	-2	True	AATAAA	-23	NA	72132154	72131285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_-_72131300_72132200
Isoform_14726_12	chr5	+	182	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCGAAG	NA	False	NA	NA	False	NA	NA	NA	85906610	85906792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_85906600_85906800
Isoform_14727_8	chr12	-	197	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGGGAACTGAATGATC	NA	False	NA	NA	False	NA	NA	NA	72773795	72773598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_72773600_72773800
Isoform_14729_6	chr12	-	3031	1	FSM	ENSMUSG00000034435.7	ENSMUST00000042975.7	2991	1	-46	6	-46	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTATCACATTACTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	73593212	73590181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_73590200_73593200
Isoform_1473_600	chr10	-	873	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	387	0	-45	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634073	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14731_11	chr11	+	181	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76302255	76302436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_76302300_76302400
Isoform_14732_6	chr12	-	222	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	165	-39	165	39	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAGAAATG	NA	False	NA	-41	True	AATAAA	-17	NA	75677927	75677705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_-_75677700_75677900
Isoform_14738_5	chr12	+	6788	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	76269309	76276097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_76269300_76276100
Isoform_14739_14	chr12	+	556	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGAGGAAAATGTCCCA	NA	False	NA	NA	False	NA	NA	NA	76269309	76269865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_76269300_76269900
Isoform_1474_36	chr10	-	1218	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	42	0	-24	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634418	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14740_7	chrX	+	2284	1	Intergenic	novelGene_2192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGCTTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	122748619	122750903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_122748600_122750900
Isoform_14741_45	chr12	+	497	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGGTTTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	76269309	76269806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_76269300_76269800
Isoform_14745_15	chr12	+	2522	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	5	-1	5	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTCTGGCGTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	76451187	76453709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr12_+_76451200_76453700
Isoform_14746_3	chr12	+	192	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTAGAGTAAGAGGGGA	1357	False	NA	NA	False	NA	NA	NA	76499334	76499526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_76499300_76499500
Isoform_1475_158	chr10	-	1187	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	73	0	7	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634387	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14750_10	chr2	-	178	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157662600	157662422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_157662400_157662600
Isoform_14753_6	chr12	-	198	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACCTAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80490142	80489944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_80489900_80490100
Isoform_14754_5	chr12	-	202	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGATACTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	80503445	80503243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_80503200_80503400
Isoform_14755_4	chr12	+	176	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80543058	80543234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_80543100_80543200
Isoform_14761_28	chr12	-	194	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	80972491	80972297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_80972300_80972500
Isoform_14762_25	chr12	+	1313	1	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	3	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80992310	80993623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr12_+_80992300_80993600
Isoform_14768_43	chr12	-	221	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	AATAAA	-15	NA	81669930	81669709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_81669700_81669900
Isoform_14770_3	chr13	-	3457	14	ISM	ENSMUSG00000033799.11	ENSMUST00000096069.5	8338	20	-97	11114	-97	-6246	5prime_fragment	FALSE	canonical	3	47	junction_4	7.05347285313702	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTGCTGTCTGGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	3661205	3627148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
Isoform_14771_3	chr13	-	5562	14	ISM	ENSMUSG00000033799.11	ENSMUST00000096069.5	8338	20	56	8856	36	-3988	5prime_fragment	FALSE	canonical	3	47	junction_4	7.05347285313702	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATGAACAAAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	3661052	3624890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
Isoform_14775_3	chr13	-	3285	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	40	546	5	126	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTCTCTCCTGGTGG	NA	False	NA	-4	True	ATTAAA	-26	NA	3943538	3932563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
Isoform_14776_3	chr13	-	3446	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	3	-769	3	126	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTCTCTCCTGGTGG	NA	False	NA	-4	True	ATTAAA	-26	NA	3968217	3932563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
Isoform_14777_34	chr13	-	1284	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	36	2143	-4	-2136	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCTTGACAGAAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	4659137	4642891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_14778_6	chr13	-	1729	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	-7	1741	-7	-1734	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCTGTGTAAAGACACT	NA	False	NA	NA	False	AATAAA	-19	NA	4659180	4642489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
Isoform_14782_8	chr13	-	2687	22	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-31	7	combination_of_known_junctions	FALSE	canonical	3	34	junction_21	282.175103642483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTACTTGGTTTATTG	NA	False	NA	-7	True	ATTAAA	-17	NA	6686717	6631210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686561
Isoform_14783_499	chr13	-	2686	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	52	1407	0	7	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTACTTGGTTTATTG	NA	False	NA	-7	True	ATTAAA	-17	NA	6698761	6631210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_14784_63	chr13	-	2747	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	-8	1406	-8	8	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698821	6631209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_14786_8	chr13	-	2550	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-19	5	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGGTACTTGGTTTAT	NA	False	NA	-9	True	ATTAAA	-15	NA	6698780	6631212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
Isoform_14791_10	chr13	-	4530	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	4	-8	4	8	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGTGTTATTGG	NA	False	NA	-21	True	ATTAAA	-26	NA	8921076	8853022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
Isoform_14799_126	chr13	-	2419	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	62	6302	29	-153	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTTTGATGACTT	NA	False	NA	-22	True	AGTAAA	-10	NA	9046057	9022668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_14800_115	chr13	-	2442	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	39	6302	6	-153	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTTTGATGACTT	NA	False	NA	-22	True	AGTAAA	-10	NA	9046080	9022668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_14801_6	chr13	-	2995	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	45	5743	12	406	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGCCTAGTAACTTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	9046074	9022109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
Isoform_1481_33	chr10	-	1135	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-276	-326	-10	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634404	80631933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
Isoform_14811_3	chr13	-	3962	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	65	junction_14	30.2476175482787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	-2	True	AATAAA	-18	NA	9814490	9734872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
Isoform_14812_4	chr13	-	4088	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	-3	-261	-3	-1	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCAGTAAGCTGCT	NA	False	NA	1	True	AATAAA	-21	NA	9814995	9734869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
Isoform_14814_54	chr13	-	4540	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-75	3829	-57	-3	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGTTGAATACAAGGA	5886	False	NA	43	True	ATTAAA	-12	NA	12273056	12201426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
Isoform_14816_14	chr13	-	1068	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61770	-7	3598	-2	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGACAAACTTTATTA	NA	False	NA	1	True	AATAAA	-27	NA	12293835	12284313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
Isoform_14817_3	chr13	-	2774	20	NNC	ENSMUSG00000052374.17	novel	3013	21	NA	NA	2	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	25.2966882748144	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTTGACAAACTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	12355611	12284315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679_12293863_12295314_12295456_12297400_12297510_12303392_12303544_12305559_12305708_12306545_12306777_12309195_12309289_12315820_12315903_12321159_12321248_12323785_12323873_12324480_12324601_12325732_12325848_12355255_12355448_12355487
Isoform_14818_14	chr13	-	2570	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	223	-1	-9	-1	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATACTCTCTGGAATAG	NA	False	NA	-12	True	ATTAAA	-19	NA	12476396	12454296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
Isoform_14824_7	chr13	-	3200	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-36	-813	-5	-2	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568185	13532206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14825_6	chr13	-	2243	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-72	180	-12	1	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	13568221	13533199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14827_7	chr13	-	2932	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	38	1	-12	-1	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTCAACTGGTGCTGG	NA	False	NA	NA	False	AATAAA	-45	NA	13568161	13532205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14828_6	chr13	-	1989	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-15	997	-5	-1	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTGTAGAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13568214	13533201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14829_5	chr13	-	2955	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	14	2	-5	-2	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCAACTGGTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	13568185	13532206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14832_4	chr13	-	3585	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	49	0	-11	0	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568160	13533200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14833_31	chr13	-	1306	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	29	2299	0	-2299	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGAAATTTGTCATTC	NA	False	NA	-7	True	AATATA	-40	NA	13568180	13535499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14834_13	chr13	-	1356	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-21	2299	-21	-2299	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGAAATTTGTCATTC	NA	False	NA	-7	True	AATATA	-40	NA	13568230	13535499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14835_6	chr13	-	1405	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-21	2250	-21	-2250	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCATCTCGTTCATTGT	NA	False	NA	42	True	NA	NA	NA	13568230	13535450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14837_4	chr13	-	3192	4	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-5	2221	intron_retention	FALSE	canonical	3	203	junction_3	15.1510909031513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13568214	13537366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_13539781_13542173_13542397_13548943_13548994_13567709
Isoform_14839_57	chr13	-	1807	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	35	2	-7	-1	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGATTTCTCTGCCCTT	NA	False	NA	-7	True	AATAAA	-12	NA	14214188	14172538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_1484_23	chr10	-	958	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	306	-3	40	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634088	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
Isoform_14840_13	chr13	-	1838	13	FSM	ENSMUSG00000039233.13	ENSMUST00000159239.8	1855	13	18	-1	-7	1	multi-exon	FALSE	canonical	3	105	junction_7	16.4519502390041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGGAGAAAACAT	NA	False	NA	NA	False	NA	NA	NA	14214188	14177647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_14841_3	chr13	-	804	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	-15	120	6	-120	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	14214217	14193979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
Isoform_14842_4	chr13	-	1286	5	ISM	ENSMUSG00000021302.11	ENSMUST00000222164.2	1340	7	0	1717	0	295	5prime_fragment	FALSE	canonical	3	8	junction_4	116.164484675825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTAGCTTCTTTCAGT	NA	False	NA	0	True	AATAAA	-24	NA	14237998	14228258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
Isoform_14843_5	chr13	-	1280	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	1	287	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGACTCAGTAGCTT	NA	False	NA	-8	True	AATAAA	-16	NA	14237993	14228266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
Isoform_14845_3	chr13	-	4125	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	80	39	1	-39	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATACAAAAATAAA	NA	False	NA	-49	True	NA	NA	NA	14237993	14225282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_14847_19	chr13	-	3170	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	86	988	7	198	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14237987	14226231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_1485_21	chr10	-	1274	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	-10	-3	-10	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634404	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
Isoform_14850_66	chr13	-	1150	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	75	3019	0	291	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTCAGTAGCTTCTTT	NA	False	NA	-4	True	AATAAA	-20	NA	14237998	14228262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
Isoform_14853_4	chr13	-	1056	3	FSM	ENSMUSG00000021302.11	ENSMUST00000222687.2	762	3	-5	-289	-1	289	multi-exon	FALSE	canonical	2	3	junction_2	137.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGACTCAGTAGCTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	14237999	14228264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14229041_14229734_14229806_14237790
Isoform_14854_15	chr13	-	792	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-1	383	-1	77	multi-exon	FALSE	canonical	3	41	junction_2	520.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTAATTTGTGTATTT	NA	False	NA	-6	True	AATAAA	-26	NA	14787611	14784880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14785326_14786007_14786190_14787446
Isoform_14855_372	chr13	-	765	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	128	2120	-10	69	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCAATGGATTAATTT	NA	False	NA	-14	True	AATAAA	-18	NA	14787622	14784888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14785326_14786007_14786190_14787476
Isoform_14856_39	chr13	-	804	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	97	2112	-41	77	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTAATTTGTGTATTT	NA	False	NA	-6	True	AATAAA	-26	NA	14787653	14784880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14785326_14786007_14786190_14787476
Isoform_14861_11	chr13	-	770	3	FSM	ENSMUSG00000015672.5	ENSMUST00000015816.5	658	3	-33	-79	-21	79	multi-exon	FALSE	canonical	3	18	junction_2	532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTAATTTGTGTATTTCT	NA	False	NA	-4	True	AATAAA	-28	NA	14787633	14784878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_14785326_14786007_14786190_14787492
Isoform_14863_5	chr13	-	1461	2	NIC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-20	73	intron_retention	FALSE	canonical	3	1113	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGGATTAATTTGTGT	NA	False	NA	-10	True	AATAAA	-22	NA	14787632	14784884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_14786190_14787476
Isoform_14864_8	chr13	-	2561	4	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-495	47675	-49	1163	5prime_fragment	FALSE	canonical	3	56	junction_1	11.3431330181157	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAGAAAAAGATATTG	NA	False	NA	NA	False	AATAGA	-24	NA	17979731	17939654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_14865_8	chr13	-	2746	4	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-680	47675	-234	1163	5prime_fragment	FALSE	canonical	3	56	junction_1	11.3431330181157	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAGAAAAAGATATTG	NA	False	NA	NA	False	AATAGA	-24	NA	17979916	17939654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_14866_8	chr13	-	2408	4	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-342	47675	104	1163	5prime_fragment	FALSE	canonical	3	56	junction_1	11.3431330181157	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAGAAAAAGATATTG	NA	False	NA	NA	False	AATAGA	-24	NA	17979578	17939654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_17939679_17941020_17941192_17946885_17947543_17978022
Isoform_14878_43	chr13	-	918	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	30	1740	30	-1740	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGCTCAATTGACTGA	NA	False	NA	-19	True	AATAAA	-22	NA	18118794	18056895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
Isoform_14879_4	chr13	-	1396	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	16	1276	16	-1276	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGCATATTAATTACC	NA	False	NA	-4	True	AGTAAA	-21	NA	18118808	18056431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
Isoform_14884_19	chr13	-	1851	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	23	6870	2	635	multi-exon	FALSE	canonical	3	467	junction_2	27.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTCTACATTGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	18167911	18162784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_14885_9	chr13	-	3411	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	15	5318	-6	2187	multi-exon	FALSE	canonical	3	467	junction_2	27.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACCAGTCAAGACTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	18167919	18161232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_14886_59	chr13	-	1219	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	0	7525	0	-20	multi-exon	FALSE	canonical	3	467	junction_2	27.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTGAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	18167934	18163439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_14887_89	chr13	-	1153	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	24	7567	3	-62	multi-exon	FALSE	canonical	3	467	junction_2	27.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATTTATGTATTTATGA	NA	False	NA	NA	False	AATAAA	-20	NA	18167910	18163481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18164368_18166212_18166335_18167765
Isoform_1489_37	chr10	-	949	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-45	0	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634073	80631933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
Isoform_14891_16	chr13	-	1406	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-21	6	0	-3	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579925	19541851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
Isoform_14892_316	chr13	-	1289	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	32	6	-4	-3	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579933	19541851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_14894_9	chr13	-	1403	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTGTGTGTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19579944	19541851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
Isoform_14896_19	chr13	-	1169	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-40	-1	8	1	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCATGCCCCTGCTTTG	NA	False	NA	-2	True	AATAAA	-19	NA	19579944	19549124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
Isoform_14897_8	chr13	-	2326	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	20	17	4	-17	multi-exon	FALSE	canonical	3	59	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATTGGTTATCTTC	NA	False	NA	NA	False	AATAAA	-41	NA	19803954	19775892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_19777519_19778616_19778826_19803463
Isoform_14901_55	chr13	-	2563	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	33	4	-6	-4	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTGTTGGTTCTTACT	NA	False	NA	-2	True	AATAAA	-19	NA	21586892	21571176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
Isoform_14903_13	chr13	-	2821	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	37.8386046254351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTTCTTACTTGG	NA	False	NA	1	True	AATAAA	-22	NA	21586864	21571173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586561
Isoform_14907_52	chr13	-	2560	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	0	1	0	-1	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTTCTTACTTGG	NA	False	NA	1	True	AATAAA	-22	NA	21586883	21571173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
Isoform_14909_18	chr13	-	2679	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-14	-1850	0	1688	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTATAAGTAGGGT	9006	False	NA	-11	True	AATAAA	-14	NA	23553378	23539512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
Isoform_14910_5	chr13	-	3157	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	7	-2349	7	-1741	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGATT	9027	False	NA	NA	False	AATGAA	-5	NA	23553357	23539013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
Isoform_14916_3	chr13	-	2582	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	20	2242	6	1686	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTGTGTATAAGTAGG	9026	False	NA	-13	True	AATAAA	-12	NA	23553358	23539514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
Isoform_14917_3	chr13	-	3103	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	2	1739	2	-1739	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	9008	False	NA	NA	False	AATGAA	-7	NA	23553376	23539011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
Isoform_14918_254	chr13	-	1284	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-10	3182	-10	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	-21	True	AATAAA	-17	NA	23608046	23605712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23606506_23606652_23606853_23607755
Isoform_14919_3	chr13	-	5317	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGACTTCTTCCAGTT	NA	False	NA	-1	True	AATAAA	-16	NA	24464944	24196466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
Isoform_14920_5	chr13	-	988	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	-19	-246	-19	0	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945478	24935827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
Isoform_14921_453	chr13	-	978	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945921	24935827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
Isoform_14926_70	chr13	-	671	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	46	4	46	-4	multi-exon	FALSE	canonical	3	260	junction_1	3	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTAAGGAAGTATTTT	4863	False	NA	-7	True	AATAAA	-15	NA	25015454	25001934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_25002175_25004697_25004883_25015208
Isoform_14928_3	chr13	-	5654	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	-21	14	-21	-14	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTGGGTTAAAGTGA	NA	False	NA	-13	True	AATAAA	-17	NA	25121665	25091575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
Isoform_14929_19	chr13	-	1687	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	20	3940	20	-3940	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACATTCCATCCATTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	25121624	25095501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
Isoform_14931_3	chr13	-	6424	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	46	565	46	-565	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATAAGAGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	25204316	25172030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
Isoform_14932_56	chr13	-	1514	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	65	5456	65	677	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTTGAGACTAAGAAGA	NA	False	NA	-4	True	ACTAAA	-45	NA	25204297	25176921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
Isoform_14933_153	chr13	-	2594	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	29	6	-2	-6	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACACTGTGTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	30039628	29509289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_14935_5	chr13	-	1386	12	FSM	ENSMUSG00000006191.18	ENSMUST00000131792.8	2019	12	-28	661	3	-661	multi-exon	FALSE	canonical	3	157	junction_8	15.5292313007885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTCTGCTCATAGGA	NA	False	NA	NA	False	NA	NA	NA	30039654	29658511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_14936_3	chr13	-	2050	12	FSM	ENSMUSG00000006191.18	ENSMUST00000131792.8	2019	12	-30	-1	1	1	multi-exon	FALSE	canonical	3	157	junction_8	15.5292313007885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTGAG	NA	False	NA	NA	False	NA	NA	NA	30039656	29657849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_14937_4	chr13	-	596	5	ISM	ENSMUSG00000006191.18	ENSMUST00000123641.8	907	7	-1	68288	-1	167	5prime_fragment	FALSE	canonical	3	157	junction_1	20.481699148264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAATGAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30039641	29961111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_14939_5	chr13	-	1737	6	FSM	ENSMUSG00000006191.18	ENSMUST00000129231.2	694	6	-9	-1034	0	1034	multi-exon	FALSE	canonical	3	9	junction_1	95.4136258612993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATTGTGTATAGAAATG	NA	False	NA	NA	False	AATAAA	-11	NA	30039657	30019943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30021054_30022497_30022686_30030210_30030324_30033921_30034092_30038880_30038925_30039545
Isoform_1494_22	chr10	-	1035	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	40	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634088	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
Isoform_14940_21	chr13	-	5072	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	25	0	25	0	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30170021	30090557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
Isoform_14942_7	chr13	-	1900	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	0	3197	0	-3197	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGATGAATTAATT	NA	False	NA	NA	False	AGTAAA	-16	NA	30170046	30093754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
Isoform_14944_408	chr13	-	1173	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	46	144	46	-144	multi-exon	FALSE	canonical	3	2063	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTTCTCATCTAAATT	NA	False	NA	-15	True	AATAAA	-19	NA	30729299	30724434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30725325_30729016
Isoform_14946_30	chr13	-	1313	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	46	4	46	-4	multi-exon	FALSE	canonical	3	2063	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTATGTATTATTTTGT	NA	False	NA	-6	True	ATTAAA	-15	NA	30729299	30724294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30725325_30729016
Isoform_14953_19	chr13	-	4299	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-42	-1	-3	1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	31158079	30997900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
Isoform_14955_45	chr13	-	1683	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	26	4	26	-4	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGAGTTTGCTGTGTA	NA	False	NA	-8	True	ATTAAA	-22	NA	32522697	32003565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
Isoform_1496_22	chr10	-	1351	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634404	80631932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
Isoform_14960_95	chr13	-	1292	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	621	5	-621	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATCTTTCTTTTGTAT	4874	False	NA	-4	True	AATAAA	-14	NA	33035163	33026695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
Isoform_14961_9	chr13	-	1905	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	8	5	-8	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGATGAAGCAATCCA	4874	False	NA	NA	False	AATAAA	-17	NA	33035163	33026082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
Isoform_14962_299	chr13	-	1340	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089168	34063798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
Isoform_14963_11	chr13	-	4008	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-83	-2600	-83	2600	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCGTTGCTCTTTTCTG	NA	False	NA	-2	True	NA	NA	NA	34089236	34061198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
Isoform_14964_8	chr13	-	1547	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-222	0	-222	0	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089375	34063798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
Isoform_14966_20	chr13	-	1352	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-18	-7	-18	6	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGAGTGTTTTCTAGGA	NA	False	NA	-1	True	AATAAA	-25	NA	34089709	34063792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
Isoform_14968_14	chr13	-	1193	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089196	34063798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
Isoform_14971_26	chr13	-	1565	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	145.701464188479	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8583	False	NA	-7	True	AATAAA	-19	NA	34119855	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551
Isoform_14972_9	chr13	-	1544	8	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	174.090991924877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551_34119778_34119904
Isoform_14973_7	chr13	-	1567	7	ISM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	205	9	-3	0	3prime_fragment	FALSE	canonical	0	0	junction_6	156.4210841145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8577	False	NA	-7	True	AATAAA	-19	NA	34119861	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555
Isoform_14975_5	chr13	-	1543	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	102	9	-3	0	multi-exon	FALSE	canonical	0	0	junction_6	180.800939134278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8474	False	NA	-7	True	AATAAA	-19	NA	34119964	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
Isoform_14976_6	chr13	-	1441	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	152.257092518615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8657	False	NA	-7	True	AATAAA	-19	NA	34119781	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119601
Isoform_14977_4	chr13	-	1512	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	152.257092518615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGTCTGCCTCACTG	8594	False	NA	1	True	AATAAA	-27	NA	34119844	34101901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119601
Isoform_14978_3	chr13	-	1486	7	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	145	0	-3	0	3prime_fragment	FALSE	canonical	3	43	junction_6	141.587134537947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8604	False	NA	-7	True	AATAAA	-19	NA	34119834	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609
Isoform_14979_24	chr13	-	1345	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8605	False	NA	-7	True	AATAAA	-19	NA	34119833	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
Isoform_14980_83	chr13	-	1318	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	220	9	0	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
Isoform_14981_17	chr13	-	1380	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	158	9	43	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8415	False	NA	-7	True	AATAAA	-19	NA	34120023	34101909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
Isoform_14983_205	chr13	-	1600	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	1	9	1	-9	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTATGGTCCTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	34261989	34258265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
Isoform_14986_36	chr13	-	1924	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	258	0	-258	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTACACGACTTGTTTA	NA	False	NA	-11	True	AAGAAA	-21	NA	34314337	34310988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_14987_130	chr13	-	1838	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-130	474	-18	-474	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGTCCTCTTTTCTTTC	NA	False	NA	-1	True	CATAAA	-14	NA	34314467	34311204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_14988_869	chr13	-	1708	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	474	0	-474	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGTCCTCTTTTCTTTC	NA	False	NA	-1	True	CATAAA	-14	NA	34314337	34311204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_14990_17	chr13	-	2719	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	10	590	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34314327	34310140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
Isoform_14995_4	chr13	-	1870	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	805	9	0	-2	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTAGAGAGGATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	34836664	34811825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
Isoform_14996_4	chr13	-	2275	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	401	8	401	-1	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGAGAGGATGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	34837068	34811824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
Isoform_14998_9	chr13	-	1561	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	52.8942574306115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178094	35161736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
Isoform_14999_7	chr13	-	1389	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	9	-3	0	3	multi-exon	FALSE	canonical	3	29	junction_9	51.0630208542878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178106	35161736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
Isoform_150_6	ERCC-00148	+	477	1	FSM	ERCC-00148A	DQ883642	478	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00148_+_0_500
Isoform_15000_29	chr13	-	1579	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	162	5	3	3	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178102	35161736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
Isoform_15003_28	chr13	-	1385	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	35	6	13	3	multi-exon	FALSE	canonical	3	71	junction_9	38.39206450927	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCCTTAAGAATTCA	NA	False	NA	NA	False	AATAAA	-11	NA	35178092	35161736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
Isoform_15004_11	chr13	-	1487	10	NIC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_9	51.9781530555072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178092	35161732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
Isoform_15005_106	chr13	-	1134	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	14	3232	-1	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090328	36080686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
Isoform_15006_120	chr13	-	1038	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-16	1064	-16	-1064	multi-exon	FALSE	canonical	3	325	junction_1	9.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATTTATTTCCTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	36301525	36163441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_36163891_36276788_36276910_36301057
Isoform_15007_26	chr13	-	1071	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-51	1066	-51	-1066	multi-exon	FALSE	canonical	3	325	junction_1	9.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGCATTTATTTCCTG	NA	False	NA	NA	False	AATAAA	-12	NA	36301560	36163443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_36163891_36276788_36276910_36301057
Isoform_15010_3	chr13	-	584	4	NNC	ENSMUSG00000100760.2	novel	526	3	NA	NA	1868	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGAGTCTGTTTACTG	NA	False	NA	NA	False	NA	NA	NA	37617257	37605808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_37606132_37613995_37614157_37615394_37615464_37617226
Isoform_15011_95	chr13	-	2676	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	6611	-14	-6611	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGTTTAACTAAAAAC	5892	False	NA	0	True	ATTAAA	-15	NA	38178147	38161987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_15012_291	chr13	-	2456	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	82	6795	22	-6795	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCTGTATAATCTGTT	5928	False	NA	-44	True	AATATA	-17	NA	38178111	38162171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_15015_46	chr13	-	3065	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	6222	-14	-6222	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTTTTCAGAATTTAT	5892	False	NA	0	True	AATATA	-17	NA	38178147	38161598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_15017_8	chr13	-	2554	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-13	6792	-13	-6792	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTATAATCTGTTTAT	5833	False	NA	-41	True	AATATA	-20	NA	38178206	38162168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
Isoform_15027_2091	chr13	-	2609	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	35	199	35	-1	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	2091	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAAAAGTCTGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	38712431	38684253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
Isoform_15034_18	chr13	-	1763	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	9	3862	-8	-3862	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTATTTGAGATTTCT	NA	False	NA	-25	True	ATTAAA	-18	NA	38819076	38786678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
Isoform_15035_440	chr13	-	1003	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	60	1490	12	-1490	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAACTTTTGTTTGTT	NA	False	NA	-9	True	AGTAAA	-11	NA	38842974	38829672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
Isoform_15037_9	chr13	-	1103	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	-40	1490	-40	-1490	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAACTTTTGTTTGTT	NA	False	NA	-9	True	AGTAAA	-11	NA	38843074	38829672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
Isoform_15040_8	chr13	-	1925	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	292	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_6	14.9004929904357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGGTGGGAAGAACT	NA	False	NA	NA	False	AATAAA	-16	NA	39144508	39116114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
Isoform_15041_3	chr13	-	1608	9	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	8.40293847412915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144515	39116283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
Isoform_15044_8	chr13	-	3748	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-60	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2746180929294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTGCAACTTTTCT	7499	False	NA	NA	False	AATAAA	-16	NA	41373941	41335973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_41337674_41337708_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_15045_11	chr13	-	3719	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	2	119	2	-1	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATCTTGCAACTTTT	7561	False	NA	NA	False	AATAAA	-14	NA	41373879	41335975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
Isoform_15046_4	chr13	-	1099	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	75	428	7	-3	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTGACATCTCCTGTT	NA	False	NA	-6	True	AATAAA	-42	NA	42001085	41918036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
Isoform_15047_98	chr13	-	1142	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	101	3	5	1	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324859	43305218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_15048_75	chr13	-	1228	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	15	3	1	1	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324945	43305218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_1505_29	chr10	-	3442	2	FSM	ENSMUSG00000051067.9	ENSMUST00000053986.9	3439	2	-6	3	-6	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCAGACGTTTAGATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	80679879	80668637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80671976_80679775
Isoform_15050_4	chr13	-	1122	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	118	-1	5	1	multi-exon	FALSE	canonical	1	7	junction_7	94.4833426632246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGGCGTGGCCATG	NA	False	NA	-20	True	AGTAAA	-13	NA	43324859	43305218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
Isoform_15051_4	chr13	-	2317	7	NIC	ENSMUSG00000021368.16	novel	1246	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	148	junction_6	49.8754003047149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324946	43305219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
Isoform_15052_5	chr13	-	2603	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-24	1760	6	1546	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	43713661	43693628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_15053_49	chr13	-	1095	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-22	3266	8	40	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTTCATTGTTTTG	NA	False	NA	-11	True	AATAAA	-12	NA	43713659	43695134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_15054_8	chr13	-	1118	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-45	3266	-15	40	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTTCATTGTTTTG	NA	False	NA	-11	True	AATAAA	-12	NA	43713682	43695134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
Isoform_15058_109	chr13	-	1306	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	54	2	-2	-2	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTGCAGCTGGTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	45155569	45075556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
Isoform_1506_6	chr10	-	462	4	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_2	1713.65710300126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	-13	True	AATAAA	-25	NA	80691041	80688658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80688935_80689591_80689660_80690451_80690543_80691014
Isoform_15060_18	chr13	-	5963	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-53	199	-53	-199	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881469	46833579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
Isoform_15062_4	chr13	-	6193	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-73	12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	70.1643680848964	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTACTTCTAGCTT	NA	False	NA	-21	True	AATAAA	-13	NA	46881489	46833368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_46834718_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
Isoform_15064_4	chr13	-	430	3	ISM	ENSMUSG00000021375.12	ENSMUST00000223881.2	3917	16	-66	29808	-66	1	5prime_fragment	FALSE	canonical	3	53	junction_1	9	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAAGGTATGTGATGG	NA	False	NA	NA	False	ATTAAA	-41	NA	46940180	46932378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_46932470_46938721_46938869_46939988
Isoform_15066_16	chr13	-	1001	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	72	1635	0	1	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTAGCCATGGTTTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	47196614	47178653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_15069_11	chr13	-	1033	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	40	1635	-26	1	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTAGCCATGGTTTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	47196646	47178653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
Isoform_1507_6	chr10	-	928	3	FSM	ENSMUSG00000035215.10	ENSMUST00000217781.2	646	3	-174	-108	-4	0	multi-exon	FALSE	canonical	3	4365	junction_1	93.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	-13	True	AATAAA	-25	NA	80691031	80688658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80688935_80689591_80689664_80690451
Isoform_15070_5	chr13	-	1048	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTATTAGCCATGGTT	NA	False	NA	-4	True	ATTAAA	-15	NA	47196687	47178656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
Isoform_15073_11	chr13	-	2558	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	330	3	-30	-3	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	False	NA	-18	True	AATAAA	-17	NA	47259336	47238260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
Isoform_15075_80	chr13	-	2546	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	7	3	0	-3	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	False	NA	-18	True	AATAAA	-17	NA	47259659	47238260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
Isoform_15083_18	chr13	-	890	6	FSM	ENSMUSG00000021377.16	ENSMUST00000129352.3	876	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	1443	junction_3	105.718494124727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTTTAAGCTGTT	NA	False	NA	26	True	AAGAAA	-12	NA	47259320	47251630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
Isoform_15084_142	chr13	-	894	7	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	7	13373	0	0	5prime_fragment	FALSE	canonical	3	1333	junction_6	133.111482099279	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTTTAAGCTGTT	NA	False	NA	26	True	AAGAAA	-12	NA	47259659	47251630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
Isoform_1509_465	chr10	-	462	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	2	4	2	-4	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTTCCTGCTCTGTAA	NA	False	NA	-17	True	AATAAA	-21	NA	80691041	80688662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
Isoform_15095_4	chr13	-	691	3	FSM	ENSMUSG00000097326.3	ENSMUST00000180777.3	672	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	15	junction_1	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTTGTATGTGTGAT	NA	False	NA	0	True	ATTAAA	-14	NA	48427380	48425889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_48426292_48426385_48426533_48427238
Isoform_15096_9	chr13	-	2947	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	115	1340	32	-2	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAACTTGAAGC	NA	False	NA	NA	False	AATACA	-13	NA	48779025	48732687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
Isoform_15098_6	chr13	-	4323	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	80	-1	-3	1	multi-exon	TRUE	canonical	3	9	junction_8	3.87138919781874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCCGTCTTGTGGTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	48779060	48731346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
Isoform_15099_3	chr13	-	4942	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	162	1	162	-1	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTATGGTGTGGCTTTT	6545	False	NA	-19	True	AATAAA	-20	NA	49121331	49032695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
Isoform_151_5	ERCC-00154	+	518	1	FSM	ERCC-00154A	DQ854997	521	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	2	520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00154_+_0_500
Isoform_1510_27	chr10	-	468	4	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	184	junction_3	2016.46428736594	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTCCTGCTCTGTAAC	NA	False	NA	-16	True	AATAAA	-22	NA	80691043	80688661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80688935_80689591_80689664_80690451_80690546_80691014
Isoform_15101_4	chr13	-	915	6	NIC	ENSMUSG00000037960.12	novel	937	7	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	138.488411067497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369429	49356425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369229
Isoform_15102_203	chr13	-	792	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	13	-1	13	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369489	49356425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
Isoform_15103_9	chr13	-	944	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369502	49356425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
Isoform_15105_3	chr13	-	851	5	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	161.537147430552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369513	49356425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_49356712_49357193_49357361_49358667_49358822_49361479_49361623_49369412
Isoform_15106_7	chr13	-	1136	5	FSM	ENSMUSG00000021384.15	ENSMUST00000058196.13	1418	5	140	142	0	-3	multi-exon	FALSE	canonical	2	5	junction_4	5.02493781056044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGTAGCCACCTTATC	NA	False	NA	1	True	AATAAA	-13	NA	49401630	49384307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_49384808_49390899_49391089_49392264_49392413_49393958_49394148_49401520
Isoform_15107_60	chr13	-	1122	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	19	3	1	-3	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATAGTGCTTTGTACA	NA	False	NA	-7	True	AATAAA	-18	NA	49806242	49617501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
Isoform_15108_3	chr13	-	1286	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	-140	-2	-140	2	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGCTTTGTACAGTTAA	NA	False	NA	-2	True	AATAAA	-23	NA	49806401	49617496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
Isoform_15110_4	chr13	-	960	6	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	81.0668859646157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTTTGTACAGTTAAG	NA	False	NA	-1	True	AATAAA	-24	NA	49806252	49617495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49803596_49803776_49806058
Isoform_15114_7	chr13	-	3157	18	NIC	ENSMUSG00000021451.17	novel	1249	5	NA	NA	-15	-6	combination_of_known_splicesites	TRUE	canonical	1	2	junction_2	67.7604165309136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGCATGTCTCTAGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	51947724	51839570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
Isoform_15115_21	chr13	-	4444	16	FSM	ENSMUSG00000021451.17	ENSMUST00000021900.14	4482	16	36	2	36	-2	multi-exon	FALSE	canonical	3	95	junction_9	25.4317387005555	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	51947747	51855283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
Isoform_15117_62	chr13	-	1316	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	0	4	0	-4	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGAAGTTATACCAA	NA	False	NA	-18	True	AATAAA	-18	NA	53083697	52989158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
Isoform_15120_7	chr13	-	1174	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	139.021948054314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGAAGTTATACCAA	NA	False	NA	-18	True	AATAAA	-18	NA	53083705	52989158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53052685_53052773_53073036_53073125_53073234_53073303_53083490
Isoform_15121_14	chr13	-	2632	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	-7	2	0	-2	multi-exon	FALSE	canonical	3	17	junction_1	210.944437128727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGGCTGCTCTCT	NA	False	NA	-26	True	AATAAA	-15	NA	53083697	53061082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
Isoform_15122_3	chr13	-	3213	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	20	2	0	-2	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATCTCTTGGTCACAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	53083697	53064247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
Isoform_15123_29	chr13	-	563	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	33	2639	0	0	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCGGTTCCCAGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	53083684	53066884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
Isoform_15124_74	chr13	-	2021	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	5	0	5	0	multi-exon	FALSE	canonical	3	64	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	False	NA	1	True	AATAAA	-19	NA	53135104	53121244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53123058_53134896
Isoform_15127_109	chr13	-	3967	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	17	1	17	-1	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTATTATCTCTGG	NA	False	NA	-29	True	NA	NA	NA	53440143	53263353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
Isoform_15128_99	chr13	-	4058	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-76	3	-76	-3	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTGTATTATCTCT	NA	False	NA	-31	True	NA	NA	NA	53440236	53263355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
Isoform_1513_883	chr10	-	585	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	179	461	-5	-7	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCGTGTCACCTCAC	5627	False	NA	-14	True	AATAAA	-18	NA	80736624	80735744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80736094_80736315_80736385_80736457
Isoform_15131_3	chr13	-	4078	6	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	16	-6464	intron_retention	FALSE	canonical	3	114	junction_2	5.42586398650021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAATTAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	53440144	53269816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
Isoform_15133_174	chr13	-	2570	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	33	3	1	-3	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTCTGTTTGGATAG	1862	False	NA	-21	True	AATAAA	-24	NA	53531400	53486786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
Isoform_15134_12	chr13	-	2631	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	32	-57	0	57	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCCCTGTGTGTTTTTC	1861	False	NA	39	True	NA	NA	NA	53531401	53486726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
Isoform_15137_3	chr13	-	1205	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	238	1010	238	-1010	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCCAGATGTAAAAATT	NA	False	NA	NA	False	AATAAA	-15	NA	53626872	53621929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_53622630_53626367
Isoform_15139_103	chr13	-	2306	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	30	-1	7	1	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGTCTAAAGTTACTAT	NA	False	NA	-2	True	AATAAA	-16	NA	54616632	54606648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
Isoform_1514_59	chr10	-	832	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	179	214	-5	-214	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGCCCAGCACTTGA	5627	False	NA	1	True	NA	NA	NA	80736624	80735497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80736094_80736315_80736385_80736457
Isoform_15144_564	chr13	-	2642	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	79	6	0	-1	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713169	54699036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
Isoform_15146_67	chr13	-	2523	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	-22	1	0	-1	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713138	54699036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
Isoform_15149_11	chr13	-	2166	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-48	-1172	-25	-1	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713194	54699036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
Isoform_15151_491	chr13	-	1088	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	18	650	-14	-299	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACTAGGTGGGTTTTT	NA	False	NA	-25	True	GATAAA	-20	NA	54737885	54732647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
Isoform_15152_58	chr13	-	1177	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	18	561	-14	-210	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTGTTTACTGTG	NA	False	NA	-3	True	ATTAAA	-15	NA	54737885	54732558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
Isoform_15157_108	chr13	-	2161	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	25	0	-25	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGTATTACTGGATTAA	7405	False	NA	-6	True	AATAAA	-16	NA	54759157	54740238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_15159_4	chr13	-	2253	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	-67	0	67	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAGAGTTGGAGTT	7405	False	NA	86	True	NA	NA	NA	54759157	54740146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_15162_15	chr13	-	1669	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-32	549	-32	-549	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGGCTGCCTTAGA	7373	False	NA	NA	False	NA	NA	NA	54759189	54740762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
Isoform_15163_4	chr13	-	3053	2	ISM	ENSMUSG00000047547.15	ENSMUST00000146301.2	3174	4	-15	7828	-15	-7828	5prime_fragment	FALSE	canonical	3	422	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAACCCAAC	7442	False	NA	NA	False	NA	NA	NA	54759120	54751680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_54754504_54758890
Isoform_15169_3	chr13	-	3750	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	176	15	22	0	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGCTGCCCAAGCTGC	NA	False	NA	-20	True	AATAAA	-13	NA	54835445	54827226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
Isoform_15170_7	chr13	-	3720	11	FSM	ENSMUSG00000034928.17	ENSMUST00000128257.8	1689	11	134	-2165	-31	-1	multi-exon	FALSE	canonical	3	111	junction_10	190.55762907845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTGGCTGCTCTC	NA	False	NA	-6	True	AATAAA	-27	NA	54835938	54827212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
Isoform_15171_7	chr13	-	3769	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	-35	0	25	0	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841695	54827222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
Isoform_15172_3	chr13	-	3804	11	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	200.392015809014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCCAAGCTGCCT	NA	False	NA	-18	True	AATAAA	-15	NA	54841665	54827224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54841541
Isoform_15174_33	chr13	-	1317	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914374	54906672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
Isoform_15175_33	chr13	-	2523	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	10	398	10	17	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGAAGTGTTTTTTTT	NA	False	NA	NA	False	AATATA	-29	NA	55248098	55176090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_15176_43	chr13	-	2467	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	60	404	19	11	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATAGATGGAAGTGTT	NA	False	NA	NA	False	AATATA	-23	NA	55248048	55176096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_15177_5	chr13	-	2400	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	19	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	49.8302443746553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAATAGATGGAAGT	NA	False	NA	NA	False	AATATA	-20	NA	55248048	55176099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55176532_55177228_55177272_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_15178_4	chr13	-	590	4	FSM	ENSMUSG00000025878.17	ENSMUST00000133187.2	2735	4	17	2128	13	193	multi-exon	FALSE	canonical	3	148	junction_3	8.65383665716478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCATGTTGCTGATTA	NA	False	NA	NA	False	AATAAA	-23	NA	55248095	55225076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55225341_55233422_55233508_55240939_55241095_55248009
Isoform_1518_24	chr10	-	592	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	-57	7	-57	-7	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCGTGTCACCTCAC	5575	False	NA	-14	True	AATAAA	-18	NA	80736676	80735744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80736094_80736315_80736385_80736502
Isoform_15180_199	chr13	-	1182	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-1	-13	0	8	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTGTCAAAACACCTAG	6441	False	NA	-9	True	AATAAA	-27	NA	55469759	55467684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_15182_27	chr13	-	1437	6	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	480	junction_5	51.3949413853153	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTGTGTGCACTGGG	6441	False	NA	-24	True	AATAAA	-12	NA	55469759	55467699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202
Isoform_15183_127	chr13	-	1361	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGTGCACTGGGTGT	6441	False	NA	-21	True	AATAAA	-15	NA	55469759	55467696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_15184_16	chr13	-	1191	8	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	193.89077505921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55468050_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
Isoform_15185_4	chr13	-	1954	2	NIC	ENSMUSG00000034789.9	novel	1592	5	NA	NA	-19	1	intron_retention	FALSE	canonical	3	639	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGTGCACTGGGTGT	6422	False	NA	-21	True	AATAAA	-15	NA	55469778	55467696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55468188_55468315
Isoform_15186_13	chr13	-	1026	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-11	312	-11	2	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTCCATGGTTTTG	6144	False	NA	-1	True	ATTAAA	-14	NA	55477582	55473292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
Isoform_15187_4	chr13	-	1340	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-12	-1	-12	1	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGTACAGTCTATCACCT	6143	False	NA	-6	True	NA	NA	NA	55477583	55472979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
Isoform_15191_52	chr13	-	3136	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	170	1009	-2	-1009	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTTAAATGGTGTT	3009	False	NA	-18	True	TTTAAA	-17	NA	55510426	55492654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_15193_26	chr13	-	2784	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-32	1563	-32	1197	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGGCTGATGGTCTCT	2807	False	NA	0	True	AATAAA	-17	NA	55510628	55493208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_15194_178	chr13	-	2583	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	170	1562	-2	1198	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGGCTGATGGTCTCTG	3009	False	NA	1	True	AATAAA	-18	NA	55510426	55493207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_15198_28	chr13	-	4140	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	170	5	-2	-5	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTGTGAGTTGTGTGC	3009	False	NA	-8	True	NA	NA	NA	55510426	55491650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_152_7	ERCC-00157	+	999	1	FSM	ERCC-00157A	DQ839618	1003	1	2	2	2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TC	NA	False	NA	NA	False	NA	NA	NA	2	1001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00157_+_0_1000
Isoform_1520_485	chr10	-	3368	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	3	-1	3	1	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	0	True	AATAAA	-18	NA	80754076	80737196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
Isoform_15202_527	chr13	-	1234	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	172	2909	0	-149	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGCCCAGCTGAGA	3011	False	NA	-3	True	ATTAAA	-17	NA	55510424	55494554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_15204_85	chr13	-	1436	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-33	2912	-33	-152	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTTGCCCAGCTG	2806	False	NA	-6	True	ATTAAA	-14	NA	55510629	55494557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
Isoform_15206_52	chr13	-	2595	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	51	294	1	221	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGGGACCCTTCCCCT	NA	False	NA	-22	True	AATAAA	-18	NA	55635873	55621535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_15210_6	chr13	-	2704	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	-58	294	-58	221	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGGGACCCTTCCCCT	NA	False	NA	-22	True	AATAAA	-18	NA	55635982	55621535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_15211_13	chr13	-	2938	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	3	-1	3	1	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGGCCTGCTGCTCTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	55635921	55621240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_15212_4	chr13	-	2988	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	-48	0	-48	0	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	55635972	55621241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_15216_12	chr13	-	2648	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-48	-222	2	222	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCTTCCCCTT	NA	False	NA	-21	True	AATAAA	-19	NA	55635922	55621534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_15219_4	chr13	-	2939	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-46	-515	4	0	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	55635920	55621241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
Isoform_1522_21	chr10	-	3437	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	3	1	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3114	False	NA	0	True	AATAAA	-18	NA	80754076	80737196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
Isoform_15220_50	chr13	-	1687	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	12	-2	0	-2	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661247	55646226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_15221_3	chr13	-	2613	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	9	-925	0	-1	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTAGTCTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	55661250	55645303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_15222_3	chr13	-	1018	9	NIC	ENSMUSG00000021493.16	novel	899	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	59.3073298589643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661247	55654586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_15223_64	chr13	-	1002	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	4	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	-2	True	AATAAA	-17	NA	55661247	55654585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_15224_12	chr13	-	882	7	NIC	ENSMUSG00000021493.16	novel	899	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	53.4716955241016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661247	55654586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55654937_55655142_55655180_55655300_55655438_55656592_55656624_55656704_55656857_55660124_55660232_55661179
Isoform_15226_1441	chr13	-	2071	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	128	0	-9	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684343	55678228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
Isoform_15229_17	chr13	-	2150	16	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	642	junction_9	44.9204729370572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684343	55678230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
Isoform_15237_3	chr13	-	1921	5	NIC	ENSMUSG00000021495.11	novel	4786	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	62.8589691293136	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718934	55687131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55718587
Isoform_15238_14	chr13	-	2300	3	FSM	ENSMUSG00000021506.8	ENSMUST00000021968.7	2451	3	150	1	150	-1	multi-exon	FALSE	canonical	2	5	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGAGCCCTAGCTGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	55979088	55972864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_55974425_55976252_55976489_55978584
Isoform_15243_474	chr13	-	1895	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6050	False	NA	-8	True	AGTAAA	-15	NA	56283299	56221434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
Isoform_15250_293	chr13	-	1934	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	109	3	8	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6014	False	NA	-8	True	AGTAAA	-15	NA	56283335	56221434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
Isoform_15257_15	chr13	-	888	6	FSM	ENSMUSG00000015937.16	ENSMUST00000139511.8	889	6	6	-5	6	5	multi-exon	FALSE	canonical	3	56	junction_1	455.76511494409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTGGAAATGAGAATTG	6012	False	NA	-8	True	AATAAA	-20	NA	56283337	56243363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_56243455_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
Isoform_15259_20	chr13	-	1684	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	140	3	-106	-3	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTACTCCTGGGCT	NA	False	NA	-1	True	AATAAA	-19	NA	56444224	56436458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
Isoform_1526_12	chr10	-	3362	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	-5	5	-5	0	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTCGACTCTAAAT	4439	False	NA	-5	True	AATAAA	-14	NA	80850764	80784462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
Isoform_15260_24	chr13	-	646	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	163	1018	-83	-1018	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGGGTCAGTTTTTACA	NA	False	NA	NA	False	NA	NA	NA	56444201	56437473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
Isoform_15261_456	chr13	-	3655	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	23	8	-11	-1	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTTGGTTGTCTCGCCT	1750	False	NA	-10	True	AATAAA	-12	NA	58363444	58323977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
Isoform_15267_259	chr13	-	3568	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-4	-3	-4	3	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTGTCTCGCCTCTTT	1757	False	NA	-6	True	AATAAA	-16	NA	58363437	58323973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
Isoform_1527_5	chr10	-	3683	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	106	7	-12	-4	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873154	80864378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
Isoform_15273_10	chr13	-	1513	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	6	4	6	-4	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTGATCTTCAC	NA	False	NA	-2	True	AATAAA	-18	NA	58421996	58381163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
Isoform_15275_371	chr13	-	1169	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	17	1865	17	-1865	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGGTGCACGCCTTT	NA	False	NA	-17	True	TATAAA	-19	NA	58533022	58529495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_15276_22	chr13	-	2810	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	8	233	8	-233	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTAAAAATACAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	58533031	58527863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_15278_22	chr13	-	1421	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	10	1620	10	-1620	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCATGTCTTCAGTTG	NA	False	NA	-4	True	NA	NA	NA	58533029	58529250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
Isoform_1528_9	chr10	-	3639	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	150	7	6	-4	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873110	80864378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
Isoform_1529_5	chr10	-	1444	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	95	2257	-23	-2254	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTGGCCATGTCA	NA	False	NA	-3	True	TTTAAA	-23	NA	80873165	80866628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
Isoform_15290_211	chr13	-	1926	16	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	1429	junction_15	1716.40976718524	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5131	False	NA	-7	True	AATAAA	-12	NA	58549950	58539765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_15296_1570	chr13	-	1979	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	711	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_15297_98	chr13	-	2782	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	-92	0	-5	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGGGGTTTTGTGTGT	4751	False	NA	-13	True	AATACA	-10	NA	58550330	58538960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_15298_349	chr13	-	2697	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	-7	0	3	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTGCCCAATTTGAAAA	4751	False	NA	-16	True	AATAAA	-22	NA	58550330	58539045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_153_26	ERCC-00160	+	724	1	FSM	ERCC-00160A	DQ883658	727	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GG	NA	False	NA	NA	False	NA	NA	NA	1	725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00160_+_0_700
Isoform_1531_7	chr10	-	3692	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	-17	5	-17	-4	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	80873159	80864378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
Isoform_15333_292	chr13	-	1968	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	25	711	0	0	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5151	False	NA	-5	True	AATAAA	-14	NA	58549930	58539763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_15335_71	chr13	-	2705	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	5	-6	5	2	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTGCCCAATTTGAAA	5131	False	NA	-17	True	AATAAA	-21	NA	58549950	58539046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
Isoform_15341_1947	chr13	-	2039	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	715	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_15342_392	chr13	-	2754	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4751	False	NA	-19	True	AATAAA	-19	NA	58550330	58539048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_15343_126	chr13	-	2842	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	-88	0	-5	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGGGGTTTTGTGTGT	4751	False	NA	-13	True	AATACA	-10	NA	58550330	58538960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_1536_89	chr10	-	2142	12	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	4	4	combination_of_known_junctions	TRUE	canonical	3	99	junction_11	260.894741448927	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4810	False	NA	-7	True	AATAAA	-21	NA	80895974	80879904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
Isoform_15360_66	chr13	-	1967	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	-52	711	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
Isoform_15366_7	chr13	-	3691	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	-5	3	-5	-3	multi-exon	FALSE	canonical	3	5	junction_10	200.252240936275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTTAGGGTTGTTTGG	NA	False	NA	-8	True	AATAAA	-19	NA	59823599	59782812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
Isoform_15367_356	chr13	-	3543	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	40	371	1	-1	multi-exon	TRUE	canonical	3	421	junction_9	46.3947102135844	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59823585	59782810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
Isoform_15368_84	chr13	-	3572	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	11	371	11	-1	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59823614	59782810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
Isoform_1537_717	chr10	-	1951	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	19	-6	-15	4	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4791	False	NA	-7	True	AATAAA	-21	NA	80895993	80879904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
Isoform_1538_246	chr10	-	1975	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-5	-6	-2	4	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4767	False	NA	-7	True	AATAAA	-21	NA	80896017	80879904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
Isoform_15380_205	chr13	-	1901	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	34	7	0	-2	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTAGTGGTTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	59917590	59903229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
Isoform_15382_11	chr13	-	629	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	-6	1319	-6	34	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAGCCAATGTGGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	59917630	59904541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
Isoform_15383_3	chr13	-	4633	26	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	15	-9657	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	21.7915947098876	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAGAAAAAAGAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	59970913	59930104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
Isoform_15386_4	chr13	-	2199	5	NNC	ENSMUSG00000094942.8	novel	2310	4	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.9946115683587	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGTGTGGATCAG	NA	False	NA	-15	True	NA	NA	NA	62530976	62516144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_62517777_62517869_62518166_62519376_62519438_62519623_62519751_62530893
Isoform_15387_36	chr13	-	1588	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	12	-967	12	419	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564845	62549887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
Isoform_15388_6	chr13	-	932	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-29	-270	-29	270	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGAAACCCAATGAATGT	NA	False	NA	NA	False	NA	NA	NA	62564886	62550584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
Isoform_15391_5	chr13	-	2464	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	False	NA	0	True	AATAAA	-19	NA	62832766	62819598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
Isoform_15392_8	chr13	-	2489	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-52	-1822	-25	-3	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTTCCTGGGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	62832784	62819600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
Isoform_15394_3	chr13	-	2389	4	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	78.7950929098168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGGGTGCATATTTG	6810	False	NA	-3	True	ATTAAA	-18	NA	62860565	62847218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62860451
Isoform_15395_40	chr13	-	1322	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	26	6	26	-6	multi-exon	FALSE	canonical	3	121	junction_2	7.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTCTTGTTATGGGT	NA	False	NA	-4	True	AATAAA	-14	NA	63006210	62984696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
Isoform_15399_12	chr13	-	2654	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	36.5910735927038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579518	63459948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
Isoform_154_19	ERCC-00162	+	505	1	FSM	ERCC-00162A	DQ516750	507	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00162_+_0_500
Isoform_1540_23	chr10	-	2143	12	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	99	junction_11	332.810024483479	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	4810	False	NA	-9	True	AATAAA	-19	NA	80895974	80879906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895751
Isoform_15400_27	chr13	-	2921	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-24	214	-3	1	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGACCTTCCTACTCC	NA	False	NA	-5	True	AATAAA	-19	NA	63579562	63459566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_15401_96	chr13	-	2495	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	19	597	-11	-1	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579519	63459949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_15403_3	chr13	-	2383	15	NNC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	140	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	31.2524284770686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGAGTGAGTCCTTGT	NA	False	NA	-7	True	AGTAAA	-12	NA	63578929	63459954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63578780
Isoform_15404_6	chr13	-	2544	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	30.5478046240141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGAGTGAGTCCTTGT	NA	False	NA	-7	True	AGTAAA	-12	NA	63579534	63459954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
Isoform_15405_3	chr13	-	2958	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	-1	1	intron_retention	TRUE	canonical	2	5	junction_14	30.5478046240141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGACCTTCCTACTCC	NA	False	NA	-5	True	AATAAA	-19	NA	63579560	63459566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
Isoform_15406_6	chr13	-	2338	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-51	1	0	-1	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579559	63459949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
Isoform_15407_3	chr13	-	2717	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-50	-379	1	-1	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTCAGACCTTCCTAC	NA	False	NA	-8	True	AATAAA	-16	NA	63579558	63459569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
Isoform_15408_12	chr13	-	2136	12	NIC	ENSMUSG00000021461.18	novel	2288	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_11	34.1096917954438	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579536	63459948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63579263
Isoform_15409_4	chr13	-	2417	14	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	35.1308627106267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579554	63459948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63545896_63545992_63548047_63548133_63550655_63550853_63579263
Isoform_1541_203	chr10	-	1964	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	5	0	5	0	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4777	False	NA	-11	True	AATAAA	-17	NA	80896007	80879908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
Isoform_15410_6	chr13	-	2276	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	27	0	2	0	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	-1	True	NA	NA	NA	64277142	64244121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
Isoform_15411_11	chr13	-	1458	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	15	830	-4	3	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGATATTACAGTATG	NA	False	NA	NA	False	AATAAA	-22	NA	64277154	64244951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
Isoform_15412_6	chr13	-	3500	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	23	9	23	-9	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAAGTACATGGGTC	6073	False	NA	NA	False	AATAAA	-17	NA	64300993	64280840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
Isoform_15414_3	chr13	-	2791	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	131	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	22.1833730712064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64396325	64343171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_15416_4	chr13	-	3113	15	NIC	ENSMUSG00000033102.16	novel	3052	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	9643	False	NA	NA	False	NA	NA	NA	64422835	64343173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_15418_6	chr13	-	3024	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9669	False	NA	NA	False	NA	NA	NA	64422809	64343170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_15420_4	chr13	-	2783	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	104	-1	104	1	multi-exon	FALSE	canonical	3	22	junction_2	22.3145877936915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64396352	64343170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
Isoform_15422_8	chr13	-	3055	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-9	2813	-9	0	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9667	False	NA	NA	False	NA	NA	NA	64422811	64343171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
Isoform_15423_31	chr13	-	3004	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-17	24	-17	-3	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAAATTTTTTGTTTG	NA	False	NA	-24	True	AATAAA	-24	NA	64460541	64437634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_15425_18	chr13	-	1683	7	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	-29	696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.0016339672969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTGTGGTGAAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	64460553	64438944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_64439851_64439873_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_15429_4	chr13	-	1544	6	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	-19	699	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5139988123228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGTGGTGAAAGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	64460543	64438941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_64439851_64439873_64440043_64456635_64456742_64456906_64456961_64460080_64460150_64460306
Isoform_15432_236	chr13	-	1442	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-53	582	-53	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518173	64511609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
Isoform_15433_975	chr13	-	1388	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	583	0	-583	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGACTTCAGTGTGTA	NA	False	NA	-7	True	AATAAA	-21	NA	64518120	64511610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
Isoform_15439_144	chr13	-	3335	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	24	473	7	10	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATTTCTGTCATTGC	NA	False	NA	-5	True	AATAAA	-27	NA	65260765	65212949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_15440_65	chr13	-	3434	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	24	374	7	109	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTAAGTTTCT	NA	False	NA	-8	True	ATTAAA	-12	NA	65260765	65212850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_15442_14	chr13	-	2174	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	-7	1665	-7	248	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATGTTGGTGGTAGG	NA	False	NA	NA	False	AATAGA	-1	NA	65260796	65214141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
Isoform_15444_3	chr13	-	3546	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	3	2	0	1	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTCTACTGACTTCTA	NA	False	NA	-15	True	ATTAAA	-16	NA	65353779	65324932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
Isoform_15445_9	chr13	-	2931	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	-2	27225	-2	-26990	5prime_fragment	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	66549934	66526202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_66529024_66549824
Isoform_15447_6	chr13	-	1184	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	343	-8	-21	2	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAACTGTTTTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	66667608	66651221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
Isoform_15449_4	chr13	-	1067	3	FSM	ENSMUSG00000097483.3	ENSMUST00000181516.2	1094	3	25	2	25	-2	multi-exon	FALSE	canonical	3	13	junction_1	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAAGAACTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	66667562	66651225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_66652035_66653161_66653268_66667410
Isoform_15450_3	chr13	-	516	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11617	-2273	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	69.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4352	False	NA	NA	False	NA	NA	NA	66900994	66888707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_66889043_66889243_66889330_66900899
Isoform_15451_20	chr13	-	457	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	7	0	-7	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCATACTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	66950624	66941422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
Isoform_15453_1905	chr13	-	501	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	53	-19	53	19	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	1905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAACGCCTACTGTCAT	7765	False	NA	-6	True	AATAAA	-37	NA	67053389	67048661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
Isoform_15454_3	chr13	-	1389	8	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	116.048898912379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGTATCAGCAACTAAT	424	False	NA	NA	False	AATAAA	-20	NA	67081105	67055029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_15455_3	chr13	-	1418	8	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	109.238178270405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	426	False	NA	NA	False	AATAAA	-11	NA	67081103	67060188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_15456_3	chr13	-	1390	8	FSM	ENSMUSG00000021519.12	ENSMUST00000173158.8	1415	8	26	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_6	120.714539306581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	424	False	NA	NA	False	AATAAA	-11	NA	67081105	67060188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
Isoform_15457_86	chr13	-	1425	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	47	7	0	1	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	424	False	NA	NA	False	AATAAA	-11	NA	67081105	67060188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_15461_8	chr13	-	2370	4	FSM	ENSMUSG00000021519.12	ENSMUST00000174011.8	2353	4	-16	-1	13	1	multi-exon	FALSE	canonical	3	328	junction_2	10.2306728354819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGTCATTACTGTTT	411	False	NA	NA	False	AATAAA	-16	NA	67081118	67069251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67071010_67076233_67076387_67077948_67078288_67080998
Isoform_15463_5	chr13	-	1478	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	7	1849	-3	906	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTGTGATAAAGCCT	NA	False	NA	-24	True	NA	NA	NA	67569530	67555676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
Isoform_15465_13	chr13	-	2367	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	23	1	23	-1	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTCTTTGGTCATGCC	NA	False	NA	-2	True	NA	NA	NA	67648651	67638287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
Isoform_15466_8	chr13	-	2330	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	-32	2	20	-1	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTCTTTGGTCATGCC	NA	False	NA	-2	True	NA	NA	NA	67648654	67638287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
Isoform_15467_35	chr13	-	2628	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	26	2	-5	-2	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTGGTCATAGTGTT	9248	False	NA	NA	False	NA	NA	NA	67674270	67663901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
Isoform_15468_7	chr13	-	4007	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	689	597	-3	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701260	67687356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
Isoform_15469_3	chr13	-	3597	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	-9	-2485	-9	-395	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAATTCAAACTGGAGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	67872454	67853822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
Isoform_15471_3	chr13	-	2224	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	85	3	3	-3	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCAGTATTGTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	67903262	67895921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
Isoform_15478_16	chr13	-	3368	16	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	15	76	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	121.716318635679	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730198	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729921_68730023_68730059
Isoform_1548_216	chr10	-	2352	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	202	17	-7	-17	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCGGCATCTGAACAT	NA	False	NA	-15	True	AATAAA	-20	NA	81003555	80989116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
Isoform_15481_142	chr13	-	3188	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-3	507	-3	76	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730243	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_15483_158	chr13	-	3107	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-3	588	-3	-5	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAAAACAAAAAAAAA	NA	False	NA	-95	True	NA	NA	NA	68730243	68709486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_15487_10	chr13	-	3039	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-8	76	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730248	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
Isoform_15489_17	chr13	-	2958	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAAAACAAAAAAAAA	NA	False	NA	-95	True	NA	NA	NA	68730248	68709486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
Isoform_15496_39	chr13	-	2820	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-16	-76	-8	76	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730248	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
Isoform_155_4	ERCC-00163	+	526	1	FSM	ERCC-00163A	DQ668359	527	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00163_+_0_500
Isoform_15500_8	chr13	-	2664	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-6	76	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730246	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
Isoform_15501_17	chr13	-	2585	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAAAACAAAAAAAAA	NA	False	NA	-95	True	NA	NA	NA	68730248	68709486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
Isoform_15503_7	chr13	-	2382	11	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-7	76	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	114.767983340303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTGCTATTGT	NA	False	NA	-14	True	AATAAA	-8	NA	68730247	68709405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68730183
Isoform_15506_3	chr13	-	2558	5	NNC	ENSMUSG00000021594.12	novel	2644	5	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.2474487139159	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATTGTTTGTCTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	69759477	69721568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_69723316_69734703_69734854_69743034_69743137_69748349_69748517_69759085
Isoform_15508_3	chr13	-	3009	7	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	34294	-4	-775	2	3prime_fragment	FALSE	canonical	3	141	junction_2	15.4569294061488	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGATTGTTTTATGT	NA	False	NA	-5	True	AATAAA	-23	NA	70751459	70736811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297
Isoform_15509_3	chr13	-	341	2	ISM	ENSMUSG00000034525.8	ENSMUST00000222568.2	3903	12	-186	17674	-186	-17674	5prime_fragment	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAATTATTAATACA	NA	False	NA	NA	False	AATGAA	-26	NA	70785939	70772548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_70772586_70785635
Isoform_15510_51	chr13	-	540	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	-3	-3	0	-2	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476574	73467994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
Isoform_15511_585	chr13	-	479	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	87	2	0	-2	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476574	73467994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
Isoform_15514_7	chr13	-	1296	3	FSM	ENSMUSG00000113346.3	ENSMUST00000223470.3	1306	3	11	-1	11	1	multi-exon	FALSE	canonical	3	37	junction_2	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCTGAGTTCAAATCCC	NA	False	NA	1	True	NA	NA	NA	73495492	73492782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_73493358_73494614_73495181_73495337
Isoform_15515_6	chr13	-	1305	3	NNC	ENSMUSG00000113346.3	novel	1306	3	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGGTCCTGAGTTCAAAT	NA	False	NA	-2	True	NA	NA	NA	73495499	73492785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_73493358_73494614_73495181_73495332
Isoform_15516_10	chr13	-	2435	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	1562	0	-402	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCGGTGGGTAGTGTA	NA	False	NA	NA	False	ATTAAA	-10	NA	73995731	73968214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
Isoform_15517_12	chr13	-	1955	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	2042	0	-882	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATGTTGTAAAGTCAG	NA	False	NA	NA	False	AATAGA	-23	NA	73995731	73968694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
Isoform_1552_38	chr10	-	2400	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	147	24	-62	-24	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGTCAGTCCGGCATC	NA	False	NA	-22	True	AATAAA	-13	NA	81003610	80989123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
Isoform_15520_137	chr13	-	2247	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	40	1112	40	-1	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTATTTTTATTCTA	NA	False	NA	-21	True	ATTAAA	-13	NA	74085863	74060577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_15521_16	chr13	-	2477	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-185	1107	-185	4	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTATTCTAACGTC	NA	False	NA	-16	True	ATTAAA	-18	NA	74086088	74060572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
Isoform_15525_31	chr13	-	2511	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-2	1132	-2	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_15527_4	chr13	-	3090	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-313	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTAGTTGAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	74210420	74184931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_15528_43	chr13	-	2271	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_15530_40	chr13	-	2334	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_15533_7	chr13	-	3536	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	100	junction_7	14.9946657181812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210420	74185750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
Isoform_15536_17	chr13	-	3211	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	42	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7215	False	NA	-4	True	ATTAAA	-18	NA	74356786	74320110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
Isoform_15537_201	chr13	-	2408	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	9	2505	9	6	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTGGTGTGATGTCA	7182	False	NA	-5	True	ATTAAA	-17	NA	74356819	74320111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
Isoform_15538_5	chr13	-	4603	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	2	317	2	-317	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCTAGAGCTCTGCCT	7175	False	NA	-10	True	AATAAA	-13	NA	74356826	74317923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
Isoform_15543_210	chr13	-	1054	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	71	6	-34	2	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTAGTTTTGGCTGGTTT	NA	False	NA	-5	True	AATAAA	-19	NA	74465369	74451633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_15544_3	chr13	-	1161	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	-40	10	-40	-2	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTAGTTTTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	74465480	74451637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_15545_34	chr13	-	1055	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	319	2	23	-2	multi-exon	FALSE	canonical	3	148	junction_2	263.104085867172	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTAGTTTTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	74465380	74451637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
Isoform_15548_880	chr13	-	2842	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	58	0	13	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498341	74470372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
Isoform_15550_36	chr13	-	2866	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	34	0	-7	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498365	74470372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
Isoform_15560_4	chr13	-	2875	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	5	1273	5	827	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	74538950	74518717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
Isoform_15562_3	chr13	-	3066	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	13	-1673	13	1673	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCTGCTGTGATCACT	NA	False	NA	NA	False	AATAAA	-18	NA	74642076	74626499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
Isoform_15563_7	chr13	-	2012	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-34	-1583	-34	1583	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	74670614	74656133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
Isoform_15564_10	chr13	-	3305	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	258	-2192	8	0	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5226	False	NA	-5	True	NA	NA	NA	74765421	74753063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
Isoform_15565_6	chr13	-	3710	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	-151	-2188	-9	-4	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGCCATGGTCATGA	4817	False	NA	-9	True	NA	NA	NA	74765830	74753067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
Isoform_15566_3	chr13	-	2780	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	93	1892	6	-5	multi-exon	TRUE	canonical	3	102	junction_28	16.6207701385947	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCCTGCCTGAAC	NA	False	NA	NA	False	AATAAA	-40	NA	74918762	74842378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
Isoform_15567_4	chr13	-	5004	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	-34	10	24	-10	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	6612	False	NA	NA	False	AATAAA	-10	NA	76092020	76017665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
Isoform_15568_5	chr13	-	4959	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	12	9	12	-9	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAGTTCAATGAAG	6658	False	NA	NA	False	AATAAA	-11	NA	76091974	76017664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
Isoform_15569_8	chr13	-	1569	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	2	1236	2	-4	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTAAAGTAATTTTG	NA	False	NA	-13	True	NA	NA	NA	76166679	76150889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
Isoform_15570_8	chr13	-	1076	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	108	252	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166681	76150890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
Isoform_15571_4	chr13	-	1138	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	46	252	46	-5	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166743	76150890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
Isoform_15572_3	chr13	-	610	4	FSM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	-20	5	-20	-5	multi-exon	FALSE	canonical	2	9	junction_3	32.0555074137902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	76166858	76150890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166776
Isoform_15574_5	chr13	-	1000	7	ISM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-13	61447	-13	-1	5prime_fragment	FALSE	canonical	3	79	junction_1	18.4842275106824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAAATTTCACAAATTAA	NA	False	NA	NA	False	AATACA	-27	NA	77283605	77252653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
Isoform_15575_4	chr13	-	2614	9	FSM	ENSMUSG00000069170.15	ENSMUST00000128585.9	2580	9	-7	-27	-5	27	multi-exon	FALSE	canonical	3	10	junction_1	12.4172259381876	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTGTGGTTTCTTA	2365	False	NA	NA	False	AATAAA	-24	NA	81781265	81725527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
Isoform_15576_196	chr13	-	3044	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	11	-1	0	1	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATTTGCAGTGAACAT	NA	False	NA	-5	True	AATAAA	-19	NA	81859121	81821960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
Isoform_15577_6	chr13	-	3354	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	-299	-1	-299	1	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATTTGCAGTGAACAT	NA	False	NA	-5	True	AATAAA	-19	NA	81859431	81821960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
Isoform_15582_6	chr13	-	800	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	-57	-10	0	10	multi-exon	FALSE	canonical	3	281	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTGCCATTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	81859121	81842391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_81842897_81847862_81848013_81858976
Isoform_15584_32	chr13	-	382	3	FSM	ENSMUSG00000017778.15	ENSMUST00000017922.9	315	3	8	-75	8	1	multi-exon	FALSE	canonical	3	419	junction_2	5048	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCAATGCCTCGTCTC	NA	False	NA	-18	True	AATAAA	-12	NA	86194885	86192938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_86193028_86193845_86193973_86194719
Isoform_15585_1979	chr13	-	422	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	114	4	-16	1	multi-exon	FALSE	canonical	3	10515	junction_1	2196	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCAATGCCTCGTCTC	NA	False	NA	-18	True	AATAAA	-12	NA	86194909	86192938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_86193028_86193845_86193989_86194719
Isoform_15589_4	chr13	-	2504	7	ISM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-287	36243	-100	18100	5prime_fragment	TRUE	canonical	3	34	junction_1	10.5264217830921	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAAAAATAAAATCT	2506	False	NA	NA	False	NA	NA	NA	89890728	89840701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
Isoform_15590_5	chr13	-	2401	7	ISM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-186	36245	1	18098	5prime_fragment	FALSE	canonical	3	34	junction_1	10.5264217830921	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAATAAAAATAAAAT	2607	False	NA	NA	False	NA	NA	NA	89890627	89840703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
Isoform_15591_3	chr13	-	2056	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-246	12950	-55	1258	5prime_fragment	FALSE	canonical	3	54	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAGTTAAAAAG	2551	False	NA	NA	False	NA	NA	NA	89890683	89872294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_89873783_89879577_89879654_89890191
Isoform_15592_3	chr13	-	1506	8	NIC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	49.108792180095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGTTATTTAACTGA	NA	False	NA	-6	True	AATAAA	-15	NA	90237205	89997038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237128
Isoform_15593_17	chr13	-	1469	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	72	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGTTATTTAACTGA	NA	False	NA	-6	True	AATAAA	-15	NA	90237655	89997038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
Isoform_15594_3	chr13	-	1107	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	0	476	0	37	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGAGCAATGGATTAT	NA	False	NA	NA	False	AATAAA	-35	NA	91372087	91083950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
Isoform_15596_5	chr13	-	1239	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6063	36	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGGAGCAATGGATTA	4943	False	NA	NA	False	AATAAA	-34	NA	91366015	91083951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
Isoform_15598_28	chr13	-	1532	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	9	0	9	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955815	91944651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
Isoform_156_108	ERCC-00165	+	855	1	FSM	ERCC-00165A	DQ668363	856	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00165_+_0_900
Isoform_15601_3	chr13	-	834	3	ISM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	37	35632	37	-8953	5prime_fragment	FALSE	canonical	3	28	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTAAAGGATAAAATTA	NA	False	NA	NA	False	AATATA	-11	NA	92667339	92659247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_92659840_92660737_92660847_92667206
Isoform_15602_27	chr13	-	1968	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-15	1128	-15	208	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGTATTTTTGAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	93328908	93283917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_15603_7	chr13	-	3106	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-25	0	-25	0	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328918	93282789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_15604_4	chr13	-	2064	16	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-27	216	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	152.863977298628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGAAAATGTTTACA	NA	False	NA	NA	False	AATAAA	-21	NA	93328920	93283909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
Isoform_15605_24	chr13	-	3147	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-156	-1	-54	0	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328947	93282789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_15607_56	chr13	-	1974	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-108	1124	-6	211	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTATTTTTGAAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	93328899	93283914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
Isoform_15613_8	chr13	-	2359	6	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	-12	23296	-12	10180	5prime_fragment	TRUE	canonical	0	0	junction_3	1.01980390271856	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAGTATTGAAATC	1475	False	NA	NA	False	AAGAAA	-13	NA	93636328	93589904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_93590084_93590435_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
Isoform_15614_10	chr13	-	2218	5	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	-51	23828	-51	9648	5prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTGTGCATTTAACC	1436	False	NA	NA	False	NA	NA	NA	93636367	93590436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
Isoform_15616_6	chr13	-	1954	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	315	221	-80	-221	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTTTGTGGTCCAT	NA	False	NA	NA	False	AATAAA	-25	NA	93774154	93753403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
Isoform_15618_129	chr13	-	3226	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	17	6	-1	-6	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATATTGGTCTTCTTTGT	NA	False	NA	21	True	AATAAA	-44	NA	95511843	95487196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
Isoform_1562_471	chr10	-	576	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	20	8	10	-8	multi-exon	FALSE	canonical	3	958	junction_1	11.5	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCACATGTGTGTCAT	3114	False	NA	-8	True	AATAAA	-21	NA	81102748	81100554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81100832_81101484_81101642_81102606
Isoform_15624_142	chr13	-	2739	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	2	0	2	0	multi-exon	FALSE	canonical	3	40	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9828	False	NA	NA	False	AATAAA	-16	NA	95661733	95648239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95650790_95661544
Isoform_15625_23	chr13	-	2802	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-60	-1	-60	1	multi-exon	FALSE	canonical	3	40	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGTTC	9766	False	NA	NA	False	AATAAA	-17	NA	95661795	95648238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95650790_95661544
Isoform_15628_3	chr13	-	2921	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-179	-1	-179	1	multi-exon	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGTTC	9647	False	NA	NA	False	AATAAA	-17	NA	95661914	95648238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95650790_95661544
Isoform_15629_3	chr13	-	2702	2	NNC	ENSMUSG00000021678.10	novel	2741	2	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9623	False	NA	NA	False	AATAAA	-16	NA	95661938	95648239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_95650790_95661786
Isoform_1563_3	chr10	-	2268	16	ISM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	10337	-1	-813	1	3prime_fragment	TRUE	canonical	3	101	junction_15	18.2598527437168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	NA	False	NA	9	True	AATAAA	-28	NA	81116764	81109039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599
Isoform_15630_63	chr13	-	3335	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	19	-18	19	18	multi-exon	FALSE	canonical	3	48	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAGATTGTTCCTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	95754976	95738292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95741446_95754794
Isoform_15631_6	chr13	-	5915	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-71	3	-71	-3	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028574	95763684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
Isoform_15639_4	chr13	-	3838	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-25	412	-25	-412	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTTCAAAACACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	96679018	96617609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
Isoform_1564_81	chr10	-	3000	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	33.8096140173176	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	7826	False	NA	9	True	AATAAA	-28	NA	81121629	81109039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
Isoform_15643_139	chr13	-	4364	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	63	-2	2	2	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAAGCAGTGGCTTT	NA	False	NA	-3	True	AGTAAA	-24	NA	96807381	96785472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
Isoform_15646_84	chr13	-	4386	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	41	-2	-20	2	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAAGCAGTGGCTTT	NA	False	NA	-3	True	AGTAAA	-24	NA	96807403	96785472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
Isoform_1565_54	chr10	-	2995	21	FSM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	30	-1	-22	1	multi-exon	FALSE	canonical	3	41	junction_20	26.4920271025077	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	7327	False	NA	9	True	AATAAA	-28	NA	81127071	81109039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
Isoform_15656_11	chr13	-	2658	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	36	6	-28	-6	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTTTTGTGTGGTCT	NA	False	NA	NA	False	AATAAA	-8	NA	97274409	97265937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_15657_197	chr13	-	1064	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	68	1568	4	-8	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTTAGTTTGGGGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	97274377	97267499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_15658_11	chr13	-	1133	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	54	1513	-10	47	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAGGACACAGAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	97274391	97267444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
Isoform_15669_1297	chr13	-	1792	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	27	86	27	-86	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334838	97312924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_1567_18	chr10	-	2851	21	FSM	ENSMUSG00000034917.9	ENSMUST00000219479.2	2901	21	72	-22	72	1	multi-exon	FALSE	canonical	3	20	junction_20	30.1312130522487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATACAAGACTGAGGA	7055	False	NA	9	True	AATAAA	-28	NA	81127343	81109039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81127297
Isoform_15670_72	chr13	-	1873	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	27	5	27	-5	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGGGCTGCCCTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	97334838	97312843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_15671_67	chr13	-	1830	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	-10	85	-10	-85	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTATCCCTGAATCA	NA	False	NA	-19	True	AATAAA	-20	NA	97334875	97312923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
Isoform_15678_50	chr13	-	4086	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	60	-26	32	26	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTAGTTTCTCAGT	NA	False	NA	-27	True	ATTAAA	-24	NA	98399489	98383326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_15679_6	chr13	-	4156	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	-10	-26	-10	26	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTAGTTTCTCAGT	NA	False	NA	-27	True	ATTAAA	-24	NA	98399559	98383326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_1568_9	chr10	-	1259	7	FSM	ENSMUSG00000020232.18	ENSMUST00000132313.2	2501	7	1246	-4	-38	1	multi-exon	FALSE	canonical	3	543	junction_2	31.1202863454407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81184957	81181880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719
Isoform_15680_54	chr13	-	2805	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	58	1257	30	-1257	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGGATGTCCTTGGG	NA	False	NA	-35	True	AATAAA	-20	NA	98399491	98384609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_15682_72	chr13	-	2703	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	34	1383	6	-1383	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399515	98384735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_15683_191	chr13	-	2677	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	60	1383	32	-1383	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399489	98384735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_15684_10	chr13	-	2822	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	36	1262	8	-1262	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCGAGCCGAGGATGTCC	NA	False	NA	-40	True	AATAAA	-15	NA	98399513	98384614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
Isoform_15696_173	chr13	-	893	6	FSM	ENSMUSG00000021660.15	ENSMUST00000022163.15	1091	6	197	1	197	0	multi-exon	FALSE	canonical	3	579	junction_5	2432.68485422999	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453278	98446404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
Isoform_15698_3366	chr13	-	863	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	25	0	-14	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	3366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453489	98446404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
Isoform_157_6	ERCC-00170	+	1006	1	FSM	ERCC-00170A	DQ516773	1007	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00170_+_0_1000
Isoform_15702_11	chr13	-	724	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1186	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	24.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTCCTCCATCTTTGA	NA	False	NA	-9	True	ATTAAA	-20	NA	98854204	98849584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_98850076_98852942_98853093_98854121
Isoform_15703_6	chr13	-	1597	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1145	-5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	22.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATCCTCCTCCATCTTT	NA	False	NA	-11	True	ATTAAA	-18	NA	98854163	98849586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_98850076_98852942_98853093_98853205
Isoform_15704_3	chr13	-	712	4	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1160	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	27.8846831711525	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCTCCATCTTTGAAC	NA	False	NA	-7	True	ATTAAA	-22	NA	98854178	98849582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_98850076_98852942_98853093_98853205_98853218_98854121
Isoform_15705_7	chr13	-	4849	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	3	213	junction_9	37.5658568383579	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGACTTTGTGCCTTTG	NA	False	NA	-6	True	AATAAA	-20	NA	98951686	98859912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_15707_7	chr13	-	4921	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	213	junction_9	37.5658568383579	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951760	98859914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
Isoform_1571_113	chr10	-	1605	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	20	-4	20	1	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186238	81181880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
Isoform_15710_5	chr13	-	3433	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	-2	5014	-2	3025	multi-exon	FALSE	canonical	3	24	junction_23	103.521017838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99027550	98980540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
Isoform_15711_87	chr13	-	3410	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3027	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCCTGTGACATGCCGA	NA	False	NA	-11	True	AATAAA	-23	NA	99027537	98980538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_15712_32	chr13	-	3539	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3156	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATGGTTGTACTTCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	99027537	98980409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_15714_8	chr13	-	4384	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	4001	combination_of_known_junctions	TRUE	canonical	3	224	junction_23	67.7519382879703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCTCTTCCTCCCAT	NA	False	NA	-6	True	AATAAA	-16	NA	99027537	98979564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_15715_11	chr13	-	3391	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3025	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	102.017993890807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99027537	98980540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
Isoform_15717_6	chr13	-	3520	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3154	combination_of_known_junctions	TRUE	canonical	3	32	junction_23	102.017993890807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATGGTTGTACTTC	NA	False	NA	-7	True	ATTAAA	-14	NA	99027537	98980411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
Isoform_15718_24	chr13	-	3433	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	1	5019	1	3020	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGAAGCACCCTGTGAC	NA	False	NA	-18	True	AATAAA	-16	NA	99062891	98980545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_15719_81	chr13	-	3398	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	41	5014	11	3025	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99062851	98980540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_15720_5	chr13	-	3704	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-270	5019	-270	3020	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGAAGCACCCTGTGAC	NA	False	NA	-18	True	AATAAA	-16	NA	99063162	98980545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_15721_6	chr13	-	4370	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	42	4041	12	3998	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCCTTTGCTCTTCCTCC	NA	False	NA	-9	True	AATAAA	-13	NA	99062850	98979567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_15722_19	chr13	-	3529	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	41	4883	11	3156	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATGGTTGTACTTCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	99062851	98980409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
Isoform_15730_4	chr13	-	2788	14	ISM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	-31	8164	11	-8164	5prime_fragment	FALSE	canonical	3	224	junction_13	86.2978878292336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	99027537	98993894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
Isoform_15731_134	chr13	-	1686	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	16	2	16	-2	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTTGTGTTTCTTT	NA	False	NA	-13	True	AATAAA	-14	NA	99481197	99456156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
Isoform_15732_3	chr13	-	4711	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	83244	4129	10648	-4129	3prime_fragment	FALSE	canonical	3	84	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACCCCCGTTCATCTCT	NA	False	NA	0	True	AATAGA	-21	NA	99569804	99562082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_99562470_99563726_99563966_99565719
Isoform_15733_7	chr13	-	1972	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-5	12852	-5	3	5prime_fragment	FALSE	canonical	3	33	junction_3	7.32717544487642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAATAAAGACAAA	NA	False	NA	-17	True	NA	NA	NA	99653053	99570805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
Isoform_15734_3	chr13	-	1397	2	FSM	ENSMUSG00000052727.7	ENSMUST00000223820.2	1364	2	-29	-4	-7	4	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99653055	99643564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_99644718_99652811
Isoform_15738_558	chr13	-	2121	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	3	-1	3	1	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	672	False	NA	-5	True	AATAAA	-16	NA	100152144	100085039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
Isoform_1574_35	chr10	-	1528	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	16	-4	14	1	multi-exon	FALSE	canonical	3	76	junction_9	161.527966465926	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186244	81181880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
Isoform_15741_4	chr13	-	2690	17	NIC	ENSMUSG00000049658.14	novel	7567	38	NA	NA	-7	-18	combination_of_known_junctions	FALSE	canonical	3	4	junction_13	6.93243058025106	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAGAAGAAGAATATC	6752	False	NA	NA	False	AATACA	-4	NA	100240585	100197929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993_100235104_100235460_100235738_100240134
Isoform_15749_5	chr13	-	1978	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-2	434	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	100629089	100596291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_15750_5	chr13	-	1470	16	ISM	ENSMUSG00000021639.18	ENSMUST00000145266.8	1630	18	-45	8584	-9	6	5prime_fragment	FALSE	canonical	3	30	junction_15	76.4776219992925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGCACTTTGAAAGAAG	NA	False	NA	-13	True	AATAAA	-38	NA	100628891	100605309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
Isoform_15752_25	chr13	-	1562	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-18	112	0	-112	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTATTTTGAGCCATT	NA	False	NA	-8	True	ATTAAA	-18	NA	100629087	100605199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
Isoform_15753_10	chr13	-	1558	16	NNC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	0	114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	83.4267742794043	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100629087	100605201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626671_100628964
Isoform_15756_24	chr13	-	2761	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	30	1261	-8	-1	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100688976	100634275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
Isoform_15758_16	chr13	-	2724	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100688968	100634275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
Isoform_15759_4	chr13	-	3983	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100688966	100633014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
Isoform_1576_89	chr10	-	1436	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	28	-1	-8	1	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186286	81181880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
Isoform_15760_4	chr13	-	2856	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	-22	5	-22	-1	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100689248	100634275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
Isoform_15761_3	chr13	-	3338	7	FSM	ENSMUSG00000021636.16	ENSMUST00000225754.2	3111	7	-227	0	1	0	multi-exon	FALSE	canonical	1	3	junction_4	3.97562014729219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	-3	True	ATTAAA	-16	NA	100753437	100732466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753112
Isoform_15762_9	chr13	-	3052	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	9	0	9	0	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGCTCCTTATT	NA	False	NA	-1	True	ATTAAA	-18	NA	100753470	100732464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
Isoform_15763_13	chr13	-	2823	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	16	0	12	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787543	100753671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
Isoform_15764_64	chr13	-	2695	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	12	-315	12	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787543	100753671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
Isoform_15765_4	chr13	-	2604	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-12	-200	-8	7	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCATCTAGCTTTTCG	NA	False	NA	-7	True	AATAAA	-18	NA	100787567	100753786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
Isoform_15766_3	chr13	-	2902	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	50.35979919539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTCTTCTTATCC	NA	False	NA	-9	True	ATTAAA	-12	NA	100787543	100753674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787247
Isoform_15770_6	chr13	-	1227	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	357	660	318	19	3prime_fragment	FALSE	canonical	3	644	junction_3	46.9835077447395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAGGATAACTGCAGTC	NA	False	NA	-10	True	AATAAA	-22	NA	100867090	100839798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
Isoform_15772_15	chr13	-	1840	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	29	119	-10	-119	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATACTATTGCTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	100867418	100839257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_15775_230	chr13	-	1232	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	73	683	34	-4	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGTGATTTATGATT	NA	False	NA	-33	True	ATTAAA	-15	NA	100867374	100839821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_15776_78	chr13	-	1294	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	10	684	0	-5	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGTGATTTATGAT	NA	False	NA	-34	True	ATTAAA	-14	NA	100867437	100839822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
Isoform_1578_8	chr10	-	1660	9	NIC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	11	junction_4	185.412883856543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186243	81181884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
Isoform_15781_8	chr13	-	654	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	34	-117	34	-5	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTCCCTTTTCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	100881131	100872467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
Isoform_15783_8	chr13	-	451	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	69	51	0	1	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCAGGTGGTCACTTG	NA	False	NA	NA	False	AATAAA	-27	NA	100881096	100872635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
Isoform_15784_4	chr13	-	617	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	4	-50	4	50	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTAACTTGCTCTTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	100881161	100872534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
Isoform_15786_69	chr13	-	470	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	59	172	-12	2	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGGTGGTCACTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	100881108	100872634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
Isoform_1579_6	chr10	-	1465	10	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	11	junction_4	201.633208121291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186261	81181880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
Isoform_15792_38	chr13	-	661	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	36	4	34	-4	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100881131	100872466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
Isoform_15803_18	chr13	-	745	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	2	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGGTGGTCACTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	100881584	100872634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
Isoform_15806_76	chr13	-	1210	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	28	13	28	-13	multi-exon	FALSE	canonical	3	285	junction_6	26.2865816530031	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATACTTGCAG	NA	False	NA	-12	True	AATAAA	-28	NA	100912379	100896194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
Isoform_15808_6	chr13	-	1299	10	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	33	-12	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	138.91484201961	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912374	100896193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
Isoform_15809_12	chr13	-	1048	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	28	-11	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	115.35888985851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATACTTGCAGGA	NA	False	NA	-10	True	AATAAA	-30	NA	100912379	100896192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100896703_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
Isoform_15812_472	chr13	-	2330	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	74	85	-10	-3	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCATTTGCCCTTTTGA	NA	False	NA	-9	True	AATAAA	-25	NA	100923004	100915242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
Isoform_15823_70	chr13	-	3178	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	1	0	1	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969934	100939155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
Isoform_15824_74	chr13	-	2986	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-5	198	-5	1	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCTGTATATAAAACTA	NA	False	NA	1	True	AATAAA	-16	NA	100969940	100939353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
Isoform_15826_46	chr13	-	3208	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-29	0	-29	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969964	100939155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
Isoform_15834_4	chr13	-	3993	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-17	3137	-17	-36	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAGAGAAAAAGAAAA	NA	False	NA	NA	False	ACTAAA	-43	NA	101904742	101820207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
Isoform_15835_5	chr13	-	3863	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	69	2	67	-2	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTTCAGTTTCTATT	9986	False	NA	1	True	AATAAA	-19	NA	103911047	103878121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_15836_9	chr13	-	1615	10	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	69	7147	67	3709	5prime_fragment	FALSE	canonical	3	148	junction_1	32.4257937260668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGATGCGTCTGCTG	9986	False	NA	NA	False	AAGAAA	-28	NA	103911047	103885266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
Isoform_15841_158	chr13	-	2493	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	28	1641	0	-113	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTCATATGACTGTAA	NA	False	NA	-18	True	TATAAA	-34	NA	104246094	104161205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_15843_46	chr13	-	2567	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-29	1624	-29	-96	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGATTTTTTTACTGT	NA	False	NA	-1	True	CATAAA	-41	NA	104246151	104161188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_15846_10	chr13	-	4178	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-9	-7	-9	7	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACAGTACTTTTGTCTT	NA	False	NA	-6	True	AATAAA	-26	NA	104246131	104159557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_15849_5	chr13	-	4201	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-40	1	-40	-1	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGAGCTCACAGTACT	NA	False	NA	-14	True	AATAAA	-18	NA	104246162	104159565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
Isoform_15856_6	chr13	-	3496	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	7	-1	5	1	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGGATCTGAGTCAAC	NA	False	NA	NA	False	AATAAA	-19	NA	104314926	104278662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15857_44	chr13	-	1698	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	10	1794	-8	4	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314923	104280457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15859_10	chr13	-	2329	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	7	1166	5	-5	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACATCTGATTTTTTT	NA	False	NA	-7	True	AATAAA	-37	NA	104314926	104279829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15860_4	chr13	-	3508	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314954	104278660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15861_8	chr13	-	2295	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	-18	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGATTCCAACTTCAC	NA	False	NA	-20	True	AATAAA	-24	NA	104314923	104279842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15862_29	chr13	-	1680	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314923	104280457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15865_5	chr13	-	3498	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	8	-1164	-8	3	multi-exon	TRUE	canonical	3	258	junction_6	196.200152905139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314923	104278660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15866_13	chr13	-	2324	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	16	2	0	-2	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTGATTTTTTTCTT	NA	False	NA	-4	True	AATAAA	-40	NA	104314915	104279826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_1587_886	chr10	-	2404	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	0	653	0	223	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGGTCTCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	81214350	81202708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
Isoform_15870_27	chr13	-	1703	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	5	634	5	3	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCTTTATTTTCT	NA	False	NA	-22	True	AAAACA	-36	NA	104314926	104280458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15872_4	chr13	-	2350	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	-31	23	5	-23	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTAAATGATTCCAAC	NA	False	NA	-25	True	AATAAA	-19	NA	104314962	104279847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15874_13	chr13	-	2298	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	51	1189	5	-21	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAAATGATTCCAACTT	NA	False	NA	-23	True	AATAAA	-21	NA	104314926	104279845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15875_11	chr13	-	3495	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	39	4	-5	3	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314938	104278660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15876_49	chr13	-	1699	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	38	1801	-6	4	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTTTATTTTCTG	NA	False	NA	-21	True	AAAACA	-37	NA	104314939	104280457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
Isoform_15880_19	chr13	-	1606	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	0	3	0	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTCTGATTTTGTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	104314947	104310232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104311513_104314621
Isoform_15883_129	chr13	-	2337	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	6	-1	6	1	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTGTCAAATGACT	NA	False	NA	-12	True	TATAAA	-12	NA	104365324	104341630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
Isoform_15884_40	chr13	-	2361	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-21	2	0	-2	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATACGTGTCAAATG	NA	False	NA	-15	True	TATAAA	-9	NA	104365351	104341633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
Isoform_15888_3	chr13	-	2332	11	NIC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	98.9659032192401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTGTCAAATGACT	NA	False	NA	-12	True	TATAAA	-12	NA	104365330	104341630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361868_104361961_104365113
Isoform_15890_115	chr13	-	1873	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	12	186	12	-186	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTGCAGATTGCATTA	NA	False	NA	-6	True	AATAAA	-28	NA	104953449	104767833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
Isoform_15891_10	chr13	-	2055	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	12	4	12	-4	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATAGGCCTCCCGCTT	NA	False	NA	-3	True	AATAAA	-33	NA	104953449	104767651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
Isoform_15893_3	chr13	-	1767	15	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	-5	-187	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	187.819387841031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGCAGATTGCATT	NA	False	NA	-7	True	AATAAA	-27	NA	104953655	104767834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953308_104953618
Isoform_15894_4	chr13	-	767	3	FSM	ENSMUSG00000042655.6	ENSMUST00000043061.5	1310	3	0	543	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTGTTATGTT	NA	False	NA	NA	False	NA	NA	NA	105000401	104982333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_104982572_104994796_104994955_105000030
Isoform_15896_126	chr13	-	4295	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	30	0	17	0	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073436	106930946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
Isoform_15899_132	chr13	-	612	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.741345054583	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	-3	True	AATAAA	-13	NA	108295125	108189124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_108189199_108189230_108189489_108217886_108217928_108228067_108228158_108294976
Isoform_159_3004	ERCC-00171	+	487	1	FSM	ERCC-00171A	DQ854994	489	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3004	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00171_+_0_500
Isoform_15900_4	chr13	-	611	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	13	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.741345054583	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGATCCCTTCGTATTTC	NA	False	NA	-7	True	AATAAA	-9	NA	108295144	108189128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_108189199_108189246_108189489_108217886_108217928_108228067_108228158_108294976
Isoform_15902_4	chr13	-	724	6	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.258755362082	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGATCCCTTCGTATTTC	NA	False	NA	-7	True	AATAAA	-9	NA	108295159	108189128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_108189199_108189246_108189489_108202727_108202826_108217886_108217928_108228067_108228158_108294976
Isoform_15904_58	chr13	-	2973	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	241	480	158	-2	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGTCTTAAAATGT	NA	False	NA	-4	True	AATAAA	-21	NA	111626404	111562693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15906_84	chr13	-	2946	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	268	480	185	-2	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGTCTTAAAATGT	NA	False	NA	-4	True	AATAAA	-21	NA	111626377	111562693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15907_29	chr13	-	3425	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	268	1	185	-1	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	-5	True	AATAAA	-14	NA	111626377	111562214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15908_25	chr13	-	3452	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	241	1	158	-1	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	-5	True	AATAAA	-14	NA	111626404	111562214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15912_82	chr13	-	2886	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	185	228	185	-2	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGTCTTAAAATGT	NA	False	NA	-4	True	AATAAA	-21	NA	111626377	111562693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15913_26	chr13	-	3365	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	185	-251	185	-1	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTGTTCTTTGTAGT	NA	False	NA	-5	True	AATAAA	-14	NA	111626377	111562214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
Isoform_15925_17	chr13	-	2899	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	113	0	-61	0	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112788896	112734868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
Isoform_15926_3	chr13	-	2927	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-73	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_19	12.5835079052629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCCAACAGCATTTTT	NA	False	NA	0	True	AATAAA	-23	NA	112788908	112734867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777777_112781042_112781101_112787865_112787953_112788809
Isoform_15927_250	chr13	-	3319	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	16	354	-10	83	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7252	False	NA	-22	True	AATAAA	-21	NA	113063916	113004305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_15928_19	chr13	-	3560	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	-227	356	-227	81	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	7009	False	NA	-24	True	AATAAA	-19	NA	113064159	113004307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_15930_4	chr13	-	3236	26	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-2	81	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	134.718349158531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	7234	False	NA	-24	True	AATAAA	-19	NA	113063934	113004307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_15931_6	chr13	-	3100	25	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	17	5370	-9	-200	5prime_fragment	FALSE	canonical	3	524	junction_19	58.7018715393489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTGCTGCTCAAAGA	7253	False	NA	NA	False	NA	NA	NA	113063915	113009321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
Isoform_15933_5	chr13	-	1014	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	22	6	5	-6	multi-exon	FALSE	canonical	3	23	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATATAAAGTGCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	113182922	113179298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113179834_113181965_113182228_113182705
Isoform_15935_269	chr13	-	4436	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	6	5	6	1	multi-exon	FALSE	canonical	3	496	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCGCTTGTCTTTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	113755094	113728719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113731399_113753337
Isoform_15936_30	chr13	-	2320	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-21	2148	-21	425	multi-exon	FALSE	canonical	3	496	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGGGTATATTAGTGTA	NA	False	NA	NA	False	NA	NA	NA	113755121	113730862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113731399_113753337
Isoform_15942_11	chr13	-	3295	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-18	1170	-18	-1164	multi-exon	FALSE	canonical	3	496	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTACATGCAGGCT	NA	False	NA	NA	False	NA	NA	NA	113755118	113729884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_113731399_113753337
Isoform_15946_466	chr13	-	667	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	853	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
Isoform_15947_6	chr13	-	1518	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	172	8	-6	-8	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTAGTGTTGCTGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	114524622	114424338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
Isoform_15948_32	chr13	-	588	4	FSM	ENSMUSG00000021764.9	ENSMUST00000225035.2	571	4	-17	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	707.770364517256	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494
Isoform_15949_10	chr13	-	579	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-14	151	-1	2	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTGGCAGTTTCTATT	NA	False	NA	-16	True	AATAAA	-21	NA	114524600	114425181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
Isoform_15954_4	chr13	-	1370	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	128	353	128	-7	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGATAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114595357	114589858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
Isoform_15955_84	chr13	-	1611	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-13	2	-13	-2	multi-exon	FALSE	canonical	3	85	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTCTAGTTCGAGTT	NA	False	NA	-3	True	AATAAA	-20	NA	115226735	115224892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_115225498_115225729
Isoform_15959_758	chr13	-	1428	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	1890	1	-1890	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGATTTCTTATGTT	NA	False	NA	-14	True	ATTAAA	-16	NA	118523787	118516806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_15961_84	chr13	-	1477	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	2	1840	2	-1840	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTGACTGAAAGATTT	NA	False	NA	-12	True	ATTAAA	-17	NA	118523786	118516756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_15963_10	chr13	-	1632	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1687	0	-1687	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTAATAGCTTGCTAT	NA	False	NA	NA	False	AAAAAG	-43	NA	118523788	118516603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
Isoform_15969_3	chr13	-	1883	4	FSM	ENSMUSG00000025453.19	ENSMUST00000144599.2	1885	4	1	1	1	-1	multi-exon	FALSE	canonical	3	169	junction_3	27.3536509852382	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTCGTTGAGACTT	NA	False	NA	NA	False	AATAAA	-13	NA	119545532	119530008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_119531365_119533282_119533513_119541087_119541291_119545438
Isoform_15970_10	chr13	-	2273	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	0	1830	0	-1830	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAAGTCTCTTAGCCTA	NA	False	NA	NA	False	AATAAA	-23	NA	120217418	120173459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
Isoform_15971_5	chr13	-	2321	7	ISM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	445	12	414	-12	3prime_fragment	FALSE	canonical	3	107	junction_3	24.5453095768259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	120251823	120227339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
Isoform_15973_3	chr13	-	3091	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	-6	-524	0	-80	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATATTGCTATTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	120252274	120226803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
Isoform_15974_5	chr13	-	2370	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-21	617	-21	-12	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	120252363	120227339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
Isoform_15979_33	chr13	-	754	3	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTTGTGAACTGT	NA	False	NA	-1	True	NA	NA	NA	81792395	81784030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_81784533_81785816_81786000_81792326
Isoform_15980_3	chr13	-	2311	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9915	353	intron_retention	FALSE	canonical	3	25	junction_5	11.6961532137708	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	66846331	66830549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_15981_4	chr13	-	2489	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9922	353	intron_retention	FALSE	canonical	3	18	junction_2	15.0598804776134	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTCTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	66846338	66830549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_66832305_66833395_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66846221
Isoform_15982_14	chr13	-	547	5	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	515	5	NA	NA	-7	-19629	multi-exon	FALSE	canonical	3	33	junction_1	68.0661443009665	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCAGTGTCTATTGTT	NA	False	NA	NA	False	NA	NA	NA	66589186	66518841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr13_-_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
Isoform_15983_4	chr13	-	572	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	883	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	66.5807780068692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	0	True	NA	NA	NA	66950624	66939250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_-_66939417_66941473_66941596_66942701_66942763_66942962_66943090_66950528
Isoform_15984_3	chr13	-	3395	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	12	3850	multi-exon	FALSE	canonical	0	0	junction_11	151.533623191277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATGGCTAAACTATG	NA	False	NA	NA	False	AATAAA	-15	NA	107073441	106974746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr13_-_106975380_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
Isoform_15985_3	chr4	+	178	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9524	False	NA	NA	False	NA	NA	NA	147878387	147878565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_147878400_147878600
Isoform_15986_4	chr13	+	689	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.1993265821489	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCTGACTGACAAATTC	NA	False	NA	NA	False	NA	NA	NA	3528233	3542430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_3528391_3529908_3530002_3535030_3535221_3542181
Isoform_15987_3	chr13	+	639	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGCCCTTGTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	3528235	3542400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_3528391_3529908_3530002_3535048_3535221_3542181
Isoform_15992_2594	chr13	+	2181	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	2055	0	-4	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	2594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCTTGGTATTGAGT	NA	False	NA	31	True	AATAAA	-14	NA	3588129	3615816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
Isoform_15996_159	chr13	+	2253	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	-5	2055	-5	-4	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCTTGGTATTGAGT	NA	False	NA	31	True	AATAAA	-14	NA	3588057	3615816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
Isoform_15997_109	chr13	+	2571	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	1665	0	386	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTTTTGTAGTGCAGC	NA	False	NA	6	True	AATAAA	-15	NA	3588129	3616206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
Isoform_16016_20	chr13	+	2389	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	15	2049	15	1287	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCCCTGTGTCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	3684046	3701773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
Isoform_16018_3	chr13	+	1220	9	FSM	ENSMUSG00000021213.13	ENSMUST00000021634.4	1262	9	42	0	8	0	multi-exon	FALSE	canonical	1	2	junction_3	2.98956518577535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	7399	False	NA	NA	False	AATAAA	-17	NA	4241190	4255595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_4241310_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
Isoform_1602_17	chr10	-	3284	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	0	64	0	-6	multi-exon	TRUE	canonical	3	18	junction_9	5.66557723732532	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAGAAAAAAAAA	3912	False	NA	NA	False	NA	NA	NA	81263007	81235035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
Isoform_16020_6	chr13	+	2482	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	57	1686	-2	1433	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACACCTCTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	5911537	5918707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
Isoform_16030_225	chr13	+	3415	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	13	478	5	-5	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCTGAGTTTTACTCA	NA	False	NA	11	True	TATAAA	-12	NA	6598199	6630073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_16034_25	chr13	+	3443	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	-10	473	-8	0	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598176	6630078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_16035_14	chr13	+	3537	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	357	4	116	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATGCTAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6598198	6630194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_16039_10	chr13	+	1863	15	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-5432	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	118.890963594757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTGTATGCCTTGC	NA	False	NA	NA	False	AAAACA	-29	NA	6598198	6615260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026
Isoform_16040_14	chr13	+	2223	18	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-1534	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	107.960745140766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCCTCTGTAATAATT	NA	False	NA	NA	False	NA	NA	NA	6598199	6619158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934
Isoform_16042_367	chr13	+	3416	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTACTCATTA	NA	False	NA	14	True	TATAAA	-15	NA	6598198	6630076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
Isoform_16046_4	chr13	+	2559	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	476	-8	-16	8	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACTTGTAGTTTTAT	NA	False	NA	83	True	TATAAA	-14	NA	8936012	8942495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_16047_118	chr13	+	2488	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	463	76	21	-76	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8935999	8942411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_16048_9	chr13	+	2826	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	118	83	118	-83	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTCTGGCTTGTTAA	NA	False	NA	-8	True	AATAAA	-8	NA	8935654	8942404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
Isoform_1605_4	chr10	-	3218	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	185	-1748	185	-9	multi-exon	FALSE	canonical	3	13	junction_9	6.76775214792936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGGAAAGAAAAAA	265	False	NA	NA	False	NA	NA	NA	81266654	81235038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
Isoform_16053_39	chr13	+	4687	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	24	899	-2	-32	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143940	9223125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
Isoform_16056_4	chr13	+	4424	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-66	1362	4	-32	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143951	9223125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
Isoform_16057_7	chr13	+	922	5	ISM	ENSMUSG00000048264.17	ENSMUST00000169960.10	4801	36	-381	132891	4	-132891	5prime_fragment	FALSE	canonical	3	9	junction_3	19.0656759649376	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACAAAGAAAGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	9326567	9583323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_9327103_9543140_9543213_9544869_9545038_9556614_9556726_9583287
Isoform_16058_3	chr13	+	766	4	ISM	ENSMUSG00000048264.17	ENSMUST00000166299.2	4822	39	-462	132891	-8	-132891	5prime_fragment	FALSE	canonical	3	37	junction_2	9.41629792788369	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACAAAGAAAGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	9326555	9583323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_9327103_9543140_9543213_9556614_9556726_9583287
Isoform_16062_11	chr13	+	6773	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	9	-2	9	2	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTATTTGTCTTTATC	1723	False	NA	7	True	AGTAAA	-21	NA	12410260	12453776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
Isoform_16067_11	chr13	+	4243	16	FSM	ENSMUSG00000057069.8	ENSMUST00000071973.8	4239	16	-8	4	1	-4	multi-exon	TRUE	canonical	2	4	junction_15	21.5185707910374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCTTTTGTTTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	12580755	12624413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
Isoform_16068_4	chr13	+	4232	15	NIC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	25.3382223173624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	12580756	12624415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
Isoform_16069_3	chr13	+	2966	2	ISM	ENSMUSG00000110123.2	ENSMUST00000209949.2	915	10	24514	-2635	24514	2635	3prime_fragment	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	13522462	13527647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_13522733_13524951
Isoform_16070_78	chr13	+	6024	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	53	14	53	-14	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAATCTTATTTTGA	NA	False	NA	-2	True	ATTAAA	-13	NA	13612188	13686840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
Isoform_16076_67	chr13	+	3724	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	166	2	10	-2	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129219	14173657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_16077_12	chr13	+	3811	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	76	5	-76	-5	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTAGCCTTTTCCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	14129129	14173654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_1608_101	chr10	-	2874	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	-35	2	-19	-2	multi-exon	TRUE	canonical	3	153	junction_4	76.7224306246012	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332195	81322292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_16082_8	chr13	+	2392	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129197	14173657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
Isoform_16083_6	chr13	+	3682	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	8	-5	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTAGCCTTTTCCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	14129217	14173654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_16085_3	chr13	+	3804	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	45	-2	intron_retention	TRUE	canonical	3	22	junction_7	55.6602741252905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCCTTTTCCTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	14129098	14173657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
Isoform_16086_4	chr13	+	2288	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	71.8661467977486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTAGCCTTTTCCTATT	NA	False	NA	NA	False	AATAAA	-18	NA	14129258	14173655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
Isoform_16089_7	chr13	+	1675	15	FSM	ENSMUSG00000039219.19	ENSMUST00000110533.2	3020	15	-22	1367	-7	-1367	multi-exon	FALSE	canonical	3	52	junction_14	10.1962878399095	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTGAAAGAAAAGAAAATA	1421	False	NA	NA	False	NA	NA	NA	14238361	14338900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693
Isoform_1609_5	chr10	-	2969	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	-132	4	-66	-4	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGCCTCCAGGTGTCC	NA	False	NA	-34	True	AATAAA	-14	NA	81332292	81322294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_16092_1314	chr13	+	838	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	19	2054	19	-2054	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATTTTAGTTTTTAA	NA	False	NA	7	True	AATAAA	-7	NA	14787843	14800167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
Isoform_16093_108	chr13	+	929	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	19	1963	19	-1963	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTCATATATTTTC	NA	False	NA	5	True	ATTAAA	-13	NA	14787843	14800258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
Isoform_16098_4	chr13	+	2029	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	0	6	0	-6	multi-exon	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGAGGCCTGTTTTT	NA	False	NA	4	True	ATTAAA	-11	NA	14804738	14812782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14804870_14810884
Isoform_1610_160	chr10	-	2878	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	30	210	-20	-2	multi-exon	FALSE	canonical	3	251	junction_4	53.9264236863306	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332196	81322292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_16101_15	chr13	+	1939	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	88	8	-6	-8	multi-exon	FALSE	canonical	3	36	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTCTGAGGCCTGTTT	NA	False	NA	2	True	ATTAAA	-9	NA	14804826	14812780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14804870_14810884
Isoform_16102_32	chr13	+	1992	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	29	893	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804861	14812788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_14804950_14810884
Isoform_16104_30	chr13	+	2658	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	10	4	-10	-4	multi-exon	FALSE	canonical	3	374	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATTACTAAACAGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	17870007	17873686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_17870406_17871426
Isoform_16105_117	chr13	+	895	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	7	1770	7	79	multi-exon	FALSE	canonical	3	374	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGATTTTTGTGAATAT	NA	False	NA	18	True	AATAAA	-19	NA	17870004	17871920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_17870406_17871426
Isoform_16106_8	chr13	+	1139	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	-237	1770	-16	79	multi-exon	FALSE	canonical	3	374	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGATTTTTGTGAATAT	NA	False	NA	18	True	AATAAA	-19	NA	17869760	17871920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_17870406_17871426
Isoform_16109_10	chr13	+	2670	12	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	9	37434	9	1228	intron_retention	FALSE	canonical	3	433	junction_10	47.5288516118072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	18901468	19013547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773
Isoform_16110_9	chr13	+	1169	13	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	21	37434	21	1228	5prime_fragment	FALSE	canonical	3	433	junction_10	46.1629812006692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	18901480	19013547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392
Isoform_16114_392	chr13	+	3182	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	10	7	10	-7	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
Isoform_16116_5	chr13	+	4649	29	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-7	intron_retention	FALSE	non_canonical	3	298	junction_28	72.7622982101055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289_19050795_19050816
Isoform_1612_3	chr10	-	3765	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	251	junction_4	56.1023370477757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332229	81322292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_16121_37	chr13	+	3213	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	149	5	3	4	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGGGTTCTTTTTCAA	NA	False	NA	14	True	AATAAA	-19	NA	19132523	19335086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_16122_19	chr13	+	3226	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	3	-5	3	-4	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTCTTTTTCAAG	NA	False	NA	15	True	AATAAA	-20	NA	19132523	19335087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
Isoform_16123_4	chr13	+	587	4	ISM	ENSMUSG00000041112.18	ENSMUST00000181429.8	3113	7	-150	54800	-150	-4	5prime_fragment	FALSE	canonical	3	27	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAGGCCATAACCCAG	NA	False	NA	NA	False	NA	NA	NA	20274615	20393377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308
Isoform_16124_3	chr13	+	3669	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-36	1831	-13	-1831	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGGGGAGCTGGTGTT	NA	False	NA	2	True	AATAAA	-12	NA	20274752	20790692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
Isoform_16125_6	chr13	+	2187	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	351	-1825	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	8	True	AATAAA	-18	NA	20657246	20790698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
Isoform_1613_5	chr10	-	2947	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332196	81322292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
Isoform_16131_3029	chr13	+	2085	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	262	1857	-31	3	multi-exon	FALSE	canonical	3	719	junction_6	36.2209771220141	3029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTTTTGTTATGAC	1191	False	NA	24	True	AATAAA	-26	NA	21364362	21377036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
Isoform_16132_299	chr13	+	2346	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	1	1857	1	3	multi-exon	TRUE	canonical	3	719	junction_6	36.2209771220141	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTTTTGTTATGAC	930	False	NA	24	True	AATAAA	-26	NA	21364101	21377036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
Isoform_1614_4	chr10	-	3049	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	-9	2032	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGATATTAAGCACCT	6411	False	NA	NA	False	AATAAA	-15	NA	81344016	81336107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_81336729_81336766_81338940_81343761
Isoform_16140_52	chr13	+	2075	8	FSM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	-31	2	-31	-2	multi-exon	FALSE	canonical	3	28	junction_5	261.483054432026	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACGTTTTGTTTTTGTT	1191	False	NA	19	True	AATAAA	-21	NA	21364362	21377031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374266_21374295_21375389_21375417_21376199
Isoform_16143_26	chr13	+	1951	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	-9	2463	-9	2	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATACTGTCCTTTG	NA	False	NA	10	True	CATAAA	-15	NA	21546980	21553996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
Isoform_16144_10	chr13	+	2230	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATACTGTCCTTTGTGTG	NA	False	NA	14	True	CATAAA	-19	NA	21547008	21554000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
Isoform_16146_11	chr13	+	2713	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-11	1	-11	-1	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTAAGTTTCTTCT	NA	False	NA	11	True	ATTAAA	-15	NA	22129252	22144654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_16147_12	chr13	+	2747	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	156	295	131	-1	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTAAGTTTCTTCT	NA	False	NA	11	True	ATTAAA	-15	NA	22129437	22144654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
Isoform_16148_27	chr13	+	721	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	3	432	3	-432	multi-exon	FALSE	canonical	3	53	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAAAAAAATGCGTCAT	186	False	NA	NA	False	NA	NA	NA	23868184	23876459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23868605_23876158
Isoform_1615_62	chr10	-	1031	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	15	0	-8	multi-exon	FALSE	canonical	3	76	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	6420	False	NA	NA	False	AATAAA	-10	NA	81344007	81338154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81338940_81343761
Isoform_16150_53	chr13	+	4152	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-515	2212	-515	1325	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCTACTCAGATGGATG	NA	False	NA	113	True	AATAAA	-15	NA	24985124	24997968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
Isoform_16158_401	chr13	+	1951	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	0	6	0	-5	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTACGACTTTTTTC	NA	False	NA	15	True	AATAAA	-15	NA	25015661	25026130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
Isoform_16164_10	chr13	+	1869	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACGACTTTTTTCTTCA	NA	False	NA	19	True	AATAAA	-19	NA	25015661	25026134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
Isoform_16165_4	chr13	+	2168	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-270	4736	-21	435	multi-exon	TRUE	canonical	3	14	junction_2	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGTTTCAGAGATAATT	NA	False	NA	NA	False	AATAAA	-22	NA	25239965	25389953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
Isoform_16166_6	chr13	+	2857	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	22	26	22	-26	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATGATTCCTCATAA	NA	False	NA	NA	False	AATAAA	-17	NA	30320493	30430674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
Isoform_16168_4	chr13	+	3186	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-180	9	-78	-9	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCTGACATCATGTGCA	NA	False	NA	0	True	AATAAA	-13	NA	30843903	30895205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
Isoform_16169_4	chr13	+	3014	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-9	10	-9	-10	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCTGACATCATGTGC	NA	False	NA	-1	True	AATAAA	-12	NA	30844074	30895204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
Isoform_1617_53	chr10	-	1075	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	-44	15	-44	-8	multi-exon	FALSE	canonical	3	76	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	6376	False	NA	NA	False	AATAAA	-10	NA	81344051	81338154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81338940_81343761
Isoform_16173_4	chr13	+	1065	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	93	3	-9	-3	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCATGTGCAGTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	30844074	30895211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
Isoform_16174_4	chr13	+	1224	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	-63	0	-63	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30843918	30895214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
Isoform_16175_559	chr13	+	2636	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	-8	5	-8	-3	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTCTTCAGTTCTTCA	NA	False	NA	9	True	AATAAA	-10	NA	32986012	33006587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
Isoform_16178_18	chr13	+	1834	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	123	1296	-12	-1296	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATGGTCTTATTTTC	NA	False	NA	12	True	AATAAA	-25	NA	33211521	33224571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
Isoform_16179_10	chr13	+	1094	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-37	6	27	1	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCAGCTTGTTGCACTG	NA	False	NA	7	True	AATACA	-19	NA	34148696	34169623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_1618_4	chr10	-	1844	7	FSM	ENSMUSG00000034792.9	ENSMUST00000043709.8	1962	7	110	8	110	-8	multi-exon	FALSE	canonical	0	0	junction_4	27.6083723211315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAATCAGGGAAC	5889	False	NA	NA	False	AATAAA	-10	NA	81359949	81338154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81338940_81343761_81343916_81345119_81345250_81347830_81347960_81348244_81348400_81350070_81350256_81359643
Isoform_16180_3	chr13	+	3205	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	7	630	7	-630	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTTTTCTCTTAGAT	NA	False	NA	6	True	NA	NA	NA	34148676	34171796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_16181_11	chr13	+	1004	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	35	2803	-29	1	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCAGCTTGTTGCACTG	NA	False	NA	7	True	AATACA	-19	NA	34148704	34169623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_16182_3	chr13	+	3849	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	-5	-2	-5	2	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTCTCATTTATATCTC	NA	False	NA	16	True	ATTAAA	-20	NA	34148664	34172428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
Isoform_16183_18	chr13	+	4696	12	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	7	139	multi-exon	FALSE	canonical	3	30	junction_11	5.53277238352834	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGCATCTCCTGTGC	NA	False	NA	NA	False	AATAAA	-21	NA	34186389	34219158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478_34217402_34217425
Isoform_16186_7	chr13	+	3809	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	8	-551	8	551	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCCTTACTTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	34186353	34218211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
Isoform_16187_76	chr13	+	1196	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	51	6	-9	-3	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221630	34258051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_16188_6	chr13	+	1027	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	72.3972375163583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221632	34258051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_34221753_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_16189_3	chr13	+	1321	7	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	73.9316501160963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221614	34258051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_34221862_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_1619_198	chr10	-	3379	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	28	7	28	-7	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCTCCTTTGTGAT	4251	False	NA	-7	True	AATAAA	-12	NA	81380996	81364564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
Isoform_16190_4	chr13	+	1153	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	96.2808392152873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTAGTGTTCCTGT	NA	False	NA	9	True	AATAAA	-11	NA	34221615	34258051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_34221862_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
Isoform_16191_261	chr13	+	503	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	51	1	51	-1	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346997	34362155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34347233_34350043_34350120_34361963
Isoform_16193_33	chr13	+	427	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	51	-4	51	-1	multi-exon	FALSE	canonical	3	173	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346997	34362155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34347233_34361963
Isoform_16194_13	chr13	+	462	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	16	-4	16	-1	multi-exon	FALSE	canonical	3	173	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346962	34362155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_34347233_34361963
Isoform_16204_5	chr13	+	4474	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	179	3191	-23	198	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATTTGTAGCCATTTTT	NA	False	NA	8	True	AATAAA	-15	NA	35059463	35086856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
Isoform_16205_20	chr13	+	3478	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	102	-5	102	0	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35925397	36058046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16208_5	chr13	+	3617	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	-38	-4	-38	-1	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35925257	36058045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16209_5	chr13	+	2147	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	24	190	24	-190	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCTCTGTGTTTCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	36151859	36154181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_36151966_36152140
Isoform_1621_14	chr10	-	3420	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	-15	9	-15	-9	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGGCTCCTTTGTG	4208	False	NA	-9	True	AATAAA	-10	NA	81381039	81364566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
Isoform_16210_6	chr13	+	1691	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301616	36721567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_16211_67	chr13	+	1653	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	472	0	4	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301866	36721567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_16213_4	chr13	+	1017	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	25	-80	3	-1	multi-exon	FALSE	canonical	0	0	junction_1	98.7886633172046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGACATAGCATTTGT	NA	False	NA	5	True	AATAAA	-16	NA	36301865	36721563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_16214_3	chr13	+	4497	10	NIC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-141	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_1	19.6920739836559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38009809	38116669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
Isoform_16215_3	chr13	+	4562	10	FSM	ENSMUSG00000039087.18	ENSMUST00000110238.10	7437	10	19	2856	19	-2	multi-exon	FALSE	canonical	3	20	junction_1	27.5053305720281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGACAGTGGTCATAGG	NA	False	NA	11	True	AATAAA	-11	NA	38010032	38116665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
Isoform_16218_100	chr13	+	2477	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	259	2	9	-2	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGTTTGCATTCTTGC	4747	False	NA	16	True	AATAAA	-17	NA	38221229	38245407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
Isoform_16225_5	chr13	+	2770	17	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	-3	12866	-3	3477	5prime_fragment	FALSE	canonical	3	11	junction_1	3.63145976158349	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACGTAAACAGTCGGAAC	6493	False	NA	NA	False	GATAAA	-28	NA	38335266	38369687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548
Isoform_16226_4	chr13	+	3196	20	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	-38	10094	-38	6249	5prime_fragment	FALSE	canonical	3	11	junction_1	4.38266542559285	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAGAAGAAGTGCATAAA	6458	False	NA	NA	False	NA	NA	NA	38335231	38372459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425
Isoform_16227_18	chr13	+	1413	5	ISM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	13	-159	0	159	intron_retention	FALSE	canonical	3	102	junction_4	60.6356949329353	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38388926	38399565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580
Isoform_16228_7	chr13	+	1021	6	FSM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	6	-156	-1	156	multi-exon	FALSE	canonical	3	20	junction_5	91.8267934755429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38388919	38399562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399039
Isoform_16230_17	chr13	+	1172	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	0	613	0	72	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATTGTACACTACAC	NA	False	NA	8	True	AATAAA	-16	NA	38388920	38411028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_16233_3	chr13	+	1779	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	-2	8	-2	-6	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAAGTTGTTTGAAGT	NA	False	NA	17	True	ATTAAA	-18	NA	38388918	38411633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
Isoform_16234_3	chr13	+	3583	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	6	4	6	-4	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATAAACCAAATTGTAC	NA	False	NA	NA	False	AAAAAG	-11	NA	38529088	38684274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
Isoform_16235_4	chr13	+	3470	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	-5	128	-5	-128	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACTTACAGCCTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	38529077	38684150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
Isoform_16238_15	chr13	+	4316	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	-389	2	-389	2	multi-exon	FALSE	canonical	3	51	junction_1	65	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAATAGTGGATATTTA	NA	False	NA	17	True	AATAAA	-22	NA	41040279	41114365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41041762_41107051_41107148_41111627
Isoform_16239_4	chr13	+	4366	3	NNC	ENSMUSG00000021360.17	novel	3929	3	NA	NA	-440	2	intron_retention	FALSE	non_canonical	0	0	junction_1	90.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAATAGTGGATATTTA	NA	False	NA	17	True	AATAAA	-22	NA	41040228	41114365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_41041761_41107051_41107148_41111627
Isoform_16241_101	chr13	+	3989	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	49	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	29	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41071125	41114368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41072278_41107051_41107148_41111627
Isoform_16248_274	chr13	+	1448	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	267	7	24	1	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATACAGAGCTTAATTA	NA	False	NA	NA	False	AGTAAA	-21	NA	41154765	41166484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_16249_5	chr13	+	1747	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-6	-19	-6	19	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCGGTGCTTGGGATGA	NA	False	NA	NA	False	AATACA	-18	NA	41154492	41166510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_16251_82	chr13	+	1716	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-1	7	-1	1	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATACAGAGCTTAATTA	NA	False	NA	NA	False	AGTAAA	-21	NA	41154497	41166484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_16254_23	chr13	+	1526	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	241	-45	-2	45	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGCCTCGCATGTGAG	NA	False	NA	NA	False	AATACA	-44	NA	41154739	41166536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
Isoform_16258_148	chr13	+	923	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	-13	4	-13	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169754	41176058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
Isoform_16259_282	chr13	+	900	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	10	4	10	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169777	41176058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
Isoform_16260_44	chr13	+	862	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169756	41176058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
Isoform_16261_15	chr13	+	4154	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	309	20	309	-20	multi-exon	FALSE	canonical	3	181	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAATGAAAACAAGTA	NA	False	NA	NA	False	TTTAAA	-13	NA	41403628	41430033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41403791_41426041
Isoform_16262_20	chr13	+	512	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	324	3647	324	-3647	multi-exon	FALSE	canonical	3	181	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAATGGGGCCATTGCA	NA	False	NA	0	True	AATAAA	-10	NA	41403643	41426406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41403791_41426041
Isoform_16263_3	chr13	+	587	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	254	3642	254	-3642	multi-exon	FALSE	canonical	3	181	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCCATTGCAGATTT	NA	False	NA	5	True	AATAAA	-15	NA	41403573	41426411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_41403791_41426041
Isoform_16264_5	chr13	+	2183	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	-46	2	-46	-2	multi-exon	FALSE	canonical	1	1	junction_4	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACTTGTGAATTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	42454905	42461464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
Isoform_16265_27	chr13	+	1398	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43518981	43548679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
Isoform_16266_4	chr13	+	1430	3	ISM	ENSMUSG00000054021.7	ENSMUST00000220458.2	435	4	-3	3737	-3	-3737	5prime_fragment	FALSE	canonical	3	180	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGTATGTGTGTATC	NA	False	NA	NA	False	ATTAAA	-26	NA	43519100	43526471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_43519217_43524194_43524345_43525307
Isoform_16267_84	chr13	+	1456	9	NIC	ENSMUSG00000054021.7	novel	1367	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	20.7710736361893	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	9	True	ATTAAA	-21	NA	43519118	43548678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
Isoform_16277_487	chr13	+	936	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-8	872	-8	-5	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTGGTCACATTTCT	NA	False	NA	26	True	TATAAA	-26	NA	43551857	43555465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
Isoform_16283_45	chr13	+	739	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	20	-5	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTGGTCACATTTCT	NA	False	NA	26	True	TATAAA	-26	NA	43552130	43555465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
Isoform_16286_11	chr13	+	5267	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	63	667	-34	-19	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44884809	45074452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_16287_4	chr13	+	5989	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	0	8	0	-5	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATTTTGTCTGTCTTGT	NA	False	NA	8	True	AATAAA	-10	NA	44884746	45075111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_16288_8	chr13	+	5917	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	73	7	-24	-4	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	44884819	45075112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
Isoform_16293_18	chr13	+	3060	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	-2	7	-2	-7	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAACTGGGCCTTTGTG	4393	False	NA	NA	False	AATAAA	-8	NA	45543215	45565491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
Isoform_16295_29	chr13	+	1564	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	16	0	16	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660935	45699858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
Isoform_16299_4	chr13	+	2862	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	210	641	-67	5	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATTCTCATTTTGGTT	NA	False	NA	NA	False	AGTAAA	-37	NA	46655533	46803116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
Isoform_1630_14	chr10	-	1774	11	NIC	ENSMUSG00000034758.13	novel	1855	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	15.7445228571716	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81433179	81426737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
Isoform_16300_25	chr13	+	3706	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-45	3	-45	-3	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGTCAACAGTGTTGT	NA	False	NA	4	True	AATAAA	-4	NA	46822952	46831529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
Isoform_16303_3	chr13	+	2178	13	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	39	16161	-32	-3165	5prime_fragment	FALSE	canonical	3	35	junction_2	9.55212309152031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCTGCGACTGTGG	1200	False	NA	NA	False	ATTAAA	-14	NA	47197013	47222594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939
Isoform_16304_11	chr13	+	4268	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	40	679	-31	4	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	1201	False	NA	5	True	AATAAA	-15	NA	47197014	47238076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
Isoform_16305_8	chr13	+	4216	22	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_1	11.7560232065377	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	1233	False	NA	5	True	AATAAA	-15	NA	47197046	47238076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_47197096_47197115_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
Isoform_16307_18	chr13	+	1543	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-112	2418	-112	-2418	multi-exon	FALSE	canonical	3	109	junction_1	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTATGTGTCTGTTTTT	NA	False	NA	3	True	ATTAAA	-12	NA	48414591	48417084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_48415415_48415760_48415824_48416427
Isoform_16308_3	chr13	+	2446	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-113	1516	-113	-1516	multi-exon	FALSE	canonical	3	109	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGACTTCTGATGTG	NA	False	NA	0	True	ATTAAA	-19	NA	48414590	48417986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_48415415_48415760_48415824_48416427
Isoform_16309_158	chr13	+	1194	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	6	-13	6	13	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACCCTATACTCTTG	NA	False	NA	26	True	AATAAA	-28	NA	49340966	49349733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
Isoform_1631_22	chr10	-	1987	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	26	2	1	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTTGTCCTTTACC	NA	False	NA	-17	True	NA	NA	NA	81436708	81426740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
Isoform_16310_12	chr13	+	2093	3	NIC	ENSMUSG00000037966.16	novel	1187	4	NA	NA	-16	1	intron_retention	FALSE	canonical	3	395	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTTCCATGTGCCAC	NA	False	NA	14	True	AATAAA	-16	NA	49340984	49349721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_49341114_49347211_49348534_49349079
Isoform_16313_3	chr13	+	6329	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	-29	9	-29	-9	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTGAAGCACATGCG	1399	False	NA	2	True	AATAAA	-9	NA	49495031	49540486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
Isoform_16317_9	chr13	+	4650	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-62	0	-51	0	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1377	False	NA	18	True	AATAAA	-25	NA	49495009	49540502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
Isoform_1632_4	chr10	-	1975	14	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	35	2	combination_of_known_junctions	TRUE	canonical	3	7	junction_13	20.5406221853992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTCCTTTACCCAGGT	NA	False	NA	-12	True	NA	NA	NA	81436872	81426735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436812
Isoform_16320_4	chr13	+	2898	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	14	1509	14	74	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATCGTTCGATTTTTT	NA	False	NA	85	True	NA	NA	NA	49574738	49616540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_16321_74	chr13	+	2828	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	7	1586	7	-3	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTATAGAGTTTGTTA	NA	False	NA	8	True	NA	NA	NA	49574731	49616463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_16324_4	chr13	+	2920	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-7	1508	-7	75	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATCGTTCGATTTTTTT	NA	False	NA	86	True	NA	NA	NA	49574717	49616541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
Isoform_16325_4	chr13	+	839	7	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	-7	-24835	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	51.3173676470473	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	49574717	49591542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49591351
Isoform_1633_4	chr10	-	2024	14	NNC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.9426363489173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436637	81426737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436526
Isoform_16330_4	chr13	+	854	6	ISM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	244	18730	-11	-1139	5prime_fragment	FALSE	canonical	3	136	junction_5	6.18384993349612	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATAAAATATCCTTTG	NA	False	NA	NA	False	NA	NA	NA	49806797	49813484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425
Isoform_16333_348	chr13	+	4381	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	44	1	14	-1	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGGAAGTAGTTATTCT	NA	False	NA	29	True	ATTAAA	-30	NA	49835619	49887742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_16337_19	chr13	+	4422	34	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	11	-7	combination_of_known_junctions	FALSE	canonical	1	120	junction_1	357.515439185776	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835677	49887736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_1634_3	chr10	-	2276	13	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	36	junction_9	15.8348683466442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTTGTCCTTTACC	NA	False	NA	-17	True	NA	NA	NA	81436708	81426740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
Isoform_16347_6	chr13	+	1788	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	22	-12	0	1	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCATGAACTTTGCTG	NA	False	NA	NA	False	ATTAAA	-33	NA	50571921	50587817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
Isoform_16348_4	chr13	+	1928	10	NIC	ENSMUSG00000037816.11	novel	2316	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	7.03957069398096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACACATTCCTGCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	50571921	50587806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_50572024_50573875_50574065_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
Isoform_1635_4	chr10	-	1992	8	NIC	ENSMUSG00000034748.17	novel	1667	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	27	junction_7	72.5548349983146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGTTACATTTATG	9709	False	NA	-13	True	AATAAA	-23	NA	81463154	81457622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
Isoform_16350_202	chr13	+	4441	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-6	-1	-6	1	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGCTGTGAACTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	51254909	51306583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_16352_37	chr13	+	1144	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-36	3326	-36	-3274	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGATTGCTTTCCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	51254879	51303256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_16353_28	chr13	+	3671	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	125	667	125	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562799	51576166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51562982_51572677
Isoform_16354_8	chr13	+	3722	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	74	667	74	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562748	51576166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51562982_51572677
Isoform_16355_701	chr13	+	594	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	93	5	93	-5	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACCATTGTTGAAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	51799360	51804691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_16357_177	chr13	+	623	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	64	5	64	-5	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACCATTGTTGAAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	51799331	51804691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_16358_14	chr13	+	688	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	93	-89	93	89	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGAAATATTAAGCT	NA	False	NA	NA	False	AATAAA	-38	NA	51799360	51804785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51799508_51803620_51803749_51804372
Isoform_16362_4	chr13	+	1328	2	ISM	ENSMUSG00000035139.15	ENSMUST00000127360.2	604	5	-67	3186	-11	-3186	5prime_fragment	FALSE	canonical	3	173	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCAGCAGTAT	5527	False	NA	NA	False	NA	NA	NA	51805765	51807879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_51805857_51806642
Isoform_16364_56	chr13	+	3307	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	21	0	21	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5515	False	NA	8	True	AATAAA	-20	NA	51805753	51838080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_16368_6	chr13	+	3205	17	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	37.006703362364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGGCTATTGTGAT	5504	False	NA	5	True	AATAAA	-17	NA	51805742	51838077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
Isoform_1637_16	chr10	-	1670	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	219	2	-12	-2	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGTTACATTTATG	9877	False	NA	-13	True	AATAAA	-23	NA	81463412	81457622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
Isoform_16370_49	chr13	+	1072	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	-1	0	1	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTTAATGCCTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	52000713	52002505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
Isoform_16371_9	chr13	+	3577	7	ISM	ENSMUSG00000113211.2	ENSMUST00000220691.2	3270	8	0	-1	0	1	intron_retention	FALSE	canonical	2	4	junction_2	2.74873708374511	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTGTGTATAATC	NA	False	NA	NA	False	NA	NA	NA	52250776	52278195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192
Isoform_16372_3	chr13	+	3423	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.69776545872708	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTGTGTATAATC	NA	False	NA	NA	False	NA	NA	NA	52250777	52278195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277083
Isoform_16373_3	chr13	+	3428	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.69776545872708	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGTGTGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	52250776	52278196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277080
Isoform_16374_3	chr13	+	3825	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	243	1295	-21	-1285	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCATGAAGTTATTTTG	NA	False	NA	18	True	NA	NA	NA	52737451	52801533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_16376_3	chr13	+	2797	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTCTGAGCCAATTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	52737097	52797650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
Isoform_16377_3	chr13	+	2398	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	21	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATCTCTGAGCCAAT	NA	False	NA	NA	False	ATTAAA	-28	NA	52737493	52797647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
Isoform_16378_5	chr13	+	4125	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-124	-1283	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGAAGTTATTTTGTT	NA	False	NA	20	True	NA	NA	NA	52737084	52801535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_1638_3	chr10	-	2034	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-7	8	0	-4	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGTTATTTATGT	NA	False	NA	NA	False	NA	NA	NA	82077114	82060691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
Isoform_16381_4	chr13	+	5352	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-72	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCTTGTGATGACCT	NA	False	NA	NA	False	AATAAA	-8	NA	52737136	52802814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_16382_5	chr13	+	4959	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGACCTTTACGGATG	NA	False	NA	NA	False	AATAAA	-17	NA	52737538	52802823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_16384_9	chr13	+	3716	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	22	-1282	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAAGTTATTTTGTTG	NA	False	NA	21	True	NA	NA	NA	52737494	52801536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
Isoform_16386_12	chr13	+	582	3	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	19111	0	-643	5prime_fragment	FALSE	canonical	3	779	junction_1	87.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATGAAA	NA	False	NA	NA	False	CATAAA	-12	NA	54225887	54243250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_54225952_54239467_54239643_54242907
Isoform_1639_14	chr10	-	393	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	0	2582	0	-2582	5prime_fragment	FALSE	canonical	3	139	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGAGGAGTTTTAAA	NA	False	NA	-25	True	NA	NA	NA	82077114	82063269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_82063426_82063632_82063760_82077004
Isoform_16390_29	chr13	+	2780	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	3	0	-3	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACTGTCTCTTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	54225887	54262358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
Isoform_16398_4	chr13	+	4804	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	14	1	-11	-1	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGACTCCAGGGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	54651605	54699102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
Isoform_16399_524	chr13	+	2651	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	32	-1637	0	1637	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAAGTGACTTTACTTG	2706	False	NA	10	True	AATAAA	-16	NA	54722859	54730578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
Isoform_164_13	SIRV10001	+	617	1	FSM	SIRV10001A	SIRV10001	9941	1	0	9324	0	-9324	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACTATTTTCCGGTT	NA	False	NA	NA	False	NA	NA	NA	0	617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10001_+_0_600
Isoform_16401_303	chr13	+	636	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	3	9	3	-9	multi-exon	FALSE	canonical	3	1416	junction_1	0	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGAACTATTTCTTAA	5981	False	NA	14	True	AATAAA	-18	NA	54738022	54738962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54738233_54738536
Isoform_16402_8	chr13	+	4353	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769631	54811867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16404_4	chr13	+	2034	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	118	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTGCCACTGTTCCTC	NA	False	NA	30	True	AATAAA	-23	NA	54769600	54809517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16405_4	chr13	+	3347	3	FSM	ENSMUSG00000025873.17	ENSMUST00000220453.2	3363	3	17	-1	-6	1	multi-exon	FALSE	canonical	3	420	junction_1	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAGGAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	54769630	54792423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54769717_54786062_54786132_54789231
Isoform_16406_12	chr13	+	4250	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-34	-2468	6	-9	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769602	54811867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16409_124	chr13	+	4279	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	34	9	-6	-9	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769630	54811867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_1641_4	chr10	-	413	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	-3	176	-3	-1	multi-exon	FALSE	canonical	3	449	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82458763	82455860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541
Isoform_16410_79	chr13	+	1960	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	4	2358	4	119	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCACTGTTCCTCT	NA	False	NA	31	True	AATAAA	-24	NA	54769600	54809518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16412_87	chr13	+	1842	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	4	2476	4	1	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATGAGGCTGACTTAG	NA	False	NA	2	True	NA	NA	NA	54769600	54809400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16415_11	chr13	+	4172	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	2	-9	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	175.481418945317	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATAAAACCAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	54769598	54811867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
Isoform_16418_96	chr13	+	1515	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	63	7	-23	1	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937252	54944582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_16419_20	chr13	+	1136	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937252	54944582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
Isoform_1642_42	chr10	-	689	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	21	6	15	-6	multi-exon	FALSE	canonical	3	302	junction_2	73.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459009	82455690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_16420_4	chr13	+	1397	7	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	15	junction_6	140.730731856581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937252	54944581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969
Isoform_16421_8	chr13	+	1511	8	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	-23	1	intron_retention	FALSE	canonical	3	33	junction_5	126.228493823943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937252	54944582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
Isoform_16422_4	chr13	+	1316	6	FSM	ENSMUSG00000025875.15	ENSMUST00000163796.8	712	6	-22	-582	-22	1	multi-exon	FALSE	canonical	2	9	junction_1	159.188441791482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54937253	54944582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_54937495_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_16423_3	chr13	+	1143	5	ISM	ENSMUSG00000025875.15	ENSMUST00000145574.2	718	7	253	9	253	-2	intron_retention	FALSE	canonical	3	389	junction_4	10.7092249953019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAACAGTGGTGGTTTA	NA	False	NA	8	True	AATAAA	-9	NA	54940936	54944579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
Isoform_16424_4	chr13	+	3843	15	FSM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	-17	1	-17	-1	multi-exon	TRUE	canonical	1	4	junction_1	2.26778683805536	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGAGTGTCGCTTCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	55097206	55153830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
Isoform_16425_23	chr13	+	3387	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-5	1	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCCGATGTGTGCGCTC	14	False	NA	12	True	NA	NA	NA	55253134	55282639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
Isoform_16426_8	chr13	+	3639	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-14	228	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAAAATAGTCTG	5180	False	NA	NA	False	AATAAA	-23	NA	55253109	55282866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
Isoform_16427_37	chr13	+	3331	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-5	7	-5	-7	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCATCCGATGT	14	False	NA	4	True	NA	NA	NA	55253134	55282631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
Isoform_16428_12	chr13	+	3576	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-15	-228	1	228	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAAAATAGTCTG	4	False	NA	NA	False	AATAAA	-23	NA	55253124	55282866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
Isoform_16429_4	chr13	+	2001	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-38	1370	-22	700	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTCTTCTGTGAG	5172	False	NA	NA	False	NA	NA	NA	55253101	55281268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
Isoform_1643_71	chr10	-	519	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	21	176	15	-1	multi-exon	FALSE	canonical	3	302	junction_2	73.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459009	82455860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_16430_10	chr13	+	3194	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-11	-2071	-5	1	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCCGATGTGTGCGCTC	14	False	NA	12	True	NA	NA	NA	55253134	55282639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
Isoform_16431_4	chr13	+	3062	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	237	25	237	-25	multi-exon	FALSE	canonical	2	5	junction_4	3.40364144505634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATCTCTGTGTGCCTG	NA	False	NA	NA	False	TATAAA	-13	NA	55300689	55316547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
Isoform_16432_5	chr13	+	3018	17	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	2791	25	-252	-25	3prime_fragment	FALSE	canonical	2	5	junction_3	3.50836055017155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATCTCTGTGTGCCTG	NA	False	NA	NA	False	TATAAA	-13	NA	55303243	55316547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
Isoform_16435_5	chr13	+	914	6	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	91.9469412215545	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55357594	55388661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
Isoform_16438_8	chr13	+	3261	7	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-4	-17157	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	52.6046575884683	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAGAAGGTACAG	NA	False	NA	NA	False	AATATA	-34	NA	55357590	55408246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156
Isoform_1644_18	chr10	-	555	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	-15	176	-15	-1	multi-exon	FALSE	canonical	3	302	junction_2	73.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459045	82455860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458798
Isoform_16440_3	chr13	+	3336	4	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	-3	77480	-3	-1	5prime_fragment	FALSE	canonical	3	116	junction_1	68.9025076144225	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTGTTGTCTTTTTTT	NA	False	NA	NA	False	AATACA	-13	NA	55357591	55388658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502
Isoform_16441_3	chr13	+	953	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	-9	26882	-9	655	5prime_fragment	FALSE	canonical	3	116	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAGACAGCCCTCCTC	NA	False	NA	NA	False	AATAAA	-26	NA	55359622	55361778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_55359814_55361016
Isoform_16443_6	chr13	+	2703	5	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	-24	1	-24	0	intron_retention	FALSE	canonical	3	116	junction_1	64.355943781441	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTGTCTTTTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	55359607	55388659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502
Isoform_16446_11	chr13	+	3348	7	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-3	-17157	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	52.6046575884683	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAGAAGGTACAG	NA	False	NA	NA	False	AATATA	-34	NA	55359628	55408246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156
Isoform_16447_1940	chr13	+	1111	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1533	0	14	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	1940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5567	False	NA	18	True	NA	NA	NA	55469845	55473085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
Isoform_16457_54	chr13	+	3454	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-134	-1151	-11	0	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-18	True	NA	28	True	AATACA	-30	NA	55593139	55608740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
Isoform_16458_230	chr13	+	3014	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	-20	0	-20	0	multi-exon	FALSE	non_canonical	0	0	junction_15	121.188264925097	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593130	55608740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
Isoform_1646_73	chr10	-	592	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	-169	-11	-6	multi-exon	FALSE	canonical	3	187	junction_2	131	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459041	82455690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458927
Isoform_16460_139	chr13	+	2989	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-120	-872	3	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-4	True	NA	28	True	AATACA	-30	NA	55593153	55608740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
Isoform_16463_5	chr13	+	2882	16	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_15	158.985729618171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	3	True	NA	28	True	AATACA	-30	NA	55593160	55608740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
Isoform_16464_5	chr13	+	900	2	FSM	ENSMUSG00000058569.9	ENSMUST00000225888.2	793	2	-14	-93	4	93	multi-exon	FALSE	canonical	3	616	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAAAAAAATACT	NA	False	NA	NA	False	NA	NA	NA	55740974	55742017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55741171_55741313
Isoform_16465_76	chr13	+	1396	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-7	31	4	-21	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	AATGAA	-29	NA	55740974	55745479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
Isoform_16466_169	chr13	+	2122	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	9	-1	9	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747886	55758256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
Isoform_1647_92	chr10	-	422	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	1	-11	-1	multi-exon	FALSE	canonical	3	187	junction_2	131	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459041	82455860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458927
Isoform_16471_5	chr13	+	2049	5	FSM	ENSMUSG00000021504.15	ENSMUST00000100764.10	2195	5	143	3	-26	-2	multi-exon	FALSE	canonical	2	2	junction_4	40.0686910192983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACACTGGCAAGGAACT	NA	False	NA	3	True	AATAAA	-16	NA	55747851	55758253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55757031
Isoform_16472_3	chr13	+	2222	6	NNC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.0329863987187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747899	55758256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756397_55756616_55757031
Isoform_16473_3	chr13	+	1896	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	41.0213359119373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACACTGGCAAGGAACT	NA	False	NA	3	True	AATAAA	-16	NA	55747883	55758253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55748006_55751832_55752196_55756154_55756239_55756510_55756616_55757031
Isoform_16474_7	chr13	+	2032	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGCAAGGAACTGGACT	NA	False	NA	8	True	AATAAA	-21	NA	55747878	55758258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
Isoform_16475_68	chr13	+	1385	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	0	-3	0	3	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGTCTGTACATTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	55770817	55780227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
Isoform_1648_13	chr10	-	533	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	21	-85	-11	-6	multi-exon	FALSE	canonical	3	100	junction_2	174.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTCTTACTATACAT	NA	False	NA	-6	True	NA	NA	NA	82459041	82455690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458986
Isoform_16483_5	chr13	+	3541	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-12	-2144	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGCCACTGACCTGTCC	NA	False	NA	5	True	AATAAA	-14	NA	55782827	55826925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_16484_5	chr13	+	3789	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-19	1906	-19	-1906	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGCATTTCTTTTT	NA	False	NA	12	True	ATTAAA	-17	NA	55782820	55827163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_16485_6	chr13	+	3693	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-12	1995	-12	-1995	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGCTCAGAGTTTTTA	NA	False	NA	12	True	NA	NA	NA	55782827	55827074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_16486_24	chr13	+	3553	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-12	2135	-12	-2135	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGTCCTTTCAGTGG	NA	False	NA	14	True	AATAAA	-23	NA	55782827	55826934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
Isoform_16489_21	chr13	+	4670	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	-24	6	-24	-6	multi-exon	FALSE	canonical	3	233	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGCTCTGTACTACTT	NA	False	NA	13	True	AATAAA	-13	NA	55840912	55851307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55841161_55846885
Isoform_1649_13	chr10	-	400	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	-16	85	-16	-1	multi-exon	FALSE	canonical	3	100	junction_2	174.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGGGGGCTCAATGG	NA	False	NA	-1	True	AGTAAA	-19	NA	82459078	82455860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82456052_82458541_82458659_82458986
Isoform_16494_116	chr13	+	1463	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	68	-4	68	4	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTCGCTTGTTTCT	NA	False	NA	22	True	AATAAA	-18	NA	55862530	55874044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
Isoform_16495_4	chr13	+	1552	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	-30	5	-30	-5	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTCAAAGTGGTTTCG	NA	False	NA	13	True	AATAAA	-9	NA	55862432	55874035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
Isoform_16496_14	chr13	+	670	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	-125	-1	-125	1	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTTATTTGTCATT	NA	False	NA	14	True	AATACA	-17	NA	55875055	55924642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
Isoform_16497_80	chr13	+	560	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	-15	-1	-15	1	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTTATTTGTCATT	NA	False	NA	14	True	AATACA	-17	NA	55875165	55924642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
Isoform_16498_4	chr13	+	357	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	0	-36255	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCACATTTGTAATTTG	NA	False	NA	25	True	ATTAAA	-31	NA	55875180	55888386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_55875288_55880748_55880881_55888268
Isoform_16499_4	chr13	+	604	5	NNC	ENSMUSG00000021496.13	novel	546	4	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	177.800977218912	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTTATTTGTCATT	NA	False	NA	14	True	AATACA	-17	NA	55875174	55924642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_55875288_55880748_55880881_55881569_55881623_55923179_55923261_55924417
Isoform_16500_4	chr13	+	1452	8	FSM	ENSMUSG00000021509.6	ENSMUST00000021971.6	3374	8	5	1917	5	-1917	multi-exon	FALSE	canonical	3	15	junction_7	3.84919816723071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	56586172	56620135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742
Isoform_16501_6	chr13	+	1853	8	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-36	-2335	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	4.23300925429402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAATGTGTTTTTGCGT	NA	False	NA	NA	False	AATAAA	-20	NA	56586131	56619717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
Isoform_16502_3	chr13	+	1344	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	47	7	20	-7	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGATACAACTAGTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	56850898	56881020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
Isoform_16503_10	chr13	+	2227	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	81	4276	25	-892	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCAAGTATTTCTCA	NA	False	NA	NA	False	AAAACA	-12	NA	56850903	56885914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
Isoform_16505_3	chr13	+	6511	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	75	-2	19	2	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTGTTTATTTTCTT	NA	False	NA	15	True	AATAAA	-19	NA	56850897	56890192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
Isoform_16506_3	chr13	+	1883	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	11	4	6	-4	multi-exon	FALSE	canonical	3	188	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAAAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	58305473	58309740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58305551_58307690_58307722_58307965
Isoform_16507_5	chr13	+	752	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	15	-3	10	3	multi-exon	FALSE	canonical	3	14	junction_4	87.5928079239386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305477	58311763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
Isoform_16508_37	chr13	+	708	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	10	744	10	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305477	58311763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
Isoform_16509_7	chr13	+	2619	4	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	176.305290775846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATATGTGAAAGAATGT	NA	False	NA	15	True	AATAAA	-28	NA	58550068	58557905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_58550332_58552384_58552470_58554815_58554905_58555723
Isoform_16510_75	chr13	+	2539	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-91	-1	-91	1	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550422	58557907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
Isoform_16511_4	chr13	+	3501	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	3	-1057	3	1	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTGGTCATGGTGTCT	NA	False	NA	10	True	NA	NA	NA	58550516	58558963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
Isoform_16513_5	chr13	+	2284	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-131	294	-131	-294	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTATTGGAGCACACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	58550382	58557612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
Isoform_16515_17	chr13	+	2447	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	353	1055	-84	1	multi-exon	FALSE	canonical	3	159	junction_1	108.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550429	58557907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58550604_58554815_58554905_58555723
Isoform_16517_3	chr13	+	3492	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	366	-3	-71	3	multi-exon	FALSE	canonical	3	159	junction_1	108.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGGTCATGGTGTCTCT	NA	False	NA	12	True	NA	NA	NA	58550442	58558965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_58550604_58554815_58554905_58555723
Isoform_16518_12	chr13	+	2517	23	NIC	ENSMUSG00000021555.16	novel	1207	14	NA	NA	3	28	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	172.373441416551	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1177	False	NA	49	True	AATAAA	-11	NA	59733075	59782594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_59733107_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_1652_47	chr10	-	2479	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-1	76	-1	-76	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTACATCGTAACT	NA	False	NA	-9	True	TATAAA	-15	NA	82599979	82584610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_16520_13	chr13	+	448	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	3	8982	3	45	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGCCTACCTGATTC	1312	False	NA	NA	False	AATAAA	-21	NA	59733210	59747649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
Isoform_16528_16	chr13	+	2150	17	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	102	9811	3	447	5prime_fragment	FALSE	canonical	3	649	junction_6	71.965025142426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTTTATTTGCAACT	1312	False	NA	NA	False	AATAAA	-13	NA	59733210	59773925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
Isoform_1653_31	chr10	-	2527	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	27	0	-16	0	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599951	82584534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_16532_458	chr13	+	2549	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	102	1142	3	28	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1312	False	NA	49	True	AATAAA	-11	NA	59733210	59782594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_16533_117	chr13	+	2630	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	21	1142	21	28	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1231	False	NA	49	True	AATAAA	-11	NA	59733129	59782594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_16534_12	chr13	+	2503	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3	27	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	172.648193620236	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1312	False	NA	48	True	AATAAA	-10	NA	59733210	59782593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773277_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_16535_18	chr13	+	2465	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3	28	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	170.857036683091	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1312	False	NA	49	True	AATAAA	-11	NA	59733210	59782594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
Isoform_16543_21	chr13	+	4915	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-4	580	-4	-580	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	9827	False	NA	NA	False	AAAACA	-31	NA	60749766	60910035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
Isoform_16544_5	chr13	+	5390	27	FSM	ENSMUSG00000021559.15	ENSMUST00000226059.2	5009	27	3	-384	3	-5	multi-exon	TRUE	canonical	3	16	junction_26	11.2282004438423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9824	False	NA	NA	False	AATAAA	-16	NA	60749763	60911000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
Isoform_16546_37	chr13	+	1292	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-118698	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.588018629167	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	1169	False	NA	7	True	NA	NA	NA	62126863	62260150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62126887_62245559_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_16547_7	chr13	+	2332	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-21	-1425	1	1355	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	62245562	62261216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_16548_6	chr13	+	3175	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-2262	-5	2192	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCTATATTATT	NA	False	NA	NA	False	AATATA	-13	NA	62245556	62262053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_1655_20	chr10	-	2560	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-1	-5	-1	5	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCGTGTGGGTTCACT	NA	False	NA	1	True	NA	NA	NA	82599979	82584529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_16551_15	chr13	+	1946	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-25	-1035	-3	965	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTTGGGTGCATAT	NA	False	NA	NA	False	ATTAAA	-32	NA	62245558	62260826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
Isoform_16552_4	chr13	+	1196	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	-5	-713	-5	289	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
Isoform_16554_4	chr13	+	1451	4	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-6	286	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	227.404680886056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCTTGGTAATGGT	NA	False	NA	4	True	NA	NA	NA	62245555	62260147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62245653_62254561_62254689_62254881_62254943_62258981
Isoform_16557_3	chr13	+	1566	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-5	289	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
Isoform_16558_57	chr13	+	425	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	31	-4	31	4	multi-exon	FALSE	canonical	3	513	junction_2	20.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGGTATCTGAATTTT	NA	False	NA	17	True	NA	NA	NA	62411410	62421105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_62411510_62420579_62420707_62420906
Isoform_16559_6	chr13	+	467	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	31	-757	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATCCAGAATCCCTATT	NA	False	NA	NA	False	NA	NA	NA	62411410	62422310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
Isoform_16560_27	chr13	+	1049	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	8	-2	5	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63387850	63450098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_16562_11	chr13	+	1663	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-10	-598	-10	3	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTTGCTTAGAGGT	NA	False	NA	35	True	AATAAA	-35	NA	63387832	63450694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_16563_3	chr13	+	1283	6	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	57.1398284911672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCAGTTTGCTTCTGAA	NA	False	NA	3	True	AATAAA	-17	NA	63420613	63450096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_63420920_63421039_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_16564_3	chr13	+	822	3	NIC	ENSMUSG00000021458.18	novel	688	4	NA	NA	-14	1	intron_retention	FALSE	canonical	2	2	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTAGTTAGTCTCACTG	NA	False	NA	NA	False	AATAAA	-12	NA	63420615	63442983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_63421164_63429955_63430073_63442826
Isoform_16565_4	chr13	+	1166	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	542	-245	9	4	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCTTCTGAATTTGAT	NA	False	NA	9	True	AATAAA	-23	NA	63420856	63450102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_16566_10	chr13	+	2052	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-456	-678	-14	3	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTCTGGCCTTGCTT	NA	False	NA	29	True	AATAAA	-29	NA	63420615	63450688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
Isoform_16567_17	chr13	+	1946	11	ISM	ENSMUSG00000021470.20	ENSMUST00000067821.13	2743	14	8	15845	8	0	5prime_fragment	TRUE	canonical	3	89	junction_9	12.0979337078693	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTTCTAAACTA	NA	False	NA	8	True	AATAAA	-24	NA	63963124	64001624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
Isoform_16571_7	chr13	+	5583	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-164	-805	8	6	multi-exon	FALSE	canonical	3	68	junction_14	17.5231768921923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCGAATTTAATATATAT	NA	False	NA	15	True	AATAAA	-26	NA	63963124	64048122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
Isoform_16572_5	chr13	+	1297	2	FSM	ENSMUSG00000021476.10	ENSMUST00000221264.2	471	2	-367	-459	10	459	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGGTTTTATTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	64309692	64311891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_64310149_64311050
Isoform_16573_86	chr13	+	2557	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	7	0	7	0	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64309689	64334351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
Isoform_16576_22	chr13	+	1838	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	228	2052	0	1	multi-exon	FALSE	canonical	3	37	junction_1	3.65892813567591	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580355	64587535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_16579_7	chr13	+	2042	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	21	2055	-20	-2	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGCTTGTGTTTTAT	NA	False	NA	13	True	AATAAA	-13	NA	64580148	64587532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_1658_60	chr10	-	1054	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	20	1480	20	293	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGTTTGTTGCTCTGTA	NA	False	NA	-6	True	ATTAAA	-17	NA	82599958	82586014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
Isoform_16580_4	chr13	+	1828	8	NIC	ENSMUSG00000021483.9	novel	4118	8	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_5	15.0563567157205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580383	64587535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584661_64585202_64585327_64585690_64585847_64586594
Isoform_16581_4	chr13	+	1777	7	ISM	ENSMUSG00000021483.9	ENSMUST00000222562.2	1107	8	-71	-497	-71	1	intron_retention	FALSE	canonical	3	38	junction_3	3.43592135468138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580722	64587535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
Isoform_16582_3	chr13	+	770	4	FSM	ENSMUSG00000110393.3	ENSMUST00000209951.2	1597	4	-238	1065	-238	-11	multi-exon	FALSE	canonical	3	28	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCATAAAAGAACACATA	NA	False	NA	NA	False	NA	NA	NA	65389328	65396870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789
Isoform_16583_4	chr13	+	419	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-16	1122	-16	-1122	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCTTTTCCTCTCAC	NA	False	NA	NA	False	NA	NA	NA	66261277	66269160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
Isoform_16584_5	chr13	+	433	4	FSM	ENSMUSG00000113760.2	ENSMUST00000221828.2	569	4	0	136	0	-136	multi-exon	FALSE	canonical	3	110	junction_1	62.055530687352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCCTCTCACAAT	NA	False	NA	NA	False	NA	NA	NA	66180022	66187925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_66180131_66186206_66186334_66186533_66186595_66187788
Isoform_16585_5	chr13	+	476	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-38	1320	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	53.2436746373585	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	66261255	66271970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66271801
Isoform_16586_22	chr13	+	593	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	375634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6305071980195	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCCTCTGAAGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	66261264	66646284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66261375_66309197_66309325_66309508_66309570_66645539_66645683_66646132
Isoform_16587_170	chr13	+	2465	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	568	391	-50	-116	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTGTTAGAATGATG	8426	False	NA	30	True	ATTAAA	-16	NA	67081461	67146074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_16588_42	chr13	+	2700	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	334	390	-52	-115	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTAGAATGATGT	8192	False	NA	31	True	ATTAAA	-17	NA	67081227	67146075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_16589_20	chr13	+	3044	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	-12	392	-12	-117	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTTTGTTAGAATGAT	7846	False	NA	29	True	ATTAAA	-15	NA	67080881	67146073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
Isoform_16592_3	chr13	+	2747	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	-34	-1	-34	1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTTTATTATTATTATT	NA	False	NA	15	True	AATAAA	-20	NA	67342535	67357363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
Isoform_16593_7	chr13	+	3245	4	FSM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	12	1	1	-1	multi-exon	FALSE	canonical	3	27	junction_3	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATTGATTTTGGTCAGT	NA	False	NA	4	True	NA	NA	NA	67927835	67937196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_67927939_67931908_67932036_67932512_67932609_67934277
Isoform_16594_5	chr13	+	2381	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTGTGTACTCTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	68730318	68740455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_16595_17	chr13	+	2355	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	15	51	0	8	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCGTCTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	68730381	68740406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_16596_5	chr13	+	2421	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730366	68740457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_16597_4	chr13	+	2710	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	59.418478233253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATGTTAATTGTCCGT	NA	False	NA	NA	False	AATAAA	-12	NA	68730360	68740395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
Isoform_16598_9	chr13	+	2654	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730381	68740457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
Isoform_166_10	SIRV10001	+	1056	1	FSM	SIRV10001A	SIRV10001	9941	1	0	8885	0	-8885	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAAGGGGGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	0	1056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10001_+_0_1100
Isoform_16602_631	chr13	+	2794	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	39	1	6	-1	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760173	69782452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
Isoform_16603_190	chr13	+	2824	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	11	-1	11	1	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760145	69782454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
Isoform_16608_10	chr13	+	2660	3	FSM	ENSMUSG00000021598.10	ENSMUST00000221893.2	815	3	-40	-1805	-17	0	multi-exon	FALSE	canonical	3	811	junction_1	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCATGTAATTCTTA	-1	True	NA	23	True	AATAAA	-19	NA	69957992	69964219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_69958172_69959725_69959810_69961822
Isoform_16609_313	chr13	+	865	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	48	0	-2	0	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	14	False	NA	27	True	AATAAA	-23	NA	69958007	69964223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
Isoform_16611_8	chr13	+	2688	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-63	0	-63	0	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCATCTTCTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	72776875	72782317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
Isoform_16612_16	chr13	+	2604	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	18	3	18	-3	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTTTCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	72776956	72782314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
Isoform_16614_243	chr13	+	895	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	28	0	-10	0	multi-exon	FALSE	canonical	3	623	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479134	73480297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73479211_73479478
Isoform_16616_11	chr13	+	897	2	FSM	ENSMUSG00000021607.10	ENSMUST00000222030.2	680	2	-10	-207	-10	0	multi-exon	FALSE	canonical	3	30	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479134	73480297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73479213_73479478
Isoform_1662_7	chr10	-	2387	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	3	-33	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	34	True	AATAAA	-10	NA	82599975	82584567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
Isoform_16620_722	chr13	+	3613	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	54	8	20	-8	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACAGGCTCGAGTG	NA	False	NA	15	True	AATAAA	-15	NA	73615369	73664533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
Isoform_16623_57	chr13	+	3644	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	23	8	-11	-8	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACAGGCTCGAGTG	NA	False	NA	15	True	AATAAA	-15	NA	73615338	73664533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
Isoform_16628_223	chr13	+	2296	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	43	1	43	-1	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTTAACCTCTAA	NA	False	NA	20	True	AATAAA	-15	NA	73752167	73768723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_16629_134	chr13	+	2383	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	-44	1	-44	-1	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTTAACCTCTAA	NA	False	NA	20	True	AATAAA	-15	NA	73752080	73768723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_16631_7	chr13	+	2309	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	83	-52	83	52	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTAAACCTTTCTCAAG	NA	False	NA	73	True	TATAAA	-25	NA	73752207	73768776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
Isoform_16634_4	chr13	+	2651	2	FSM	ENSMUSG00000021611.10	ENSMUST00000223196.2	2663	2	2	10	2	-10	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGATAAATGAAAAAAAAAA	2125	False	NA	NA	False	NA	NA	NA	73775031	73777784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73775368_73775469
Isoform_16635_15	chr13	+	4286	17	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	8.80318656794232	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTGTCATACTAATTC	2124	False	NA	NA	False	AATAAA	-15	NA	73775030	73797961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028_73797674_73797703
Isoform_16636_6	chr13	+	2821	11	ISM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	45	14182	13	1232	intron_retention	FALSE	canonical	3	635	junction_9	62.6377681594739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	73911870	73946295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885
Isoform_16637_3	chr13	+	2166	12	ISM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	-2	14182	-2	1232	5prime_fragment	FALSE	canonical	3	635	junction_9	62.4841136834789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	73911823	73946295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645
Isoform_16638_5	chr13	+	2661	18	NIC	ENSMUSG00000017756.10	novel	3242	23	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	177.258495972587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGGTATGCTCATGTC	NA	False	NA	NA	False	AAAAAG	-17	NA	73911822	73950716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73950359
Isoform_16639_4	chr13	+	3261	23	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	31	3020	5	-2	5prime_fragment	FALSE	canonical	3	635	junction_9	58.768789856156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCTGACTCCTCTTGT	NA	False	NA	NA	False	NA	NA	NA	73911846	73961853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657
Isoform_1664_13	chr10	-	4005	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	38	1984	-21	-5	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAGAAAAACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	83369966	83325297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
Isoform_16640_204	chr13	+	5133	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	8	1	-2	-1	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTGTGCCTCATTTCC	NA	False	NA	103	True	AGTAAA	-28	NA	73911823	73964872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
Isoform_16641_21	chr13	+	5205	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-64	1	-64	-1	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTGTGCCTCATTTCC	NA	False	NA	103	True	AGTAAA	-28	NA	73911751	73964872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
Isoform_16645_3	chr13	+	5215	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.450853460203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTAAGGAACTTCGT	NA	False	NA	90	True	AGTAAA	-15	NA	73911836	73964859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944777_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
Isoform_1665_42	chr10	-	3055	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	28	2944	28	-965	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAACCTCTTTTTA	NA	False	NA	-19	True	AAGAAA	-24	NA	83369976	83326257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
Isoform_16656_12	chr13	+	2410	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGAGTACCTGTTTGT	NA	False	NA	18	True	TATAAA	-25	NA	74085934	74108935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_16657_5	chr13	+	2480	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	3	-5	combination_of_known_junctions	TRUE	canonical	3	32	junction_6	34.8873743478768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACTCTGATCACCCCGT	NA	False	NA	18	True	AATAAA	-15	NA	74085932	74109003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_16658_41	chr13	+	2345	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-10	72	7	6	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCTGTTTGTATTTATA	NA	False	NA	25	True	TATAAA	-32	NA	74085946	74108942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_16659_15	chr13	+	2417	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-10	0	7	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085946	74109014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_1666_5	chr10	-	2730	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484528	83435898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_16661_9	chr13	+	2337	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	17	76	7	1	multi-exon	FALSE	canonical	3	18	junction_6	38.2023850331654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTACCTGTTTGTAT	NA	False	NA	20	True	TATAAA	-27	NA	74085946	74108937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_16663_4	chr13	+	2418	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	10	2	0	-2	multi-exon	FALSE	canonical	3	18	junction_6	38.2023850331654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACCCCGTCCGCTTTG	NA	False	NA	26	True	AATAAA	-23	NA	74085939	74109011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
Isoform_16664_61	chr13	+	3401	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	6116	0	-1028	multi-exon	FALSE	canonical	3	416	junction_2	9.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGATTTGTTTCTCA	4392	False	NA	9	True	AATAAA	-20	NA	74498469	74507786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74498528_74500974_74501106_74504574
Isoform_16666_6	chr13	+	3330	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	15	6214	7	-1126	multi-exon	FALSE	canonical	3	416	junction_2	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGAGTTTAGCCACACT	4365	False	NA	-89	True	AATAAA	-4	NA	74498442	74507688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74498528_74500974_74501106_74504574
Isoform_16667_19	chr13	+	1186	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	15	8358	7	377	multi-exon	FALSE	canonical	3	416	junction_2	9.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAATGTTTTCTCAGTT	4365	False	NA	NA	False	AATACA	-13	NA	74498442	74505544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74498528_74500974_74501106_74504574
Isoform_1667_86	chr10	-	2977	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	41	2	-22	-2	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484561	83435898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_16675_5	chr13	+	2960	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	304	2380	-1	-2380	multi-exon	TRUE	canonical	1	4	junction_16	2.26077666104176	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAAGATATTTTCTTAT	NA	False	NA	NA	False	ACTAAA	-19	NA	74787990	74838940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
Isoform_16676_3	chr13	+	2591	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	87	2362	-3	-2362	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGTGTTTAAGAGTAT	NA	False	NA	NA	False	AATGAA	-18	NA	75238031	75280618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
Isoform_16677_6	chr13	+	1053	3	FSM	ENSMUSG00000001542.8	ENSMUST00000221432.2	511	3	-207	-335	-81	335	multi-exon	FALSE	canonical	3	343	junction_2	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAGAAGACAAAA	6199	False	NA	NA	False	AATAAA	-10	NA	75855622	75895121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_75855917_75873071_75873120_75894410
Isoform_1668_3	chr10	-	3058	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	-40	2	-40	-2	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484642	83435898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_16683_45	chr13	+	3627	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	748	7	-80	-7	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGTGAATAATTTTG	6200	False	NA	NA	False	AATAAA	-22	NA	75855623	75920476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
Isoform_16686_3	chr13	+	3461	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-81	-10	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	126.162434979672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAATAAGTGAATAATT	6199	False	NA	NA	False	AATAAA	-19	NA	75855622	75920473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
Isoform_16687_92	chr13	+	1303	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	39	3	-3	-3	multi-exon	FALSE	canonical	3	287	junction_1	16	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTTTTGTCCGGTTC	NA	False	NA	27	True	ATTAAA	-19	NA	75988025	75998267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_75988295_75995288_75995418_75997362
Isoform_16688_12	chr13	+	1299	3	NNC	ENSMUSG00000021591.9	novel	1345	3	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	128	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTTTTGTCCGGTTC	NA	False	NA	27	True	ATTAAA	-19	NA	75988025	75998267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_75988295_75995288_75995418_75997366
Isoform_16689_3	chr13	+	3481	2	ISM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	63	85165	63	-24778	5prime_fragment	FALSE	canonical	3	143	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATAC	NA	False	NA	NA	False	ATTAAA	-24	NA	76246915	76250937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_76246949_76247489
Isoform_16690_6	chr13	+	408	5	ISM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	62	79700	62	-19313	5prime_fragment	FALSE	canonical	3	143	junction_1	14.0534693225552	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGGTATTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	76246914	76256402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311
Isoform_16691_4	chr13	+	619	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	0	-3	0	3	multi-exon	FALSE	canonical	3	44	junction_1	11	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGACTTACACTGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	77283669	77332126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_77283750_77322971_77323104_77331719
Isoform_16695_15	chr13	+	3862	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	29	1	0	-1	multi-exon	TRUE	canonical	3	89	junction_7	8.92907582349531	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAACTGTGTCTTCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	77856837	78314353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
Isoform_16697_73	chr13	+	4096	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	2	3	2	-3	multi-exon	TRUE	canonical	3	173	junction_5	15.8461995701281	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81031530	81044158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
Isoform_167_3	SIRV10001	+	3565	1	FSM	SIRV10001A	SIRV10001	9941	1	0	6376	0	-6376	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACAATTCATAGAATC	NA	False	NA	NA	False	NA	NA	NA	0	3565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10001_+_0_3600
Isoform_1670_3	chr10	-	4221	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	13	-5	intron_retention	FALSE	canonical	3	74	junction_1	12.6836645438291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGCTTATTGTGGTT	NA	False	NA	-5	True	AATAAA	-13	NA	83484589	83435901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_16700_6	chr13	+	2974	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	-8	1284	-8	403	multi-exon	FALSE	canonical	3	66	junction_2	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATGCA	281	False	NA	NA	False	NA	NA	NA	81805773	81819706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81806056_81813123_81813389_81817279
Isoform_16701_7	chr13	+	2878	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	90	1282	-39	405	multi-exon	FALSE	canonical	3	66	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGCAGA	379	False	NA	NA	False	NA	NA	NA	81805871	81819708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81806056_81813123_81813389_81817279
Isoform_16703_3	chr13	+	2829	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-86	-405	-49	405	multi-exon	FALSE	canonical	2	14	junction_2	38	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGCAGA	369	False	NA	NA	False	NA	NA	NA	81805861	81819708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81806056_81813123_81813389_81817338
Isoform_16704_9	chr13	+	1415	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-243	2785	-243	144	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81859216	81898609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81860102_81898079
Isoform_16707_193	chr13	+	801	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	187	238	-14	1	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTGGTGTATGTTAT	NA	False	NA	22	True	TATAAA	-15	NA	81931382	81945036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_16708_29	chr13	+	1036	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	181	9	-20	-9	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATGACAATAGTC	NA	False	NA	NA	False	AATAAA	-6	NA	81931376	81945265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_16709_49	chr13	+	918	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	187	121	-14	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	8	True	AATAAA	-19	NA	81931382	81945153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
Isoform_1671_9	chr10	-	1525	10	ISM	ENSMUSG00000020263.15	ENSMUST00000147582.8	3377	14	6	7920	1	694	5prime_fragment	FALSE	canonical	3	97	junction_4	6.21825270205921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACACATAGTGCCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	83484528	83449428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
Isoform_16711_36	chr13	+	2582	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	3	272	3	-1	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGTAATTTATTTGT	NA	False	NA	20	True	ATTAAA	-21	NA	84370421	84443988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_16713_6	chr13	+	2538	12	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	69.776028941722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGTAATTTATTTGT	NA	False	NA	20	True	ATTAAA	-21	NA	84370427	84443988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
Isoform_16714_10	chr13	+	2046	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	3	-4	3	4	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTTGTTTTGATGTT	NA	False	NA	12	True	AATAAA	-23	NA	85337529	85361846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16716_122	chr13	+	1210	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	20	815	-7	-2	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTTGTGATTGTTT	NA	False	NA	13	True	ATTAAA	-20	NA	85337546	85361027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16721_3	chr13	+	1264	10	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	399.777561608242	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTTGTGATTGTTT	NA	False	NA	13	True	ATTAAA	-20	NA	85337555	85361027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359411_85359475_85359972_85360034_85360858
Isoform_16722_17	chr13	+	1083	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-32	4	-3	1	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTCTTTGTGATTGT	NA	False	NA	11	True	ATTAAA	-18	NA	85337563	85361025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16723_3	chr13	+	1926	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-58	-813	11	0	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337537	85361842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16724_3	chr13	+	1004	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337564	85361019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16725_3	chr13	+	921	7	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-11	-5	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	342.421118248017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337542	85361019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_85337772_85338872_85338996_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
Isoform_16727_3	chr13	+	2077	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	596	6016	-15	1580	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAACACTGACTCCTGT	NA	False	NA	NA	False	TATAAA	-24	NA	90237837	90254360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16728_101	chr13	+	523	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7555	0	41	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237852	90252821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16729_5	chr13	+	1136	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	587	6966	-24	630	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGGGTACTATGCTCT	NA	False	NA	6	True	TATAAA	-19	NA	90237828	90253410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_1673_217	chr10	-	3048	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	41	0	15	0	multi-exon	FALSE	canonical	3	271	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84369885	84362168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84364642_84369310
Isoform_16730_38	chr13	+	746	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7332	0	264	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTACCTCTATTCTT	NA	False	NA	4	True	TTTAAA	-16	NA	90237852	90253044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16731_9	chr13	+	668	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	588	7433	-23	163	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGACTGGCCTATTTTTA	NA	False	NA	10	True	NA	NA	NA	90237829	90252943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16735_8	chr13	+	788	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	569	7332	-42	264	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTACCTCTATTCTT	NA	False	NA	4	True	TTTAAA	-16	NA	90237810	90253044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16736_19	chr13	+	575	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	559	7555	-52	41	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237800	90252821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
Isoform_16740_4931	chr13	+	505	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	207	225	-52	1	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	4931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTGTCTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	91071283	91072844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
Isoform_16741_1211	chr13	+	534	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	178	225	-81	1	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTGTCTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	91071254	91072844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
Isoform_16747_20	chr3	+	463	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	11	-49	11	49	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAT	7675	False	NA	NA	False	AATAAA	-15	NA	37768899	37769362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37768900_37769400
Isoform_16751_16	chr13	+	2209	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	411	2727	411	-2727	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92491644	92522834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
Isoform_16752_89	chr13	+	1562	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	3365	420	-3365	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCATCTCAGCAGGGT	NA	False	NA	18	True	AATAAA	-21	NA	92491653	92522196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
Isoform_16753_147	chr13	+	754	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	423	4170	423	-4170	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATGAGTAATTATTTC	NA	False	NA	27	True	NA	NA	NA	92491656	92521391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
Isoform_16763_19	chr13	+	5371	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	-7	2	-7	-2	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTTGTTTGTTTTCT	NA	False	NA	3	True	AATAAA	-13	NA	92747591	92848453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
Isoform_16765_5	chr13	+	4199	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-699	-448	-2	339	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93440607	93540637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
Isoform_16767_9	chr13	+	4159	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1062	-332	-5	332	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATCCAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-45	NA	93440604	93540630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
Isoform_16769_4	chr13	+	4366	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-17	-1	-17	1	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2209	False	NA	10	True	ATTAAA	-19	NA	94194286	94331918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
Isoform_1677_48	chr10	-	3154	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-65	0	-65	0	multi-exon	FALSE	canonical	3	271	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84369991	84362168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84364642_84369310
Isoform_16771_74	chr13	+	2093	17	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	23	93387	23	-71391	5prime_fragment	FALSE	canonical	3	310	junction_8	46.1244495224604	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGACCTTTCTGAGAT	NA	False	NA	NA	False	AATAGA	-6	NA	94495490	94609438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306
Isoform_16776_78	chr13	+	3973	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	47	1	47	-1	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495514	94702824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
Isoform_16777_449	chr13	+	525	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	10	24	10	0	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTGTTTGTTTTATA	NA	False	NA	13	True	AATAAA	-13	NA	94925427	94979406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
Isoform_16779_60	chr13	+	3030	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGGGTTTGTTTTT	NA	False	NA	14	True	AATATA	-15	NA	95112883	95159820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
Isoform_16784_19	chr13	+	1981	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-86	-1	-86	1	multi-exon	FALSE	canonical	3	65	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461658	95474350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_95461853_95472563
Isoform_16788_4	chr13	+	2244	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-349	-1	-349	1	multi-exon	FALSE	canonical	3	65	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461395	95474350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_95461853_95472563
Isoform_16789_4	chr13	+	2306	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-411	-1	-411	1	multi-exon	FALSE	canonical	3	65	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	False	NA	39	True	NA	NA	NA	95461333	95474350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_95461853_95472563
Isoform_16790_111	chr13	+	2286	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	2868	29	-2317	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCCTGCCAGTGATT	NA	False	NA	NA	False	ATTAAA	-29	NA	96524830	96551377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_16791_21	chr13	+	2999	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	2155	29	-1604	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGAATATTTGTCTCT	NA	False	NA	16	True	AATAAA	-28	NA	96524830	96552090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_16794_3	chr13	+	4619	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	35	529	-31	22	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGATGTGTATGTCTGG	NA	False	NA	NA	False	ATTAAA	-38	NA	96524836	96553716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
Isoform_16796_6	chr13	+	3199	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	8	-461	-3	-4	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATCAGACTGTTTGA	NA	False	NA	NA	False	AATATA	-16	NA	96679250	96774519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_16797_4	chr13	+	4017	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	1	1267	1	885	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATTTTATTTTGCA	NA	False	NA	11	True	AAAAAG	-17	NA	96679243	96775408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_16798_7	chr13	+	3129	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	0	2156	0	-4	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATCAGACTGTTTGA	NA	False	NA	NA	False	AATATA	-16	NA	96679242	96774519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
Isoform_168_7	SIRV10001	+	4764	1	FSM	SIRV10001A	SIRV10001	9941	1	5177	0	5177	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	5177	9941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10001_+_5200_9900
Isoform_1680_7	chr10	-	2030	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-65	1437	-65	257	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATTCTCAGCTGACCT	NA	False	NA	NA	False	AATAAA	-44	NA	84938424	84933587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84935353_84938159
Isoform_16801_3	chr13	+	5084	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	10	-7	10	7	multi-exon	FALSE	canonical	3	6	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGGACTTGTGAGCT	NA	False	NA	NA	False	AATAAA	-19	NA	97061206	97087421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97061457_97072387_97072505_97082704
Isoform_16802_3	chr13	+	4597	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-58	8	-58	-8	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGAATGTCAGTCTT	8659	False	NA	6	True	AATAAA	-12	NA	97208092	97266015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_16803_3	chr13	+	2227	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-60	2380	-60	-2380	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCCACTGGAACTT	8657	False	NA	20	True	AATAAA	-25	NA	97208090	97263643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
Isoform_16804_42	chr13	+	3116	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274484	97312950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_16806_91	chr13	+	3128	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	20	9	0	1	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274505	97312950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_16809_5	chr13	+	3039	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAACAGCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	97274510	97312947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_1681_3	chr10	-	2994	2	FSM	ENSMUSG00000049038.4	ENSMUST00000214607.2	477	2	-1409	-1108	9	-7	multi-exon	FALSE	canonical	3	50	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAACTATTATTCCAAA	NA	False	NA	-5	True	AATAAA	-16	NA	84963850	84955303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84956679_84962231
Isoform_16810_5	chr13	+	3473	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	51.2320944330797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGCCTAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	97274501	97312950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
Isoform_16812_6	chr13	+	4743	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	-6	0	6	multi-exon	FALSE	canonical	3	5	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTGTGAGTTTTTATT	NA	False	NA	28	True	AATAAA	-22	NA	97377612	97389548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_16813_20	chr13	+	2471	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	2266	0	-2266	multi-exon	FALSE	canonical	3	5	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTTGTCTGGTAATTG	NA	False	NA	NA	False	AATATA	-42	NA	97377612	97387276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_16814_12	chr13	+	2862	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	1875	0	-1875	multi-exon	FALSE	canonical	3	5	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATGTGTTCTAGAT	NA	False	NA	NA	False	TTTAAA	-15	NA	97377612	97387667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_16815_7	chr13	+	4617	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	126	-6	126	6	multi-exon	FALSE	canonical	3	5	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTGTGAGTTTTTATT	NA	False	NA	28	True	AATAAA	-22	NA	97377738	97389548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97378038_97381478_97383293_97387044
Isoform_16818_28	chr13	+	2713	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	50	1	50	-1	multi-exon	FALSE	canonical	3	54	junction_2	70.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCGAACTCAAGACCT	NA	False	NA	20	True	AATAAA	-17	NA	97619258	97633514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_97619286_97619456_97619541_97630912
Isoform_1682_13	chr10	-	1530	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	26	11	-6	-11	multi-exon	FALSE	canonical	3	41	junction_2	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTGGAACTATTATTC	NA	False	NA	-9	True	AATAAA	-12	NA	84963865	84955307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84956679_84962231_84962351_84963825
Isoform_16821_9	chr13	+	2633	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAACTCAAGACCTCTTCC	NA	False	NA	25	True	AATAAA	-22	NA	97619259	97633519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_97619286_97630912
Isoform_16823_8	chr13	+	1877	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-127	5	-24	-5	multi-exon	TRUE	canonical	3	142	junction_1	23.3559414282533	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399622	98410421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_16824_4	chr13	+	1892	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	62.5658403204177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399620	98410421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_16825_4	chr13	+	1463	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	8	5	8	-5	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399654	98410421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
Isoform_16826_15	chr13	+	1966	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGTGTGGTGTGATT	NA	False	NA	19	True	AATAAA	-14	NA	99481298	99552069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_16828_297	chr13	+	1842	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	7	0	5	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481300	99552070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_16829_12	chr13	+	1711	9	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	145.098027209194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGTGTGGTGTGATT	NA	False	NA	19	True	AATAAA	-14	NA	99481300	99552069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_99481384_99484839_99484918_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
Isoform_1683_421	chr10	-	3013	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	12	1	12	-1	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGTGTACTTGTGTTCA	NA	False	NA	-6	True	ATTAAA	-18	NA	85020916	84967564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
Isoform_16830_7	chr13	+	537	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	58	6	-15	1	multi-exon	FALSE	canonical	3	69	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATTGGTGAATATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	100244577	100250740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100244738_100245530_100245640_100250472
Isoform_16833_307	chr13	+	1214	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	9	-1	3	1	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGACTTTATAGATAT	NA	False	NA	18	True	AATAAA	-14	NA	100261368	100274199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
Isoform_16834_360	chr13	+	1204	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	19	-1	0	1	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100787869	100792568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100787954_100790698_100790792_100791541
Isoform_16836_13	chr13	+	1737	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	19	-534	0	534	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTCT	NA	False	NA	NA	False	NA	NA	NA	100787869	100793101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100787954_100790698_100790792_100791541
Isoform_16837_188	chr13	+	915	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	0	0	0	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATCTCTTTAATAGTA	NA	False	NA	37	True	AATAAA	-14	NA	100787869	100802867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
Isoform_16838_53	chr13	+	959	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	-44	0	44	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAGATACATGGTCA	NA	False	NA	-3	True	GATAAA	-7	NA	100787869	100802911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
Isoform_16840_39	chr13	+	1213	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	18	-1	0	0	multi-exon	FALSE	canonical	3	171	junction_1	554	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100788132	100792568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100788226_100790698_100790792_100791541
Isoform_16845_16	chr13	+	1282	3	FSM	ENSMUSG00000052293.15	ENSMUST00000185767.7	778	3	41	-545	0	0	multi-exon	FALSE	canonical	3	39	junction_1	620	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100788132	100792568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_100788295_100790698_100790792_100791541
Isoform_16851_29	chr13	+	3788	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	14	-754	14	754	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATTTTGTCTTTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	104246262	104278997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
Isoform_16852_3	chr13	+	3772	11	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-14	754	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	23.9893726470702	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATTTTGTCTTTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	104246266	104278997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268572_104268673_104268737_104271111_104271150_104271347_104271432_104276247
Isoform_16854_16	chr13	+	3777	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	43	-404	1	49	multi-exon	FALSE	canonical	3	141	junction_1	34.1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCTAGTTAACAATTTA	NA	False	NA	51	True	AATAAA	-15	NA	104315347	104339929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_16855_20	chr13	+	3239	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	10	167	10	-167	multi-exon	FALSE	canonical	3	141	junction_1	34.1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGACTTTGAATTGT	NA	False	NA	3	True	AATAAA	-14	NA	104315314	104339358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_16857_19	chr13	+	3375	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	40	1	-2	-1	multi-exon	FALSE	canonical	3	141	junction_1	34.1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGACTGTGACGTAT	NA	False	NA	10	True	AATATA	-24	NA	104315344	104339524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
Isoform_16860_61	chr13	+	990	10	NIC	ENSMUSG00000021714.16	novel	1306	10	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGGCATAGTTTGTC	NA	False	NA	4	True	AATAAA	-15	NA	104365462	104386119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
Isoform_16861_6	chr13	+	1012	10	FSM	ENSMUSG00000021714.16	ENSMUST00000224500.2	1353	10	335	6	-9	-6	multi-exon	FALSE	canonical	3	57	junction_4	127.2119840616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGGCATAGTTTGTC	NA	False	NA	4	True	AATAAA	-15	NA	104365453	104386119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370741_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
Isoform_16866_25	chr13	+	509	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	59	1797	-3	-883	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAGAAGAGA	NA	False	NA	NA	False	AAAAAG	-38	NA	104953743	104973985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
Isoform_16868_152	chr13	+	1217	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-6	840	-2	-840	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083660	107095428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_1687_5	chr10	-	4012	11	ISM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-56	-1	4	-1	intron_retention	FALSE	canonical	3	192	junction_3	16.7403703662733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752846	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387
Isoform_16871_4	chr13	+	2067	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-8	-8	-4	8	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTTCCTTCAAAAT	NA	False	NA	NA	False	AGTAAA	-21	NA	107083658	107096276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_16875_4	chr13	+	2093	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-33	-9	-1	9	multi-exon	TRUE	canonical	3	504	junction_4	50.5395680025492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTTCCTTCAAAATC	NA	False	NA	NA	False	AGTAAA	-22	NA	107083633	107096277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_16878_8	chr13	+	1311	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	7	-840	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083641	107095428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
Isoform_16879_45	chr13	+	1901	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	15	2	11	-2	multi-exon	FALSE	canonical	3	97	junction_1	47	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTCCTGAGTTTTTGT	NA	False	NA	NA	False	AATAAA	-42	NA	108180994	108185704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108181021_108182958_108183103_108183973
Isoform_1688_178	chr10	-	3914	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-36	-1	24	-1	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752826	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16880_9	chr13	+	2015	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	4	-927	1	-6	multi-exon	FALSE	canonical	3	16	junction_1	87.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGAGGTCCTGAGTTT	NA	False	NA	NA	False	AATAAA	-38	NA	108181023	108185700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108181168_108182958_108183103_108183973
Isoform_16881_18	chr13	+	2093	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	0	4	0	-4	multi-exon	FALSE	canonical	3	27	junction_1	82	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGGTCCTGAGTTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	108181022	108185702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108181243_108182958_108183103_108183973
Isoform_16886_15	chr13	+	2107	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	3	1	3	-1	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTCTTTCCTTTCCTTG	NA	False	NA	6	True	ATTAAA	-17	NA	108295274	108331518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_16888_4	chr13	+	1548	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	-1	848	-1	-461	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCTCCTTGAGCGC	NA	False	NA	15	True	AATATA	-24	NA	108295263	108331050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
Isoform_16889_16	chr13	+	2046	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	25	1942	19	-332	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACACTGAATTATGAT	NA	False	NA	NA	False	AATAAA	-25	NA	108350962	108420275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_1689_5	chr10	-	4033	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-157	1	55	-1	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGGAATTTGTCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	85752947	85727834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16890_4	chr13	+	2516	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	33	1464	27	146	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108350970	108420753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
Isoform_16893_3	chr13	+	4190	2	FSM	ENSMUSG00000021697.13	ENSMUST00000168037.2	674	2	-15	-3501	-15	3501	multi-exon	FALSE	canonical	3	120	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAAACAA	2868	False	NA	NA	False	NA	NA	NA	108452886	108464512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108453004_108460439
Isoform_16895_44	chr13	+	2493	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	49	21	1	-21	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATACT	2896	False	NA	18	True	AATAAA	-25	NA	108452914	108526098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
Isoform_16896_42	chr13	+	2522	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	16	25	16	-25	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	2863	False	NA	14	True	AATAAA	-21	NA	108452881	108526094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
Isoform_16897_4	chr13	+	3054	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-251	-680	-251	570	multi-exon	TRUE	canonical	1	3	junction_1	7.84544583871199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCACTGGTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	109769062	110088578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_1690_5	chr10	-	3806	12	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	62.8899077425605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752885	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752838
Isoform_16901_3	chr13	+	2633	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	159	1415	159	572	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCACTGGTTTTTGTTTT	NA	False	NA	NA	False	TTTAAA	-32	NA	110039798	110088580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
Isoform_16903_106	chr13	+	2796	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	2	2	0	-2	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGGTCTCCTGTCCTT	NA	False	NA	4	True	AATAAA	-15	NA	110531581	110537376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
Isoform_16904_3	chr13	+	1265	3	ISM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	26	1518	26	477	5prime_fragment	FALSE	canonical	3	32	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGTATGAGTTTTTC	887	False	NA	NA	False	NA	NA	NA	111716820	111779846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_111716936_111717450_111717511_111778756
Isoform_16905_4	chr13	+	643	4	FSM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	-10	-12	-10	12	multi-exon	FALSE	canonical	3	14	junction_3	8.73053390247253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTGTGTACAGATTT	851	False	NA	9	True	NA	NA	NA	111716784	111781376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_111716936_111717450_111717511_111778756_111779023_111781210
Isoform_16909_7	chr13	+	5130	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	147	2	0	1	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTCGTGTGACT	NA	False	NA	7	True	AATAAA	-15	NA	111822858	111855128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
Isoform_1691_3	chr10	-	3757	11	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	65.5191575037408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752803	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85752387_85752594_85752671
Isoform_16914_45	chr13	+	5409	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	21	3248	10	-22	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTCGTATTCTTTCGT	NA	False	NA	13	True	AATAAA	-14	NA	112600624	112643372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
Isoform_16916_9	chr13	+	2259	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	18	498	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCTTCTGCATAGCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	112600663	112620648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
Isoform_16918_6	chr13	+	2261	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	6648	1	-6642	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTTCCATGGCATC	NA	False	NA	13	True	AGTAAA	-19	NA	112797300	112868635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
Isoform_16919_3	chr13	+	3216	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	-5	5699	-5	-5693	multi-exon	TRUE	canonical	3	26	junction_2	7.31122983038101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-39	NA	112797294	112869584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
Isoform_1692_6	chr10	-	3942	13	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	76.6399862995812	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752801	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16920_7	chr13	+	1722	7	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	15	-13	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	133.866123006864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTGGGAAGCGTTTG	9652	False	NA	1	True	AATAAA	-16	NA	112937340	113004415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_112937801_112971392_112971548_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_16921_121	chr13	+	1559	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	29	10	29	-10	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9666	False	NA	4	True	AATAAA	-19	NA	112937354	113004418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_16925_25	chr13	+	1556	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-42	-242	29	-10	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9666	False	NA	4	True	AATAAA	-19	NA	112937354	113004418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_16927_42	chr13	+	1404	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	29	-10	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGAAGCGTTTGTAG	9666	False	NA	4	True	AATAAA	-19	NA	112937354	113004418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_1693_40	chr10	-	3970	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	-11	3	-11	-1	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752861	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16930_21	chr13	+	1061	3	FSM	ENSMUSG00000042426.7	ENSMUST00000223866.2	1736	3	30	645	30	-645	multi-exon	FALSE	canonical	3	291	junction_2	16	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATAGAAAAATGTGTACT	NA	False	NA	NA	False	ATTAAA	-22	NA	113064211	113068066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_113064508_113066160_113066235_113067375
Isoform_16937_61	chr13	+	4453	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	229	0	35	0	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064216	113105966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
Isoform_16939_3	chr13	+	606	3	ISM	ENSMUSG00000042348.11	ENSMUST00000224858.2	1966	6	-45	233448	43	-232724	5prime_fragment	FALSE	canonical	3	25	junction_1	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAATATTAG	NA	False	NA	NA	False	TTTAAA	-19	NA	113931083	114059088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_113931233_114037538_114037690_114058782
Isoform_1694_4	chr10	-	3955	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	85.7627541535368	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATGGAATTTGTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	85752796	85727835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16940_7	chr13	+	498	2	ISM	ENSMUSG00000042348.11	ENSMUST00000224068.2	1002	4	-114	232721	3	-232721	5prime_fragment	FALSE	canonical	3	349	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATATTAGCAC	NA	False	NA	NA	False	TTTAAA	-22	NA	113931043	114059091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_113931233_114058782
Isoform_16941_29	chr13	+	1849	4	ISM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	20	188408	20	-186223	5prime_fragment	FALSE	canonical	3	349	junction_1	12.0277457017791	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	113931060	114105589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117
Isoform_16943_3	chr13	+	1960	5	NNC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	21	-186223	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	183.762584603069	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	113931061	114105589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_113931233_113944138_113944251_114058782_114058928_114070599_114070660_114104117
Isoform_16944_3	chr13	+	1344	3	FSM	ENSMUSG00000015536.15	ENSMUST00000165669.9	469	3	27	-902	0	-18	multi-exon	FALSE	canonical	3	133	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGATAGGAA	NA	False	NA	NA	False	NA	NA	NA	114954806	114958506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_114954860_114955871_114955994_114957337
Isoform_16947_69	chr13	+	1171	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	-19	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954793	114965259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_16948_6	chr13	+	1456	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	-19	-285	0	2	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATCCAGTTTTTGATT	NA	False	NA	NA	False	ATTAAA	-22	NA	114954793	114965544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_16949_8	chr13	+	1059	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	-11	807	4	0	multi-exon	TRUE	canonical	3	20	junction_1	59.3450924677011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954783	114965259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
Isoform_1695_4	chr10	-	3807	11	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	67.9223085591178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752839	85727833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16950_44	chr13	+	2259	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	348	316	-96	-316	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCCTTGTGCTGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	117357155	117410635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_16951_54	chr13	+	2163	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	444	316	0	-316	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCCTTGTGCTGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	117357251	117410635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_16954_4	chr13	+	1621	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	298	1004	-146	-1004	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAAGTGTTTGCCT	NA	False	NA	16	True	ATTAAA	-17	NA	117357105	117409947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_16957_8	chr13	+	2279	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	325	319	-119	-319	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTGCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	117357132	117410632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
Isoform_16958_5	chr13	+	1702	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-184	7	-184	-7	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119564952	119593920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_16959_9	chr13	+	1559	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-41	7	-41	-7	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565095	119593920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_1696_3	chr10	-	4096	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	64.5122834097802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752889	85727832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
Isoform_16961_30	chr13	+	1731	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-14	834	-14	-7	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565443	119593920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_16963_7	chr13	+	1983	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-225	-27	-14	-7	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565443	119593920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_16965_17	chr13	+	2564	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	1	0	1	0	multi-exon	TRUE	canonical	3	76	junction_1	23.5189049253763	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599304	119622653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_16968_15	chr13	+	2501	13	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	29.2546292633035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599304	119622653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
Isoform_16971_11	chr13	+	3404	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151976	120169614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_16974_30	chr13	+	3337	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-55	182	30	-4	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151944	120169614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_16975_76	chr13	+	3282	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	0	182	0	-4	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151999	120169614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_1698_1778	chr10	-	1993	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	16	0	16	0	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	1778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793671	85774500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
Isoform_16983_126	chr13	+	3246	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-5	4	-5	-4	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCAGCTCTTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	120151976	120169614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
Isoform_16989_24	chr13	+	3260	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	-1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35922439	36058045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16991_4	chr13	+	3051	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	106.629681087814	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922439	36058047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36055560_36055705_36056494
Isoform_16992_48	chr13	+	3187	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922439	36058047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16994_3	chr13	+	2547	4	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	115.18969861349	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGTGTTTCTCTGCGTG	NA	False	NA	20	True	AATAAA	-21	NA	35922439	36058048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_35922622_35999891_36000559_36055560_36055705_36056494
Isoform_16995_18	chr13	+	2405	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90751	-1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	36037545	36058045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16996_16	chr13	+	2446	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90712	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	36037506	36058047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
Isoform_16997_26	chr13	+	533	3	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66773921	66783138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_66774068_66782550_66782678_66782878
Isoform_16999_20	chr13	+	464	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	720	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	5534	False	NA	10	True	NA	NA	NA	66711973	66724695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
Isoform_170_11	SIRV10001	+	2719	1	FSM	SIRV10001A	SIRV10001	9941	1	7222	0	7222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	7222	9941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10001_+_7200_9900
Isoform_17000_18	chr13	+	556	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47306	25	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	22.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66439389	66453252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66439588_66448255_66448445_66453083
Isoform_17001_5	chr13	+	582	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47303	-4288	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	66439386	66448939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66439588_66448255_66448445_66448747
Isoform_17002_8	chr13	+	4728	34	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	canonical	1	66	junction_1	364.511447064866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTGGAAGTAGTTATT	NA	False	NA	27	True	ATTAAA	-28	NA	49835711	49887740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_49836121_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
Isoform_17005_4	chr13	+	3222	7	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-34	-17157	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	80.8532621481657	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAGAAGGTACAG	NA	False	NA	NA	False	AATATA	-34	NA	55359597	55408246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156
Isoform_17006_5	chr13	+	1860	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74246	-3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGTGTGGGCATAATT	NA	False	NA	20	True	AATAAA	-44	NA	21120556	21208419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
Isoform_17008_3	chr13	+	1421	2	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	49121627	49123381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_49122081_49122413
Isoform_17009_6	chr13	+	1139	3	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	41	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	49121867	49123381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_49122081_49122413_49122767_49122808
Isoform_17010_6	chr13	+	1233	2	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTGCTTTCCCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	49121815	49123381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_49122081_49122413
Isoform_17011_3	chr13	+	1319	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-326192	288	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	221.287645887027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTAATGGTGT	NA	False	NA	6	True	NA	NA	NA	61919369	62260149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_61919514_62254561_62254689_62254881_62254943_62259162
Isoform_17013_6	chr13	+	755	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	1	686	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76328544	76336829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_17015_5	chr13	+	1993	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	-18	-177	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76328525	76338048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
Isoform_17016_4	chr13	+	2101	11	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTGCTAGCTGG	NA	False	NA	102	True	AATAAA	-29	NA	119565463	119593920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
Isoform_17017_3	chr13	+	1925	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-569	-1917	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	56585598	56620135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742
Isoform_17018_3	chr13	+	2285	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-572	-2338	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5.67340285895511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAATGTGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	56585595	56619714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
Isoform_17019_6	chr13	+	4537	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGCTGTGAACTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	51254888	51306583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
Isoform_17020_4	chr13	+	553	3	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	-81618	-1201	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	37	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	NA	False	NA	NA	False	NA	NA	NA	66098404	66186860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_66098504_66186206_66186334_66186533
Isoform_17021_3	chr13	+	856	3	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	11	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	61765181	61779801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_61765281_61776870_61776998_61779171
Isoform_17024_3	chr13	+	1290	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118707	288	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTAATGGTGT	1160	False	NA	6	True	NA	NA	NA	62126854	62260149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
Isoform_17026_3	chr13	+	1108	5	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	-1567	-13	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	139.925873232937	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTGGGAAGCGTTTG	8070	False	NA	1	True	AATAAA	-16	NA	112935758	113004415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_112935912_112993279_112993561_112996177_112996236_113003329_113003507_113003976
Isoform_17027_4	chr13	+	855	2	Antisense	novelGene_ENSMUSG00000021375.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCATTAATTTGTGTC	NA	False	NA	NA	False	AATAAA	-43	NA	46966182	46969128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_+_46966409_46968499
Isoform_17028_3	chr13	+	991	6	NNC	ENSMUSG00000021420.14	novel	726	5	NA	NA	-11723	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	93.2660710011953	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36404381	36721567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_36404475_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
Isoform_17029_3	chr13	+	439	3	NNC	ENSMUSG00000113081.2	novel	1044	3	NA	NA	-8150	2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	232	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGCAGGTATCTGAATT	NA	False	NA	15	True	NA	NA	NA	62403229	62421103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_62403345_62420579_62420707_62420906
Isoform_17030_3	chr13	+	351	2	Antisense	novelGene_ENSMUSG00000113755.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAGAAAAAAAAAAAA	9571	False	NA	NA	False	NA	NA	NA	9103535	9360241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_+_9103724_9360078
Isoform_17031_3	chr13	+	613	2	Antisense	novelGene_ENSMUSG00000095930.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACGCCAGCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	120204480	120207619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_+_120204630_120207155
Isoform_17034_5	chr13	+	1339	1	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	30	-62545	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACAACGTGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	13612165	13613504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_13612200_13613500
Isoform_17035_18	chr13	-	187	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5574	False	NA	NA	False	NA	NA	NA	38032403	38032216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_38032200_38032400
Isoform_17036_11	chr13	+	226	1	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTGAACCATATGGTT	NA	False	NA	NA	False	NA	NA	NA	66043574	66043800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_66043600_66043800
Isoform_17037_5	chr13	-	692	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCACTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	66175285	66174593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_66174600_66175300
Isoform_17038_3	chr13	+	995	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAAATGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66395992	66396987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_66396000_66397000
Isoform_17040_3	chr13	-	179	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13850050	13849871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_13849900_13850000
Isoform_17042_6	chr13	-	219	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGAACCATATGGTTA	NA	False	NA	NA	False	NA	NA	NA	67011599	67011380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_67011400_67011600
Isoform_17043_3	chr13	-	195	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATACCTGACTCAA	NA	False	NA	NA	False	NA	NA	NA	14009481	14009286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_14009300_14009500
Isoform_17044_7	chr11	-	178	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23162030	23161852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_23161900_23162000
Isoform_17045_8	chr8	-	176	1	Intergenic	novelGene_1963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	108315594	108315418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_108315400_108315600
Isoform_17047_3	chr13	-	602	1	NIC	ENSMUSG00000071291.11	novel	2300	4	NA	NA	0	-8040	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAAAAAAATCAGAGAC	NA	False	NA	NA	False	ATTAAA	-4	NA	67648622	67648020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_67648000_67648600
Isoform_17048_5	chr13	-	1291	2	Genic_Genomic	ENSMUSG00000058093.14	novel	4835	4	NA	NA	8	-14931	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	67757798	67756478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_67756867_67756895
Isoform_17053_3	chr13	+	177	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTTTTGATTCTA	NA	False	NA	NA	False	NA	NA	NA	69719673	69719850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_69719700_69719800
Isoform_17056_62	chr13	-	681	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	-13	-89	-13	89	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	72603472	72602791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_72602800_72603500
Isoform_17060_4	chr13	+	312	1	FSM	ENSMUSG00000066407.4	ENSMUST00000085163.4	300	1	-12	0	-12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	73465950	73466262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_73466000_73466300
Isoform_17062_12	chr13	-	955	1	NIC	ENSMUSG00000021302.11	novel	4244	4	NA	NA	-3	-3367	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14238006	14237051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_14237100_14238000
Isoform_17064_3	chr13	-	573	1	Antisense	novelGene_ENSMUSG00000021608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAATGAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73664531	73663958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_-_73664000_73664500
Isoform_17074_22661	chr13	+	922	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	-12	28	-12	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	22661	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	7950	False	NA	NA	False	NA	NA	NA	74554515	74555437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_74554500_74555400
Isoform_17082_3	chr13	-	1704	1	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	32	-4628	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	4858	False	NA	NA	False	NA	NA	NA	74765789	74764085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_74764100_74765800
Isoform_17087_3	chr13	+	1951	1	NIC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	1	-5607	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	76328544	76330495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_76328500_76330500
Isoform_17091_18	chr13	+	1275	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAGAATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80849207	80850482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_80849200_80850500
Isoform_17093_4	chr13	+	3130	2	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	80851034	80854186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_80852656_80852677
Isoform_17094_20	chr13	+	3018	2	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	80851148	80854188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_80852656_80852677
Isoform_17098_3	chr19	-	2249	4	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	22702349	22699841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_22700558_22700770_22700901_22700925_22701569_22701589
Isoform_17101_10	chr13	+	1836	1	NIC	ENSMUSG00000074794.11	novel	2784	2	NA	NA	2	-4396	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTTTTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81031530	81033366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_81031500_81033400
Isoform_17102_3	chr13	-	563	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	81792400	81791837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_81791800_81792400
Isoform_17107_3	chr4	+	180	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTAGCACGT	NA	False	NA	NA	False	NA	NA	NA	102883345	102883525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_102883300_102883500
Isoform_17109_4	chr13	+	3715	1	NIC	ENSMUSG00000012422.15	novel	8689	4	NA	NA	-10	-11223	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90237842	90241557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_90237800_90241600
Isoform_17110_3	chr13	+	167	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAATCTTAAG	NA	False	NA	NA	False	NA	NA	NA	90349351	90349518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_90349400_90349500
Isoform_17111_5	chr13	+	171	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91005601	91005772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_91005600_91005800
Isoform_17113_7	chr13	+	190	1	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTAGATAAATGATCG	NA	False	NA	NA	False	NA	NA	NA	91400336	91400526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_91400300_91400500
Isoform_17116_20	chr13	+	196	1	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	6855	False	NA	NA	False	NA	NA	NA	92618028	92618224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_92618000_92618200
Isoform_17117_3	chr13	+	177	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAATCCAGTC	NA	False	NA	NA	False	NA	NA	NA	92741927	92742104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_92741900_92742100
Isoform_17118_3	chr13	+	177	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5601	False	NA	NA	False	NA	NA	NA	92780625	92780802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_92780600_92780800
Isoform_17119_3	chr13	+	3076	1	NIC	ENSMUSG00000007617.19	novel	2468	6	NA	NA	-8	-34743	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATGAATAAAATAAAAAAT	NA	False	NA	NA	False	TTTAAA	-1	NA	93440601	93443677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_93440600_93443700
Isoform_17121_4	chr13	-	1190	1	NIC	ENSMUSG00000021678.10	novel	2741	2	NA	NA	2	-12304	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAACTTAAAAAAAAAGTG	9828	False	NA	NA	False	TTTAAA	-35	NA	95661733	95660543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_95660500_95661700
Isoform_17122_3	chr13	-	2871	2	Genic_Genomic	ENSMUSG00000021676.11	novel	5847	36	NA	NA	-16	-142670	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	96028519	96025627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_96027112_96027132
Isoform_17123_3	chr13	-	916	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	1	1244	1	-1244	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	96217883	96216967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_96217000_96217900
Isoform_17124_13	chr13	-	176	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	96598221	96598045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_96598000_96598200
Isoform_17125_3	chr13	-	854	1	NIC	ENSMUSG00000021668.16	novel	1089	3	NA	NA	-27	-25577	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	96679020	96678166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_96678200_96679000
Isoform_17127_3	chr13	-	187	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATATAAAGGATCAAA	NA	False	NA	NA	False	NA	NA	NA	17903966	17903779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_17903800_17904000
Isoform_17129_10	chr13	+	185	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGTTAATCACA	NA	False	NA	21	True	NA	NA	NA	97150533	97150718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_97150500_97150700
Isoform_17130_4	chr13	-	1434	1	Genic_Genomic	ENSMUSG00000033799.11	novel	NA	NA	NA	NA	-116	-12921	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACACGAATAT	NA	False	NA	NA	False	NA	NA	NA	3661224	3659790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_3659800_3661200
Isoform_17133_3	chr13	-	222	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTTTCCCCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97296456	97296234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_97296200_97296500
Isoform_17135_30	chr13	-	193	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGAGGGATCGACAA	NA	False	NA	NA	False	NA	NA	NA	97661369	97661176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_97661200_97661400
Isoform_17136_9	chr13	-	173	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	97848891	97848718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_97848700_97848900
Isoform_17138_5	chr13	-	536	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	0	25	0	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACCTATGGAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	97897140	97896604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_97896600_97897100
Isoform_17142_3	chr13	-	1379	1	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	50643	0	29926	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	7698	False	NA	-7	True	AATAAA	-15	NA	98976905	98975526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_98975500_98976900
Isoform_17143_6	chr13	-	1902	1	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	36	-48775	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAAAGAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	99062826	99060924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_99060900_99062800
Isoform_17145_27	chr11	-	171	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4857183	4857012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_4857000_4857200
Isoform_17146_4	chr13	+	212	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGTACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99967181	99967393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_99967200_99967400
Isoform_17147_3	chr13	-	3295	1	FSM	ENSMUSG00000075054.6	ENSMUST00000222595.2	2749	1	-15	-531	6	531	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	18167928	18164633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_18164600_18167900
Isoform_17150_22	chr13	+	177	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100868424	100868601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_100868400_100868600
Isoform_17155_4	chr13	-	900	1	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	29	-2778	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTAACAGGTTT	NA	False	NA	NA	False	NA	NA	NA	100912378	100911478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_100911500_100912400
Isoform_17157_3	chr13	-	1427	1	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	97	-6247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAAGATAA	10016	False	NA	NA	False	NA	NA	NA	103911017	103909590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_103909600_103911000
Isoform_17158_4	chr13	-	1378	1	NIC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	14	-4287	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACGAAACAAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	104365316	104363938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_104363900_104365300
Isoform_17159_3	chr13	+	176	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAGAGAGATGTTA	NA	False	NA	NA	False	NA	NA	NA	104486682	104486858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_104486700_104486900
Isoform_17160_84	chr13	-	907	1	FSM	ENSMUSG00000049233.8	ENSMUST00000061241.8	586	1	-38	-283	-38	283	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	107551267	107550360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_107550400_107551300
Isoform_17161_3136	chr13	+	862	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-23	-44	-23	44	mono-exon	FALSE	NA	NA	NA	NA	NA	3136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAAAAAATGCAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	108807113	108807975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_108807100_108808000
Isoform_17174_3	chr13	-	2035	1	ISM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	60523	8	2903	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAACTGGTATTTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	111885004	111882969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_111883000_111885000
Isoform_17175_7	chr13	-	176	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAAAGATT	9705	False	NA	NA	False	NA	NA	NA	112592104	112591928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_112591900_112592100
Isoform_17176_9	chr13	-	1214	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	283	-155	283	155	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATACTATA	NA	False	NA	NA	False	AGTAAA	-11	NA	112731335	112730121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_112730100_112731300
Isoform_17178_13	chr13	-	767	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	730	-155	730	155	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATACTATA	NA	False	NA	NA	False	AGTAAA	-11	NA	112730888	112730121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_112730100_112730900
Isoform_17180_6	chr13	-	1283	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	211	-152	211	152	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAAAAAATACT	NA	False	NA	NA	False	AGTAAA	-8	NA	112731407	112730124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_112730100_112731400
Isoform_17183_3	chr13	+	197	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGGATATCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	112976557	112976754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_112976600_112976800
Isoform_17187_11	chr13	-	4015	1	NIC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	6	-19792	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113755094	113751079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_113751100_113755100
Isoform_17189_27	chr13	+	1995	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATTTTTTCCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	113855065	113857060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_113855100_113857100
Isoform_17190_19	chr13	+	5273	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	113855104	113860377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_113855100_113860400
Isoform_17197_112	chr13	+	1921	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATTTTTTCCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	113855139	113857060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_113855100_113857100
Isoform_17205_283	chr13	+	5207	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855171	113860378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_113855200_113860400
Isoform_17207_3	chr5	-	3999	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	88314430	88310431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_88310400_88314400
Isoform_17215_3	chr9	-	189	1	Intergenic	novelGene_2105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGTTTTGGTA	8628	False	NA	NA	False	NA	NA	NA	109840819	109840630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_109840600_109840800
Isoform_17216_4	chr13	+	1499	1	NIC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	20	-359253	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTACCAAATAAG	NA	False	NA	NA	False	NA	NA	NA	113931060	113932559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_113931100_113932600
Isoform_17218_7	chr13	-	979	1	NIC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	0	-26334	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114524616	114523637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_114523600_114524600
Isoform_17219_5	chr13	+	175	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	20217548	20217723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_20217500_20217700
Isoform_17220_109	chr13	+	759	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	1333	44	1333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	117365894	117366653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_117365900_117366700
Isoform_17221_8	chr13	+	428	1	FSM	ENSMUSG00000062822.9	ENSMUST00000225292.2	1563	1	-8	1143	0	-1143	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACGAGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	119599303	119599731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_119599300_119599700
Isoform_17223_4	chr13	+	206	1	Genic_Genomic	ENSMUSG00000060404.4	novel	NA	NA	NA	NA	3257	61	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	7600	False	NA	NA	False	NA	NA	NA	21303120	21303326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_+_21303100_21303300
Isoform_17227_8	chr13	-	760	1	ISM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	10656	65	10656	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTAAAGATTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	21627174	21626414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_-_21626400_21627200
Isoform_17228_36	chr13	+	1913	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	1	10	1	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTAGAA	NA	False	NA	NA	False	TTTAAA	-17	NA	21679393	21681306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21679400_21681300
Isoform_17229_354	chr13	-	485	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	-16	-79	-16	79	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	21685604	21685119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21685100_21685600
Isoform_17231_3	chr13	+	194	1	FSM	ENSMUSG00000114003.2	ENSMUST00000221154.2	781	1	-12	599	-12	-599	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATTTGCATGCAGCG	NA	False	NA	NA	False	NA	NA	NA	3348874	3349068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_3348900_3349100
Isoform_17232_6	chr13	+	248	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-25	170	-25	-170	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACGCGCATCATCCCG	3374	False	NA	NA	False	NA	NA	NA	21900566	21900814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21900600_21900800
Isoform_17234_7	chr13	-	805	1	FSM	ENSMUSG00000080076.5	ENSMUST00000091710.6	352	1	-44	-409	-44	409	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21906022	21905217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21905200_21906000
Isoform_17235_4	chr13	+	448	2	Fusion	ENSMUSG00000114279.2_ENSMUSG00000069308.8	novel	621	2	NA	NA	32	-36	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACATTCTCAAAACAGAGA	9053	False	NA	NA	False	NA	NA	NA	21906245	21972110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr13_+_21906400_21971816
Isoform_17237_4	chr13	-	419	1	FSM	ENSMUSG00000063021.4	ENSMUST00000074752.4	393	1	-33	7	-33	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAGGCCCTTGATAGA	NA	False	NA	NA	False	NA	NA	NA	21938030	21937611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21937600_21938000
Isoform_17238_7	chr13	-	765	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAAAGGCTCTTTTC	NA	False	NA	NA	False	AAAAAG	-27	NA	21964797	21964032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21964000_21964800
Isoform_17239_88	chr13	-	732	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	0	11	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTAGGTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	21964795	21964063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21964100_21964800
Isoform_1724_1281	chr10	-	2774	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	47	4	47	-4	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGCTTATTTTC	NA	False	NA	-44	True	AATAAA	-12	NA	86541326	86526707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
Isoform_17242_4	chr13	-	489	1	FSM	ENSMUSG00000101972.2	ENSMUST00000189457.2	411	1	-33	-45	-33	45	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCACCAAAAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	21967573	21967084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21967100_21967600
Isoform_17243_5	chr13	-	446	1	FSM	ENSMUSG00000069309.3	ENSMUST00000091751.3	393	1	-30	-23	-30	23	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAGGCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	21971418	21970972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_21971000_21971400
Isoform_17244_4	chr13	+	456	1	NIC	ENSMUSG00000069303.8	novel	1256	2	NA	NA	3	-2464	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAGCGTAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	22017915	22018371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_22017900_22018400
Isoform_17246_8230	chr13	-	445	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	2	35	2	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	8230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	22017675	22017230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_22017200_22017700
Isoform_17251_4	chr13	-	404	1	FSM	ENSMUSG00000069305.4	ENSMUST00000102979.2	430	1	0	26	0	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATCCTCCAAAGGGTTG	NA	False	NA	NA	False	ACTAAA	-22	NA	22016366	22015962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_22016000_22016400
Isoform_17253_8121	chr13	+	447	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	-30	63	-30	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	8121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	21994604	21995051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_21994600_21995100
Isoform_17257_6	chr13	-	458	1	Genic_Genomic	ENSMUSG00000069307.8	novel	NA	NA	NA	NA	-2	-2465	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTCAGCGTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	21994369	21993911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_21993900_21994400
Isoform_17258_4	chr13	-	1100	1	FSM	ENSMUSG00000069302.6	ENSMUST00000091742.6	405	1	-28	-667	-28	667	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATATGTGTGCTCTGCA	NA	False	NA	NA	False	AATAAA	-19	NA	22219766	22218666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_22218700_22219800
Isoform_17259_11	chr13	+	481	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	-31	26	-31	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACCAGTATTAGAGCTG	NA	False	NA	13	True	NA	NA	NA	22220008	22220489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_22220000_22220500
Isoform_1726_37	chr10	-	2873	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	-52	4	-52	-4	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGCTTATTTTC	NA	False	NA	-44	True	AATAAA	-12	NA	86541425	86526707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
Isoform_17260_11	chr13	-	486	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	-19	18	-19	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCCTAACAAGGGCTT	NA	False	NA	1	True	NA	NA	NA	22227133	22226647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_22226600_22227100
Isoform_17261_13	chr13	+	458	1	FSM	ENSMUSG00000069300.4	ENSMUST00000110452.2	463	1	-13	18	-13	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTTTAAAGAGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	22227370	22227828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_22227400_22227800
Isoform_17262_3	chr13	-	872	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	5911195	5910323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_5910300_5911200
Isoform_17264_3	chr13	+	423	1	FSM	ENSMUSG00000061991.3	ENSMUST00000073261.3	399	1	-31	7	-31	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGCCAGTGAGCTAAG	7386	False	NA	NA	False	NA	NA	NA	23718044	23718467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23718000_23718500
Isoform_17265_4	chr13	+	492	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	-4	42	-4	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCCAAAAAAAGAACTGT	8929	False	NA	NA	False	TTTAAA	-22	NA	23719587	23720079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23719600_23720100
Isoform_17266_11	chr13	+	179	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTAGGGC	NA	False	NA	NA	False	NA	NA	NA	23724220	23724399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_23724200_23724400
Isoform_17267_23	chr13	+	499	1	FSM	ENSMUSG00000052565.8	ENSMUST00000045301.9	7425	1	1774	5152	1774	-5152	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACGGCCAAGAAGACT	15	False	NA	NA	False	NA	NA	NA	23739209	23739708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23739200_23739700
Isoform_17268_8	chr13	-	489	1	FSM	ENSMUSG00000069273.3	ENSMUST00000105107.2	836	1	-17	364	-17	-364	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATCCACCAAAGATGCT	1	True	NA	NA	False	NA	NA	NA	23746560	23746071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23746100_23746600
Isoform_17270_14	chr13	-	525	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	61	118	61	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTTAAGTGGATTTAG	8875	False	NA	NA	False	AGTAAA	-15	NA	23755333	23754808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23754800_23755300
Isoform_17272_6	chr13	+	476	1	FSM	ENSMUSG00000058385.9	ENSMUST00000079251.8	618	1	-8	150	-8	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCACTTTAAGTGCTT	3215	False	NA	NA	False	NA	NA	NA	23755561	23756037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23755600_23756000
Isoform_17274_3	chr13	+	1250	1	FSM	ENSMUSG00000099583.3	ENSMUST00000105105.4	1249	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAAAGAAAGA	2947	False	NA	NA	False	NA	NA	NA	23759936	23761186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23759900_23761200
Isoform_17275_125	chr13	+	373	1	FSM	ENSMUSG00000061482.8	ENSMUST00000102968.3	1138	1	-30	795	-30	-795	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAGGCCCTTTTCA	1883	False	NA	-24	True	NA	NA	NA	23765550	23765923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23765600_23765900
Isoform_17276_77	chr13	-	707	1	FSM	ENSMUSG00000051627.4	ENSMUST00000062045.4	1930	1	3	1220	3	-1220	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGTAAATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	23806538	23805831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23805800_23806500
Isoform_17279_4	chr13	+	466	1	NIC	ENSMUSG00000018102.6	novel	1156	2	NA	NA	3	-8241	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTCAAAGAGAGAGCTG	186	False	NA	NA	False	NA	NA	NA	23868184	23868650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_23868200_23868600
Isoform_17280_11	chr13	-	351	1	FSM	ENSMUSG00000060678.6	ENSMUST00000102967.3	820	1	-4	473	-4	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCCTTTTCAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	23882441	23882090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23882100_23882400
Isoform_17283_12	chr13	+	702	1	FSM	ENSMUSG00000036181.3	ENSMUST00000040914.3	1560	1	-1	859	-1	-859	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCTTTTCAGAGCCA	NA	False	NA	NA	False	AAAAAG	-25	NA	23922789	23923491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23922800_23923500
Isoform_17284_4	chr13	+	1557	1	FSM	ENSMUSG00000036181.3	ENSMUST00000040914.3	1560	1	-1	4	-1	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTGGACTCTTTCA	NA	False	NA	12	True	AATAAA	-17	NA	23922789	23924346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23922800_23924300
Isoform_17285_4	chr13	-	480	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	81	69	81	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTCATGTAAAGTTGCT	4713	False	NA	-2	True	AAAAAG	-21	NA	23929504	23929024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_23929000_23929500
Isoform_17286_37	chr13	+	487	1	FSM	ENSMUSG00000061615.3	ENSMUST00000078369.3	473	1	-48	34	-48	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGGCTCTTTTCAGA	352	False	NA	NA	False	NA	NA	NA	23935060	23935547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23935100_23935500
Isoform_17289_6	chr13	+	746	1	FSM	ENSMUSG00000049539.4	ENSMUST00000055770.4	741	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAACTCAAAGAGCCTGA	NA	False	NA	NA	False	TATAAA	-30	NA	23947648	23948394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_23947600_23948400
Isoform_17290_4	chr13	+	445	1	FSM	ENSMUSG00000060081.2	ENSMUST00000072391.2	390	1	-25	-30	-25	30	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAAGGCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	24118419	24118864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_24118400_24118900
Isoform_17291_3	chr17	-	180	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26804819	26804639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_26804600_26804800
Isoform_17297_4	chr13	+	321	1	FSM	ENSMUSG00000060198.8	ENSMUST00000180940.2	627	1	129	177	129	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAAAGAATGCCAA	NA	False	NA	NA	False	AAGAAA	-19	NA	26676665	26676986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_26676700_26677000
Isoform_17298_14	chr13	+	540	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	67	0	67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAAAAATTTAGTAATA	NA	False	NA	-4	True	AATAAA	-15	NA	28441577	28442117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_28441600_28442100
Isoform_17303_8	chr13	-	204	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGCTAGAATATCACC	NA	False	NA	NA	False	NA	NA	NA	28566990	28566786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_28566800_28567000
Isoform_17304_5	chr13	-	2953	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	16	1826	16	-1826	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAGAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29137680	29134727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_29134700_29137700
Isoform_17314_4	chr13	+	173	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	30046170	30046343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_30046200_30046300
Isoform_17318_15	chr13	-	1166	1	FSM	ENSMUSG00000076430.2	ENSMUST00000102943.2	1187	1	27	-6	27	6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTATTGTATTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	31131715	31130549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_31130500_31131700
Isoform_17319_6	chr13	-	2385	1	FSM	ENSMUSG00000090863.2	ENSMUST00000170573.2	3200	1	-691	1506	-691	-1506	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTTTTGGTTGA	NA	False	NA	NA	False	AGTAAA	-19	NA	31744007	31741622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_31741600_31744000
Isoform_17321_3	chr13	-	2154	1	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	2	-14143	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATTTGGTG	NA	False	NA	NA	False	NA	NA	NA	34186767	34184613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_34184600_34186800
Isoform_17329_6	chr13	-	234	1	FSM	ENSMUSG00000068324.6	ENSMUST00000089635.6	330	1	-80	176	-80	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAACAATACAGTG	NA	False	NA	NA	False	NA	NA	NA	6713010	6712776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_6712800_6713000
Isoform_17330_17	chr13	-	177	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGATTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	65802343	65802166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_65802200_65802300
Isoform_17336_3	chr13	+	599	1	NIC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	321	-25814	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41403640	41404239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_41403600_41404200
Isoform_17338_18	chr13	+	186	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	44539348	44539534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_44539300_44539500
Isoform_17339_7	chr1	-	189	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAATTCC	NA	False	NA	NA	False	NA	NA	NA	87770353	87770164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_87770200_87770400
Isoform_17340_4	chr13	-	2108	1	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44883939	44881831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_-_44881800_44883900
Isoform_17341_7	chr13	-	228	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGACTGAGAAGAAATTT	NA	False	NA	NA	False	AAGAAA	-32	NA	44917502	44917274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_44917300_44917500
Isoform_17349_23	chr13	-	2274	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTGGAAACGTGTCTT	NA	False	NA	-1	True	AATAAA	-18	NA	47168306	47166032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_47166000_47168300
Isoform_17351_3	chr13	-	2283	1	NIC	ENSMUSG00000050954.16	novel	4175	4	NA	NA	7	-16639	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	48666920	48664637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_48664600_48666900
Isoform_17352_4	chr13	-	2481	1	FSM	ENSMUSG00000103373.2	ENSMUST00000195552.2	2390	1	-1472	1381	-1472	-1381	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATTAAAAAAAAGAAG	NA	False	NA	NA	False	AATACA	-1	NA	48699981	48697500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_48697500_48700000
Isoform_17354_7	chr13	-	165	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATATTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48718345	48718180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_48718200_48718300
Isoform_17355_3	chr13	-	179	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTCTTTTAT	7806	False	NA	NA	False	NA	NA	NA	49176165	49175986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_49176000_49176200
Isoform_17356_4	chr13	+	1007	1	ISM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	79461	2	5082	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTTAAAGATTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	9223478	9224485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_9223500_9224500
Isoform_17358_3	chr13	+	181	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	9303898	9304079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_9303900_9304100
Isoform_17359_7	chr13	-	2986	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51254766	51251780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_51251800_51254800
Isoform_17360_3	chr13	-	3043	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51254823	51251780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_51251800_51254800
Isoform_17363_6	chr13	+	2673	2	NNC	ENSMUSG00000048264.17	novel	4801	36	NA	NA	-2	-386960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9326561	9329254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr13_+_9327323_9327342
Isoform_17365_54	chr13	+	2255	1	NIC	ENSMUSG00000062248.6	novel	692	3	NA	NA	93	-3081	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51799360	51801615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_51799400_51801600
Isoform_17367_3	chr13	-	4109	1	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	41	-150015	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGGAAGGAAATAATTACA	NA	False	NA	NA	False	AAAAAG	-4	NA	53440119	53436010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_53436000_53440100
Isoform_17368_4	chr13	-	235	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54627118	54626883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_54626900_54627100
Isoform_17369_4	chr13	-	174	1	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	54808354	54808180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_54808200_54808400
Isoform_17372_15	chr13	+	2753	1	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	1	-2932	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54937276	54940029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_54937300_54940000
Isoform_17373_3	chr13	+	176	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACGAAAAAACAA	5180	False	NA	NA	False	NA	NA	NA	55218260	55218436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_55218300_55218400
Isoform_17375_3	chr13	+	211	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAGAAG	609	False	NA	NA	False	AATAAA	-3	NA	55414196	55414407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_55414200_55414400
Isoform_17376_3	chr8	+	178	1	Intergenic	novelGene_1989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124700682	124700860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_124700700_124700900
Isoform_17377_3	chr13	+	2304	1	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	106240	0	25054	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55463834	55466138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr13_+_55463800_55466100
Isoform_17379_4	chr13	-	2085	1	Genic_Genomic	ENSMUSG00000034789.9	novel	NA	NA	NA	NA	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	6423	False	NA	-17	True	AATAAA	-19	NA	55469777	55467692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_55467700_55469800
Isoform_17383_4	chr13	-	177	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	4161	False	NA	NA	False	NA	NA	NA	55566959	55566782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_55566800_55567000
Isoform_17385_4	chr13	+	1043	1	FSM	ENSMUSG00000058569.9	ENSMUST00000225723.2	2206	1	4	1159	4	93	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAAAAAAATACT	NA	False	NA	NA	False	NA	NA	NA	55740974	55742017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_+_55741000_55742000
Isoform_17386_4	chr13	-	242	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8912	False	NA	NA	False	NA	NA	NA	55775594	55775352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_55775400_55775600
Isoform_17387_3	chr13	+	474	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	55838027	55838501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_55838000_55838500
Isoform_17388_6	chr13	+	189	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCAGGGGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	55838669	55838858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_55838700_55838900
Isoform_17389_22	chr13	+	832	1	NIC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	5	-9540	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	ACTAAA	-41	NA	55840941	55841773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55840900_55841800
Isoform_17391_3	chr5	-	176	1	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAT	4606	False	NA	NA	False	NA	NA	NA	108656196	108656020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_108656000_108656200
Isoform_17392_6	chr13	+	1324	1	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	68	-5085	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55862530	55863854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_55862500_55863900
Isoform_17393_7	chr13	+	184	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1331	False	NA	NA	False	NA	NA	NA	55906630	55906814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_55906600_55906800
Isoform_17394_3	chr14	-	174	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9527	False	NA	NA	False	NA	NA	NA	61361383	61361209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_61361200_61361400
Isoform_17395_8	chr13	-	924	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1754	0	1754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATTGAGTGAGAGTATG	1085	False	NA	-5	True	AATAAA	-15	NA	58274616	58273692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58273700_58274600
Isoform_17396_3	chr13	-	1190	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1490	-2	1490	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGAGTGAGAGTATGTA	821	False	NA	-3	True	AATAAA	-17	NA	58274880	58273690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_58273700_58274900
Isoform_17399_15	chr13	-	178	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTTGT	NA	False	NA	NA	False	NA	NA	NA	58415676	58415498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_58415500_58415700
Isoform_174_4	SIRV10002	+	2340	1	FSM	SIRV10002A	SIRV10002	10001	1	7661	0	7661	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	7661	10001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10002_+_7700_10000
Isoform_17401_4	chr7	+	283	1	Intergenic	novelGene_1830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTGGATTCACTAAAGA	NA	False	NA	24	True	AATAAA	-24	NA	83406728	83407011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_83406700_83407000
Isoform_17402_3	chr13	+	388	1	Antisense	novelGene_ENSMUSG00000021546.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGCAGGAC	NA	False	NA	NA	False	TTTAAA	-13	NA	58539770	58540158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_+_58539800_58540200
Isoform_17403_3	chr13	+	4099	1	NIC	ENSMUSG00000035367.10	novel	3855	3	NA	NA	-101	-359	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	58550412	58554511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_58550400_58554500
Isoform_17404_3	chr13	+	3104	1	NIC	ENSMUSG00000035367.10	novel	3855	3	NA	NA	-65	-1318	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTAGAGCTGGGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	58550448	58553552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_58550400_58553600
Isoform_17405_9	chr13	+	954	1	NIC	ENSMUSG00000021555.16	novel	374	5	NA	NA	9	-13434	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	1318	False	NA	NA	False	NA	NA	NA	59733216	59734170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_59733200_59734200
Isoform_17406_4	chr13	-	3043	1	FSM	ENSMUSG00000044792.8	ENSMUST00000224636.2	4060	1	-57	1074	0	-1074	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	59917624	59914581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_59914600_59917600
Isoform_17407_3	chr13	+	2050	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAACCAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59977102	59979152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_59977100_59979200
Isoform_17408_5	chr13	-	3151	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	-195	5	-195	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTATGGTGCAGTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	60325374	60322223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_60322200_60325400
Isoform_17411_8	chr13	-	2416	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	169	376	169	-376	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATTGTTGTATCTCCC	NA	False	NA	NA	False	ATTAAA	-13	NA	60325010	60322594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_60322600_60325000
Isoform_17412_16	chr13	-	2694	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	-152	419	-152	-419	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTATTTTTAAAAA	NA	False	NA	NA	False	TATAAA	-15	NA	60325331	60322637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr13_-_60322600_60325300
Isoform_17417_4	chr13	-	2703	1	Genic_Genomic	ENSMUSG00000097715.3	novel	NA	NA	NA	NA	-29	-26566	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12665306	12662603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_12662600_12665300
Isoform_17418_5	chr7	-	167	1	Intergenic	novelGene_1845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101944016	101943849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_101943800_101944000
Isoform_17420_3	chr13	-	2176	1	Genic_Genomic	ENSMUSG00000074865.12_ENSMUSG00000055228.9	novel	NA	NA	NA	NA	-2	-4219	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	62706451	62704275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr13_-_62704300_62706500
Isoform_17421_3	chr13	+	173	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62723342	62723515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_62723300_62723500
Isoform_17423_3	chr13	+	263	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAATCAATCA	NA	False	NA	NA	False	AATAAA	-8	NA	62823971	62824234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_62824000_62824200
Isoform_17424_3	chr13	-	2362	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	63710914	63708552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_63708600_63710900
Isoform_17425_3	chr13	-	580	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAAAAATAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	64116541	64115961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_64116000_64116500
Isoform_17426_22	chr13	-	1902	1	NIC	ENSMUSG00000044934.14	novel	3532	5	NA	NA	2	-10831	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTGTC	6052	False	NA	NA	False	NA	NA	NA	64301014	64299112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_64299100_64301000
Isoform_17427_11	chr13	+	2198	1	NIC	ENSMUSG00000021476.10	novel	4903	7	NA	NA	10	458	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGGGTTTTATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	64309692	64311890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_+_64309700_64311900
Isoform_17428_7	chr13	-	179	1	Antisense	novelGene_ENSMUSG00000113816.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGCAACAAGG	NA	False	NA	NA	False	NA	NA	NA	64444770	64444591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr13_-_64444600_64444800
Isoform_17429_8	chr10	+	198	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTTAA	NA	False	NA	NA	False	NA	NA	NA	34097786	34097984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_34097800_34098000
Isoform_17433_3	chr13	-	2628	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	-9	-25814	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13568158	13565530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr13_-_13565500_13568200
Isoform_17434_3	chr13	+	180	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATTTTAAAGGTACT	NA	False	NA	NA	False	NA	NA	NA	65521806	65521986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_65521800_65522000
Isoform_17435_3	chrX	-	177	1	Intergenic	novelGene_2191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	121944371	121944194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_121944200_121944400
Isoform_17436_25	chr14	-	907	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	126	3565	-2	1	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCATGGGAACTCTTC	NA	False	NA	-38	True	AATAAA	-15	NA	4198434	4189257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
Isoform_17437_21	chr14	-	1004	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	29	3565	-21	1	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCATGGGAACTCTTC	NA	False	NA	-38	True	AATAAA	-15	NA	4198531	4189257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
Isoform_17438_7	chr14	-	2482	16	ISM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-1	28622	-1	-9869	5prime_fragment	TRUE	canonical	3	144	junction_11	21.8780458196999	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTATATTGTGAATAAAA	3842	False	NA	NA	False	NA	NA	NA	6104585	6062922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
Isoform_17442_6	chr14	-	2745	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	9	181	9	-181	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTCTTGTATGAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	6220474	6158017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_17443_29	chr14	-	2499	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	45	391	-2	3	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTCAGTGCTTAC	NA	False	NA	-3	True	AATAAA	-18	NA	6220438	6158227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_17444_20	chr14	-	2536	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	10	389	10	5	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCAGTGCTTACCT	NA	False	NA	-1	True	AATAAA	-20	NA	6220473	6158225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
Isoform_17445_52	chr14	-	3236	22	ISM	ENSMUSG00000021733.12	ENSMUST00000226079.3	3594	24	-12	9925	-1	-17	5prime_fragment	TRUE	canonical	3	66	junction_16	12.0328348964929	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAGATGACAAA	NA	False	NA	NA	False	NA	NA	NA	7766696	7683377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
Isoform_17447_10	chr14	-	3206	22	ISM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-21	9925	-7	-17	5prime_fragment	FALSE	canonical	0	0	junction_16	22.9243060859824	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAGATGACAAA	NA	False	NA	NA	False	NA	NA	NA	7766705	7683377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
Isoform_17449_5	chr14	-	1696	12	NNC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	8.96273275917545	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8123351	8114269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574_8122970_8123250
Isoform_17450_6	chr14	-	1320	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	9.8974744253269	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8123370	8114269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8123250
Isoform_17452_3	chr14	-	1176	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	21	1247	-7	0	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGAGTCTCCAGTT	NA	False	NA	-3	True	AATAAA	-23	NA	10185488	10167778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
Isoform_17453_10	chr14	-	1210	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	-11	-8	-1	2	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGTCTCCAGTTCCT	NA	False	NA	0	True	AATAAA	-26	NA	10185516	10167775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
Isoform_17455_5	chr14	-	1144	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	62	1246	0	0	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTGAGTCTCCAGTTC	NA	False	NA	-2	True	AATAAA	-24	NA	10185528	10167777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
Isoform_17456_5	chr14	-	2298	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	54	100	0	8	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGCTTTGTGTTTTCTT	NA	False	NA	0	True	AATACA	-27	NA	10185536	10166631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
Isoform_17457_156	chr14	-	1638	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	11	1	11	-1	multi-exon	FALSE	canonical	3	225	junction_1	7.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGGTTGTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	14255622	14246210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_17458_11	chr14	-	1763	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-110	-3	-110	3	multi-exon	FALSE	canonical	3	225	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTGTATTTATTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	14255743	14246206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_17462_5	chr14	-	2502	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	8	-860	8	860	multi-exon	FALSE	canonical	3	225	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGACTCTAATTAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	14255625	14245349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14247587_14249552_14249623_14255430
Isoform_17463_45	chr14	-	2789	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	18	5	6	1	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTGTAGCTTTGCT	NA	False	NA	-5	True	AATAAA	-12	NA	14371544	14304660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_17466_42	chr14	-	2798	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-32	-1	0	1	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTGTAGCTTTGCT	NA	False	NA	-5	True	AATAAA	-12	NA	14371550	14304660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_17470_4	chr14	-	2161	11	FSM	ENSMUSG00000033885.16	ENSMUST00000225616.2	2121	11	-44	4	-3	-4	multi-exon	FALSE	canonical	3	88	junction_3	16.2283702200806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	14371565	14324109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
Isoform_17472_17	chr14	-	2440	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-30	-9	-30	9	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATACCTTTATGTGTGT	NA	False	NA	-6	True	NA	NA	NA	14389436	14377929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_17475_27	chr14	-	1187	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-40	1254	-40	26	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGTGCTCTTATTAT	NA	False	NA	-4	True	AATACA	-21	NA	14389446	14379192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
Isoform_17481_3	chr14	-	2463	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	155	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	87.8621647809795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATATACCTTTA	NA	False	NA	-13	True	NA	NA	NA	14389251	14377936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389045
Isoform_17483_10	chr14	-	1486	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	12	728	-5	-630	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCTTCCGATGTATC	NA	False	NA	3	True	ATTAAA	-21	NA	14466859	14413737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
Isoform_17484_6	chr14	-	2225	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	7	-6	7	6	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACACCCAGGTACTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	14466864	14413003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
Isoform_17487_6	chr14	-	2957	12	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	45046	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.488255678778	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14539986	14518187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_14518407_14518436_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810
Isoform_17489_5	chr14	-	3296	13	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	109437	7	42653	-7	3prime_fragment	FALSE	canonical	3	510	junction_11	42.6363010434379	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAACGCTCCCTGTCAT	NA	False	NA	NA	False	AATAAA	-10	NA	14542379	14518191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253
Isoform_17490_4	chr14	-	3434	14	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	108470	2	41686	-2	3prime_fragment	TRUE	canonical	3	510	junction_11	42.3784024484506	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTCCCTGTCATTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	14543346	14518186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261
Isoform_17491_4	chr14	-	1969	6	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	56908	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	313.060760875585	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTCCCTGTCATTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	14528124	14518186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_14518407_14518436_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14528007
Isoform_17492_6	chr14	-	2976	19	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	55	49614	55	14432	5prime_fragment	FALSE	canonical	3	255	junction_13	34.4774035858951	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAATTAATGGACTG	NA	False	NA	NA	False	NA	NA	NA	14651761	14567798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_17493_3	chr14	-	3409	18	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	28	54536	28	9510	5prime_fragment	FALSE	canonical	3	255	junction_12	33.849964094577	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACCTTTTCTGTACA	NA	False	NA	NA	False	AATAAA	-7	NA	14651788	14572720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_17494_4	chr14	-	1258	6	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	56	69169	56	-5123	5prime_fragment	FALSE	canonical	3	266	junction_5	23.3272372989173	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	14651760	14587353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_17495_9	chr14	-	1486	4	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	55	77537	55	-13491	5prime_fragment	FALSE	canonical	3	266	junction_3	27.0678160675491	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	14651761	14595721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_14596429_14599895_14599994_14601987_14602237_14651329
Isoform_17496_4	chr14	-	2090	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCAGTGTATGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	17614202	17592869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
Isoform_175_6	SIRV10002	+	2219	1	FSM	SIRV10002A	SIRV10002	10001	1	7782	0	7782	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	7782	10001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10002_+_7800_10000
Isoform_17500_1611	chr14	-	960	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	33	569	33	-569	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	1611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTTGTTTGTTTTGCT	1721	False	NA	-27	True	AATAAA	-13	NA	19873859	19861987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
Isoform_17504_8	chr14	-	3601	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	225	0	35	0	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	-4	True	AATAAA	-18	NA	20027092	19922626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_17505_26	chr14	-	692	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	231	2903	41	193	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCTGGTAATGAGAAT	NA	False	NA	-13	True	AATAAA	-35	NA	20027086	19925529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_17506_30	chr14	-	643	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	271	2912	81	184	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGACATTCTGGT	NA	False	NA	-22	True	AATAAA	-26	NA	20027046	19925538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
Isoform_17507_4	chr14	-	695	3	FSM	ENSMUSG00000043004.14	ENSMUST00000159028.8	458	3	5	-242	5	201	multi-exon	FALSE	canonical	3	12	junction_2	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATGAGAATTGTCTTTC	NA	False	NA	-5	True	AATAAA	-43	NA	20027122	19925521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_19926004_19941353_19941470_20027025
Isoform_17509_52	chr14	-	756	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	65	1494	65	330	multi-exon	FALSE	canonical	3	53	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGAGGCTGGTTTGT	5370	False	NA	NA	False	TATAAA	-8	NA	20133186	20127197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20127713_20132945
Isoform_17510_38	chr14	-	3414	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	-22	0	-22	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231899	20190124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
Isoform_17511_216	chr14	-	3365	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	27	0	27	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231850	20190124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
Isoform_17516_25	chr14	-	2780	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	315	-14	-315	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGACTGGGTCTGACTGA	NA	False	NA	84	True	ATTAAA	-11	NA	20398152	20370234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
Isoform_1752_3	chr10	-	2753	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	21	-609	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	22.0262803213204	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATCCCCATTTTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	87982774	87927902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
Isoform_17522_160	chr14	-	2674	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	58	400	3	-400	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGTCTGTGACATTC	NA	False	NA	-1	True	AATAGA	-16	NA	20398131	20370319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
Isoform_1753_17	chr10	-	3230	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982795	87927293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_17531_283	chr14	-	1366	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	41	224	7	-224	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGGTGGATTATTTA	NA	False	NA	-18	True	AATAAA	-13	NA	20438937	20434929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
Isoform_17535_18	chr14	-	1437	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	-30	224	-30	-224	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGGTGGATTATTTA	NA	False	NA	-18	True	AATAAA	-13	NA	20439008	20434929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
Isoform_1754_17	chr10	-	2602	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	16	-612	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	10.555093557141	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAAAATCCCCATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	87982779	87927905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_17540_33	chr14	-	805	3	FSM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	5	-9	5	9	multi-exon	TRUE	canonical	3	91	junction_2	790	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCATAGCCTGAGCAG	8683	False	NA	-27	True	AATAAA	-23	NA	20443546	20441285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20441529_20441960_20442222_20443245
Isoform_17541_345	chr14	-	538	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	112	1922	-39	1	multi-exon	FALSE	canonical	3	1591	junction_2	40	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTCCTCTGGCATAGC	8639	False	NA	-35	True	AATAAA	-15	NA	20443590	20441293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_17542_257	chr14	-	632	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	21	1919	21	4	multi-exon	FALSE	canonical	3	1591	junction_2	40	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCCTCTGGCATAGCCTG	8548	False	NA	-32	True	AATAAA	-18	NA	20443681	20441290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_17543_10	chr14	-	728	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	-78	1922	-78	1	multi-exon	FALSE	canonical	3	1591	junction_2	40	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTCCTCTGGCATAGC	8449	False	NA	-35	True	AATAAA	-15	NA	20443780	20441293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20441529_20441960_20442222_20443548
Isoform_17547_7	chr14	-	2677	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	42	8	39	1	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACAGCTCTTTTGAC	8242	False	NA	-9	True	AATAAA	-16	NA	20529937	20505352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_17548_36	chr14	-	1799	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	36	892	33	360	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8236	False	NA	-19	True	AATAAA	-18	NA	20529943	20506236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_17549_17	chr14	-	1827	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8	892	5	360	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8208	False	NA	-19	True	AATAAA	-18	NA	20529971	20506236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_1755_3	chr10	-	3157	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	1	-20	intron_retention	FALSE	canonical	3	15	junction_2	20.7605394920267	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAATACAAAGTTTA	NA	False	NA	-31	True	NA	NA	NA	87982739	87927313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_17550_6	chr14	-	2727	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8200	False	NA	-1	True	AATAAA	-24	NA	20529979	20505344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
Isoform_17551_100	chr14	-	2632	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	194	25	2	1	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACAGCTCTTTTGAC	8172	False	NA	-9	True	AATAAA	-16	NA	20530007	20505352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_17553_274	chr14	-	1748	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	194	909	2	360	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8172	False	NA	-19	True	AATAAA	-18	NA	20530007	20506236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_17554_28	chr14	-	1914	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	28	909	16	360	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8006	False	NA	-19	True	AATAAA	-18	NA	20530173	20506236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
Isoform_17558_3	chr14	-	3144	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-10	164	-10	-2	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTCTGTGTTGGGTTTT	NA	False	NA	-3	True	AATAAA	-23	NA	20596625	20550099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_17559_6	chr14	-	3154	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	9	668	9	-2	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTCTGTGTTGGGTTTT	NA	False	NA	-3	True	AATAAA	-23	NA	20596632	20550099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_1756_3	chr10	-	2573	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-8	-613	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	20.7605394920267	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAAAAATCCCCATTT	NA	False	NA	-6	True	AATAAA	-17	NA	87982748	87927906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
Isoform_17561_7	chr14	-	2440	12	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-8	7797	-8	6	5prime_fragment	FALSE	canonical	3	105	junction_2	32.0745515869534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGGCTCGTTGAATAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596623	20557732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_17563_8	chr14	-	2432	12	FSM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	-115	5	-8	-5	multi-exon	FALSE	canonical	3	102	junction_2	32.8535442821749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTCCTGTAATCTGGC	NA	False	NA	-12	True	AATAAA	-14	NA	20596623	20557743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
Isoform_17564_3	chr14	-	6464	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	108	8	108	-8	multi-exon	TRUE	canonical	3	44	junction_20	12.721929885045	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTAATCTCTTGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	20691023	20598987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
Isoform_17565_3	chr14	-	3606	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	224	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	18.1518537873785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTCTGCTTCATT	9647	False	NA	-3	True	AATAAA	-13	NA	20784406	20773799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778255_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_17566_64	chr14	-	3689	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	218	0	218	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9641	False	NA	-1	True	AATAAA	-15	NA	20784412	20773797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_17567_3	chr14	-	3870	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	37	0	37	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9460	False	NA	-1	True	AATAAA	-15	NA	20784593	20773797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_17568_4	chr14	-	3647	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	223	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	16.2331545339299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9646	False	NA	-1	True	AATAAA	-15	NA	20784407	20773797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
Isoform_17569_8	chr14	-	1909	20	NIC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	20844122	20786714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_1757_3	chr10	-	2796	7	FSM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	10	1	10	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.21335164821342	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTCTCGGTTGCAT	NA	False	NA	NA	False	AATAAA	-17	NA	88192927	88158666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_88160648_88161195_88161289_88164944_88165004_88172672_88172851_88176381_88176525_88180505_88180574_88192653
Isoform_17570_7	chr14	-	1859	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	-19	1764	0	1	multi-exon	FALSE	canonical	2	6	junction_6	9.18507762457831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	20844117	20786714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_17571_11	chr14	-	1792	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	0	1772	0	1	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	20844119	20786714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_17572_3	chr14	-	3582	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	-23	5	14	3	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCATTGTGTTATTGCT	NA	False	NA	-5	True	AATAAA	-13	NA	20844142	20784947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
Isoform_17574_70	chr14	-	2188	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	233	4311	5	261	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGCCATTCTCATG	NA	False	NA	1	True	ATTAAA	-24	NA	21102285	21085820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_17575_35	chr14	-	3129	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	236	3367	8	1205	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTTTAAAGTTTGAT	NA	False	NA	-10	True	AATAAA	-15	NA	21102282	21084876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_17576_42	chr14	-	3097	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	262	3373	-1	1199	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102256	21084882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_17578_8	chr14	-	3375	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	-10	3367	3	1205	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTTTAAAGTTTGAT	NA	False	NA	-10	True	AATAAA	-15	NA	21102528	21084876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
Isoform_1758_7	chr10	-	793	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	36	23	0	-23	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATTAAAAAA	4205	False	NA	NA	False	NA	NA	NA	88339751	88322926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
Isoform_17581_9	chr14	-	2151	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	13	261	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGCCATTCTCATG	NA	False	NA	1	True	ATTAAA	-24	NA	21102563	21085820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
Isoform_17583_283	chr14	-	918	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1326	-13	-2	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTCTGAGCATCCTCTT	NA	False	NA	-12	True	AATAAA	-15	NA	21898975	21897248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17584_13	chr14	-	1041	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1203	-13	121	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTAGAGTTCCAA	NA	False	NA	-7	True	AATAAA	-15	NA	21898975	21897125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17585_14	chr14	-	952	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	38	1324	38	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21899007	21897246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17587_27	chr14	-	994	6	FSM	ENSMUSG00000021773.12	ENSMUST00000022295.4	981	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	266	junction_1	9.09065454189081	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898975	21897246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17589_4	chr14	-	1108	6	NIC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	244	junction_2	16.9870538940689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21898978	21897247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_1759_7	chr10	-	882	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	-53	23	-8	-23	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATTAAAAAA	4116	False	NA	NA	False	NA	NA	NA	88339840	88322926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
Isoform_17590_6	chr14	-	1180	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	276	junction_4	6.05702071979286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTCTGAGCATCCTCTT	NA	False	NA	-12	True	AATAAA	-15	NA	21898977	21897248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17591_4	chr14	-	1302	4	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-13	3	intron_retention	FALSE	canonical	3	276	junction_3	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTTCTGAGCATCCTCT	NA	False	NA	-13	True	AATAAA	-14	NA	21898975	21897249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_21898189_21898277_21898384_21898608_21898737_21898846
Isoform_17592_12	chr14	-	2495	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33205	1	1604	-1	3prime_fragment	TRUE	canonical	3	145	junction_4	6.05309838016862	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTGTGTAGACCCTG	NA	False	NA	-5	True	AATAAA	-15	NA	24194652	24184021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
Isoform_17595_34	chr14	-	4663	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	26	-2	-17	2	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGTTTTTTGTTAA	NA	False	NA	-1	True	AATACA	-28	NA	24537094	24498761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
Isoform_17596_8	chr14	-	4685	31	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.5137632677065	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTAAGTGTTTTTTGTT	NA	False	NA	-3	True	AATACA	-26	NA	24537120	24498763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511937_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
Isoform_17598_5	chr14	-	3355	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-2	1203	-2	-1201	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	25769465	25713268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
Isoform_17599_22	chr14	-	550	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-13	-1	-11	1	multi-exon	FALSE	canonical	3	49	junction_3	71.4624998785299	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25902911	25888826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
Isoform_1760_57	chr10	-	1281	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-619	-16	1	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520893	88511132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_17600_5	chr14	-	941	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-13	-392	-11	392	multi-exon	TRUE	canonical	3	49	junction_3	71.4624998785299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTTCTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	25902911	25888435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
Isoform_17601_8	chr14	-	618	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	38	899	38	0	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTAGCCATGACCTC	NA	False	NA	-15	True	AATAAA	-17	NA	25903486	25888828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_17602_12	chr14	-	535	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	123	897	123	1	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903401	25888826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_17603_26	chr14	-	503	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	155	897	155	1	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903369	25888826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_17604_3	chr14	-	957	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	92	506	92	392	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTTCTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	25903432	25888435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_17605_5	chr14	-	896	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	143	516	143	382	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGCATTTCCAGTTT	NA	False	NA	NA	False	NA	NA	NA	25903381	25888445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
Isoform_17606_9	chr14	-	411	4	NNC	ENSMUSG00000095304.10	novel	439	4	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	82.174610839764	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25902911	25888826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25902843
Isoform_17607_4	chr14	-	410	4	NNC	ENSMUSG00000095304.10	novel	1555	4	NA	NA	-448	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	90.1122756466744	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGCCATGACCTCTG	NA	False	NA	-13	True	AATAAA	-19	NA	25903972	25888826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25903905
Isoform_17608_37	chr14	-	1249	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	869	0	1	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTCTTGATCGTGAT	NA	False	NA	-12	True	NA	NA	NA	25928067	25924592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_17610_16	chr14	-	1392	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	57	698	28	172	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCACATGCATCTGAGT	NA	False	NA	-6	True	AGTAAA	-17	NA	25928039	25924421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_17612_9	chr14	-	1299	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	-20	868	-20	2	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCTTGATCGTGATG	NA	False	NA	-11	True	NA	NA	NA	25928116	25924591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_17614_5	chr14	-	1502	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	-44	689	-44	181	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTGAGTTCTTTTGGT	NA	False	NA	3	True	AGTAAA	-26	NA	25928140	25924412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
Isoform_17616_5	chr14	-	5452	24	FSM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	16	8	16	-1	multi-exon	FALSE	canonical	3	93	junction_11	42.4199902941944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCATGTTTGAGTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	26256070	26134330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_17617_17	chr14	-	5336	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	False	NA	-3	True	AATAAA	-19	NA	26256052	26134326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
Isoform_1762_13	chr10	-	1779	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-1117	-16	-1	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	88520893	88510634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_17620_3	chr14	-	2705	3	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	16	-72163	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	107.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	26256070	26253117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_26254406_26254430_26255780_26256002
Isoform_17621_21	chr14	-	3342	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	218	4165	218	-4165	multi-exon	FALSE	canonical	3	278	junction_2	18	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGATGTTACCAAATT	NA	False	NA	NA	False	AATAAA	-12	NA	26390820	26385277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_17622_72	chr14	-	2670	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	-7	5062	-7	-5062	multi-exon	FALSE	canonical	3	278	junction_2	18	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATAGCTTCTTCGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	26391045	26386174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_17623_392	chr14	-	2437	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	226	5062	226	-5062	multi-exon	FALSE	canonical	3	278	junction_2	18	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATAGCTTCTTCGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	26390812	26386174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26387123_26387532_26387612_26389402
Isoform_17629_39	chr14	-	2433	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	652	4557	-75	-4557	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCTTTCCTAAACAAG	NA	False	NA	-2	True	AATAAA	-21	NA	26692537	26645501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_17630_9	chr14	-	3126	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	664	3852	-63	-3852	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCTTTTGAATTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	26692525	26644796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
Isoform_17638_19	chr14	-	2954	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-13	1321	-13	1	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTGTCA	7513	False	NA	NA	False	AATAAA	-16	NA	27230430	27204367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
Isoform_17639_3	chr14	-	2934	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	19.957767911267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAATCTCTTG	7504	False	NA	NA	False	AATAAA	-13	NA	27230439	27204370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
Isoform_1764_6	chr10	-	1680	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	88520893	88510637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
Isoform_17641_9	chr14	-	2776	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	2	-1	0	1	multi-exon	TRUE	canonical	3	76	junction_17	15.936508975905	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTGGGGACATTTAT	5423	False	NA	-2	True	AATAAA	-18	NA	30348165	30317309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
Isoform_17642_9	chr14	-	709	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	299	0	-4	0	multi-exon	FALSE	canonical	3	32	junction_2	828.969775618441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723330	30721782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
Isoform_17644_519	chr14	-	702	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	1	-1	1	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723319	30721782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
Isoform_17645_62	chr14	-	945	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	4	0	4	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723562	30721782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
Isoform_17648_15	chr14	-	1797	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_10	218.114789100808	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741021	30734389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_1765_8	chr10	-	1185	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520893	88511132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
Isoform_17650_336	chr14	-	1856	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	91	0	-17	0	multi-exon	TRUE	canonical	3	775	junction_10	82.9678140200482	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741018	30734389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
Isoform_17658_53	chr14	-	382	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	-71	0	4	0	multi-exon	FALSE	canonical	3	152	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTTCAGCCATTTT	NA	False	NA	-11	True	AATAAA	-18	NA	30850866	30846461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30846567_30850589
Isoform_17659_18	chr14	-	449	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-6	-17	4	17	multi-exon	FALSE	canonical	3	53	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATCTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	30850866	30846618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30846791_30850589
Isoform_17661_56	chr14	-	5452	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	106	1	5	-1	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9427	False	NA	-5	True	AATAAA	-16	NA	30928652	30892887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_17662_34	chr14	-	2630	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	146	4	20	-4	multi-exon	TRUE	canonical	3	57	junction_1	267.283529621824	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCACATCTTTTTC	9442	False	NA	-1	True	AATAAA	-16	NA	30928637	30905273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_17663_24	chr14	-	2385	11	FSM	ENSMUSG00000021910.16	ENSMUST00000165981.8	2415	11	0	30	0	6	multi-exon	FALSE	canonical	3	935	junction_6	81.5207948930824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	9422	False	NA	NA	False	AATGAA	-5	NA	30928657	30907676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
Isoform_17664_5	chr14	-	2095	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	-11	0	-11	0	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	-3	True	AATAAA	-14	NA	30973285	30959651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
Isoform_17665_9	chr14	-	1978	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	-13	6	-11	0	multi-exon	FALSE	canonical	3	15	junction_2	5.27280467453541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	-3	True	AATAAA	-14	NA	30973285	30959651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
Isoform_17666_8	chr14	-	2500	9	FSM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	0	184	0	-184	multi-exon	FALSE	canonical	1	5	junction_3	1.69096865730859	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAGAAAAC	5908	False	NA	NA	False	NA	NA	NA	31158022	31095925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31156039_31156103_31157767
Isoform_17667_22	chr14	-	2281	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-293	656	0	114	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGTTTTGTTTTGTT	6652	False	NA	NA	False	AGTAAA	-30	NA	31363214	31329811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
Isoform_17669_20	chr14	-	2950	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	4	-1	4	1	multi-exon	FALSE	canonical	3	570	junction_1	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGTTTTCTTGAAGC	NA	False	NA	-5	True	AATAAA	-14	NA	31807562	31802524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31805204_31806863_31806939_31807366
Isoform_1767_6	chr10	-	2197	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	2	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGTAGACTGTCTCT	NA	False	NA	-3	True	AATAAA	-24	NA	88520893	88511131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_17671_302	chr14	-	649	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	2304	0	-1	multi-exon	FALSE	canonical	3	570	junction_1	6	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807566	31804829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31805204_31806863_31806939_31807366
Isoform_17672_5	chr14	-	518	3	FSM	ENSMUSG00000021905.15	ENSMUST00000167796.2	591	3	69	4	-14	0	multi-exon	FALSE	canonical	3	8	junction_2	281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCTGAGTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	31807580	31804832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31805204_31806863_31806939_31807508
Isoform_17673_18	chr14	-	574	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	120	115	0	-1	multi-exon	FALSE	canonical	3	69	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTGTCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31807566	31804829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31805204_31807366
Isoform_17674_1288	chr14	-	1155	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	15	3	-4	-3	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	1288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAGTATCTCCATTTA	NA	False	NA	NA	False	AATAAA	-37	NA	31923840	31902121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
Isoform_1768_5	chr10	-	1172	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGTAGACTGTCTC	NA	False	NA	-4	True	AATAAA	-23	NA	88520893	88511132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
Isoform_17683_7	chr14	-	2889	12	FSM	ENSMUSG00000021936.15	ENSMUST00000022504.12	2587	12	-45	-257	-32	257	multi-exon	FALSE	canonical	0	0	junction_1	3.14655787270487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAATGATGTCTATA	NA	False	NA	-11	True	AGTAAA	-21	NA	33169147	33102748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_33104277_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
Isoform_17684_11	chr14	-	2887	12	NIC	ENSMUSG00000021936.15	novel	2587	12	NA	NA	-28	254	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.14655787270487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTGAAATGATGTCT	NA	False	NA	-14	True	AGTAAA	-18	NA	33169143	33102751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_33104282_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
Isoform_17685_4	chr14	-	3489	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	-179	7	-52	-7	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTCTGTGAAGCTT	NA	False	NA	-21	True	AATATA	-26	NA	34032502	33958996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
Isoform_17687_4	chr14	-	3548	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-87	-7	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	20.0858158908221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTCTGTGAAGCTT	NA	False	NA	-21	True	AATATA	-26	NA	34032537	33958996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
Isoform_17693_333	chr14	-	439	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-36	5	-36	-5	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34077426	34073842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_34074035_34075654_34075718_34077242
Isoform_17694_48	chr14	-	483	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-80	5	-80	-5	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34077470	34073842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_34074035_34075654_34075718_34077242
Isoform_17696_14	chr14	-	446	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	-6928	-5	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	1267.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCCTGAGTTTACCT	NA	False	NA	-11	True	AATAAA	-16	NA	34084318	34073842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_34074035_34075654_34075718_34084127
Isoform_17697_8	chr14	-	748	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	104	0	104	0	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTTCTTCTTTGTGC	6058	False	NA	NA	False	AATAAA	-19	NA	34096642	34092230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
Isoform_17698_6	chr14	-	3518	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	3	2435	3	1317	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGATCTGGTTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	34224641	34135125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_17699_9	chr14	-	3365	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	156	2435	-3	1317	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGATCTGGTTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	34224488	34135125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
Isoform_17700_5	chr14	-	5484	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-22	-338	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACTTCAGTGATGTGT	NA	False	NA	-11	True	AGTAAA	-13	NA	34224507	34133028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
Isoform_17701_115	chr14	-	2431	8	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	23	23281	23	2573	5prime_fragment	FALSE	canonical	3	53	junction_4	8.04325043443386	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGGAAATAAAGAAAAAA	NA	False	NA	NA	False	AATGAA	-29	NA	36690711	36620173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_17702_18	chr14	-	2487	8	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	-33	23281	-33	2573	5prime_fragment	FALSE	canonical	3	53	junction_4	8.04325043443386	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGGAAATAAAGAAAAAA	NA	False	NA	NA	False	AATGAA	-29	NA	36690767	36620173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
Isoform_1771_3	chr10	-	2974	22	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-10	-21911	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	45.0602519284444	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACAAATAATGCTAATA	NA	False	NA	NA	False	ACTAAA	-36	NA	88662676	88633966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88647293_88647376_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
Isoform_17711_1331	chr14	-	2509	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-46	725	-26	7	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857255	36842773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_17712_216	chr14	-	2876	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	355	-23	-355	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTAAAAGACCTATTGT	NA	False	NA	33	True	CATAAA	-19	NA	36857252	36842403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_17715_1355	chr14	-	1376	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-46	1858	-26	-1126	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTTTCATCTCTTAT	NA	False	NA	-37	True	AATAAA	-19	NA	36857255	36843906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
Isoform_1773_3	chr10	-	3287	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	4	3457	4	179	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGTTTTAATGATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	89279825	89248141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
Isoform_17732_573	chr14	-	2501	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-29	3	-29	-1	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTGGTGATAAATTG	NA	False	NA	46	True	ATTAAA	-15	NA	40688793	40628404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_17734_139	chr14	-	2626	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-154	3	-154	-1	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTGGTGATAAATTG	NA	False	NA	46	True	ATTAAA	-15	NA	40688918	40628404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_17735_143	chr14	-	2554	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-154	75	-154	-73	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTTGTTTGGGTCTTT	NA	False	NA	-26	True	AATATA	-12	NA	40688918	40628476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
Isoform_17738_19	chr14	-	2331	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-29	-73	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	223.728607459838	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTTGTTTGGGTCTTT	NA	False	NA	-26	True	AATATA	-12	NA	40688793	40628476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40688732
Isoform_17739_17	chr14	-	2478	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-84	17	combination_of_known_splicesites	TRUE	canonical	2	11	junction_7	223.728607459838	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTGAGTCAGGTGTGA	NA	False	NA	66	True	ATTAAA	-35	NA	40688848	40628384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40688732
Isoform_1774_3	chr10	-	3283	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	5	3017	5	179	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGTTTTAATGATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	89279824	89248141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
Isoform_17744_5	chr14	-	1636	6	NIC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	-10	4	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	120.659852477947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTCTGTGCACAAGTT	NA	False	NA	-18	True	AATAAA	-15	NA	40735755	40715692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735582
Isoform_17745_30	chr14	-	1544	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	-5	-2	-5	2	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACCTCTGTGCACAAG	NA	False	NA	-20	True	AATAAA	-13	NA	40735737	40715694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
Isoform_17746_4	chr14	-	1658	6	NIC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	-18	1	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	123.38816799029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCACCTCTGTGCACAA	NA	False	NA	-21	True	AATAAA	-12	NA	40735763	40715695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735582
Isoform_17747_33	chr14	-	1587	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	-16	-4	-16	4	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTCTGTGCACAAGTT	NA	False	NA	-18	True	AATAAA	-15	NA	40735761	40715692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
Isoform_17748_8	chr14	-	3626	21	FSM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	-22	1441	-22	1	multi-exon	TRUE	canonical	3	25	junction_19	5.21152568831815	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATTCTTTTGCAT	NA	False	NA	NA	False	ATTAAA	-42	NA	45456904	45372362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
Isoform_17750_11	chr14	-	3151	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	34	1233	34	-1233	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTAGGTCAGTTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	45555995	45521776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_17751_11	chr14	-	4316	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	5	97	5	-97	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTCTGACTGCAGGTA	NA	False	NA	-8	True	NA	NA	NA	45556024	45520640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_17752_46	chr14	-	1601	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	34	2783	34	1867	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTCATGTTTAA	NA	False	NA	-7	True	AGTAAA	-12	NA	45555995	45523326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_17754_7	chr14	-	4380	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	34	4	34	-4	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTTTGGTCTTTGGTC	NA	False	NA	85	True	AATAAA	-16	NA	45555995	45520547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_17757_6	chr14	-	4271	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-100	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.639737711466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGTTCTGACTGCAG	NA	False	NA	-11	True	NA	NA	NA	45555994	45520643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_17759_5	chr14	-	4410	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	4	4	4	-4	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTTTGGTCTTTGGTC	NA	False	NA	85	True	AATAAA	-16	NA	45556025	45520547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
Isoform_1776_4	chr10	-	3093	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	15	3197	2	-1	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAATATATAT	NA	False	NA	NA	False	NA	NA	NA	89279814	89248321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
Isoform_17761_10	chr14	-	2628	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	161	-1	-7	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCCATCAGGTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	45626257	45613789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17762_8	chr14	-	2672	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	117	-1	-51	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCCATCAGGTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	45626301	45613789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17763_14	chr14	-	1904	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	161	723	-7	-723	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATCGTCTTACAGAAAC	NA	False	NA	-4	True	AATAAA	-23	NA	45626257	45614513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17764_12	chr14	-	1927	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	139	722	-29	-722	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCGTCTTACAGAAACA	NA	False	NA	-3	True	AATAAA	-24	NA	45626279	45614512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17766_3	chr14	-	2736	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	53	-1	53	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCCATCAGGTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	45626365	45613789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17768_43	chr14	-	820	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	139	1829	-29	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATATATTTTCAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	45626279	45615619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_1777_3	chr10	-	3408	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	0	158	0	-158	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGAAGTCCACCTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	89522130	89475971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
Isoform_17772_22	chr14	-	935	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	24	1829	24	1	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATATATTTTCAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	45626394	45615619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17773_29	chr14	-	1533	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	138	1117	-30	703	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626280	45614907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17774_12	chr14	-	1648	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	20	1120	20	700	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAATCTTGTCTTGTGTT	NA	False	NA	-4	True	ATTAAA	-27	NA	45626398	45614910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
Isoform_17777_4	chr14	-	1500	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-13	703	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626431	45614907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
Isoform_17779_3	chr14	-	2637	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCCATCAGGTAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	45626450	45613789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
Isoform_1778_77	chr10	-	1705	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	-1	1	-1	-1	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTGTTTAATGTTT	NA	False	NA	-19	True	AATAAA	-20	NA	89568158	89547833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
Isoform_17780_15	chr14	-	3362	14	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	272	1	-60	-1	3prime_fragment	FALSE	canonical	3	310	junction_11	30.5207272668822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTTGTACTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	45767303	45696252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881
Isoform_17782_133	chr14	-	3214	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	78	1	-76	-1	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTTTGTACTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	45767497	45696252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
Isoform_17787_4	chr14	-	3656	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-89	6253	-7	-1	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTCAATTATTTTT	NA	False	NA	59	True	ATTAAA	-17	NA	45895607	45832179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
Isoform_17788_9	chr14	-	3545	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	1	6256	1	-1	multi-exon	TRUE	canonical	3	71	junction_11	14.0049594390305	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTCAATTATTTTT	NA	False	NA	59	True	ATTAAA	-17	NA	45895598	45832179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
Isoform_17791_5	chr14	-	1790	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	73	201	-46	-14	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6438	False	NA	NA	False	NA	NA	NA	46628053	46621177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
Isoform_17792_301	chr14	-	1327	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	102	109	25	-109	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGATGCTTTGCTGTG	NA	False	NA	NA	False	AATAAA	-8	NA	47025766	47013132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_17794_26	chr14	-	1413	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	16	109	16	-109	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGATGCTTTGCTGTG	NA	False	NA	NA	False	AATAAA	-8	NA	47025852	47013132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_17795_26	chr14	-	1430	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	102	6	25	-6	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTATTACATTGTCT	NA	False	NA	NA	False	AATAAA	-25	NA	47025766	47013029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
Isoform_17796_39	chr14	-	4146	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	20	5	20	-5	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTCTAGTGTTTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	47059679	47045610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
Isoform_17798_47	chr14	-	618	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	30	3523	-28	2	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTGTTACTTACA	NA	False	NA	0	True	CATAAA	-17	NA	47059669	47049128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
Isoform_17800_7	chr14	-	3844	3	FSM	ENSMUSG00000062014.14	ENSMUST00000228065.2	280	3	-43	-3521	-15	-4	multi-exon	FALSE	canonical	2	4	junction_2	282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCTAGTGTTTTATT	NA	False	NA	-6	True	AATAAA	-14	NA	47059656	47045609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47049281_47051700_47051775_47059557
Isoform_17802_9	chr14	-	2782	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGGATGTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	47426877	47391351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
Isoform_17804_4	chr14	-	4137	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	37	0	12	0	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514277	47478400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_17806_66	chr14	-	4262	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	-2	0	-2	0	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514291	47478400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_17807_3	chr14	-	4113	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	7	junction_3	89.0967486714219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTTGTCTTGCTATGG	NA	False	NA	-3	True	AATAAA	-17	NA	47514316	47478403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
Isoform_1781_3	chr10	-	6501	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-74	6	-32	1	multi-exon	TRUE	canonical	3	61	junction_15	13.5705476423617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTTGGTTTCGGGA	NA	False	NA	NA	False	AATAAA	-19	NA	90918598	90825178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
Isoform_17810_13	chr14	-	2722	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-37	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	120.677715884546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655672	47625281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_47625577_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_17811_29	chr14	-	2670	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-1	-35	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	102.855729242771	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47655665	47625279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_17812_36	chr14	-	2675	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	0	-37	combination_of_known_junctions	FALSE	canonical	3	64	junction_10	111.61232785134	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655657	47625281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_17813_272	chr14	-	2713	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	207	44	0	-35	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47655657	47625279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
Isoform_17819_75	chr14	-	3431	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	20	-1	-10	0	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47805871	47778349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
Isoform_1782_3	chr10	-	4270	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-78	2241	30	-950	multi-exon	FALSE	canonical	3	61	junction_15	13.5705476423617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGAACAAACCTCAAGAA	NA	False	NA	NA	False	NA	NA	NA	90918602	90827413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
Isoform_17821_15	chr14	-	3755	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6122	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	46.0637359383175	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814228	47778349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814201
Isoform_17822_3	chr14	-	3313	11	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6128	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	47.2847755625423	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47814234	47778351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47813988_47814069_47814201
Isoform_17823_8	chr14	-	2106	3	FSM	ENSMUSG00000021848.17	ENSMUST00000122009.8	1737	3	124	-493	124	-1	multi-exon	FALSE	canonical	3	33	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTCTAGTTTAATT	NA	False	NA	-2	True	ATTAAA	-15	NA	48900205	48895134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_48896784_48898755_48898908_48899900
Isoform_17825_6	chr14	-	1892	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-91	7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48900420	48895300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
Isoform_17826_15	chr14	-	2769	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	251	9679	-6	-14	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCAGTTTTTCAGTGAA	NA	False	NA	NA	False	ATTAAA	-35	NA	49303859	49251225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
Isoform_17829_5	chr14	-	4402	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	244	8053	-13	1612	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303866	49249599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
Isoform_17831_3	chr14	-	4635	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	234	7830	-23	1835	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTATTCTTTGCATTT	NA	False	NA	5	True	AATAAA	-21	NA	49303876	49249376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
Isoform_17832_3	chr14	-	2748	8	FSM	ENSMUSG00000036242.16	ENSMUST00000118129.2	3100	8	0	352	0	-352	multi-exon	FALSE	canonical	2	2	junction_1	11.3730795642829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCCTTTTCTTGGTTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	50020828	49919476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49919871_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_17833_3	chr14	-	3110	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	8	5713	-4	3	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGCTTGCTTTCTTAA	NA	False	NA	NA	False	CATAAA	-13	NA	50020832	49919121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_17834_17	chr14	-	2752	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	12	6067	0	-351	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50020828	49919475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_17835_18	chr14	-	2522	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	5	6304	5	-588	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAGTATCTCACCACC	NA	False	NA	NA	False	AATAAA	-10	NA	50020835	49919712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_17836_7	chr14	-	3032	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	4	5795	4	-79	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTCTCTTTCATAGT	NA	False	NA	NA	False	ATTAAA	-23	NA	50020836	49919203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
Isoform_17838_790	chr14	-	1826	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	6	10	6	-10	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTACCCTATAGTT	NA	False	NA	-16	True	ATTAAA	-11	NA	51022970	51002881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_17840_10	chr14	-	1734	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	6	-10	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	273.975820100972	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTACCCTATAGTT	NA	False	NA	-16	True	ATTAAA	-11	NA	51022970	51002881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_17841_9	chr14	-	2781	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-9	-406	-5	406	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	51022961	51012500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
Isoform_17845_74	chr14	-	1493	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	14	2	14	-2	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8890	False	NA	-1	True	AATAAA	-18	NA	51033171	51026706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
Isoform_17846_3	chr14	-	1549	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	90.8745701502901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTCTT	8899	False	NA	-5	True	AATAAA	-14	NA	51033162	51026710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_51027470_51029429_51029764_51031014_51031332_51032164_51032234_51033092
Isoform_17847_5	chr14	-	1486	10	ISM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	40494	3	5	-3	3prime_fragment	FALSE	canonical	3	29	junction_7	7.57187779440036	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51067523	51061518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328
Isoform_17848_512	chr14	-	1237	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	62	2089	-1	-1	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTTGTGTTTTTCAGT	NA	False	NA	-2	True	AATAAA	-23	NA	51162288	51153139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
Isoform_17849_73	chr14	-	1277	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	20	2091	-1	1	multi-exon	FALSE	canonical	3	62	junction_9	170.895289578151	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTTGTGTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	51162330	51153141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
Isoform_17853_7	chr14	-	1180	10	NIC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	240.470577754186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTTGTGTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	51162312	51153141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
Isoform_17856_7	chr14	-	1641	7	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	298.976030254378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168308	51164672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_51165495_51166277_51166369_51166462_51166516_51166626_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_17857_10	chr14	-	2393	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	6	356	-5	-356	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGGTCTAAGAAAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	51168300	51163880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_17858_218	chr14	-	1598	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	9	1148	-2	1	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168297	51164672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_17859_64	chr14	-	1644	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-37	1148	-30	1	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168343	51164672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_17861_92	chr14	-	1575	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	16	3	-2	-1	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168297	51164674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
Isoform_17862_9	chr14	-	2378	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	5	-789	0	-358	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGGTCTAAGAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	51168308	51163882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
Isoform_17863_19	chr14	-	1501	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	-39	3	0	-1	multi-exon	FALSE	canonical	3	65	junction_3	295.870647412007	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168308	51164674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
Isoform_17864_7	chr14	-	1482	6	FSM	ENSMUSG00000035953.15	ENSMUST00000161166.8	1445	6	-38	1	0	1	multi-exon	FALSE	canonical	3	65	junction_3	330.807859640608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168308	51164672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168090
Isoform_17865_9	chr14	-	1761	6	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	1	intron_retention	FALSE	canonical	3	698	junction_5	55.1049906995728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCCCACTTAACAACT	NA	False	NA	-10	True	AATAAA	-17	NA	51168317	51164672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168069
Isoform_17869_16	chr14	-	2002	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	76	21	0	-9	multi-exon	FALSE	canonical	3	23	junction_14	42.8779145429854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	False	NA	-20	True	AATAAA	-7	NA	52150811	52142748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
Isoform_17871_42	chr14	-	1980	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	124	-1	-6	1	multi-exon	TRUE	canonical	3	127	junction_6	11.1385064766607	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATTGTTAATCCGGGT	NA	False	NA	-10	True	AATAAA	-17	NA	52150821	52142738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
Isoform_17873_7	chr14	-	2117	15	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	33.5830526988156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATTGTTAATCCGGGT	9368	False	NA	-10	True	AATAAA	-17	NA	52151559	52142738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52151380
Isoform_17879_19	chr14	-	2820	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	155.633182515812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	9467	False	NA	-8	True	AATAAA	-19	NA	52248337	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52248238
Isoform_17881_35	chr14	-	2810	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	-12	6	-12	-1	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5753	False	NA	-8	True	AATAAA	-19	NA	52252051	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
Isoform_17884_12	chr14	-	2999	6	FSM	ENSMUSG00000049295.18	ENSMUST00000166169.4	3017	6	24	-6	24	2	multi-exon	FALSE	canonical	3	13	junction_5	162.277540035582	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	5763	False	NA	-5	True	AATAAA	-22	NA	52257121	52243536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52256951
Isoform_17886_16	chr14	-	3240	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	162.023948847076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5735	False	NA	-8	True	AATAAA	-19	NA	52257149	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52256951
Isoform_17887_11	chr14	-	3095	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-87	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	164.327234504814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5627	False	NA	-8	True	AATAAA	-19	NA	52257257	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257204
Isoform_17890_8	chr14	-	3038	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	164.069009870847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5764	False	NA	-8	True	AATAAA	-19	NA	52257120	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52256951
Isoform_17893_17	chr14	-	2923	5	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	155.633182515812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5731	False	NA	-8	True	AATAAA	-19	NA	52257153	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52256951
Isoform_17898_215	chr14	-	2919	5	FSM	ENSMUSG00000049295.18	ENSMUST00000067549.15	2933	5	13	1	-1	-1	multi-exon	FALSE	canonical	3	82	junction_4	128.195895020082	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	4707	False	NA	-8	True	AATAAA	-19	NA	52258177	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257979
Isoform_17901_23	chr14	-	2833	4	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	179.668831155793	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5732	False	NA	-8	True	AATAAA	-19	NA	52257152	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52256951
Isoform_17904_260	chr14	-	2830	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	-19	1	-1	-1	multi-exon	FALSE	canonical	3	96	junction_3	140.753527684231	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	4707	False	NA	-8	True	AATAAA	-19	NA	52258177	52243539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
Isoform_17913_53	chr14	-	2582	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	4	-903	0	-5	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8754	False	NA	-43	True	AATAAA	-14	NA	52341456	52311006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17915_149	chr14	-	1339	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	-1	345	0	1	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTCCAAAATAATC	8749	False	NA	43	True	AATAAA	-19	NA	52341461	52312254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17917_41	chr14	-	2568	8	NIC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1178.64943464794	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8754	False	NA	-31	True	AATAAA	-26	NA	52341456	52310994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17919_91	chr14	-	1310	8	NIC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1178.64943464794	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8754	False	NA	45	True	AATAAA	-21	NA	52341456	52312252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17924_63	chr14	-	1380	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-5	1123	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8749	False	NA	42	True	AATAAA	-18	NA	52341461	52312255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17929_41	chr14	-	1352	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8754	False	NA	45	True	AATAAA	-21	NA	52341456	52312252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
Isoform_17938_252	chr14	-	1341	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	3	347	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8749	False	NA	42	True	AATAAA	-18	NA	52341461	52312255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17939_89	chr14	-	2602	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	3	-914	0	7	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8749	False	NA	-31	True	AATAAA	-26	NA	52341461	52310994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17947_79	chr14	-	2564	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8749	False	NA	-43	True	AATAAA	-14	NA	52341461	52311006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_1795_2003	chr10	-	1342	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	53	217	-3	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959868	90952652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
Isoform_17950_204	chr14	-	1310	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8754	False	NA	42	True	AATAAA	-18	NA	52341456	52312255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17954_39	chr14	-	1405	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	23	1419	0	3	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8748	False	NA	45	True	AATAAA	-21	NA	52341462	52312252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17957_35	chr14	-	1375	8	NIC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8749	False	NA	42	True	AATAAA	-18	NA	52341461	52312255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
Isoform_17959_108	chr14	-	2606	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	6	5	0	-5	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8754	False	NA	-43	True	AATAAA	-14	NA	52341456	52311006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_1796_38	chr10	-	1558	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	53	1	-3	-1	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGTTTTATTTTTTTG	NA	False	NA	-1	True	ATTAAA	-17	NA	90959868	90952436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
Isoform_17963_232	chr14	-	1358	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	6	1253	0	1	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTCCAAAATAATC	8754	False	NA	43	True	AATAAA	-19	NA	52341456	52312254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
Isoform_17965_53	chr14	-	2578	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-28	-1249	2	-5	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGTTAGAAGCTGG	8756	False	NA	-43	True	AATAAA	-14	NA	52341454	52311006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17969_117	chr14	-	1328	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-28	1	2	-1	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8756	False	NA	41	True	AATAAA	-17	NA	52341454	52312256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17970_54	chr14	-	1356	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-52	-3	7	3	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8732	False	NA	45	True	AATAAA	-21	NA	52341478	52312252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
Isoform_17986_142	chr14	-	4472	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	176	25	176	-25	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434697	52397895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
Isoform_17988_14	chr14	-	4666	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	-18	25	-18	-25	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434891	52397895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
Isoform_18007_18	chr14	-	2033	6	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	12	-3262	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	13.0230564768798	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATACAGAGGACCT	9254	False	NA	NA	False	NA	NA	NA	52481954	52465107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481889
Isoform_18008_16	chr14	-	2096	6	ISM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	-25	29500	-25	-3262	5prime_fragment	FALSE	canonical	3	27	junction_5	9.99199679743744	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATACAGAGGACCT	406	False	NA	NA	False	NA	NA	NA	52495262	52465107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
Isoform_18010_3	chr14	-	2597	7	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	516	3	212	-3	3prime_fragment	FALSE	canonical	3	132	junction_5	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCATGTGTCATTTCT	NA	False	NA	-2	True	ATTAAA	-24	NA	52516486	52499218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370
Isoform_18011_23	chr14	-	2660	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	240	6	-7	1	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTCATGTGTCATT	NA	False	NA	-5	True	ATTAAA	-21	NA	52516762	52499221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
Isoform_18015_69	chr14	-	2010	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	11	4	7	-4	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTATGGCTTTCCACTT	NA	False	NA	-20	True	AATAAA	-35	NA	52542574	52532301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
Isoform_18018_274	chr14	-	648	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	223	7	33	-7	multi-exon	FALSE	canonical	3	1530	junction_1	8	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATTCGTTCCTTCAT	NA	False	NA	-18	True	ATTAAA	-17	NA	54491338	54472942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54473171_54480155_54480326_54491088
Isoform_18019_6	chr14	-	848	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	23	7	23	-7	multi-exon	FALSE	canonical	3	1530	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATTCGTTCCTTCAT	NA	False	NA	-18	True	ATTAAA	-17	NA	54491538	54472942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54473171_54480155_54480326_54491088
Isoform_18021_6	chr14	-	2361	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-183	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655420	54606899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
Isoform_18022_16	chr14	-	2316	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-139	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655376	54606900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
Isoform_18023_6	chr14	-	2522	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	58.1421739935326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655303	54606900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54654944
Isoform_18024_29	chr14	-	2204	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	53.1871792169678	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655398	54606900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655357
Isoform_18025_20	chr14	-	2258	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-142	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	49.5403667112416	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655379	54606899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655357
Isoform_18027_4	chr14	-	3155	10	ISM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	-143	0	-42	0	intron_retention	FALSE	canonical	3	45	junction_9	39.09279874325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54655279	54606898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045
Isoform_18028_13	chr14	-	2439	11	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	51.7787601242054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655281	54606899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54654944
Isoform_1803_241	chr10	-	3538	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007449	90983432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_18030_5	chr14	-	2269	11	FSM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	-146	3	-45	0	multi-exon	FALSE	canonical	3	16	junction_10	53.6977653166312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655282	54606901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655113
Isoform_18031_26	chr14	-	2122	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_9	44.7447203589429	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655378	54606900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655357
Isoform_18032_10	chr14	-	1943	10	NNC	ENSMUSG00000000958.11	novel	2132	10	NA	NA	-143	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	51.9767279358135	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655380	54606899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54655357
Isoform_18035_444	chr14	-	2526	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	155	10	-9	-10	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4850	False	NA	-21	True	AATAAA	-15	NA	54754827	54744653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
Isoform_1804_666	chr10	-	1998	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-8	1543	-8	2	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATGACTTATTCT	NA	False	NA	-5	True	ATTAAA	-20	NA	91007452	90984975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_18042_214	chr14	-	1528	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	59	0	59	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791759	54779241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
Isoform_18043_66	chr14	-	1574	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	13	0	13	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791805	54779241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
Isoform_18044_433	chr14	-	3372	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	25	0	25	0	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	False	NA	-6	True	AGTAAA	-18	NA	54814990	54804928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
Isoform_18045_115	chr14	-	3407	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	False	NA	-6	True	AGTAAA	-18	NA	54815025	54804928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
Isoform_18049_29	chr14	-	2596	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	74	0	74	0	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTGGGCTTAGT	NA	False	NA	-1	True	NA	NA	NA	54843376	54821119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
Isoform_18051_2754	chr14	-	881	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	18	0	4	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	2754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8642	False	NA	-17	True	AATAAA	-18	NA	54855461	54851575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54851939_54853971_54854279_54855250
Isoform_18057_3	chr14	-	2463	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	46	junction_12	164.741948884376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3752	False	NA	-3	True	AATAAA	-22	NA	54891144	54879620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_18059_3	chr14	-	2461	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_12	150.58939759049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_18060_8	chr14	-	2397	12	NIC	ENSMUSG00000022185.20	novel	2381	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	94	junction_11	134.131858154209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3759	False	NA	0	True	AATAAA	-25	NA	54891137	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890991
Isoform_18061_8	chr14	-	2273	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-5	1	intron_retention	FALSE	canonical	2	44	junction_11	143.681063240374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTGAGTGCCTTTCC	3733	False	NA	-5	True	AATAAA	-20	NA	54891163	54879622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54891136
Isoform_18062_10	chr14	-	2276	11	ISM	ENSMUSG00000022185.20	ENSMUST00000022794.14	2365	13	1836	9	1380	-3	3prime_fragment	FALSE	canonical	3	99	junction_9	106.849613944085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCATTTGAGTGCCT	5580	False	NA	-9	True	AATAAA	-16	NA	54889316	54879626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173
Isoform_18063_3	chr14	-	2497	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_12	150.124947960024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3757	False	NA	0	True	AATAAA	-25	NA	54891139	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_18064_5	chr14	-	2533	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_12	153.646306496447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890775_54890991
Isoform_18065_7	chr14	-	2437	12	NIC	ENSMUSG00000022185.20	novel	2381	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	94	junction_11	133.183462602321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3752	False	NA	0	True	AATAAA	-25	NA	54891144	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890991
Isoform_18066_5	chr14	-	2303	12	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	-3	0	intron_retention	FALSE	canonical	2	44	junction_11	142.865538124038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3741	False	NA	0	True	AATAAA	-25	NA	54891155	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54891136
Isoform_18067_23	chr14	-	2288	11	ISM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	1757	0	1380	0	3prime_fragment	FALSE	canonical	3	314	junction_9	54.4140606828786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	5580	False	NA	0	True	AATAAA	-25	NA	54889316	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173
Isoform_18069_18	chr14	-	2496	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	3	-5	2	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3760	False	NA	-1	True	AATAAA	-24	NA	54891136	54879618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
Isoform_1807_15	chr10	-	2046	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-56	1543	-56	2	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATGACTTATTCT	NA	False	NA	-5	True	ATTAAA	-20	NA	91007500	90984975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_18070_9	chr14	-	2545	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	25	junction_12	135.990706381805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3751	False	NA	0	True	AATAAA	-25	NA	54891145	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
Isoform_18071_21	chr14	-	2432	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	-63	0	2	0	multi-exon	FALSE	canonical	3	94	junction_11	105.5899600787	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3760	False	NA	0	True	AATAAA	-25	NA	54891136	54879617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
Isoform_18072_14	chr14	-	2303	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	44	junction_11	118.32012885626	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTGCCTTTCCTTG	3742	False	NA	-2	True	AATAAA	-23	NA	54891154	54879619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
Isoform_18074_3	chr14	-	4628	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	-16	-564	-16	-2	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2614	False	NA	-3	True	AATAAA	-22	NA	54924404	54879620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
Isoform_18090_10	chr14	-	2622	9	ISM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	-42	9566	-42	-212	5prime_fragment	FALSE	canonical	3	51	junction_6	35.6035022855898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAGGTAACTAGCC	2588	False	NA	9	True	NA	NA	NA	54924430	54889183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
Isoform_18096_3	chr14	-	3029	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27193	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAGTGATGGAGTTA	2355	False	NA	NA	False	AATAAA	-11	NA	54992194	54959673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
Isoform_18097_7	chr14	-	2923	2	FSM	ENSMUSG00000057156.11	ENSMUST00000142283.4	4713	2	20	1770	20	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTTTGCCACTTCTG	5548	False	NA	-10	True	AATAAA	-29	NA	55101595	55093013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55095739_55101397
Isoform_18098_9	chr14	-	2361	8	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	-9	3	intron_retention	FALSE	canonical	1	1	junction_4	3.10365156891435	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCCCTCCCTGTGTT	NA	False	NA	-5	True	AATAAA	-33	NA	55150569	55144191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
Isoform_18099_11	chr14	-	3452	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	-841	94	-629	4	multi-exon	TRUE	canonical	3	20	junction_2	3.32264954516723	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCTTGAAAGCTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	55164212	55154085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
Isoform_18102_3	chr14	-	2722	21	ISM	ENSMUSG00000040701.17	ENSMUST00000170285.2	2596	22	-118	-4	2	-1	intron_retention	TRUE	canonical	3	99	junction_4	12.6388290596875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55343722	55336307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381
Isoform_18104_117	chr14	-	2640	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	32	1	0	-1	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55344018	55336307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_18106_12	chr14	-	2582	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	-15	106	-15	98	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGCGTACAAATTAGA	NA	False	NA	1	True	AATAAA	-40	NA	55344065	55336412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_18107_6	chr14	-	2503	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	30.3714915669284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTAGCTGTGAAGT	NA	False	NA	-25	True	AATAAA	-13	NA	55344008	55336309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55343381_55343587_55343964
Isoform_18108_4	chr14	-	2859	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	99	junction_4	13.1273569312333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTAGCTGTGAAGTGG	NA	False	NA	-23	True	AATAAA	-15	NA	55344018	55336307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
Isoform_18109_22	chr14	-	829	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	28	-2	28	1	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTATTTATTGTGTTT	NA	False	NA	-3	True	AATAAA	-19	NA	55822731	55818976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
Isoform_18110_412	chr14	-	826	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	136	0	-3	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	55828408	55824897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
Isoform_18113_218	chr14	-	3473	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	50	323	-3	-1	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGGAAGCAGCTGT	9795	False	NA	-10	True	AATAAA	-18	NA	55873091	55863179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_18115_21	chr14	-	3579	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	32	235	-21	-1	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTAGCTTTCTGCACAA	9777	False	NA	78	True	AATAAA	-21	NA	55873109	55863091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_18117_10	chr14	-	3799	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	32	15	-21	-15	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGGCAAAGT	9777	False	NA	NA	False	NA	NA	NA	55873109	55862871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_18119_53	chr14	-	3487	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	9777	False	NA	-8	True	AATAAA	-20	NA	55873109	55863177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
Isoform_18122_378	chr14	-	2476	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-6	-88	-6	-4	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5200	False	NA	44	True	AATAAA	-12	NA	55880803	55873428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
Isoform_18125_16	chr14	-	2428	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-28	-18	3	18	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCTTACGTTTTGG	5178	False	NA	-26	True	ATTAAA	-40	NA	55880825	55873498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
Isoform_18127_9	chr14	-	2304	6	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	2	29	junction_5	125.802384715076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5198	False	NA	44	True	AATAAA	-12	NA	55880805	55873428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880586
Isoform_18128_26	chr14	-	2264	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	-107	7	3	-4	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5188	False	NA	44	True	AATAAA	-12	NA	55880815	55873428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
Isoform_18129_8	chr14	-	2298	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	212	7	-34	-4	multi-exon	FALSE	canonical	2	8	junction_5	133.851260733696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	4952	False	NA	44	True	AATAAA	-12	NA	55881051	55873428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
Isoform_18130_12	chr14	-	2307	6	NIC	ENSMUSG00000002320.16	novel	2517	6	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	134.620057940858	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGATCCTGTCGTTGG	4727	False	NA	43	True	AATAAA	-11	NA	55881276	55873429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55881053
Isoform_18131_17	chr14	-	2540	5	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	139.257854356586	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5197	False	NA	44	True	AATAAA	-12	NA	55880806	55873428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_55874070_55875315_55875651_55877841_55878028_55878423_55879046_55880050
Isoform_18132_7	chr14	-	2200	4	NIC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	-6	-6	combination_of_known_splicesites	TRUE	canonical	1	6	junction_1	167.004989945411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGGATCCTGTCGTTG	5200	False	NA	42	True	AATAAA	-10	NA	55880803	55873430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55874070_55877841_55878028_55878423_55879046_55880050
Isoform_18133_12	chr14	-	2611	3	ISM	ENSMUSG00000002320.16	ENSMUST00000132338.8	1742	5	186	1493	3	770	intron_retention	FALSE	canonical	3	352	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAAGCGT	5209	False	NA	NA	False	NA	NA	NA	55880794	55876782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55878028_55878423_55879046_55880050
Isoform_18136_8	chr14	-	706	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	35	992	-22	887	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTTGTTTCCATTTT	2320	False	NA	-16	True	ATTAAA	-34	NA	55897930	55896327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_18137_47	chr14	-	1662	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	58	13	1	2	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAGACAATTTTCTT	2343	False	NA	-21	True	AATAAA	-16	NA	55897907	55895348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_18138_82	chr14	-	684	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	57	992	0	887	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTTGTTTCCATTTT	2342	False	NA	-16	True	ATTAAA	-34	NA	55897908	55896327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_18139_3	chr14	-	1720	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	-2	15	-2	0	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGACAATTTTC	2283	False	NA	-23	True	AATAAA	-14	NA	55897967	55895350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
Isoform_18140_29	chr14	-	1732	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	0	-2	0	2	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAGACAATTTTCTT	2342	False	NA	-21	True	AATAAA	-16	NA	55897908	55895348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
Isoform_18143_356	chr14	-	586	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	238	0	-9	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909343	55899719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
Isoform_18144_188	chr14	-	800	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	22	2	22	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909559	55899721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
Isoform_18146_9	chr14	-	642	4	FSM	ENSMUSG00000010376.16	ENSMUST00000228414.2	516	4	-3	-123	-3	0	multi-exon	FALSE	canonical	3	19	junction_3	873.770501269578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909337	55899719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55900083_55900871_55900955_55901268_55901379_55909251
Isoform_18149_6	chr14	-	2474	9	FSM	ENSMUSG00000007589.10	ENSMUST00000227842.2	2001	9	-63	-410	-4	410	multi-exon	FALSE	canonical	3	16	junction_1	108.661170617659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGTTGTTAGTTTG	NA	False	NA	0	True	AATAAA	-18	NA	55919265	55913664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55914739_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_1815_15	chr10	-	1880	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-24	-2	-10	2	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATGACTTATTCT	NA	False	NA	-5	True	ATTAAA	-20	NA	91007454	90984975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
Isoform_18150_224	chr14	-	1706	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	12	1238	-4	1103	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919265	55916560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_18151_3	chr14	-	3024	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	-11	-57	-11	3	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACAGCTTGTGTGAGT	NA	False	NA	NA	False	TATAAA	-11	NA	55919288	55915265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_18152_3	chr14	-	4598	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	14	-1656	-2	408	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTTGTTGTTAGTT	NA	False	NA	-2	True	AATAAA	-16	NA	55919263	55913666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_18153_3	chr14	-	1552	9	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	-2	1125	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	110.476241789807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAACAGGCTTCTCTTA	NA	False	NA	-5	True	AATAAA	-35	NA	55919263	55916538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55919020
Isoform_18154_9	chr14	-	1598	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	-4	1103	combination_of_known_junctions	FALSE	canonical	2	15	junction_5	121.452434629986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919265	55916560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
Isoform_18155_5	chr14	-	1868	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-28	1290	6	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919271	55916558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
Isoform_18160_47	chr14	-	2824	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	-3	31	-1	-6	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGATGCTGTTTAGT	395	False	NA	-29	True	AATAAA	-16	NA	55950952	55937496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
Isoform_18161_304	chr14	-	2725	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-1	6	-1	-6	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGATGCTGTTTAGT	395	False	NA	-29	True	AATAAA	-16	NA	55950952	55937496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
Isoform_18162_21	chr14	-	2832	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-109	7	-109	-7	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	287	False	NA	-30	True	AATAAA	-15	NA	55951060	55937497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
Isoform_18164_60	chr14	-	1183	11	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	2356	-17	226	-3	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGCCCTGACAACA	NA	False	NA	-2	True	AATAAA	-36	NA	55957364	55953764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
Isoform_18165_58	chr14	-	1641	11	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	2247	-5	204	5	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55957386	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
Isoform_18166_11	chr14	-	2338	15	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	352	-5	352	5	3prime_fragment	FALSE	canonical	3	306	junction_12	81.9057447338596	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959281	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
Isoform_18168_12	chr14	-	1917	15	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	423	-16	336	-4	3prime_fragment	FALSE	canonical	3	306	junction_12	81.9057447338596	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCTGCCCTGACAAC	NA	False	NA	-3	True	AATAAA	-35	NA	55959297	55953765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
Isoform_18170_18	chr14	-	2582	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	-30	-5	-4	5	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959663	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
Isoform_18172_18	chr14	-	2142	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	-29	434	-3	-6	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACTGCTGCCCTGACA	NA	False	NA	-5	True	AATAAA	-33	NA	55959662	55953767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
Isoform_18174_95	chr14	-	2422	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	4	456	4	5	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959655	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
Isoform_18175_112	chr14	-	1986	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	4	892	4	-3	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTGCCCTGACAACA	NA	False	NA	-2	True	AATAAA	-36	NA	55959655	55953764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
Isoform_18176_178	chr14	-	2333	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-453	0	5	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959714	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
Isoform_18184_11	chr14	-	2519	16	FSM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	-22	-5	4	5	multi-exon	FALSE	canonical	3	103	junction_15	120.970777003741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTTTCTCACCG	NA	False	NA	NA	False	NA	NA	NA	55959655	55953328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
Isoform_18187_13	chr14	-	2428	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	0	3	intron_retention	FALSE	canonical	3	119	junction_15	118.227389193687	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGCTTTCTCAC	NA	False	NA	NA	False	NA	NA	NA	55959714	55953330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
Isoform_18190_84	chr14	-	1403	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	73	1	-18	-1	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGAGTTCTCATTCTG	NA	False	NA	-1	True	AATAAA	-19	NA	55983074	55976477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
Isoform_18192_35	chr14	-	2078	9	ISM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	38	1	-31	-1	intron_retention	FALSE	canonical	3	118	junction_2	9.25928587959136	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAGTCTGAGGTGTCA	NA	False	NA	-4	True	AATAAA	-17	NA	56026276	56022454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
Isoform_18193_5	chr14	-	1825	10	FSM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	42	-2	-27	0	multi-exon	FALSE	canonical	1	2	junction_9	41.6620738209433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026272	56022451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025822_56026073
Isoform_18194_264	chr14	-	1846	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	46	0	-31	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026276	56022451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
Isoform_18195_70	chr14	-	1879	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	13	0	5	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026309	56022451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
Isoform_18197_5	chr14	-	2270	8	NIC	ENSMUSG00000022221.15	novel	1892	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	118	junction_2	9.43938773524674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026276	56022451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024618_56024738_56024897_56025280_56025591_56025694
Isoform_18198_5	chr14	-	1462	5	FSM	ENSMUSG00000022223.10	ENSMUST00000227139.2	867	5	31	-626	0	-1	multi-exon	FALSE	canonical	3	161	junction_3	15.0499169432924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTTCCGCTGTCT	NA	False	NA	-7	True	AATAAA	-19	NA	56137654	56134740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270
Isoform_18200_15	chr14	-	1226	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	29	0	-1	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137686	56134739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
Isoform_18201_3	chr14	-	2123	2	ISM	ENSMUSG00000022223.10	ENSMUST00000228209.2	846	4	-230	-622	-1	-8	intron_retention	FALSE	canonical	3	191	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTAGATCACTGGCTTCC	NA	False	NA	-14	True	AATAAA	-12	NA	56137667	56134747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_56135844_56136640
Isoform_18202_5	chr14	-	2231	4	FSM	ENSMUSG00000022223.10	ENSMUST00000228151.2	385	4	1	-1847	0	-4	multi-exon	FALSE	canonical	3	98	junction_3	32.0312347560939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137668	56134743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56136763_56137103_56137187_56137270_56137378_56137646
Isoform_18203_4	chr14	-	4338	17	NIC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	11.6039796513955	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTTTTACATTCTTT	2393	False	NA	NA	False	AATAAA	-42	NA	56809302	56764220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
Isoform_18205_208	chr14	-	2033	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	0	2081	0	1195	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCTTAGTGGTATTC	NA	False	NA	-3	True	AATAAA	-22	NA	57015773	56960247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_18206_90	chr14	-	2376	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	0	1738	0	1538	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTTTGAAAGTAA	NA	False	NA	-7	True	AATAAA	-15	NA	57015773	56959904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_18207_38	chr14	-	2070	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-37	2081	-37	1195	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCTTAGTGGTATTC	NA	False	NA	-3	True	AATAAA	-22	NA	57015810	56960247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_18208_17	chr14	-	2404	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-28	1738	-28	1538	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGTTTGAAAGTAA	NA	False	NA	-7	True	AATAAA	-15	NA	57015801	56959904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
Isoform_18213_8	chr14	-	2881	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-6	403	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTATTTTTGTTTTCTTG	8834	False	NA	-1	True	NA	NA	NA	57049160	57030381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_18217_3	chr14	-	2925	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-32	402	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	8789	False	NA	-2	True	NA	NA	NA	57049205	57030382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
Isoform_18219_7	chr14	-	2416	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	-1	-9	-1	9	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTCTGGCTTTGATTT	NA	False	NA	NA	False	ATTAAA	-45	NA	57342160	57336047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57338229_57341925
Isoform_18221_7	chr14	-	2341	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	59	6	59	-6	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACCAATGGTAAGTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	57342100	57336062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57338229_57341925
Isoform_18222_21	chr14	-	1450	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	6	41	6	-41	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGCTTATTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57635980	57512490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
Isoform_18225_144	chr14	-	833	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	5	-2	5	1	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	False	NA	-7	True	AATAAA	-21	NA	57809021	57787052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
Isoform_18226_4	chr14	-	671	4	NIC	ENSMUSG00000021951.8	novel	880	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	119.268138615847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809023	57787053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_57787337_57787818_57788100_57795490_57795574_57808999
Isoform_18227_3	chr14	-	3653	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-5	26	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902429	57819701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
Isoform_18228_3	chr14	-	3907	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	9	26	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902683	57819701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
Isoform_18229_21	chr14	-	3485	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	468	4727	2	23	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATCCTTTCTGCAAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	57902419	57819704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_1823_108	chr10	-	3780	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	-12	4	-8	-2	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTTTTGTGTGGTCT	NA	False	NA	-22	True	AATAAA	-12	NA	91007452	90996282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
Isoform_18230_3	chr14	-	4763	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	440	3477	-1	1273	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	57902447	57818454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_18231_4	chr14	-	3691	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	265	4724	70	26	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902622	57819701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
Isoform_18233_3	chr14	-	476	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-23	254	2	-4	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	57902444	57879489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
Isoform_18234_3	chr14	-	1553	4	FSM	ENSMUSG00000021952.17	ENSMUST00000173172.2	1765	4	-23	235	-1	-6	multi-exon	FALSE	canonical	3	67	junction_2	124.493641069199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57902447	57879491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57880681_57880791_57880947_57885875_57885982_57902344
Isoform_18235_3	chr14	-	5176	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	15	0	-3	0	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	57983565	57927118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
Isoform_18237_371	chr14	-	2266	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-5	-1	-5	1	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGTTGCCAACTCT	NA	False	NA	-6	True	AATAAA	-20	NA	58063625	58044016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
Isoform_18247_8	chr14	-	2266	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-66	2986	-66	3	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAGAATGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	58127799	58073145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_18248_30	chr14	-	2844	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-11	2353	-11	636	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127744	58072512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_18254_11	chr14	-	2771	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-15	636	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127748	58072512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_18255_83	chr14	-	2324	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	3	2	3	-2	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGGTCTCTCATCCAT	NA	False	NA	-3	True	NA	NA	NA	58236716	58153719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
Isoform_18259_8	chr14	-	1028	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	-2	7600	-2	85	5prime_fragment	FALSE	canonical	3	228	junction_1	35.692261065951	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACTCAGACTACCCTG	NA	False	NA	NA	False	AGTAAA	-11	NA	58236721	58161317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
Isoform_18260_7	chr14	-	976	8	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	3	10732	3	-3047	5prime_fragment	FALSE	canonical	3	276	junction_1	23.3168065864036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58236716	58164449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
Isoform_18262_13	chr14	-	2986	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	4	5	-3	-3	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTTGTTTTTGTGATT	NA	False	NA	NA	False	TATAAA	-8	NA	59678329	59639462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
Isoform_18264_22	chr14	-	2234	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	-2	-30	0	30	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGTGTTGTTGTTGTT	NA	False	NA	-2	True	NA	NA	NA	59835395	59801394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_18265_4	chr14	-	1888	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	-2	6	0	-6	multi-exon	FALSE	canonical	3	10	junction_1	37.821543276319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGAACAGCTTCATAG	NA	False	NA	NA	False	AATAAA	-23	NA	59835395	59805183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
Isoform_18267_97	chr14	-	3827	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	87	-1	-14	1	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTAGGTCTCAGCAG	NA	False	NA	-15	True	AATAAA	-19	NA	60488869	60455525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
Isoform_18273_28	chr14	-	4009	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	-25	-26	-25	26	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61275424	61201297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
Isoform_18274_8	chr14	-	4245	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-9	-185	-9	24	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTATGTGTCAAGTCAAA	NA	False	NA	-2	True	AATAAA	-19	NA	61283927	61201299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
Isoform_18275_7	chr14	-	4339	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-104	-184	-83	23	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTATGTGTCAAGTCAA	NA	False	NA	-3	True	AATAAA	-18	NA	61284022	61201300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
Isoform_18279_4	chr14	-	640	5	ISM	ENSMUSG00000060548.14	ENSMUST00000225730.2	744	6	-96	22050	-37	-22050	5prime_fragment	FALSE	canonical	3	37	junction_4	19.6532440070335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	61275436	61234020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
Isoform_18280_209	chr14	-	848	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-6	9250	-6	-1227	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGGTGTGACTTAGTA	NA	False	NA	-6	True	ATTAAA	-17	NA	61597894	61578440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
Isoform_18281_6	chr14	-	1068	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-15	9039	-15	-1016	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61597903	61578229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
Isoform_18285_61	chr14	-	4017	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	51	1	51	-1	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATTGAAAGACTTAT	6597	False	NA	-13	True	AATAAA	-21	NA	61677272	61602660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
Isoform_18290_25	chr14	-	4270	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-202	1	-202	-1	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATTGAAAGACTTAT	6344	False	NA	-13	True	AATAAA	-21	NA	61677525	61602660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
Isoform_18296_72	chr14	-	1019	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	129	2854	1	-542	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAATTGAGTGATTATT	NA	False	NA	-6	True	TATAAA	-43	NA	61794206	61772295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
Isoform_18297_10	chr14	-	1998	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	117	1887	-11	425	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGATTTTCATGGTGT	NA	False	NA	0	True	AATAAA	-21	NA	61794218	61771328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
Isoform_18304_4	chr14	-	1073	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	25	-545	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	67.8751795577735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTAATTGAGTGATT	NA	False	NA	-9	True	TATAAA	-40	NA	61794182	61772298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61792219_61792301_61793969
Isoform_18305_3	chr14	-	1894	4	FSM	ENSMUSG00000021930.15	ENSMUST00000100496.5	1459	4	-12	-423	-12	423	multi-exon	FALSE	canonical	3	20	junction_1	60.8075287736277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTGATTTTCATGGT	NA	False	NA	-2	True	AATAAA	-19	NA	61794219	61771330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61772691_61783130_61783298_61787192_61787310_61793969
Isoform_18306_4	chr14	-	2442	3	FSM	ENSMUSG00000097589.10	ENSMUST00000180917.9	3544	3	26	1076	-9	-1076	multi-exon	FALSE	canonical	2	7	junction_2	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAAAAATTATTTTGG	NA	False	NA	NA	False	AGTAAA	-24	NA	61886245	61870873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_61873041_61880808_61880905_61886066
Isoform_18307_4	chr14	-	1396	2	FSM	ENSMUSG00000048281.10	ENSMUST00000063169.10	1314	2	-76	-6	8	6	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCTCTTACTGACTC	591	False	NA	NA	False	ATTAAA	-19	NA	62530488	62513673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_62514558_62529976
Isoform_1831_13	chr10	-	3528	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	5	1	5	-1	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGTCTGAGCTTGAAC	NA	False	NA	-2	True	AATAAA	-18	NA	92558277	92520608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
Isoform_18310_14	chr14	-	3707	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_18314_6	chr14	-	3672	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998582	62930457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
Isoform_18319_34	chr14	-	1832	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	-49	1265	-49	-1262	multi-exon	FALSE	canonical	3	727	junction_5	64.1242283904194	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGCAACTGGTCCT	2833	False	NA	-46	True	AATAGA	-1	NA	63402423	63383863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
Isoform_18321_756	chr14	-	1662	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-64	1262	-60	-1262	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGCAACTGGTCCT	4247	False	NA	-46	True	AATAGA	-1	NA	63415306	63383863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
Isoform_18323_25	chr14	-	1717	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-119	1262	-115	-1262	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGCAACTGGTCCT	4192	False	NA	-46	True	AATAGA	-1	NA	63415361	63383863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
Isoform_18324_8	chr14	-	3393	7	FSM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	-9	-10	-9	10	multi-exon	FALSE	canonical	2	8	junction_5	3.67045259092421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTAACGGGCCTGGT	NA	False	NA	NA	False	AATAAA	-29	NA	63482706	63436360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
Isoform_18325_11	chr14	-	3446	7	FSM	ENSMUSG00000021944.16	ENSMUST00000067417.10	3400	7	-40	-6	-40	6	multi-exon	FALSE	canonical	2	7	junction_5	3.90156663690654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTTTTCTAACGGGCC	NA	False	NA	NA	False	AATAAA	-25	NA	63482760	63436364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442208_63477984_63479095_63482599
Isoform_1833_17	chr10	-	3477	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	51	6	-6	-6	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAGACAGTCTGAGCT	NA	False	NA	-7	True	AATAAA	-13	NA	92558231	92520613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
Isoform_18338_82	chr14	-	2460	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	324	-903	-12	903	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAACCAAAAAT	NA	False	NA	-27	True	NA	NA	NA	63746217	63728892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_18339_1862	chr14	-	1446	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	324	111	-12	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_18345_535	chr14	-	1556	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	324	1	-12	-1	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTTTTACTTAGGAT	NA	False	NA	-17	True	ATTAAA	-17	NA	63746217	63729796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_18346_164	chr14	-	1662	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	218	1	-118	-1	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTTTTACTTAGGAT	NA	False	NA	-17	True	ATTAAA	-17	NA	63746323	63729796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_18347_63	chr14	-	1609	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	161	111	161	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746380	63729906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
Isoform_1836_4	chr10	-	314	2	ISM	ENSMUSG00000019988.8	ENSMUST00000216086.2	391	4	13	8102	13	-8102	5prime_fragment	FALSE	canonical	3	164	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAACAAAACAAAAAA	NA	False	NA	NA	False	CATAAA	-31	NA	92558253	92555246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_92555492_92558184
Isoform_18361_42	chr14	-	2407	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	23	140	23	-140	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAGTTTTGGACTAAC	NA	False	NA	-50	True	TATAAA	-16	NA	63781408	63761065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18363_4	chr14	-	2558	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	14	-2	14	2	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTGTGCCCTAGATA	NA	False	NA	92	True	GATAAA	-18	NA	63781417	63760923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18364_7	chr14	-	5402	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	56	-2888	56	-938	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63781375	63758037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18365_3	chr14	-	6372	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	24	-3826	24	0	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781407	63757099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18366_3	chr14	-	5455	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	0	-2885	0	-941	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTCATAATCTA	NA	False	NA	-16	True	AATAAA	-14	NA	63781431	63758040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18367_3	chr14	-	4285	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	14	-1729	14	1729	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTGGGTCAGTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	63781417	63759196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
Isoform_18368_37	chr14	-	1336	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14988	0	2	0	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	NA	False	NA	-4	True	AATAAA	-20	NA	64678364	64360073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
Isoform_1837_3	chr10	-	2295	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	1	1916	1	-7	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATGTTCCAAAGTGC	NA	False	NA	NA	False	AATAAA	-10	NA	93146996	93085191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
Isoform_18370_6	chr14	-	3414	11	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	11.4873843846195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7663	False	NA	NA	False	AATAAA	-13	NA	65187321	65049049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_65050869_65054465_65054586_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_18372_4	chr14	-	2432	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-31	995	-10	-995	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGTATTTGTATTTT	7654	False	NA	NA	False	ATTAAA	-18	NA	65187330	65050043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_18373_17	chr14	-	3400	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-6	2	0	-2	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGCTGTCCGGGATTT	7679	False	NA	NA	False	AATAAA	-12	NA	65187305	65049050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
Isoform_18375_20	chr14	-	5979	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-5	3	-5	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335560	65289511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
Isoform_18376_13	chr14	-	5941	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65387338	65289514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
Isoform_18377_3	chr14	-	5842	6	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	33	-2	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTGGAGGTGTTT	NA	False	NA	-5	True	NA	NA	NA	65335521	65289513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
Isoform_18378_18	chr14	-	2849	3	ISM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	12	23475	11	2215	5prime_fragment	FALSE	canonical	3	124	junction_2	10.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCCGCCTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	65335543	65312983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_65315639_65317828_65317925_65335445
Isoform_18379_5	chr14	-	4150	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	10	8574	10	-8574	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	65499902	65438471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
Isoform_18380_7	chr14	-	2830	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	17	9887	17	7383	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATTTCTATGCAAGGT	NA	False	NA	NA	False	AATAAA	-19	NA	65499895	65439784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
Isoform_18383_441	chr14	-	2821	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	27	3	2	-3	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTCGTCGTGTGGTGC	3471	False	NA	NA	False	AATAAA	-13	NA	65830497	65767900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
Isoform_18384_129	chr14	-	2764	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	4	3	2	-3	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTCGTCGTGTGGTGC	3471	False	NA	NA	False	AATAAA	-13	NA	65830497	65767900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
Isoform_18385_289	chr14	-	2838	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	75	0	-11	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6419	False	NA	-11	True	ATTAAA	-14	NA	66071368	66056486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_18388_22	chr14	-	2888	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	25	0	25	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6369	False	NA	-11	True	ATTAAA	-14	NA	66071418	66056486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
Isoform_1839_276	chr10	-	439	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	55	367	55	-367	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTGACTTGTGGACTAT	NA	False	NA	-8	True	AATAAA	-21	NA	93425513	93419257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
Isoform_18396_6	chr14	-	2271	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	-14	6	-14	-6	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATATCTTTTTGCCCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	66246670	66224240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
Isoform_18397_338	chr14	-	2037	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	2	-4	2	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_18398_14	chr14	-	2098	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-62	-1	-62	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTTGTGTTCTTGA	NA	False	NA	-4	True	AATAAA	-17	NA	66362011	66321824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_18401_5	chr14	-	2117	19	NNC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	48.1696141607452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361703
Isoform_18402_8	chr14	-	1914	18	NIC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	51.6540930490481	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66361947	66321821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66345425_66345617_66347564_66347725_66354159_66354245_66361783
Isoform_18404_3	chr14	-	2803	21	ISM	ENSMUSG00000059456.14	ENSMUST00000178730.8	3863	30	37833	14	-5437	-5	3prime_fragment	FALSE	canonical	2	7	junction_12	3.25729949498047	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTGGTTAGCTTG	NA	False	NA	-14	True	ATTAAA	-11	NA	66413168	66390720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072
Isoform_18405_27	chr14	-	3204	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	28	6	7	-6	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGCCTGTCCATATAT	NA	False	NA	-18	True	ATTAAA	-10	NA	67246298	67222693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
Isoform_18407_115	chr14	-	1293	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	27	1918	6	116	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCTCCAGAGCCGCTC	NA	False	NA	-10	True	AATAAA	-11	NA	67246299	67224605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
Isoform_18411_70	chr14	-	2406	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-10	1614	-10	4	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGTTTTCTTTTTCT	NA	False	NA	-1	True	AATAAA	-17	NA	67309903	67253118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
Isoform_18413_15	chr14	-	3384	11	NNC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	222.351883284131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAATTTGTATTTAAA	NA	False	NA	-6	True	AATAAA	-23	NA	67309903	67252120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538_67309807_67309826
Isoform_18414_3	chr14	-	3604	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCCTTCCAGATTGTTC	NA	False	NA	-37	True	ATTAAA	-13	NA	67952828	67913806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_18418_6	chr14	-	3649	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	211	-19	-24	-5	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGGTCACAGGTAATCTGA	NA	False	NA	-15	True	ATTAAA	-35	NA	67952848	67913784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_18419_6	chr14	-	3368	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	211	262	-24	-262	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTCTGCAGTTTTAT	NA	False	NA	86	True	NA	NA	NA	67952848	67914065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_18421_4	chr14	-	3292	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-23	-307	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCCTTTGTTTTGTT	NA	False	NA	41	True	AATATA	-15	NA	67953082	67914110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
Isoform_18422_4	chr14	-	3582	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCCAGATTGTTCAAAT	NA	False	NA	-33	True	ATTAAA	-17	NA	67953064	67913802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
Isoform_18427_11	chr14	-	1803	13	ISM	ENSMUSG00000048922.19	ENSMUST00000132705.8	2034	14	202	13324	-33	508	5prime_fragment	FALSE	canonical	3	294	junction_1	37.2449661028172	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATGCTTTTCACATTT	NA	False	NA	NA	False	AAAAAG	-35	NA	67952857	67931073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_18428_3	chr14	-	2433	8	FSM	ENSMUSG00000048922.19	ENSMUST00000155312.2	2419	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	296	junction_7	40.1842694372323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAATGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	67952838	67936384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
Isoform_18429_3	chr14	-	4298	35	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-52706	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	17.7809868907687	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGTCTACTGTCTCCT	NA	False	NA	-5	True	NA	NA	NA	68055114	67993424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044711_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961
Isoform_18430_3	chr14	-	6642	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-139	3485	-129	-1	multi-exon	TRUE	canonical	3	67	junction_21	9.78869405661972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAGAGTGAATTTTATT	NA	False	NA	0	True	NA	NA	NA	68171020	67993068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
Isoform_18431_3	chr14	-	2316	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-103	-1	42	1	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTCTCTTTTC	584	False	NA	-7	True	NA	NA	NA	69522519	69481623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
Isoform_18432_3	chr14	-	2118	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-103	197	42	-197	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTGTTTTGTTTTTTT	584	False	NA	NA	False	TATAAA	-22	NA	69522519	69481821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
Isoform_18434_8	chr14	-	4130	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	42	2	42	1	multi-exon	FALSE	canonical	3	26	junction_2	79.79974937304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTGTGGGGTCTTTGT	584	False	NA	-6	True	AATAAA	-14	NA	69522519	69479298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
Isoform_18436_11	chr14	-	2005	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	-43	-4	17	3	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69944985	69934752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
Isoform_18438_21	chr14	-	1728	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	1	-3	1	3	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69945032	69934752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
Isoform_18439_26	chr14	-	1681	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	48	-3	17	3	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69944985	69934752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
Isoform_18440_5	chr14	-	2632	6	NIC	ENSMUSG00000034194.19	novel	1958	7	NA	NA	311	3	intron_retention	FALSE	canonical	3	174	junction_2	18.8997354478839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69944631	69934752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
Isoform_18441_791	chr14	-	2656	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-7	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969990	69954448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_18442_45	chr14	-	2714	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-65	0	-58	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69970048	69954448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_18446_10	chr14	-	2925	9	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	245	junction_6	15.4495145554804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69970009	69954448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
Isoform_18448_10	chr14	-	3131	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-19	2210	-19	-2210	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTCGGGCTTGTCTGT	NA	False	NA	NA	False	AATAGA	-22	NA	70043104	70024648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
Isoform_1845_36	chr10	-	1952	11	NIC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_10	575.406508479006	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATACATTTTAATGTG	NA	False	NA	-16	True	AATAAA	-16	NA	93725646	93696789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722961_93725399
Isoform_18451_293	chr14	-	3612	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	105	8	105	-8	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACCAAGTGTGAGT	NA	False	NA	36	True	AATAAA	-10	NA	70391155	70375624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
Isoform_18452_27	chr14	-	3743	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	-26	8	-26	-8	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACCAAGTGTGAGT	NA	False	NA	36	True	AATAAA	-10	NA	70391286	70375624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
Isoform_18455_3	chr14	-	1918	7	FSM	ENSMUSG00000044551.14	ENSMUST00000058240.14	1986	7	67	1	67	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.76887462097269	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGACTGTTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	70396884	70391854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70392726_70393298_70393406_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
Isoform_18456_4	chr14	-	1925	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12378	-464	12378	0	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCTGCTTCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	70429694	70417916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
Isoform_18457_4	chr14	-	2048	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	-45	-33	-45	0	multi-exon	TRUE	canonical	2	11	junction_1	4.03827838412513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTTGTCCTAATTTTA	9141	False	NA	NA	False	NA	NA	NA	70526965	70455313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
Isoform_18458_4	chr14	-	1969	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	29	-28	8	-5	multi-exon	FALSE	canonical	2	11	junction_1	4.03827838412513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTCCCCTTGTCCTAA	9215	False	NA	NA	False	NA	NA	NA	70526891	70455318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
Isoform_18460_14	chr14	-	4837	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGTGTCTGAGAGAA	NA	False	NA	-18	True	AATAAA	-14	NA	70666847	70609929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
Isoform_18462_17	chr14	-	1983	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	87	-38	87	-1	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGTAAGTGGTTCTGC	1975	False	NA	-8	True	AATAAA	-16	NA	70680643	70676197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
Isoform_18463_49	chr14	-	2062	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-24	-22	-24	22	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTACTTTTGTGACTC	1707	False	NA	15	True	AATAAA	-39	NA	70680911	70676174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
Isoform_18469_84	chr14	-	2748	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTATTGTTTCTATCC	NA	False	NA	-4	True	ATTAAA	-18	NA	70864497	70841113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18470_12	chr14	-	2857	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-111	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864605	70841112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18473_5	chr14	-	2826	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCAGTTGTCTTACCTC	NA	False	NA	47	True	NA	NA	NA	70864524	70841062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18474_4	chr14	-	2561	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.0381820064992	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70873389	70841111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
Isoform_18475_13	chr14	-	2676	14	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	73.4809881622571	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864498	70841111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70864178
Isoform_18476_3	chr14	-	2519	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	162	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	54.765773443168	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864332	70841111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842489_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18477_10	chr14	-	2692	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864497	70841111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18478_3	chr14	-	3184	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-4	0	intron_retention	FALSE	canonical	2	74	junction_2	38.011209807186	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864498	70841112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_70842295_70842407_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
Isoform_18479_21	chr14	-	1552	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	89	-305	89	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879605	70873643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_1848_407	chr10	-	1972	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	21	2431	-9	8	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAATGTGTATGGTTG	NA	False	NA	-8	True	AATAAA	-24	NA	93725655	93696781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
Isoform_18480_18	chr14	-	1663	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-22	-305	-8	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879716	70873643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_18483_12	chr14	-	1386	6	NNC	ENSMUSG00000022101.7	novel	1336	5	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.6541286172528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879757	70873643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162_70879267_70879584
Isoform_18487_18	chr14	-	1736	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	-48	1	-48	-1	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879756	70873643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
Isoform_18489_4	chr14	-	1420	6	NNC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.9616360042465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGTCCGCTGAAGAAAG	NA	False	NA	-1	True	AATAAA	-15	NA	70879757	70873643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_70874464_70875906_70876014_70876241_70876421_70878971_70879009_70879162_70879267_70879584
Isoform_18490_5	chr14	-	1103	4	ISM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-63	1739	-49	-1739	5prime_fragment	FALSE	canonical	3	35	junction_2	11.4309521329882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATATGAGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	70879757	70875687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_70876014_70876241_70876387_70878971_70879009_70879162
Isoform_18492_4	chr14	-	1134	4	NNC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-49	-1742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.0102861065105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTATATGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	70879757	70875690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_70876014_70876241_70876421_70878971_70879009_70879162
Isoform_18493_5	chr14	-	981	4	ISM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	103	2048	89	-1742	5prime_fragment	FALSE	canonical	3	21	junction_2	17.4610678049451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTATATGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	70879605	70875690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_70876014_70876241_70876420_70878971_70879009_70879162
Isoform_18494_5	chr14	-	3526	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-28	602	-28	-602	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTGTCATGTACTAAAA	7117	False	NA	0	True	AATATA	-29	NA	72840430	72777571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
Isoform_18495_26	chr14	-	1090	6	ISM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-5	46629	-5	-10009	5prime_fragment	FALSE	canonical	3	104	junction_5	24.3688325530789	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTCTGGACATGAGTGT	NA	False	NA	NA	False	NA	NA	NA	72947448	72822014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
Isoform_18497_108	chr14	-	1786	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	3	7	3	-7	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGATTTCTTGTGGATG	NA	False	NA	NA	False	AATAAA	-19	NA	73622726	73599672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
Isoform_18499_109	chr14	-	1594	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	17	185	17	-185	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGAGACTGTGCGTTG	NA	False	NA	-7	True	TATAAA	-14	NA	73622712	73599850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
Isoform_18511_24	chr14	-	3165	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23005	8	-26	-8	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTAATGATCTCAGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	73762677	73756324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_73759115_73760737_73760935_73762499
Isoform_18512_7	chr14	-	3251	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	19	1424	19	28	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGAAGTTTTTTTT	598	False	NA	NA	False	ATTAAA	-9	NA	75185287	74993538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_18513_3	chr14	-	4673	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	21	0	21	0	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	600	False	NA	-1	True	ATTAAA	-20	NA	75185285	74992114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_18514_10	chr14	-	3180	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	29	-84	19	38	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTTTTTCTGGATT	598	False	NA	NA	False	ATTAAA	-19	NA	75185287	74993528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
Isoform_18515_45	chr14	-	4299	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	-12	-19	-12	-1	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75992010	75939790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
Isoform_18517_5	chr14	-	4255	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	22.2812599611096	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991998	75939791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
Isoform_18518_18	chr14	-	3556	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	32	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	76024445	75997556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
Isoform_18521_103	chr14	-	1063	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-30	434	-30	-434	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGATGTTATTTATA	NA	False	NA	-5	True	CATAAA	-22	NA	76248335	76134810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
Isoform_18522_87	chr14	-	1503	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-30	-6	-30	6	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACTGTTATCACTGGC	NA	False	NA	-11	True	AATAAA	-25	NA	76248335	76134370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
Isoform_18529_3	chr14	-	2956	7	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-59	7699	-59	-7699	5prime_fragment	FALSE	canonical	3	468	junction_5	39.2063628622815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	76248364	76142075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
Isoform_18532_5	chr14	-	5456	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-66	-1	-66	1	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGAATCTTCCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	76348266	76323674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
Isoform_18534_12	chr14	-	1236	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-66	4219	-66	-4219	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTGCACAAATACGTC	NA	False	NA	-16	True	AATATA	-16	NA	76348266	76327894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
Isoform_18537_47	chr14	-	635	2	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	16752	-3	16386	1	3prime_fragment	FALSE	canonical	3	106	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATGTGCGAGTTACCG	NA	False	NA	-1	True	AATAAA	-19	NA	76777546	76770252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_76770687_76777345
Isoform_18538_24	chr14	-	2421	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	21	2	21	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274060	77261641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
Isoform_18539_4	chr14	-	2708	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	-264	0	-1	0	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTATCCATTCCTTT	NA	False	NA	1	True	NA	NA	NA	77274345	77261639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
Isoform_18540_3	chr14	-	2539	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	0	True	NA	NA	NA	77274356	77261640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
Isoform_18541_10	chr14	-	2261	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	0	True	NA	NA	NA	77274078	77261640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
Isoform_18543_232	chr14	-	662	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	0	5531	0	3	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGCTTTTCCACATCA	NA	False	NA	-4	True	NA	NA	NA	78112366	78063651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
Isoform_18545_7	chr14	-	883	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	-221	5531	-22	3	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGCTTTTCCACATCA	NA	False	NA	-4	True	NA	NA	NA	78112587	78063651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
Isoform_18547_3	chr14	-	581	5	FSM	ENSMUSG00000022013.5	ENSMUST00000022590.5	674	5	191	-98	-8	-34	multi-exon	FALSE	canonical	3	15	junction_4	265.32856989024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGGTCTGGCAGGG	NA	False	NA	-41	True	AATAAA	-15	NA	78112374	78063688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78112237
Isoform_18548_10	chr14	-	4433	7	ISM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-52	18468	-52	-14840	5prime_fragment	FALSE	canonical	3	71	junction_2	3.39934634239519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAGAAATGGCAGCC	NA	False	NA	NA	False	AGTAAA	-27	NA	78774300	78748153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
Isoform_18552_73	chr14	-	907	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	15	-4	15	4	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGAAAGCTGCCTTAT	NA	False	NA	-7	True	AATAAA	-18	NA	79539070	79526191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
Isoform_18553_3	chr14	-	3975	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	7	9241	7	-306	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628211	79571949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_18554_5	chr14	-	2761	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	101	10361	13	6	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	79628117	79573069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_18555_4	chr14	-	2846	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	13	10364	13	3	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGTTTTTTGTTTGTTTG	NA	False	NA	-7	True	AATAAA	-14	NA	79628205	79573072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
Isoform_18559_14	chr14	-	2231	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	470	1003	-88	10	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAATATCGGGGTCTCT	NA	False	NA	NA	False	ATTAAA	-8	NA	79718490	79698379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_18560_17	chr14	-	1418	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	475	1811	-83	-96	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTTTGTTCCTTAA	NA	False	NA	-5	True	AATAAA	-16	NA	79718485	79699187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
Isoform_18567_33	chr14	-	4552	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	30	0	-24	0	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87378630	86892802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
Isoform_18568_8	chr14	-	4622	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-39	-1	-28	1	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGTATGTCTCTTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	87378699	86892801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
Isoform_18577_40	chr14	-	2263	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-26	3	-12	-3	multi-exon	FALSE	canonical	3	792	junction_1	24.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	99283582	99271982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99273947_99277950_99278097_99283429
Isoform_18578_245	chr14	-	2233	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	9	-2	9	2	multi-exon	FALSE	canonical	3	792	junction_1	24.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCTTTTGATATACTG	NA	False	NA	NA	False	AATAAA	-20	NA	99283547	99271977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99273947_99277950_99278097_99283429
Isoform_18584_7	chr14	-	3147	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	122.265648850725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCATTTTTATTGAGT	2528	False	NA	-17	True	AATACA	-18	NA	99337205	99314711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
Isoform_18585_151	chr14	-	3035	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	42	2073	12	-9	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2569	False	NA	-20	True	AATACA	-15	NA	99337164	99314714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_18586_4	chr14	-	3300	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	27	1823	-3	187	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAGCCTTTCTAAAT	2554	False	NA	NA	False	AAAACA	-39	NA	99337179	99314464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_18588_3	chr14	-	5079	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	57	14	27	-14	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAACCAGCA	2584	False	NA	NA	False	NA	NA	NA	99337149	99312655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_1859_4	chr10	-	2453	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-51	2077	2	1139	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTTGATTGTTCTTTT	3413	False	NA	-2	True	AATAAA	-16	NA	93871661	93806038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_18591_12	chr14	-	727	4	ISM	ENSMUSG00000033166.12	ENSMUST00000228643.2	2971	20	-10	19491	-10	926	5prime_fragment	FALSE	canonical	3	415	junction_3	11.1455023315337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATGTTTCAGCATGA	2547	False	NA	NA	False	NA	NA	NA	99337186	99334196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_99334267_99335020_99335215_99336118_99336277_99336881
Isoform_18593_4	chr14	-	2972	12	FSM	ENSMUSG00000033083.17	ENSMUST00000160297.8	3103	12	-282	413	77	-11	multi-exon	FALSE	canonical	3	15	junction_8	4.82418151324422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTTGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101846550	101700420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_18594_34	chr14	-	2683	12	FSM	ENSMUSG00000033083.17	ENSMUST00000160297.8	3103	12	7	413	7	-11	multi-exon	FALSE	canonical	3	15	junction_8	4.82418151324422	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTTGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101846261	101700420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_18595_3	chr14	-	2962	6	NNC	ENSMUSG00000033083.17	novel	674	2	NA	NA	-14	11537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0915806492343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGAAGCATTTTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	101846282	101730605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_101730795_101730823_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
Isoform_18597_33	chr14	-	843	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	241	6	3	-6	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTTTATGACGTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	101877881	101871207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
Isoform_18598_5	chr14	-	1634	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	241	-785	3	0	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTGGTGAGCTGACA	NA	False	NA	0	True	NA	NA	NA	101877881	101870416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
Isoform_18599_3	chr14	-	517	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	12	-10	3	10	multi-exon	FALSE	canonical	3	50	junction_2	193.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAAAAGAGAATTTCAC	NA	False	NA	-13	True	AATAAA	-3	NA	101877881	101871521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_101871829_101874389_101874543_101877824
Isoform_186_4	SIRV10003	+	4759	1	FSM	SIRV10003A	SIRV10003	9970	1	0	5211	0	-5211	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTATTTTGAAAACT	NA	False	NA	NA	False	NA	NA	NA	0	4759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10003_+_0_4800
Isoform_1860_6	chr10	-	2921	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-29	1587	0	-1587	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTGCTGGGGTTT	3435	False	NA	-1	True	AATAAA	-18	NA	93871639	93805548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_18600_37	chr14	-	3355	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-4	1	-4	-1	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9918	False	NA	-5	True	AATAAA	-12	NA	103336439	103318470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
Isoform_18602_6	chr14	-	3422	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-71	1	-71	-1	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9851	False	NA	-5	True	AATAAA	-12	NA	103336506	103318470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
Isoform_18603_17	chr14	-	3530	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-12	791	0	4	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTTATAACTTTA	9801	False	NA	0	True	AATAAA	-17	NA	103337002	103318465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
Isoform_18604_3	chr14	-	3333	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGTATTTTTATAACT	9801	False	NA	-3	True	AATAAA	-14	NA	103337002	103318468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
Isoform_18605_20	chr14	-	3212	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-29	-649	-5	-1	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9917	False	NA	-5	True	AATAAA	-12	NA	103336440	103318470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
Isoform_18606_8	chr14	-	3353	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTTGTATTTTTATAA	9829	False	NA	-5	True	AATAAA	-12	NA	103336974	103318470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
Isoform_18607_25	chr14	-	632	2	ISM	ENSMUSG00000033004.17	ENSMUST00000162537.2	3495	3	4	12014	4	-12014	5prime_fragment	FALSE	canonical	3	11	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAAAAGCAAATCAAA	NA	False	NA	NA	False	AAGAAA	-28	NA	103584246	103561144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_103561182_103583651
Isoform_18608_26	chr14	-	3449	7	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-42	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.5333976833377	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTTTGATGTCATCA	NA	False	NA	-2	True	AATAAA	-17	NA	104760123	104714972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_104715596_104715620_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
Isoform_1861_5	chr10	-	2947	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	24	8167	8	-1589	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGATGTGTGCTGGGGT	3419	False	NA	-3	True	AATAAA	-16	NA	93871655	93805550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_18613_5	chr14	-	4099	21	FSM	ENSMUSG00000091509.8_ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	1	-466	1	445	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	105414758	105351955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_18614_5	chr14	-	2623	15	ISM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	35	16497	-24	-15348	5prime_fragment	FALSE	canonical	3	161	junction_5	20.0265130387144	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAATAGTAAAATTAAAT	NA	False	NA	NA	False	AAAAAG	-41	NA	105414724	105368918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
Isoform_18617_20	chr14	-	2387	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-306	6	-306	-6	multi-exon	FALSE	canonical	3	119	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGCTGAGCTTGTTTT	NA	False	NA	-10	True	TATAAA	-24	NA	106134559	106129386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_106131236_106134021
Isoform_1862_3	chr10	-	2660	10	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	-1	-1587	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	17.3717522943938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTGCTGGGGTTT	3410	False	NA	-1	True	AATAAA	-18	NA	93871664	93805548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
Isoform_18620_13	chr14	-	5606	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	27	82	27	-82	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTATTTCATTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	118943590	118720185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18621_21	chr14	-	5262	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	27	426	27	-426	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTGTGTGTATATA	NA	False	NA	-1	True	AATAAA	-15	NA	118943590	118720529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18622_5	chr14	-	5689	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	27	-1	27	1	multi-exon	TRUE	canonical	3	201	junction_24	29.291276668812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGATCTGTTTGTTCG	NA	False	NA	-7	True	AATAAA	-19	NA	118943590	118720102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18623_5	chr14	-	5991	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-276	0	-262	0	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943893	118720103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18624_11	chr14	-	5537	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-251	429	-237	-429	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATGTGTGTGTGTAT	NA	False	NA	-4	True	AATAAA	-12	NA	118943868	118720532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18625_9	chr14	-	3304	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	3	45066	3	0	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTCATGTATGCT	NA	False	NA	NA	False	AATAAA	-15	NA	118943614	118765169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18626_3	chr14	-	3594	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-294	45073	-280	-7	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTTCTCTGTCTCAT	NA	False	NA	NA	False	AATAAA	-8	NA	118943911	118765176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
Isoform_18627_3	chr14	-	4362	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-10	1	combination_of_known_junctions	TRUE	canonical	3	9	junction_20	9.99721035469561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGACTGTGGCTGCTTA	NA	False	NA	-5	True	AGTAAA	-15	NA	119162882	119113668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
Isoform_18628_3	chr14	-	3464	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	-83	698	-10	-576	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTCTAGTGTTAAATG	NA	False	NA	NA	False	CATAAA	-20	NA	119162882	119114367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
Isoform_18629_6	chr14	-	3360	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	22	697	22	-575	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTAGTGTTAAATGT	NA	False	NA	NA	False	CATAAA	-21	NA	119162777	119114366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
Isoform_1863_3	chr10	-	3884	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	-5	2687	-5	-2687	multi-exon	FALSE	canonical	3	9	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCACATATCTCCATT	NA	False	NA	-11	True	AATAAA	-17	NA	94524443	94509573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_94512992_94514192_94514310_94524094
Isoform_18633_219	chr14	-	2593	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	86	-3	-47	3	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCATACTATTCTTG	7389	False	NA	-8	True	AATAAA	-15	NA	121616660	121523751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_18634_86	chr14	-	2636	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	45	-5	45	5	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATACTATTCTTGAA	7348	False	NA	-6	True	AATAAA	-17	NA	121616701	121523749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_18635_72	chr14	-	4745	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	85	-2154	-48	2154	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGTCTCGTGTTGTG	7388	False	NA	-10	True	AATAAA	-15	NA	121616661	121521600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_18639_45	chr14	-	4779	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	52	-2155	52	2155	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCTCGTGTTGTGG	7355	False	NA	-9	True	AATAAA	-16	NA	121616694	121521599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
Isoform_18642_7	chr14	-	3332	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-210	-1	-210	1	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGTGTTTGTGTGTC	2928	False	NA	-5	True	AATAAA	-13	NA	121742874	121697031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_18644_21	chr14	-	3173	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-48	-4	-48	4	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTGTGTCTTT	3090	False	NA	-2	True	AATAAA	-16	NA	121742712	121697028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_18645_12	chr14	-	3306	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-181	-4	-181	4	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTGTGTCTTT	2957	False	NA	-2	True	AATAAA	-16	NA	121742845	121697028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
Isoform_18646_9	chr14	-	1985	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1469	1313	1469	1085	multi-exon	FALSE	canonical	3	83	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAGACAAAAAAA	NA	False	NA	NA	False	TTTAAA	-8	NA	122701620	122695519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_122697188_122701303
Isoform_18647_4	chr14	-	2080	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1374	1313	1374	1085	multi-exon	FALSE	canonical	3	83	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAGACAAAAAAA	NA	False	NA	NA	False	TTTAAA	-8	NA	122701715	122695519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_122697188_122701303
Isoform_18649_5	chr14	-	1259	3	FSM	ENSMUSG00000041625.16	ENSMUST00000162164.2	609	3	-26	-624	9	-2	multi-exon	TRUE	canonical	3	7	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTTGGTCCTTCTTT	NA	False	NA	-4	True	ATTAAA	-27	NA	123150523	123128273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_123129229_123137887_123137945_123150276
Isoform_1865_3	chr10	-	1230	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-116	1	6	-1	multi-exon	FALSE	canonical	3	30	junction_2	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTCTTTCAATGAGA	NA	False	NA	1	True	AATAAA	-21	NA	95159543	95011127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_18650_18	chr14	-	1071	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	-7	12	-7	-1	multi-exon	FALSE	canonical	3	34	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGCTGTTGCTGTTTG	NA	False	NA	-14	True	ATTAAA	-17	NA	123150581	123128283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_123129229_123137887_123137945_123150512
Isoform_18651_15	chr14	-	2608	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_13	34.630726201335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAACCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	123220678	123157170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_18652_8	chr14	-	3362	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_13	34.630726201335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220650	123156388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_18653_74	chr14	-	2616	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	34	766	-9	-6	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTAAACAGAAAAAAAT	NA	False	NA	NA	False	AAAAAG	-14	NA	123220661	123157148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_18654_12	chr14	-	2637	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	12	767	4	-7	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACTAAACAGAAAAAAA	NA	False	NA	NA	False	AAAAAG	-13	NA	123220683	123157149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_18655_38	chr14	-	3378	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	34	4	-9	3	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220661	123156386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
Isoform_18656_9	chr14	-	2521	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	38.2839509410142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTAAACAGAAAAAAAT	NA	False	NA	NA	False	AAAAAG	-14	NA	123220660	123157148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
Isoform_18657_5	chr14	-	3290	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-14	-3	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	38.2839509410142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTTGGTTTCTTTT	NA	False	NA	1	True	AGTAAA	-23	NA	123220666	123156385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
Isoform_18658_9	chr14	-	3389	13	NNC	ENSMUSG00000059674.8	novel	3489	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.9537935951883	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGAGCCCGCTTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	54878813	54868689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_54868991_54869080_54870070_54870503_54870753_54870915_54871028_54871106_54871229_54873789_54873927_54874777_54875032_54875460_54875649_54875783_54875952_54876024_54876145_54876327_54876623_54876800_54877119_54878677
Isoform_18659_4	chr14	-	1766	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-25	636	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.7296808576838	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127758	58072512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_1866_14	chr10	-	1137	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-25	3	-25	-3	multi-exon	FALSE	canonical	3	30	junction_2	28	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGCCTCTTTCAATGA	NA	False	NA	-1	True	AATAAA	-19	NA	95159452	95011129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95011841_95158447_95158752_95159330
Isoform_18660_6	chr14	-	1695	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-25	642	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58127758	58072506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
Isoform_18663_5	chr14	-	605	3	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	43	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTAGCTCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	73431988	73424810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_73425028_73425702_73425852_73431749
Isoform_18664_3	chr14	-	587	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAATACTGTGTTGG	NA	False	NA	NA	False	TTTAAA	-4	NA	75304598	75285366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_-_75285810_75304454
Isoform_18665_3	chr14	-	434	2	NNC	ENSMUSG00000115760.2	novel	965	2	NA	NA	718	104	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATCAGTGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	31877310	31876600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_31876977_31877252
Isoform_18667_6	chr14	+	1528	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	-7	2	-7	-2	multi-exon	FALSE	canonical	3	139	junction_1	30.1569229199532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTGTACCAGCCT	NA	False	NA	5	True	AATAAA	-17	NA	3575912	3896117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_18668_36	chr14	+	1444	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	77	2	-6	-2	multi-exon	FALSE	canonical	3	139	junction_1	30.1569229199532	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTGTACCAGCCT	NA	False	NA	5	True	AATAAA	-17	NA	3575996	3896117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_18669_3	chr14	+	1304	5	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	75.1743806093539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3576002	3896116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_3576112_3581246_3581431_3598151_3598203_3882697_3882846_3895304
Isoform_1867_15	chr10	-	1127	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	13	521	13	-2	multi-exon	FALSE	canonical	3	29	junction_2	28.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCCTCTTTCAATGAG	NA	False	NA	0	True	AATAAA	-20	NA	95159957	95011128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95011841_95158447_95158752_95159846
Isoform_18670_5	chr14	+	1383	5	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	75.1182401284801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCCCTTCTGTACCAG	NA	False	NA	2	True	AATAAA	-14	NA	3576003	3896114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_3576112_3581246_3581431_3839264_3839398_3882697_3882846_3895304
Isoform_18671_5	chr14	+	1528	6	NIC	ENSMUSG00000058317.13	novel	757	6	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	66.9674547821552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTGTACCAGCCT	NA	False	NA	5	True	AATAAA	-17	NA	3576269	3896117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_3576469_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
Isoform_18673_136	chr14	+	1363	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	39	6	39	-6	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGACCCTGCTGTGTT	NA	False	NA	18	True	AATAAA	-15	NA	4137875	4186968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
Isoform_18674_50	chr14	+	1402	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	0	6	0	-6	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGACCCTGCTGTGTT	NA	False	NA	18	True	AATAAA	-15	NA	4137836	4186968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
Isoform_18678_256	chr14	+	1826	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	84	12	-13	-12	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGTGGACCTATGTT	NA	False	NA	NA	False	AATAAA	-6	NA	4198712	4201861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_18679_5016	chr14	+	700	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	85	1137	-12	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	5016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198713	4200736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_1868_4	chr10	-	1693	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	-31	-1	-6	1	multi-exon	FALSE	canonical	3	29	junction_2	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCGTGTCCATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	95160001	95010606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95011841_95158447_95158752_95159846
Isoform_18681_278	chr14	+	739	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	46	1137	8	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198674	4200736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
Isoform_18688_306	chr14	+	804	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198723	4200736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
Isoform_1869_22	chr10	-	1156	3	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	34	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTCTTTCAATGAGA	NA	False	NA	1	True	AATAAA	-21	NA	95160001	95011127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95011841_95158447_95158752_95159862
Isoform_18691_628	chr14	+	821	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	62	0	3	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198728	4200736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
Isoform_18699_16	chr14	+	4656	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	4	3	4	-3	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGTTTTGTTCT	NA	False	NA	25	True	TATAAA	-15	NA	4230572	4265639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
Isoform_187_3	SIRV10003	+	3672	1	FSM	SIRV10003A	SIRV10003	9970	1	6298	0	6298	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	6298	9970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10003_+_6300_10000
Isoform_1870_5	chr10	-	1695	3	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	34	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCGTGTCCATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	95160019	95010606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95011841_95158447_95158752_95159862
Isoform_18700_4	chr14	+	3450	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	6	-22	6	-13	multi-exon	FALSE	canonical	3	8	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAAAGTCTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	6226437	6231098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_6226474_6226964_6227973_6228692
Isoform_18704_1543	chr14	+	1318	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	58	11	7	-11	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	1543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTAATTTTTTTTC	NA	False	NA	14	True	AATAAA	-16	NA	8348836	8357578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
Isoform_18707_9	chr14	+	949	9	FSM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	0	2	0	-2	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTGTGCTCATTCA	NA	False	NA	18	True	AATAAA	-12	NA	8508547	8520747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18708_6	chr14	+	1021	9	NIC	ENSMUSG00000053453.10	novel	844	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTTTGTGCTCATTCAA	NA	False	NA	19	True	AATAAA	-13	NA	8508550	8520748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18710_3	chr14	+	1117	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	272.312292001298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTGTGCTCATTCA	NA	False	NA	18	True	AATAAA	-12	NA	8508473	8520747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18711_11	chr14	+	1045	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	272.312292001298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508547	8520749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18712_6	chr14	+	890	8	NIC	ENSMUSG00000053453.10	novel	937	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	208	junction_2	184.198207352397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTTTGTGCTCATTCAA	NA	False	NA	19	True	AATAAA	-13	NA	8508502	8520748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18718_9	chr14	+	1085	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-148	0	-148	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508337	8520751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18719_57	chr14	+	921	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	14	2	-3	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508499	8520749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_1872_7	chr10	-	1876	6	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	1	-139	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	212.826126215744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252718	95223667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95248520_95248973_95250692_95251054_95252479
Isoform_18720_17	chr14	+	973	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-38	2	-38	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508447	8520749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18721_3	chr14	+	1010	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	124	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTTTGTGCTCATTCAA	NA	False	NA	19	True	AATAAA	-13	NA	8508726	8520748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
Isoform_18725_5	chr14	+	961	4	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-33	141567	-32	-141567	5prime_fragment	FALSE	canonical	3	157	junction_2	15.5134350376268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTACTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	13803500	13825785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303
Isoform_18726_3	chr14	+	2317	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-27	7943	-26	-7943	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAATTGGGACTCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	13803506	13959409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
Isoform_18727_5	chr14	+	2865	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-45	41398	-45	29831	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTTGTTAACATAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	13803487	13997183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
Isoform_18728_7	chr14	+	2785	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	35	41398	34	29831	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTTGTTAACATAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	13803567	13997183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
Isoform_18729_45	chr14	+	2706	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-26	1	-26	-1	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGTGCTTCCTTTTGTT	NA	False	NA	13	True	AATAAA	-13	NA	13803506	14038580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
Isoform_1873_39	chr10	-	1371	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	54	-139	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252665	95223667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
Isoform_18731_7	chr14	+	2784	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-94	-9	-94	9	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTTCACCCTGTTG	NA	False	NA	23	True	AATAAA	-23	NA	13803438	14038590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
Isoform_18736_19	chr14	+	864	5	ISM	ENSMUSG00000021748.10	ENSMUST00000224466.2	459	6	35	880	-9	-7	5prime_fragment	FALSE	canonical	3	2463	junction_1	124.760771078092	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	14296826	14299180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597
Isoform_18739_11	chr14	+	2358	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	78	-923	-10	923	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCACAGATTACATGAA	NA	False	NA	NA	False	AATAAA	-16	NA	14296825	14304700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
Isoform_1874_26	chr10	-	1424	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	1	-139	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252718	95223667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
Isoform_18740_456	chr14	+	1435	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	77	1	-11	-1	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTCTTGGAGTACTAT	NA	False	NA	NA	False	AATAAA	-15	NA	14296824	14303776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
Isoform_18744_7	chr14	+	1322	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	28	163	-16	87	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTTTGTCTGTTAC	NA	False	NA	74	True	NA	NA	NA	14296775	14303614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
Isoform_18745_6	chr14	+	2210	3	ISM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	57	-262	-6	-7	intron_retention	FALSE	canonical	3	2463	junction_1	145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	14296804	14299180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_14296883_14296955_14298351_14298443
Isoform_18747_6	chr14	+	2097	4	FSM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	79	-262	-9	-7	multi-exon	FALSE	canonical	3	2463	junction_1	144.03008944893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	14296826	14299180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597
Isoform_18751_5	chr14	+	1235	3	Fusion	ENSMUSG00000094634.9_ENSMUSG00000096629.8	novel	1955	7	NA	NA	-1	-16462	multi-exon	FALSE	canonical	0	0	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	16361106	16662755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr14_+_16361193_16362573_16362688_16661720
Isoform_18752_7	chr14	+	4353	6	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	0	24742	0	-24742	intron_retention	FALSE	canonical	3	1333	junction_3	77.0755473545274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	19801351	19831456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805
Isoform_18753_10	chr14	+	3800	7	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	0	24742	0	-24742	intron_retention	FALSE	canonical	3	1333	junction_3	98.4046351663489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	19801351	19831456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604
Isoform_18756_6	chr14	+	3972	15	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	0	2498	0	-2498	5prime_fragment	FALSE	canonical	3	1309	junction_14	114.833952882821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	19801351	19853700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116
Isoform_18757_6	chr14	+	4016	17	FSM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	-37	-3	-18	3	multi-exon	FALSE	canonical	3	1309	junction_14	123.598391979831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGACCCGCTGCTGGG	NA	False	NA	NA	False	AATAAA	-26	NA	19801314	19856201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
Isoform_18759_239	chr14	+	4857	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	19	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801351	19861855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_18760_167	chr14	+	4891	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-15	0	-15	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801317	19861855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_18763_11	chr14	+	5194	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-318	0	-318	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801014	19861855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
Isoform_18766_8	chr14	+	2437	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	-18	-35427	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGGTACAGATGTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	19801314	19820771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
Isoform_18767_18	chr14	+	2215	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	0	-35612	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGCTTTTCGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	19801351	19820586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
Isoform_18773_4	chr14	+	2849	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-74	6103	2	-5	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGCACCAGTTAAATG	NA	False	NA	2	True	NA	NA	NA	20398253	20415307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
Isoform_18775_11	chr14	+	1772	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-67	2778	3	497	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATATGTTCTTTAAT	NA	False	NA	14	True	NA	NA	NA	20398260	20418632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
Isoform_18777_10	chr14	+	2065	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	-23	6874	9	115	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTACTTGTCCATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	20398266	20426470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
Isoform_18778_4	chr14	+	2407	14	FSM	ENSMUSG00000039599.17	ENSMUST00000090499.13	2370	14	-40	3	-2	-1	multi-exon	FALSE	canonical	3	48	junction_9	83.3254828649349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTTATTACATTTT	NA	False	NA	8	True	AATAAA	-17	NA	20398249	20433556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
Isoform_18779_7	chr14	+	1628	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-10	496	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398241	20418631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
Isoform_18780_17	chr14	+	4497	24	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724405	20744917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_18781_127	chr14	+	4431	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	28	2	0	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724403	20744918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_18782_3	chr14	+	4604	23	NIC	ENSMUSG00000039367.12	novel	724	8	NA	NA	82	-1	intron_retention	FALSE	canonical	3	25	junction_1	73.2329578516564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724578	20744917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
Isoform_18784_3	chr14	+	3774	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	390	-1	381	1	multi-exon	FALSE	canonical	3	28	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTCTTTATTACATTT	NA	False	NA	NA	False	AATAAA	-24	NA	20745425	20751085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20745767_20745855_20746482_20748278
Isoform_18785_4	chr14	+	1521	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	-6	2648	-6	-1827	multi-exon	FALSE	canonical	3	28	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTGTTAACTTGGA	NA	False	NA	NA	False	AATAAA	-20	NA	20745029	20748436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20745767_20745855_20746482_20748278
Isoform_18787_39	chr14	+	570	3	FSM	ENSMUSG00000063787.5	ENSMUST00000226072.2	578	3	1	7	1	-1	multi-exon	FALSE	canonical	3	132	junction_1	962	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTTGGCCATTTCT	NA	False	NA	26	True	AATAAA	-9	NA	20753126	20754486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20753266_20753343_20753477_20754188
Isoform_18788_519	chr14	+	560	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	49	7	-3	-1	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTTGGCCATTTCT	NA	False	NA	26	True	AATAAA	-9	NA	20753122	20754486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20753266_20753357_20753477_20754188
Isoform_18789_5	chr14	+	3700	9	ISM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	16	8014	16	-6	intron_retention	FALSE	canonical	3	25	junction_2	3.90512483795333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20757635	20765673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397
Isoform_1879_24	chr10	-	2155	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	53	14	53	-14	multi-exon	FALSE	canonical	3	447	junction_2	23.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95252666	95247365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95248973_95250692_95251054_95252479
Isoform_18790_3	chr14	+	6066	26	FSM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	1	6	1	-5	multi-exon	TRUE	canonical	3	22	junction_9	13.1390106172421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTATTTTCTGGGTCTTT	NA	False	NA	11	True	TATAAA	-19	NA	20757620	20773681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
Isoform_18792_47	chr14	+	5278	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-15	4	-15	-4	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCTCTAATTGAGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	20979450	21083740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
Isoform_18793_72	chr14	+	5235	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	28	4	28	-4	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCTCTAATTGAGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	20979493	21083740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
Isoform_18796_8	chr14	+	288	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	6	-5	0	5	multi-exon	FALSE	canonical	3	60	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATCCATTTTAACAGT	NA	False	NA	9	True	AATAAA	-20	NA	21102684	21103993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21102769_21103789
Isoform_18797_13	chr14	+	946	8	NIC	ENSMUSG00000039197.11	novel	2224	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	129.691313258421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGTTCTTCCCAACT	NA	False	NA	NA	False	ATTAAA	-15	NA	21102684	21376860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
Isoform_18799_95	chr14	+	1739	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	43	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTGTCTTGCTTG	NA	False	NA	16	True	AATAAA	-19	NA	21102684	21498637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
Isoform_188_3	SIRV10003	+	1153	1	FSM	SIRV10003A	SIRV10003	9970	1	8817	0	8817	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	8817	9970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV10003_+_8800_10000
Isoform_1880_15	chr10	-	2228	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	-20	14	-20	-14	multi-exon	FALSE	canonical	3	447	junction_2	23.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95252739	95247365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95248973_95250692_95251054_95252479
Isoform_18801_8	chr14	+	1810	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	7	1	7	-1	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGGATTTTTTTTCTGT	NA	False	NA	8	True	AATAAA	-11	NA	21126226	21498629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
Isoform_18803_3	chr14	+	1876	5	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-730	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	9.33742469849155	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATAAAAGAAATATAAAG	NA	False	NA	NA	False	AATACA	-1	NA	21531501	21669943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285
Isoform_18807_6	chr14	+	2737	15	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	1	-8495	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	36.2362570712072	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGGAGGAGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	21531502	21712446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225
Isoform_18809_6	chr14	+	3543	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-2118	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAACAGGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	21531501	21718823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
Isoform_18810_3	chr14	+	3072	15	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-4	-8492	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	46.9181332161649	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGGAGGAGGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	21531497	21712449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225
Isoform_18811_4	chr14	+	2946	15	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-8614	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	46.9181332161649	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAGTACCTGCACTC	NA	False	NA	NA	False	NA	NA	NA	21531501	21712327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225
Isoform_18815_68	chr14	+	1690	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	263	1	-34	-1	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCTGCAGTTTCTAAGT	NA	False	NA	11	True	AATAAA	-21	NA	21881599	21895946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_18816_421	chr14	+	1326	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	268	360	-29	0	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881604	21895587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_18818_136	chr14	+	1503	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	268	183	-29	177	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGGCTCACGTATGTG	NA	False	NA	15	True	AATAAA	-14	NA	21881604	21895764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_18822_13	chr14	+	1559	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	34	361	32	-1	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTGTGCATGTTTGT	NA	False	NA	21	True	AATAGA	-17	NA	21881370	21895586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_18823_11	chr14	+	1530	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	238	186	-59	174	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAATGGCTCACGTAT	NA	False	NA	12	True	AATAAA	-11	NA	21881574	21895761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
Isoform_18828_44	chr14	+	2793	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-10	-14	1	1	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540786	24545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
Isoform_18832_465	chr14	+	533	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	0	-14	0	1	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
Isoform_18833_398	chr14	+	570	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	-37	-14	0	1	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540748	24545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
Isoform_18834_372	chr14	+	547	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-34	1100	3	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540751	24545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
Isoform_18835_478	chr14	+	512	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	1	1100	1	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540786	24545927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
Isoform_18852_385	chr14	+	1560	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-16	5	0	-1	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGGCTGTCTCTGGTT	376	False	NA	NA	False	AATAAA	-13	NA	25694577	25700887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
Isoform_18853_16	chr14	+	1590	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-44	3	-28	1	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	348	False	NA	NA	False	AATAAA	-15	NA	25694549	25700889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
Isoform_18855_17	chr14	+	1440	5	NIC	ENSMUSG00000021868.8	novel	1549	6	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_3	185.642633842552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	401	False	NA	NA	False	AATAAA	-15	NA	25694602	25700889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_25694848_25695896_25695928_25696427_25696517_25698689_25698766_25699890
Isoform_18856_609	chr14	+	2365	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	27	2	0	-2	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGGTGCCAGCATGT	2	True	NA	24	True	AATAAA	-32	NA	25842606	25887226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
Isoform_18859_25	chr14	+	2409	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTTTCTGGTGCCAGC	32	False	NA	20	True	AATAAA	-28	NA	25842636	25887222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
Isoform_18863_24	chr14	+	4050	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	1	2587	1	1152	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCTTGTGTTATGTGTC	NA	False	NA	24	True	ATTAAA	-24	NA	26300733	26352890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_18864_11	chr14	+	3477	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	-30	3191	-13	548	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGAAGTTTATTTT	NA	False	NA	NA	False	AATATA	-14	NA	26300702	26352286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_18865_10	chr14	+	4088	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	-39	2589	-22	1150	multi-exon	TRUE	canonical	3	24	junction_11	139.009495679959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTAGCTTGTGTTATGTG	NA	False	NA	22	True	ATTAAA	-22	NA	26300693	26352888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_18867_6	chr14	+	4409	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	5	2224	5	1515	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	26300737	26353253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
Isoform_18870_57	chr14	+	1775	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	-32	422	-32	22	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGATTGTGTGTTC	1654	False	NA	0	True	AATAAA	-10	NA	26359196	26377991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_18871_568	chr14	+	1680	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	63	422	63	22	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGATTGTGTGTTC	1749	False	NA	0	True	AATAAA	-10	NA	26359291	26377991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_18872_12	chr14	+	2106	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	60	-1	60	1	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	1746	False	NA	NA	False	NA	NA	NA	26359288	26378414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_18873_22	chr14	+	1819	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	-76	422	-76	22	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGATTGTGTGTTC	1610	False	NA	0	True	AATAAA	-10	NA	26359152	26377991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
Isoform_18876_21	chr14	+	823	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	313	5	313	-1	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCGGTATTTTAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	26722631	26724281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
Isoform_18878_8	chr14	+	3316	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	88	4876	-50	-99	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAATCTTGTACAGAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	26760985	26824367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
Isoform_18879_4	chr14	+	5924	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	63	2293	63	-2293	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAAACCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	26760960	26826950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
Isoform_18880_3	chr14	+	1007	2	NNC	ENSMUSG00000040717.7	novel	2186	4	NA	NA	61	-34276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGGTGTCTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	26760958	26776930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_26761187_26776151
Isoform_18881_5	chr14	+	3714	13	NIC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-59	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	15.3622914957372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACACCTTTTCCTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	26836796	27125860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
Isoform_18882_14	chr14	+	3649	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-37	6	-37	1	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACCTTTTCCTCCTGT	NA	False	NA	NA	False	AATAAA	-9	NA	27057985	27125862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
Isoform_18888_5	chr14	+	3704	17	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	6141	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	37.6893138037826	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAATAACAAAATC	8912	False	NA	NA	False	NA	NA	NA	27150774	27194314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574
Isoform_18890_3	chr14	+	2646	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-97	1401	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACATTCTTGTTTGTTTG	2229	False	NA	NA	False	AATAAA	-20	NA	27344287	27377160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
Isoform_18891_6	chr14	+	1182	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTGTCTGTTTATT	2294	False	NA	17	True	ATTAAA	-14	NA	27344352	27375761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
Isoform_18892_3	chr14	+	2492	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-6	1405	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGTTTGTTTGTTTG	2320	False	NA	NA	False	AATAAA	-24	NA	27344378	27377164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_18893_12	chr14	+	1089	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTGTCTGTTTATT	2320	False	NA	17	True	ATTAAA	-14	NA	27344378	27375761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_18894_4	chr14	+	1151	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-63	7	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTGTTTATTTTTCC	2263	False	NA	22	True	ATTAAA	-19	NA	27344321	27375766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_27344572_27374643_27375441_27375662
Isoform_18895_134	chr14	+	721	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	135	822	7	0	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690399	29696797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_18897_5	chr14	+	961	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	130	587	2	235	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGATTTACTATTA	NA	False	NA	92	True	AATATA	-18	NA	29690394	29697032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_18898_41	chr14	+	899	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	135	644	7	178	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTAAATTTGCTTTTG	NA	False	NA	35	True	AATAAA	-24	NA	29690399	29696975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_18899_6	chr14	+	832	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	21	825	21	-3	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTTTGTTTGGTTGGTT	NA	False	NA	8	True	AATAAA	-19	NA	29690285	29696794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_1890_6	chr10	-	1878	2	ISM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	53	2011	53	1	5prime_fragment	FALSE	canonical	3	447	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAAATTGCTTTAC	NA	False	NA	NA	False	AAGAAA	-21	NA	95252666	95249362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_95251054_95252479
Isoform_18903_5	chr14	+	1045	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	-10	643	-10	179	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAAATTTGCTTTTGA	NA	False	NA	36	True	AATAAA	-25	NA	29690254	29696976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
Isoform_18908_3	chr14	+	3813	11	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	61	73	-7	-73	intron_retention	FALSE	canonical	3	289	junction_4	20.0199900099875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGTAAGTTATTGA	NA	False	NA	24	True	CATAAA	-15	NA	29700354	29715103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
Isoform_18909_158	chr14	+	2045	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	69	5	1	-5	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGACACTGATTTGAG	NA	False	NA	16	True	ATTAAA	-20	NA	29700362	29715171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
Isoform_18911_5	chr14	+	3489	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	47	-1417	-21	-1231	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAAACTTGCTTTTGTT	NA	False	NA	3	True	ATTAAA	-41	NA	29700340	29716593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
Isoform_18912_30	chr14	+	2323	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-21	-1256	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTGCTACTTACCG	NA	False	NA	3	True	ATTAAA	-16	NA	29700340	29716568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
Isoform_18914_23	chr14	+	5527	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	44	5	-21	2	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAATTGTGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	30201612	30249015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_18915_6	chr14	+	5595	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-25	6	-25	1	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTCTAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	30201543	30249014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_18916_3	chr14	+	5409	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-18	1	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTCTAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	30201615	30249014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
Isoform_1892_11	chr10	-	2260	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	26	-1626	26	1626	multi-exon	FALSE	canonical	3	19	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGGGTGCATATCTT	1579	False	NA	NA	False	NA	NA	NA	95297060	95279551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95281620_95296475_95296588_95296980
Isoform_18921_4645	chr14	+	2066	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	51	1106	1	-10	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	4645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATCCTCAGACT	NA	False	NA	28	True	AATATA	-11	NA	30271138	30295571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
Isoform_18922_535	chr14	+	2100	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	17	1106	17	-10	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATCCTCAGACT	NA	False	NA	28	True	AATATA	-11	NA	30271104	30295571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
Isoform_18934_31	chr14	+	2343	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	13	31	-2	-31	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	30376329	30413243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
Isoform_18936_4	chr14	+	2255	17	ISM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	11163	8	-3526	5prime_fragment	TRUE	canonical	3	68	junction_1	12.4998437490234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGTGAGTGATGGTTT	NA	False	NA	NA	False	NA	NA	NA	30437579	30533515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345
Isoform_18937_4	chr14	+	2175	17	ISM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	94	11157	94	-3520	5prime_fragment	FALSE	canonical	3	68	junction_1	12.4998437490234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGATGGTTTTTAAAT	NA	False	NA	NA	False	AATACA	-1	NA	30437665	30533521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345
Isoform_18938_4	chr14	+	3443	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	18	4376	18	0	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437589	30540302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
Isoform_1894_8	chr10	-	2232	3	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	20	1623	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	7.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTGGGGGTGCATAT	1573	False	NA	NA	False	NA	NA	NA	95297066	95279554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_95281620_95296475_95296557_95296980
Isoform_18940_77	chr14	+	3732	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	8	2	4	-2	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACATGGTGGTTGCTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	30547554	30599165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
Isoform_18945_83	chr14	+	1642	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	12	2088	8	122	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGGATTTGTTTGCC	NA	False	NA	6	True	TTTAAA	-18	NA	30547558	30597079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
Isoform_18947_4	chr14	+	1271	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	-17	-2	3	2	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTCAGTGATTAAGAG	NA	False	NA	NA	False	NA	NA	NA	30673417	30681537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
Isoform_18948_6	chr14	+	3811	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	87	347	6	-344	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTTGGCCCAGGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	30673420	30710431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_1895_4	chr10	-	2155	2	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	15	1622	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCACTGGGGGTGCATA	1568	False	NA	NA	False	NA	NA	NA	95297071	95279555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95281620_95296980
Isoform_18950_4	chr14	+	4123	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	121	1	-1	-1	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTATGGTGTGT	NA	False	NA	26	True	AGTAAA	-17	NA	30673454	30710777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_18951_3	chr14	+	4162	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	82	1	1	-1	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTATGGTGTGT	NA	False	NA	26	True	AGTAAA	-17	NA	30673415	30710777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_18952_6	chr14	+	2634	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	47	1417	13	-13	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAACTTTGAA	NA	False	NA	NA	False	TATAAA	-37	NA	30673380	30709358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_18953_3	chr14	+	3625	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	133	340	-6	-340	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGCCCAGGGAGTGAC	NA	False	NA	NA	False	AATAAA	-25	NA	30673466	30710435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_18954_3	chr14	+	4016	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	81	1	0	-1	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTGTGTATGGTG	NA	False	NA	23	True	AGTAAA	-14	NA	30673414	30710774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
Isoform_18955_16	chr14	+	1496	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	1	1	1	-1	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTATTTGCTTCCCCATT	3527	False	NA	7	True	AATAAA	-18	NA	30723357	30733946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_18956_3	chr14	+	2020	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	-9	7	-9	-3	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGACCTATTTGCTTCC	3567	False	NA	2	True	AATAAA	-13	NA	30723397	30733941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
Isoform_18964_4	chr14	+	3063	19	ISM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	11	46626	0	-7632	5prime_fragment	FALSE	canonical	3	98	junction_2	38.2001308898281	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAAAGAGGTTG	8226	False	NA	NA	False	NA	NA	NA	30741105	30796923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
Isoform_18967_3	chr14	+	2954	18	ISM	ENSMUSG00000042323.18	ENSMUST00000112094.8	5154	30	-6	43999	-6	-7630	5prime_fragment	FALSE	canonical	3	61	junction_10	43.0484558395886	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAAAAGAGGTTGGT	8241	False	NA	NA	False	NA	NA	NA	30741120	30796925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
Isoform_18969_5	chr14	+	3062	19	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	-7630	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	49.687076343407	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAAAAGAGGTTGGT	8226	False	NA	NA	False	NA	NA	NA	30741105	30796925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
Isoform_1897_7	chr10	-	2163	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7799	1623	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTGGGGGTGCATAT	9352	False	NA	NA	False	NA	NA	NA	95289287	95279554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_95281620_95289189
Isoform_18973_485	chr14	+	1810	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	36	2	36	1	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGCTTCATTCCAG	NA	False	NA	18	True	AATAAA	-20	NA	30853045	30861079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
Isoform_18975_6	chr14	+	1933	13	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	36	0	intron_retention	FALSE	canonical	3	528	junction_7	37.3834299300283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	30853045	30861081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860430_30860565_30860631_30860737
Isoform_18976_7	chr14	+	2000	12	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	36	0	intron_retention	FALSE	canonical	3	592	junction_6	26.239519749687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853045	30861080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
Isoform_18978_619	chr14	+	3402	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	39	19	-14	-5	multi-exon	FALSE	canonical	3	305	junction_12	31.9899886683318	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTCTGGTTGCTAT	NA	False	NA	6	True	AATAAA	-13	NA	30973445	30981882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
Isoform_18980_15	chr14	+	3071	17	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-20	-5	combination_of_known_junctions	TRUE	canonical	3	13	junction_12	94.0883062606613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTCTGGTTGCTAT	NA	False	NA	6	True	AATAAA	-13	NA	30973439	30981882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
Isoform_18988_3	chr14	+	3373	18	ISM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	0	1668	0	303	intron_retention	FALSE	canonical	3	214	junction_6	21.2963924686772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGATGATATAAGTCT	NA	False	NA	NA	False	NA	NA	NA	31058594	31092273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154
Isoform_18989_103	chr14	+	3639	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	5	4	5	-4	multi-exon	TRUE	canonical	3	214	junction_6	22.7354348979737	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATGTAGTTTAATGT	NA	False	NA	11	True	AATAAA	-16	NA	31058599	31093937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
Isoform_1899_9	chr10	-	708	7	NIC	ENSMUSG00000062981.6	novel	677	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	1770.46641688944	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337799	95316666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95316840_95326107_95326275_95326396_95326444_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_18991_34	chr14	+	4053	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	689	176	-108	-176	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATGTCTTGTTTTAT	6291	False	NA	NA	False	AATAAA	-18	NA	31217044	31231639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
Isoform_18992_100	chr14	+	4005	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	739	174	-58	-174	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTCTTGTTTTATTT	6341	False	NA	NA	False	AATAAA	-20	NA	31217094	31231641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
Isoform_18996_13	chr14	+	1964	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	-33	393	-4	-393	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCGCAGAATACTGGCTG	NA	False	NA	4	True	AATAAA	-20	NA	31362980	31390143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
Isoform_18997_4	chr14	+	2064	9	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-25	-94	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	64.0858798800485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAATACTTCTTTAAA	NA	False	NA	15	True	ATTAAA	-20	NA	31807305	31825065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31807524_31807805_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_18998_3	chr14	+	2139	9	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	64.0858798800485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTAATGTTTCAGTT	NA	False	NA	22	True	AATACA	-21	NA	31807326	31825161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31807524_31807805_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_18999_3	chr14	+	1937	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	77.3866518047591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTTTAATGTTTCA	NA	False	NA	19	True	AATACA	-18	NA	31807320	31825158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31807524_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_19_3936	ERCC-00004	+	505	1	FSM	ERCC-00004A	DQ516752	507	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3936	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	2	507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00004_+_0_500
Isoform_19000_85	chr14	+	2028	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	349	-1	-23	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807718	31825160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_19006_6	chr14	+	2423	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	-46	-1	-7	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807323	31825160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
Isoform_1901_609	chr10	-	651	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	13	-3	0	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337789	95316666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_19011_5	chr14	+	1954	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	70.5948486297777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTAATGTTTCAGTT	NA	False	NA	22	True	AATACA	-21	NA	31807733	31825161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821405_31821589_31822942_31823052_31824213
Isoform_19012_5	chr14	+	1749	7	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	81.7851181790156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807754	31825160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31822942_31823052_31824213
Isoform_19014_303	chr14	+	3401	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	62	602	-11	6	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	4	True	ATTAAA	-19	NA	31881883	31901210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
Isoform_19017_37	chr14	+	3389	10	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_6	182.100365759865	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTGTTTGTGTTA	NA	False	NA	-1	True	ATTAAA	-14	NA	31881887	31901205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896349_31896491_31897895_31898913_31899189_31899331_31899779
Isoform_1902_55	chr10	-	686	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	-22	-3	-22	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337824	95316666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_19024_35	chr14	+	3799	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACTTATATTTTATTC	NA	False	NA	20	True	AATAAA	-33	NA	31923914	32019182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_19028_3	chr14	+	2942	9	FSM	ENSMUSG00000021911.17	ENSMUST00000164137.8	3013	9	1	70	1	-70	multi-exon	FALSE	canonical	3	299	junction_1	64.7586866759974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACTTTCCAAATGAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	31923906	31964982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145
Isoform_1903_21	chr10	-	746	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	13	-98	0	95	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTGGGGACTCTCTT	NA	False	NA	87	True	ATTAAA	-5	NA	95337789	95316571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
Isoform_19030_95	chr14	+	4072	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	9	332	9	-2	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCATGCCACTTATAT	NA	False	NA	13	True	AATAAA	-26	NA	31923914	32019175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_19031_3	chr14	+	4401	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	9	3	9	0	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTTAGATGCTC	NA	False	NA	NA	False	AATAAA	-20	NA	31923914	32019504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
Isoform_19032_488	chr14	+	3703	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	114.261570955515	488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32043971	32070104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462_32069787_32069806
Isoform_19035_18	chr14	+	3839	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_23	116.422475564794	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32043971	32070104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462_32069787_32069807
Isoform_19037_11	chr14	+	3663	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	114.261570955515	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTTCCTACC	NA	False	NA	14	True	AATAAA	-20	NA	32044014	32070110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462_32069787_32069809
Isoform_19045_5	chr14	+	1020	2	ISM	ENSMUSG00000041673.13	ENSMUST00000120866.8	1231	3	3880	0	13	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGGACTATGGTTTGG	NA	False	NA	NA	False	CATAAA	-14	NA	32717234	32731353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_32717266_32730364
Isoform_19046_10	chr14	+	2311	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	39	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGCGCCTGTCACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	33041698	33091886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_19047_8	chr14	+	2402	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-52	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGCGCCTGTCACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	33041607	33091886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_19048_3	chr14	+	2434	8	NNC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-36	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.43333157097012	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGCGCCTGTCACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	33041623	33091886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_33041890_33065185_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
Isoform_19049_13	chr14	+	1874	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	1	5	1	-5	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTCTGTGGATTTG	NA	False	NA	NA	False	CATAAA	-14	NA	33807938	33822523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
Isoform_19054_1136	chr14	+	3117	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-88	361	-88	-361	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATGTTTCTTTTCTG	NA	False	NA	13	True	ATTAAA	-16	NA	34032595	34066861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_19057_1569	chr14	+	2933	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	96	361	96	-361	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATGTTTCTTTTCTG	NA	False	NA	13	True	ATTAAA	-16	NA	34032779	34066861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_19060_52	chr14	+	3446	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-57	1	-57	-1	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAAGTTCTCTATGGGGA	NA	False	NA	12	True	AATAAA	-21	NA	34032626	34067221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
Isoform_19089_16	chr14	+	3912	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	58	4	58	-4	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTCTGCCTGTTTACT	4948	False	NA	2	True	AATAAA	-12	NA	34097479	34126240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
Isoform_1909_129	chr10	-	3210	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400008	95382868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
Isoform_19107_34	chr14	+	4602	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-16	1765	-16	1	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGGTTGTTGTTCCC	NA	False	NA	8	True	AATAAA	-20	NA	34395868	34468175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_19108_4	chr14	+	6372	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-27	6	-27	-6	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACACGTTGTCTTTAA	NA	False	NA	8	True	AATAAA	-13	NA	34395857	34469934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
Isoform_19109_9	chr14	+	2332	6	ISM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-263	21265	-18	-14	5prime_fragment	FALSE	canonical	3	148	junction_3	313.603188759298	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAGTTACTGCACTGA	NA	False	NA	NA	False	GATAAA	-31	NA	34395866	34446772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662
Isoform_1911_31	chr10	-	3303	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-93	0	-93	0	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400101	95382868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
Isoform_19110_3	chr14	+	1448	4	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-308	-339	multi-exon	FALSE	canonical	0	0	junction_1	11.6714276000077	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42988552	43045106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr14_+_42988898_43039360_43039493_43040175_43040358_43044317
Isoform_19111_11	chr14	+	1446	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-201	346	-19	-339	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43132473	43163122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
Isoform_19115_72	chr14	+	2176	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	42	16	2	-16	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACCAAAGGACTAACCAT	NA	False	NA	NA	False	AATAAA	-23	NA	45567286	45587146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_19116_144	chr14	+	1563	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	631	0	-631	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	31	True	AATAAA	-23	NA	45567284	45586531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_19117_216	chr14	+	1313	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	42	879	2	-879	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTATGTAATTCAGTAAT	NA	False	NA	25	True	AATAAA	-18	NA	45567286	45586283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
Isoform_19124_13	chr14	+	4226	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	132	8616	-2	8	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGAGAAGCTCATTCA	NA	False	NA	3	True	ATTAAA	-24	NA	45588681	45614348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
Isoform_19126_10	chr14	+	791	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	4	-71	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCCTAATGCTTGAGT	NA	False	NA	1	True	NA	NA	NA	46998055	47009055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_19127_32	chr14	+	739	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	3	True	AATAAA	-18	NA	46998030	47008978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_19129_11	chr14	+	697	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	72	148	18	1	multi-exon	FALSE	canonical	3	28	junction_6	72.4563204099335	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	3	True	AATAAA	-18	NA	46998069	47008978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
Isoform_19130_3	chr14	+	657	7	FSM	ENSMUSG00000037628.11	ENSMUST00000226621.2	634	7	-18	-5	-9	5	multi-exon	FALSE	canonical	3	26	junction_1	78.2254576351089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCCAGCATAGTCTGT	NA	False	NA	7	True	AATAAA	-22	NA	46998033	47008982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
Isoform_19132_22	chr14	+	1225	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	94	5	0	-5	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTGGACACTGTCT	631	False	NA	9	True	AATAAA	-19	NA	47069675	47091645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
Isoform_19133_4	chr14	+	2028	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	71	4778	71	1288	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTATAATGTAATTGAC	NA	False	NA	NA	False	AGTAAA	-16	NA	47514458	47528781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47514679_47526973
Isoform_19134_3	chr14	+	2274	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	-41	4644	-41	1422	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGAAAAGAGAATGTAGC	NA	False	NA	NA	False	ACTAAA	-30	NA	47514346	47528915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47514679_47526973
Isoform_19136_42	chr14	+	4497	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTTTCTTTGTGTA	9636	False	NA	4	True	AAGAAA	-15	NA	47535731	47560549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
Isoform_19137_4	chr14	+	4603	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTTTGCATGTGACC	9643	False	NA	12	True	AATAAA	-17	NA	47535738	47560662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
Isoform_19138_4	chr14	+	3828	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	9	-667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAAACTGGTTGTGTGT	9639	False	NA	NA	False	NA	NA	NA	47535734	47559885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557391
Isoform_19140_4	chr14	+	3041	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	10	-1453	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGATAGTTTTTGTGA	9640	False	NA	NA	False	AATAAA	-16	NA	47535735	47559099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557391
Isoform_19141_3	chr14	+	1041	6	NIC	ENSMUSG00000050335.18	novel	646	5	NA	NA	493	3	combination_of_known_junctions	TRUE	canonical	3	5	junction_1	34.931933814205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47605700	47623254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_47605826_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_19142_30	chr14	+	952	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	104	363	1	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611373	47623254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_19143_30	chr14	+	979	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	28	291	1	3	multi-exon	FALSE	canonical	3	42	junction_1	20.2286924935845	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611373	47623254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
Isoform_19144_3	chr14	+	3390	6	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	33.4269352468933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	False	NA	7	True	AATAAA	-15	NA	47710081	47769412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47763661_47763772_47766631
Isoform_19145_3	chr14	+	3217	5	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	-3	-15	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	35.4436171968946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAACGTTTTAAAT	NA	False	NA	-9	True	TTTAAA	-13	NA	47710056	47769396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47763661_47763772_47766631
Isoform_19146_21	chr14	+	3124	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	2	6	2	1	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710019	47769413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
Isoform_19149_5	chr14	+	2994	3	FSM	ENSMUSG00000037536.15	ENSMUST00000227162.2	373	3	-23	-2598	5	-15	multi-exon	FALSE	canonical	3	11	junction_2	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAACGTTTTAAAT	NA	False	NA	-9	True	TTTAAA	-13	NA	47710022	47769396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47710175_47738250_47738328_47766631
Isoform_19150_92	chr14	+	3049	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-58	2	0	1	multi-exon	FALSE	canonical	3	71	junction_1	10.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710017	47769413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47710175_47763661_47763772_47766631
Isoform_19151_20	chr14	+	3076	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-85	2	-27	1	multi-exon	FALSE	canonical	3	71	junction_1	10.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47709990	47769413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47710175_47763661_47763772_47766631
Isoform_19154_17	chr14	+	2939	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	0	-2	0	1	multi-exon	FALSE	canonical	3	19	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCTGGTCTTAAAA	NA	False	NA	8	True	AATAAA	-16	NA	47710017	47769413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_47710175_47766631
Isoform_19157_6	chr14	+	1200	6	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	10552	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	206.816440352309	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTCTTCAGTTCA	NA	False	NA	NA	False	NA	NA	NA	47886767	47912324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206
Isoform_1916_45	chr10	-	3213	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400008	95382868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
Isoform_19163_22	chr14	+	1249	6	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	0	61691	0	10551	5prime_fragment	FALSE	canonical	3	499	junction_2	68.4122795994988	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACATTCTTCAGTTC	NA	False	NA	NA	False	NA	NA	NA	47886767	47912323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206
Isoform_19166_12	chr14	+	2349	19	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	27	35903	22	-3783	5prime_fragment	FALSE	canonical	3	499	junction_2	88.0701354911646	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTTTAATTTTTTAT	NA	False	NA	10	True	AATAAA	-27	NA	47886794	47938111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076
Isoform_19167_8	chr14	+	2851	27	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	52	29276	-31	2844	5prime_fragment	TRUE	canonical	3	462	junction_23	103.704953862491	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTTTTTAGCTAACA	NA	False	NA	NA	False	NA	NA	NA	47886819	47944738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698
Isoform_19168_8	chr14	+	2795	26	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	34	2844	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	121.609565413252	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTTTTTAGCTAACA	NA	False	NA	NA	False	NA	NA	NA	47886806	47944738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698
Isoform_19169_9	chr14	+	3467	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-25	2458	-25	-261	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	48358254	48495887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_1917_11	chr10	-	3299	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-85	1	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTATTTTTAGTTTA	NA	False	NA	-20	True	AATAAA	-17	NA	95400093	95382867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
Isoform_19170_17	chr14	+	3377	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	65	2458	19	-261	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	48358344	48495887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_19171_29	chr14	+	1773	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	62	4065	16	-1	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATCTCAACTGCCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	48358341	48494280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_19172_20	chr14	+	1870	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-35	4065	-35	-1	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATCTCAACTGCCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	48358244	48494280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
Isoform_19173_3	chr14	+	1532	10	ISM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	32	14356	2	4360	5prime_fragment	FALSE	canonical	3	30	junction_9	4.84067131350933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGGGTTCTTGTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	48683840	48724613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197
Isoform_19174_8	chr14	+	2841	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-21	2665	9	1	multi-exon	TRUE	canonical	3	23	junction_12	6.92306932573182	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATGTTGTCCTTCTCT	NA	False	NA	NA	False	ATTAAA	-32	NA	48683817	48750248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
Isoform_19175_4	chr14	+	2970	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-16	2531	14	135	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTATACATATTACT	NA	False	NA	NA	False	AATAAA	-18	NA	48683822	48750382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
Isoform_19177_10	chr14	+	3056	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	76	3189	29	271	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49304027	49325147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
Isoform_19180_5	chr14	+	2350	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	7	4	intron_retention	TRUE	canonical	3	13	junction_8	38.1042976578758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTCTTATGCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49304005	49328259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
Isoform_19183_43	chr14	+	4447	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	1	-2	-1	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAGCTGTGTGCATTC	NA	False	NA	36	True	AATAAA	-33	NA	49409680	49428341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
Isoform_19188_10	chr14	+	1877	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	196.861327391192	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_19191_19	chr14	+	1798	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	194.893064696173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_19194_335	chr14	+	1808	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	84	2	0	-1	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGCTTCTTTGGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	51045381	51058756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_19196_16	chr14	+	2194	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	-21	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
Isoform_19199_351	chr14	+	1226	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	13	0	3	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	192	False	NA	14	True	AATAAA	-15	NA	51162437	51164596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_19200_53	chr14	+	1231	5	FSM	ENSMUSG00000035960.15	ENSMUST00000136753.8	655	5	12	-588	3	0	multi-exon	FALSE	canonical	3	124	junction_1	445.940298694792	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	192	False	NA	14	True	AATAAA	-15	NA	51162437	51164596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51162492_51162669_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_19201_64	chr14	+	1398	4	FSM	ENSMUSG00000035960.15	ENSMUST00000154288.3	935	4	21	-484	21	7	multi-exon	FALSE	canonical	3	1054	junction_2	68.6310587286997	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCCCTTTGTGAA	210	False	NA	21	True	AATAAA	-22	NA	51162455	51164603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
Isoform_19204_79	chr14	+	1335	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	207	1400	3	1118	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTGGTTCGGTA	9237	False	NA	5	True	AATAAA	-17	NA	51181965	51189469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
Isoform_19205_18	chr14	+	1206	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	168	-2	-84	2	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGCTTGTCTTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	51193616	51202208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
Isoform_19206_9	chr14	+	1600	13	FSM	ENSMUSG00000004561.15	ENSMUST00000164902.8	1461	13	-13	-126	-2	1	multi-exon	FALSE	canonical	0	0	junction_8	49.8556248916141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122389	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823
Isoform_19207_119	chr14	+	1525	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	91	7	-2	1	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122389	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19209_11	chr14	+	1587	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	29	7	-5	1	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122327	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_1921_4	chr10	-	5989	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	4	0	1	0	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323208	100279763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
Isoform_19210_4	chr14	+	1469	13	FSM	ENSMUSG00000004561.15	ENSMUST00000165100.8	1430	13	29	-68	0	1	multi-exon	FALSE	canonical	3	48	junction_7	37.728102552636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122374	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19211_9	chr14	+	2158	12	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	141	junction_9	16.6465443265721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122376	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19212_3	chr14	+	2320	12	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	-84	1	intron_retention	FALSE	canonical	3	141	junction_9	16.6465443265721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122214	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19213_3	chr14	+	1509	14	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.7277864767855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122389	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52122481_52122607_52122762_52122860_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19214_5	chr14	+	1610	13	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_7	50.0157614046701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122387	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52122481_52122607_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19215_3	chr14	+	3611	10	NIC	ENSMUSG00000004561.15	novel	3404	11	NA	NA	7	1	intron_retention	FALSE	canonical	3	141	junction_7	17.8207813216363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGAGGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	52122381	52129318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52122481_52122607_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
Isoform_19216_3	chr14	+	1346	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	49	939	49	0	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTGCAATTCTGCC	NA	False	NA	14	True	AATAAA	-25	NA	52131115	52133263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
Isoform_19217_16	chr14	+	3478	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	-21	1893	-21	-1893	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATCTTTTAAATGTGC	NA	False	NA	4	True	AGTAAA	-16	NA	52516581	52531965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
Isoform_19218_312	chr14	+	3173	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	441	1891	22	-1891	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTTTTAAATGTGCAT	NA	False	NA	6	True	AGTAAA	-18	NA	52517043	52531967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
Isoform_1922_17	chr10	-	2343	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	150	71	3	-71	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCTGTTTGTCTGATT	NA	False	NA	-2	True	AATAAA	-13	NA	100425107	100408197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
Isoform_19229_26	chr14	+	2598	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	0	-90	0	1	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	12	True	AATAAA	-19	NA	54491644	54506622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_19230_352	chr14	+	2372	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	30	-1	-11	1	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGACACTGTTTAATAT	NA	False	NA	12	True	AATAAA	-19	NA	54496718	54506622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_19232_8	chr14	+	2828	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	16	-438	16	438	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAGGTTAGTGGCTAA	NA	False	NA	NA	False	AATAAA	-15	NA	54496704	54507064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
Isoform_19236_3	chr14	+	730	3	FSM	ENSMUSG00000000959.8	ENSMUST00000198107.2	1438	3	-2	710	-2	-710	multi-exon	FALSE	canonical	3	527	junction_1	34.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGTTTACAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	54598295	54601242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54598375_54598778_54598926_54600738
Isoform_19237_7	chr14	+	2542	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-7	3	0	-3	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAGTTCAGAGTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	54598290	54607127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_19239_119	chr14	+	1522	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	1016	0	20	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGATGTTTGTTAAGT	NA	False	NA	41	True	AGTAAA	-18	NA	54598297	54606114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
Isoform_1924_11	chr10	-	2014	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	13	6	6	-6	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATGATCAATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105677226	105599055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
Isoform_19240_366	chr14	+	408	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	1	9	1	1	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGACTCTCTCTGGC	NA	False	NA	18	True	AATAAA	-19	NA	54664366	54667204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
Isoform_19241_43	chr14	+	486	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCCAGACTCTCTCTGG	NA	False	NA	17	True	AATAAA	-18	NA	54664366	54667203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
Isoform_19242_5	chr14	+	431	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	30	2	30	1	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGACTCTCTCTGGC	NA	False	NA	18	True	AATAAA	-19	NA	54664416	54667204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
Isoform_19243_16	chr14	+	2540	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-8	64	-8	-64	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	54669060	54678658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
Isoform_19245_556	chr14	+	2974	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	37	1217	37	537	multi-exon	FALSE	canonical	3	169	junction_1	20.8306664959782	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701630	54707737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
Isoform_19247_8	chr14	+	3002	7	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	29	545	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	73.7346970940788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCAGCTGTGAGCCTGC	NA	False	NA	12	True	AATAAA	-25	NA	54701622	54707745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_54702069_54702360_54702406_54703030_54703179_54704916_54705108_54705220_54706239_54706492_54706623_54706721
Isoform_19249_6	chr14	+	1493	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-60	-622	-39	-6	multi-exon	FALSE	canonical	3	26	junction_1	179.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54923633	54928192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54924111_54924493_54924578_54927260
Isoform_1925_4	chr10	-	4490	17	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-6	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	8.47030659126339	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTGTCTGCTCAGTT	NA	False	NA	-2	True	AATAAA	-13	NA	110845870	110777641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
Isoform_19251_31	chr14	+	1870	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	-33	6	-33	-6	multi-exon	FALSE	canonical	3	385	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54923639	54928192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54924578_54927260
Isoform_19252_68	chr14	+	1025	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	812	6	-16	-6	multi-exon	FALSE	canonical	3	385	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAATTACTGGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	54924484	54928192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54924578_54927260
Isoform_19253_6	chr14	+	1204	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	-9	6	-9	5	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTTTAAAAACTGT	NA	False	NA	-5	True	NA	NA	NA	55051588	55091546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
Isoform_19254_6	chr14	+	3505	4	FSM	ENSMUSG00000089682.11	ENSMUST00000022806.10	3509	4	3	1	-1	-1	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGAACAGGGTTTTGT	NA	False	NA	24	True	AATAAA	-28	NA	55120836	55125690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55122840
Isoform_19255_6	chr14	+	1848	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	-12	-61	-5	1	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATTTAAAAAAAA	NA	False	NA	22	True	NA	NA	NA	55131599	55135614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
Isoform_19257_4	chr14	+	2527	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-4	-762	-4	749	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131600	55136375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
Isoform_19258_36	chr14	+	1715	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-5	51	-5	9	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAATTAAAAAA	NA	False	NA	-30	True	AAAAAG	-44	NA	55131599	55135562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
Isoform_19259_7	chr14	+	1614	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	145	2	137	-2	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAATATTTAAAAA	NA	False	NA	19	True	NA	NA	NA	55131749	55135611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
Isoform_19260_104	chr14	+	971	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-5	64	-5	9	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAATTAAAAAA	NA	False	NA	-30	True	AAAAAG	-44	NA	55131599	55135562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
Isoform_19262_3	chr14	+	1634	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	142	-746	134	746	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAATTGGCCCTTTG	NA	False	NA	10	True	AATAAA	-9	NA	55131746	55136372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
Isoform_19263_4	chr14	+	342	3	ISM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	2373	-23	2158	1	3prime_fragment	FALSE	canonical	3	2071	junction_2	152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATTTAAAAAAAA	NA	False	NA	22	True	NA	NA	NA	55134447	55135614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_55134497_55134577_55134730_55135473
Isoform_19264_3	chr14	+	1143	3	ISM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	2333	-784	2118	749	3prime_fragment	FALSE	canonical	3	2071	junction_2	152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55134407	55136375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_55134497_55134577_55134730_55135473
Isoform_19266_311	chr14	+	1092	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	102	6	102	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253012	55261588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_19267_13	chr14	+	1168	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	26	6	26	-6	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55252936	55261588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_19270_5	chr14	+	1012	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	-6	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	462.088976520997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253020	55261588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55253046_55253625_55253686_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
Isoform_19272_76	chr14	+	2517	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	311	2	311	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGGGTCTTTATTTCCG	NA	False	NA	5	True	AATAAA	-16	NA	55332551	55336441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55333464_55334836
Isoform_19274_58	chr14	+	2788	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	40	2	40	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGGGTCTTTATTTCCG	NA	False	NA	5	True	AATAAA	-16	NA	55332280	55336441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55333464_55334836
Isoform_19275_14	chr14	+	1359	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	32	1	11	1	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGCGTGTTTATTTCT	NA	False	NA	10	True	AATAAA	-25	NA	55716246	55727796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
Isoform_19276_24	chr14	+	1244	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	147	1	-1	1	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGCGTGTTTATTTCT	NA	False	NA	10	True	AATAAA	-25	NA	55716361	55727796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
Isoform_19278_1871	chr14	+	2131	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1146	0	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGGACTCCCCATGC	9014	False	NA	26	True	ATTAAA	-23	NA	55777845	55786328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_19279_515	chr14	+	2211	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	43	1146	43	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGGACTCCCCATGC	8934	False	NA	26	True	ATTAAA	-23	NA	55777765	55786328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_1928_76	chr10	-	3124	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	586	42	-586	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTTTCAGTTACA	NA	False	NA	-1	True	ATTAAA	-15	NA	115087330	115034362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_19280_1035	chr14	+	2198	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1079	0	4	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTCTGCATAGGCTT	9014	False	NA	35	True	NA	NA	NA	55777845	55786395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_19282_281	chr14	+	2273	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	43	1084	43	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCTGTGTCTGCATA	8934	False	NA	30	True	NA	NA	NA	55777765	55786390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_19286_59	chr14	+	2810	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	467	0	-274	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGTCTTAAAATCCT	9014	False	NA	12	True	AATACA	-18	NA	55777845	55787007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_19289_50	chr14	+	3083	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	194	0	-1	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGCAGTTGGAAGAATG	9014	False	NA	3	True	NA	NA	NA	55777845	55787280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
Isoform_1929_32	chr10	-	2223	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	1	1528	1	-4	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATTATTTTTGTAGTT	NA	False	NA	-6	True	ATTAAA	-17	NA	115087371	115035304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_1930_5	chr10	-	2787	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	-9	974	-9	550	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAATACATGGCTTCAA	NA	False	NA	NA	False	AATAAA	-34	NA	115087381	115034750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_19319_3	chr14	+	2500	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	37	1	18	0	multi-exon	TRUE	canonical	3	9	junction_1	36.2303430166213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797499	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19320_8	chr14	+	2676	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	-49	-3	3	0	multi-exon	FALSE	canonical	3	32	junction_2	36.5692661191033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797941	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19321_57	chr14	+	2692	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	27.5910366989435	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797948	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19322_6	chr14	+	2521	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	39.769296432996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797961	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798085_55798666_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19323_29	chr14	+	2531	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.9189023390625	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797974	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798085_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19324_9	chr14	+	2531	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	35.7694573852142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797948	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798085_55798692_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19325_4	chr14	+	2883	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	37.1563848991732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797948	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798276_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19326_4	chr14	+	2722	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	37.1563848991732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797974	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798276_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19327_4	chr14	+	2475	15	NIC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	37.8544473433898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTCTGTGTCTGTGT	NA	False	NA	8	True	AATAAA	-13	NA	55798373	55807516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55798433_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19328_7	chr14	+	2666	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-6	0	-6	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798421	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_1933_3	chr10	-	4554	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	49	-851	49	851	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTACTTTCTTGGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	115087323	115032925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_19330_5	chr14	+	3146	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-486	0	3	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797941	55807521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
Isoform_19332_109	chr14	+	1004	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	108	0	0	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815924	55818985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
Isoform_19335_230	chr14	+	3420	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	44	21	8	-1	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	4218	False	NA	17	True	AATAAA	-20	NA	55829208	55841129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_19336_12	chr14	+	3564	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	-101	22	-101	1	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGGTGGTCCTTCT	4073	False	NA	16	True	AATAAA	-19	NA	55829063	55841128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_19339_25	chr14	+	3417	21	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	45.0271029492238	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGGTGGTCCTTCTTC	4219	False	NA	18	True	AATAAA	-21	NA	55829209	55841130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832929_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
Isoform_19344_4	chr14	+	2312	10	FSM	ENSMUSG00000002325.16	ENSMUST00000134863.8	2959	10	647	0	233	0	multi-exon	TRUE	canonical	1	2	junction_1	18.2337361997608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841674	55847487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55841701_55841924_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
Isoform_19345_22	chr14	+	2248	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	211	0	211	0	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841652	55847487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
Isoform_19348_184	chr14	+	2057	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	127	0	127	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1455	False	NA	9	True	ATTAAA	-21	NA	55855620	55862852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_19349_5	chr14	+	2193	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	-9	0	-9	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1319	False	NA	9	True	ATTAAA	-21	NA	55855484	55862852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_19350_3	chr14	+	2362	17	NIC	ENSMUSG00000002324.9	novel	2184	20	NA	NA	95	0	intron_retention	FALSE	canonical	3	23	junction_4	6.37101591192488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1423	False	NA	9	True	ATTAAA	-21	NA	55855588	55862852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55855811_55856002_55856116_55856198_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
Isoform_19351_52	chr14	+	1492	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	43	458	20	426	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTAGACGTTCTTCT	NA	False	NA	19	True	ATTAAA	-20	NA	55909734	55916199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
Isoform_19352_4	chr14	+	1479	10	NIC	ENSMUSG00000002326.7	novel	773	7	NA	NA	14	424	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGCTTAGACGTTCTT	NA	False	NA	17	True	ATTAAA	-18	NA	55909853	55916197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
Isoform_19353_1239	chr14	+	2227	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	27	1440	27	-1440	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	1239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTTATTTTATTT	NA	False	NA	23	True	NA	NA	NA	55983176	55991517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
Isoform_19360_3	chr14	+	3916	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	76	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	13.7688142885864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	17	True	AATAAA	-17	NA	56062327	56071399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070413_56070438
Isoform_19361_3	chr14	+	3973	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	13	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	17.2691117959848	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	17	True	AATAAA	-17	NA	56062264	56071399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069528_56069679_56070413_56070440
Isoform_19363_4	chr14	+	3218	10	FSM	ENSMUSG00000023411.13	ENSMUST00000024179.6	3267	10	49	0	49	0	multi-exon	FALSE	canonical	3	26	junction_9	7.13537527022325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062300	56071400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
Isoform_19364_3	chr14	+	7320	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	184	7	165	-7	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAGCCAATGTTTAAT	NA	False	NA	8	True	AATAAA	-8	NA	56091657	56112186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_19365_3	chr14	+	3875	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	172	3464	153	-3019	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCAGTCTCCCTTGCC	NA	False	NA	50	True	NA	NA	NA	56091645	56108729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_19366_3	chr14	+	3794	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	173	3544	154	-3099	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGTGTCTGGCTATT	NA	False	NA	-30	True	NA	NA	NA	56091646	56108649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
Isoform_19367_5	chr14	+	2646	4	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	13	7950	13	-7604	intron_retention	FALSE	canonical	3	63	junction_2	8.64098759787715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAAAAGAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56122416	56126288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170
Isoform_19368_10	chr14	+	3471	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	45	382	18	-36	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGATTGTGTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	56122448	56133856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_1937_15	chr10	-	3072	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	13	-1	-3	1	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198139	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
Isoform_19370_4	chr14	+	5841	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	52	-1995	-18	1	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGTGGCTACTACTCA	NA	False	NA	7	True	NA	NA	NA	56122455	56136233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19371_4	chr14	+	3458	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	-8	448	-8	-102	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCTGTATCTGTTTGAA	NA	False	NA	NA	False	NA	NA	NA	56122395	56133790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19372_9	chr14	+	3533	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	25	340	-2	6	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTCTCTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	56122428	56133898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19373_3	chr14	+	3747	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	2	149	2	-149	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCCCAGTGTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	56122405	56134089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19375_10	chr14	+	3494	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	25	379	-2	-33	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTGTGTTAAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	56122428	56133859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19376_3	chr14	+	5857	8	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	8	2	intron_retention	FALSE	canonical	0	0	junction_4	27.8560439343685	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGGCTACTACTCAT	NA	False	NA	8	True	NA	NA	NA	56122438	56136234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125379_56125475_56131448_56131557_56131743_56131846_56132319
Isoform_19377_6	chr14	+	4027	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	-77	0	-77	0	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGTCATTGTGGCA	NA	False	NA	5	True	AGTAAA	-14	NA	56602447	56626007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
Isoform_1938_3	chr10	-	2778	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	22	-1	14	1	multi-exon	FALSE	canonical	2	3	junction_6	78.0590944235342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198384	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
Isoform_19382_3	chr14	+	1645	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-32	-4	-29	4	multi-exon	TRUE	canonical	3	453	junction_4	33.16700167335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCTCTTGCTTGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	56640124	56679374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
Isoform_19385_35	chr14	+	3518	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_12	57.9852946875326	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640141	56726892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
Isoform_19386_3	chr14	+	3867	32	ISM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	9	12566	9	-12564	5prime_fragment	FALSE	canonical	2	8	junction_14	4.30932005472175	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAATAAAGACT	1096	False	NA	NA	False	NA	NA	NA	56813084	56884685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630
Isoform_1939_61	chr10	-	2984	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	29	-1	-7	1	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198143	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_19393_8	chr14	+	1357	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	2	22654	2	799	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACAGATTATTACTTG	1780	False	NA	3	True	NA	NA	NA	56905706	56912233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_56906022_56909861_56910018_56911347
Isoform_19394_6	chr14	+	2918	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	18	3	18	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1796	False	NA	29	True	ATTAAA	-15	NA	56905722	56934884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
Isoform_19396_4	chr14	+	4768	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-84	-11	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATAGGCTGGGTTTTT	NA	False	NA	10	True	AATAAA	-6	NA	57124025	57197798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_19397_4	chr14	+	5010	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-92	223	combination_of_known_junctions	TRUE	canonical	2	100	junction_12	26.7082683306541	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTATGTATATATGT	NA	False	NA	62	True	NA	NA	NA	57124017	57198032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
Isoform_19399_7	chr14	+	3071	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	17	0	-1	0	multi-exon	TRUE	canonical	3	32	junction_12	10.0195009855781	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661535	57755393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
Isoform_1940_7	chr10	-	3019	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.340692271461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198205	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_115178159_115178185_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_19400_6	chr14	+	1280	3	FSM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAAGCCACTGGTCT	NA	False	NA	10	True	ATTAAA	-22	NA	57762227	57780623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_57762379_57762760_57763057_57779790
Isoform_19401_3	chr14	+	1332	3	FSM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	-61	3	-61	-3	multi-exon	FALSE	canonical	3	15	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTGAAAGCCACTGG	NA	False	NA	7	True	ATTAAA	-19	NA	57762172	57780620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_57762379_57762760_57763057_57779790
Isoform_19403_5	chr14	+	1233	2	ISM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	420	3	420	-3	3prime_fragment	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTGAAAGCCACTGG	NA	False	NA	7	True	ATTAAA	-19	NA	57762653	57780620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_57763057_57779790
Isoform_19404_26	chr14	+	1910	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	37	3178	-1	1125	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	58035673	58040917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_19405_479	chr14	+	605	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	35	4485	-3	6	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCCATTAAGCCTTTAA	NA	False	NA	NA	False	AATAAA	-27	NA	58035671	58039610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_19406_261	chr14	+	780	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	37	4308	-1	3	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGTGTAAAAGTTAAT	NA	False	NA	-1	True	TATAAA	-31	NA	58035673	58039787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_19408_29	chr14	+	690	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	-50	4485	-50	6	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCCATTAAGCCTTTAA	NA	False	NA	NA	False	AATAAA	-27	NA	58035586	58039610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
Isoform_19413_228	chr14	+	511	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	17	2349	17	-1	multi-exon	FALSE	canonical	3	956	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTGTCTCATACGGA	NA	False	NA	24	True	ATTAAA	-16	NA	58063707	58064404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58063780_58063965
Isoform_19415_5	chr14	+	3617	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	90.3297906251319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438681	59474713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19416_4	chr14	+	3778	13	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	111.314463221193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGTACAGTTGTGGT	NA	False	NA	4	True	AATAAA	-14	NA	59438897	59474712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59439034_59443073_59443172_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19417_26	chr14	+	3961	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	-53	-5	-34	5	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGTTGTGGTTGTTTTC	NA	False	NA	11	True	AATAAA	-21	NA	59438623	59474719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19418_99	chr14	+	3891	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	12	0	-2	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438688	59474714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19422_6	chr14	+	4086	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	-183	0	-164	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438493	59474714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19423_5	chr14	+	3942	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438634	59474714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19424_25	chr14	+	3888	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438688	59474714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19428_4	chr14	+	3765	12	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	34	2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	92.2668605389769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59438724	59474716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59439034_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
Isoform_19429_3	chr14	+	1537	12	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-4	-1555	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	121.129873610896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCCTGTGATTGCTTAT	NA	False	NA	5	True	AATATA	-11	NA	59678416	59784797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59678468_59696542_59696691_59699083_59699152_59715480_59715523_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_19430_3	chr14	+	3080	12	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	121.129873610896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	59678429	59786353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59678468_59696542_59696691_59699083_59699152_59715480_59715523_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_19431_100	chr14	+	3038	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	0	-1	0	1	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	59678429	59786353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_19434_5	chr14	+	1489	11	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	-1552	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	93.0002150535148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGATTGCTTATGGA	NA	False	NA	8	True	AATATA	-14	NA	59678429	59784800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59678472_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_19435_3	chr14	+	3040	11	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	124.300603377458	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678429	59786352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_59678472_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737157_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
Isoform_19439_76	chr14	+	3116	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	2	1	2	-1	multi-exon	TRUE	canonical	3	42	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCGGGGAATGCTTAT	NA	False	NA	4	True	AATAAA	-16	NA	59862758	59869108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_59863850_59867083
Isoform_19441_21	chr14	+	3779	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	30	4	-15	-4	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTGAGTGTTTTTC	NA	False	NA	5	True	ATTAAA	-9	NA	60502706	60539815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
Isoform_19443_3	chr14	+	4055	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	0	89	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGAATAGTCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	60940401	61000204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
Isoform_19444_471	chr14	+	2388	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	9	618	0	-618	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTCTCACCTGCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	61022030	61141060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
Isoform_19448_35	chr14	+	1630	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-13	2	-13	-2	multi-exon	FALSE	canonical	3	46	junction_1	100	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61835682	61843393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_61835796_61837242_61837345_61841978
Isoform_19450_18	chr14	+	1551	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	-3	2	-3	-2	multi-exon	FALSE	canonical	3	148	junction_1	49	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61836985	61843393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_61837020_61837242_61837345_61841978
Isoform_19452_4	chr14	+	1539	2	ISM	ENSMUSG00000021932.14	ENSMUST00000169728.2	628	8	-32	16078	25	-5536	5prime_fragment	FALSE	canonical	3	753	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAATGGAAAATC	NA	False	NA	NA	False	NA	NA	NA	62569541	62585471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_62569626_62584016
Isoform_19455_194	chr14	+	980	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	489	25	-489	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569541	62609952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_19457_10	chr14	+	1472	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	25	-3	25	3	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATAGTTTTGTTGCTTTT	NA	False	NA	8	True	AATAAA	-20	NA	62569541	62610444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_19459_5	chr14	+	1004	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	1	489	1	-489	multi-exon	TRUE	canonical	3	538	junction_2	112.951139879153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569517	62609952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_1946_9	chr10	-	2954	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198126	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
Isoform_19461_88	chr14	+	872	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-489	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAAACTTGCCTCTTGC	NA	False	NA	7	True	AATAAA	-16	NA	62569541	62609952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_19463_7	chr14	+	1357	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCATAGTTTTGTTGC	NA	False	NA	4	True	AATAAA	-16	NA	62569544	62610440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
Isoform_19465_4	chr14	+	2394	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	14	4238	14	-4238	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTAGTTTCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	63075140	63194720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
Isoform_19466_7	chr14	+	650	3	FSM	ENSMUSG00000054763.10	ENSMUST00000067990.8	618	3	-41	9	-41	-9	multi-exon	FALSE	canonical	3	33	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATAAATTTCCCGTTTC	NA	False	NA	19	True	AATAAA	-28	NA	63284398	63286050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63284500_63284892_63285068_63285676
Isoform_19472_4942	chr14	+	1919	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	55	2769	3	1291	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	4942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359965	63380603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_19475_86	chr14	+	3508	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	54	1181	2	-1181	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAGTGGAACTTGGGG	NA	False	NA	4	True	TATAAA	-14	NA	63359964	63382191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_19476_99	chr14	+	1989	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	-12	2766	-12	1294	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGCAGTTTCAAGGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	63359898	63380606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
Isoform_1948_15	chr10	-	2897	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	71.1213751273132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198391	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
Isoform_19487_3	chr14	+	4104	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	121	6	106	-6	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAGATATCCAAATAGA	NA	False	NA	NA	False	AATAAA	-10	NA	63673963	63702941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
Isoform_19489_29	chr14	+	1336	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	-44	3	-44	-3	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCTGAGCCTTTCACA	4043	False	NA	NA	False	AATAAA	-36	NA	64097768	64157301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
Isoform_19491_5	chr14	+	686	2	FSM	ENSMUSG00000060012.10	ENSMUST00000224507.2	3045	2	2	2357	2	-2357	multi-exon	FALSE	canonical	3	66	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAGAGAAAGAGGGGA	NA	False	NA	NA	False	AATATA	-4	NA	64889992	64907645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_64890106_64907072
Isoform_19493_5	chr14	+	1727	16	ISM	ENSMUSG00000060012.10	ENSMUST00000100473.5	5603	40	-21	59985	-21	21551	5prime_fragment	FALSE	canonical	2	40	junction_3	12.3151216892982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAGCAGA	NA	False	NA	NA	False	TTTAAA	-40	NA	64889958	64983760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747
Isoform_19494_166	chr14	+	2407	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	264	3	-4	-3	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCCAGTTCTATTGC	NA	False	NA	14	True	AATAAA	-14	NA	65187757	65277278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
Isoform_19496_11	chr14	+	2669	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	0	5	0	-5	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCCCAGTTCTATT	NA	False	NA	12	True	AATAAA	-12	NA	65187493	65277276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
Isoform_19497_5	chr14	+	1299	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	19	2463	-18	7	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAAGGTCCTGCGAGTT	2557	False	NA	NA	False	ATTAAA	-24	NA	65504085	65558957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
Isoform_19499_5	chr14	+	4221	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-36	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	29.0282620905903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTAGTGTGTGCCTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	65596088	65636376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634359_65634399
Isoform_1950_7	chr10	-	2841	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	66.9842435867487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198098	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
Isoform_19500_3	chr14	+	2327	10	FSM	ENSMUSG00000034522.11	ENSMUST00000066994.7	4229	10	-108	2010	34	170	multi-exon	FALSE	canonical	3	41	junction_1	17.4171761399877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTTTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	65596016	65634369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
Isoform_19501_8	chr14	+	4296	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.0282620905903	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596023	65636379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_19503_8	chr14	+	4192	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.8229075563171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTAGTGTGTGCCTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	65596122	65636377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634339_65634372
Isoform_19505_24	chr14	+	3754	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	34	6	0	-6	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGTTGCTGATAAGT	852	False	NA	NA	False	AATAAA	-13	NA	65903885	66002269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
Isoform_19506_4	chr14	+	3549	8	NIC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	64	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.8172541453592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGATAAGTGGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	65913989	66002274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_65914208_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
Isoform_19509_127	chr14	+	1669	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	51	0	-49	0	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043336	66055271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
Isoform_1951_3	chr10	-	1552	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-344	3762	-336	-2694	multi-exon	FALSE	canonical	3	8	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACTAATGTATTTTGT	2024	False	NA	NA	False	ATTAAA	-11	NA	115220684	115208070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115208852_115212256_115212453_115220109
Isoform_19513_25	chr14	+	1491	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCAGCATTATCTGTTT	NA	False	NA	23	True	AATAAA	-39	NA	66043680	66055269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
Isoform_19516_38	chr14	+	2168	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	60	2	2	-2	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCATTGATATCTGAAT	NA	False	NA	29	True	AATAAA	-18	NA	66074810	66104054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
Isoform_19518_17	chr14	+	1647	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	161	2	2	-2	multi-exon	FALSE	canonical	3	13	junction_1	2.72717802865893	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTTGGGTCTGTTTTT	NA	False	NA	11	True	AATAAA	-18	NA	66206092	66218994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
Isoform_19519_3	chr14	+	1785	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	19	6	19	-6	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTCCCTTGGGTCTGT	NA	False	NA	7	True	AATAAA	-14	NA	66205950	66218990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
Isoform_19520_209	chr14	+	3649	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	24	5	-11	-5	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTGAGTTGTTTTTTA	NA	False	NA	26	True	NA	NA	NA	66534503	66548868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
Isoform_19523_16	chr14	+	2282	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	67	3169	-5	-961	multi-exon	FALSE	canonical	3	15	junction_1	6.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	67148685	67155303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_67148743_67152770_67152900_67153207
Isoform_19526_19	chr14	+	2994	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-1	-1691	-1	-1	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953709	67979609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_19527_5	chr14	+	3081	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-88	-1691	23	-1	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGTTTCTGCTCTTGC	NA	False	NA	9	True	AATAAA	-21	NA	67953622	67979609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
Isoform_19528_10	chr14	+	2815	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	190	152	3	-3	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCTGTTTCTGCTCTT	NA	False	NA	7	True	AATAAA	-19	NA	67953736	67979607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
Isoform_19529_5	chr14	+	2931	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	75	151	22	-2	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953621	67979608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
Isoform_19531_80	chr14	+	2175	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	0	1205	0	-1205	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTGTGGTTTTTAC	NA	False	NA	14	True	AATAAA	-28	NA	68321311	68325339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_19534_9	chr14	+	3427	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-54	7	-54	-7	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAATGGGTGTGCAGTC	NA	False	NA	5	True	AATAAA	-19	NA	68321257	68326537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_19537_18	chr14	+	2222	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-47	1205	-47	-1205	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTGTGGTTTTTAC	NA	False	NA	14	True	AATAAA	-28	NA	68321264	68325339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
Isoform_1954_12	chr10	-	2786	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	93	junction_16	168.781466973569	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417405	116321072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
Isoform_19540_3	chr14	+	2049	8	ISM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-18	9188	-18	7749	5prime_fragment	FALSE	canonical	3	166	junction_5	13.6561266806649	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAACCAGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	69792854	69813781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693
Isoform_19541_55	chr14	+	3015	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	-13	587	-13	467	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACTTGACATTTTAA	7288	False	NA	NA	False	AATAAA	-13	NA	69574609	69604132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
Isoform_19542_81	chr14	+	2984	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-6	467	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACTTGACATTTTAA	7295	False	NA	NA	False	AATAAA	-13	NA	69574616	69604132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
Isoform_19545_3	chr14	+	2214	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	-36	1411	-36	120	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCTGCTGTCTGGAG	7265	False	NA	NA	False	NA	NA	NA	69574586	69603308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
Isoform_19546_82	chr14	+	2971	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	7	467	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7614711414806	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACTTGACATTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	69792879	69822382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
Isoform_19547_10	chr14	+	1849	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	13	1317	0	420	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCCACTGCTGTTTAC	NA	False	NA	NA	False	AATAAA	-29	NA	70004933	70020543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
Isoform_19548_5	chr14	+	2302	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	12	865	-1	-865	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCCCTATGCCCTCCC	NA	False	NA	NA	False	NA	NA	NA	70004932	70020995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
Isoform_19550_5	chr14	+	3165	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	False	NA	-4	True	NA	NA	NA	70004935	70021852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680
Isoform_19551_33	chr14	+	1486	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	33	248	0	-248	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAGTGTACTTTAAC	NA	False	NA	NA	False	AGTAAA	-12	NA	70337586	70375407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
Isoform_19552_3	chr14	+	1463	8	NIC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	-5	-250	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	26.9602882561953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAACAGTGTACTTTA	NA	False	NA	NA	False	AGTAAA	-10	NA	70337566	70375405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_70337646_70356052_70356102_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
Isoform_19553_10	chr14	+	1677	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-125	13	-22	-13	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCTCCTAATTTGT	6442	False	NA	17	True	AATAAA	-13	NA	70782668	70786360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
Isoform_19554_49	chr14	+	1603	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-39	1	-39	-1	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTCTTCACATCT	6528	False	NA	29	True	AATAAA	-25	NA	70782754	70786372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
Isoform_19555_13	chr14	+	2865	12	ISM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	7598	3	7598	-3	3prime_fragment	FALSE	canonical	2	7	junction_11	3.66804381851491	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAACATCTGTTCCGAG	NA	False	NA	NA	False	AATAAA	-14	NA	70800937	70810981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
Isoform_19556_4	chr14	+	2739	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	222	965	12	-965	multi-exon	FALSE	canonical	3	39	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGTGCTGTGGGTT	NA	False	NA	NA	False	AATGAA	-16	NA	70815298	70819046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70815551_70816351_70816566_70816773
Isoform_19557_13	chr14	+	1415	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	217	2294	7	-4	multi-exon	FALSE	canonical	3	39	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTGCTTGCCTA	NA	False	NA	NA	False	AGTAAA	-11	NA	70815293	70817717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_70815551_70816351_70816566_70816773
Isoform_19558_3	chr14	+	2190	16	FSM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	-103	1535	4	1	multi-exon	FALSE	canonical	1	2	junction_5	12.7774106227444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380435	73420123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_19559_26	chr14	+	2161	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCATTGACGAACA	NA	False	NA	NA	False	NA	NA	NA	73380406	73420123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
Isoform_19563_158	chr14	+	1332	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	-4	0	4	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCAATTTTTTAAA	NA	False	NA	19	True	AATAAA	-21	NA	73747464	73755989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
Isoform_19564_23	chr14	+	1605	8	NNC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	122.246655978637	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	73747464	73756289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333_73755598_73755624
Isoform_19566_6	chr14	+	2299	6	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	317	junction_5	16.1170716943246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTTTCAATTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	73747464	73755987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
Isoform_19568_88	chr14	+	2105	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	125	-1	24	1	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGTTATGGGTTTTT	NA	False	NA	12	True	AATAAA	-15	NA	73790229	73833583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_19569_336	chr14	+	1599	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	133	497	32	-138	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACGGTGGTCTCTTTT	NA	False	NA	12	True	TATAAA	-15	NA	73790237	73833085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_19571_14	chr14	+	1445	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	5	-138	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACGGTGGTCTCTTTT	NA	False	NA	12	True	TATAAA	-15	NA	73790210	73833085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
Isoform_19573_1038	chr14	+	1012	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	67	909	7	8	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATTTTACCACCAT	NA	False	NA	21	True	AATAAA	-22	NA	74969803	74987296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
Isoform_19574_17	chr14	+	1041	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	30	917	6	0	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969766	74987288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
Isoform_19577_25	chr14	+	1131	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	-6	-8	-6	8	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATTTTACCACCAT	NA	False	NA	21	True	AATAAA	-22	NA	74969817	74987296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
Isoform_19579_5	chr14	+	3439	16	ISM	ENSMUSG00000021998.17	ENSMUST00000145303.8	3841	17	40535	39	659	-13	3prime_fragment	TRUE	canonical	2	7	junction_1	5.24679796532027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCTTTCCGAATAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	75414306	75468243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
Isoform_1958_21	chr10	-	3218	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-348	0	intron_retention	FALSE	canonical	3	100	junction_15	145.637593339598	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417764	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
Isoform_19586_5	chr14	+	2721	12	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-29	16575	-16	6010	5prime_fragment	FALSE	canonical	3	74	junction_1	17.8339447901147	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAGAGGGAGCGAGA	NA	False	NA	83	True	NA	NA	NA	75521796	75565291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983
Isoform_1959_50	chr10	-	2858	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_15	145.637593339598	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
Isoform_19591_3	chr14	+	2754	12	ISM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	-52	16575	-52	6010	5prime_fragment	FALSE	canonical	3	23	junction_1	28.9073755923357	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAGAGGGAGCGAGA	NA	False	NA	83	True	NA	NA	NA	75521760	75565291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983
Isoform_19594_1170	chr14	+	844	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	209	116	0	2	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAACTCTTTGCTGTGA	1047	False	NA	6	True	AATAAA	-17	NA	76082741	76085739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
Isoform_19595_142	chr14	+	889	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	163	117	-46	1	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1001	False	NA	5	True	AATAAA	-16	NA	76082695	76085738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
Isoform_19598_13	chr6	-	505	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	211	-197	211	197	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTTCAGAAT	NA	False	NA	-9	True	AATAAA	-16	NA	99855084	99854579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_99854600_99855100
Isoform_19603_211	chr14	+	1660	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	20	2294	20	-2294	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTGTGTCTGTGTCA	NA	False	NA	23	True	AATAAA	-19	NA	76348350	76372525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
Isoform_19609_1900	chr14	+	1724	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	36	2	-16	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	1900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6575	False	NA	29	True	AATAAA	-19	NA	76741953	76745203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_76742282_76742688_76742738_76743856
Isoform_19618_3	chr14	+	2778	3	ISM	ENSMUSG00000058997.9	ENSMUST00000227676.2	3823	5	-27	5096	-27	-5096	5prime_fragment	FALSE	canonical	3	64	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAACCAAA	9319	False	NA	NA	False	NA	NA	NA	79086604	79147983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_79086884_79106218_79106297_79145562
Isoform_19619_3	chr14	+	2031	13	ISM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-39	82493	23	24490	5prime_fragment	FALSE	canonical	2	44	junction_4	6.8246896551337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTGCTTATTTCAC	9369	False	NA	NA	False	AATAAA	-18	NA	79086654	79220215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675
Isoform_19621_33	chr14	+	3473	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-65	-2	-3	2	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCCGTCCTTTTGTT	9343	False	NA	5	True	AATAAA	-21	NA	79086628	79302710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
Isoform_19622_21	chr14	+	1800	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	3	-4	3	4	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCTACAGAGTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	79635214	79661031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
Isoform_19624_3	chr14	+	1276	6	ISM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-15	13214	-15	-13214	5prime_fragment	FALSE	canonical	3	19	junction_5	3.286335345031	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAATAAAGATGGG	NA	False	NA	NA	False	NA	NA	NA	79718618	79806720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660
Isoform_19631_39	chr14	+	2903	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	86	4403	-32	1816	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGAGTTTTCATATCT	NA	False	NA	28	True	AATAAA	-21	NA	79825216	79868233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19632_8	chr14	+	2982	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	12	4398	12	1821	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCATATCTGATAT	NA	False	NA	33	True	AATAAA	-26	NA	79825142	79868238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19633_268	chr14	+	1090	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	83	6219	-35	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825213	79866417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19635_45	chr14	+	1125	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	48	6219	48	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825178	79866417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19637_8	chr14	+	1204	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	-31	6219	-31	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825099	79866417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19639_7	chr14	+	1124	12	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	16	-1	intron_retention	FALSE	canonical	3	1684	junction_7	89.8103603513886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCGTGTGTTCGAGAGA	NA	False	NA	29	True	AATAAA	-18	NA	79825264	79866415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
Isoform_19641_28	chr14	+	2656	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	0	1	0	1	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGGTTCACTTGT	NA	False	NA	6	True	AATAAA	-20	NA	87654074	87782939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
Isoform_19644_13	chr14	+	917	2	FSM	ENSMUSG00000022070.8	ENSMUST00000226823.2	1071	2	155	-1	0	1	multi-exon	FALSE	canonical	3	218	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	AATAAA	-45	NA	99283812	99285349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99284117_99284736
Isoform_19647_3	chr14	+	2210	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	-130	646	25	-645	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGCTTGTTTAACAAGT	NA	False	NA	15	True	AATAAA	-19	NA	99283682	99311330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_19648_145	chr14	+	2682	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	44	0	-33	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283856	99311976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_19649_7	chr14	+	2278	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	13	435	13	-434	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTAAAATGGACTCCCT	NA	False	NA	-1	True	TATAAA	-17	NA	99283825	99311541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_19650_3	chr14	+	2032	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	0	-647	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	96.6821596779882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGGCTTGTTTAACAA	NA	False	NA	13	True	AATAAA	-17	NA	99283812	99311328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_99284117_99284736_99284905_99287428_99287536_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_19651_4	chr14	+	2534	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	97.5676688252825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTCGTTTTCCTTGTTC	NA	False	NA	2	True	AATAAA	-13	NA	99283833	99311973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_99284117_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
Isoform_19653_10	chr14	+	2820	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-22	-1	-22	1	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTGTAGAGTTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	99337320	99491930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
Isoform_19659_85	chr14	+	3347	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-3	8	-3	-8	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGTGGTGCCTT	NA	False	NA	14	True	AATAAA	-10	NA	99536123	99552464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
Isoform_1966_37	chr10	-	2730	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	12	-622	1	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
Isoform_19675_16	chr14	+	1185	5	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-5	28364	-5	-61	5prime_fragment	FALSE	canonical	3	4015	junction_1	248.252895249985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTCTCGTTTTCACT	112	False	NA	NA	False	AGTAAA	-18	NA	101891424	101905197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427
Isoform_19677_12	chr14	+	1096	10	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	1788.13434742595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	116	False	NA	22	True	AATAAA	-18	NA	101891428	101933561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
Isoform_19678_917	chr14	+	883	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	20	0	-2	0	multi-exon	FALSE	canonical	3	3225	junction_5	471.372729376658	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	137	False	NA	22	True	AATAAA	-18	NA	101891449	101933561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
Isoform_1968_14	chr10	-	3079	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-337	-622	-337	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417753	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
Isoform_19682_15	chr14	+	833	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	164	junction_5	1503.09389770105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGTTGTTTTTGCT	137	False	NA	20	True	AATAAA	-16	NA	101891449	101933559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
Isoform_19683_43	chr14	+	907	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-6	2	-6	-1	multi-exon	FALSE	canonical	3	3225	junction_5	471.372729376658	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGTTGTTTTTGCT	111	False	NA	20	True	AATAAA	-16	NA	101891423	101933559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
Isoform_19686_86	chr14	+	2349	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	87	9	87	-9	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCAGGGCTTGCATC	NA	False	NA	-3	True	NA	NA	NA	103307738	103315055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_19687_24	chr14	+	2414	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	27	4	27	-4	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTTGCATCTTGTA	NA	False	NA	2	True	NA	NA	NA	103307678	103315060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_19688_4	chr14	+	3029	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	102	-686	102	686	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAATTAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	103307753	103315750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
Isoform_19690_4	chr14	+	3015	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-421	-596	-3	-1	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAGCTCACGCATGAAT	NA	False	NA	26	True	AATAAA	-16	NA	103887660	103942342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_19691_6	chr14	+	2909	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-423	-488	-5	-4	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCATTTGCACTAATG	NA	False	NA	-82	True	AATAAA	-23	NA	103887658	103942234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_19692_18	chr14	+	2863	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	5	-5	5	5	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACGCATGAATGTGCAG	NA	False	NA	32	True	AATAAA	-22	NA	103887668	103942348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_19693_3	chr14	+	2776	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-23	110	-23	-5	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCATTTGCACTAAT	NA	False	NA	-83	True	AATAAA	-22	NA	103887640	103942233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
Isoform_19694_17	chr14	+	1890	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	145	497	-35	-2	multi-exon	TRUE	canonical	3	271	junction_7	54.1807255433901	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTACAATCATTTTTC	NA	False	NA	-64	True	AATAAA	-15	NA	105496152	105546235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_19695_38	chr14	+	2358	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	173	1	-7	-1	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTATTTCTTGTAT	NA	False	NA	9	True	AATAAA	-16	NA	105496180	105546731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_19697_42	chr14	+	1905	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	199	428	19	-1	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGCCTCGTTTAGTGAT	NA	False	NA	5	True	AATAAA	-15	NA	105496206	105546304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_19699_14	chr14	+	1958	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	151	423	-29	4	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCGTTTAGTGATTCCAA	NA	False	NA	10	True	AATAAA	-20	NA	105496158	105546309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
Isoform_19704_13	chr14	+	2135	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-16	-424	-16	-3	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTTGTATTTCTTGT	NA	False	NA	7	True	AATAAA	-14	NA	105496171	105546729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
Isoform_19708_4	chr14	+	2406	9	FSM	ENSMUSG00000058571.12	ENSMUST00000078849.12	1668	9	-421	-317	-16	-3	multi-exon	FALSE	canonical	0	0	junction_1	3.09989919190931	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGGGGTTTTGGTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	117162926	118212815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_117163508_117424073_117424233_117673063_117673456_117861796_117861963_118107764_118107896_118125933_118126078_118188549_118188687_118202110_118202287_118212295
Isoform_19709_165	chr14	+	1892	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	-19	2	-19	-2	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374550	118400671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_1971_229	chr10	-	2798	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	3	-1	-1	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417402	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_19710_7	chr14	+	1844	8	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.9044399246616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGAATTAGCATTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	118374546	118400669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_19711_24	chr14	+	1847	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	53.8678939629164	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374570	118400671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
Isoform_19718_10	chr14	+	1690	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-43	3494	-43	-3494	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCTTTATTATTATTTT	2286	False	NA	23	True	ATTAAA	-19	NA	119175344	119215615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
Isoform_19719_7	chr14	+	5168	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-23	-4	-23	4	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGCTTCTTATTCATG	2306	False	NA	19	True	AATAAA	-21	NA	119175364	119219113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
Isoform_19723_3	chr14	+	4547	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	0	5	0	-3	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTGTGTTGCGGTCT	6829	False	NA	2	True	AATAAA	-12	NA	120513080	120669104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
Isoform_19724_19	chr14	+	2482	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	0	2070	0	1	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTTTGC	6829	False	NA	NA	False	NA	NA	NA	120513080	120667039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
Isoform_19726_10	chr14	+	1258	3	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-76	-2985	at_least_one_novel_splicesite	FALSE	non_canonical	3	46	junction_1	28	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAGGAGAAA	NA	False	NA	-24	True	ATTAAA	-17	NA	120715779	120741621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_120715999_120716022_120716453_120741012
Isoform_19727_22	chr14	+	1185	3	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-3	-2985	at_least_one_novel_splicesite	FALSE	non_canonical	3	46	junction_1	28	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAGGAGAAA	NA	False	NA	-24	True	ATTAAA	-17	NA	120715852	120741621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_120715999_120716022_120716453_120741012
Isoform_1973_19	chr10	-	3159	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-358	-1	-347	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417763	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_19731_83	chr14	+	4609	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-55	-36	-55	36	multi-exon	TRUE	canonical	3	890	junction_17	126.92017018583	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTGAAAATGAAATGGA	1776	False	NA	52	True	ATTAAA	-15	NA	121148580	121185447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
Isoform_19735_176	chr14	+	3968	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-41	591	-41	-10	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAAGAGGCCTGTGTA	1790	False	NA	8	True	AATAAA	-10	NA	121148594	121184820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
Isoform_19742_5	chr14	+	4910	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-23	-2	-23	2	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCTCTTTGTG	NA	False	NA	37	True	NA	NA	NA	121272952	121521158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_19745_328	chr14	+	2155	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-15	-1	-15	1	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8871	False	NA	17	True	AATAAA	-17	NA	122116016	122258447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_19746_27	chr14	+	2178	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-38	-1	-38	1	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8848	False	NA	17	True	AATAAA	-17	NA	122115993	122258447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_19751_15	chr14	+	2116	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-20	5	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGTTTTTATACTTCT	8866	False	NA	21	True	AATAAA	-21	NA	122116011	122258451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
Isoform_19753_8	chr14	+	1717	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	61	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCAGTAGTTTTTAT	2071	False	NA	15	True	AATAAA	-15	NA	122183786	122258445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
Isoform_19757_25	chr14	+	902	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	-11	22	-11	-22	multi-exon	FALSE	canonical	3	25	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATATTTAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122272074	122275810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122272425_122275258
Isoform_19758_53	chr14	+	2807	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	28	272	28	-272	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTATCACTCCCTG	NA	False	NA	30	True	AATAAA	-15	NA	122344477	122396744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_19759_273	chr14	+	2784	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	51	272	-49	-272	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTATCACTCCCTG	NA	False	NA	30	True	AATAAA	-15	NA	122344500	122396744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_19761_22	chr14	+	3057	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	50	0	50	0	multi-exon	FALSE	canonical	3	817	junction_12	125.603480743967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCAAAGTGTAGTAATT	NA	False	NA	18	True	ATTAAA	-20	NA	122344499	122397016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_19762_16	chr14	+	2268	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	0	839	0	49	multi-exon	TRUE	canonical	3	817	junction_12	125.603480743967	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGACCTGTTTTGTGAC	NA	False	NA	10	True	AATAAA	-15	NA	122344449	122396177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
Isoform_19767_9	chr14	+	1669	3	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	8	29582	8	-29575	5prime_fragment	FALSE	canonical	3	648	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122419123	122610064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_122419194_122548655_122548843_122608652
Isoform_19768_4	chr14	+	960	5	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	9	24038	9	-24031	5prime_fragment	FALSE	canonical	3	648	junction_1	14.6180539060437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTATGGGGTCTACT	NA	False	NA	13	True	AATAAA	-26	NA	122419124	122615608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195
Isoform_19769_89	chr14	+	1220	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	12	-1	12	1	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGGTTTTGCTATTGTC	NA	False	NA	13	True	AATAAA	-23	NA	122419127	122639647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_1977_13	chr10	-	3212	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-411	-1	-400	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417816	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_19770_6	chr14	+	1029	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	249.458357691664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122419127	122639643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_122419194_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_19774_11	chr14	+	2107	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	-58	391	-58	-391	multi-exon	FALSE	canonical	2	3	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACTGAAAACATAAAAAA	600	False	NA	NA	False	AAGAAA	-40	NA	122712788	122716873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122714160_122715951_122716116_122716301
Isoform_19775_3	chr14	+	2737	3	NNC	ENSMUSG00000061524.9	novel	2440	3	NA	NA	-687	-389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGAAAACATAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-42	NA	122712159	122716875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_122714159_122715951_122716116_122716301
Isoform_19776_157	chr14	+	2482	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-8	118	0	1	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTAGTTTGCCCTTTTT	NA	False	NA	14	True	AATAAA	-17	NA	122771742	123127238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_19777_11	chr14	+	2371	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	27.256245019481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTAGTTTGCCCTTTTT	NA	False	NA	14	True	AATAAA	-17	NA	122771742	123127238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_19778_5	chr14	+	2429	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	29.4392847671832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTAGTTTGCCCTTTTTT	NA	False	NA	15	True	AATAAA	-18	NA	122771742	123127239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
Isoform_19780_102	chr14	+	479	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	-38	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	46321484	46322419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_46321631_46322086
Isoform_19782_4	chr14	+	1125	2	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8672	False	NA	NA	False	AATAAA	-16	NA	41146550	41148274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_41146812_41147410
Isoform_19783_30	chr14	+	915	2	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8882	False	NA	NA	False	AATAAA	-16	NA	41146760	41148274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_41146812_41147410
Isoform_19784_3	chr14	+	3894	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3067	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGCCTGTTTACTGT	8213	False	NA	4	True	AATAAA	-14	NA	34100744	34126242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
Isoform_19786_11	chr14	+	1250	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19443	-3	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122514895	122639643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
Isoform_19789_11	chr14	+	2745	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11517	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCACCTGTGTCTTC	NA	False	NA	29	True	AATAAA	-42	NA	121503836	121521150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_19790_5	chr14	+	1840	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11494	-934	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCCAATCTTTCTA	NA	False	NA	25	True	AGTAAA	-22	NA	121503813	121520222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
Isoform_19793_6	chr14	+	1031	3	Antisense	novelGene_ENSMUSG00000090481.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATGATCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	42300584	42317528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_42300714_42304885_42305330_42317070
Isoform_19796_7	chr14	+	1035	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGATCCATTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	41085319	41102275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_41085450_41089611_41090056_41101814
Isoform_19797_7	chr14	+	1657	3	NNC	ENSMUSG00000035235.14	novel	1550	3	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGAGTTTGTGCTG	NA	False	NA	16	True	AATAAA	-14	NA	61837013	61843393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_61837154_61837242_61837345_61841978
Isoform_19798_4	chr14	+	1076	8	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	20067	-21	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.4094640101991	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGACTTTCTATATAA	6283	False	NA	NA	False	AATAAA	-14	NA	65862782	65885872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_65862807_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65878797_65879306_65879444_65882458_65882550_65885619
Isoform_19801_3	chr14	+	4071	24	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-263	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5956194011477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAAGTGTCATTGTGGC	NA	False	NA	4	True	AGTAAA	-13	NA	56602261	56626006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_+_56602417_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
Isoform_19804_4	chr14	-	811	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4006099	4005288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_4005300_4006100
Isoform_19805_4	chr14	+	202	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGGTGTGGCCTTG	571	False	NA	NA	False	NA	NA	NA	63748891	63749093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_63748900_63749100
Isoform_19808_3	chr14	-	2731	1	NIC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	2	12939	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATTAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	64678364	64675633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_64675600_64678400
Isoform_19809_7	chr14	+	3222	1	FSM	ENSMUSG00000092972.3	ENSMUST00000175231.3	87	1	-453	-2682	-453	2682	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCAAGACCCATCTATA	NA	False	NA	13	True	AATAAA	-13	NA	64828180	64831402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_64828200_64831400
Isoform_19810_3	chr14	+	1287	1	NIC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	0	-59201	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65187761	65189048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_65187800_65189000
Isoform_19811_3	chr14	-	1972	1	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	-67559	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATTAAATTAAACCA	NA	False	NA	NA	False	TTTAAA	-28	NA	14651761	14649789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_14649800_14651800
Isoform_19812_125	chr14	+	1053	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	66534514	66535567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_66534500_66535600
Isoform_19814_3	chr14	+	179	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCTATA	NA	False	NA	NA	False	NA	NA	NA	70427586	70427765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_70427600_70427800
Isoform_19815_3	chr14	-	2962	1	Genic_Genomic	ENSMUSG00000022092.12	novel	NA	NA	NA	NA	-24	-63557	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAGAAAAAGAAAAAGAAA	9162	False	NA	NA	False	NA	NA	NA	70526944	70523982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_70524000_70526900
Isoform_19816_3	chr14	-	173	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	7320	False	NA	NA	False	NA	NA	NA	70628637	70628464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_70628500_70628600
Isoform_19818_13	chr14	-	178	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	71008524	71008346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_71008300_71008500
Isoform_19819_5	chr14	-	1288	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	73426101	73424813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_73424800_73426100
Isoform_19821_8	chr2	+	429	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGGGTTTAAAGTC	1069	False	NA	NA	False	NA	NA	NA	143991091	143991520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_143991100_143991500
Isoform_19822_19	chr14	+	179	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAACTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	73681858	73682037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_73681900_73682000
Isoform_19823_5	chr14	+	1450	1	FSM	ENSMUSG00000022109.7	ENSMUST00000226256.2	1455	1	-7	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTTGATACTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73747464	73748914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_73747500_73748900
Isoform_19824_14	chr14	-	191	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAAGGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	73820499	73820308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_73820300_73820500
Isoform_19825_6	chr14	+	176	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTAGAGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	73923064	73923240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_73923100_73923200
Isoform_19826_3	chr14	-	1029	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	74192389	74191360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_74191400_74192400
Isoform_19827_4	chr14	-	177	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	75145809	75145632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_75145600_75145800
Isoform_19829_5	chr14	-	2093	1	Genic_Genomic	ENSMUSG00000085829.2	novel	NA	NA	NA	NA	-976	-469	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAATTAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76083380	76081287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_76081300_76083400
Isoform_19830_5	chr14	+	182	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	76097990	76098172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_76098000_76098200
Isoform_19831_3	chr14	-	1339	1	Genic_Genomic	ENSMUSG00000067995.5	novel	NA	NA	NA	NA	-32	-112622	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76248337	76246998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_76247000_76248300
Isoform_19833_8	chr14	-	506	1	FSM	ENSMUSG00000095427.3	ENSMUST00000095471.6	855	1	394	-45	394	45	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	AATAAA	-19	NA	76474591	76474085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_76474100_76474600
Isoform_19835_3	chr14	-	1778	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGAAGAAACATGGTA	NA	False	NA	NA	False	AAAAAG	-21	NA	76732490	76730682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_-_76731465_76731494
Isoform_1984_9	chr10	-	2605	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_13	166.140093331637	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417402	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
Isoform_19842_4	chr14	-	176	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGCGCCA	NA	False	NA	NA	False	NA	NA	NA	18447082	18446906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_18446900_18447100
Isoform_19843_6	chr14	+	1312	1	Antisense	novelGene_ENSMUSG00002076975.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	77777148	77778460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_77777100_77778500
Isoform_19844_3	chr14	-	167	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCCCCATAG	NA	False	NA	NA	False	NA	NA	NA	77811152	77810985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_77811000_77811200
Isoform_19845_6	chr14	-	674	1	NIC	ENSMUSG00000022013.5	novel	674	5	NA	NA	-7	-47913	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	78112373	78111699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_78111700_78112400
Isoform_19846_3	chr14	-	172	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAAAAAAAAG	7593	False	NA	NA	False	NA	NA	NA	79634552	79634380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_79634400_79634600
Isoform_19847_3	chr14	+	3008	1	FSM	ENSMUSG00000075502.3	ENSMUST00000100359.3	2982	1	-27	1	-27	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCAGAGTTCGTATGG	NA	False	NA	NA	False	NA	NA	NA	79689247	79692255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_79689200_79692300
Isoform_1985_38	chr10	-	2672	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	14	7	-1	-2	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417402	116321072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
Isoform_19852_8	chr14	-	664	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	-25	153	-25	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTTAAAATGCTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	88361269	88360605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_88360600_88361300
Isoform_19854_14	chr14	-	2483	1	NIC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-17991	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGCAGGAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90322672	90320189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_90320200_90322700
Isoform_19855_3	chr14	-	1013	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATGGAAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	93452652	93451639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_93451600_93452700
Isoform_19856_3	chr14	-	1086	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATGGAAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	93452725	93451639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_93451600_93452700
Isoform_19863_62	chr14	-	249	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	184	16	184	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACCTGAAAAAAATTAT	NA	False	NA	-17	True	ATTAAA	-11	NA	99231570	99231321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_99231300_99231600
Isoform_19865_5	chr14	+	1493	1	FSM	ENSMUSG00000022070.8	ENSMUST00000228082.2	881	1	-33	-579	-33	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	AATAAA	-45	NA	99283856	99285349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_99283900_99285300
Isoform_19866_11	chr14	+	1683	1	Genic_Genomic	ENSMUSG00000005148.9	novel	NA	NA	NA	NA	-3	-4956	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAAGAGAAAG	NA	False	NA	NA	False	GGGGCT	-36	NA	99536123	99537806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_+_99536100_99537800
Isoform_19875_13	chr14	-	302	1	Antisense	novelGene_ENSMUSG00000005148.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	99552467	99552165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_-_99552200_99552500
Isoform_19876_13	chr14	+	177	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGACACCCTGA	NA	False	NA	NA	False	NA	NA	NA	101857572	101857749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_101857600_101857700
Isoform_19877_3	chr2	+	179	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	92141928	92142107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_92141900_92142100
Isoform_19878_11	chr14	-	814	1	FSM	ENSMUSG00000115584.2	ENSMUST00000226515.2	773	1	-4	-37	-4	37	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-44	NA	102220203	102219389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_102219400_102220200
Isoform_19880_5	chr14	+	841	1	Antisense	novelGene_ENSMUSG00000022124.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTGCATTTCCATTT	NA	False	NA	NA	False	AATAAA	-42	NA	103336541	103337382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_103336500_103337400
Isoform_19881_54	chr14	-	595	1	ISM	ENSMUSG00000033004.17	ENSMUST00000162537.2	3495	3	4	34521	4	-34521	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTCCCGGGCGCCCT	NA	False	NA	NA	False	NA	NA	NA	103584246	103583651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_103583700_103584200
Isoform_19885_5	chr14	+	3094	1	FSM	ENSMUSG00000022113.7	ENSMUST00000022708.7	3075	1	28	-47	27	47	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAGATTGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	106343659	106346753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_106343700_106346800
Isoform_19888_56	chr14	-	5237	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	112608909	112603672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_112603700_112608900
Isoform_19889_4	chr14	-	5307	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	112608977	112603670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_112603700_112609000
Isoform_1989_8	chr10	-	2730	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	145.213635723371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417401	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116363731_116363855_116384937_116385081_116417357
Isoform_19899_277	chr14	+	2090	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	12	45	12	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GATCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	113552051	113554141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_113552100_113554100
Isoform_199_13	SIRV12001	+	2352	1	FSM	SIRV12001A	SIRV12001	12029	1	0	9677	0	-9677	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGGTAATCTGTTT	NA	False	NA	NA	False	NA	NA	NA	0	2352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12001_+_0_2400
Isoform_19905_6	chr14	+	936	1	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	4	-25164	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGGCATGGGAAGGAAA	NA	False	NA	1	True	NA	NA	NA	118374573	118375509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_118374600_118375500
Isoform_19906_3	chr14	+	1157	1	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGATCTAGCTTGTCC	5344	False	NA	NA	False	AATAAA	-8	NA	118943302	118944459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_118943300_118944500
Isoform_19907_5	chr14	+	703	1	Genic_Genomic	ENSMUSG00000022136.9	novel	NA	NA	NA	NA	-43	-43062	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2286	False	NA	NA	False	NA	NA	NA	119175344	119176047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_+_119175300_119176000
Isoform_19909_5	chr14	+	330	1	FSM	ENSMUSG00000115684.2	ENSMUST00000227446.2	663	1	-120	453	-120	-453	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTGGAATCACGT	2573	False	NA	NA	False	NA	NA	NA	119515715	119516045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_119515700_119516000
Isoform_19910_6	chr14	+	421	1	NIC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	0	-52279	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCG	6867	False	NA	NA	False	AAGAAA	-45	NA	120513118	120513539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_120513100_120513500
Isoform_19912_4	chr14	-	177	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	121054751	121054574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_121054600_121054800
Isoform_19914_25	chr14	-	1297	1	FSM	ENSMUSG00000063410.9	ENSMUST00000226158.2	2661	1	-62	1426	-62	-1426	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAACAAAAATC	7374	False	NA	NA	False	NA	NA	NA	121616675	121615378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_121615400_121616700
Isoform_19915_6	chr14	+	286	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	121740707	121740993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_121740700_121741000
Isoform_19916_4	chr14	-	185	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121839212	121839027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_121839000_121839200
Isoform_19917_13	chr14	+	182	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTACCTAGT	NA	False	NA	NA	False	NA	NA	NA	122497602	122497784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_122497600_122497800
Isoform_19919_3	chr14	+	2510	1	Antisense	novelGene_ENSMUSG00000041703.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	122702352	122704862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_122702400_122704900
Isoform_19920_5	chr14	-	1717	1	FSM	ENSMUSG00000097577.3	ENSMUST00000224976.2	1019	1	8	-706	-8	706	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAACAAACAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	20753088	20751371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_20751400_20753100
Isoform_19921_3	chr14	-	183	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4286212	4286029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_4286000_4286200
Isoform_19922_3	chr14	-	177	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGGAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	21394495	21394318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_21394300_21394500
Isoform_19923_3	chr2	+	181	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	166840382	166840563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_166840400_166840600
Isoform_19925_3	chr14	+	2064	1	NIC	ENSMUSG00000021767.20	novel	606	2	NA	NA	0	-33614	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAAAAGAATGTTAC	NA	False	NA	NA	False	NA	NA	NA	21531501	21533565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_21531500_21533600
Isoform_19926_16	chr10	-	177	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121351332	121351155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_121351200_121351300
Isoform_19927_4	chr14	+	216	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24390104	24390320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_24390100_24390300
Isoform_19928_4	chr14	+	173	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAACGGGGCTT	29	False	NA	NA	False	NA	NA	NA	25529845	25530018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_25529800_25530000
Isoform_19929_50	chr1	+	167	1	ISM	ENSMUSG00000026496.12	ENSMUST00000192411.2	553	2	1878	9	1878	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	1235	False	NA	NA	False	NA	NA	NA	180420725	180420892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_180420700_180420900
Isoform_19930_7	chr14	+	511	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACAAAACAAACAT	3212	False	NA	NA	False	NA	NA	NA	25591724	25592235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_25591700_25592200
Isoform_19932_4	chr14	-	2910	2	Genic_Genomic	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	-72163	multi-exon	TRUE	non_canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	26256052	26253117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_26254406_26254430
Isoform_19933_3	chr14	+	199	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCAATTTCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	26323844	26324043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_26323800_26324000
Isoform_19934_7	chr14	-	178	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2991	False	NA	NA	False	NA	NA	NA	26439884	26439706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_26439700_26439900
Isoform_19935_4	chr10	-	292	2	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATTTAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	41588639	41290822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_41290947_41588471
Isoform_19936_7	chr14	+	175	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATATT	2880	False	NA	NA	False	NA	NA	NA	30719760	30719935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_30719800_30719900
Isoform_19938_8	chr14	-	595	1	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	9	-1775	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30740992	30740397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_30740400_30741000
Isoform_1994_38	chr10	-	2389	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
Isoform_19940_7	chr14	-	1115	1	Genic_Genomic	ENSMUSG00000115760.2	novel	NA	NA	NA	NA	708	499	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	31877320	31876205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_31876200_31877300
Isoform_19945_15	chr14	+	332	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	185	-49	185	49	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2459	False	NA	NA	False	AATATA	-17	NA	33892796	33893128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_33892800_33893100
Isoform_19946_3	chr15	-	241	1	FSM	ENSMUSG00000085442.2	ENSMUST00000148102.2	466	1	276	-51	276	51	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	33	False	NA	NA	False	AATATA	-17	NA	37943760	37943519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_37943500_37943800
Isoform_19950_3	chr14	+	691	1	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCACTGCTCACTGAC	967	False	NA	NA	False	NA	NA	NA	34086984	34087675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_34087000_34087700
Isoform_19951_6	chr2	-	176	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	164708286	164708110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_164708100_164708300
Isoform_19952_5	chr14	-	191	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCTGGTAAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	8470498	8470307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_8470300_8470500
Isoform_19953_3	chr14	+	199	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	34420699	34420898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_34420700_34420900
Isoform_19954_7	chr14	+	540	1	ISM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	73510	6	10167	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACACGTTGTCTTTAA	NA	False	NA	8	True	AATAAA	-13	NA	34469394	34469934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_+_34469400_34469900
Isoform_19959_3	chr14	+	2037	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAGAATACATGA	NA	False	NA	NA	False	NA	NA	NA	43129177	43131214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_43129200_43131200
Isoform_19960_5	chr14	-	963	1	FSM	ENSMUSG00000033111.17	ENSMUST00000223697.2	915	1	-47	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	10185509	10184546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_10184500_10185500
Isoform_19961_3	chr14	+	258	1	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACAAAACTTTCAA	NA	False	NA	NA	False	NA	NA	NA	41761479	41761737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_41761500_41761700
Isoform_19962_5	chr14	+	182	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	45454679	45454861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_45454700_45454900
Isoform_19964_4	chr14	+	728	1	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	10	-14696	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCCACAAAAAACGAT	NA	False	NA	NA	False	NA	NA	NA	45588643	45589371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_45588600_45589400
Isoform_19965_3	chr14	+	511	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	-100	274	0	-274	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGTCAACCCTGCACC	NA	False	NA	NA	False	NA	NA	NA	46321484	46321995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_46321500_46322000
Isoform_19966_5	chr14	+	395	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	442	-152	442	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	46322026	46322421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_46322000_46322400
Isoform_19974_3	chr14	-	176	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCG	NA	False	NA	NA	False	NA	NA	NA	47821144	47820968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_47821000_47821100
Isoform_19975_222	chr14	-	673	1	FSM	ENSMUSG00000062081.7	ENSMUST00000180532.2	378	1	-57	-238	-57	238	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	48317266	48316593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_48316600_48317300
Isoform_19976_3	chr14	-	320	1	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48956064	48955744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_48955700_48956100
Isoform_19977_24	chr14	+	178	1	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAGAG	NA	False	NA	NA	False	NA	NA	NA	49226725	49226903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49226700_49226900
Isoform_19978_11	chr14	+	2485	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	49839685	49842170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49839700_49842200
Isoform_1998_10	chr10	-	2260	12	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	195.151138715993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417401	116321072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116384937_116385081_116417357
Isoform_19980_32	chr14	+	2432	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	49839738	49842170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49839700_49842200
Isoform_19981_369	chr14	+	2355	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	49839815	49842170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49839800_49842200
Isoform_19988_3	chr14	+	1675	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49844909	49846584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49844900_49846600
Isoform_19989_4	chr14	+	1173	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAAATTGCCTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	49845408	49846581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49845400_49846600
Isoform_1999_4	chr10	-	2814	11	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	24	6	combination_of_known_junctions	TRUE	canonical	3	51	junction_10	85.4016978753936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGGTTATTTTCTGTTC	NA	False	NA	1	True	ATTAAA	-22	NA	116786312	116741682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
Isoform_19991_6	chr14	+	979	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGCCTTAGCTCCGTT	NA	False	NA	NA	False	NA	NA	NA	49845606	49846585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49845600_49846600
Isoform_19992_7	chr14	+	872	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49845712	49846584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_49845700_49846600
Isoform_19995_5	chr14	-	304	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	-35	-13638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATCGAGATCCTTTTGG	5444	False	NA	NA	False	NA	NA	NA	51045224	51044899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr14_-_51045000_51045020
Isoform_19996_14	chr14	-	174	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTAATTAATTA	4429	False	NA	NA	False	NA	NA	NA	51142355	51142181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_51142200_51142400
Isoform_19997_6	chr14	+	2179	1	Genic_Genomic	ENSMUSG00000035960.15	novel	NA	NA	NA	NA	-10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTGGCTTTCTTTGTC	169	False	NA	11	True	AATAAA	-12	NA	51162414	51164593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_+_51162400_51164600
Isoform_2000_20	chr10	-	1821	11	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	20	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	85.4016978753936	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	-5	True	AATAAA	-12	NA	116786316	116742679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
Isoform_20002_7	chr14	+	194	1	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTGAGTACACTGTA	NA	False	NA	13	True	NA	NA	NA	52350429	52350623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_52350400_52350600
Isoform_20003_3	chr14	+	2192	1	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-4310	2651	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	52378510	52380702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_52378500_52380700
Isoform_20005_12	chr14	-	2211	1	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	256	-33231	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	52434617	52432406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52432400_52434600
Isoform_20006_10	chr14	-	2293	1	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	174	-33231	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	52434699	52432406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_52432400_52434700
Isoform_20007_3	chr14	-	353	1	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	39068	1	4092	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTCTTCCTATGTTCT	NA	False	NA	-10	True	AATAAA	-16	NA	52435961	52435608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr14_-_52435600_52436000
Isoform_20008_3	chr14	+	193	1	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAATCCAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	52507323	52507516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_52507300_52507500
Isoform_20009_3	chr14	-	1379	1	FSM	ENSMUSG00000022160.19	ENSMUST00000197394.2	1504	1	108	17	-29	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAACAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	52542473	52541094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_52541100_52542500
Isoform_20010_18	chr14	-	1753	1	FSM	ENSMUSG00000115785.2	ENSMUST00000228343.2	1768	1	0	15	0	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACAAAAAAAAATAATAGTC	NA	False	NA	NA	False	AATAAA	-19	NA	53100209	53098456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_53098500_53100200
Isoform_20013_6	chr14	+	1064	1	FSM	ENSMUSG00000000959.8	ENSMUST00000228567.2	1059	1	-4	-1	-4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	54598286	54599350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_54598300_54599400
Isoform_20017_365	chr14	+	1208	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-179	-693	-179	693	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATTTT	NA	False	NA	NA	False	AATAAA	-33	NA	13669258	13670466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_13669300_13670500
Isoform_2002_9	chr10	-	1870	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	-27	1	-5	-1	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCGTGTGTCTTTCTT	NA	False	NA	-8	True	AATAAA	-9	NA	116786363	116742682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_2003_28	chr10	-	2823	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	18	-997	18	4	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGGTTATTTTCTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	116786318	116741684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_20033_9	chr14	-	282	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGGGGCAGGTGTTGA	9243	False	NA	NA	False	AATAAA	-25	NA	55083148	55082866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_55082900_55083100
Isoform_20035_8	chr14	+	777	1	Genic_Genomic	ENSMUSG00000022194.16	novel	NA	NA	NA	NA	3310	750	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGGCCCTTTGGATG	NA	False	NA	14	True	AATAAA	-13	NA	55135599	55136376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_+_55135600_55136400
Isoform_20037_4	chr19	-	178	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46989269	46989091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_46989100_46989300
Isoform_2004_182	chr10	-	1842	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	4	-2	4	2	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	-5	True	AATAAA	-12	NA	116786332	116742679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
Isoform_20044_7	chr14	-	2534	1	NIC	ENSMUSG00000002320.16	novel	2517	6	NA	NA	5	-372	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	5197	False	NA	NA	False	NA	NA	NA	55880806	55878272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_55878300_55880800
Isoform_20048_3	chr14	+	3857	1	NIC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	1	-7604	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAAAAGAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56122431	56126288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_56122400_56126300
Isoform_20049_4	chr14	+	245	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	56201346	56201591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_56201300_56201600
Isoform_20050_4	chr14	+	585	1	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-27	-38659	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATAAAAAAGG	NA	False	NA	NA	False	AGTAAA	-21	NA	56640126	56640711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_56640100_56640700
Isoform_20052_4	chr14	-	185	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56827208	56827023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_56827000_56827200
Isoform_20053_12	chr14	+	2364	1	FSM	ENSMUSG00000021748.10	ENSMUST00000225735.2	2377	1	6	7	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	14296816	14299180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_14296800_14299200
Isoform_20054_18	chr2	-	201	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTAGAGTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	173191082	173190881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_173190900_173191100
Isoform_20055_4	chr14	-	1085	1	Genic_Genomic	ENSMUSG00000021938.13	novel	NA	NA	NA	NA	-13	-28387	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAATCCAATTAG	NA	False	NA	NA	False	ATTAAA	-32	NA	57015786	57014701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_57014700_57015800
Isoform_20056_7	chr14	+	1260	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCTGGTCTGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	57015091	57016351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr14_+_57015100_57016400
Isoform_20057_14	chr14	-	232	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCCTAGGTG	NA	False	NA	NA	False	ATTAAA	-8	NA	57077974	57077742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_57077700_57078000
Isoform_20058_3	chr14	+	202	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTACTTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57714395	57714597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_57714400_57714600
Isoform_2006_3	chr10	-	1732	10	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	122.93368683166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786325	116742681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775382_116786164
Isoform_20060_41	chr14	-	185	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGGTCCAACTTCCAA	NA	False	NA	NA	False	NA	NA	NA	58014813	58014628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_58014600_58014800
Isoform_20061_5	chr14	-	1017	1	NIC	ENSMUSG00000021965.4	novel	1242	7	NA	NA	-11	-3022	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58063631	58062614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_-_58062600_58063600
Isoform_20062_34	chr14	+	699	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-179	-1	17	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTCTCATACGGAAT	NA	False	NA	26	True	ATTAAA	-18	NA	58063707	58064406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_58063700_58064400
Isoform_20063_13	chr14	-	1300	1	Genic_Genomic	ENSMUSG00000021969.9	novel	NA	NA	NA	NA	-31	-25433	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCGGGCT	NA	False	NA	NA	False	AATACA	-8	NA	58127764	58126464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr14_-_58126500_58127800
Isoform_20064_5	chr9	+	177	1	Intergenic	novelGene_2043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59118368	59118545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_59118400_59118500
Isoform_20065_7	chr14	+	243	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAGTAAAAAGAAATCAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	58157629	58157872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_58157600_58157900
Isoform_20066_5	chr14	-	179	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGTAGAA	NA	False	NA	NA	False	NA	NA	NA	58158120	58157941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_58157900_58158100
Isoform_20068_9	chr14	+	1382	1	NIC	ENSMUSG00000035469.18	novel	765	6	NA	NA	2	-7354	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAATAAATATAAAG	NA	False	NA	NA	False	AAGAAA	-9	NA	59438684	59440066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59438700_59440100
Isoform_20069_3	chr14	-	3257	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59608004	59604747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_59604700_59608000
Isoform_2007_3	chr10	-	2769	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-76	-3	-3	3	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTGGGTTATTTTCTG	NA	False	NA	-2	True	ATTAAA	-19	NA	116786361	116741685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
Isoform_20070_7	chr14	+	830	1	NIC	ENSMUSG00000021981.11	novel	372	4	NA	NA	5	-19858	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	TATAAA	-22	NA	59678434	59679264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_59678400_59679300
Isoform_20072_14	chr14	+	178	1	NIC	ENSMUSG00000098088.2	novel	352	2	NA	NA	753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6005	False	NA	NA	False	NA	NA	NA	61867685	61867863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr14_+_61867700_61867900
Isoform_20073_3	chr14	-	229	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTTTATAAAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	62078293	62078064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_62078100_62078300
Isoform_20074_65	chr14	+	1270	1	FSM	ENSMUSG00000021939.9	ENSMUST00000225639.2	1269	1	2	-3	2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCATGC	NA	False	NA	NA	False	NA	NA	NA	63359964	63361234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_63360000_63361200
Isoform_20083_4	chr15	-	1458	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	83	24	83	-24	multi-exon	FALSE	canonical	3	8	junction_6	2.40947204913349	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAATTTTGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	4008972	3994950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
Isoform_20084_7	chr15	-	5071	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	0	5	0	-5	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTTGTTTCTTACTTT	2180	False	NA	-15	True	AATAAA	-15	NA	4025226	4011521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
Isoform_2009_9	chr10	-	1733	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-37	994	14	-1	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCGTGTGTCTTTCTT	NA	False	NA	-8	True	AATAAA	-9	NA	116786322	116742682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
Isoform_20090_127	chr15	-	2123	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	4	-1	4	1	multi-exon	TRUE	canonical	3	158	junction_1	88.3053055575902	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTTTGTCCTTTCTG	NA	False	NA	-5	True	AATAAA	-15	NA	8128671	7902541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
Isoform_20094_41	chr15	-	1698	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	0	-568	0	568	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTTGGCTATGTTGTC	NA	False	NA	-1	True	NA	NA	NA	8128693	8121142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
Isoform_20095_58	chr15	-	1099	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	21	10	3	-10	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTAAAATGGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	8128672	8121720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
Isoform_20098_4	chr15	-	2434	10	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-189	60863	-189	-60863	5prime_fragment	FALSE	canonical	2	7	junction_6	4.39134952119322	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCGAAATGAAACAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	8474136	8380963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
Isoform_20104_30	chr15	-	3869	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	293	1	10	-1	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTGTATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	8739955	8663608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
Isoform_20108_127	chr15	-	3104	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	13	1	0	-1	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGAGCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	9140439	9112073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
Isoform_20111_6	chr15	-	3231	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-114	1	-40	-1	multi-exon	FALSE	canonical	3	163	junction_7	20.0690167197789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGAGCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	9140566	9112073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
Isoform_20112_8	chr15	-	1372	3	FSM	ENSMUSG00000054115.13	ENSMUST00000191316.2	1391	3	-2	21	-2	-21	multi-exon	FALSE	canonical	3	181	junction_1	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9140441	9127155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_9128085_9139518_9139791_9140270
Isoform_20113_19	chr15	-	2041	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	12	7	12	2	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	-23	True	NA	-22	True	ATTAAA	-16	NA	10470590	10446848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
Isoform_20119_55	chr15	-	2595	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	734.144427207617	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCTTTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	10485987	10474862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_10475136_10475160_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_20120_689	chr15	-	1224	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	38	1402	0	-1402	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10485995	10476266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_20121_16	chr15	-	2627	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	13	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	734.144427207617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCTTTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	10486020	10474862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_10475140_10475165_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_20122_184	chr15	-	1252	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	13	1399	13	-1399	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTATTCTTTTCAGA	NA	False	NA	-8	True	AATAAA	-17	NA	10486020	10476263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
Isoform_20127_14	chr15	-	4773	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-23	9	-23	-9	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	8874	False	NA	-12	True	AATAAA	-17	NA	10714676	10569063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_20128_9	chr15	-	4972	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-222	9	-165	-9	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	8675	False	NA	-12	True	AATAAA	-17	NA	10714875	10569063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_20130_6	chr15	-	4866	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-144	-7	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTATGGATTTGTGGTG	8696	False	NA	-10	True	AATAAA	-19	NA	10714854	10569061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
Isoform_20139_1743	chr15	-	2600	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	40	1365	-24	339	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATCAAGACCTCTGTC	NA	False	NA	-11	True	AATAAA	-12	NA	11399711	11383751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
Isoform_20140_80	chr15	-	2663	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	-23	1365	-23	339	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATCAAGACCTCTGTC	NA	False	NA	-11	True	AATAAA	-12	NA	11399774	11383751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
Isoform_20149_8	chr15	-	2456	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	-16	-3	-16	3	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGTGTGTGACAAATC	1429	False	NA	NA	False	ATTAAA	-25	NA	11905776	11844465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
Isoform_20150_6	chr15	-	2447	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	-41	4486	-6	1	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGAGGTGTGTGACAAA	1439	False	NA	NA	False	ATTAAA	-23	NA	11905766	11844467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
Isoform_20152_41	chr15	-	3307	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	53	12	7	-12	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGAAACACACCCTT	862	False	NA	NA	False	AATGAA	-39	NA	11996091	11981436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
Isoform_20154_1540	chr15	-	682	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	53	2637	7	65	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTACCCTTTTTTGA	862	False	NA	78	True	AATAAA	-21	NA	11996091	11984061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
Isoform_20158_28	chr15	-	3701	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	31	234	-7	-234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824704	12808496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_20159_6	chr15	-	3408	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	-30	588	-30	7	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAAAAGATTTGTGTTC	NA	False	NA	-5	True	AATAAA	-26	NA	12824765	12808850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_20160_28	chr15	-	3732	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	0	234	0	-234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824735	12808496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_20165_9	chr15	-	3578	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	-11	-361	0	-234	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824727	12808496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
Isoform_20166_3	chr15	-	3635	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-8	-234	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	109.959547292704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824705	12808496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
Isoform_20167_5	chr15	-	3516	7	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	0	232	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	140.23512002665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	NA	False	NA	-8	True	AATAAA	-15	NA	12824735	12808499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
Isoform_20168_12	chr15	-	850	3	FSM	ENSMUSG00000022195.8	ENSMUST00000228888.2	1971	3	0	1121	0	-1121	multi-exon	FALSE	canonical	3	264	junction_2	25	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	12824727	12821110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_12821640_12823646_12823793_12824552
Isoform_20169_3	chr15	-	691	2	ISM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	0	12255	0	-1123	5prime_fragment	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAGAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12824716	12821112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_12821640_12824552
Isoform_20170_6	chr15	-	1063	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	-7	799	-7	781	multi-exon	FALSE	canonical	3	95	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25413857	25364161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_25365005_25413637
Isoform_20171_116	chr15	-	1496	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	3	-8	-3	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTAGTTTTGTATTTG	NA	False	NA	-8	True	AATGAA	-37	NA	27630787	27606007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
Isoform_20173_8	chr15	-	2111	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	174	5181	-9	5	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGATTCTCCCCTTGCC	63	False	NA	NA	False	AATAAA	-29	NA	31367698	31296804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
Isoform_20174_4	chr15	-	2966	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	21	3273	21	-3273	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTGCCTTTTCGTGTC	NA	False	NA	-3	True	AATAAA	-25	NA	31531178	31459309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
Isoform_20193_769	chr15	-	1779	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	60	14	-4	-14	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTCCACTTATTCAGA	NA	False	NA	-17	True	AATAAA	-16	NA	31601890	31590959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_20194_1027	chr15	-	1772	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-3	84	-3	-84	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601953	31591029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_20195_264	chr15	-	1842	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-3	14	-3	-14	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTCCACTTATTCAGA	NA	False	NA	-17	True	AATAAA	-16	NA	31601953	31590959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_20196_3141	chr15	-	1703	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	67	83	3	-83	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	3141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601883	31591028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
Isoform_202_3	SIRV12001	+	863	1	FSM	SIRV12001A	SIRV12001	12029	1	11164	2	11164	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	11164	12027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12001_+_11200_12000
Isoform_20209_209	chr15	-	539	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	32	-1	-30	1	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	393	False	NA	-24	True	AATAAA	-23	NA	34443336	34440654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
Isoform_2021_143	chr10	-	2050	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	19	3	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTACTGATCTGTATA	NA	False	NA	-8	True	AATAAA	-22	NA	116899261	116886902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
Isoform_20212_397	chr15	-	500	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	381	5	0	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	324	False	NA	-25	True	AATAAA	-22	NA	34443405	34440655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
Isoform_20213_66	chr15	-	782	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	100	4	100	1	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	43	False	NA	-24	True	AATAAA	-23	NA	34443686	34440654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
Isoform_20216_98	chr15	-	450	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	393	False	NA	-24	True	AATAAA	-23	NA	34443336	34440654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
Isoform_20219_48	chr15	-	994	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	9	1	9	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	-11	True	AATAAA	-20	NA	34495392	34484167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
Isoform_2022_1899	chr10	-	1925	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	37	-3	-14	3	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTACTGATCTGTATA	NA	False	NA	-8	True	AATAAA	-22	NA	116899682	116886902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
Isoform_20222_17	chr15	-	2696	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	28	190	28	-13	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATTAAAGT	NA	False	NA	NA	False	ACTAAA	-20	NA	35155924	34875831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
Isoform_20223_80	chr15	-	2794	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	117	3	-20	-3	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCGTTGTTGTTAT	NA	False	NA	-1	True	AATAAA	-18	NA	35155835	34875644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
Isoform_20224_17	chr15	-	2877	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	34	3	-22	-3	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCGTTGTTGTTAT	NA	False	NA	-1	True	AATAAA	-18	NA	35155918	34875644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
Isoform_2023_40	chr10	-	1990	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	-38	7	-38	-2	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCCTTAATGTCTTACT	NA	False	NA	-18	True	AATAAA	-12	NA	116899757	116886912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
Isoform_20232_25	chr15	-	1223	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	-485	0	77	0	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938276	35932125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_35932244_35935430_35935560_35937300
Isoform_20234_1618	chr15	-	415	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	84	4	45	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938308	35932125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
Isoform_20235_418	chr15	-	448	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	51	4	12	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938341	35932125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
Isoform_20238_62	chr15	-	4284	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-9	2	-9	-2	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTGTGTGCCCAGGA	NA	False	NA	-1	True	AATAAA	-15	NA	36283302	36240080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
Isoform_20244_372	chr15	-	2466	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	43	0	12	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496923	36477813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
Isoform_20270_259	chr15	-	2817	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	1	-1	1	1	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	378	False	NA	-6	True	AATAAA	-17	NA	36609216	36595903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
Isoform_20307_83	chr15	-	3328	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	235	-1441	-83	507	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGGCTTCACGTCTGT	675	False	NA	-2	True	AATAAA	-33	NA	36793846	36770506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_20308_875	chr15	-	2831	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	225	-934	-93	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	665	False	NA	-39	True	NA	NA	NA	36793856	36771013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_20311_24	chr15	-	2901	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	155	-934	155	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	595	False	NA	-39	True	NA	NA	NA	36793926	36771013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_20312_28	chr15	-	1939	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	193	-10	-125	10	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTCTACAGCTTTTC	633	False	NA	-2	True	NA	NA	NA	36793888	36771937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
Isoform_20323_24	chr15	-	3014	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	0	267	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	13	True	NA	-39	True	NA	NA	NA	36794508	36771013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
Isoform_20325_24	chr15	-	2080	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	934	267	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	13	True	NA	-12	True	NA	NA	NA	36794508	36771947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
Isoform_2033_66	chr10	-	1313	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	19	-5	2	4	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTTGTGACTTC	3390	False	NA	-9	True	AATAAA	-19	NA	117060393	117051121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
Isoform_20336_4281	chr15	-	2351	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	84	1982	84	1619	multi-exon	TRUE	canonical	3	6501	junction_2	212.49836600679	4281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAAACTAGTCTAATTT	239	False	NA	-14	True	ATTAAA	-11	NA	37007562	36999252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
Isoform_20337_77	chr15	-	2505	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	-70	1982	-70	1619	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAAACTAGTCTAATTT	85	False	NA	-14	True	ATTAAA	-11	NA	37007716	36999252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
Isoform_2036_63	chr10	-	1380	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	28	-81	11	80	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3399	False	NA	-1	True	AATAAA	-22	NA	117060384	117051045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
Isoform_20363_6	chr15	-	3183	20	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	81818	-429	3520	-5	3prime_fragment	FALSE	canonical	3	678	junction_11	97.9459402028286	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	7841	False	NA	-10	True	AATAAA	-26	NA	37996851	37968107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798
Isoform_20364_5	chr15	-	3291	20	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	81707	-426	3409	-8	3prime_fragment	FALSE	canonical	3	678	junction_11	97.9459402028286	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	7730	False	NA	-13	True	AATAAA	-23	NA	37996962	37968110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798
Isoform_20365_3	chr15	-	5129	31	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	73767	-427	-3363	-7	3prime_fragment	FALSE	canonical	0	0	junction_21	190.662342608311	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGCTTTTTTATGGT	4770	False	NA	-12	True	AATAAA	-24	NA	38004902	37968109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785
Isoform_20370_2914	chr15	-	3044	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300950	38294656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
Isoform_20373_79	chr15	-	3073	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-29	0	-29	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300979	38294656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
Isoform_20379_6	chr15	-	4046	12	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTCATGCTTTACTTT	NA	False	NA	-16	True	GATAAA	-8	NA	38519507	38488489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_2038_4	chr10	-	2002	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-41	266	0	66	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTAGCTCTACTTTTAT	4474	False	NA	-14	True	AATAAA	-21	NA	117212875	117185212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20381_8	chr15	-	4272	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-52	0	52	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGTATATTGCCC	NA	False	NA	-4	True	AATAGA	-18	NA	38519510	38488429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
Isoform_20382_17	chr15	-	4115	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	756	0	55	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_20383_34	chr15	-	2501	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	2370	0	-1556	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTTTTTCAGGCTAA	NA	False	NA	-9	True	AATAAA	-15	NA	38519510	38490040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_20385_25	chr15	-	4055	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	3	813	0	1	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	-10	True	GATAAA	-14	NA	38519507	38488483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
Isoform_20388_4	chr15	-	2269	7	FSM	ENSMUSG00000022299.10	ENSMUST00000227323.2	979	7	-8	-1282	-8	181	multi-exon	FALSE	canonical	2	3	junction_3	37.5307281511504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTGTTTGCTATAA	NA	False	NA	NA	False	AATAAA	-26	NA	38976076	38958181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38959504_38960914_38961061_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_20389_31	chr15	-	2309	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	41	3555	-2	182	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTGTTTGCTATAAT	NA	False	NA	NA	False	AATAAA	-27	NA	38976070	38958180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_2039_5	chr10	-	2227	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	7	-7	6	4	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTGTTCACGTTATT	4522	False	NA	-5	True	AATAAA	-20	NA	117212827	117184939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20390_14	chr15	-	2381	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-31	3555	-31	182	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTGTTTGCTATAAT	NA	False	NA	NA	False	AATAAA	-27	NA	38976142	38958180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_20392_4	chr15	-	2826	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	35	3044	-8	693	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTCTATCTGCCTC	NA	False	NA	0	True	ATTAAA	-21	NA	38976076	38957669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
Isoform_20393_32	chr15	-	707	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72606	2	8387	-2	3prime_fragment	FALSE	canonical	3	216	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTGTCTGAGTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	39648260	39646094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_39646506_39647964
Isoform_20394_13	chr15	-	2089	10	FSM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_5	67.0043300609265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39720845	39646092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_39646506_39647964_39648111_39656622_39656831_39687561_39687705_39690259_39690402_39691370_39691528_39705318_39705509_39707253_39707434_39710004_39710164_39720494
Isoform_20395_5	chr15	-	4084	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	12	13	12	1	multi-exon	FALSE	canonical	3	34	junction_6	6.95221787153807	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTTTTTAAATCAAAGT	NA	False	NA	-15	True	ATTAAA	-23	NA	39807172	39733997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
Isoform_204_16	SIRV12002	+	3268	1	FSM	SIRV12002A	SIRV12002	11999	1	0	8731	0	-8731	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGGAAGTAGGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	0	3268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12002_+_0_3300
Isoform_2040_4	chr10	-	3089	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-33	-829	8	826	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACCTGGCTAGCATGT	4482	False	NA	NA	False	AATAAA	-12	NA	117212867	117184117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20402_63	chr15	-	1557	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	-46	-5	-46	5	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2617	False	NA	-17	True	AATAAA	-21	NA	43146161	43113448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
Isoform_20403_487	chr15	-	1511	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	0	-5	0	5	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2663	False	NA	-17	True	AATAAA	-21	NA	43146115	43113448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
Isoform_20411_91	chr15	-	3019	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	422	-841	3	841	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTAGTGATGTTTGT	NA	False	NA	-8	True	AATAAA	-17	NA	44291281	44238625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_20417_39	chr15	-	2994	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	19	2064	0	844	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	44291250	44238622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_20419_5	chr15	-	2188	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-20	2909	-5	-1	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCATTGTTTAGATTGG	NA	False	NA	70	True	AATAAA	-18	NA	44291289	44239467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
Isoform_2042_37	chr10	-	2167	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	4359	0	7	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCACGTTATTTGA	4474	False	NA	-2	True	AATAAA	-23	NA	117212875	117184936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20423_4	chr15	-	4785	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-359	5433	-9	249	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAGAAAAAAAAATGGC	9959	False	NA	NA	False	CATAAA	-39	NA	50753446	50523580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_20424_7	chr15	-	4517	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-368	5710	-18	-11	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAGATAATTAAAAAAAAA	9950	False	NA	NA	False	AATGAA	-30	NA	50753455	50523857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_20425_3	chr15	-	4824	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-438	5473	-88	209	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAGCCAAATGAGAA	9880	False	NA	NA	False	NA	NA	NA	50753525	50523620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
Isoform_2043_33	chr10	-	2986	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	3540	0	826	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACCTGGCTAGCATGT	4474	False	NA	NA	False	AATAAA	-12	NA	117212875	117184117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20431_1254	chr15	-	1253	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	40	2	-29	-2	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	-14	True	AATAAA	-22	NA	51728879	51649955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
Isoform_20432_213	chr15	-	1272	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	18	5	18	-5	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTGTGTGTATTTA	NA	False	NA	-17	True	AATAAA	-19	NA	51728901	51649958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
Isoform_2044_22	chr10	-	3902	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	10	2614	10	1752	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCAGTGTCTCCTACC	4484	False	NA	-1	True	AATAAA	-19	NA	117212865	117183191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20442_4	chr15	-	3705	14	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-39	-365	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	201.697735067504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51854945	51826000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854630
Isoform_20443_78	chr15	-	3590	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	2	364	2	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855141	51825999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_20444_164	chr15	-	3541	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	51	364	51	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855092	51825999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_20445_8	chr15	-	3679	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	-87	364	-87	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855230	51825999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
Isoform_2045_3	chr10	-	3973	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	2553	0	1813	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTTGTCAAAG	4474	False	NA	60	True	AGTAAA	-14	NA	117212875	117183130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20452_17	chr15	-	1506	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	0	-7	0	4	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTGACTTCTTTAAGA	NA	False	NA	-1	True	AATAAA	-21	NA	54953876	54939490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
Isoform_20454_3	chr15	-	2480	11	NNC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	-1745	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	110.745654542289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTTTTATCCC	NA	False	NA	-15	True	AATAAA	-7	NA	54955632	54939504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621_54954754_54955521
Isoform_20455_197	chr15	-	1319	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	11	-6	0	6	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGACTTCTTTAAGAAT	NA	False	NA	1	True	AATAAA	-23	NA	54953876	54939488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
Isoform_20456_7	chr15	-	1292	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	81	-49	70	49	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTAATGATGTGTGTG	NA	False	NA	44	True	ATTAAA	-20	NA	54953806	54939445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
Isoform_20457_7	chr15	-	2353	10	NNC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	-1800	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	82.6013780412953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54955687	54939497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621_54954754_54955521
Isoform_20459_407	chr15	-	782	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	440	1	-25	-1	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGTCTCTTACTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	55420704	55397490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
Isoform_20460_6	chr15	-	1026	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	197	0	197	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420947	55397489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
Isoform_20461_46	chr15	-	689	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	41	0	-25	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420704	55397489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
Isoform_20464_29	chr15	-	2936	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-30	269	-30	-269	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755874	57733166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
Isoform_20465_268	chr15	-	2912	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-7	270	-7	-270	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTCTGTGTTAAGTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	57755851	57733167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
Isoform_20467_29	chr15	-	2189	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-50	1036	-50	-1036	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCTTTATATAGTTA	NA	False	NA	-20	True	AATAAA	-14	NA	57755894	57733933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
Isoform_20481_521	chr15	-	1325	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	0	16	0	-5	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCTCCCAGGTAA	NA	False	NA	-25	True	AATAAA	-24	NA	57897711	57885670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
Isoform_20486_38	chr15	-	1411	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	316.693795329179	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAACTCTCTCCCAGGT	NA	False	NA	-27	True	AATAAA	-22	NA	57897711	57885672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
Isoform_20489_5	chr15	-	4741	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	24	-1	24	1	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAATGTGGTCTGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	57939841	57910699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
Isoform_20493_13	chr15	-	5670	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	13	1	13	-1	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998465	57957442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
Isoform_20497_4	chr15	-	1295	8	ISM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-17	26715	-17	-4613	5prime_fragment	FALSE	canonical	3	283	junction_5	25.2861178337451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTATTTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-1	NA	57998495	57984156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
Isoform_205_3	SIRV12002	+	3572	1	FSM	SIRV12002A	SIRV12002	11999	1	8427	0	8427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	8427	11999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12002_+_8400_12000
Isoform_2050_11	chr10	-	2980	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	9	826	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACCTGGCTAGCATGT	4483	False	NA	NA	False	AATAAA	-12	NA	117212866	117184117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20503_3	chr15	-	3695	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	51	1	51	-1	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGGCTTCTGTATCTGCC	NA	False	NA	86	True	AATAAA	-16	NA	58695328	58654118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
Isoform_20505_3	chr15	-	3836	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-88	-1	20	1	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTTCTGTATCTGCCCT	NA	False	NA	88	True	AATAAA	-18	NA	58695467	58654116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
Isoform_20507_4	chr15	-	1966	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	-7	-1044	-4	1	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAGTTATCCTTGAT	NA	False	NA	-2	True	AATAAA	-17	NA	58805583	58771778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
Isoform_20508_20	chr15	-	926	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	-11	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
Isoform_20509_10	chr15	-	862	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	26.3417918904542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
Isoform_2051_6	chr10	-	3905	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	10	1752	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCAGTGTCTCCTACC	4484	False	NA	-1	True	AATAAA	-19	NA	117212865	117183191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20511_82	chr15	-	2986	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-57	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACCTTGATCTTTTAAT	2672	False	NA	-3	True	ATTAAA	-19	NA	58953911	58815095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20512_10	chr15	-	4990	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-57	-9	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGAGTTCTCAGGTC	2672	False	NA	NA	False	AATAAA	-10	NA	58953911	58813091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20514_24	chr15	-	3035	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-104	-3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGATCTTTTAATTT	2625	False	NA	-1	True	ATTAAA	-21	NA	58953958	58815093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20515_8	chr15	-	2790	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-56	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACCTTGATCTTTTAAT	2673	False	NA	-3	True	ATTAAA	-19	NA	58953910	58815095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20516_3	chr15	-	2848	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-116	-7	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACCTTGATCTTTTA	2613	False	NA	-5	True	ATTAAA	-17	NA	58953970	58815097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20519_19	chr15	-	3035	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATCTTTTAATTTGT	2672	False	NA	1	True	ATTAAA	-23	NA	58953911	58815091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_2052_19	chr10	-	2173	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCACGTTATTTGA	4471	False	NA	-2	True	AATAAA	-23	NA	117212878	117184936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20521_10	chr15	-	3073	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-101	-7	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACCTTGATCTTTTA	2628	False	NA	-5	True	ATTAAA	-17	NA	58953955	58815097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
Isoform_20527_15	chr15	-	2991	3	FSM	ENSMUSG00000022353.11	ENSMUST00000228655.2	2956	3	-57	22	-57	1	multi-exon	FALSE	canonical	3	76	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTGTACTCT	2672	False	NA	NA	False	NA	NA	NA	58953911	58924618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_58926941_58930209_58930272_58953304
Isoform_20528_196	chr15	-	4032	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	0	1	0	-1	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246016	59203846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_20529_3	chr15	-	4821	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	0	-788	0	788	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAGAACATAAGA	NA	False	NA	NA	False	TATAAA	-14	NA	59246016	59203057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_20531_4	chr15	-	4167	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	0	-134	0	134	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTCTTCTAGCTGC	NA	False	NA	NA	False	AGTAAA	-14	NA	59246016	59203711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
Isoform_20532_12	chr15	-	5120	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	122	323	122	-323	multi-exon	FALSE	canonical	3	40	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTTCCTCTTTACTCT	NA	False	NA	-2	True	AATAAA	-20	NA	60696807	60691165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_60695841_60696362
Isoform_20533_3	chr15	-	5443	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	123	-1	123	1	multi-exon	FALSE	canonical	3	40	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTCCTTTTTTTTTCT	NA	False	NA	NA	False	AATACA	-15	NA	60696806	60690841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_60695841_60696362
Isoform_20537_33	chr15	-	1965	13	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	411.541310198624	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63869746
Isoform_20539_45	chr15	-	2155	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	NA	False	NA	-5	True	AATAAA	-21	NA	63932367	63802791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
Isoform_20543_282	chr15	-	1882	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-113	1	-113	-1	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
Isoform_20547_499	chr15	-	2073	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-180	3	-45	-3	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGGCTTGGTTTA	NA	False	NA	-9	True	AATAAA	-17	NA	63932372	63802795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
Isoform_2055_6	chr10	-	3648	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-5	1521	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACTGGAGATTTTGT	4510	False	NA	NA	False	AATACA	-10	NA	117212839	117183422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20557_36	chr15	-	1845	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-116	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8623	False	NA	-6	True	AATAAA	-20	NA	63869934	63802792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
Isoform_20558_28	chr15	-	2003	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGCTTGGTTTACT	NA	False	NA	-7	True	AATAAA	-19	NA	63932339	63802793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
Isoform_20559_13	chr15	-	2035	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-42	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	NA	False	NA	-5	True	AATAAA	-21	NA	63932369	63802791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
Isoform_2056_5	chr10	-	2767	10	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	0	709	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	184.803465843188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATGTAATT	4474	False	NA	NA	False	NA	NA	NA	117212875	117190721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20563_21	chr15	-	1799	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	398.425212555631	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8626	False	NA	-5	True	AATAAA	-21	NA	63869931	63802791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63869746
Isoform_20568_4	chr15	-	4480	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	1	1683	1	-1	multi-exon	TRUE	canonical	3	82	junction_19	14.5305128081956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTGTTTCTGGTCA	NA	False	NA	-2	True	ATTAAA	-21	NA	64184521	63960388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_20569_3	chr15	-	4432	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-24	7	10	-2	multi-exon	FALSE	canonical	3	46	junction_19	18.359240953674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAATGCTTGTTTCTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	64184512	63960391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_2057_7	chr10	-	2849	9	FSM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	-42	1012	0	709	multi-exon	FALSE	canonical	3	507	junction_4	46.3355627461241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATGTAATT	4474	False	NA	NA	False	NA	NA	NA	117212875	117190721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
Isoform_20571_13	chr15	-	991	8	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-64	71686	-30	-1283	5prime_fragment	FALSE	canonical	3	103	junction_3	7.73542078324622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCTACTTCTAGCA	NA	False	NA	NA	False	GATAAA	-43	NA	64184552	64032070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
Isoform_20574_167	chr15	-	2885	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	1	3	0	-3	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	-3	True	AATAAA	-15	NA	66841488	66801169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
Isoform_20576_9	chr15	-	2949	16	NIC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_15	12.2245654319489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGTCTTTTCCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	66841488	66801168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832465_66841352
Isoform_20577_3	chr15	-	2321	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	-4	3415	-4	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAACATTTCCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	67048683	66978138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
Isoform_20578_3	chr15	-	2389	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	-72	3415	-72	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAACATTTCCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	67048751	66978138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
Isoform_20579_9	chr15	-	4496	16	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-38	49	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	5.94194132137525	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGCCTGTTCCTTGTC	NA	False	NA	NA	False	AATAAA	-4	NA	68130743	67955563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
Isoform_2058_5	chr10	-	3108	12	FSM	ENSMUSG00000020184.16	ENSMUST00000105263.9	3145	12	18	19	18	1	multi-exon	TRUE	canonical	3	51	junction_9	142.979973168527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546645	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545558_117545690_117545850_117545934_117546456
Isoform_20581_3	chr15	-	4457	16	FSM	ENSMUSG00000022335.18	ENSMUST00000162054.9	4388	16	-37	-32	-37	32	multi-exon	FALSE	canonical	3	9	junction_13	6.94742158406028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGTGAAATAAAAGCATC	NA	False	NA	NA	False	AATAAA	-35	NA	68130742	67955580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084462_68084694_68096615_68096793_68130516
Isoform_20582_16	chr15	-	3934	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.4420075881827	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932912	72461468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
Isoform_20583_88	chr15	-	3889	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9692446667405	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932894	72461468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
Isoform_20587_21	chr15	-	3596	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-3	10207	-3	1282	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTGGTAGGTAGATG	4441	False	NA	-3	True	AATATA	-18	NA	73056787	72977899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_2059_22	chr10	-	3177	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	426	19	-40	1	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546237	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
Isoform_20591_4	chr15	-	3667	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-73	10206	-73	1283	multi-exon	TRUE	canonical	3	61	junction_13	10.6510302057803	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGGTAGGTAGATGC	4371	False	NA	-2	True	AATATA	-19	NA	73056857	72977898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
Isoform_20595_20	chr15	-	4184	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	3	230	3	-230	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1680	False	NA	-9	True	ATTAAA	-19	NA	73295037	73077180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
Isoform_20596_3	chr15	-	4065	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	22	-233	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1699	False	NA	-12	True	ATTAAA	-16	NA	73295018	73077183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
Isoform_20597_34	chr15	-	3052	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	2	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	19	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544417	74540931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74541843_74542028_74542166_74542413
Isoform_20598_11	chr15	-	3190	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	-136	0	-136	0	multi-exon	FALSE	canonical	3	15	junction_2	19	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544555	74540931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74541843_74542028_74542166_74542413
Isoform_2060_35	chr10	-	3112	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	491	19	25	1	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546172	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
Isoform_20600_86	chr15	-	3055	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	11.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544417	74540931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74541843_74542028_74542169_74542413
Isoform_20601_23	chr15	-	3172	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-119	2	-117	-2	multi-exon	FALSE	canonical	3	30	junction_2	11.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGTATGTGCCATTT	NA	False	NA	-2	True	AATAAA	-12	NA	74544536	74540933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74541843_74542028_74542169_74542413
Isoform_20602_49	chr15	-	3349	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	245	2259	245	-2259	multi-exon	FALSE	canonical	3	23	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTCATGATTCTTC	NA	False	NA	1	True	NA	NA	NA	74581139	74576408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74579714_74581095
Isoform_20603_3	chr15	-	4005	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	14	4	-8	-4	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTTTCTCTCAT	9954	False	NA	-8	True	AATAAA	-14	NA	74624881	74619704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
Isoform_20604_25	chr15	-	671	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	121	-1	121	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	897	False	NA	-1	True	ATTAAA	-19	NA	74671714	74668721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
Isoform_20605_4	chr15	-	774	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	18	-1	18	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	794	False	NA	-1	True	ATTAAA	-19	NA	74671817	74668721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
Isoform_20606_51	chr15	-	621	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	171	-1	171	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	947	False	NA	-1	True	ATTAAA	-19	NA	74671664	74668721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
Isoform_20607_3	chr15	-	872	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	13	-23	-8	1	multi-exon	FALSE	canonical	0	0	junction_3	38.2738669184195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTCTCCATTTTTCTT	9624	False	NA	-2	True	AATAAA	-17	NA	74869764	74866724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
Isoform_20608_35	chr15	-	861	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	95	-1	-8	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9603	False	NA	-3	True	AATAAA	-16	NA	74869785	74866725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
Isoform_20610_3	chr15	-	871	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187171.2	853	4	56	-74	-3	0	multi-exon	FALSE	canonical	2	2	junction_3	37.3452361977624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9608	False	NA	-3	True	AATAAA	-16	NA	74869780	74866725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_74867329_74868300_74868418_74869383_74869482_74869727
Isoform_20611_61	chr15	-	1894	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	10	-1	10	1	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTGTCACTGTGACC	NA	False	NA	-6	True	AATAAA	-12	NA	75550639	75528882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
Isoform_20612_7	chr15	-	1909	14	NNC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	-8	1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_10	24.9979880847244	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTGTCACTGTGACC	NA	False	NA	-6	True	AATAAA	-12	NA	75550657	75528882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541321_75541910_75542034_75546140_75546263_75547867_75547981_75550501
Isoform_20614_271	chr15	-	3354	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	7	1	7	-1	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTGTCTTGACTAC	NA	False	NA	-2	True	AATAAA	-18	NA	75713757	75626279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
Isoform_20615_18	chr15	-	3438	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-76	0	-76	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713840	75626278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
Isoform_20616_4	chr15	-	3408	12	NNC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	61.1939066809436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713708	75626282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713592
Isoform_20617_11	chr15	-	2053	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	63.9518568925094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75713698
Isoform_20618_16	chr15	-	1709	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	182	7	-9	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGCCATGTGTCGTT	NA	False	NA	NA	False	CATAAA	-23	NA	75766148	75762811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
Isoform_20621_17	chr15	-	1028	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781146	75767336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
Isoform_20622_73	chr15	-	973	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_7	1032.38266121806	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781151	75767336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
Isoform_20623_752	chr15	-	978	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	51	1283	2	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
Isoform_20626_12	chr15	-	903	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	-7	0	2	0	multi-exon	FALSE	canonical	3	250	junction_6	1385.14264207297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
Isoform_20627_103	chr15	-	906	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	30	688	2	0	multi-exon	FALSE	canonical	3	464	junction_5	1042.33482571048	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
Isoform_20628_168	chr15	-	1271	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	70	-2	70	2	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGACTTTAGTAGAGTT	NA	False	NA	-11	True	NA	NA	NA	75793339	75788323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_20629_10	chr15	-	1358	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	-17	-2	-17	2	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGACTTTAGTAGAGTT	NA	False	NA	-11	True	NA	NA	NA	75793426	75788323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_2063_219	chr10	-	3012	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	68	19	-5	1	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546595	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
Isoform_20630_4	chr15	-	2378	4	NIC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	40	0	intron_retention	FALSE	canonical	3	262	junction_2	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793369	75788325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75790314_75790521_75790702_75791077_75791143_75793224
Isoform_20631_12	chr15	-	1365	11	NIC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	180.942421781074	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8912	False	NA	-30	True	AATAAA	-14	NA	75801609	75796532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_20632_123	chr15	-	1342	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8912	False	NA	-29	True	AATAAA	-15	NA	75801609	75796531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
Isoform_20633_61	chr15	-	1303	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	45	7	0	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8885	False	NA	-29	True	AATAAA	-15	NA	75801636	75796531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_20634_402	chr15	-	1276	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	72	7	-7	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8912	False	NA	-29	True	AATAAA	-15	NA	75801609	75796531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
Isoform_20638_4	chr15	-	1968	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	487	3	487	-3	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCCGTTGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	75853804	75851723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75853537_75853649
Isoform_20639_3	chr15	-	4493	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	32	9	32	-9	multi-exon	FALSE	canonical	1	3	junction_2	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTGTGATCCCAAGCCT	7454	False	NA	NA	False	AATAAA	-15	NA	75881315	75872950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
Isoform_2064_66	chr10	-	3071	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	9	19	9	1	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546654	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
Isoform_20642_8	chr15	-	5423	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	12	5	12	-5	multi-exon	FALSE	canonical	3	271	junction_30	52.1302607094253	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941591	75919011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
Isoform_20643_200	chr15	-	1876	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	4	1	3	-1	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGTGTCTGAAATTG	NA	False	NA	-1	True	CATAAA	-24	NA	75952758	75942031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
Isoform_20647_858	chr15	-	1818	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	3	0	3	0	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952758	75942038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
Isoform_20652_4	chr15	-	2086	2	ISM	ENSMUSG00000118671.1	ENSMUST00000239552.1	12332	3	1039	21558	1039	-21558	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAACAAGAGATACTC	9821	False	NA	NA	False	NA	NA	NA	76003356	75994887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_75996926_76003308
Isoform_20655_5	chr15	-	2216	17	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	-44	17273	-44	215	5prime_fragment	FALSE	canonical	3	16	junction_16	10.1296285716703	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGGAGATCC	984	False	NA	NA	False	AATGAA	-4	NA	76079954	76072448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
Isoform_20656_10	chr15	-	2046	17	ISM	ENSMUSG00000022565.16	ENSMUST00000071869.12	14917	32	40	17275	40	215	5prime_fragment	FALSE	canonical	3	21	junction_16	9.19047570858005	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGGAGATCC	NA	False	NA	NA	False	AATGAA	-4	NA	76093325	76072448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76093164
Isoform_20657_11	chr15	-	2017	17	ISM	ENSMUSG00000022565.16	ENSMUST00000074834.12	14855	32	-3	17285	-3	204	5prime_fragment	FALSE	canonical	3	10	junction_16	11.3247516529061	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATGAAGGAAAAGAAAAT	5604	False	NA	NA	False	NA	NA	NA	76113700	76072459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
Isoform_20658_7	chr15	-	2132	16	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	12	17487	12	1	5prime_fragment	FALSE	canonical	3	16	junction_15	10.3965806344629	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCAGCGTTTCCTCCTT	1040	False	NA	NA	False	AAGAAA	-14	NA	76079898	76072662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
Isoform_20660_5	chr15	-	3279	11	FSM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	1	4	1	-4	multi-exon	FALSE	canonical	1	1	junction_2	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTAGAAGGACCGGC	NA	False	NA	NA	False	AATAAA	-12	NA	76127640	76117206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
Isoform_20661_3	chr15	-	4499	26	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	7.34019073321668	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9182	False	NA	-19	True	AATAAA	-17	NA	76191446	76180802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_76180981_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
Isoform_20662_3	chr15	-	4091	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-121	0	23	0	multi-exon	FALSE	canonical	2	7	junction_11	7.05305339056621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9062	False	NA	-19	True	AATAAA	-17	NA	76191566	76180802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
Isoform_20663_5	chr15	-	3987	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-16	-1	-16	-1	multi-exon	TRUE	canonical	2	7	junction_11	7.05305339056621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATTGGGTTATTGGGCT	9167	False	NA	-18	True	AATAAA	-18	NA	76191461	76180801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
Isoform_20664_61	chr15	-	1327	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	407	0	8	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8520	False	NA	-3	True	ATTAAA	-16	NA	76234904	76231239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
Isoform_20665_5	chr15	-	1743	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8104	False	NA	-3	True	ATTAAA	-16	NA	76235320	76231239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
Isoform_20667_5	chr15	-	1175	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8497	False	NA	-3	True	ATTAAA	-16	NA	76234927	76231239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
Isoform_20669_643	chr15	-	2457	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	28	6	28	-6	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGACCCTGGCTGGCAG	NA	False	NA	-40	True	AATAAA	-14	NA	76361449	76337194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_20671_473	chr15	-	2494	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	-2	-1	-2	1	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	False	NA	-33	True	AATAAA	-21	NA	76361479	76337187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_20675_24	chr15	-	2531	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	26	-6	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGACCCTGGCTGGCAG	NA	False	NA	-40	True	AATAAA	-14	NA	76361451	76337194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
Isoform_20679_6	chr15	-	1780	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	109	-1	-16	1	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	-4	True	AATAAA	-19	NA	76396042	76386213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
Isoform_20680_62	chr15	-	2101	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	158	junction_6	11.5325625946708	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422956	76419929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
Isoform_20681_43	chr15	-	1950	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	0	3	0	0	multi-exon	FALSE	canonical	3	133	junction_7	19.025224930956	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422935	76419929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
Isoform_20682_144	chr15	-	1702	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	0	8	0	1	multi-exon	TRUE	canonical	3	128	junction_8	22.8988946239769	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	76422935	76419928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
Isoform_20683_8	chr15	-	2211	6	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	-29	0	intron_retention	FALSE	canonical	3	158	junction_5	12.595237195067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422975	76419929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421621_76421922
Isoform_20684_3	chr15	-	2054	7	NIC	ENSMUSG00000022559.9	novel	1953	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	133	junction_6	20.4565936123838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422948	76419929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421621_76421922_76421987_76422116
Isoform_20685_4	chr15	-	2221	7	NIC	ENSMUSG00000022559.9	novel	1953	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	133	junction_6	20.5399340040052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422945	76419929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
Isoform_20686_22	chr15	-	4392	37	FSM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	19	-1	-3	1	multi-exon	TRUE	canonical	3	40	junction_1	98.8724822532214	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491692	76480007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_20699_79	chr15	-	4509	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	7	2	7	1	multi-exon	FALSE	canonical	3	484	junction_25	49.8187687746518	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491784	76480007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_2070_14	chr10	-	3047	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	135.429996494932	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546192	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
Isoform_20700_319	chr15	-	4456	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	60	2	-20	1	multi-exon	FALSE	canonical	3	484	junction_25	49.8187687746518	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491731	76480007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
Isoform_20702_255	chr15	-	2221	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	536	-7	0	-1	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8666	False	NA	-3	True	AATAAA	-20	NA	76501048	76496583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_20703_199	chr15	-	2243	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	514	-7	-22	-1	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8644	False	NA	-3	True	AATAAA	-20	NA	76501070	76496583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_20706_21	chr15	-	1936	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8666	False	NA	-3	True	AATAAA	-20	NA	76501048	76496583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
Isoform_20708_7	chr15	-	2351	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-22	4	intron_retention	FALSE	canonical	3	334	junction_10	42.1835275907551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTACACTGTCTTCTTG	8644	False	NA	-6	True	AATAAA	-17	NA	76501070	76496586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_20709_8	chr15	-	2119	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	-57	1	-57	-1	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8609	False	NA	-3	True	AATAAA	-20	NA	76501105	76496583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_20710_15	chr15	-	2062	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	0	1	0	-1	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	8666	False	NA	-3	True	AATAAA	-20	NA	76501048	76496583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
Isoform_20712_177	chr15	-	901	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	10	0	5	0	multi-exon	TRUE	canonical	3	892	junction_9	85.8889607589177	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9613	False	NA	-25	True	AATAAA	-17	NA	76510264	76506308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
Isoform_20713_13	chr15	-	998	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	-57	0	6	0	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9614	False	NA	-25	True	AATAAA	-17	NA	76510263	76506308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
Isoform_20716_4	chr15	-	4204	25	ISM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	111	0	-7	0	3prime_fragment	FALSE	canonical	3	178	junction_21	25.5473076968113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524047	76510437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877
Isoform_20717_135	chr15	-	4188	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	48	-1	19	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524110	76510436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_20718_96	chr15	-	4222	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	14	-1	14	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524144	76510436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_20719_4	chr15	-	4371	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_22	45.7890816680134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524135	76510439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_20720_4	chr15	-	4519	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-25	1	intron_retention	FALSE	canonical	3	182	junction_12	25.1047458439413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524183	76510436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
Isoform_20721_19	chr15	-	1125	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	-16	1	-16	-1	multi-exon	FALSE	canonical	3	19	junction_2	30	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTATGGAATTTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	76544333	76542340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76543066_76543418_76543640_76544154
Isoform_20722_7	chr15	-	1679	3	FSM	ENSMUSG00000033837.6	ENSMUST00000230207.2	507	3	-77	-1095	69	395	multi-exon	FALSE	canonical	3	24	junction_2	159.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAAGTCTGGTATTGGG	NA	False	NA	-5	True	AGTAAA	-19	NA	76554079	76552029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76553341_76553428_76553522_76553804
Isoform_20724_57	chr15	-	1691	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	69	-395	69	395	multi-exon	FALSE	canonical	3	304	junction_2	19.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAAGTCTGGTATTGGG	NA	False	NA	-5	True	AGTAAA	-19	NA	76554079	76552029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76553341_76553428_76553534_76553804
Isoform_20725_3	chr15	-	3873	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	23	0	23	0	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	-5	True	AATAAA	-19	NA	76594710	76587752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
Isoform_20726_22	chr15	-	2186	2	FSM	ENSMUSG00000033707.10_ENSMUSG00000116138.2	ENSMUST00000230559.2	740	2	-453	-993	2	0	multi-exon	FALSE	canonical	3	37	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTATTGACTTTAAATG	9311	False	NA	-5	True	ATTAAA	-22	NA	76608038	76605665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76607184_76607370
Isoform_20727_4	chr15	-	3228	2	FSM	ENSMUSG00000033707.10_ENSMUSG00000116138.2	ENSMUST00000230559.2	740	2	-453	-2035	2	-796	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAAAGGAAAGAAA	9311	False	NA	NA	False	NA	NA	NA	76608038	76604623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76607184_76607370
Isoform_20728_34	chr15	-	1754	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9309	False	NA	-4	True	ATTAAA	-23	NA	76608040	76605664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76607184_76607370_76607420_76607854
Isoform_20729_3	chr15	-	2784	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	13	-1043	-3	1043	multi-exon	FALSE	canonical	3	37	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGGAAAGAAAAA	9322	False	NA	NA	False	NA	NA	NA	76608027	76604621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76607184_76607370_76607420_76607854
Isoform_2073_17	chr10	-	2930	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	136.92187553492	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTGTCTTACACAT	NA	False	NA	-18	True	AATAAA	-22	NA	117546598	117524798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
Isoform_20732_21	chr15	-	4583	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	4	0	4	0	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8173	False	NA	-4	True	AATAAA	-17	NA	76702366	76608184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_20733_21	chr15	-	4492	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	3	-1	3	1	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTTCTTTCAGG	8172	False	NA	-3	True	AATAAA	-18	NA	76702367	76608183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_20735_21	chr15	-	2791	5	ISM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-37	2408	4	-2408	5prime_fragment	FALSE	canonical	3	59	junction_3	12.5573683548744	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAGAAAAA	8173	False	NA	NA	False	NA	NA	NA	76702366	76620064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
Isoform_20737_3	chr15	-	546	3	FSM	ENSMUSG00000033697.17	ENSMUST00000177026.3	371	3	-179	4	-5	-4	multi-exon	FALSE	canonical	2	6	junction_1	42	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAGTTCAGCCCATG	8164	False	NA	NA	False	NA	NA	NA	76702375	76642248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76642444_76649684_76649852_76702191
Isoform_20738_10	chr15	-	584	3	FSM	ENSMUSG00000033697.17	ENSMUST00000176219.9	542	3	-48	6	-13	-2	multi-exon	FALSE	canonical	3	22	junction_1	34	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTTCAGCCCATGTT	8185	False	NA	NA	False	NA	NA	NA	76702354	76642246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76642501_76649684_76649852_76702191
Isoform_20739_13	chr15	-	4011	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	18	7	0	-7	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATATCAGTCTGTAG	NA	False	NA	NA	False	ATTAAA	-10	NA	76755617	76735815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
Isoform_20740_3	chr15	-	2504	7	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	10.0567832276971	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGATGGCTCTGAGTT	8504	False	NA	NA	False	ATTAAA	-21	NA	76809629	76794573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76809575
Isoform_20742_3	chr15	-	1771	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	49.3316274559802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGTGCATTTCCACG	NA	False	NA	NA	False	TTTAAA	-20	NA	77190824	76968006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
Isoform_20743_4	chr15	-	2135	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	77191194	76968015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_20744_6	chr15	-	1765	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	77190824	76968015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_20745_3	chr15	-	3235	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	314	3358	-9	1141	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTGCATCAAGCATCC	NA	False	NA	-10	True	ATTAAA	-11	NA	77190814	76966547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_20746_5	chr15	-	2072	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	30	4805	30	1	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGTCTGTATGTCCA	NA	False	NA	NA	False	AAAAAG	-9	NA	77191098	76967994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
Isoform_20749_3	chr15	-	1720	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-13	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	77190818	76968015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
Isoform_2075_64	chr10	-	3535	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-45	-1	-45	1	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	117582315	117569582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
Isoform_20758_13	chr15	-	2516	9	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	74953	1	-32	-1	3prime_fragment	FALSE	canonical	3	518	junction_1	37.367892300744	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	8424	False	NA	-3	True	AATAAA	-16	NA	77651422	77644787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330
Isoform_2076_6	chr10	-	3465	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	36	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.0613955098562	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGATAAGCAGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	117582234	117569580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_117572139_117576416_117576500_117576657_117576817_117580632_117580753_117581689
Isoform_2077_12	chr10	-	3100	28	FSM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	-1	-1	-1	1	multi-exon	FALSE	non_canonical	0	0	junction_26	174.04731866881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117628604	117586527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625960_117626371_117626464_117628508
Isoform_20773_5	chr15	-	7376	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_36	103.368019715964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTGTCTGGGTGTTT	NA	False	NA	-2	True	AATAAA	-17	NA	77726315	77644786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680157_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
Isoform_20774_11	chr15	-	7415	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	17	1	17	-1	multi-exon	FALSE	canonical	3	307	junction_27	78.3427565254121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	77726358	77644787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
Isoform_20775_3	chr15	-	3716	8	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-1181	-4	intron_retention	FALSE	canonical	0	0	junction_7	189.038490843553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCTTTGGTGTCTGGGT	7275	False	NA	-6	True	AATAAA	-13	NA	77652571	77644790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_77646217_77647151_77647325_77647421_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652543
Isoform_20776_12	chr15	-	2984	22	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	66	14513	-4	-1065	5prime_fragment	FALSE	canonical	3	307	junction_8	39.70594865101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAGATGCAGCAGAAC	NA	False	NA	NA	False	NA	NA	NA	77726309	77659299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
Isoform_20778_5	chr15	-	2986	3	FSM	ENSMUSG00000022443.18	ENSMUST00000134878.2	2980	3	-5	-1	-5	1	multi-exon	FALSE	canonical	3	373	junction_2	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCATCCCTAG	NA	False	NA	NA	False	NA	NA	NA	77726310	77689744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77692225_77697079_77697432_77726156
Isoform_2078_9	chr10	-	3205	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	-93	2	-93	1	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117628703	117586527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_20780_11	chr15	-	804	5	NIC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	503.602211571792	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCTGCTGTTCTGTGG	2739	False	NA	-7	True	AATAAA	-17	NA	77813182	77799248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_77799437_77799904_77800058_77808742_77808867_77811891_77812155_77813106
Isoform_20782_609	chr15	-	1274	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	24	0	-8	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	2739	False	NA	-5	True	AATAAA	-19	NA	77813182	77799246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
Isoform_20784_32	chr15	-	1296	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	2	0	2	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	16	True	NA	-5	True	AATAAA	-19	NA	77813204	77799246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
Isoform_20788_12	chr15	-	4781	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	7	5	7	-1	multi-exon	TRUE	canonical	3	38	junction_8	9.62337648645214	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTTCTGCTCTGGCAT	8666	False	NA	-3	True	AATAAA	-18	NA	77840915	77824726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
Isoform_2079_357	chr10	-	3105	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	9	0	2	0	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628601	117586525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_20800_67	chr15	-	1829	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	123	-3	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	3036	False	NA	-14	True	AATAAA	-21	NA	77854722	77843200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
Isoform_20803_3260	chr15	-	1856	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	40	3	24	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	3260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2785	False	NA	-14	True	AATAAA	-21	NA	77854973	77843200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
Isoform_20805_276	chr15	-	1902	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	-6	3	-6	-3	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2739	False	NA	-14	True	AATAAA	-21	NA	77855019	77843200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
Isoform_20818_44	chr15	-	985	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	27	1	27	-1	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGGCTTCTGTTCTTAG	NA	False	NA	-3	True	AATAAA	-13	NA	78058280	78043663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
Isoform_20820_319	chr15	-	1101	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	42	1	-13	-1	multi-exon	FALSE	canonical	3	371	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTGCCTCCTTGCC	8126	False	NA	-4	True	AATAAA	-16	NA	78290065	78283756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78284231_78289438
Isoform_20822_52	chr15	-	1647	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-506	3	-506	-3	multi-exon	FALSE	canonical	3	371	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTGTCTGCCTCCTTG	7578	False	NA	-6	True	AATAAA	-14	NA	78290613	78283758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78284231_78289438
Isoform_20825_3	chr15	-	2189	3	FSM	ENSMUSG00000022440.10	ENSMUST00000147093.2	2191	3	-2	4	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTCAGCCTGGTACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	78413827	78407549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78409388_78411427_78411669_78413717
Isoform_20826_11	chr15	-	2403	3	FSM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	-2	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCCTGGTACTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	78413827	78407546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78409599_78411427_78411669_78413717
Isoform_20827_8	chr15	-	1328	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	1	1709	-1	1019	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATAAATGTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	78456982	78445075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
Isoform_20828_223	chr15	-	1886	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657696	78640081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
Isoform_20829_7	chr15	-	3322	7	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	144	junction_4	12.3017613914973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657685	78640081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_78640845_78641496_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
Isoform_2083_9	chr10	-	2999	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	-24	139	-24	-136	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGTTTGTTTGTTTG	NA	False	NA	-20	True	AATATA	-15	NA	117628634	117586664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
Isoform_20830_92	chr15	-	1899	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	1	4	1	-4	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTGTTTTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	78947084	78937297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_20831_47	chr15	-	1916	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	-22	10	-14	0	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGTTGTTGTTTTT	NA	False	NA	-10	True	NA	NA	NA	78947107	78937303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_20832_12	chr15	-	1975	7	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	102	junction_5	6.51707159867238	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTTGTTGTTTTTTGT	NA	False	NA	-7	True	NA	NA	NA	78947085	78937300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_78938285_78938695_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
Isoform_20835_36	chr15	-	3562	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	-245	1	-6	-1	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212409	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
Isoform_20836_8	chr15	-	3170	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	55.3629733985577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212391	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
Isoform_20837_7	chr15	-	3084	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_17	53.5349706228067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212426	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
Isoform_20839_42	chr15	-	3106	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	53.1124617556935	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212407	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
Isoform_20840_84	chr15	-	3031	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212453	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
Isoform_20843_8	chr15	-	3361	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	3	1	3	-1	multi-exon	FALSE	canonical	3	30	junction_8	51.9652020319581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212373	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
Isoform_20845_4	chr15	-	3021	17	FSM	ENSMUSG00000042632.18	ENSMUST00000173163.8	3018	17	-4	1	-4	-1	multi-exon	FALSE	canonical	0	0	junction_16	64.3206991857987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212407	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
Isoform_20846_22	chr15	-	2951	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	11	1	11	-1	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212417	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
Isoform_20848_33	chr15	-	2866	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	51.8533830461748	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTACAGTGTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	79212453	79170428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
Isoform_20849_30	chr15	-	3359	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	-24	-20	-4	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287480	79244883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
Isoform_20850_6	chr15	-	3452	9	NIC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	111.157545852722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	4424	False	NA	-3	True	AATATA	-34	NA	79281085	79244883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79280875
Isoform_20851_356	chr15	-	3340	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	287	0	-6	0	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287482	79244883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
Isoform_20855_8	chr15	-	2771	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	-74	-2	63	2	multi-exon	TRUE	canonical	3	59	junction_10	149.550794046705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8082	False	NA	-2	True	AATAAA	-26	NA	79326274	79302053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
Isoform_20856_10	chr15	-	1446	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	-61	1310	-58	0	multi-exon	FALSE	canonical	3	59	junction_10	149.550794046705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8095	False	NA	NA	False	NA	NA	NA	79326261	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
Isoform_20857_3	chr15	-	1335	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	165.344156231782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8041	False	NA	NA	False	NA	NA	NA	79326315	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326292
Isoform_20858_4	chr15	-	2701	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	2	30	junction_10	157.551927947582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8423	False	NA	-8	True	AATAAA	-20	NA	79339773	79302059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79339690
Isoform_20859_19	chr15	-	2756	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-58	-1306	-58	-4	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8095	False	NA	-8	True	AATAAA	-20	NA	79326261	79302059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_20860_65	chr15	-	1453	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-61	0	-61	0	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8092	False	NA	NA	False	NA	NA	NA	79326264	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_20863_8	chr15	-	1339	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8041	False	NA	NA	False	NA	NA	NA	79326315	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
Isoform_20864_3	chr15	-	2639	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	17	-15	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAGTGATATAGATAC	8036	False	NA	-19	True	AATAAA	-9	NA	79326320	79302070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
Isoform_20865_6	chr15	-	2713	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8421	False	NA	-2	True	AATAAA	-26	NA	79339775	79302053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
Isoform_20866_11	chr15	-	1389	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8433	False	NA	NA	False	NA	NA	NA	79339763	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
Isoform_20867_3	chr15	-	3041	11	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	164.785587962054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAATAC	8349	False	NA	NA	False	NA	NA	NA	79326007	79303365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79324282
Isoform_20869_11	chr15	-	1566	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	58	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGTACCTCTCTTTT	8077	False	NA	0	True	ATTAAA	-19	NA	79326279	79307842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_20870_3	chr15	-	2708	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	-58	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGTGTGCGTTTCTTA	8095	False	NA	-2	True	AATAAA	-13	NA	79326261	79306682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_20871_3	chr15	-	3390	7	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-58	3315	-58	0	5prime_fragment	FALSE	canonical	3	332	junction_6	88.6561710580074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGCGTTTCTTAAG	8095	False	NA	0	True	AATAAA	-15	NA	79326261	79306680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
Isoform_20872_5	chr15	-	2745	2	FSM	ENSMUSG00000044216.8	ENSMUST00000057801.8	2152	2	-598	5	-598	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTAGGCTGGTAGAGA	6830	False	NA	NA	False	AATAAA	-14	NA	79390040	79367919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79370021_79389396
Isoform_20873_17	chr15	-	4579	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	151	2	-31	-2	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGAATTTTTTATTA	NA	False	NA	-42	True	AATAAA	-13	NA	79430791	79411938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
Isoform_20876_41	chr15	-	4542	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	182	2	0	-2	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGAATTTTTTATTA	NA	False	NA	-42	True	AATAAA	-13	NA	79430760	79411938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
Isoform_20882_9	chr15	-	2208	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	9	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGATTCTGCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	79489300	79445699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_20885_5	chr15	-	2041	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	-110	0	-4	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTTTTGATTCTGCA	NA	False	NA	NA	False	AGTAAA	-12	NA	79489300	79445701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_20887_3	chr15	-	812	7	NIC	ENSMUSG00000022429.12	novel	1931	12	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.9066695427091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGATGTGAAGCTTATA	NA	False	NA	-6	True	ATTAAA	-13	NA	79489300	79446585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79446784_79452839_79452957_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
Isoform_20888_339	chr15	-	3385	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	59	-4	59	4	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTACTTGTCTGATTATG	NA	False	NA	1	True	ATTAAA	-19	NA	79572061	79558447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
Isoform_20889_96	chr15	-	3413	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	26	1	26	-1	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAGTCTACTTGTCTGA	NA	False	NA	-4	True	ATTAAA	-14	NA	79572094	79558452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
Isoform_20892_12	chr15	-	3812	18	FSM	ENSMUSG00000042524.15	ENSMUST00000100439.10	3768	18	-43	-1	-11	0	multi-exon	FALSE	canonical	0	0	junction_6	1.19108569007745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTGTGCTTTTTTCTG	NA	False	NA	0	True	AATAAA	-16	NA	79626748	79608270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620121_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_20894_28	chr15	-	3775	18	FSM	ENSMUSG00000042524.15	ENSMUST00000046259.14	3804	18	32	-3	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.14366012324845	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTGTGCTTTTTTCTG	NA	False	NA	0	True	AATAAA	-16	NA	79626705	79608270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620127_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_20895_4	chr15	-	2211	8	ISM	ENSMUSG00000042524.15	ENSMUST00000159762.8	1783	9	-63	3398	-31	1097	5prime_fragment	FALSE	canonical	0	0	junction_2	1.35526185435788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79626768	79617211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_79618437_79620046_79620121_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_20896_4	chr15	-	2194	8	ISM	ENSMUSG00000042524.15	ENSMUST00000046259.14	3804	18	-8	8938	-8	1097	5prime_fragment	FALSE	canonical	0	0	junction_3	1.27775312999988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	79626745	79617211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_79618437_79620046_79620127_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
Isoform_20897_18	chr15	-	1491	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2544	-675	-12	-9	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAACTTAGTCTGTG	282	False	NA	NA	False	ATTAAA	-8	NA	79658629	79645662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
Isoform_20898_28	chr15	-	1466	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	-3	9	-3	-9	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAACTTAGTCTGTG	240	False	NA	NA	False	ATTAAA	-8	NA	79658671	79645662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
Isoform_2090_95	chr10	-	2072	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	51	601	51	-601	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAATAGGTGTTATT	8656	False	NA	-22	True	AATAAA	-17	NA	117681889	117650376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_20900_17	chr15	-	4963	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	-16	1	-16	-1	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCTCTTCTGTCATA	NA	False	NA	-3	True	AATAAA	-15	NA	79688926	79670553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
Isoform_20902_6	chr15	-	4520	8	FSM	ENSMUSG00000089837.10	ENSMUST00000023060.13	1162	8	-39	-3319	-39	3319	multi-exon	FALSE	canonical	2	3	junction_4	65.4759653675784	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGGAGGCTCTTCTGTC	NA	False	NA	-6	True	AATAAA	-12	NA	79718477	79670556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_20903_21	chr15	-	3091	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	0	-35	0	-6	multi-exon	FALSE	canonical	2	10	junction_1	62.5114989421946	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79718438	79710306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_20904_107	chr15	-	3168	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	394	2244	-14	1	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718495	79710340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_20905_76	chr15	-	3145	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	451	2210	0	-6	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79718438	79710306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_20906_23	chr15	-	3205	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	357	2244	-6	1	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718532	79710340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
Isoform_20908_60	chr15	-	2978	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-79	0	37	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816932	79800007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_2091_35	chr10	-	2675	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	51	-2	51	2	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTCGTACTCGTTATG	8656	False	NA	-8	True	ATTAAA	-14	NA	117681889	117649773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_20913_99	chr15	-	2960	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_2092_114	chr10	-	1999	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	51	674	51	-674	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACTTGCCACTGAATG	8656	False	NA	12	True	AATAAA	-30	NA	117681889	117650449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_20920_34	chr15	-	3044	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	14	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	153.192326468687	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816955	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_20923_53	chr15	-	2992	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855324	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_20926_59	chr15	-	3233	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-214	-2309	14	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816955	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_20928_84	chr15	-	3116	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-97	-2309	2	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816838	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_20929_71	chr15	-	3209	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-190	-2309	38	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816931	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
Isoform_20930_14	chr15	-	3025	6	FSM	ENSMUSG00000053411.17	ENSMUST00000146719.9	714	6	36	-2347	-33	6	multi-exon	FALSE	canonical	3	28	junction_5	171.122646075848	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818064	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79817965
Isoform_20931_221	chr15	-	3180	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-10	-2642	-9	0	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855329	79800007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_20934_26	chr15	-	3137	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-4	6	intron_retention	FALSE	canonical	3	17	junction_4	180.403021039006	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855324	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
Isoform_2094_63	chr10	-	2125	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	0	599	0	-599	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAATAGGTGTTATTTT	8605	False	NA	-20	True	AATAAA	-19	NA	117681940	117650374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
Isoform_20941_14	chr15	-	3465	6	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-9	6	intron_retention	FALSE	canonical	3	31	junction_2	172.968205170777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
Isoform_20944_4	chr15	-	2193	7	NIC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	-23	-15	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	5.6494837522261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79897427	79880089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897290
Isoform_20946_3	chr15	-	2735	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	194	15	194	-15	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCACAAAACAAAACCACG	NA	False	NA	NA	False	TTTAAA	-17	NA	79898815	79880089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_20947_6	chr15	-	2297	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	656	-9	656	9	multi-exon	TRUE	canonical	2	5	junction_6	4.63381292481928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTTGGCATCGGGT	NA	False	NA	NA	False	AAAAAG	-23	NA	79898353	79880065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
Isoform_20948_3	chr15	-	2150	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	253	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	4.63381292481928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAACCACGTGAATCT	NA	False	NA	NA	False	AAAAAG	-6	NA	79897151	79880082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897064
Isoform_20949_4	chr15	-	2151	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	248	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.23609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAACCACGTGAATCT	NA	False	NA	NA	False	AAAAAG	-6	NA	79897156	79880082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889673_79889767_79897064
Isoform_20951_1549	chr15	-	1291	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	54	6	1	-2	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
Isoform_20958_108	chr15	-	1472	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
Isoform_20960_73	chr15	-	1875	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	1	1	1	-1	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
Isoform_20963_32	chr15	-	2390	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5307.90272968101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
Isoform_20972_30	chr15	-	2599	4	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	1	1187	intron_retention	FALSE	canonical	3	16287	junction_3	6785.68278722848	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr15_-_79964754_79965096_79965985_79966590_79966784_79967524
Isoform_20978_132	chr15	-	805	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	27	6	-4	-6	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGATTCAAGTGTGTG	NA	False	NA	-11	True	AATAAA	-19	NA	80148489	80144821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
Isoform_20980_4	chr15	-	981	3	NIC	ENSMUSG00000051518.9	novel	838	4	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	697	junction_2	77.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGATTCAAGTGTGTG	NA	False	NA	-11	True	AATAAA	-19	NA	80148499	80144821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_80145596_80148183_80148319_80148427
Isoform_20981_157	chr15	-	1686	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	31	7	-4	-7	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGAAAGTTGCT	6879	False	NA	-17	True	AATAAA	-20	NA	81244982	81203118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
Isoform_20992_328	chr15	-	3006	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	339	1	-110	-1	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGACCTTCCCCCATT	NA	False	NA	-20	True	AATAAA	-17	NA	81283905	81247870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_20993_111	chr15	-	3042	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	303	1	-146	-1	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGACCTTCCCCCATT	NA	False	NA	-20	True	AATAAA	-17	NA	81283941	81247870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_210_3	SIRV12003	+	5464	1	FSM	SIRV12003A	SIRV12003	12000	1	0	6536	0	-6536	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTTATAAGTATGAGT	NA	False	NA	NA	False	ACTAAA	-8	NA	0	5464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12003_+_0_5500
Isoform_21001_12	chr15	-	1724	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	245	1377	-204	404	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATACGGTTCCTGAAGTA	NA	False	NA	-32	True	AATAAA	-23	NA	81283999	81249246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
Isoform_2101_47	chr10	-	2405	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-16	3740	-16	1395	multi-exon	FALSE	canonical	3	29	junction_2	3.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAACTGTTTTTGTTT	NA	False	NA	-3	True	TATAAA	-34	NA	118705070	118695247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_118697059_118704054_118704204_118704625
Isoform_21014_7	chr15	-	2164	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2157	37	405	-21	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAACAAAAA	7152	False	NA	NA	False	NA	NA	NA	81579331	81570402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
Isoform_2102_11	chr10	-	3831	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-37	2335	-37	-2335	multi-exon	FALSE	canonical	3	29	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAGA	NA	False	NA	NA	False	AAGAAA	-45	NA	118705091	118693842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_118697059_118704054_118704204_118704625
Isoform_21024_1465	chr15	-	2910	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	123	0	0	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614081	81588453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
Isoform_21027_53	chr15	-	2600	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	69	364	-33	-6	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81614135	81588817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
Isoform_21029_39	chr15	-	2964	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	69	0	-33	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614135	81588453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
Isoform_2104_230	chr10	-	4390	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-14	3390	-14	-3390	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	212	False	NA	-29	True	ATTAAA	-15	NA	119075974	119038549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_21046_21	chr15	-	3994	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	157	0	-5	0	multi-exon	FALSE	canonical	3	45	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTGCCTACTTGTTTG	NA	False	NA	-8	True	ATTAAA	-17	NA	81742529	81732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81736074_81742136
Isoform_2105_19	chr10	-	4532	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-33	3267	-33	-3267	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGTATTCATTTAAGA	193	False	NA	0	True	CATAAA	-18	NA	119075993	119038426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_21050_4	chr15	-	857	4	FSM	ENSMUSG00000061360.9	ENSMUST00000160415.2	471	4	-18	-368	-18	151	multi-exon	FALSE	canonical	3	15	junction_3	625.5474047229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAACGTCTACTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	81755884	81749518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81755793
Isoform_21051_349	chr15	-	864	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	1	798	1	151	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAACGTCTACTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	81756111	81749518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
Isoform_21053_101	chr15	-	1464	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	27	1051	27	321	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCCCTTTTCATTAGCT	455	False	NA	1	True	AATAAA	-20	NA	81810414	81800280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
Isoform_21054_7	chr15	-	2554	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	27	-39	27	39	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAGAAACCAAACTGAA	455	False	NA	NA	False	AATAAA	-20	NA	81810414	81799190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
Isoform_21057_1535	chr15	-	1229	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	70	1	-2	-1	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGGTGTTTGCTCTGT	NA	False	NA	-4	True	ATTAAA	-13	NA	81845061	81835309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_2106_23	chr10	-	4444	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-9	3331	-9	-3331	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATGTTTCTTTCCTTG	217	False	NA	-5	True	TTTAAA	-19	NA	119075969	119038490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_21063_19	chr15	-	2241	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-27	-1602	-2	1602	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	81845061	81838141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_21064_43	chr15	-	619	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-27	20	-2	-20	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTTCCGACTTGGA	NA	False	NA	-24	True	NA	NA	NA	81845061	81839763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
Isoform_21066_76	chr15	-	2980	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-46	0	16	0	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900410	81876723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
Isoform_21067_84	chr15	-	1503	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-46	1477	16	-153	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTGTCTGAGAATTAG	NA	False	NA	-4	True	AATAAA	-29	NA	81900410	81878200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
Isoform_21069_3	chr15	-	1385	5	FSM	ENSMUSG00000022472.17	ENSMUST00000146628.8	2854	5	-8	1477	2	-153	multi-exon	FALSE	canonical	1	1	junction_3	75.5016556109864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTGTCTGAGAATTAG	NA	False	NA	-4	True	AATAAA	-29	NA	81900362	81878200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81887958_81887981_81900078
Isoform_2107_22	chr10	-	4427	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-54	3393	-54	-3393	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACCATGGATTTCTTG	172	False	NA	-32	True	ATTAAA	-12	NA	119076014	119038552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_21072_416	chr15	-	1248	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	10	819	-9	134	multi-exon	FALSE	canonical	3	3045	junction_2	110	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATATGGCAGCTGTG	4916	False	NA	-26	True	AATAAA	-21	NA	81931789	81925544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81926570_81928097_81928219_81931687
Isoform_21079_189	chr15	-	1791	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	12	785	12	241	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCGATCATCAGTCA	NA	False	NA	-5	True	AATAAA	-25	NA	82097004	82091153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
Isoform_2108_3	chr10	-	4574	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-76	3268	-76	-3268	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGAGTATTCATTTAAG	150	False	NA	-1	True	CATAAA	-17	NA	119076036	119038427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
Isoform_21080_40	chr15	-	1839	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	-39	788	-39	238	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097055	82091156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
Isoform_21081_8	chr15	-	2035	3	NIC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-32	238	intron_retention	FALSE	canonical	3	79	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097048	82091156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82092099_82092663_82092798_82096089
Isoform_21082_83	chr15	-	974	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	1	-382	1	1	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTGTAGATGCAGAA	NA	False	NA	-16	True	AAAAAG	-15	NA	82128610	82118278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
Isoform_21083_15	chr15	-	1286	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	-11	-682	-11	1	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	82128622	82117978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
Isoform_21084_6	chr15	-	890	6	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	488.753271088798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATGTGTTGTAGATGC	NA	False	NA	-20	True	AAAAAG	-11	NA	82128622	82118282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
Isoform_21085_360	chr15	-	905	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	-2	299	-2	1	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTGTAGATGCAGAA	NA	False	NA	-16	True	AAAAAG	-15	NA	82128951	82118278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
Isoform_21086_21	chr15	-	1173	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	27	2	6	-2	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82128922	82117981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
Isoform_21089_12	chr15	-	883	4	ISM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	315	1	-2	-1	3prime_fragment	FALSE	canonical	3	56	junction_1	602.108148277552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTGTTGTAGATGCAG	NA	False	NA	-18	True	AAAAAG	-13	NA	82128613	82118280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333
Isoform_21092_13	chr15	-	1862	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	-15	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1354	False	NA	-15	True	AATAAA	-16	NA	82223017	82213747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
Isoform_21095_9	chr15	-	2791	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	10	-888	-9	888	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGTCTCAATAGTAG	1354	False	NA	NA	False	NA	NA	NA	82223017	82212844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_21097_304	chr15	-	1888	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	10	15	-9	-15	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1354	False	NA	-15	True	AATAAA	-16	NA	82223017	82213747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_21098_31	chr15	-	1980	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-83	16	16	-16	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTTTCTAATCAACC	1261	False	NA	-16	True	AATAAA	-15	NA	82223110	82213748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_2110_4	chr10	-	4543	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	7	4	7	-4	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGCCCAGTCTGTGGTT	NA	False	NA	-7	True	NA	NA	NA	119948885	119919516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
Isoform_21100_20	chr15	-	1815	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	7	-14	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTCTAATCAACCAG	1351	False	NA	-14	True	AATAAA	-17	NA	82223020	82213746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
Isoform_21101_29	chr15	-	1714	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	-17	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTCTAATCAAC	1354	False	NA	-17	True	AATAAA	-14	NA	82223017	82213749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
Isoform_21102_6	chr15	-	1606	8	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	2	27	junction_6	115.458624093443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTCTAATCAACCAG	1388	False	NA	-14	True	AATAAA	-17	NA	82222983	82213746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222952
Isoform_21105_6	chr15	-	1646	9	NNC	ENSMUSG00000022453.9	novel	1020	7	NA	NA	23	-1048	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.9882805346569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTTGAGCATCATTG	1313	False	NA	NA	False	NA	NA	NA	82223058	82215982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_82216123_82216151_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
Isoform_21110_878	chr15	-	515	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	69	6	1	-6	multi-exon	FALSE	canonical	3	3916	junction_1	175	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTTCCTGTGGTCTCTC	6281	False	NA	-19	True	AATAAA	-44	NA	82238454	82234346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82234573_82235179_82235296_82238281
Isoform_21111_76	chr15	-	523	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	36	31	-32	-1	multi-exon	FALSE	canonical	3	3916	junction_1	175	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGATAAAATTGCACTG	6248	False	NA	-44	True	AATAAA	-19	NA	82238487	82234371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_82234573_82235179_82235296_82238281
Isoform_21116_915	chr15	-	1872	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	832	junction_4	68.5907710814729	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
Isoform_21117_110	chr15	-	1895	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	832	junction_4	68.5907710814729	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006975	83000048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
Isoform_2112_14	chr10	-	4506	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	44	4	44	-4	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGCCCAGTCTGTGGTT	NA	False	NA	-7	True	NA	NA	NA	119948848	119919516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
Isoform_21122_1481	chr15	-	3182	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.638995176448	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033506	83010177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
Isoform_21124_174	chr15	-	3278	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	20	1	20	-1	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033565	83010177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
Isoform_21126_53	chr15	-	3140	9	NNC	ENSMUSG00000041815.15	novel	3157	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.479901297954	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033552	83010178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
Isoform_21127_251	chr15	-	3087	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	258.479901297954	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033498	83010177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
Isoform_21128_24	chr15	-	3115	8	NIC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	214.875664095328	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCTATAATGTCTT	NA	False	NA	-12	True	AATAAA	-16	NA	83033498	83010177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83021668_83021756_83022332_83022724_83033395
Isoform_21131_110	chr15	-	2012	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	409	1	409	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	-1	True	AGTAAA	-17	NA	83056384	83037695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
Isoform_21132_37	chr15	-	2047	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	374	1	374	-1	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCAGCGTTTCTCTGG	NA	False	NA	-1	True	AGTAAA	-17	NA	83056419	83037695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
Isoform_21135_3	chr15	-	1383	10	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	371	-648	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	514.932238140654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGAGAGAAGAGGAAGA	NA	False	NA	38	True	NA	NA	NA	83056422	83038342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83038424_83038443_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
Isoform_21139_29	chr15	-	2126	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	5	-157	3	-1	multi-exon	FALSE	canonical	3	30	junction_2	34	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGCCTCATGGTCAC	2271	False	NA	-9	True	AATAAA	-15	NA	83135927	83110923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83112796_83114714_83114859_83135817
Isoform_2114_3	chr10	-	2324	7	ISM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	31216	7	-65	-7	3prime_fragment	FALSE	canonical	2	13	junction_2	4.19324854180304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTTGTTTTGTTAA	NA	False	NA	NA	False	ATTAAA	-10	NA	120006348	119977559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222
Isoform_21140_44	chr15	-	2049	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	43	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2266	False	NA	-8	True	AATAAA	-16	NA	83135932	83110922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83112796_83114714_83114859_83135900
Isoform_21141_39	chr15	-	2128	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-36	0	-36	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2187	False	NA	-8	True	AATAAA	-16	NA	83136011	83110922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83112796_83114714_83114859_83135900
Isoform_21142_7	chr15	-	2127	3	NNC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	13701	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	45.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCCTCATGGTCACAT	5772	False	NA	-7	True	AATAAA	-17	NA	83122229	83110921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83112796_83114714_83114859_83122120
Isoform_21143_3	chr15	-	2516	16	FSM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	-60	5	13	-5	multi-exon	FALSE	canonical	3	13	junction_5	14.6272196796095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAAATGTGATTTCAGA	3538	False	NA	-113	True	AGTAAA	-21	NA	83234435	83184026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21144_5	chr15	-	2485	16	NNC	ENSMUSG00000054277.9	novel	2461	16	NA	NA	-22	-1	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_5	13.8381116245438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGATTTCAGATGAC	3576	False	NA	-109	True	AGTAAA	-25	NA	83234397	83184022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21145_16	chr15	-	2607	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	12	0	12	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3537	False	NA	-26	True	AATATA	-16	NA	83234436	83183939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21147_25	chr15	-	2517	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGATTTCAGATGAC	3547	False	NA	-109	True	AGTAAA	-25	NA	83234426	83184022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21148_21	chr15	-	2570	16	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	10.2515039547051	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3577	False	NA	-26	True	AATATA	-16	NA	83234396	83183939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21149_4	chr15	-	2899	14	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	5	5771	5	-2935	5prime_fragment	FALSE	canonical	3	20	junction_7	10.9787314558057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAAAAAGAAGAAGA	3530	False	NA	NA	False	AAAACA	-25	NA	83234443	83189710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_2115_11	chr10	-	2968	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	126	3	-35	-3	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTTTTGTTAACTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	120037438	119977555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
Isoform_21150_6	chr15	-	2885	14	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	21	-2936	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	9.68375691191152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAAAAGAAGAAG	3546	False	NA	NA	False	AAAACA	-24	NA	83234427	83189711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
Isoform_21151_9	chr15	-	2299	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTCCAGCTTAAGTCT	248	False	NA	NA	False	AATAAA	-18	NA	83251480	83241736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
Isoform_21152_11	chr15	-	2196	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	3	intron_retention	FALSE	canonical	3	28	junction_1	13	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGCTTAAGTCTCTGAT	247	False	NA	NA	False	AATAAA	-23	NA	83251481	83241731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_83243152_83249229_83249715_83251190
Isoform_21153_72	chr15	-	3201	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-21	6	-12	-2	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	NA	False	NA	-2	True	AATAAA	-25	NA	83317037	83260324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
Isoform_21154_21	chr15	-	3125	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	-36	14	-36	-14	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	NA	False	NA	-14	True	AATAAA	-13	NA	83317061	83260336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
Isoform_21155_9	chr15	-	3278	12	NIC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	37	junction_10	226.521303250812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	7104	False	NA	-2	True	AATAAA	-25	NA	83348810	83260324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
Isoform_21157_376	chr15	-	3143	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	23	527	-13	-12	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACAGTCCCTTTGCC	7130	False	NA	-12	True	AATAAA	-15	NA	83348784	83260334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
Isoform_21162_86	chr15	-	2042	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	18	0	-1	0	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395076	83367969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
Isoform_21164_14	chr15	-	2184	14	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	1	junction_13	28.6157981773258	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395094	83367969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83368155_83368174_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393853_83393998_83394934
Isoform_21165_627	chr15	-	1895	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	22	0	22	0	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	8073	False	NA	0	True	AATAAA	-23	NA	83439914	83430997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
Isoform_21169_282	chr15	-	3267	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-45	552	-45	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4626	False	NA	-1	True	AGTAAA	-17	NA	83479403	83459842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_2117_3	chr10	-	3548	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	170	-8	-7	8	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTTCAGTTTCCTTT	NA	False	NA	-5	True	AATAAA	-28	NA	120312204	120197171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
Isoform_21170_339	chr15	-	3188	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	34	552	34	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4705	False	NA	-1	True	AGTAAA	-17	NA	83479324	83459842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_21177_15	chr15	-	3738	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	34	2	34	-2	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTCAGGTACTTCACA	4705	False	NA	NA	False	AATATA	-17	NA	83479324	83459292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
Isoform_21179_103	chr15	-	2384	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-18	-1047	-18	-1	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTTTTGTCTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	83989828	83960298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_21180_33	chr15	-	1359	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-42	2	-42	-2	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAGTGCATTTCCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	83989852	83961347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_21181_3	chr15	-	2617	8	NNC	ENSMUSG00000018865.10	novel	1319	8	NA	NA	-31	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	27.9533138483086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAGTGCATTTCCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	83989841	83961347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_83961784_83962969_83963454_83963473_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_21182_5	chr15	-	1213	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	120	1050	-25	-2	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAGTGCATTTCCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	83989835	83961347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_21183_5	chr15	-	2250	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	128	5	-17	-5	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTGTGTTTTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	83989827	83960302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
Isoform_21184_3	chr15	-	3694	12	FSM	ENSMUSG00000016624.16	ENSMUST00000162044.8	2568	12	-378	-748	-80	-2	multi-exon	FALSE	canonical	1	4	junction_7	2.56163687338279	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTCGGTGGTCCTGT	NA	False	NA	-9	True	ATTAAA	-8	NA	84740330	84669586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84676143_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
Isoform_21185_4	chr15	-	2087	14	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	24919	3	-16130	-3	3prime_fragment	FALSE	canonical	3	109	junction_8	16.3591351169659	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATCTTTACTCTGGTCT	NA	False	NA	-9	True	TATAAA	-14	NA	84991246	84948892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118
Isoform_21186_6	chr15	-	1316	8	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-17	51215	-17	-45008	5prime_fragment	FALSE	canonical	3	89	junction_2	18.5988808089879	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAAATAGAAGAGCA	NA	False	NA	NA	False	AAAACA	-5	NA	85016182	85000104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
Isoform_21187_6	chr15	-	881	5	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-11	59043	-11	-52836	5prime_fragment	FALSE	canonical	3	115	junction_1	12.49749974995	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTGAAGTAAGTTTT	NA	False	NA	NA	False	AAAAAG	-40	NA	85016176	85007932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
Isoform_21190_4	chr15	-	3488	4	FSM	ENSMUSG00000022382.16	ENSMUST00000109424.4	3134	4	-364	10	-125	0	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGCAAGTGTGTGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	85466147	85419647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85465580
Isoform_21191_8	chr15	-	3420	4	FSM	ENSMUSG00000022382.16	ENSMUST00000109424.4	3134	4	-293	7	-54	-3	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAGTGTGTGTGACGT	NA	False	NA	NA	False	AATAAA	-14	NA	85466076	85419644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85465580
Isoform_21192_9	chr15	-	1556	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	-578	-272	-9	-3	multi-exon	FALSE	canonical	3	301	junction_1	22.0151463012778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTGGTTTGAGTCA	8114	False	NA	-3	True	ATTAAA	-12	NA	85695869	85691175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
Isoform_21194_8	chr15	-	1021	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	9	-269	9	-3	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTGGTTTGAGTCA	8147	False	NA	-3	True	ATTAAA	-12	NA	85695836	85691175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
Isoform_21195_35	chr15	-	970	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	26	1	-11	-1	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTTTGAGTCACT	8112	False	NA	-1	True	ATTAAA	-14	NA	85695871	85691173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
Isoform_21196_13	chr15	-	823	4	FSM	ENSMUSG00000064284.13	ENSMUST00000150995.8	566	4	27	-284	-11	-1	multi-exon	FALSE	canonical	3	9	junction_3	150.534602888062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTTTGAGTCACT	8112	False	NA	-1	True	ATTAAA	-14	NA	85695871	85691173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695839
Isoform_21197_3	chr15	-	2240	3	ISM	ENSMUSG00000064284.13	ENSMUST00000154814.2	421	4	24	-1253	9	-3	3prime_fragment	FALSE	canonical	3	306	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTGGTTTGAGTCA	8147	False	NA	-3	True	ATTAAA	-12	NA	85695836	85691175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_85692569_85693412_85693526_85695102
Isoform_21198_3	chr15	-	4129	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	391	-2	391	1	multi-exon	TRUE	canonical	3	13	junction_10	4.62105687767059	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCCCTCATCCTCAT	NA	False	NA	-12	True	AATAAA	-19	NA	86069951	86023327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
Isoform_21199_20	chr15	-	2082	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	29892	-1261	-15	-1	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88585082	88571237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
Isoform_212_3	SIRV12003	+	1217	1	FSM	SIRV12003A	SIRV12003	12000	1	10783	0	10783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	10783	12000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV12003_+_10800_12000
Isoform_21201_19	chr15	-	2213	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	29499	-999	-408	-263	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCTCTCATTCCTGCA	NA	False	NA	-3	True	AATAAA	-18	NA	88585475	88571499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
Isoform_21202_14	chr15	-	2476	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	29499	-1262	-408	0	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88585475	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
Isoform_21204_13	chr15	-	2097	7	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	23722	-1262	-6185	0	3prime_fragment	FALSE	canonical	3	347	junction_6	115.862945855102	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	8957	False	NA	-5	True	NA	NA	NA	88591252	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236
Isoform_21205_6	chr15	-	2400	8	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	18098	-1262	4367	0	3prime_fragment	FALSE	canonical	3	347	junction_6	109.926506060613	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	3333	False	NA	-5	True	NA	NA	NA	88596876	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818
Isoform_21206_6	chr15	-	2195	8	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	18041	-1000	4310	-262	3prime_fragment	FALSE	canonical	3	347	junction_6	109.926506060613	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	3276	False	NA	-2	True	AATAAA	-19	NA	88596933	88571498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818
Isoform_21208_12	chr15	-	2598	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7487	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	224.216549845211	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	7655	False	NA	-5	True	NA	NA	NA	88592554	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592298
Isoform_21209_10	chr15	-	2458	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7492	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTTTGTCCCGTGTTT	7650	False	NA	-8	True	NA	NA	NA	88592559	88571239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
Isoform_21210_10	chr15	-	2198	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7493	-264	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	7649	False	NA	-4	True	AATAAA	-17	NA	88592560	88571500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
Isoform_21212_12	chr15	-	2392	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-408	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	229.394613905577	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	NA	False	NA	-7	True	NA	NA	NA	88585475	88571238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162
Isoform_21213_6	chr15	-	2500	7	ISM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	27174	0	-6195	0	3prime_fragment	FALSE	canonical	3	209	junction_6	165.160191598608	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	8947	False	NA	-5	True	NA	NA	NA	88591262	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236
Isoform_21214_7	chr15	-	2233	7	ISM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	27174	267	-6195	-267	3prime_fragment	FALSE	canonical	3	209	junction_6	165.160191598608	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGCCCTCTCATTCC	8947	False	NA	-7	True	AATAAA	-14	NA	88591262	88571503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236
Isoform_21215_3	chr15	-	2814	8	ISM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	21534	5	4341	-5	3prime_fragment	FALSE	canonical	3	209	junction_6	153.741367768292	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTAGTTTTTGTCCCGTGT	3307	False	NA	-10	True	NA	NA	NA	88596902	88571241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818
Isoform_21216_6	chr15	-	2734	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7492	-262	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	7650	False	NA	-2	True	AATAAA	-19	NA	88592559	88571498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
Isoform_21217_5	chr15	-	3028	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7526	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	7616	False	NA	-7	True	NA	NA	NA	88592593	88571238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
Isoform_21218_6	chr15	-	2888	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7526	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	244.623158748141	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	7616	False	NA	-5	True	NA	NA	NA	88592593	88571236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592440
Isoform_2122_31	chr10	-	3488	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	32	2	32	-2	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTATGTCTTTATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	121312220	121246256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
Isoform_21220_19	chr15	-	2097	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	32	1	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9276	False	NA	-1	True	AATAAA	-16	NA	88703489	88689447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
Isoform_21221_4	chr15	-	5859	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-55	1831	-30	222	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGTGCTAAGGGCG	NA	False	NA	NA	False	AAAACA	-23	NA	89007345	88984390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_21222_4	chr15	-	6947	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-53	741	-28	0	multi-exon	TRUE	canonical	3	40	junction_22	13.0596920161065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGGGTTGTTACTTG	NA	False	NA	-2	True	ACTAAA	-17	NA	89007343	88983300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
Isoform_21223_15	chr15	-	2339	3	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-256	14737	-30	3292	5prime_fragment	FALSE	canonical	3	50	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89007345	88999349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89000459_89004712_89004877_89006279
Isoform_21225_3	chr15	-	3372	2	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-287	17989	-61	40	5prime_fragment	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	89007376	89002601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89004877_89006279
Isoform_21226_27	chr15	-	2375	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	39	-2	0	2	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTCTCCGTTACTG	NA	False	NA	-1	True	AATAAA	-19	NA	89012864	89007507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
Isoform_21227_25	chr15	-	2423	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	40	-2	40	1	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTCTGGATCCCATTG	NA	False	NA	-11	True	AATAAA	-30	NA	89033791	89026687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
Isoform_21231_6	chr15	-	4449	29	ISM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	6196	2	1305	-2	3prime_fragment	FALSE	canonical	3	244	junction_18	54.0220452921862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	NA	False	NA	-7	True	AATACA	-17	NA	89048695	89039753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622
Isoform_21232_6	chr15	-	6465	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	31	1	31	-1	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGACTGGGTTTCTCC	9174	False	NA	-6	True	AATACA	-18	NA	89064960	89039752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
Isoform_21234_34	chr15	-	1959	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	27	2599	23	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080624	89069014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_21235_4	chr15	-	2278	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	17	junction_19	26.5207805419452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGTCTGGTCCCTGAC	NA	False	NA	-5	True	AGTAAA	-13	NA	89080668	89069020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
Isoform_21236_7	chr15	-	2100	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080668	89069014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_21237_3	chr15	-	2134	20	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_15	30.8850069857479	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080657	89069015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_21238_3	chr15	-	2233	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	23	0	intron_retention	FALSE	canonical	3	8	junction_8	23.6476188345298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080624	89069014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
Isoform_21239_22	chr15	-	6188	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	-21	-2	-5	2	multi-exon	FALSE	canonical	3	242	junction_22	71.0688002923927	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTACGCCTGCATCAGCA	NA	False	NA	-13	True	TATAAA	-19	NA	89199479	89172483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
Isoform_2124_74	chr10	-	2991	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	30	3	-16	2	multi-exon	FALSE	canonical	3	107	junction_12	17.7	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTTGTGTGCTTTTGT	3908	False	NA	-3	True	AATAAA	-19	NA	121422662	121382362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
Isoform_21240_9	chr15	-	2854	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	165	junction_11	30.2002575412124	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239837	89235341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239021_89239558
Isoform_21241_207	chr15	-	2771	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	-2	137	-2	-2	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTAGTGGTTTTTCC	NA	False	NA	-5	True	AATAAA	-19	NA	89239864	89235343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
Isoform_21243_8	chr15	-	2909	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	-2	-1	-2	1	multi-exon	TRUE	canonical	0	0	junction_12	66.7675469479281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGGTGTGGCGAGG	NA	False	NA	NA	False	AATAAA	-20	NA	89239864	89235205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
Isoform_21245_5	chr15	-	2600	15	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	79.1957340120936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239866	89235341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558_89239614_89239788
Isoform_21246_10	chr15	-	2511	14	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	83.9641371739205	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89239835	89235344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239788
Isoform_21247_3	chr15	-	3665	9	ISM	ENSMUSG00000022614.9	ENSMUST00000231107.2	3049	10	-483	-4	3	0	intron_retention	FALSE	canonical	3	214	junction_2	18.0190871022924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239833	89235341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
Isoform_21248_5	chr15	-	1230	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-81	-4	-53	4	multi-exon	FALSE	canonical	3	56	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGCTCTGTACCAGC	NA	False	NA	-3	True	ATTAAA	-18	NA	89258102	89255835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89256669_89257625_89257806_89257885
Isoform_21249_33	chr15	-	1336	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2927	-299	2927	299	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTCTGTACCAGCA	NA	False	NA	-2	True	ATTAAA	-19	NA	89258315	89255834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
Isoform_2125_3	chr10	-	3431	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-175	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	358.057278099468	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462412	121425530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_21253_18	chr15	-	2918	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-23	0	-23	0	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCCATGGGACTAC	5193	False	NA	NA	False	AATAAA	-19	NA	89310089	89300607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_21254_156	chr15	-	2714	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-35	216	-35	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5181	False	NA	NA	False	AATAAA	-22	NA	89310101	89300823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_21255_5	chr15	-	2854	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-175	216	-175	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5041	False	NA	NA	False	AATAAA	-22	NA	89310241	89300823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
Isoform_21256_6	chr15	-	1375	10	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	5	1	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1654	False	NA	NA	False	AATAAA	-24	NA	89313628	89310568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_21257_3	chr15	-	1869	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-23	-11	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATAAACTTAAACAAATA	1148	False	NA	NA	False	AATAAA	-12	NA	89314134	89310580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_21258_14	chr15	-	1728	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	-19	-2	-10	2	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATACAGACTTAAGTGA	1161	False	NA	NA	False	AATAAA	-25	NA	89314121	89310567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
Isoform_2126_3	chr10	-	6060	26	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-176	-1	combination_of_known_junctions	FALSE	canonical	3	151	junction_17	270.192008764138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGAGTGGGCCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	121462413	121423285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_21260_33	chr15	-	1233	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	475	-1	6	1	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1655	False	NA	NA	False	AATAAA	-24	NA	89313627	89310568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
Isoform_21261_3	chr15	-	1577	9	FSM	ENSMUSG00000022617.16	ENSMUST00000170334.8	2063	9	481	5	51	2	multi-exon	FALSE	canonical	3	290	junction_3	35.8355619462009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATACAGACTTAAGTGA	1700	False	NA	NA	False	AATAAA	-25	NA	89313582	89310567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251
Isoform_21263_12	chr15	-	1896	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	-479	-1	-10	1	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1161	False	NA	NA	False	AATAAA	-24	NA	89314121	89310568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_21264_14	chr15	-	1406	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	11	-1	2	1	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACAGACTTAAGTG	1651	False	NA	NA	False	AATAAA	-24	NA	89313631	89310568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
Isoform_21265_49	chr15	-	2680	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1257	49	-55	3	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	89360371	89356727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
Isoform_21266_5	chr15	-	2563	7	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	-41	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.2745623366089	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	89360357	89356727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89357761_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
Isoform_21268_6	chr15	-	2798	7	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	-63	2	intron_retention	FALSE	canonical	3	62	junction_4	10.6301458127346	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360379	89356728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
Isoform_21269_23	chr15	-	1609	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	29	2	-4	-2	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAAGGGTCTCAGTTA	18	True	NA	-6	True	AATAAA	-15	NA	89476097	89466737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
Isoform_2127_3	chr10	-	3596	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-2	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_17	303.884172671102	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	9372	False	NA	NA	False	AATAAA	-19	NA	121464716	121425525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
Isoform_21270_3	chr15	-	1486	7	NIC	ENSMUSG00000022621.17	novel	1640	9	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	15.3514385862259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAAGGGTCTCAGTTA	1360	False	NA	-6	True	AATAAA	-15	NA	89476084	89466737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89474475_89474630_89476022
Isoform_21271_3	chr15	-	1792	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	19	2616	1	-15	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGGTGACAATCATG	NA	False	NA	NA	False	NA	NA	NA	93173041	93142350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
Isoform_21272_5	chr15	-	1239	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-132	569	-5	-566	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTTTTGACATGT	NA	False	NA	-3	True	AATAAA	-19	NA	93234821	93182727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_21273_3	chr15	-	1805	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-133	4	-6	-1	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTGCATTTTGTTT	NA	False	NA	-5	True	AATAAA	-16	NA	93234822	93182162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
Isoform_21274_7	chr15	-	932	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296218	93283992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
Isoform_21275_82	chr15	-	871	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	0	6	0	1	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296215	93283992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
Isoform_21277_6	chr15	-	726	7	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	235.838515844116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTTGTGGAATAGTG	NA	False	NA	-13	True	AATAAA	-15	NA	93296182	93283992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93293467_93293497_93295050_93295137_93296043
Isoform_21280_3	chr15	-	2042	7	ISM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	6652	10	6591	-10	3prime_fragment	FALSE	canonical	3	43	junction_6	2.26691175145591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTACTATCGAATTGTC	NA	False	NA	-13	True	AATAAA	-17	NA	94434776	94420578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394
Isoform_21282_55	chr15	-	2790	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	47	3	-7	-3	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGAATTGTCTCTATGT	NA	False	NA	-6	True	AATAAA	-24	NA	94441381	94420571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
Isoform_21286_6	chr15	-	3079	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	-51	-3	-41	3	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487811	94475828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_21289_93	chr15	-	2964	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	62	-1	62	1	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGTATGTTGGCTTT	NA	False	NA	-11	True	AATAAA	-13	NA	94487698	94475830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_21291_8	chr15	-	1371	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	-4	1658	-4	57	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTTGGTTTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	94487764	94477489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_21296_6	chr15	-	2884	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487697	94475831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
Isoform_21297_3	chr15	-	2845	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	35	-67	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAATTACATGTCTTC	NA	False	NA	-79	True	AATAAA	-12	NA	94487725	94475898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
Isoform_21298_3	chr15	-	1212	8	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	16	2750	16	319	5prime_fragment	FALSE	canonical	3	499	junction_7	22.0565136845869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGATTATCACTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	94487744	94478581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
Isoform_2130_7	chr10	-	3537	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-161	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462398	121425530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_21300_10	chr15	-	3433	21	NNC	ENSMUSG00000022454.18	novel	3220	21	NA	NA	-58535	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	3.2542280190546	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCGCGTCTTCCCGAGC	NA	False	NA	8	True	AATAAA	-30	NA	95484975	95117322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95484686
Isoform_21302_9	chr15	-	4909	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-18	-7	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	76.3346552480375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGGGTGTAATGGGA	NA	False	NA	-10	True	AATAAA	-15	NA	96358742	96312459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_21303_5	chr15	-	4958	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-70	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACCAAGGGTGTAATG	NA	False	NA	-13	True	AATAAA	-12	NA	96358794	96312462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_21304_5	chr15	-	4840	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	1	925	1	-9	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCAAGGGTGTAATGG	NA	False	NA	-12	True	AATAAA	-13	NA	96358723	96312461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
Isoform_2132_17	chr10	-	3445	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462306	121425530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_2133_6	chr10	-	5709	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-91	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	299.828675037929	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	-12	True	AATAAA	-12	NA	121462328	121423288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_21331_10	chr15	-	2750	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	426	7	426	-7	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGAACAATGGTTTGT	NA	False	NA	-10	True	ATTAAA	-17	NA	96539417	96473874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
Isoform_21335_8	chr15	-	2564	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-166	4568	-17	1	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGGTTTGTTTCCCTCT	NA	False	NA	-2	True	ATTAAA	-25	NA	96540297	96473866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
Isoform_21338_16	chr15	-	2518	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-117	4565	32	4	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTGTTTCCCTCTTGG	NA	False	NA	1	True	ATTAAA	-28	NA	96540248	96473863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
Isoform_2134_3	chr10	-	3678	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	64	2263	48	-24	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTTACATAGTGAAAT	NA	False	NA	NA	False	TATAAA	-4	NA	121462173	121425547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
Isoform_21345_25	chr15	-	2684	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	4	4578	4	-9	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAGGAACAATGGTTT	NA	False	NA	-12	True	ATTAAA	-15	NA	96540790	96473876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
Isoform_2135_5	chr10	-	3370	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2517	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	331.359444708042	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	9334	False	NA	NA	False	AATAAA	-18	NA	121464754	121425526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_121425743_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
Isoform_21353_80	chr15	-	4643	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	23	-6	23	6	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGATTTTTTGTTTCCTT	NA	False	NA	-2	True	AATAAA	-22	NA	96597588	96585266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
Isoform_21359_7	chr15	-	4522	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	NA	False	NA	-9	True	AATAAA	-15	NA	96597590	96585273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
Isoform_21360_12	chr15	-	914	3	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	-8190	intron_retention	FALSE	canonical	3	252	junction_2	29.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-18	NA	96597590	96595735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_96596145_96596495_96596699_96597288
Isoform_21363_382	chr15	-	1982	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	9	1941	9	1	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTGCAGTGCAGTGTGT	NA	False	NA	-8	True	ATTAAA	-27	NA	96953828	96894644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
Isoform_21364_544	chr15	-	3873	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	55	4	55	-4	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGTGGCTATGATCTT	NA	False	NA	-16	True	AATAAA	-12	NA	96953782	96892707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
Isoform_21365_253	chr15	-	3928	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	4	0	-4	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGTGGCTATGATCTT	NA	False	NA	-16	True	AATAAA	-12	NA	96953837	96892707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
Isoform_21379_73	chr15	-	767	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	1	-258	0	2	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATCATACCATAGCCA	NA	False	NA	-8	True	AATAAA	-19	NA	97065123	97058811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
Isoform_2138_15	chr10	-	1277	5	ISM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-506	89360	-506	25486	5prime_fragment	FALSE	canonical	3	43	junction_1	1.6583123951777	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTGAAAAAATGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	121883726	121706255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
Isoform_21381_18	chr15	-	906	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-1	-395	0	139	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065125	97058674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
Isoform_21382_157	chr15	-	784	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATCATACCATAGCCATT	NA	False	NA	-6	True	AATAAA	-21	NA	97065122	97058809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
Isoform_21386_31	chr15	-	930	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-8	139	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065133	97058674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
Isoform_2139_31	chr10	-	1446	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	201	3146	-14	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933075	121917164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_21390_8	chr15	-	772	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	2	137	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065121	97058676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_97059277_97064383_97064492_97065057
Isoform_21391_9	chr15	-	667	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-20	8	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCATAGCCATTTTAA	NA	False	NA	-2	True	AATAAA	-25	NA	97065145	97058805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_97059277_97064383_97064492_97065057
Isoform_21392_21	chr15	-	801	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-7	-139	-7	139	multi-exon	FALSE	canonical	3	219	junction_1	244.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065132	97058674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97059277_97064383_97064508_97065057
Isoform_21393_39	chr15	-	658	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-1	-2	-1	2	multi-exon	FALSE	canonical	3	219	junction_1	244.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGATCATACCATAGCCA	NA	False	NA	-8	True	AATAAA	-19	NA	97065126	97058811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97059277_97064383_97064508_97065057
Isoform_21396_160	chr15	-	2251	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	19	1	19	-1	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGTCGATATTTCATT	NA	False	NA	-4	True	AATAAA	-24	NA	97603687	97572978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
Isoform_21399_16	chr15	-	3682	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	134	189	-46	-3	multi-exon	TRUE	canonical	3	28	junction_8	8.12572672702261	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACGTGTGTGTTCTAC	313	False	NA	-24	True	CATAAA	-7	NA	97665593	97642839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_2140_54	chr10	-	1372	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	274	3147	29	-1	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTATTCATAAGTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	121933002	121917165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
Isoform_21400_5	chr15	-	3856	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-40	189	-40	-3	multi-exon	FALSE	canonical	3	28	junction_8	8.12572672702261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACGTGTGTGTTCTAC	139	False	NA	-24	True	CATAAA	-7	NA	97665767	97642839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
Isoform_21401_4	chr15	-	2238	12	ISM	ENSMUSG00000022475.20	ENSMUST00000121514.8	3767	23	12207	38	4977	-1	3prime_fragment	FALSE	canonical	2	9	junction_9	5.47420698811804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAAGTGAAA	5277	False	NA	-62	True	NA	NA	NA	97700537	97690606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310
Isoform_21402_6	chr15	-	4001	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-8	1	combination_of_known_junctions	TRUE	canonical	2	7	junction_20	5.27029806241228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGTGAAAAA	2280	False	NA	-60	True	NA	NA	NA	97729358	97690604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
Isoform_21403_12	chr15	-	3944	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	276	3	3	-3	multi-exon	TRUE	canonical	2	7	junction_19	5.55841976156414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTTTATTTGCTTT	2266	False	NA	-20	True	NA	NA	NA	97729372	97690564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
Isoform_21404_3	chr15	-	1018	3	ISM	ENSMUSG00000022483.18	ENSMUST00000088355.12	4862	53	27273	13	11537	-13	3prime_fragment	FALSE	canonical	3	15	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGGAAAGGATATGGTG	9670	False	NA	NA	False	ATTAAA	-18	NA	97875265	97873495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_97874068_97874522_97874766_97875062
Isoform_21415_7	chr15	-	3883	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	206	2486	31	2	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6174	False	NA	-2	True	AATAAA	-15	NA	97991419	97939110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_21417_8	chr15	-	3721	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	369	2485	-5	3	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	6337	False	NA	-1	True	AATAAA	-16	NA	97991256	97939109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
Isoform_2142_6	chr10	-	1521	6	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933017	121917164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
Isoform_21429_46	chr15	-	2165	4	FSM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	-47	-1069	0	-8	multi-exon	FALSE	canonical	3	32	junction_3	39.6848697728604	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAATTTGGCCACTTC	NA	False	NA	-8	True	AATAAA	-13	NA	98043587	98032525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98034320_98039164_98039270_98040531_98040692_98043481
Isoform_21430_97	chr15	-	2107	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	62	-1069	15	-8	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAATTTGGCCACTTC	NA	False	NA	-8	True	AATAAA	-13	NA	98043525	98032525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
Isoform_21431_81	chr15	-	2169	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	0	-1069	0	-8	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAATTTGGCCACTTC	NA	False	NA	-8	True	AATAAA	-13	NA	98043587	98032525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
Isoform_21434_46	chr15	-	2440	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	332.434380418077	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432145	98416692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426907_98427168_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_21442_1425	chr15	-	2420	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	22	1154	2	-4	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432123	98416692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_21443_352	chr15	-	2446	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	-12	1162	-12	0	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432157	98416700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_21448_133	chr15	-	2127	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-29	3	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432174	98416697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
Isoform_21452_96	chr15	-	2307	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432123	98416690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
Isoform_21453_78	chr15	-	2322	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432145	98416697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
Isoform_2146_6	chr10	-	6048	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-349	-188	9	-2	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGCATTTATTTA	NA	False	NA	-99	True	AATAAA	-17	NA	122912279	122831065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_21461_595	chr15	-	2320	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	0	4	0	-4	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432125	98416692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_21464_45	chr15	-	2025	10	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-29	3	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	387.907205398405	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432174	98416697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
Isoform_21466_41	chr15	-	2207	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	395.612954003026	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432125	98416690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
Isoform_21468_88	chr15	-	2571	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	398.463749919613	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432145	98416690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_2147_3	chr10	-	6141	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	-275	3	85	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTCTACTTCTGATT	NA	False	NA	-12	True	AATACA	-12	NA	122912285	122830978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_21472_86	chr15	-	2440	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	399.718463421444	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432123	98416697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
Isoform_21479_220	chr15	-	2262	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-87	0	-43	0	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98441091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_2148_27	chr10	-	3351	24	ISM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	21182	3	1544	5prime_fragment	FALSE	canonical	3	100	junction_12	19.7302220848136	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGGGAAACGATTGAAA	NA	False	NA	NA	False	AATATA	-18	NA	122912285	122852435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
Isoform_21480_25	chr15	-	2358	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-87	-96	-43	96	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACATCCCTTATGAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98440995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_21482_7	chr15	-	2095	8	FSM	ENSMUSG00000011960.13	ENSMUST00000168928.8	2011	8	-87	3	-43	-3	multi-exon	FALSE	canonical	3	5	junction_2	14.8681278071516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465604	98441094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98442490_98444404_98444476_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_21483_56	chr15	-	3205	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	-15	-3	-10	3	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	6984	False	NA	-11	True	AATAAA	-18	NA	98560785	98543011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
Isoform_21486_4	chr15	-	3102	11	FSM	ENSMUSG00000003360.16	ENSMUST00000160506.8	3093	11	-20	11	-10	1	multi-exon	FALSE	canonical	3	15	junction_1	5.71751694356912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCGGGCGT	6984	False	NA	NA	False	NA	NA	NA	98560785	98545882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
Isoform_21490_5	chr15	-	2760	2	FSM	ENSMUSG00000003360.16	ENSMUST00000159170.2	610	2	-15	-2135	-10	921	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATTGAAAAAAAAAA	6984	False	NA	NA	False	NA	NA	NA	98560785	98553638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98556317_98560703
Isoform_21491_26	chr15	-	1628	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	3	572	0	-572	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGGGGTTTTGTTGT	NA	False	NA	NA	False	AATATA	-12	NA	98575339	98567657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
Isoform_21492_10	chr15	-	718	4	ISM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	609	-1	551	1	3prime_fragment	FALSE	canonical	3	637	junction_3	34.4512538072113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGTATTTTTCACTC	NA	False	NA	NA	False	AATAAA	-16	NA	98625470	98622249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091
Isoform_21493_184	chr15	-	699	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	36	-1	-10	1	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGTATTTTTCACTC	NA	False	NA	NA	False	AATAAA	-16	NA	98626043	98622249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
Isoform_21494_181	chr15	-	3480	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	54	-992	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1853	False	NA	-11	True	ATTAAA	-14	NA	98661038	98635506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98636409_98636448_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
Isoform_21495_10	chr15	-	4763	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	4	237	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTGCTTTGTTGTT	1803	False	NA	-3	True	AATAAA	-20	NA	98661088	98634277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98636407_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
Isoform_21497_18	chr15	-	2038	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	88	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCAGTGTTTGATTTCT	9504	False	NA	-6	True	ATTAAA	-20	NA	98729247	98710679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
Isoform_21498_127	chr15	-	1635	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	17	0	-16	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9366	False	NA	-4	True	ATTAAA	-22	NA	98729385	98710677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
Isoform_2150_7	chr10	-	3255	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	45	8225	3	-3	multi-exon	TRUE	canonical	3	236	junction_15	99.6636747895759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATGTTTTCTTTAATT	NA	False	NA	-1	True	AATAAA	-29	NA	123032855	122949135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_21500_31	chr15	-	1155	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	106	0	-40	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779255	98775658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
Isoform_21504_3	chr15	-	1195	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	66	0	66	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779295	98775658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
Isoform_21505_89	chr15	-	2169	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	133	2	-43	-2	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTGTCCCTGTGTCT	NA	False	NA	-5	True	AATAAA	-33	NA	98815979	98801799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_21507_15	chr15	-	2298	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	4	2	4	-2	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTGTCCCTGTGTCT	NA	False	NA	-5	True	AATAAA	-33	NA	98816108	98801799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_21508_8	chr15	-	2133	13	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	133	2746	-43	-445	5prime_fragment	FALSE	canonical	3	43	junction_5	11.8872013340212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	98815979	98804543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
Isoform_2151_9	chr10	-	3168	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	0	1498	0	-6	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAATTATGTTTTCTTTA	NA	False	NA	-4	True	AATAAA	-26	NA	123032858	122949138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_21516_12453	chr15	-	1609	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	127	7	0	-7	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	12453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTGTTTCTGGAT	158	False	NA	NA	False	AGTAAA	-11	NA	98832319	98829312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
Isoform_21517_461	chr15	-	1654	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	82	7	-45	-7	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTGTTTCTGGAT	113	False	NA	NA	False	AGTAAA	-11	NA	98832364	98829312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
Isoform_21526_2658	chr15	-	1646	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	154	3	154	-3	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	2658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGTGTTCTAT	NA	False	NA	-7	True	AATAAA	-16	NA	98851430	98847720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
Isoform_21531_13	chr15	-	2082	2	FSM	ENSMUSG00000001076.8	ENSMUST00000064462.5	1474	2	-610	2	-610	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGCCTACCTT	6299	False	NA	NA	False	AATAAA	-15	NA	98986308	98981968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98982815_98985072
Isoform_21534_32	chr15	-	2010	15	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	227.949611779016	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149801	99140702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149602
Isoform_21535_1030	chr15	-	1907	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	4	5	-2	4	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149838	99140702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
Isoform_21538_12	chr15	-	2016	17	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-2	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	334.728755627224	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149800	99140702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99148627_99148671_99148706_99148811_99149742
Isoform_21539_92	chr15	-	1770	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	5	-4	5	4	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTCTTTTATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	99149821	99140702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
Isoform_21541_6	chr15	-	4444	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	-20	-1	-20	1	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGCACCAAGCTGTC	NA	False	NA	-16	True	CATAAA	-18	NA	99268383	99215104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
Isoform_21542_13	chr15	-	4306	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	118	-1	85	1	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGCACCAAGCTGTC	NA	False	NA	-16	True	CATAAA	-18	NA	99268245	99215104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
Isoform_21543_5	chr15	-	4891	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	-37	-1	-37	1	multi-exon	TRUE	canonical	3	12	junction_6	8.3877390676312	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355666	99319914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
Isoform_21544_87	chr15	-	1228	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	28	20	6	-18	multi-exon	FALSE	canonical	3	84	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAACGAAAAA	NA	False	NA	-20	True	NA	NA	NA	99372583	99367979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99368961_99372336
Isoform_2155_14	chr10	-	531	4	ISM	ENSMUSG00000020124.11	ENSMUST00000219010.2	2840	6	-45	9653	-5	-7485	5prime_fragment	FALSE	canonical	3	512	junction_3	45.8112067802919	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGAGGCTCCCGTCCC	NA	False	NA	NA	False	NA	NA	NA	123032876	123007004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_123007132_123011747_123011879_123017577_123017706_123032731
Isoform_21552_13	chr15	-	2867	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	170.527387371501	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAAGTGATGTTGGTT	NA	False	NA	-8	True	AATAAA	-12	NA	99549492	99518384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99549387
Isoform_21558_36	chr15	-	2878	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	57	junction_16	157.969921484281	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAAGTGATGTTGGTT	NA	False	NA	-8	True	AATAAA	-12	NA	99549493	99518384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99549387
Isoform_2156_74	chr10	-	1035	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	9	-1	9	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737208	126723116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_21560_100	chr15	-	3028	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	22	2	-9	-1	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549502	99518378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
Isoform_21562_11	chr15	-	3001	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549504	99518378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
Isoform_21566_352	chr15	-	2899	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	33	1	-11	-1	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATGTTGGTTTTCTTG	NA	False	NA	-2	True	AATAAA	-18	NA	99549504	99518378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
Isoform_21569_4	chr15	-	2039	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	25	711	25	0	multi-exon	FALSE	canonical	2	12	junction_1	103.150569557322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_2157_5	chr10	-	958	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-29	114	-22	-114	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGGACACGGCAGAA	NA	False	NA	-114	True	CATAAA	-35	NA	126737246	126723231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_21570_25	chr15	-	1841	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	25	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21571_5	chr15	-	1902	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-32	1	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99670378	99633471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21572_17	chr15	-	2070	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	26	0	26	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670456	99633472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21573_125	chr15	-	1932	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	164	0	25	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21574_4	chr15	-	2702	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	102	-708	-34	-3	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGCCTTAGTTAATGG	NA	False	NA	NA	False	NA	NA	NA	99670380	99632764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21575_36	chr15	-	1998	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	96	2	-40	-2	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	NA	False	NA	-5	True	ATTAAA	-13	NA	99670386	99633474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_21577_4	chr15	-	1797	9	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	31	0	intron_retention	FALSE	canonical	2	6	junction_3	90.2022034098946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670312	99633472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
Isoform_2158_3	chr10	-	2110	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-44	-1023	-37	1023	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTGACAAAGCATCCT	NA	False	NA	NA	False	NA	NA	NA	126737261	126722094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
Isoform_21593_253	chr15	-	4194	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	49	0	9	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7287	False	NA	-3	True	AATAAA	-15	NA	99773288	99676350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
Isoform_21605_15	chr15	-	2141	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	22	862	22	-862	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTTTCAGGTGAGTTA	NA	False	NA	-6	True	TATAAA	-19	NA	100320914	100286640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_21607_10	chr15	-	4347	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-27	95	26	-95	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320910	100290538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
Isoform_21608_103	chr15	-	4116	6	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	227	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.8621787609308	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGTGGGTTCTTTAT	NA	False	NA	-1	True	ATTAAA	-14	NA	100393142	100377453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_100378475_100378503_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
Isoform_21609_7	chr15	-	3518	15	ISM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	162	50	-57	-1	3prime_fragment	FALSE	canonical	3	68	junction_1	18.1805008799235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449727	100400677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
Isoform_21611_19	chr15	-	3214	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	39	49	12	0	multi-exon	TRUE	canonical	3	68	junction_1	18.9415475139235	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449850	100400676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_21612_3	chr15	-	2868	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	8	426	8	-377	multi-exon	FALSE	canonical	3	68	junction_1	18.9415475139235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTTTATGTTCTGC	NA	False	NA	NA	False	ATTAAA	-35	NA	100449881	100401053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_21613_43	chr15	-	3657	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	0	-3	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8506	False	NA	0	True	AATAAA	-21	NA	100478112	100473198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100476500_100477756
Isoform_21614_33	chr15	-	3686	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	-29	-3	-29	0	multi-exon	FALSE	canonical	3	66	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8477	False	NA	0	True	AATAAA	-21	NA	100478141	100473198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100476500_100477756
Isoform_21616_5	chr15	-	959	4	FSM	ENSMUSG00000053559.14	ENSMUST00000230280.2	880	4	-78	-1	-78	1	multi-exon	FALSE	canonical	3	57	junction_1	291.611994875992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCATTTTCAAGAACTA	NA	False	NA	-6	True	ATTAAA	-15	NA	100534650	100519241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534439
Isoform_21617_5	chr15	-	879	4	FSM	ENSMUSG00000053559.14	ENSMUST00000229965.2	586	4	-2	-291	-2	-9	multi-exon	FALSE	canonical	3	57	junction_1	287.836759292485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAAATTTTTCCTTGT	NA	False	NA	7	True	ATTAAA	-28	NA	100534747	100519228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534629
Isoform_21618_96	chr15	-	1043	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	86	6	-78	-6	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAATTTTTCCTTGTTCT	NA	False	NA	10	True	ATTAAA	-31	NA	100534650	100519225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
Isoform_2162_1144	chr10	-	1158	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	37	11	0	-11	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATAGTGCTTAATGTG	NA	False	NA	-14	True	AATAAA	-13	NA	126866672	126858211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
Isoform_21620_40	chr15	-	1135	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	-21	21	-12	2	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATTTTCAAGAACTAA	NA	False	NA	-5	True	ATTAAA	-16	NA	100534757	100519240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
Isoform_21621_38	chr15	-	1337	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-336	-81	-336	-6	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGATTTTCATTTTCA	NA	False	NA	-13	True	ATTAAA	-8	NA	100535157	100519248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_21622_101	chr15	-	979	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	47	-106	-29	-4	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCCTTGTTCTGC	NA	False	NA	12	True	ATTAAA	-33	NA	100534774	100519223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_21624_8	chr15	-	1398	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-373	-105	-373	-5	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTTTCCTTGTTCTG	NA	False	NA	11	True	ATTAAA	-32	NA	100535194	100519224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
Isoform_21628_59	chr15	-	1990	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.499419626636	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGGTGTCTTGCCCTGA	NA	False	NA	-6	True	AATAAA	-16	NA	100567434	100538964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_100539184_100539222_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
Isoform_21629_5	chr15	-	1083	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2557	4	0	0	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGCTTGCATTTA	8442	False	NA	-2	True	AATAAA	-16	NA	100583245	100572305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
Isoform_2163_154	chr10	-	1200	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	5	1	5	-1	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAATGTGTGAGTGTGTG	NA	False	NA	-4	True	AATAAA	-23	NA	126866704	126858201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
Isoform_21630_3	chr15	-	772	4	FSM	ENSMUSG00000023031.9	ENSMUST00000229235.2	456	4	-116	-200	-116	1	multi-exon	FALSE	canonical	3	11	junction_3	10.8730042868667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGCTTGCATTTAT	5838	False	NA	-1	True	AATAAA	-17	NA	100581116	100572304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580934
Isoform_21631_23	chr15	-	3754	11	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	215	-1052	215	1	3prime_fragment	FALSE	canonical	3	77	junction_7	8.59127464349732	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTGGATTTGAGTTC	1889	False	NA	-6	True	AATAAA	-20	NA	100618143	100589692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895
Isoform_21632_10	chr15	-	3813	11	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	153	-1049	153	0	3prime_fragment	FALSE	canonical	3	77	junction_7	8.59127464349732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATGTTGGATTTGAG	1827	False	NA	-9	True	AATAAA	-17	NA	100618205	100589695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895
Isoform_21633_74	chr15	-	3846	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-48	-1052	-48	1	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTGGATTTGAGTTC	1626	False	NA	-6	True	AATAAA	-20	NA	100618406	100589692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
Isoform_21634_4	chr15	-	1967	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	-19	10	-19	-10	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGCTATGTATGCAT	5873	False	NA	-4	True	AATAAA	-22	NA	101912936	101905142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
Isoform_21636_54	chr15	-	1782	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	168	8	168	-8	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTATGTATGCATTC	6060	False	NA	-2	True	AATAAA	-24	NA	101912749	101905140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
Isoform_21637_286	chr15	-	2431	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	27	-2	-15	2	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAAGGGGAATCCTTCC	NA	False	NA	-3	True	AATAAA	-28	NA	102044642	102024960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
Isoform_21638_25	chr15	-	2642	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	-3	-183	-3	183	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGACCCCACTCTGG	NA	False	NA	NA	False	AATAGA	-18	NA	102044672	102024779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
Isoform_21642_6	chr15	-	2632	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTATGTTTTAAAGCT	6638	False	NA	NA	False	AATAAA	-19	NA	102112322	102085431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
Isoform_21643_15	chr15	-	2296	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6653	False	NA	NA	False	NA	NA	NA	102112307	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
Isoform_21644_7	chr15	-	2247	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	36.7303839792948	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6259	False	NA	NA	False	NA	NA	NA	102112701	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112573
Isoform_21645_4	chr15	-	2162	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	29.4138289471693	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	7088	False	NA	NA	False	NA	NA	NA	102111872	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571
Isoform_21646_15	chr15	-	2179	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	39.7570257155889	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6639	False	NA	NA	False	NA	NA	NA	102112321	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112130
Isoform_21647_3	chr15	-	2485	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	39.7570257155889	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6648	False	NA	NA	False	AATAAA	-13	NA	102112312	102085437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112130
Isoform_21648_45	chr15	-	2039	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6655	False	NA	NA	False	NA	NA	NA	102112305	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
Isoform_21649_20	chr15	-	2370	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6639	False	NA	NA	False	AATAAA	-13	NA	102112321	102085437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
Isoform_21651_12	chr15	-	2012	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-30	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6239	False	NA	NA	False	NA	NA	NA	102112721	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
Isoform_21652_5	chr15	-	2291	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6275	False	NA	NA	False	AATAAA	-13	NA	102112685	102085437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
Isoform_21653_3	chr15	-	2231	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	44.0159328397116	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	6639	False	NA	NA	False	NA	NA	NA	102112321	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102110878_102111010_102111571_102111696_102112130
Isoform_21654_3	chr15	-	2100	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	42.8278206569307	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	6639	False	NA	NA	False	NA	NA	NA	102112321	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102111571_102111696_102112130
Isoform_21655_3	chr15	-	2290	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6643	False	NA	NA	False	AATAAA	-13	NA	102112317	102085437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
Isoform_21656_7	chr15	-	1990	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	6628	False	NA	NA	False	NA	NA	NA	102112332	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
Isoform_21657_4	chr15	-	1910	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	33.5556193779333	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	6262	False	NA	NA	False	NA	NA	NA	102112698	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112573
Isoform_21658_3	chr15	-	1793	3	NIC	ENSMUSG00000023044.3	novel	593	5	NA	NA	263	1	intron_retention	FALSE	canonical	3	123	junction_1	10	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102088033	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102087268_102087395_102087596_102087955
Isoform_21659_7	chr15	-	1921	2	NIC	ENSMUSG00000023044.3	novel	593	5	NA	NA	263	1	intron_retention	FALSE	canonical	3	143	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102088033	102085752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102087596_102087955
Isoform_21660_3	chr15	-	3091	13	NIC	ENSMUSG00000023044.3	novel	1786	14	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_12	36.9511689786519	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	6632	False	NA	NA	False	NA	NA	NA	102112328	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
Isoform_21661_4	chr15	-	2168	3	NIC	ENSMUSG00000023044.3	novel	772	9	NA	NA	-355	-2	intron_retention	FALSE	canonical	3	13	junction_2	65	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102088651	102085755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102087596_102087955_102088038_102088405
Isoform_21662_5	chr15	-	2268	12	ISM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	7385	2	7349	1	intron_retention	FALSE	canonical	3	39	junction_10	5.51781487472492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGAGCCTCTACTTTA	3233	False	NA	-3	True	AATAAA	-12	NA	102132994	102124431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736
Isoform_21665_77	chr15	-	2643	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	38	2	2	1	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGAGCCTCTACTTTA	NA	False	NA	-3	True	AATAAA	-12	NA	102140341	102124431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
Isoform_21666_7	chr15	-	2440	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	12.7794213275663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGCCTCTACTTTAC	NA	False	NA	-2	True	AATAAA	-13	NA	102140341	102124430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102140285
Isoform_21667_7	chr15	-	2484	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	12.5302002042969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	102140341	102124429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102124703_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
Isoform_21668_4	chr15	-	2386	8	NIC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	269	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	24.6344706226284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102151755	102143373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102151647
Isoform_21669_56	chr15	-	2678	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	41	-1	41	-1	multi-exon	FALSE	canonical	3	57	junction_4	9.19183310979738	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102154894	102143373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
Isoform_2167_28	chr10	-	1390	7	Fusion	ENSMUSG00000080115.4_ENSMUSG00000040521.12	novel	1206	6	NA	NA	-362	0	multi-exon	FALSE	canonical	3	15	junction_6	461.08811522311	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	False	NA	-3	True	AATAAA	-24	NA	126877744	126858200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877575
Isoform_21673_4	chr15	-	2937	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	15	1	15	-1	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGGTGTGGATCCCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	102165937	102143373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
Isoform_21675_18	chr15	-	2136	15	ISM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	86	4	14	0	intron_retention	FALSE	canonical	3	447	junction_7	34.6472014949053	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259108	102246690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
Isoform_21676_46	chr15	-	1811	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	-4	4	-4	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259198	102246690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
Isoform_21677_412	chr15	-	1718	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	86	7	14	-2	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259108	102246693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
Isoform_21678_5	chr15	-	1523	13	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	14	-2	intron_retention	FALSE	canonical	1	2	junction_11	144.31300376458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259108	102246693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102258387_102258516_102258930
Isoform_21680_7	chr15	-	3752	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	15	-419	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419120	102407878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
Isoform_21682_3	chr15	-	3772	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-417	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	21.6347521363199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGAGGGTTTTCTTGGTG	NA	False	NA	1	True	AATATA	-22	NA	102419119	102407876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
Isoform_21683_21	chr15	-	3603	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	28	-419	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419107	102407878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
Isoform_21686_7	chr15	-	3613	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	37	668	37	-419	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419098	102407878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
Isoform_21687_3	chr15	-	3076	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	1	1241	1	-992	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAGATAGATGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	102419134	102408451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
Isoform_21688_8	chr15	-	3439	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-419	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	20.1934431915163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGAGGGTTTTCTTGG	NA	False	NA	-1	True	AATATA	-20	NA	102419119	102407878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
Isoform_21691_9	chr15	-	2163	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	356	4	5	-4	multi-exon	TRUE	canonical	3	29	junction_11	8.85605736578731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102533518	102442010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
Isoform_21692_7	chr15	-	2235	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	-28	4940	-14	-4	multi-exon	FALSE	canonical	3	22	junction_11	10.1696355688543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102533913	102442010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
Isoform_21694_10	chr7	-	408	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	241	-4	183	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAAGGCTGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	23646474	23646066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23646100_23646500
Isoform_21696_809	chr15	-	651	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	80	0	80	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	-11	True	AATAAA	-17	NA	102579482	102571298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
Isoform_21701_94	chr15	-	2740	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	83	1	36	-1	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCATGACGTATGT	NA	False	NA	-7	True	AATATA	-18	NA	102630530	102615212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
Isoform_21703_5	chr15	-	2939	14	FSM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	37	-8	37	8	multi-exon	FALSE	canonical	3	88	junction_13	14.4115338424578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTTTCCTCAT	NA	False	NA	NA	False	AATAAA	-25	NA	102630529	102616011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
Isoform_21705_60	chr15	-	3320	4	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3782	4	8	-4	3prime_fragment	TRUE	canonical	3	65	junction_3	17.3781471969828	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071737	103061720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698
Isoform_21706_23	chr15	-	3239	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	18	-2766	18	-4	multi-exon	FALSE	canonical	3	15	junction_2	46	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071727	103061720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103064629_103066043_103066346_103071698
Isoform_21707_10	chr15	-	3351	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	37.6061460697879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071737	103061720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_103064629_103066043_103066346_103066552_103066655_103071698
Isoform_21708_3	chr15	-	992	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-12	-212	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTAAGTGTAGCTCTG	NA	False	NA	-13	True	AATATA	-12	NA	103148255	103107893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
Isoform_21709_6	chr15	-	4042	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-12	4773	-12	370	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103148255	103104743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
Isoform_2171_392	chr10	-	1544	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	3	9	0	-9	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	-9	True	AATAAA	-6	NA	126906130	126903157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
Isoform_21711_28	chr15	-	895	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-12	7920	-12	-209	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGTGTAGCTCTGTGA	NA	False	NA	-10	True	AATATA	-15	NA	103148255	103107890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
Isoform_21714_51	chr15	-	2247	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-13	-13	-13	0	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8803	False	NA	-12	True	AATAAA	-24	NA	103231950	103222321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
Isoform_21715_6	chr15	-	2323	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	-27	2	-27	-2	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCAAGGACTCAGACTGT	6892	False	NA	-14	True	AATAAA	-22	NA	103248547	103222323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
Isoform_21716_14	chr15	-	4211	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	169	2	154	-2	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCAGTCTGTCCTTCC	NA	False	NA	0	True	AATAAA	-26	NA	103275021	103252714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
Isoform_21718_4	chr15	-	869	9	FSM	ENSMUSG00000022487.15	ENSMUST00000153930.8	799	9	-50	-20	10	-2	multi-exon	FALSE	canonical	3	33	junction_8	29.634228520412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTGGCAAGTACTTTT	8433	False	NA	-4	True	AGTAAA	-14	NA	103338826	103310889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603
Isoform_21719_13	chr15	-	784	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-30	-54	0	1	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8423	False	NA	-1	True	AGTAAA	-17	NA	103338836	103310886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
Isoform_21720_27	chr15	-	703	9	FSM	ENSMUSG00000022487.15	ENSMUST00000023129.15	819	9	61	55	0	1	multi-exon	FALSE	canonical	3	70	junction_8	17.7019596372831	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8423	False	NA	-1	True	AGTAAA	-17	NA	103338836	103310886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
Isoform_21721_5	chr15	-	614	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	42.4446818860521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAAGTACTTTTTTT	8411	False	NA	-1	True	AGTAAA	-17	NA	103338848	103310886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103336766_103336812_103338782
Isoform_21722_62	chr15	-	756	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-11	561	-11	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2041	False	NA	-38	True	GATAAA	-15	NA	103446441	103439266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_21723_4	chr15	-	893	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	10	403	1	12	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGTCGCCTCAAGGTT	2062	False	NA	NA	False	AATAGA	-19	NA	103446420	103439108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_21725_4	chr15	-	1306	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-1	1	-1	-1	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTTTCACCCCCTTTT	2051	False	NA	NA	False	ATTAAA	-20	NA	103446431	103438706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
Isoform_21726_8	chr15	-	935	4	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCTAATCTGGCCTA	NA	False	NA	-1	True	NA	NA	NA	75754364	75741422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
Isoform_21727_4	chr15	-	1163	4	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAAGGGTC	NA	False	NA	NA	False	NA	NA	NA	75754364	75741194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
Isoform_21729_5	chr15	-	2198	3	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCACAAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57840484	57837908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_57839652_57839752_57840113_57840389
Isoform_21730_3	chr15	-	2139	3	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAACCACAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	57841250	57837910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_57839652_57839752_57840113_57841212
Isoform_21731_4	chr15	-	3455	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	14	junction_1	28.0985873709854	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449667	100400677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
Isoform_21732_4	chr15	-	3235	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	27.8291613639761	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGAGTTTTTGGTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	100449881	100400683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
Isoform_21733_11	chr15	-	1871	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-28	238	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	36.3807030657127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097044	82091156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_82091792_82091951_82092099_82092663_82092798_82096089
Isoform_21734_8	chr15	-	1885	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-36	241	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5592345297419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCGATCATCAGTCA	NA	False	NA	-5	True	AATAAA	-25	NA	82097052	82091153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_82091795_82091951_82092099_82092663_82092798_82096089
Isoform_21735_4	chr15	-	2653	3	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	84	-325	intron_retention	FALSE	canonical	3	5	junction_1	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCTTCCTCTTTACT	NA	False	NA	-4	True	AATAAA	-18	NA	60696845	60691167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_60692121_60694623_60695841_60696362
Isoform_21736_9	chr15	-	622	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGAGTTTGTGGGGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	102840052	102837216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_102837498_102839711
Isoform_21738_4	chr15	-	998	5	NNC	ENSMUSG00000005360.15	novel	964	3	NA	NA	15	-14904	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.9953699733862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGAGTGCCTCTTCT	NA	False	NA	NA	False	AATAAA	-32	NA	8739950	8686643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_8686996_8717194_8717297_8717771_8717910_8738045_8738324_8739822
Isoform_21739_5	chr15	-	886	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGAATCTGTATTATT	NA	False	NA	-9	True	NA	NA	NA	102840079	102835266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_102835785_102839711
Isoform_21740_3	chr15	-	632	3	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-2	-2504	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	123.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAAATATTAAATTATT	NA	False	NA	NA	False	NA	NA	NA	12824729	12822493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_12822803_12823646_12823793_12824552
Isoform_21742_3	chr15	-	968	3	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCTTTTTAAGACATG	NA	False	NA	NA	False	ATTAAA	-15	NA	38366307	38357574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_38358314_38358399_38358471_38366149
Isoform_21743_3	chr15	-	1641	6	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	-3	6699	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.7092788593643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTACGTAGGTTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	94441370	94427340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_94427578_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
Isoform_21744_4	chr15	-	1101	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-57	-2484	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTTGAATTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	98465618	98449016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
Isoform_21746_24	chr15	+	2096	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	51	1380	51	1	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	4055915	4183446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21747_82	chr15	+	1850	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	297	1380	-4	1	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	4056161	4183446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21748_28	chr15	+	1900	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	247	1380	-54	1	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	4056111	4183446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21750_8	chr15	+	2047	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	236	1244	-65	120	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTGAATTTTCATGTG	NA	False	NA	15	True	ATTAAA	-15	NA	4056100	4183582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21751_37	chr15	+	3214	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	313	0	12	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4056177	4184826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21752_8	chr15	+	3249	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	276	2	-25	-2	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAATGTGTGTGTCCTCT	NA	False	NA	14	True	AATAAA	-18	NA	4056140	4184824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21753_8	chr15	+	3466	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	59	2	59	-2	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAATGTGTGTGTCCTCT	NA	False	NA	14	True	AATAAA	-18	NA	4055923	4184824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
Isoform_21757_1712	chr15	+	359	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	10	466	10	-1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2258	False	NA	33	True	AATAAA	-14	NA	5146136	5148156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
Isoform_21759_531	chr15	+	390	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-21	466	-21	-1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2227	False	NA	33	True	AATAAA	-14	NA	5146105	5148156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
Isoform_2176_6	chr10	-	2275	3	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	0	-9	intron_retention	FALSE	canonical	3	601	junction_1	32.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTCTTGTCTTGT	NA	False	NA	-9	True	AATAAA	-6	NA	126906130	126903157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_126904252_126904348_126905383_126905983
Isoform_21761_26	chr15	+	583	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	-28	1	-21	-1	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGGTGATCTAA	2276	False	NA	33	True	AATAAA	-14	NA	5146154	5148156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
Isoform_21766_9	chr15	+	4634	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-16	0	14	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173356	5211373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_21767_13	chr15	+	4258	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-8	368	-8	-368	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCTATTTTTTTCT	NA	False	NA	3	True	AATAAA	-15	NA	5173364	5211005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_21768_15	chr15	+	1670	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-6	2954	-6	-2954	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTTATTTCTTTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	5173366	5208419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_21769_3	chr15	+	1576	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-7	-2955	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGCTTATTTCTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	5173365	5208418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
Isoform_2177_125	chr10	-	2630	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-2	-1	-2	1	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCAGGCTCTGTGGGG	NA	False	NA	-3	True	AATAAA	-15	NA	126957002	126931519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
Isoform_21770_14	chr15	+	1652	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	3	16	3	-16	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGGTCAAAAAAGTTT	NA	False	NA	15	True	AGTAAA	-15	NA	5215008	5247801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_21772_4	chr15	+	3650	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	157	-1975	-10	1975	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTTCTGGTTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	5215197	5249792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_21773_10	chr15	+	1649	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	176	7	9	-7	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAAGTTTCTTTCCTTT	NA	False	NA	24	True	AGTAAA	-24	NA	5215216	5247810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_21774_5	chr15	+	1824	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-6	14	-6	-14	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGTCAAAAAAGTTTCT	NA	False	NA	17	True	AGTAAA	-17	NA	5215034	5247803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
Isoform_21776_3	chr15	+	751	7	FSM	ENSMUSG00000050310.10	ENSMUST00000226201.2	2633	7	0	1882	0	-1882	multi-exon	FALSE	canonical	3	76	junction_1	4.31083905212585	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAGAAATTATGTTG	NA	False	NA	NA	False	NA	NA	NA	6737861	6786214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941
Isoform_21779_59	chr15	+	4354	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	59	3419	-4	792	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTGTATATCTA	NA	False	NA	16	True	AATAAA	-19	NA	8138815	8187312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
Isoform_21780_3	chr15	+	6385	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	58	1389	-5	1034	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTGTGTTTCCATTT	NA	False	NA	11	True	AATGAA	-21	NA	8138814	8189342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
Isoform_21784_25	chr15	+	3229	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	180	726	-135	305	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTTTCTTATTTCC	87	False	NA	1	True	AATAAA	-21	NA	9071519	9110253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_21785_19	chr15	+	3401	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	8	726	8	305	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTTTTCTTATTTCC	14	False	NA	1	True	AATAAA	-21	NA	9071347	9110253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_21787_59	chr15	+	3354	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-9	307	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	-3	True	NA	3	True	AATAAA	-23	NA	9071330	9110255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_2179_268	chr10	-	2465	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-8	1	-2	1	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCAGGCTCTGTGGGG	NA	False	NA	-3	True	AATAAA	-15	NA	126957002	126931519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
Isoform_21791_3	chr15	+	3659	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	8	-402	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGAGTTAAAGTGTCG	14	False	NA	NA	False	AGTAAA	-18	NA	9071347	9110577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_21792_6	chr15	+	3501	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	156	-412	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTATATTCACTTGAGT	63	False	NA	NA	False	AGTAAA	-8	NA	9071495	9110567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
Isoform_21796_9	chr15	+	2761	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	-15	5352	-15	-714	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTGAAAGTGAACTGA	17	False	NA	NA	False	TTTAAA	-42	NA	9140621	9197217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
Isoform_21798_24	chr15	+	925	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	22	2	22	-2	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGCCTCCTTTGAAG	19	False	NA	7	True	AATAAA	-20	NA	9436135	9466122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
Isoform_21799_138	chr15	+	1463	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	53	-2	2	2	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGTCCTGTGTCTTTTG	57	False	NA	29	True	AATAAA	-34	NA	10486156	10493777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_21801_4	chr15	+	1354	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	353.147543528197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	43	False	NA	15	True	AATAAA	-20	NA	10486142	10493763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_10486351_10486538_10486803_10490341_10490601_10492850_10492950_10493239
Isoform_21803_4	chr15	+	1695	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	12	5	intron_retention	FALSE	canonical	3	683	junction_1	74.1598779664584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTGTCTTTTGTTC	16	False	NA	32	True	AATAAA	-37	NA	10486115	10493780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_21804_86	chr15	+	1517	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	39	1021	39	598	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCAGTGGTTTTAAG	88	False	NA	33	True	AATAAA	-43	NA	10981880	10995691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
Isoform_21805_3	chr15	+	1485	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	0	1092	0	527	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAACTCTGATCATATA	49	False	NA	-38	True	ATTAAA	-12	NA	10981841	10995620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
Isoform_21806_3	chr15	+	1354	4	NIC	ENSMUSG00000022244.8	novel	2577	5	NA	NA	39	596	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	57.3313953160822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTGAGCAGTGGTTTTA	88	False	NA	31	True	AATAAA	-41	NA	10981880	10995689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_10982140_10983435_10983580_10988844_10989032_10994925
Isoform_21807_7	chr15	+	603	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	-12	-78	3	78	multi-exon	FALSE	canonical	3	26	junction_2	305.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATCATTTGGAAACATT	63	False	NA	NA	False	AATAAA	-12	NA	12117939	12122501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12118034_12118324_12118425_12122092
Isoform_21813_14	chr15	+	4586	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	25	239	-3	-239	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	65	False	NA	13	True	AATAAA	-13	NA	12117941	12185530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_21814_4	chr15	+	3634	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	0	1216	0	4	multi-exon	TRUE	canonical	1	184	junction_8	102.146464828737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTTGTGCTTCAGTTG	40	False	NA	NA	False	ATTAAA	-19	NA	12117916	12184553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
Isoform_21816_5	chr15	+	4345	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-117	131	-41	-6	multi-exon	TRUE	canonical	3	72	junction_5	54.8326747680817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGTGCAAGTTTG	-21	True	NA	22	True	ATTAAA	-25	NA	12205072	12272074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_21817_3	chr15	+	4583	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-110	-114	-34	-7	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGCCATGGTTGGTGT	-14	True	NA	2	True	ATTAAA	-13	NA	12205079	12272319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_21818_8	chr15	+	2197	15	ISM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	35	7341	-22	-4839	5prime_fragment	FALSE	canonical	3	174	junction_5	32.4575861388241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCATCTGTATTTTAT	7	True	NA	NA	False	AATAAA	-14	NA	12205148	12267241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692
Isoform_21819_28	chr15	+	4338	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-6	2508	-6	-6	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGTGCAAGTTTG	14	True	NA	22	True	ATTAAA	-25	NA	12205107	12272074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_2182_20	chr10	-	2497	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	-21	-1	-21	0	multi-exon	FALSE	canonical	3	18	junction_9	9.18628080901302	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	6163	False	NA	-3	True	AATAAA	-16	NA	127024662	127018393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
Isoform_21820_4	chr15	+	4479	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	98	2263	8	-7	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGCCATGGTTGGTGT	70	False	NA	2	True	ATTAAA	-13	NA	12205211	12272319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_21821_4	chr15	+	4470	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-7	2377	-7	0	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATTAGACTGAGTCAG	13	True	NA	NA	False	ATTAAA	-21	NA	12205106	12272205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_21823_4	chr15	+	4583	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-6	2263	-6	-7	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGCCATGGTTGGTGT	14	True	NA	2	True	ATTAAA	-13	NA	12205107	12272319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
Isoform_21824_8	chr15	+	2277	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	376	-1	191	1	multi-exon	FALSE	canonical	3	392	junction_2	32.4174164437712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGCAAGCATGCCATT	291	False	NA	19	True	AATAAA	-27	NA	12321911	12351352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
Isoform_21825_7	chr15	+	2648	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	3	1	3	-1	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGAGCAAGCATGCCA	-2	True	NA	17	True	AATAAA	-25	NA	12321538	12351350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
Isoform_21826_3	chr15	+	2596	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	376	-320	191	-6	multi-exon	FALSE	canonical	3	392	junction_2	32.4174164437712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAATTTTGTTATTTT	291	False	NA	5	True	AATAAA	-7	NA	12321911	12351671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
Isoform_21827_3	chr15	+	2778	15	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	14	67125	-13	-17064	5prime_fragment	FALSE	canonical	3	495	junction_3	75.662010255599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTAATTTAGTTTATGT	67	False	NA	NA	False	ATTAAA	-17	NA	12824962	12868252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681
Isoform_21829_77	chr15	+	4460	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	14	45	-13	-44	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	67	False	NA	-15	True	AATAAA	-13	NA	12824962	12935332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_21830_6	chr15	+	4475	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8713	52	-3774	-51	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACACTGCGGTTGTTGT	49	False	NA	17	True	AATAAA	-6	NA	12833661	12935325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
Isoform_21837_12	chr15	+	5824	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	227	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	56	False	NA	14	True	AATAAA	-15	NA	25753291	25813757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_2184_5	chr10	-	2270	16	FSM	ENSMUSG00000019467.16	ENSMUST00000019611.15	2218	16	-47	-5	17	1	multi-exon	FALSE	canonical	1	3	junction_14	11.8291541916102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTGTTGTCTTGGGAG	4890	False	NA	-2	True	AATAAA	-17	NA	127025935	127018392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025735
Isoform_21843_5	chr15	+	6090	23	NIC	ENSMUSG00000022272.18	novel	748	4	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	157.493040643832	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	68	False	NA	12	True	AATAAA	-13	NA	25758854	25813755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_2185_3	chr10	-	2623	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	18	junction_8	9.21922354866377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6150	False	NA	-4	True	AATAAA	-15	NA	127024675	127018394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
Isoform_21852_23	chr15	+	6008	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	13	False	NA	14	True	AATAAA	-15	NA	25774095	25813757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_21853_3	chr15	+	5471	18	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	180.070612831568	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	95	False	NA	14	True	AATAAA	-15	NA	25780111	25813757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_25780499_25781059_25781951_25783004_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_21855_3	chr15	+	5152	17	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27997	0	717	0	3prime_fragment	FALSE	canonical	3	658	junction_13	51.5299897511148	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	976	False	NA	14	True	AATAAA	-15	NA	25780992	25813757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_2186_20	chr10	-	1961	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	-19	2	0	-2	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031597	127026248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
Isoform_21861_11	chr15	+	3127	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	121	0	121	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	29	False	NA	21	True	TATAAA	-17	NA	25843386	25973773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_21863_29	chr15	+	1931	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	-32	1349	-32	1	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAGAAAAAAAAAAAAACCA	17	True	NA	NA	False	GGGGCT	-14	NA	25843233	25972424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_21864_8	chr15	+	3287	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	-39	0	-39	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	10	True	NA	21	True	TATAAA	-17	NA	25843226	25973773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
Isoform_21867_217	chr15	+	1679	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	70	1053	70	1	multi-exon	FALSE	canonical	3	450	junction_2	26.9962960422351	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGTATTTGAGCAGTGT	36	False	NA	16	True	AATAAA	-23	NA	25984521	25997514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
Isoform_21868_125	chr15	+	1749	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	0	1053	0	1	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGTATTTGAGCAGTGT	27	False	NA	16	True	AATAAA	-23	NA	25984451	25997514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
Isoform_2187_3	chr10	-	3386	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	43	junction_1	44.6392950959876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031589	127026246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127026909_127027204_127027423_127028477_127029673_127030278
Isoform_21870_4	chr15	+	3568	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-74	4	-74	-4	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGCTATTTTCA	17	True	NA	19	True	ATTAAA	-15	NA	27466688	27594991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_21871_7	chr15	+	3046	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-5	457	-5	0	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTGATTGCCTTCAT	47	False	NA	NA	False	AATAAA	-14	NA	27466757	27594538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_21872_7	chr15	+	3114	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-72	456	-72	1	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTGATTGCCTTCATG	19	True	NA	NA	False	AATAAA	-15	NA	27466690	27594539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
Isoform_21873_6	chr15	+	1416	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	136	3	-5	-3	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTCTCTTACGGTT	127	False	NA	18	True	AATAAA	-18	NA	31224595	31274484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
Isoform_21874_6	chr15	+	1473	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	79	3	-62	-3	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTCTCTTACGGTT	70	False	NA	18	True	AATAAA	-18	NA	31224538	31274484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
Isoform_21875_9	chr15	+	1153	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	13	-2	13	2	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGTGACAAGGAGTGTT	128	False	NA	29	True	ATTAAA	-29	NA	31602276	31617683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
Isoform_21876_5	chr15	+	692	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	269	3694	3	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCGTGACAAGGAG	118	False	NA	25	True	ATTAAA	-25	NA	31602266	31617679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_31602296_31617016
Isoform_21878_19	chr15	+	3222	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	94	211	94	-211	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACTCATTGTATAGAC	120	False	NA	NA	False	AATAAA	-15	NA	32920962	33034870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
Isoform_2188_4	chr10	-	2341	5	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	43	junction_1	41.5233368119664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACACCCGTCTTCTGTTC	NA	False	NA	1	True	AATAAA	-26	NA	127031602	127026245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127026909_127027204_127027423_127028477_127029673_127030278_127030504_127031562
Isoform_21880_31	chr15	+	1110	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	94	2323	94	-2323	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTTTGTTATCTGTTTT	120	False	NA	NA	False	AATAAA	-21	NA	32920962	33032758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
Isoform_21883_263	chr15	+	817	2	FSM	ENSMUSG00000022255.17	ENSMUST00000172082.2	4582	2	-6	3771	-6	-3771	multi-exon	FALSE	canonical	3	602	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAAGGTAAGCTTG	21	True	NA	NA	False	AAAACA	-21	NA	34082833	34099720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_34083560_34099629
Isoform_21889_14	chr15	+	2027	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-12	4904	-12	10	multi-exon	TRUE	canonical	3	477	junction_6	48.3699585751527	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATAAAAAAGAAGAA	40	False	NA	NA	False	NA	NA	NA	34082852	34140866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
Isoform_2189_4	chr10	-	987	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTATGCCACACCCG	NA	False	NA	-9	True	AATAAA	-16	NA	127031597	127026255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
Isoform_21894_366	chr15	+	1775	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	121	6	0	1	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACAGTCGTGGCTCCG	111	False	NA	NA	False	ATTAAA	-16	NA	34238294	34284442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
Isoform_21895_15	chr15	+	1826	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	70	6	-51	1	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACAGTCGTGGCTCCG	60	False	NA	NA	False	ATTAAA	-16	NA	34238243	34284442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
Isoform_21898_62	chr15	+	3282	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	5	-12	5	1	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTTTTTAATCTG	99	False	NA	10	True	ATTAAA	-20	NA	34495473	34530795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
Isoform_2190_4	chr10	-	2241	5	NIC	ENSMUSG00000040415.16	novel	1925	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	4	junction_2	54.3162038437886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031600	127026248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127027423_127028477_127029208_127029598_127029673_127030278_127030504_127031562
Isoform_21900_6	chr15	+	1808	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	115	False	NA	13	True	AATAAA	-16	NA	35296241	35303451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
Isoform_21901_12	chr15	+	1725	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	0	-1	0	1	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGAGATTCATCTT	117	False	NA	14	True	AATAAA	-17	NA	35296243	35303452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
Isoform_21903_6	chr15	+	3119	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-1	-73083	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_19	14.5875900659951	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACGAAGAAGAAGA	148	False	NA	NA	False	NA	NA	NA	35371693	35570015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
Isoform_21904_4	chr15	+	1159	3	ISM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	42	565	19	-565	5prime_fragment	FALSE	canonical	3	810	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAGGAAAAAAAA	151	False	NA	NA	False	NA	NA	NA	36174197	36176588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_36174228_36175132_36175203_36175529
Isoform_21905_70	chr15	+	448	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	42	-1	19	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTCTATTCAATGTC	151	False	NA	NA	False	ATTAAA	-13	NA	36174197	36177154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
Isoform_21906_76	chr15	+	388	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	38	63	15	-63	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGGCTTAATTTATTG	147	False	NA	NA	False	TATAAA	-16	NA	36174193	36177090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
Isoform_21907_23	chr15	+	516	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	19	66	19	-63	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGGCTTAATTTATTG	151	False	NA	NA	False	TATAAA	-16	NA	36174197	36177090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
Isoform_21908_16	chr15	+	580	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	19	2	19	1	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTCTATTCAATGTC	151	False	NA	NA	False	ATTAAA	-13	NA	36174197	36177154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
Isoform_2191_6	chr10	-	3315	4	ISM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	0	-262	0	-2	intron_retention	FALSE	canonical	3	105	junction_1	20.8859335970941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031596	127026248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278
Isoform_21910_15	chr15	+	2378	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	18	-8	18	-3	multi-exon	FALSE	canonical	3	39	junction_4	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATGCCTGCGTGTCTG	90	False	NA	NA	False	AATAAA	-22	NA	36210625	36235764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_21912_4	chr15	+	2430	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	-32	-10	-32	-1	multi-exon	FALSE	canonical	3	39	junction_4	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGCCTGCGTGTCTGTA	40	False	NA	NA	False	AATAAA	-24	NA	36210575	36235766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_21913_117	chr15	+	3012	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29336	-5	12002	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	5	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTCTAGTACTTTC	217	False	NA	18	True	AATAAA	-19	NA	37347982	37363811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_37348099_37358613_37358679_37360980
Isoform_21914_31	chr15	+	3063	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29285	-5	11951	-2	3prime_fragment	FALSE	canonical	3	68	junction_1	5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTCTAGTACTTTC	166	False	NA	18	True	AATAAA	-19	NA	37347931	37363811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_37348099_37358613_37358679_37360980
Isoform_21919_3	chr15	+	3022	3	ISM	ENSMUSG00000022286.17	ENSMUST00000159221.2	717	7	12030	-2623	12030	1	3prime_fragment	FALSE	canonical	1	2	junction_2	33	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAACAGCTCTCTAGTAC	245	False	NA	14	True	AATAAA	-15	NA	37348010	37363807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_37348099_37358613_37358721_37360980
Isoform_21920_411	chr15	+	2047	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	16	8	5	-5	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGCAGTGCTAGTCA	200	False	NA	23	True	AATAAA	-9	NA	38662192	38692682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
Isoform_21923_21	chr15	+	2123	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-60	8	-60	-5	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGCAGTGCTAGTCA	124	False	NA	23	True	AATAAA	-9	NA	38662116	38692682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
Isoform_21928_7	chr15	+	1959	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	129	junction_8	403.492951590819	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGCAGTGCTAGTCA	195	False	NA	23	True	AATAAA	-9	NA	38662187	38692682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687259_38687354_38689368_38689467_38690776_38690904_38691855
Isoform_21929_5	chr15	+	4000	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	324	1	25	1	multi-exon	FALSE	canonical	2	8	junction_1	5.64702478203247	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATTGTATTGTGTGC	NA	False	NA	NA	False	AATAAA	-13	NA	38869752	38901582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
Isoform_2193_6	chr10	-	2216	6	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	15	junction_5	54.0244389142544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCACACCCGTCTTC	NA	False	NA	-4	True	AATAAA	-21	NA	127031588	127026250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127030550_127030682_127031562
Isoform_21930_12	chr15	+	1196	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	-31	1	-31	-1	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTGTTTATTTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	38940295	38950515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
Isoform_21932_147	chr15	+	1509	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	40	2	40	1	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGCAGTTGTGTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	38976299	39010249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
Isoform_21933_3	chr15	+	1601	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	-53	3	-53	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38976206	39010248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
Isoform_21936_3	chr15	+	1527	6	ISM	ENSMUSG00000037386.17	ENSMUST00000227381.2	4581	24	179349	43	29639	-43	3prime_fragment	FALSE	canonical	3	30	junction_1	8.62554346113913	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGCTGAATATTTAAATT	NA	False	NA	14	True	ATTAAA	-25	NA	39479741	39545806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
Isoform_21937_4	chr15	+	3745	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-35	805	-35	-805	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTATATGTTATTAG	NA	False	NA	18	True	AATAAA	-15	NA	41310842	41723636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_2194_3	chr10	-	2096	5	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	21	junction_4	47.5939859646153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031597	127026248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562
Isoform_21942_9	chr15	+	2986	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	34016	0	2	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAGTTTCATTTATAAT	NA	False	NA	NA	False	NA	NA	NA	41652336	41690427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
Isoform_21943_72	chr15	+	3541	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	805	0	-803	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATATGTTATTAGTT	NA	False	NA	20	True	AATAAA	-17	NA	41652336	41723638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_21944_43	chr15	+	4339	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	7	0	-5	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAATGAGTTTGGATT	NA	False	NA	NA	False	AATAAA	-13	NA	41652336	41724436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
Isoform_21948_295	chr15	+	1203	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	35	-7	23	7	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTAGTTTCTTTTGTT	NA	False	NA	17	True	AATAAA	-27	NA	43340659	43391166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
Isoform_2195_28	chr10	-	2259	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	-1	-264	0	0	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031597	127026246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
Isoform_21950_25	chr15	+	559	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	-1	0	1	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	9616	False	NA	14	True	AATAAA	-16	NA	44291487	44299264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_21952_3	chr15	+	560	5	NIC	ENSMUSG00000022338.9	novel	558	5	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	93	junction_3	380.98777867538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTATTTTGGAATA	9617	False	NA	18	True	AATAAA	-20	NA	44291488	44299268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_44291567_44292955_44293033_44295833_44295905_44297296_44297370_44299007
Isoform_21953_3	chr15	+	1924	4	NIC	ENSMUSG00000022338.9	novel	558	5	NA	NA	2	1	intron_retention	FALSE	canonical	3	313	junction_1	301.000922848345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	9641	False	NA	14	True	AATAAA	-16	NA	44291512	44299264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_44291567_44292955_44293033_44295833_44297370_44299007
Isoform_21954_4	chr15	+	688	6	NIC	ENSMUSG00000022338.9	novel	767	6	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	410.911864029259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTTTTTATTTTGG	9663	False	NA	14	True	AATAAA	-16	NA	44291534	44299264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_44291639_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
Isoform_21955_99	chr15	+	653	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-18	2365	1	-3	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGACTCTGTTTATTA	9617	False	NA	37	True	AATAAA	-39	NA	44291488	44299287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
Isoform_21959_5	chr15	+	612	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226336.2	2547	5	-7	1942	0	0	multi-exon	FALSE	canonical	3	93	junction_3	350.174510066053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9632	False	NA	13	True	AATAAA	-15	NA	44291503	44299263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297296_44297370_44299007
Isoform_2196_3	chr10	-	3672	3	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	105	junction_1	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTCTATGCCACACCC	NA	False	NA	-10	True	AATAAA	-15	NA	127031589	127026256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127027423_127028477_127029673_127030278
Isoform_21960_3	chr15	+	1990	4	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	627	junction_1	155.701280948131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9646	False	NA	13	True	AATAAA	-15	NA	44291517	44299263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_44291639_44292955_44293033_44295833_44297370_44299007
Isoform_21961_7	chr15	+	1971	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-28	2	-28	-2	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAACTGATTTTCTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	44482542	44504909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_21962_10	chr15	+	1466	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-11	490	-11	-1	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGTATATCCTTAT	NA	False	NA	11	True	ATTAAA	-21	NA	44482559	44504421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_21963_10	chr15	+	1349	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	106	490	106	-1	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGTATATCCTTAT	NA	False	NA	11	True	ATTAAA	-21	NA	44482676	44504421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_21964_3	chr15	+	1858	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	107	-20	107	20	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAATTGTTGAAGATTT	NA	False	NA	NA	False	ATTAAA	-39	NA	44482677	44504931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
Isoform_21965_52	chr15	+	976	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	15	1930	15	0	multi-exon	FALSE	canonical	3	321	junction_1	13	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCATCTTCAGTTGTTG	NA	False	NA	22	True	AGTAAA	-19	NA	51740839	51746080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_21966_87	chr15	+	948	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	46	1927	-3	-2	multi-exon	FALSE	canonical	3	321	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTCAGTTGTTGCTT	NA	False	NA	25	True	AGTAAA	-22	NA	51740870	51746083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_21967_7	chr15	+	2882	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	46	-7	-3	7	multi-exon	FALSE	canonical	3	321	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATAGTTTTTCATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	51740870	51748017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_51741107_51744411_51744587_51745546
Isoform_2197_6	chr10	-	2629	4	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	65	junction_3	35.5559027760824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031597	127026248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127027423_127028477_127029673_127030278_127030504_127031562
Isoform_21973_62	chr15	+	1299	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	48	1	48	-1	multi-exon	FALSE	canonical	3	258	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTTCTAGTGGTCA	NA	False	NA	15	True	AATAAA	-26	NA	51903550	51909117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_51903927_51908194
Isoform_21974_371	chr15	+	870	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	6	131	6	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	19	True	AATAAA	-32	NA	52575843	52593829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
Isoform_21975_60	chr15	+	910	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-34	131	0	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	19	True	AATAAA	-32	NA	52575803	52593829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
Isoform_2198_547	chr10	-	3323	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-23	7	7	-7	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047447	127032942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
Isoform_21981_3	chr15	+	4940	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	25	3582	25	1487	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54975737	55119085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
Isoform_21982_9	chr15	+	4821	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	144	3582	37	1487	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54975856	55119085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
Isoform_21987_116	chr15	+	2954	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	190	0	3	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420993	55489819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_21988_26	chr15	+	3163	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	-19	0	-19	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420784	55489819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
Isoform_21989_5	chr15	+	3702	21	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	131	junction_14	24.4917843367934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTTGGATTGCATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	55420990	55489817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
Isoform_2199_160	chr10	-	3356	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-49	0	-19	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047473	127032935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
Isoform_21991_6	chr15	+	3589	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-28	-8	7	8	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGTAATTGAAAATGTT	NA	False	NA	10	True	AATAAA	-24	NA	57775601	57822806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
Isoform_21992_19	chr15	+	3467	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775629	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
Isoform_21993_11	chr15	+	3528	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-26	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775568	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
Isoform_21994_67	chr15	+	3272	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	35	4	0	-4	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775629	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_21995_8	chr15	+	3172	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_19	47.7117383072465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775638	57833458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
Isoform_21997_7	chr15	+	3296	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_14	64.5088366039878	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775601	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_21998_10	chr15	+	3174	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	17	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57775611	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_21999_6	chr15	+	2584	16	ISM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	23828	4	20014	-4	3prime_fragment	FALSE	canonical	3	200	junction_4	37.4619214076848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57799422	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
Isoform_220_441	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
Isoform_22000_5	chr15	+	665	3	ISM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	5277	10	5277	-4	3prime_fragment	FALSE	canonical	3	284	junction_1	37.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57827085	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_57827321_57831304_57831401_57833119
Isoform_22001_3	chr15	+	680	2	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	5166	-4	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATCAAAGCTGAACTGT	NA	False	NA	4	True	AATAAA	-11	NA	57826974	57833453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57827321_57833119
Isoform_22002_3	chr15	+	600	2	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	5252	2	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	False	NA	10	True	AATAAA	-17	NA	57827060	57833459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_57827321_57833119
Isoform_22003_27	chr15	+	2245	5	NNC	ENSMUSG00000051225.10	novel	2876	4	NA	NA	-216	-320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.11737237261468	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATTAAAAAACTG	9488	False	NA	NA	False	NA	NA	NA	57849089	57874085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_57849360_57849395_57849938_57856302_57856471_57858609_57858735_57872945
Isoform_22006_10	chr15	+	1376	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	0	7	0	-7	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2660	False	NA	20	True	AATAAA	-10	NA	58004772	58022043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
Isoform_22007_4	chr15	+	1227	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-15	-414	0	-7	multi-exon	FALSE	canonical	3	22	junction_3	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2660	False	NA	20	True	AATAAA	-10	NA	58004772	58022043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
Isoform_22008_3	chr15	+	1387	6	NIC	ENSMUSG00000022359.11	novel	1383	6	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.2283702200806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTGCTTTTGAA	2657	False	NA	20	True	AATAAA	-10	NA	58004769	58022043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_58004978_58011729_58011838_58014001_58014053_58015992_58016142_58016975_58017101_58021297
Isoform_22009_40	chr15	+	5560	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-2	2	-2	-2	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTGTGGAGAGTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	58287314	58329587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_22011_3	chr15	+	5623	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-1	-62	-1	62	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTGGCTTTCCTGTGT	NA	False	NA	3	True	ATTAAA	-16	NA	58287315	58329651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_22013_7	chr15	+	2809	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-29	2780	-29	-2780	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGCCTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	58287287	58326809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
Isoform_22014_4	chr15	+	2637	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-297	2008	-297	-2008	multi-exon	FALSE	canonical	3	140	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGAACAAATAGCTTC	NA	False	NA	82	True	AATAAA	-22	NA	58760780	58772231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58761344_58770157
Isoform_22016_1968	chr15	+	644	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	64	-4	12	4	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	1968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2880	False	NA	17	True	AATAAA	-18	NA	58805668	58811341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
Isoform_22021_1633	chr15	+	2801	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-42	-1	-38	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186887	59203042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
Isoform_22022_56	chr15	+	2825	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-66	-1	-62	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186863	59203042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
Isoform_22025_6	chr15	+	779	4	ISM	ENSMUSG00000059586.11	ENSMUST00000168722.3	2679	5	-3	83963	-3	-83963	5prime_fragment	FALSE	canonical	3	929	junction_1	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAACAATGGTAATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59246092	59327550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161
Isoform_22026_54	chr15	+	1178	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-44	-12	-6	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246089	59473533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
Isoform_22028_399	chr15	+	1067	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-13	0	-11	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246122	59473533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
Isoform_2203_4	chr10	-	4025	28	FSM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	-33	4	-18	-4	multi-exon	FALSE	canonical	3	28	junction_13	6.98675996544999	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGGCTGCTGTCCATCG	NA	False	NA	-11	True	ATTAAA	-14	NA	127098982	127064922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
Isoform_22031_39	chr15	+	3629	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	146	555	146	-555	multi-exon	FALSE	canonical	3	22	junction_1	4.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATACAGTGAGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	59520344	59528393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_59521372_59523327_59523621_59526084
Isoform_22033_7	chr15	+	2417	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	658	-1	-24	1	multi-exon	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTGAGTTCCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	60694777	60700500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_60696633_60699180_60699212_60699969
Isoform_22035_113	chr15	+	2182	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	159	-3	-14	3	multi-exon	FALSE	canonical	3	22	junction_2	2	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857398	61862202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_61857801_61859355_61860128_61861194
Isoform_22036_16	chr15	+	2346	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	-5	-3	-5	3	multi-exon	FALSE	canonical	3	22	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857234	61862202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_61857801_61859355_61860128_61861194
Isoform_22040_30	chr15	+	2179	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	-14	21	-14	3	multi-exon	FALSE	canonical	3	8	junction_1	7	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857398	61862202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_61857801_61859358_61860128_61861194
Isoform_22041_8	chr15	+	2343	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	-178	21	-5	3	multi-exon	FALSE	canonical	3	8	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATTGGGCCAAC	NA	False	NA	NA	False	AATAAA	-10	NA	61857234	61862202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_61857801_61859358_61860128_61861194
Isoform_22044_5	chr15	+	1315	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	6.0736223860962	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATTGAAGTCATGATT	NA	False	NA	23	True	AATAAA	-31	NA	61909872	62121373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
Isoform_22045_3	chr15	+	1340	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.7817450199525	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAAGTCATGATTGTCA	NA	False	NA	27	True	AATAAA	-35	NA	61909876	62121377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
Isoform_22051_12	chr15	+	5198	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	11	6	3	-6	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658899	65745659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
Isoform_22054_5	chr15	+	3260	9	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	18.1916876622264	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCTAATTACTTTC	3830	False	NA	NA	False	AATAAA	-17	NA	66449408	66483466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
Isoform_22055_3	chr15	+	1592	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	296	-1	3	1	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTTTGTGTGTGTGA	NA	False	NA	8	True	AATAAA	-8	NA	68800564	68965362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
Isoform_22057_242	chr15	+	852	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	20	-1	0	1	multi-exon	FALSE	canonical	3	479	junction_2	8	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTTCATTGAAGTGGT	NA	False	NA	8	True	ATTAAA	-19	NA	72962260	72965925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_72962433_72964681_72964809_72965372
Isoform_22059_9	chr15	+	2756	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-96	24152	16	-9765	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATGTTGTATACAATA	NA	False	NA	NA	False	NA	NA	NA	73384424	73419796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
Isoform_2206_3	chr10	-	1954	7	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-475	-2	intron_retention	FALSE	canonical	3	40	junction_5	32.7159492195066	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	422	False	NA	-8	True	NA	NA	NA	127120715	127117826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566
Isoform_22060_3	chr15	+	2746	13	NNC	ENSMUSG00000036661.15	novel	5299	23	NA	NA	23	-9763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.63580745930354	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGTTGTATACAATATG	NA	False	NA	NA	False	NA	NA	NA	73384431	73419798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416799_73416995_73418969
Isoform_22061_21	chr15	+	1709	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	-28	-1	-28	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGAAGAGTGTTATA	NA	False	NA	21	True	AATAAA	-15	NA	73596618	73629077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_22062_32	chr15	+	1721	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	-1	1540	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73620221	73629075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_22063_3	chr15	+	812	2	FSM	ENSMUSG00000034730.18	ENSMUST00000230935.2	752	2	452	-512	452	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTTGTAGTCTTTTTT	NA	False	NA	2	True	AATAAA	-14	NA	74460224	74461311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74460261_74460535
Isoform_22065_36	chr15	+	1506	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	12	266	12	-266	multi-exon	FALSE	canonical	3	79	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGCCGGGGAGGTTC	4652	False	NA	13	True	ATTAAA	-14	NA	74593064	74596222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74593657_74595308
Isoform_22067_4	chr15	+	1174	5	FSM	ENSMUSG00000022587.15	ENSMUST00000191145.7	431	5	-24	-719	-5	-2	multi-exon	FALSE	canonical	0	0	junction_2	290.246770007868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGCTATGTCCTGGTT	8382	False	NA	25	True	AATAAA	-13	NA	74827496	74831178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829263_74829313_74829628_74829727_74830117_74830238_74830341
Isoform_22068_3	chr15	+	1261	3	ISM	ENSMUSG00000022587.15	ENSMUST00000191127.7	575	5	360	-670	-33	-1	intron_retention	FALSE	canonical	3	397	junction_1	126.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTATGTCCTGGTTG	8354	False	NA	26	True	AATAAA	-14	NA	74827468	74831179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_74827567_74829625_74829727_74830117
Isoform_22069_60	chr15	+	1158	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	442	-676	-33	0	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8354	False	NA	27	True	AATAAA	-15	NA	74827468	74831180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
Isoform_2207_4	chr10	-	1951	7	NIC	ENSMUSG00000025409.15	novel	2909	8	NA	NA	-472	-2	intron_retention	FALSE	canonical	3	41	junction_4	32.087120988542	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	425	False	NA	-8	True	NA	NA	NA	127120712	127117826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566
Isoform_22070_94	chr15	+	1128	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	470	-674	-5	-2	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGCTATGTCCTGGTT	8382	False	NA	25	True	AATAAA	-13	NA	74827496	74831178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
Isoform_22071_5	chr15	+	1253	3	FSM	ENSMUSG00000022587.15	ENSMUST00000188503.2	1211	3	-42	0	-27	0	multi-exon	FALSE	canonical	3	296	junction_1	177	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8360	False	NA	27	True	AATAAA	-15	NA	74827474	74831180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829628_74829727_74830117
Isoform_22072_62	chr15	+	1127	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8382	False	NA	27	True	AATAAA	-15	NA	74827496	74831180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
Isoform_22073_38	chr15	+	1158	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-36	0	-36	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8351	False	NA	27	True	AATAAA	-15	NA	74827465	74831180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
Isoform_22074_64	chr15	+	3517	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	17	6	12	-6	multi-exon	FALSE	canonical	3	54	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTCCTGTGCTCTGT	NA	False	NA	11	True	AGTAAA	-11	NA	75488544	75497143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75488670_75489892_75491541_75495399
Isoform_22075_5	chr15	+	3726	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	11	4533	11	-6	multi-exon	FALSE	canonical	2	8	junction_1	23	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTCCTGTGCTCTGT	NA	False	NA	11	True	AGTAAA	-11	NA	75488543	75497143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75488878_75489892_75491541_75495399
Isoform_22076_6	chr15	+	1115	3	FSM	ENSMUSG00000099034.8	ENSMUST00000183928.8	1459	3	340	4	-6	-4	multi-exon	FALSE	canonical	2	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGATGGAGTCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	75514317	75519282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75514361_75517197_75517294_75518306
Isoform_22077_7	chr15	+	2311	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	-28	1077	-28	0	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTCTGAGTCGGGTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	75576100	75586257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
Isoform_22078_14	chr15	+	1789	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	-10	13	-10	-4	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGCATAATGCTGTG	NA	False	NA	2	True	AATAAA	-7	NA	75734165	75739244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
Isoform_2208_20	chr10	-	2825	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	132	5	24	-1	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147523	127132095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_22080_6	chr15	+	2975	9	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-60	-4	intron_retention	FALSE	canonical	3	41	junction_1	5.42995165724337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734115	75739253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_75734331_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
Isoform_22081_66	chr15	+	2400	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	87	-1	87	1	multi-exon	FALSE	canonical	3	106	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812887	75821250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75813009_75818971
Isoform_22083_8	chr15	+	2470	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	17	-1	17	1	multi-exon	FALSE	canonical	3	106	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812817	75821250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75813009_75818971
Isoform_22084_3	chr15	+	2525	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	-38	-1	-38	1	multi-exon	FALSE	canonical	3	106	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812762	75821250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75813009_75818971
Isoform_22085_44	chr15	+	1630	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	172	1	-12	-1	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAGCCTGTTCTTCAGC	NA	False	NA	10	True	AATAAA	-15	NA	75841143	75847597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
Isoform_22086_18	chr15	+	1743	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	56	4	0	1	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGAAGCCTGTTCTTC	NA	False	NA	7	True	AATAAA	-12	NA	75841027	75847594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
Isoform_22087_5	chr15	+	1586	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109967.10	1703	4	116	1	-12	1	multi-exon	FALSE	canonical	1	1	junction_1	16.779617264871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGAAGCCTGTTCTTC	NA	False	NA	7	True	AATAAA	-12	NA	75841143	75847594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75841254_75844971_75845058_75845390_75845505_75846318
Isoform_22088_7	chr15	+	1957	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-9	1	intron_retention	FALSE	canonical	3	13	junction_1	29.8533452434099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTCTCCTTGTCTC	NA	False	NA	14	True	AATAAA	-15	NA	76130954	76134105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76131101_76131839_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
Isoform_22089_54	chr15	+	1711	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	15	-1	15	1	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTCTCCTTGTCTC	NA	False	NA	14	True	AATAAA	-15	NA	76130989	76134105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
Isoform_2209_17	chr10	-	2854	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	103	5	-5	-1	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147552	127132095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_22091_94	chr15	+	1729	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	68	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	330.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAATGTCTTCTTTC	947	False	NA	9	True	NA	NA	NA	76211664	76214878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_22093_43	chr15	+	1747	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	44	5	-24	-1	multi-exon	FALSE	canonical	0	0	junction_1	330.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACTGGACTAATGTCT	923	False	NA	3	True	NA	NA	NA	76211640	76214872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_22094_276	chr15	+	812	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	68	916	0	666	multi-exon	FALSE	canonical	0	0	junction_1	330.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACCTTACTGTACAGCAC	947	False	NA	14	True	AATAAA	-20	NA	76211664	76213961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76211864_76213229_76213437_76213555
Isoform_22099_641	chr15	+	2024	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	76	7	-37	2	multi-exon	FALSE	non_canonical	3	197	junction_6	31.5777932223483	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4789	False	NA	17	True	AATAAA	-20	NA	76215506	76219100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_2210_561	chr10	-	2825	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	108	6	0	-1	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147547	127132095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_22100_31	chr15	+	2082	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	18	7	18	2	multi-exon	TRUE	non_canonical	3	197	junction_6	31.5777932223483	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4731	False	NA	17	True	AATAAA	-20	NA	76215448	76219100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_22103_29	chr15	+	2103	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-39	2	intron_retention	FALSE	non_canonical	3	245	junction_2	20.9035882087263	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4787	False	NA	17	True	AATAAA	-20	NA	76215504	76219100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_22105_10	chr15	+	2118	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-39	1	intron_retention	FALSE	non_canonical	1	1	junction_3	85.5794367824421	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4787	False	NA	16	True	AATAAA	-19	NA	76215504	76219099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76215664_76216095_76216276_76216359_76216488_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_22108_17	chr15	+	2315	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-39	2	intron_retention	FALSE	non_canonical	3	245	junction_2	19.9208309609022	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4787	False	NA	17	True	AATAAA	-20	NA	76215504	76219100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_2211_764	chr10	-	2801	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	132	6	24	-1	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147523	127132095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_22110_12	chr15	+	2277	11	ISM	ENSMUSG00000022561.14	ENSMUST00000164972.8	2237	12	142	-2	-27	2	3prime_fragment	FALSE	non_canonical	3	197	junction_5	30.9497980607305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGATCCTGGCCCGCT	4968	False	NA	17	True	AATAAA	-20	NA	76215685	76219100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
Isoform_22119_3280	chr15	+	1182	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	11	327	1	1	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	3280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATTTTAGCTGGTCAA	NA	False	NA	26	True	AATAAA	-16	NA	76227733	76230133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_2212_89	chr10	-	2890	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	43	6	43	-1	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGAGCCCTCTCCTGGTC	NA	False	NA	-12	True	AATAAA	-21	NA	127147612	127132095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
Isoform_22130_89	chr15	+	1775	6	FSM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	18	-2	-10	2	multi-exon	FALSE	canonical	3	4240	junction_4	274.648866737149	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227750	76230134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
Isoform_22138_22	chr15	+	1726	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	19	-2	4	1	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAACCTGGGAGTTTGTG	NA	False	NA	25	True	AATAAA	-17	NA	76235512	76238574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_22140_458	chr15	+	1663	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	23	0	2	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235528	76238573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_22141_13	chr15	+	1674	8	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	221.621114443879	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAACCTGGGAGTTT	NA	False	NA	22	True	AATAAA	-14	NA	76235511	76238571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76235860_76236623_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_22142_189	chr15	+	1616	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	35	0	2	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235528	76238573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_22146_34	chr15	+	2428	7	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	-1	2	intron_retention	FALSE	canonical	3	633	junction_2	18.2094297915485	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	False	NA	26	True	AATAAA	-18	NA	76235525	76238575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
Isoform_22150_8	chr15	+	2410	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	3	-420	3	420	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCGTGTAGACTAGTGTT	3547	False	NA	NA	False	NA	NA	NA	76253100	76256057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
Isoform_22153_25	chr15	+	5249	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	19	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264731	76337238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
Isoform_22154_25	chr15	+	2182	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATATATATATAT	7137	False	NA	19	True	NA	NA	NA	76361637	76385179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_22155_4	chr15	+	2246	13	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	4	2	intron_retention	FALSE	canonical	3	17	junction_9	107.170813812966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7138	False	NA	14	True	NA	NA	NA	76361638	76385174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384537_76384616
Isoform_22156_181	chr15	+	2111	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-27	0	-4	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7117	False	NA	12	True	NA	NA	NA	76361617	76385172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_22158_10	chr15	+	2161	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-77	0	-54	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7067	False	NA	12	True	NA	NA	NA	76361567	76385172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_22159_21	chr15	+	2164	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	3	3	intron_retention	FALSE	canonical	3	226	junction_10	34.6941774713456	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	7137	False	NA	15	True	NA	NA	NA	76361637	76385175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
Isoform_22160_15	chr15	+	2050	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-33	1	-10	1	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7111	False	NA	11	True	NA	NA	NA	76361611	76385171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
Isoform_22161_18	chr15	+	2024	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-6	0	4	0	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7138	False	NA	12	True	NA	NA	NA	76361638	76385172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
Isoform_22162_6	chr15	+	2240	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	262	junction_4	29.8745711266287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATATATATA	7139	False	NA	16	True	NA	NA	NA	76361639	76385176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384537_76384616
Isoform_22163_5	chr15	+	2239	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-3	1	intron_retention	FALSE	canonical	3	205	junction_10	42.1345738562714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATATATATATAT	7118	False	NA	19	True	NA	NA	NA	76361618	76385179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
Isoform_22164_22	chr15	+	2242	3	FSM	ENSMUSG00000022560.10	ENSMUST00000230994.2	2889	3	-94	741	38	-741	multi-exon	FALSE	canonical	3	120	junction_1	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423069	76425589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76423396_76423582_76423803_76423893
Isoform_22165_15	chr15	+	2190	4	ISM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	3219	-2	-741	intron_retention	FALSE	canonical	3	120	junction_1	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423029	76425589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871
Isoform_22166_250	chr15	+	2072	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	3219	-2	-741	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423029	76425589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
Isoform_22167_7	chr15	+	2814	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-2	2477	-2	1	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACAATGTGTCCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	76423029	76426331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
Isoform_22168_6	chr15	+	2162	4	NIC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	0	-741	intron_retention	FALSE	canonical	3	110	junction_3	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTGTTAATCCCATGA	NA	False	NA	4	True	AATAAA	-14	NA	76423031	76425589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76423396_76423582_76423803_76423893_76424996_76425113
Isoform_22170_250	chr15	+	1980	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	54	6	0	1	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3156	False	NA	NA	False	NA	NA	NA	76460611	76480010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_22171_7	chr15	+	2048	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_10	18.314155291022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3157	False	NA	NA	False	NA	NA	NA	76460612	76480009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
Isoform_22172_8	chr15	+	2083	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	-7	1	intron_retention	FALSE	canonical	3	116	junction_9	17.5296874138817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3116	False	NA	NA	False	NA	NA	NA	76460571	76480010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_22174_5	chr15	+	2055	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	-1	intron_retention	FALSE	canonical	3	114	junction_9	18.1199161407206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAATCGTTTTCTTT	3156	False	NA	NA	False	NA	NA	NA	76460611	76480007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_22175_5	chr15	+	2049	14	NIC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	-4	1	intron_retention	FALSE	canonical	2	13	junction_4	37.4853028398342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATCGTTTTCTTTGTG	3145	False	NA	NA	False	NA	NA	NA	76460600	76480010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
Isoform_22176_53	chr15	+	2808	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	19	0	19	0	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555865	76579119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_22178_18	chr15	+	2659	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	33	0	1	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555847	76579119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_22179_144	chr15	+	2633	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	59	0	27	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555873	76579119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_22180_3	chr15	+	2490	10	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	41	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	40.3732584763727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTTCCCATGTGTCTC	NA	False	NA	19	True	GATAAA	-14	NA	76555887	76579116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577638_76577715_76577794_76577925_76578067_76578231_76578497
Isoform_22182_9	chr15	+	1042	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	-33	-27	-33	0	multi-exon	FALSE	canonical	3	10	junction_4	4.40908153700972	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACTCACCTGACTGG	5956	False	NA	29	True	AATAAA	-45	NA	76582377	76583875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
Isoform_22183_23	chr15	+	1506	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	8	732	8	17	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGCTCTCCTCAAACT	9251	False	NA	21	True	AATAAA	-34	NA	76585672	76587707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
Isoform_22185_10	chr15	+	2417	5	NIC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.7282877674126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTGCTTTATCATGAC	NA	False	NA	NA	False	NA	NA	NA	76594840	76599295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76595128_76595555_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_22186_17	chr15	+	2240	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	1	2608	0	0	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594838	76599291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
Isoform_22188_3	chr15	+	2286	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	13	2550	2	19	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGGCTATCCCACTAT	NA	False	NA	NA	False	AATATA	-16	NA	76594850	76599349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
Isoform_22189_7	chr15	+	2470	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-49	1522	1	-4	multi-exon	FALSE	canonical	3	39	junction_1	41.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATACTGCCCCCTAGT	NA	False	NA	NA	False	NA	NA	NA	76594823	76599326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76595128_76597066_76598186_76598279
Isoform_22190_3	chr15	+	2388	4	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	4	6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	48.3206880009887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTTTATCATGACCA	NA	False	NA	NA	False	NA	NA	NA	76594852	76599297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_76595284_76597066_76597421_76597600_76598186_76598279
Isoform_22191_15	chr15	+	2861	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	-22	-7	-2	0	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594820	76599291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
Isoform_22193_37	chr15	+	2789	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	-19	2	-19	-2	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763439	76776593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_22194_45	chr15	+	2709	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	61	2	-2	-2	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763519	76776593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_22195_4	chr15	+	2762	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	38.4341970125564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTAGCCTGTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	76763514	76776591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772598_76774206
Isoform_22196_15	chr15	+	2706	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	34.1055347414463	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763519	76776593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772433_76772548_76774206
Isoform_22197_13	chr15	+	2951	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	11	-2	-2	2	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTAGCCTGTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	76763519	76776591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
Isoform_22198_3	chr15	+	2958	5	NNC	ENSMUSG00000033669.9	novel	2960	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	39.8810732052185	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTAGCCTGTACTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76763511	76776593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_76763798_76764938_76764983_76765311_76765439_76772433_76772548_76774206
Isoform_222_181	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
Isoform_2220_5	chr10	-	4068	13	FSM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	-12	1	-12	-1	multi-exon	FALSE	canonical	2	10	junction_12	8.16964231503164	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCACCTGTCATGTTGG	2726	False	NA	NA	False	AATAAA	-16	NA	127177855	127165751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
Isoform_22200_64	chr15	+	1023	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	10	4	10	-4	multi-exon	TRUE	canonical	3	114	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTATTCTATTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	76784119	76785501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76784193_76784551
Isoform_22201_38	chr15	+	1006	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	22	-108	-7	4	multi-exon	FALSE	canonical	3	59	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGTTATTCTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	76784157	76785499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76784216_76784551
Isoform_22202_3500	chr15	+	841	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	7	3	7	-3	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	3500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCGGCGTGTGTGAGCC	NA	False	NA	31	True	AATAAA	-15	NA	76788284	76790511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
Isoform_22203_175	chr15	+	880	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	-30	1	-30	-1	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGCGTGTGTGAGCCTC	NA	False	NA	33	True	AATAAA	-17	NA	76788247	76790513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
Isoform_22215_3	chr15	+	1245	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-201	-1	-201	1	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832504	76834930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_22216_59	chr15	+	1034	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	10	-1	-6	1	multi-exon	FALSE	canonical	1	74	junction_2	101.489839392917	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832715	76834930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_22217_28	chr15	+	1105	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	7	-1	0	1	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATGGTGTGAGAGAG	NA	False	NA	22	True	AATAAA	-14	NA	76832728	76834930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
Isoform_22220_48	chr15	+	1257	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-3	57	3	multi-exon	FALSE	canonical	3	16	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTGTGGTTGTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	78294238	78298209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78294865_78297578
Isoform_22222_27	chr15	+	3034	6	ISM	ENSMUSG00000033287.18	ENSMUST00000089414.12	1180	7	32	-394	-2	0	intron_retention	FALSE	canonical	3	64	junction_5	26.081411004775	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312859	78323503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100
Isoform_22223_7	chr15	+	2872	7	NIC	ENSMUSG00000033287.18	novel	1180	7	NA	NA	-2	1	intron_retention	FALSE	canonical	2	11	junction_6	43.4105082004602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTCTGGGCCACTT	NA	False	NA	25	True	AATAAA	-32	NA	78312859	78323504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357
Isoform_22224_4	chr15	+	2762	6	ISM	ENSMUSG00000033287.18	ENSMUST00000162517.9	901	8	96	-791	-2	-15	intron_retention	FALSE	canonical	1	3	junction_5	48.5691259958423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGGCTGCCACCCTT	NA	False	NA	9	True	AATAAA	-16	NA	78312859	78323488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321357
Isoform_22225_4	chr15	+	1533	7	FSM	ENSMUSG00000033287.18	ENSMUST00000166142.11	1632	7	96	3	-2	-3	multi-exon	FALSE	canonical	2	4	junction_5	55.6339724349151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTTTTTCTCTGGGCC	NA	False	NA	21	True	AATAAA	-28	NA	78312859	78323500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
Isoform_22226_54	chr15	+	1431	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	-2	-443	-2	-17	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCTGGCTGCCACCC	NA	False	NA	7	True	AATAAA	-14	NA	78312859	78323486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
Isoform_22227_49	chr15	+	2545	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	19	-4	19	4	multi-exon	FALSE	canonical	3	20	junction_1	1.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTGGGGAAAAGCACAG	NA	False	NA	NA	False	AATAAA	-24	NA	78726842	78735101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78726926_78731294_78732020_78733364
Isoform_22228_15	chr15	+	2756	16	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	361	1	0	-1	intron_retention	FALSE	canonical	3	379	junction_6	54.8406175506197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761750	78778784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738
Isoform_22229_1328	chr15	+	2678	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	356	0	-5	0	multi-exon	FALSE	canonical	3	379	junction_6	54.6157028701453	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761745	78778785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
Isoform_22230_43	chr15	+	3035	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	-1	0	-1	0	multi-exon	TRUE	canonical	3	379	junction_6	54.6157028701453	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761388	78778785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
Isoform_22242_10	chr15	+	3717	17	ISM	ENSMUSG00000022436.17	ENSMUST00000061239.14	1917	18	29	7	29	-3	intron_retention	FALSE	canonical	3	401	junction_16	46.1503995107301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4427	False	NA	80	True	AATAAA	-13	NA	78783996	78796244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
Isoform_22245_864	chr15	+	2511	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-139	3	-4	-3	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4394	False	NA	80	True	AATAAA	-13	NA	78783963	78796244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
Isoform_22246_40	chr15	+	2538	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-166	3	-31	-3	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4367	False	NA	80	True	AATAAA	-13	NA	78783936	78796244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
Isoform_22249_13	chr15	+	1890	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	26	7	26	-3	multi-exon	FALSE	canonical	3	8	junction_17	114.336569876277	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	4424	False	NA	80	True	AATAAA	-13	NA	78783993	78796244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
Isoform_22253_695	chr15	+	1972	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	29	0	29	0	multi-exon	FALSE	canonical	3	228	junction_1	0	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	False	NA	24	True	AATAAA	-18	NA	78798147	78803717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78798732_78802329
Isoform_22257_371	chr15	+	529	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	270	0	4	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCCCTTTCATGGGAG	NA	False	NA	13	True	AATAAA	-24	NA	78810925	78814395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
Isoform_22259_436	chr15	+	949	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	-2	2774	-2	0	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819130	78825064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_22260_6	chr15	+	1405	7	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	219.064424821152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819385	78825065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_78819895_78820008_78820100_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_22261_37	chr15	+	1304	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819395	78825065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_22262_5	chr15	+	1507	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	-6	5	intron_retention	FALSE	canonical	3	6	junction_1	186.864014727288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGCTTGTGCTTTGTC	NA	False	NA	15	True	NA	NA	NA	78819401	78825069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_78820100_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
Isoform_22263_10	chr15	+	1655	8	FSM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	8	-3	8	3	multi-exon	FALSE	canonical	3	19	junction_7	63.6226118191786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGAAATGGATTCTTC	NA	False	NA	NA	False	AATAAA	-28	NA	78867284	78879062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497
Isoform_22264_5	chr15	+	1715	8	FSM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	-44	-11	-8	11	multi-exon	FALSE	canonical	3	19	junction_7	63.6226118191786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGATTCTTCTCAGACTG	NA	False	NA	NA	False	AATAAA	-36	NA	78867232	78879070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497
Isoform_22265_393	chr15	+	2554	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	21	-5	-15	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78867261	78890069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
Isoform_22267_9	chr15	+	2629	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	-54	-5	-54	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78867186	78890069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
Isoform_22269_1134	chr15	+	1438	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	41	891	41	-891	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	673	False	NA	14	True	NA	NA	NA	78915114	78921662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
Isoform_22271_17	chr15	+	1718	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	20	632	20	-632	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAATTGTTCCTAGAC	652	False	NA	NA	False	GATAAA	-13	NA	78915093	78921921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
Isoform_22278_766	chr15	+	1876	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	61	5	-8	-5	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	25	True	AGTAAA	-15	NA	78959439	78978600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
Isoform_22279_754	chr15	+	1910	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	27	5	27	-5	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	25	True	AGTAAA	-15	NA	78959405	78978600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
Isoform_22286_3	chr15	+	3119	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-16	3609	-16	4	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTCCCAACCAGTTG	6015	False	NA	NA	False	NA	NA	NA	78993147	79017491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
Isoform_22289_22	chr15	+	724	4	ISM	ENSMUSG00000033020.8	ENSMUST00000229973.2	414	5	-22	-173	-7	3	intron_retention	FALSE	canonical	3	2040	junction_3	39.0640499692492	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025543	79035967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535
Isoform_22290_1997	chr15	+	543	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	335	7	-7	3	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	1997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025543	79035967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
Isoform_22291_73	chr15	+	571	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	307	7	-35	3	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025515	79035967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
Isoform_22294_17	chr15	+	1810	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	225	19	-13	-1	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4399	False	NA	17	True	AATAAA	-17	NA	79113597	79133665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_22295_6	chr15	+	2048	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	-14	20	-14	-2	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4160	False	NA	16	True	AATAAA	-16	NA	79113358	79133664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_22296_234	chr15	+	1951	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	25	1	-4	-1	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4408	False	NA	17	True	AATAAA	-17	NA	79113606	79133665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_22298_3	chr15	+	1916	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	66.3727266501476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4379	False	NA	16	True	AATAAA	-16	NA	79113577	79133664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
Isoform_22299_11	chr15	+	1931	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	25	2	25	2	multi-exon	FALSE	canonical	3	18	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGTGTATGTCTTGG	2290	False	NA	20	True	AATAAA	-21	NA	79231744	79243274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79231955_79241166_79241234_79241620
Isoform_22300_7	chr15	+	1988	3	FSM	ENSMUSG00000042622.15	ENSMUST00000163691.3	1902	3	-80	-6	-80	2	multi-exon	FALSE	canonical	3	16	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTATGTCTTGGACTA	2729	False	NA	24	True	AATAAA	-25	NA	79232183	79243278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79232447_79241166_79241234_79241620
Isoform_22302_121	chr15	+	1380	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	31	0	31	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400642	79411940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
Isoform_22303_10	chr15	+	1503	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	-94	2	-94	-2	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCAAGTATTTATTTA	NA	False	NA	9	True	AATAAA	-14	NA	79400517	79411938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
Isoform_22306_229	chr15	+	1121	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	25	1	25	-1	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCTGTGTAGCAAAAATA	9584	False	NA	NA	False	ATTAAA	-13	NA	79543424	79551860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
Isoform_22307_639	chr15	+	1023	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	11	535	-9	185	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTATTGCTGTGTTTG	8189	False	NA	19	True	ATTAAA	-15	NA	79555072	79557066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
Isoform_2231_523	chr10	-	2022	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_127353629_127353649_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_22314_89	chr15	+	3406	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	40	3	40	-3	multi-exon	TRUE	canonical	3	199	junction_6	19.3826198026279	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTGTCATGTTCCCTG	NA	False	NA	14	True	AATAAA	-15	NA	79575085	79605677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
Isoform_22315_89	chr15	+	3399	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	50	0	50	0	multi-exon	FALSE	canonical	3	199	junction_6	19.3826198026279	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575095	79605680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
Isoform_22317_3	chr15	+	3221	12	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	50	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.8303605005803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACAGTGTCATGTTCCCT	NA	False	NA	13	True	AATAAA	-14	NA	79575095	79605676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79592069_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
Isoform_22318_72	chr15	+	1936	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	7501	False	NA	-9	True	NA	NA	NA	79775858	79792104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_2232_149	chr10	-	2091	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-47	194	11	-178	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358302	127353185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_22321_216	chr15	+	1915	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	23	15	15	-3	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8269	False	NA	-9	True	NA	NA	NA	79776626	79792104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_22322_6	chr15	+	2934	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	5	-480	2	473	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATTTTTTCTTCATTGT	8256	False	NA	18	True	NA	NA	NA	79776613	79793110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_22323_18	chr15	+	1939	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	-1	15	-1	-3	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8245	False	NA	-9	True	NA	NA	NA	79776602	79792104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_22327_9	chr15	+	1799	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-5	183	1	-3	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGACAAGATTA	8286	False	NA	-9	True	NA	NA	NA	79776643	79792104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
Isoform_22329_10	chr15	+	3710	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	10	-563	0	563	intron_retention	FALSE	canonical	3	1445	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	NA	False	NA	8	True	NA	NA	NA	79975544	79998205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_79975694_79994644
Isoform_22332_463	chr15	+	809	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	8	2	-2	-2	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975542	79997640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_22333_54	chr15	+	1357	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	25	-563	15	563	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	NA	False	NA	8	True	NA	NA	NA	79975559	79998205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_22334_8	chr15	+	959	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-142	2	-142	-2	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975392	79997640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
Isoform_22337_76	chr15	+	4170	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	7	3	7	-3	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGGCTGTGTCACTGT	NA	False	NA	17	True	AATAAA	-17	NA	79975551	80003699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
Isoform_22339_186	chr15	+	2941	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	19	4	-11	-4	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATGTCATCTTGTCTA	5012	False	NA	11	True	AATAGA	-19	NA	80017346	80045904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
Isoform_2234_57	chr10	-	2238	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1	-1	1	1	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358254	127352990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
Isoform_22341_5	chr15	+	4724	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-61	2	-61	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCGTGTGTGCTGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	80057860	80099718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80058040_80095173
Isoform_22343_11	chr15	+	5170	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	14	-21	1	-1	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2829	False	NA	15	True	AATAAA	-17	NA	80118294	80137571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_22345_40	chr15	+	5062	7	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	86.1677949635993	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2818	False	NA	15	True	AATAAA	-17	NA	80118283	80137571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80134550_80134569
Isoform_22348_11	chr15	+	3503	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	75	1570	0	-985	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGCCCTCCTGGTAG	2828	False	NA	NA	False	GATAAA	-17	NA	80118293	80136002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_22349_10	chr15	+	4467	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	64	617	2	-32	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCCCATCATCTCCTA	2817	False	NA	NA	False	AATAAA	-15	NA	80118282	80136955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_22352_5	chr15	+	4918	8	NNC	ENSMUSG00000022412.15	novel	4394	6	NA	NA	5	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	92.1123980664439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2848	False	NA	15	True	AATAAA	-17	NA	80118313	80137571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529_80134550_80134570_80135053_80135079
Isoform_22353_3	chr15	+	5555	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-4	2	intron_retention	FALSE	canonical	3	18	junction_1	87.9071479839192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACGTGTCTATGTGGTAT	2824	False	NA	18	True	AATAAA	-20	NA	80118289	80137574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_22354_4	chr15	+	5448	6	NIC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	21	junction_1	84.6678215144337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2829	False	NA	15	True	AATAAA	-17	NA	80118294	80137571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
Isoform_22355_3	chr15	+	2443	7	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	-5	-152	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	104.671576317971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTTGGGTGTTTTG	2855	False	NA	NA	False	NA	NA	NA	80118320	80134614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80134550_80134571
Isoform_22356_12	chr15	+	1475	4	FSM	ENSMUSG00000042406.9	ENSMUST00000229828.2	659	4	-39	-777	-38	-5	multi-exon	FALSE	canonical	3	33	junction_1	614.772044473939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACCTATGTGGGTTTTC	4107	False	NA	27	True	AATAAA	-15	NA	80139346	80141737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80139486_80139768_80139887_80140407_80140723_80140834
Isoform_22358_760	chr15	+	1407	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	313	5	-26	-5	multi-exon	FALSE	canonical	3	1292	junction_2	43	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACCTATGTGGGTTTTC	4458	False	NA	27	True	AATAAA	-15	NA	80139697	80141737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80139887_80140407_80140723_80140834
Isoform_22359_10	chr15	+	1669	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	51	5	50	-5	multi-exon	FALSE	canonical	3	1292	junction_2	43	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACCTATGTGGGTTTTC	4196	False	NA	27	True	AATAAA	-15	NA	80139435	80141737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80139887_80140407_80140723_80140834
Isoform_22371_4	chr15	+	2991	5	FSM	ENSMUSG00000022408.8	ENSMUST00000023044.7	2993	5	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGCAGTGTGGTGTGT	NA	False	NA	NA	False	ATTAAA	-28	NA	80556047	80584624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80556589_80574117_80574286_80574733_80574856_80576111_80576798_80583150
Isoform_22374_5	chr15	+	1255	5	FSM	ENSMUSG00000047888.11	ENSMUST00000226857.2	3240	5	-50	2035	-50	-2035	multi-exon	FALSE	canonical	3	10	junction_1	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGAAAATGCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	80682792	80763654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067
Isoform_22375_3	chr15	+	1330	5	FSM	ENSMUSG00000047888.11	ENSMUST00000226857.2	3240	5	-50	1960	-50	-1960	multi-exon	FALSE	canonical	3	10	junction_1	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGGAAACACTAACTC	NA	False	NA	NA	False	NA	NA	NA	80682792	80763729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067
Isoform_22377_263	chr15	+	2049	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	20	1642	-2	185	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTGTTTTATATTT	NA	False	NA	3	True	NA	NA	NA	80832710	80853505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
Isoform_22388_228	chr15	+	2747	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	34	216	20	185	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCCATCTTTTGTTGA	NA	False	NA	16	True	AATAAA	-16	NA	80861999	80896275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22389_22	chr15	+	2963	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	34	0	20	0	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTTTATTTTAA	NA	False	NA	7	True	AATACA	-17	NA	80861999	80896491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22392_5	chr15	+	2883	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	12	185	intron_retention	FALSE	canonical	3	124	junction_4	14.7961988361876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCCATCTTTTGTTGA	NA	False	NA	16	True	AATAAA	-16	NA	80861991	80896275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22393_6	chr15	+	2526	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	13	182	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	35.8427119509671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80861992	80896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22394_4	chr15	+	2817	22	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	20	182	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.2891522006204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80861999	80896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80862067_80886769_80886866_80887560_80887720_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22395_4	chr15	+	2829	22	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	12	182	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	35.4044336616545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80861991	80896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80862144_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
Isoform_22396_29	chr15	+	3433	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	13	2612	1	-18	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	81284351	81339071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
Isoform_22399_715	chr15	+	515	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	52	1108	4	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350548	81359462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_224_588	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
Isoform_22400_23	chr15	+	545	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	22	1108	22	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350518	81359462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_22402_43	chr15	+	1623	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	52	0	4	0	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGTCATTTTCACC	NA	False	NA	17	True	NA	NA	NA	81350548	81360570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_22405_39	chr15	+	478	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	48	125	48	-125	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350889	81359462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
Isoform_22409_974	chr15	+	3434	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	47	6	2	4	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81548136	81572510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
Isoform_22410_37	chr15	+	3470	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	11	6	11	4	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81548100	81572510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
Isoform_2242_1360	chr10	-	2052	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	59	178	1	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_22420_3	chr15	+	2531	17	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	10077	18	1727	5prime_fragment	TRUE	canonical	3	185	junction_12	29.7192593279173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTTTTGGGGGGGCGT	1966	False	NA	NA	False	TATAAA	-29	NA	81629275	81670384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082
Isoform_22421_29	chr15	+	4987	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	735	18	-735	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTGTGTGGTATCC	1966	False	NA	NA	False	NA	NA	NA	81629275	81679726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
Isoform_22422_29	chr15	+	5711	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	29	0	29	0	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1977	False	NA	4	True	AATAAA	-15	NA	81629286	81680461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
Isoform_22424_17	chr15	+	4252	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	-11	-162	-11	-3	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCAGTGGTCTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	81695603	81711061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
Isoform_22425_58	chr15	+	4187	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	56	-164	56	-1	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCAGTGGTCTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	81695670	81711063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
Isoform_2243_76	chr10	-	2295	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	11	-17	11	1	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358302	127352990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_22432_4046	chr15	+	2740	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	3	0	-3	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	4046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTCTGCCTGAGTGAT	NA	False	NA	16	True	AAAAAG	-13	NA	81756684	81799331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
Isoform_2245_178	chr10	-	2247	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	59	-17	1	1	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358254	127352990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
Isoform_22457_3	chr15	+	2445	4	FSM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	37	8	4	-1	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGAGCTGCCTGTCTT	5879	False	NA	NA	False	AATAAA	-20	NA	81820996	81835134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81821189_81830831_81831134_81832774_81832898_81833306
Isoform_22460_929	chr15	+	2088	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	26	0	26	0	multi-exon	FALSE	canonical	3	579	junction_9	64.3868516598433	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900595	81924286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
Isoform_22463_15	chr15	+	1997	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	26	-1	combination_of_known_splicesites	TRUE	canonical	3	28	junction_1	190.783291885872	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900595	81924284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
Isoform_22466_3	chr15	+	3996	31	NNC	ENSMUSG00000068117.11	novel	3956	31	NA	NA	114	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	1.59338912036228	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGTGTGCACTTTC	5094	False	NA	NA	False	AATAAA	-12	NA	81954311	82011013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_81954506_81956082_81956207_81957039_81957091_81959318_81959393_81961800_81961907_81964125_81964330_81966097_81966229_81967274_81967390_81969014_81969132_81970331_81970432_81970536_81970672_81973708_81973824_81975509_81975602_81976819_81976962_81978097_81978210_81980070_81980132_81982201_81982300_81985148_81985318_81985628_81985777_81987340_81987617_81991230_81991398_81993739_81993839_81996644_81996756_81997048_81997213_81999639_81999722_81999883_82000060_82007622_82007705_82008098_82008206_82009050_82009183_82009353_82009467_82010814
Isoform_22467_36	chr15	+	2035	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	9	2	4	1	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGTCTTTGGCTTCTT	NA	False	NA	23	True	AATAAA	-34	NA	82012131	82026402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
Isoform_22469_5	chr15	+	2920	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	-7	1220	-7	1138	5prime_fragment	FALSE	canonical	3	751	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAACAGAAACAGA	2231	False	NA	NA	False	NA	NA	NA	82031439	82056606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_82031692_82053938
Isoform_22470_58	chr15	+	1975	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	5	1	5	-1	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	2248	False	NA	NA	False	NA	NA	NA	82031456	82058094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
Isoform_22472_170	chr15	+	5001	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	75	1	5	-1	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGGCTGTGTGAGTCT	2248	False	NA	24	True	AATAAA	-20	NA	82031456	82089579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
Isoform_22473_179	chr15	+	4300	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	75	702	5	2	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCCTGTTCCTTCCCAC	2248	False	NA	19	True	AATAAA	-15	NA	82031456	82088878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
Isoform_22474_8	chr15	+	4372	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	0	705	0	-1	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTGTCCTGTTCCTTCC	2173	False	NA	16	True	AATAAA	-12	NA	82031381	82088875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
Isoform_22475_7	chr15	+	5025	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	51	1	-14	-1	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGGCTGTGTGAGTCT	2224	False	NA	24	True	AATAAA	-20	NA	82031432	82089579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
Isoform_22476_5	chr15	+	4026	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	3	-2020	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACTTCCTC	2246	False	NA	NA	False	NA	NA	NA	82031454	82086000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
Isoform_22489_10	chr15	+	563	3	FSM	ENSMUSG00000022452.17	ENSMUST00000161892.2	597	3	6	28	6	4	multi-exon	FALSE	canonical	3	88	junction_1	632.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTCGTCCCCATTTCT	NA	False	NA	34	True	AATAAA	-16	NA	82230220	82233264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82230422_82232100_82232242_82233043
Isoform_22491_122	chr15	+	570	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	110	25	-13	6	multi-exon	FALSE	canonical	3	1353	junction_2	125	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	36	True	AATAAA	-18	NA	82230264	82233266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82230471_82232100_82232242_82233043
Isoform_22493_4	chr15	+	692	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	-16	29	-16	2	multi-exon	FALSE	canonical	3	1353	junction_2	125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGGTCGTCCCCATTT	NA	False	NA	32	True	AATAAA	-14	NA	82230138	82233262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82230471_82232100_82232242_82233043
Isoform_22494_45	chr15	+	1370	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	2	-1	2	1	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGTGGCTGTTGTCA	NA	False	NA	18	True	AATAAA	-19	NA	82984406	83000876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_22495_66	chr15	+	1285	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	88	-2	-2	2	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTGGCTGTTGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	82984492	83000877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_22496_4	chr15	+	1492	13	NNC	ENSMUSG00000058586.13	novel	1371	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	28.8761724148706	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTCCAAGTGGCTGTT	NA	False	NA	14	True	AATAAA	-15	NA	82984407	83000872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989006_82989134_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_22497_6	chr15	+	1415	13	NNC	ENSMUSG00000058586.13	novel	1371	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	28.8761724148706	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTGGCTGTTGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	82984489	83000877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989006_82989134_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
Isoform_22498_7	chr15	+	938	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	0	4	0	-2	multi-exon	FALSE	canonical	3	12	junction_1	7.58287544405155	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCCCCTTAGGTCGTC	NA	False	NA	NA	False	AATAAA	-12	NA	83411062	83428831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
Isoform_22499_134	chr15	+	829	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	7	1	7	-1	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACTCTGTACTTAGTGG	NA	False	NA	20	True	AATAAA	-20	NA	83447799	83458403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
Isoform_22500_1596	chr15	+	1660	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	6	2963	6	-2963	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	1596	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076447	84098505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
Isoform_22511_3	chr15	+	2789	2	ISM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	19	41794	-4	-12	intron_retention	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84116262	84158095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_84116388_84155431
Isoform_22512_7	chr15	+	3768	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	15	1	-8	-1	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTGCTTTGATCAGAC	NA	False	NA	78	True	AATAAA	-15	NA	84116258	84199888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
Isoform_22514_15	chr15	+	1620	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	11	2153	11	-2153	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGAGTCTCAGAAGAT	NA	False	NA	19	True	AGTAAA	-22	NA	84116254	84197736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
Isoform_22515_15	chr15	+	2891	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	-274	2	-274	-2	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATGACTTAATGACAG	NA	False	NA	NA	False	AATAAA	-18	NA	84208646	84227141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
Isoform_22517_98	chr15	+	1851	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	NA	False	NA	4	True	AATAAA	-14	NA	84565181	84587873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_22519_94	chr15	+	1495	12	NIC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-4	1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	58.989143138924	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84604279	84656406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_84604309_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
Isoform_22520_22	chr15	+	1494	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	47	3	16	0	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84604299	84656405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
Isoform_22522_5	chr15	+	943	3	ISM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	33924	-1	-3070	1	3prime_fragment	FALSE	canonical	3	209	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84651016	84656406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_84651431_84654197_84654302_84655981
Isoform_22525_90	chr15	+	2422	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-22	2366	-22	590	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTTATTTTAAAA	NA	False	NA	40	True	ATTAAA	-43	NA	84807589	84824798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_22527_142	chr15	+	1810	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	1	2955	1	1	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTCTCCCTTCCTAAG	NA	False	NA	24	True	AATAAA	-18	NA	84807612	84824209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_22529_51	chr15	+	4781	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-22	7	-22	-7	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCGTTGGGTACTG	NA	False	NA	12	True	AATAAA	-12	NA	84807589	84827157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_22536_9	chr15	+	1956	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTCTCCCTTCCTAAG	NA	False	NA	24	True	AATAAA	-18	NA	84807589	84824209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
Isoform_22537_26	chr15	+	2677	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921322	84947030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_22538_5	chr15	+	2710	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921289	84947030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_22540_5	chr15	+	2556	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	67.2724330384562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921351	84947030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
Isoform_22541_5	chr15	+	2617	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	67.2724330384562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921290	84947030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
Isoform_22542_114	chr15	+	2455	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	62	1	26	-1	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGCTCAGTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	84921351	84947030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_22544_45	chr15	+	2509	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	0	9	0	-9	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCAACCCTGTGTGCT	NA	False	NA	-1	True	AATAAA	-6	NA	84921289	84947022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
Isoform_22545_567	chr15	+	2246	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	27	0	27	0	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	35	True	AATAAA	-25	NA	85090232	85136086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_22546_47	chr15	+	2262	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	5	6	5	-6	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATGCCTCTTGTACCT	NA	False	NA	29	True	AATAAA	-19	NA	85090210	85136080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_22547_12	chr15	+	2359	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	-92	6	-36	-6	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATGCCTCTTGTACCT	NA	False	NA	29	True	AATAAA	-19	NA	85090113	85136080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
Isoform_22549_204	chr15	+	2730	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	83	846	27	-846	multi-exon	FALSE	canonical	3	136	junction_16	137.738202761616	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATTGCAATTTTGTT	NA	False	NA	56	True	NA	NA	NA	85090232	85169890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
Isoform_22556_1012	chr15	+	1823	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	112	2	112	-2	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGACCCTTGATTG	NA	False	NA	23	True	AATAAA	-31	NA	85220557	85347411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_22557_677	chr15	+	1883	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	52	2	52	-2	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGACCCTTGATTG	NA	False	NA	23	True	AATAAA	-31	NA	85220497	85347411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_22558_130	chr15	+	1761	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	28	148	28	-148	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACGTTTTCTTTATTT	NA	False	NA	26	True	AGTAAA	-16	NA	85220473	85347265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_22559_57	chr15	+	2454	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	112	-629	112	629	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTAGAGGGCTTAC	NA	False	NA	19	True	AATAAA	-20	NA	85220557	85348042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_22560_26	chr15	+	2515	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	52	-630	52	630	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTAGAGGGCTTACC	NA	False	NA	20	True	AATAAA	-21	NA	85220497	85348043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
Isoform_22563_18	chr15	+	2664	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-13	1098	-13	-9	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716493	85741925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
Isoform_22565_572	chr15	+	2695	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-11	-43	-11	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7126	False	NA	30	True	ATTAAA	-41	NA	85743934	85760774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_22566_190	chr15	+	2727	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-43	-43	-43	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7094	False	NA	30	True	ATTAAA	-41	NA	85743902	85760774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_22569_34	chr15	+	2722	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-30	0	-30	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7308	False	NA	30	True	ATTAAA	-41	NA	85744116	85760774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_22570_15	chr15	+	2854	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-162	0	39	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7176	False	NA	30	True	ATTAAA	-41	NA	85743984	85760774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
Isoform_22571_18	chr15	+	1518	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	8	0	8	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85763528	85781593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
Isoform_22572_16	chr15	+	4162	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85942962	86021819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_22573_16	chr15	+	4116	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85943008	86021819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_22574_7	chr15	+	4122	19	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-64	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.3302130480553	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGAATCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	85943008	86021827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_85943161_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
Isoform_22575_78	chr15	+	3240	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-13	2	-13	-2	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTCTTTTTATTGCA	NA	False	NA	6	True	AATAAA	-15	NA	86098646	86382702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
Isoform_22577_33	chr15	+	5426	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-3	2	-3	-2	multi-exon	FALSE	canonical	3	163	junction_1	12	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	33	True	ATTAAA	-20	NA	88635859	88668717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88636006_88638962_88639137_88663611
Isoform_22582_55	chr15	+	1411	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-46	1	-46	-1	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACGTGTTGGTTTGTT	NA	False	NA	16	True	AATAAA	-25	NA	88703802	88710885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
Isoform_22583_135	chr15	+	1369	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-4	1	-4	-1	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACGTGTTGGTTTGTT	NA	False	NA	16	True	AATAAA	-25	NA	88703844	88710885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
Isoform_22588_322	chr15	+	2425	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	0	2	0	-2	multi-exon	TRUE	canonical	3	800	junction_3	47.4021096576935	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746388	88749927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
Isoform_22589_1614	chr15	+	2135	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	289	3	289	-3	multi-exon	FALSE	canonical	3	800	junction_3	47.4021096576935	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAACTTCTGTTTATTGG	NA	False	NA	27	True	ATTAAA	-17	NA	88746677	88749926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
Isoform_22604_7	chr15	+	2060	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-28	49199	-28	10878	5prime_fragment	TRUE	canonical	3	47	junction_4	7.60382678775509	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCGTGTTTGTATTTAA	2879	False	NA	NA	False	AAAAAG	-32	NA	88867083	88890152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
Isoform_22605_4	chr15	+	2463	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	0	43265	0	-11738	5prime_fragment	FALSE	canonical	3	36	junction_13	10.1817797586303	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTTCAAAGTATT	2907	False	NA	NA	False	AATAAA	-15	NA	88867111	88896086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
Isoform_22606_3	chr15	+	2469	14	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-4	-11734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.6192471411943	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTCAAAGTATTATTT	2903	False	NA	NA	False	AATAAA	-19	NA	88867107	88896090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880260_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
Isoform_22607_188	chr15	+	2375	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	59	5	0	1	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCGCTTTGTGAAGTG	NA	False	NA	4	True	AATAAA	-14	NA	88960274	88971275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_22610_15	chr15	+	2431	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	-34	-1	25	1	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCGCTTTGTGAAGTG	NA	False	NA	4	True	AATAAA	-14	NA	88960240	88971275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_22611_5	chr15	+	2973	10	FSM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	-96	-936	15	-2	multi-exon	FALSE	canonical	2	4	junction_1	29.3749704491577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTCCCGCTTTGTGAA	NA	False	NA	1	True	AATAAA	-11	NA	88960230	88971272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
Isoform_22612_48	chr15	+	2372	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	12	-1	12	1	multi-exon	TRUE	canonical	3	22	junction_2	3.38193731461717	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCACTGCCTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	88973298	88984544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
Isoform_22613_3	chr15	+	3601	8	NIC	ENSMUSG00000035757.18	novel	2383	9	NA	NA	12	1	intron_retention	FALSE	canonical	3	28	junction_7	2.1189138534559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCACTGCCTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	88973298	88984544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_88973869_88976906_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
Isoform_22614_27	chr15	+	1060	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	236	2	236	-2	multi-exon	FALSE	canonical	3	63	junction_1	15	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCACTCTCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	89207158	89208932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_22616_33	chr15	+	1035	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	261	2	261	-2	multi-exon	FALSE	canonical	3	63	junction_1	15	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCACTCTCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	89207183	89208932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_22617_6	chr15	+	1896	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	213	-811	213	811	multi-exon	FALSE	canonical	3	63	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGGAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89207135	89209745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_22618_6	chr15	+	1854	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	255	-811	255	811	multi-exon	FALSE	canonical	3	63	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGGAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89207177	89209745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89207337_89207479_89207604_89208174
Isoform_2262_11	chr10	-	1701	2	FSM	ENSMUSG00000040258.7	ENSMUST00000095266.3	1675	2	-22	-4	-22	4	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCCTGTGTTAAGACCTT	105	False	NA	NA	False	AATAAA	-14	NA	127370450	127361337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127362833_127370244
Isoform_22621_25	chr15	+	1935	20	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	1	17	combination_of_known_junctions	FALSE	canonical	1	145	junction_1	299.76465376263	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239966	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22622_105	chr15	+	1944	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	33	1246	-11	17	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22624_45	chr15	+	2025	20	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-13	17	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	320.159906376438	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239952	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22625_223	chr15	+	2020	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-11	1246	-11	17	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22626_18	chr15	+	3247	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	6	2	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGTTGATCCTCTGG	NA	False	NA	4	True	AATAAA	-14	NA	89239971	89257027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22629_166	chr15	+	2040	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	16	1246	-11	17	multi-exon	FALSE	canonical	1	166	junction_15	242.636453884124	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_2263_101	chr10	-	2593	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502590	127496786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_22632_909	chr15	+	2037	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1246	-11	17	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239954	89255783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22633_55	chr15	+	3282	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	16	1	-11	-1	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTGATCCTCTGGC	NA	False	NA	5	True	AATAAA	-15	NA	89239954	89257028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
Isoform_22638_135	chr15	+	3241	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	296	2021	296	-2021	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1554	False	NA	16	True	AATAAA	-16	NA	89338411	89346650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_22639_19	chr15	+	3388	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	149	2021	149	-2021	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1407	False	NA	16	True	AATAAA	-16	NA	89338264	89346650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_2264_25	chr10	-	2674	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-92	0	-92	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502671	127496786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_22640_5	chr15	+	3713	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	282	1563	282	-1563	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGGTGAC	1540	False	NA	NA	False	AAGAAA	-33	NA	89338397	89347108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_22641_3	chr15	+	3855	4	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	296	2964	intron_retention	FALSE	canonical	1	2	junction_3	37.6150088247881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	1554	False	NA	NA	False	AAAACA	-11	NA	89338411	89343825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_89338489_89339386_89341007_89341122_89342574_89343118
Isoform_22642_15	chr15	+	3340	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1094	2022	-35	-2022	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGCTGTTTTTAAGGT	2352	False	NA	15	True	AATAAA	-15	NA	89339209	89346649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_22643_3	chr15	+	3787	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1105	1564	-24	-1564	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGGTGA	2363	False	NA	NA	False	AAGAAA	-32	NA	89339220	89347107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_22644_7	chr15	+	3707	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-15	2952	-15	-2952	multi-exon	FALSE	canonical	3	65	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAAGGACGGTTGTTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	90108498	90114722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_90108812_90109859_90110058_90111526
Isoform_22645_7	chr15	+	2782	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	-24	-717	-24	717	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTCTTGATAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	91083672	91145814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
Isoform_22646_7	chr15	+	3540	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTTCACTT	NA	False	NA	NA	False	TATAAA	-22	NA	93296242	93389380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_22648_14	chr15	+	3907	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	4	398	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCGTCTCCTCTCGT	NA	False	NA	NA	False	AATAAA	-18	NA	93296284	93389789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_22649_3	chr15	+	1235	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	12	6	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATCTTAATTAGAATGT	NA	False	NA	NA	False	AATAAA	-17	NA	93296242	93387195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_22650_13	chr15	+	3744	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	13	-2603	13	401	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTCTCCTCTCGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	93296243	93389792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_22651_13	chr15	+	3330	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	15	-2191	15	1	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTTCACTT	NA	False	NA	NA	False	TATAAA	-22	NA	93296245	93389380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
Isoform_22654_17	chr15	+	3211	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGTTCACTT	NA	False	NA	NA	False	TATAAA	-22	NA	93296244	93389380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_22655_5	chr15	+	3602	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	-17	396	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAATTCGTCTCCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	93296260	93389787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
Isoform_22657_3	chr15	+	3541	6	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	12	397	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296242	93389788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
Isoform_22658_4	chr15	+	1126	7	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	10072	5180	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	8.1325819325039	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94451624	94460014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
Isoform_2266_7	chr10	-	2936	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-360	6	-360	-5	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGATCCATGGCCCCCTT	NA	False	NA	-7	True	AATAAA	-15	NA	127502939	127496792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_22660_79	chr15	+	2843	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-126	0	-108	0	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTGATGTAGGTT	NA	False	NA	4	True	AATAAA	-17	NA	94527004	94993979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
Isoform_22662_4	chr15	+	755	4	NNC	ENSMUSG00000063296.6	novel	2662	3	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	46.5044800709208	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	94526975	94615030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94614919
Isoform_22664_8	chr15	+	4976	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-38	-1789	11	-3	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95688734	95872629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
Isoform_22665_3	chr15	+	2064	3	ISM	ENSMUSG00000064210.8	ENSMUST00000227151.2	4134	21	-94	77651	-4	1309	5prime_fragment	FALSE	canonical	3	75	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	95688719	95794056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_95688938_95762105_95762189_95792293
Isoform_22666_21	chr15	+	4930	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-4	1	-4	-1	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95688719	95872631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
Isoform_22667_4	chr15	+	5647	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-4	-716	-4	716	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGCTGTGGCCTAACG	NA	False	NA	4	True	AATAAA	-13	NA	95688719	95873348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
Isoform_22669_9	chr15	+	5810	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-19	2716	-19	-1325	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATCTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	96185434	96300157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
Isoform_22671_136	chr15	+	2509	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	26	1	26	-1	multi-exon	TRUE	canonical	3	145	junction_2	1	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTTTTTCAC	NA	False	NA	16	True	AATAAA	-17	NA	97682261	97690572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_97682498_97687783_97687952_97688467
Isoform_22674_36	chr15	+	1433	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	23	-1	-4	0	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7703	False	NA	11	True	AATAAA	-17	NA	97862132	97868156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_22675_22	chr15	+	1602	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	27	-6	0	6	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACTGCCTGTAT	7708	False	NA	17	True	AATAAA	-23	NA	97862137	97868162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_22676_10	chr15	+	1936	7	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	125	junction_4	17.9884222024427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCACTGTCTCTGACT	7702	False	NA	9	True	AATAAA	-15	NA	97862131	97868154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
Isoform_22677_8	chr15	+	2895	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	-10	-6	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1586	False	NA	7	True	AATAAA	-19	NA	98006336	98030328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_22678_54	chr15	+	2799	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	86	-6	86	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1682	False	NA	7	True	AATAAA	-19	NA	98006432	98030328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_2268_5	chr10	-	2474	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-165	2	-87	-2	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCATGGCCCCCTTCCC	NA	False	NA	-4	True	AATAAA	-18	NA	127502666	127496789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_22680_22	chr15	+	2442	18	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	12593	-6	12593	0	3prime_fragment	FALSE	canonical	3	75	junction_7	12.0037479729426	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018939	98030328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_22681_12	chr15	+	2508	13	FSM	ENSMUSG00000003352.15	ENSMUST00000109150.9	2513	13	3	2	-2	-2	multi-exon	FALSE	canonical	3	18	junction_1	9.06879570591132	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	NA	False	NA	3	True	AATAAA	-14	NA	98530259	98542408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_22682_33	chr15	+	2819	13	FSM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	-342	0	-4	0	multi-exon	FALSE	canonical	3	16	junction_1	9.50548087508816	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	40	False	NA	5	True	AATAAA	-16	NA	98532643	98542410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_22684_6	chr15	+	2891	14	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	30	-2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	15.6371579917571	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	74	False	NA	3	True	AATAAA	-14	NA	98532677	98542408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
Isoform_22686_1482	chr15	+	1553	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	-1	0	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98928201	98935992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_22689_33	chr15	+	1582	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	401	-1	-29	1	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCATCTGGTTCATAG	NA	False	NA	16	True	AATAAA	-23	NA	98928172	98935992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
Isoform_2269_44	chr10	-	2398	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-86	-1	-8	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502587	127496786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
Isoform_22693_35	chr15	+	1767	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	-7	-3	0	-1	multi-exon	FALSE	canonical	3	16	junction_2	6.35290287978653	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTGGTCTGAGG	-8	True	NA	9	True	AATAAA	-21	NA	98953054	98956857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_22694_7	chr15	+	1863	8	FSM	ENSMUSG00000023484.15	ENSMUST00000047104.15	1863	8	-1	1	0	-1	multi-exon	FALSE	canonical	3	16	junction_2	6.60859057498307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTGGTCTGAGG	-8	True	NA	9	True	AATAAA	-21	NA	98953054	98956857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_22695_6	chr15	+	1377	8	ISM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	716	4	-73	-4	3prime_fragment	FALSE	canonical	3	16	junction_1	6.19743198956682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCCTTACTGTGTTGG	21	False	NA	2	True	AATAAA	-14	NA	98953777	98956850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
Isoform_22696_3	chr15	+	2543	12	ISM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	423	1	11	1	intron_retention	FALSE	canonical	3	25	junction_1	18.9173932822427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972878	98981289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006
Isoform_22697_67	chr15	+	2228	14	FSM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	410	1	-2	1	multi-exon	FALSE	canonical	3	25	junction_1	17.6655315775427	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972865	98981289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_22698_5	chr15	+	2606	12	ISM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	-18	-5	-18	1	intron_retention	FALSE	canonical	3	68	junction_1	8.70071717382211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972840	98981289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006
Isoform_22699_3	chr15	+	2385	13	ISM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	-2	-3	-2	-1	intron_retention	FALSE	canonical	3	68	junction_1	9.24962461700774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGGGCAGCCAGTGCTG	NA	False	NA	11	True	AATAAA	-20	NA	98972856	98981287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789
Isoform_227_606	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	2	497	junction_2	204	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_1485_7552_7809_10553
Isoform_2270_10	chr10	-	5276	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-158	-3637	-158	2088	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012506	127965338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
Isoform_22700_77	chr15	+	2244	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	16	-5	7	1	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972874	98981289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_22701_5	chr15	+	2458	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	68	junction_1	8.33166649996666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGGGCAGCCAGTGCTG	NA	False	NA	11	True	AATAAA	-20	NA	98972861	98981287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980984_98981108
Isoform_22702_6	chr15	+	974	2	ISM	ENSMUSG00000032783.10	ENSMUST00000230311.2	819	3	-52	1387	0	-6	5prime_fragment	FALSE	canonical	3	90	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATCTAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	98972858	98973941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98973380_98973488
Isoform_22703_3	chr15	+	2521	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	0	3	intron_retention	FALSE	canonical	3	68	junction_9	8.01387685344754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCAGTGCTGTTGGTC	NA	False	NA	17	True	AATAAA	-26	NA	98972858	98981293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
Isoform_22704_13	chr15	+	1541	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	21	2	21	-2	multi-exon	FALSE	canonical	3	51	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCACGGAATCCTAGCC	4044	False	NA	1	True	AATAAA	-19	NA	98997313	99002616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_98997482_98998703_98999657_99002196
Isoform_22707_5	chr15	+	2938	13	NIC	ENSMUSG00000051934.6	novel	1275	8	NA	NA	60	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.953795362845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTTAGCGCCGTCTCT	NA	False	NA	16	True	AATAAA	-21	NA	99023861	99111094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99024038_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_22708_167	chr15	+	3083	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	13	0	13	0	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024449	99111096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_22712_3	chr15	+	3043	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	106.740435923585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTAGCGCCGTCTC	NA	False	NA	15	True	AATAAA	-20	NA	99024436	99111093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_22713_11	chr15	+	2824	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024411	99111096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
Isoform_22718_22	chr15	+	3170	26	NIC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	106	junction_21	27.793351723029	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99193121	99214895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22719_16	chr15	+	3332	26	NIC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	106	junction_21	27.793351723029	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192961	99214897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22720_6	chr15	+	3172	26	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_25	36.3090291800814	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193117	99214897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214345
Isoform_22722_6	chr15	+	3188	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	41.8124192076947	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTTGTCCTCTTCA	NA	False	NA	41	True	TTTAAA	-22	NA	99193116	99214896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22727_43	chr15	+	3160	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	102	junction_21	28.1893596947501	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99193131	99214898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22728_24	chr15	+	3362	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-38	-1	combination_of_known_junctions	TRUE	canonical	3	102	junction_21	28.1893596947501	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192929	99214898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22730_6	chr15	+	3337	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	42.0526527106198	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192965	99214897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22732_7	chr15	+	2380	19	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-23	3987	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_18	45.4269526238703	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGGAACTCTAATATCC	NA	False	NA	NA	False	NA	NA	NA	99192944	99208945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
Isoform_2274_71	chr10	-	1518	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-161	124	-161	93	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTTCTTGCTTTGT	NA	False	NA	-4	True	AAAAAG	-19	NA	128012509	127969099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
Isoform_22741_6	chr15	+	3247	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.2925061769629	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192962	99214897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
Isoform_22750_61	chr15	+	2562	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	-1414	0	-1	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290866	99307929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_22756_1714	chr15	+	2347	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	104	1	0	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290866	99307929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_22757_25	chr15	+	2407	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	44	1	44	-1	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290806	99307929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_22764_35	chr15	+	2434	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	22	-1512	22	-2	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99291121	99307928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
Isoform_2277_8	chr10	-	1700	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	16	93	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	102.033507901541	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTTCTTGCTTTGT	NA	False	NA	-4	True	AAAAAG	-19	NA	128016150	127969099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128015661_128015715_128015817
Isoform_22771_3	chr15	+	3904	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	212	-2	212	0	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCAGTGTTGGTTTTCTG	NA	False	NA	4	True	AATAAA	-17	NA	99568460	99599011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
Isoform_22778_157	chr15	+	3327	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	-18	-2	-18	2	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCTGTCTGGAGGGGT	7523	False	NA	28	True	AATAAA	-19	NA	99599991	99611874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
Isoform_2278_10	chr10	-	1342	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-197	94	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_13	80.9962377678394	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTTCTTGCTTTGTA	NA	False	NA	-3	True	AAAAAG	-20	NA	128012545	127969098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
Isoform_22782_372	chr15	+	606	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	0	1484	0	478	multi-exon	FALSE	canonical	3	1440	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623527	99625929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99623730_99625525
Isoform_22783_39	chr15	+	645	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	28	1417	-2	545	multi-exon	FALSE	canonical	3	1440	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGGTCTCTCTCTTT	NA	False	NA	26	True	AGTAAA	-33	NA	99623555	99625996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99623730_99625525
Isoform_22788_10	chr15	+	2269	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-15	225	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAAAAACAAAGCCTACA	NA	False	NA	NA	False	NA	NA	NA	99870734	99910049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
Isoform_2279_90	chr10	-	1576	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	4	3	4	-3	multi-exon	FALSE	canonical	3	299	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTCTGTCTATAAAAT	NA	False	NA	-3	True	AATAAA	-38	NA	128047672	128045779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128047261_128047577
Isoform_22790_4	chr15	+	2283	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	57	4190	0	225	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAAAAACAAAGCCTACA	NA	False	NA	NA	False	NA	NA	NA	99870717	99910049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
Isoform_22791_5	chr15	+	358	3	ISM	ENSMUSG00000023026.17	ENSMUST00000100203.10	8914	38	-21	87553	-21	-36244	5prime_fragment	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAACCAAACTC	4836	False	NA	NA	False	NA	NA	NA	99936523	100029801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_99936791_100013725_100013798_100029782
Isoform_22792_11	chr15	+	2206	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	69	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCGGAATGCAAAACA	NA	False	NA	16	True	ATTAAA	-19	NA	100125820	100159128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
Isoform_22793_53	chr15	+	2336	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	32	-3	-20	3	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCGGAATGCAAAACA	NA	False	NA	16	True	ATTAAA	-19	NA	100125731	100159128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
Isoform_22794_19	chr15	+	2401	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	-33	-3	-33	3	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCGGAATGCAAAACA	NA	False	NA	16	True	ATTAAA	-19	NA	100125666	100159128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
Isoform_22796_3	chr15	+	1453	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	21	272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAAAGCGTTACTAA	NA	False	NA	5	True	AATAAA	-13	NA	100125720	100158276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_22797_3	chr15	+	2209	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-16	-130	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGGTCAGTACACCA	NA	False	NA	NA	False	TATAAA	-17	NA	100125683	100158995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158220
Isoform_22798_63	chr15	+	1900	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	42	4	14	-4	multi-exon	FALSE	canonical	3	19	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTGGCTGCATTTG	580	False	NA	8	True	AATAAA	-43	NA	100202683	100212232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100203226_100210874
Isoform_22800_15	chr15	+	2454	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-148	-1084	-64	-4	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2271	False	NA	22	True	AGTAAA	-11	NA	100366839	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22801_41	chr15	+	2411	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-105	-1084	-21	-4	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2314	False	NA	22	True	AGTAAA	-11	NA	100366882	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22803_12	chr15	+	2638	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-332	-1084	-248	-4	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2087	False	NA	22	True	AGTAAA	-11	NA	100366655	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22806_38	chr15	+	2405	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	92	5	0	-4	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2427	False	NA	22	True	AGTAAA	-11	NA	100366995	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22808_9	chr15	+	2505	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	-8	5	-8	-4	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2327	False	NA	22	True	AGTAAA	-11	NA	100366895	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22809_18	chr15	+	2844	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2427	False	NA	22	True	AGTAAA	-11	NA	100366995	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_2281_10	chr10	-	1371	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-12	1	-12	-1	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGGTCTAAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128133965	128132008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
Isoform_22810_4	chr15	+	3204	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-268	-4	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2067	False	NA	22	True	AGTAAA	-11	NA	100366635	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22811_7	chr15	+	2952	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	2319	False	NA	22	True	AGTAAA	-11	NA	100366887	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22812_3	chr15	+	2211	7	ISM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	2548	5	-836	-4	3prime_fragment	FALSE	canonical	3	98	junction_1	7.80313327381308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTCTGGGAATTAC	4883	False	NA	22	True	AGTAAA	-11	NA	100369451	100377040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
Isoform_22814_5	chr15	+	1549	3	ISM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	277	1506	277	-193	5prime_fragment	FALSE	canonical	0	0	junction_1	674.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	100513506	100517136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_100513606_100514793_100514913_100515805
Isoform_22815_314	chr15	+	1851	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	282	2	282	-2	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCAGCATTCTTTACTT	NA	False	NA	16	True	AATAAA	-23	NA	100513511	100518640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
Isoform_22816_30	chr15	+	1894	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	239	2	239	-2	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCAGCATTCTTTACTT	NA	False	NA	16	True	AATAAA	-23	NA	100513468	100518640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
Isoform_22818_6	chr15	+	2039	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	90	6	90	-6	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACGCCAGCATTCTTT	NA	False	NA	12	True	AATAAA	-43	NA	100513319	100518636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
Isoform_22819_11	chr15	+	1984	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGCCAGCATTCTTTAC	NA	False	NA	14	True	AATAAA	-45	NA	100513974	100518638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
Isoform_2282_7	chr10	-	1428	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-71	3	-71	-3	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTGGGTCTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	128134024	128132010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
Isoform_22821_10	chr15	+	3741	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	17	8032	17	1	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	NA	False	NA	12	True	ATTAAA	-20	NA	100659644	100713817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
Isoform_22822_3	chr15	+	1425	2	ISM	ENSMUSG00000023033.15	ENSMUST00000108908.6	7030	27	-23	104055	-16	1228	5prime_fragment	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTAACACGCCTG	6953	False	NA	NA	False	AATAGA	-15	NA	100768809	100835436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_100768950_100834151
Isoform_22824_91	chr15	+	4360	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	55	3	55	-3	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTGATCCCGTCTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101072002	101111562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_22826_3	chr15	+	3182	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	-18	1254	-18	-1254	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGCACATAGTTCAGT	NA	False	NA	NA	False	AAGAAA	-37	NA	101071929	101110311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
Isoform_2283_16	chr10	-	1300	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	10	-3	10	3	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	7255	False	NA	0	True	AATAAA	-15	NA	128204550	128198965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
Isoform_22830_5	chr15	+	2461	7	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	37	0	37	0	intron_retention	FALSE	canonical	3	148	junction_1	34.0069437353935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6278	False	NA	12	True	TATAAA	-21	NA	101122105	101130637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865
Isoform_22832_178	chr15	+	1993	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	37	3	37	-3	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6278	False	NA	9	True	TATAAA	-18	NA	101122105	101130634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_22833_125	chr15	+	2040	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6234	False	NA	12	True	TATAAA	-21	NA	101122061	101130637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_22834_4	chr15	+	3302	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	37	-1306	37	1306	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAAGGG	6278	False	NA	NA	False	NA	NA	NA	101122105	101131943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_22837_5	chr15	+	2093	7	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	37	0	intron_retention	FALSE	canonical	3	148	junction_1	34.2782730020052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6278	False	NA	12	True	TATAAA	-21	NA	101122105	101130637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
Isoform_22838_123	chr15	+	2571	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-22	4	-22	-4	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGAGTCTTTTTTTCT	495	False	NA	15	True	AATAAA	-17	NA	101152127	101172672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22839_3	chr15	+	2334	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-55	274	-55	-274	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACTCTGTTGTAAATAA	462	False	NA	NA	False	GATAAA	-15	NA	101152094	101172402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22840_82	chr15	+	2473	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	2	2	2	-2	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	17	True	AATAAA	-19	NA	101164728	101172674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22841_43	chr15	+	2506	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-31	2	-31	-2	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	17	True	AATAAA	-19	NA	101164695	101172674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22842_4	chr15	+	2645	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-171	3	-171	-3	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTCTTTTTTTCTG	NA	False	NA	16	True	AATAAA	-18	NA	101164555	101172673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22843_13	chr15	+	2590	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-117	4	-117	-4	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGAGTCTTTTTTTCT	NA	False	NA	15	True	AATAAA	-17	NA	101164609	101172672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_22844_288	chr15	+	1241	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	29	0	29	0	multi-exon	FALSE	canonical	3	465	junction_2	16.5	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	8059	False	NA	31	True	AATAAA	-23	NA	101182181	101188826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101182427_101184813_101185132_101188148
Isoform_22845_16	chr15	+	1561	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	24	2509	-23	15	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	21	True	AATAAA	-28	NA	101310306	101325685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_22846_3	chr15	+	1607	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-35	2522	-35	2	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCATCGGCTAGCTAG	NA	False	NA	8	True	AATAAA	-15	NA	101310247	101325672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_22847_30	chr15	+	1384	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	48	5	48	-5	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCACTTTGTGTCTTCCTT	NA	False	NA	7	True	AATAAA	-19	NA	101936662	101940457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
Isoform_2285_80	chr10	-	1420	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	17	-3	1	3	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	6956	False	NA	0	True	AATAAA	-15	NA	128204849	128198965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
Isoform_22850_80	chr15	+	3684	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	168	2	77	-2	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101982375	102005606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
Isoform_22852_19	chr15	+	3714	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	133	7	42	-7	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATGGTTAATGTTGC	NA	False	NA	42	True	AATAAA	-12	NA	101982340	102005601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
Isoform_22855_8	chr15	+	3874	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-27	7	-27	-7	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATGGTTAATGTTGC	NA	False	NA	42	True	AATAAA	-12	NA	101982180	102005601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
Isoform_2286_8	chr10	-	1600	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	-166	0	-166	0	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCATTTTTTGAG	6773	False	NA	-3	True	AATAAA	-12	NA	128205032	128198968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
Isoform_22866_7	chr15	+	2263	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	-65	10	-65	-10	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	102058895	102071894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_22868_3	chr15	+	2114	14	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	476	11	-114	-11	3prime_fragment	FALSE	canonical	3	11	junction_9	3.75113395084203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATAAAATAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	102059436	102071893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_22869_3	chr15	+	1812	11	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	-114	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.07371385562409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATAAAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	102059436	102071896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102059597_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
Isoform_2287_6	chr10	-	1476	5	FSM	ENSMUSG00000039914.7	ENSMUST00000043211.7	1421	5	-52	-3	-9	3	multi-exon	FALSE	canonical	3	7	junction_3	37.9629753839185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCATTTTTTGAGGGG	6930	False	NA	0	True	AATAAA	-15	NA	128204875	128198965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128199661_128200273_128200376_128200891_128201115_128203875_128204023_128204566
Isoform_22870_3	chr15	+	4056	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.0686520039925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	920	False	NA	20	True	AATAAA	-21	NA	102112096	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22871_6	chr15	+	4017	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.2157658862373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTCCATGTCCTCTTT	918	False	NA	15	True	AATAAA	-16	NA	102112094	102124031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22874_5	chr15	+	4125	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-177	-2959	-134	1	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	772	False	NA	18	True	AATAAA	-19	NA	102111948	102124034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22875_5	chr15	+	3991	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-43	-2959	0	1	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	906	False	NA	18	True	AATAAA	-19	NA	102112082	102124034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22877_4	chr15	+	3951	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.6824694190945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	917	False	NA	25	True	AATAAA	-26	NA	102112093	102124041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22878_4	chr15	+	3952	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.6824694190945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTCCATGTCCTCTTT	906	False	NA	15	True	AATAAA	-16	NA	102112082	102124031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_2288_3	chr10	-	1399	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	-28	0	-20	0	multi-exon	FALSE	canonical	3	274	junction_1	33.0732520324204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245625	128237263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
Isoform_22880_15	chr15	+	4433	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-157	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	749	False	NA	23	True	AATAAA	-24	NA	102111925	102124039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22881_28	chr15	+	4275	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	904	False	NA	20	True	AATAAA	-21	NA	102112080	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22882_14	chr15	+	4279	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	49.2457394821406	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	904	False	NA	20	True	AATAAA	-21	NA	102112080	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_22885_13	chr15	+	4429	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-149	-1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	49.2457394821406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	757	False	NA	23	True	AATAAA	-24	NA	102111933	102124039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_22886_6	chr15	+	4402	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	-160	-1	-160	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	746	False	NA	25	True	AATAAA	-26	NA	102111922	102124041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22888_21	chr15	+	4216	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	21	4	10	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	927	False	NA	20	True	AATAAA	-21	NA	102112103	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22889_8	chr15	+	4241	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	51.2297745058317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	906	False	NA	20	True	AATAAA	-21	NA	102112082	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_22891_15	chr15	+	4191	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	914	False	NA	23	True	AATAAA	-24	NA	102112090	102124039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22893_8	chr15	+	4387	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-191	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	715	False	NA	20	True	AATAAA	-21	NA	102111891	102124036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22895_7	chr15	+	4194	7	NNC	ENSMUSG00000046897.18	novel	989	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_4	60.8632346604527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	917	False	NA	25	True	AATAAA	-26	NA	102112093	102124041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
Isoform_22896_5	chr15	+	4291	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCATGTCCTCTTTGA	772	False	NA	17	True	AATAAA	-18	NA	102111948	102124033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22897_10	chr15	+	4139	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTCCTCTTTGAGAAG	928	False	NA	21	True	AATAAA	-22	NA	102112104	102124037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22898_3	chr15	+	4572	6	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	333	2	intron_retention	FALSE	canonical	0	0	junction_3	68.3900577569576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCCTCTTTGAGAAGA	1300	False	NA	22	True	AATAAA	-23	NA	102112476	102124038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
Isoform_22899_3	chr15	+	2137	2	NNC	ENSMUSG00000097050.2	novel	2192	2	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCTCTGGTAAGGTT	1690	False	NA	NA	False	AATAAA	-10	NA	102179009	102182559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102179766_102181178
Isoform_2290_54	chr10	-	1106	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	24	0	24	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245719	128237263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
Isoform_22901_129	chr15	+	1750	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	0	4	0	-4	multi-exon	FALSE	canonical	3	355	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTCCTCTCCTGTA	NA	False	NA	23	True	AATAAA	-19	NA	102187888	102190185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102188065_102188611
Isoform_22902_3	chr15	+	6688	31	FSM	ENSMUSG00000058290.5	ENSMUST00000229050.2	6635	31	-9	-44	-5	-1	multi-exon	TRUE	canonical	3	92	junction_1	63.2712063703195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	382	False	NA	16	True	AATAAA	-16	NA	102204723	102232791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_22903_3	chr15	+	789	5	ISM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	26633	0	211	0	3prime_fragment	FALSE	canonical	3	382	junction_2	17.0733710789639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	6618	False	NA	17	True	AATAAA	-17	NA	102231333	102232792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
Isoform_22905_247	chr15	+	629	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	48	385	-4	2	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTGGTCTATTCTTG	382	False	NA	28	True	AATAAA	-16	NA	102234598	102239923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
Isoform_22907_5	chr15	+	596	5	FSM	ENSMUSG00000001289.13	ENSMUST00000001335.7	570	5	-25	-1	-4	1	multi-exon	FALSE	canonical	3	11	junction_2	370.883741892254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGGTGGTCTATTCTT	382	False	NA	27	True	AATAAA	-15	NA	102234598	102239922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102234696_102234867_102234971_102236956_102237032_102237146_102237253_102239707
Isoform_22908_5	chr15	+	929	5	FSM	ENSMUSG00000001289.13	ENSMUST00000168805.8	827	5	-22	-80	-2	2	multi-exon	FALSE	canonical	3	835	junction_1	33.0709464636257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTGGTCTATTCTTG	364	False	NA	28	True	AATAAA	-16	NA	102234580	102239923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102234696_102234867_102235285_102236956_102237032_102237146_102237253_102239707
Isoform_22909_332	chr15	+	1180	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	10	290	-1	-2	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGTCCCTGATC	5937	False	NA	14	True	AATAAA	-15	NA	102240153	102246284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
Isoform_22910_8	chr15	+	1463	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	9	8	-2	-8	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAACCACCCTAGGAG	5936	False	NA	NA	False	NA	NA	NA	102240152	102246566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
Isoform_22913_25	chr15	+	2625	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-99	5228	-52	-1503	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGATGGGATTGT	NA	False	NA	13	True	NA	NA	NA	102314715	102339611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
Isoform_22915_11	chr15	+	1968	11	FSM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	-23	-7	-23	4	multi-exon	FALSE	canonical	1	3	junction_1	59.5990771740637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102353778	102363072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102353958_102354239_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22916_5	chr15	+	1439	8	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	1315	-6	1234	3	3prime_fragment	FALSE	canonical	2	5	junction_1	62.2893183754122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAATGTGTTTTTACT	NA	False	NA	19	True	AATAAA	-19	NA	102355116	102363071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22917_6	chr15	+	1173	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6607	-7	-185	4	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102360408	102363072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22918_12	chr15	+	1063	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6711	-1	-81	1	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360512	102363066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22919_5	chr15	+	1237	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6537	-1	-255	1	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360338	102363066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_2292_22	chr10	-	688	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	3	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	1160.32375750142	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
Isoform_22921_73	chr15	+	841	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	7062	-7	106	4	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGTGTTTTTACTT	NA	False	NA	20	True	AATAAA	-20	NA	102360863	102363072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22922_24	chr15	+	929	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6968	-1	12	1	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360769	102363066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
Isoform_22923_7	chr15	+	498	2	ISM	ENSMUSG00000023047.12	ENSMUST00000162893.2	611	3	322	-86	158	1	3prime_fragment	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTCATCAATGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	102360915	102363066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102360995_102362647
Isoform_22924_67	chr15	+	1179	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	39	6	12	-6	multi-exon	FALSE	canonical	3	129	junction_1	259.364969685576	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2417	False	NA	34	True	AATAAA	-37	NA	102367648	102371235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
Isoform_22925_132	chr15	+	1043	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	12	0	12	0	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACCTGTGCCATTACC	2417	False	NA	16	True	AATAAA	-19	NA	102367648	102371217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
Isoform_22928_82	chr15	+	1046	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	-26	0	-4	multi-exon	FALSE	canonical	3	623	junction_2	60	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGGGCTAGTTTTGTT	3286	False	NA	36	True	AATAAA	-39	NA	102368517	102371237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102368582_102368804_102369155_102370605
Isoform_22929_3	chr15	+	2121	2	NIC	ENSMUSG00000023048.14	novel	1020	3	NA	NA	12	1	intron_retention	FALSE	canonical	3	623	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGCCATTACCTTG	2417	False	NA	19	True	AATAAA	-22	NA	102367648	102371220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102369155_102370605
Isoform_22930_13	chr15	+	1820	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	26	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	164.508730616279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGGATGCCACAGTGA	2010	False	NA	31	True	ATTAAA	-31	NA	102378974	102407342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22931_3	chr15	+	1486	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-6	26	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	171.496855940956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGGATGCCACAGTGA	2248	False	NA	31	True	ATTAAA	-31	NA	102379212	102407342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22932_20	chr15	+	1830	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	-13	1135	-2	45	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	2007	False	NA	50	True	AATAGA	-18	NA	102378971	102407361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22935_10	chr15	+	1785	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	148.572184064013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2010	False	NA	11	True	ATTAAA	-11	NA	102378974	102407322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22936_16	chr15	+	1693	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	-113	-4	1	4	multi-exon	FALSE	canonical	3	59	junction_1	146.176678378513	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTTTTTCTTTGTGAA	2010	False	NA	9	True	ATTAAA	-9	NA	102378974	102407320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22937_3	chr15	+	1697	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-2	8	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	151.135778916308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2007	False	NA	13	True	ATTAAA	-13	NA	102378971	102407324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22938_3	chr15	+	1665	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-25	46	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	151.135778916308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2077	False	NA	51	True	AATAGA	-19	NA	102379041	102407362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22939_13	chr15	+	1817	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	47	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	165.568162176581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTGGGTGTTGTTCCTG	2010	False	NA	52	True	AATAGA	-20	NA	102378974	102407363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22940_3	chr15	+	1813	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	46	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	168.78329603491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTGGGTGTTGTTCCT	2010	False	NA	51	True	AATAGA	-19	NA	102378974	102407362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22941_5	chr15	+	1533	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-26	47	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTGGGTGTTGTTCCTG	2201	False	NA	52	True	AATAGA	-20	NA	102379165	102407363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22942_6	chr15	+	1683	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	1	6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2010	False	NA	11	True	ATTAAA	-11	NA	102378974	102407322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22943_8	chr15	+	1808	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	1	50	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	145.271894974175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTGTTCCTGTCT	2010	False	NA	55	True	AATAGA	-23	NA	102378974	102407366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22946_6	chr15	+	1787	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	31	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	149.78596975249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCCACAGTGACTTAC	2009	False	NA	36	True	ATTAAA	-36	NA	102378973	102407347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
Isoform_22947_10	chr15	+	1671	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	3	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	147.555385248985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2012	False	NA	13	True	ATTAAA	-13	NA	102378976	102407324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
Isoform_22953_15	chr15	+	1697	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-41	1	-9	1	intron_retention	FALSE	canonical	3	312	junction_3	28	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426852	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
Isoform_22954_191	chr15	+	1526	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-6	3	-2	-1	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCCTTGTTCTTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102426887	102432108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22955_24	chr15	+	1492	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-42	73	-10	1	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTGCTCTCTCTGGCC	NA	False	NA	NA	False	AATAAA	-20	NA	102426851	102432038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22956_13	chr15	+	1655	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-133	1	-31	1	multi-exon	TRUE	canonical	3	312	junction_3	28.7706447616316	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426760	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22959_11	chr15	+	1527	9	FSM	ENSMUSG00000023051.12	ENSMUST00000154948.8	951	9	-123	-453	-5	-2	multi-exon	FALSE	canonical	3	32	junction_3	117.676463237132	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCCTTGTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	102426868	102432107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22961_10	chr15	+	2240	7	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	365	junction_3	15.4209453522005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426852	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427038_102427556_102427727_102428909_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
Isoform_22964_16	chr15	+	1444	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426868	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22965_4	chr15	+	1393	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	124.392072718088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102426852	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427038_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22967_53	chr15	+	1450	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102427207	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22969_4	chr15	+	2161	7	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	13	1	intron_retention	FALSE	canonical	3	98	junction_1	107.370076526625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTTGTTCTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	102427173	102432110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427280_102427556_102427727_102428909_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
Isoform_2297_1021	chr10	-	643	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	21	1	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
Isoform_22970_5	chr15	+	1391	8	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	148.535435200507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCCTTGTTCTTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102427161	102432108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102427280_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
Isoform_22972_9	chr15	+	2468	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	47	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGCTTGGGATCCTT	NA	False	NA	17	True	AATAAA	-25	NA	102829530	102837249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102830353_102835603
Isoform_22975_3	chr15	+	3230	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	49	-2248	49	2248	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTGAGAACCATTT	NA	False	NA	23	True	ATTAAA	-20	NA	102845240	102849292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_102845892_102846713
Isoform_22976_4	chr15	+	1871	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	46	1	11	-1	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAATGACAACTGTAT	NA	False	NA	-2	True	AATAAA	-16	NA	103148904	103153381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
Isoform_22977_10	chr15	+	1754	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-16	-1	6	1	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATGACAACTGTATGG	NA	False	NA	0	True	AATAAA	-18	NA	103148864	103153383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
Isoform_22981_13	chr15	+	1187	6	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	1752	0	1712	0	3prime_fragment	FALSE	canonical	3	9291	junction_3	1435.77722505965	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103150632	103153382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
Isoform_22983_5	chr15	+	1116	5	ISM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	2260	-4	2198	4	3prime_fragment	FALSE	canonical	3	2223	junction_1	5430.92802843124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAACTGTATGGATT	NA	False	NA	3	True	AATAAA	-21	NA	103151118	103153386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
Isoform_22984_15	chr15	+	1002	4	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	2190	-1	2150	1	3prime_fragment	FALSE	canonical	3	9291	junction_1	1808.10514689335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATGACAACTGTATGG	NA	False	NA	0	True	AATAAA	-18	NA	103151070	103153383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_103151146_103152051_103152208_103152385_103152456_103152682
Isoform_22987_15	chr15	+	929	3	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	3170	-2	3130	2	3prime_fragment	FALSE	canonical	3	12908	junction_2	202.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103152050	103153384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_103152208_103152385_103152456_103152682
Isoform_2299_5	chr10	-	971	6	ISM	ENSMUSG00000039824.5	ENSMUST00000026428.4	1026	7	1266	-1	1266	1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.72046505340853	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTTCCGACAGTTTTC	4680	False	NA	-9	True	AATAAA	-15	NA	128333288	128330024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128330353_128330458_128330537_128330922_128331097_128332121_128332266_128332482_128332511_128333069
Isoform_22990_510	chr15	+	1681	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-10	5	-1	-2	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTTGTGTGATGGC	NA	False	NA	27	True	AATAAA	-15	NA	103181326	103208290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
Isoform_22993_4	chr15	+	4756	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	-33	2	0	-1	multi-exon	TRUE	canonical	3	15	junction_9	3.63027394130097	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGGATGTTTGC	NA	False	NA	8	True	ATTAAA	-22	NA	103362220	103407235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
Isoform_22995_20	chr15	+	3093	16	FSM	ENSMUSG00000022489.7	ENSMUST00000023132.5	3218	16	125	0	-118	0	multi-exon	FALSE	canonical	2	9	junction_2	5.10163372525573	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103411585	103438479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
Isoform_22996_3	chr15	+	1203	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_1	230.452251019598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGCTGTCCTGGAAC	35	False	NA	NA	False	NA	NA	NA	10486134	10493478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_22997_26	chr15	+	2261	2	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	15477	10	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTCTGCCTGTTGT	NA	False	NA	24	True	AATAAA	-25	NA	97274574	97283571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_97275170_97281905
Isoform_22998_34	chr15	+	2258	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15477	10	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTCTGCCTGTTGT	NA	False	NA	24	True	AATAAA	-25	NA	97274574	97283571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_97275170_97281908
Isoform_22999_59	chr15	+	886	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6062	-7	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	14	True	AATAAA	-14	NA	83454137	83458397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
Isoform_23000_16	chr15	+	1698	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4137	-3	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	NA	False	NA	9	True	TATAAA	-18	NA	101126205	101130634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_23001_11	chr15	+	1723	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4115	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	False	NA	12	True	TATAAA	-21	NA	101126183	101130637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
Isoform_23002_22	chr15	+	2334	19	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12574	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	22.6396898290492	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018920	98030328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
Isoform_23003_6	chr15	+	2006	8	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47460	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	46.4230765979198	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTGAAGAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	73547533	73629074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_73547681_73549310_73549460_73569915_73569999_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
Isoform_23005_6	chr15	+	5783	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2474	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	160.492913259781	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	1131	False	NA	14	True	AATAAA	-15	NA	25756376	25813757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_25756451_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
Isoform_23006_25	chr15	+	1020	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2699	13	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCTAGGAGTGGTACTC	NA	False	NA	19	True	AATAAA	-26	NA	101313028	101325683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
Isoform_23007_9	chr15	+	3635	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-304	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAGAAGCTA	NA	False	NA	-12	True	ATTAAA	-9	NA	99122437	99140679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
Isoform_23009_19	chr15	+	2401	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1192	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTCTTTTTTTCTGT	NA	False	NA	17	True	AATAAA	-19	NA	101165918	101172674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
Isoform_23010_12	chr15	+	1701	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6426	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8444	False	NA	5	True	AATAAA	-15	NA	84547394	84587874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_23011_4	chr15	+	1573	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6418	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8452	False	NA	5	True	AATAAA	-15	NA	84547402	84587874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
Isoform_23013_10	chr15	+	3487	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	136	False	NA	NA	False	AATAAA	-25	NA	36179467	36235767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
Isoform_23015_9	chr15	+	2993	13	NNC	ENSMUSG00000023018.6	novel	810	7	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	105.979918171112	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCAGGTCCCTGCTGTC	8028	False	NA	19	True	AATAAA	-10	NA	99600496	99611865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_99600561_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605521_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
Isoform_23017_3	chr15	+	2687	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4702	2243	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGATGTTTTGAGAAC	NA	False	NA	18	True	ATTAAA	-15	NA	102840489	102849287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102840603_102846713
Isoform_23018_3	chr15	+	2734	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4749	2243	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGATGTTTTGAGAAC	NA	False	NA	18	True	ATTAAA	-15	NA	102840442	102849287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_102840603_102846713
Isoform_23019_9	chr15	+	2341	11	NNC	ENSMUSG00000022489.7	novel	923	3	NA	NA	-1105	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.31268564083465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTGTTCATTAGG	NA	False	NA	13	True	AATAAA	-19	NA	103431039	103438483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_103431102_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
Isoform_2302_72	chr10	-	3820	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-125	286	-124	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8194	False	NA	-8	True	AATAAA	-12	NA	128361864	128346119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_23020_3	chr15	+	1275	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	302.072574061268	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATCCGACTTACTGT	46	False	NA	11	True	AATAAA	-16	NA	10486088	10493759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_10486113_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
Isoform_23023_4	chr15	+	1435	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCACGGAATCCTAGCC	4034	False	NA	1	True	AATAAA	-19	NA	98997303	99002616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_98997366_98998703_98999657_99002196
Isoform_23025_3	chr15	+	583	2	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTAGTCGTG	NA	False	NA	NA	False	NA	NA	NA	36560544	36566200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_36560637_36565709
Isoform_23026_5	chr15	+	2955	14	NNC	ENSMUSG00000018008.9	novel	1223	3	NA	NA	-5184	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.18671143234935	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAAGCTATTCTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	78476062	78506217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_78476226_78480604_78480781_78486892_78486976_78488835_78488901_78490046_78490114_78491156_78491276_78492325_78492407_78493961_78494075_78495648_78495798_78499916_78500029_78502575_78502653_78503461_78503534_78503988_78504144_78504694
Isoform_23027_3	chr15	+	3200	12	NNC	ENSMUSG00000022619.6	novel	382	2	NA	NA	-322	-2024	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26.5264564644806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	2065	False	NA	13	True	AATAAA	-13	NA	89338922	89346647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_89338962_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
Isoform_23029_4	chr15	+	2692	2	NNC	ENSMUSG00000050846.10	novel	2486	2	NA	NA	87	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTAATTGGCATAT	NA	False	NA	11	True	AATAAA	-17	NA	75812887	75821250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_75813301_75818971
Isoform_2303_126	chr10	-	3700	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-5	286	-4	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8314	False	NA	-8	True	AATAAA	-12	NA	128361744	128346119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_23030_5	chr15	+	894	4	NNC	ENSMUSG00000022583.13	novel	877	4	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.74165738677394	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGATCTCAGTTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	75140223	75144085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_75140299_75140550_75140649_75141628_75141746_75143481
Isoform_23031_4	chr15	+	2599	10	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	48030	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.9173403195142	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTTTTATTGCAT	NA	False	NA	7	True	AATAAA	-16	NA	86167735	86382703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_86167857_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
Isoform_23033_3	chr15	+	602	4	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	5.73488351136175	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATCATCTACTGTCTT	NA	False	NA	NA	False	AATAAA	-28	NA	42811093	42817504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_42811222_42813764_42813895_42814164_42814368_42817363
Isoform_23034_3	chr15	+	1530	2	NNC	ENSMUSG00000051225.10	novel	529	2	NA	NA	-26	-322	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAATTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	57865515	57874083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_57865908_57872945
Isoform_23035_3	chr15	+	1862	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3053638	3055500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_3053600_3055500
Isoform_23039_5	chr15	-	2541	1	FSM	ENSMUSG00000048546.9	ENSMUST00000229500.2	2590	1	50	-1	50	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	81742474	81739933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_81739900_81742500
Isoform_2304_15	chr10	-	3878	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-183	286	-182	5	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGCTTCATGAACTT	8136	False	NA	-8	True	AATAAA	-12	NA	128361922	128346119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_23041_54	chr15	+	1019	1	FSM	ENSMUSG00000061633.4	ENSMUST00000074608.4	1024	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAGTGCATTCTTAAA	6331	False	NA	9	True	AATAAA	-17	NA	81864745	81865764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81864700_81865800
Isoform_23044_4	chr12	+	204	2	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATATTAATTATTAGA	2535	False	NA	NA	False	AAAAAG	-6	NA	84319659	84339373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_84319842_84339351
Isoform_23045_7	chr15	+	3077	1	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-19830	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAGAATA	2247	False	NA	NA	False	NA	NA	NA	82031455	82034532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_82031500_82034500
Isoform_23051_6	chr15	-	179	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATAGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	82474620	82474441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_82474400_82474600
Isoform_23052_26	chr15	+	177	1	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	873	False	NA	NA	False	NA	NA	NA	82899944	82900121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_82899900_82900100
Isoform_23053_4	chr15	+	1535	1	Antisense	novelGene_ENSMUSG00000041815.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTTTCCAATACGTTC	NA	False	NA	NA	False	NA	NA	NA	83010179	83011714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_+_83010200_83011700
Isoform_23055_3	chr1	+	178	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAACCAAACT	NA	False	NA	NA	False	NA	NA	NA	54080920	54081098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_54080900_54081100
Isoform_23057_3	chr15	+	2470	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	-21	10	-21	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACGCAAGCCACCT	NA	False	NA	NA	False	AATAAA	-8	NA	83056529	83058999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_83056500_83059000
Isoform_23058_8	chr15	+	176	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	83133364	83133540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_83133400_83133500
Isoform_23060_4	chr15	+	2439	1	FSM	ENSMUSG00000098882.3	ENSMUST00000184924.3	108	1	-478	-1853	-478	1853	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84051992	84054431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_84052000_84054400
Isoform_23061_3	chr15	-	362	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTGTATGACATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	84076343	84075981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_84076000_84076300
Isoform_23065_7	chr15	-	4483	1	FSM	ENSMUSG00000055745.5	ENSMUST00000069476.5	4426	1	-41	-16	-41	16	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGTGTCTCTGGGTTTT	4986	False	NA	-1	True	ATTAAA	-30	NA	84442065	84437582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_84437600_84442100
Isoform_23066_4	chr15	-	181	1	ISM	ENSMUSG00000100967.2	ENSMUST00000189185.2	8038	2	2297	7123	2297	-7123	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	84801942	84801761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_84801800_84801900
Isoform_23071_4	chr15	+	178	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	85491272	85491450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_85491300_85491400
Isoform_23072_9	chr15	-	208	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	86078648	86078440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_86078400_86078600
Isoform_23075_89	chr15	-	599	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTTCTGTAGAATAT	NA	False	NA	-1	True	NA	NA	NA	86098574	86097975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_86098000_86098600
Isoform_23078_5	chr15	+	2961	1	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGGCCTGGCTGCTTT	NA	False	NA	19	True	NA	NA	NA	88592672	88595633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_88592700_88595600
Isoform_23080_22	chr15	+	172	1	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88611282	88611454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_88611300_88611500
Isoform_23081_3	chr15	+	865	1	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACATATTTAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	88637898	88638763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_88637900_88638800
Isoform_23084_13	chr15	-	176	1	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAACCTATG	7737	False	NA	NA	False	NA	NA	NA	89129854	89129678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_89129700_89129900
Isoform_23085_5	chr15	+	2564	1	Genic_Genomic	ENSMUSG00000054136.7	novel	NA	NA	NA	NA	261	813	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	89207183	89209747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_+_89207200_89209700
Isoform_23087_42	chr15	+	1946	1	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	-11	-6183	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89239954	89241900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_89240000_89241900
Isoform_23090_1376	chr15	-	435	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-23	-34	-23	34	mono-exon	FALSE	NA	NA	NA	NA	NA	1376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	90648882	90648447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_90648400_90648900
Isoform_23091_509	chr15	-	501	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-89	-34	-89	34	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	90648948	90648447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_90648400_90648900
Isoform_23097_16	chr15	+	638	1	FSM	ENSMUSG00000067869.5	ENSMUST00000117942.2	904	1	-102	368	-102	-368	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGGAATACAGACATGA	NA	False	NA	NA	False	NA	NA	NA	90766715	90767353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_90766700_90767400
Isoform_23100_5	chr15	-	1770	1	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACGAGAAAAAAAACACACT	NA	False	NA	NA	False	NA	NA	NA	93032023	93030253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_93030300_93032000
Isoform_23101_5	chr7	+	172	1	Intergenic	novelGene_1843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101798107	101798279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_101798100_101798300
Isoform_23102_3	chr15	-	397	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGGGTCAA	NA	False	NA	-9	True	AATAAA	-16	NA	93576889	93576492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_93576500_93576900
Isoform_23104_6	chr15	-	219	1	ISM	ENSMUSG00000033228.9	ENSMUST00000227133.2	2599	2	10576	266	-3652	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATTTCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	96348105	96347886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_96347900_96348100
Isoform_23105_16	chr15	-	182	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	96390973	96390791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_96390800_96391000
Isoform_23108_5	chr15	-	1119	1	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	-8926	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAAAAAAAGCCA	NA	False	NA	NA	False	AAAAAG	-14	NA	96597590	96596471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_96596500_96597600
Isoform_2311_6	chr10	-	3572	30	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	46.0395063770619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACAGTGCTTCATGAA	8301	False	NA	-11	True	AATAAA	-9	NA	128361757	128346122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
Isoform_23110_6	chr15	+	237	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAACAATATACAGGGAC	NA	False	NA	76	True	NA	NA	NA	97024529	97024766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_97024500_97024800
Isoform_23113_5	chr15	+	183	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97301289	97301472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_97301300_97301500
Isoform_23115_3	chr15	+	1601	1	ISM	ENSMUSG00000091050.2	ENSMUST00000163781.2	2147	2	657	2	657	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAATAAATTATAT	9474	False	NA	NA	False	NA	NA	NA	98465861	98467462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_98465900_98467500
Isoform_23116_3	chr15	-	203	1	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCGTATAAACTTTCTC	6480	False	NA	NA	False	NA	NA	NA	98561289	98561086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_98561100_98561300
Isoform_23117_5	chr15	-	2428	1	FSM	ENSMUSG00000003355.8	ENSMUST00000229562.2	2411	1	-22	5	-10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	98626043	98623615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_98623600_98626000
Isoform_23118_9	chr15	-	3038	1	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	38	-17543	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	1837	False	NA	NA	False	NA	NA	NA	98661054	98658016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_98658000_98661100
Isoform_23119_10	chr15	-	199	1	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATAAGAGTTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	98681813	98681614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_98681600_98681800
Isoform_23120_4	chr15	-	2209	1	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	37299	7	3280	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAAGTGCCTCTGTCCC	9616	False	NA	NA	False	NA	NA	NA	98731765	98729556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_98729600_98731800
Isoform_2313_22	chr10	-	2298	3	FSM	ENSMUSG00000039810.12	ENSMUST00000152539.8	992	3	205	-1511	205	1229	multi-exon	FALSE	canonical	3	17	junction_2	46	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAATTTCTTT	NA	False	NA	-14	True	AATAAA	-17	NA	128383303	128379437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128381408_128382696_128382761_128383039
Isoform_23133_3	chr15	+	200	1	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGAAAAATAAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	98895558	98895758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_98895600_98895800
Isoform_23139_3	chr15	+	233	1	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTACCATGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	99181216	99181449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_99181200_99181400
Isoform_2314_3	chr10	-	2161	4	NIC	ENSMUSG00000039810.12	novel	565	5	NA	NA	-3	1229	intron_retention	FALSE	canonical	1	1	junction_3	47.5908487935327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAATTTCTTT	NA	False	NA	-14	True	AATAAA	-17	NA	128383615	128379437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_128381408_128382696_128382761_128383039_128383114_128383562
Isoform_23140_4	chr15	+	182	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGGGGGGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	99248475	99248657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_99248500_99248700
Isoform_23141_4	chr15	-	1212	1	FSM	ENSMUSG00000037525.6	ENSMUST00000229827.2	4628	1	4	3412	4	-3412	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAAGAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	99372585	99371373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99371400_99372600
Isoform_23142_7	chr15	+	177	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99566059	99566236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_99566100_99566200
Isoform_23146_3	chr15	-	837	1	FSM	ENSMUSG00000100084.3	ENSMUST00000188271.3	1130	1	-12	305	-12	-305	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTGA	4274	False	NA	NA	False	NA	NA	NA	99871180	99870343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_99870300_99871200
Isoform_23147_4	chr15	-	178	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGGGAAACT	NA	False	NA	NA	False	NA	NA	NA	99977688	99977510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_99977500_99977700
Isoform_23148_3	chr15	+	174	1	Antisense	novelGene_ENSMUSG00000022197.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGACTACAGCT	NA	False	NA	NA	False	NA	NA	NA	12412353	12412527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_+_12412400_12412500
Isoform_23149_4	chr15	+	627	1	NIC	ENSMUSG00000054619.8	novel	674	3	NA	NA	4	75	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAACAAACAAACAAA	570	False	NA	NA	False	NA	NA	NA	100202673	100203300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100202700_100203300
Isoform_2315_133	chr10	-	2090	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	28	1603	-3	1232	multi-exon	FALSE	canonical	3	75	junction_2	17	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAATTTCTTTGAT	NA	False	NA	-11	True	AATAAA	-20	NA	128383615	128379434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128381408_128382696_128382761_128383562
Isoform_23150_4	chr8	+	165	1	Intergenic	novelGene_1884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAATTAA	1184	False	NA	NA	False	NA	NA	NA	3667147	3667312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_3667100_3667300
Isoform_23152_4	chr15	+	1863	1	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	281	516	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100513510	100515373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100513500_100515400
Isoform_23153_4	chr10	+	196	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77179797	77179993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_77179800_77180000
Isoform_23154_27	chr15	+	1255	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	-72	-181	-72	181	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	90	False	NA	NA	False	AATAAA	-15	NA	12574902	12576157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_12574900_12576200
Isoform_23155_3	chr15	+	1850	1	NIC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	22	-11345	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100659649	100661499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_100659600_100661500
Isoform_23156_31	chr15	+	1497	1	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	37	-7035	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAAAGC	6278	False	NA	NA	False	NA	NA	NA	101122105	101123602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_101122100_101123600
Isoform_23161_3	chr15	-	2279	1	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	264	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102088032	102085753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_102085800_102088000
Isoform_23164_13	chr15	+	2195	1	NIC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	94	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCACTTGTCCT	NA	False	NA	15	True	AATAAA	-11	NA	102187982	102190177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_102188000_102190200
Isoform_23168_4	chr15	+	229	1	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAAGGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	16198721	16198950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_16198700_16199000
Isoform_23169_4	chr15	+	187	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATTTTTAATTGT	NA	False	NA	NA	False	NA	NA	NA	102435626	102435813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_102435600_102435800
Isoform_23172_10	chr15	+	178	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102560618	102560796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_102560600_102560800
Isoform_23174_3	chr15	+	176	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19376328	19376504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_19376300_19376500
Isoform_23175_3	chr15	-	3547	1	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	GGGGCT	-34	NA	102840068	102836521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_102836500_102840100
Isoform_23176_10	chr15	-	776	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTGAGATGAGTGTGC	NA	False	NA	-2	True	AATAAA	-15	NA	102840091	102839315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_102839300_102840100
Isoform_23177_4	chr15	-	2492	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	45778	3	21267	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTTGAGTGGTAGTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	103102465	103099973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_103100000_103102500
Isoform_23178_4	chr15	-	2734	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	45536	3	21025	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTTGAGTGGTAGTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	103102707	103099973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_103100000_103102700
Isoform_23179_4	chr15	-	708	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	47557	8	23046	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGATCTTGAGTGGTA	1423	False	NA	-8	True	AATAAA	-14	NA	103100686	103099978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_103100000_103100700
Isoform_23180_11	chr15	-	1570	1	Genic_Genomic	ENSMUSG00000009575.15	novel	NA	NA	NA	NA	-9	-25174	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	103148252	103146682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_-_103146700_103148300
Isoform_23185_17	chr15	+	368	1	ISM	ENSMUSG00000046434.17	ENSMUST00000230489.2	3118	13	4122	1736	4095	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATGACAACTGTATGG	NA	False	NA	0	True	AATAAA	-18	NA	103153015	103153383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_+_103153000_103153400
Isoform_23187_3	chr15	+	178	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGCCGTCTCTTCATC	675	False	NA	NA	False	NA	NA	NA	103297417	103297595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_103297400_103297600
Isoform_23188_34	chr15	-	221	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCCTAGCACCTATATC	9351	False	NA	NA	False	NA	NA	NA	103314179	103313958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_103314000_103314200
Isoform_23189_8	chr15	-	1669	1	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	3524	False	NA	NA	False	NA	NA	NA	22701485	22699816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22701500
Isoform_2319_624	chr10	-	464	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	78	2	27	1	multi-exon	FALSE	canonical	3	15318	junction_2	3514.5	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTTACGTGTTTTT	NA	False	NA	-20	True	AATAAA	-27	NA	128384944	128383984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128384299_128384526_128384550_128384817
Isoform_23190_5	chr15	-	2401	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	2792	False	NA	NA	False	NA	NA	NA	22702217	22699816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22702200
Isoform_23191_5	chr15	-	2481	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	2703	False	NA	NA	False	NA	NA	NA	22702306	22699825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22702300
Isoform_23194_5	chr15	-	1688	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	3502	False	NA	NA	False	NA	NA	NA	22701507	22699819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22701500
Isoform_23196_5	chr15	-	2209	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	2981	False	NA	NA	False	NA	NA	NA	22702028	22699819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22702000
Isoform_23200_6	chr15	-	1519	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	3639	False	NA	NA	False	NA	NA	NA	22701370	22699825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_22700723_22700748
Isoform_23201_3	chr15	-	1902	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	3256	False	NA	NA	False	NA	NA	NA	22701753	22699825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_22700723_22700748
Isoform_23202_5	chr15	-	2296	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	2888	False	NA	NA	False	NA	NA	NA	22702121	22699825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22699800_22702100
Isoform_23203_3	chr11	-	3109	2	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57448745	57433745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_57433756_57445646
Isoform_2321_230	chr10	-	387	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	48	2	-2	1	multi-exon	FALSE	canonical	3	590	junction_3	9065.73447413697	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTTACGTGTTTTT	NA	False	NA	-20	True	AATAAA	-27	NA	128384983	128383984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
Isoform_23212_849	chr15	-	2760	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	849	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACAGTGGTAGGAGAA	9797	False	NA	NA	False	NA	NA	NA	22705093	22702333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_22702300_22705100
Isoform_2322_10392	chr10	-	389	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	191	2	-2	1	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	10392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTTACGTGTTTTT	NA	False	NA	-20	True	AATAAA	-27	NA	128384983	128383984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
Isoform_23231_3	chr15	-	180	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAACAGT	NA	False	NA	NA	False	NA	NA	NA	25741536	25741356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_25741400_25741500
Isoform_23234_4	chr15	+	169	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAAAGACCGA	1719	False	NA	NA	False	NA	NA	NA	31226895	31227064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_31226900_31227100
Isoform_23235_4	chr15	+	1389	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31531255	31532644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_31531300_31532600
Isoform_23239_366	chr15	+	978	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-37	-122	-37	122	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	6683366	6684344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_6683400_6684300
Isoform_23242_12	chr15	+	2285	1	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAGAAAG	144	False	NA	NA	False	NA	NA	NA	33221529	33223814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_33221500_33223800
Isoform_23245_4	chr15	-	3976	1	FSM	ENSMUSG00000038984.5	ENSMUST00000042021.5	4010	1	38	-4	38	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTTAATATTACAAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	33687992	33684016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_33684000_33688000
Isoform_23246_101	chr15	+	2904	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	3	-1	3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	33831596	33834500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_33831600_33834500
Isoform_23252_9	chr15	+	173	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAACACCATAG	NA	False	NA	NA	False	NA	NA	NA	36459657	36459830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_36459700_36459800
Isoform_23253_283	chr15	-	367	1	Genic_Genomic	ENSMUSG00000022283.16	novel	NA	NA	NA	NA	1400	1	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	9264	False	NA	-6	True	AATAAA	-17	NA	36596270	36595903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_-_36595900_36596300
Isoform_23264_4	chr15	+	2689	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCCAGATA	NA	False	NA	NA	False	AAAACA	-11	NA	36668082	36670771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_36668100_36670800
Isoform_23272_6	chr15	+	191	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATATAAAAAAAAAGAAAG	NA	False	NA	NA	False	AATATA	-2	NA	37001858	37002049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_37001900_37002000
Isoform_23278_47	chr15	-	316	1	NIC	ENSMUSG00000037465.11	novel	2144	5	NA	NA	0	-517	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38300950	38300634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_38300600_38301000
Isoform_23280_5	chr15	-	2338	1	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	-2457	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	38519510	38517172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_38517200_38519500
Isoform_23284_13	chr15	-	180	1	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGTGCAC	NA	False	NA	NA	False	NA	NA	NA	41054259	41054079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_41054100_41054300
Isoform_23285_21	chr15	+	207	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATACACAT	NA	False	NA	NA	False	NA	NA	NA	41810480	41810687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_41810500_41810700
Isoform_23286_4	chr15	-	178	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTTTAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	41855341	41855163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_41855200_41855300
Isoform_23287_4	chr15	+	946	1	NIC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	18	-64846	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAATCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4056183	4057129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_4056200_4057100
Isoform_23288_9	chr15	+	436	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	44773311	44773747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_44773300_44773700
Isoform_23289_4	chr15	+	212	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCACCCTGCATTTAAA	9126	False	NA	34	True	NA	NA	NA	46333722	46333934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_46333700_46333900
Isoform_23290_21	chr15	+	177	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50413668	50413845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_50413700_50413800
Isoform_23291_3	chr15	+	182	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTTAAAAATTTTT	1989	False	NA	NA	False	NA	NA	NA	8115662	8115844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_8115700_8115800
Isoform_23292_5	chr15	-	587	1	Genic_Genomic	ENSMUSG00000038679.17	novel	NA	NA	NA	NA	-7	-43286	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9961	False	NA	NA	False	ATTAAA	-15	NA	50753444	50752857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_-_50752900_50753400
Isoform_23294_6	chr15	+	2516	1	NIC	ENSMUSG00000022313.11	novel	2921	3	NA	NA	21	-2718	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTTTAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	51740845	51743361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_51740800_51743400
Isoform_23296_4	chrX	-	176	1	Intergenic	novelGene_2157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	47619771	47619595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_47619600_47619800
Isoform_23297_3	chr15	+	3139	1	NIC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	49	-93381	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	54975761	54978900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_54975800_54978900
Isoform_23298_13	chr15	+	3044	1	NIC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	37	-93381	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	54975856	54978900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_54975900_54978900
Isoform_23299_3	chr15	+	5303	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55734986	55740289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_55735000_55740300
Isoform_233_728	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
Isoform_23306_52	chr15	+	5234	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55735055	55740289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_55735100_55740300
Isoform_23309_3	chr15	-	204	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATGAAAGGTAAACAATT	NA	False	NA	NA	False	NA	NA	NA	57899457	57899253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_57899300_57899500
Isoform_23310_13	chr2	+	178	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	28495263	28495441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_28495300_28495400
Isoform_23312_6	chr15	-	782	1	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAATAT	6725	False	NA	NA	False	NA	NA	NA	58027617	58026835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_58026800_58027600
Isoform_23313_5	chr15	+	175	1	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58244917	58245092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_58244900_58245100
Isoform_23314_3	chr15	+	195	1	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGATAGGTAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	58631006	58631201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_58631000_58631200
Isoform_23316_21	chr15	+	1631	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	-19	2842	-19	-2842	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAATTCTGCATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	58744503	58746134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_58744500_58746100
Isoform_23321_3	chr15	+	2687	1	FSM	ENSMUSG00000097493.4	ENSMUST00000192865.2	2657	1	-14	-16	-14	16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCTGGTGAATATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	60694787	60697474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_60694800_60697500
Isoform_23323_3	chr15	+	254	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAATAAAATTAATTA	NA	False	NA	NA	False	NA	NA	NA	8214209	8214463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_8214200_8214500
Isoform_23324_15	chr15	-	188	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8227516	8227328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_8227300_8227500
Isoform_23325_7	chr15	+	1145	1	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	-4	-26477	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	3846	False	NA	NA	False	NA	NA	NA	66449424	66450569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_66449400_66450600
Isoform_23326_3	chr15	-	2138	2	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	68130447	68128287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_68129117_68129138
Isoform_23328_978	chr15	+	549	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	-36	-30	-36	30	mono-exon	FALSE	NA	NA	NA	NA	NA	978	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	68181631	68182180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_68181600_68182200
Isoform_23330_3	chr2	+	178	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	167207282	167207460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_167207300_167207500
Isoform_23333_4	chr15	-	4427	1	FSM	ENSMUSG00000106847.2	ENSMUST00000202826.2	4725	1	289	9	289	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCTGAAGAACATGGGAA	NA	False	NA	-7	True	AATAAA	-18	NA	72681884	72677457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_72677500_72681900
Isoform_23334_3	chr12	-	175	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAATCCAGGA	NA	False	NA	NA	False	NA	NA	NA	31623277	31623102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_31623100_31623300
Isoform_23335_4	chr15	-	2495	1	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	86583	14	15702	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGCTGCCTATTCCGA	NA	False	NA	35	True	AATAAA	-21	NA	72970201	72967706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_72967700_72970200
Isoform_23336_3	chr15	-	201	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACATTTTCACGGTGG	NA	False	NA	NA	False	NA	NA	NA	73322864	73322663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_73322700_73322900
Isoform_23337_7	chr15	-	1191	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	73534288	73533097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_73533100_73534300
Isoform_23340_375	chr15	-	846	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-105	-93	-105	93	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTAAGATTTGTTT	NA	False	NA	NA	False	AAGAAA	-15	NA	73966287	73965441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_73965400_73966300
Isoform_23347_17	chr15	+	851	1	FSM	ENSMUSG00000022587.15	ENSMUST00000191439.2	815	1	-35	-1	-5	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	8382	False	NA	NA	False	NA	NA	NA	74827496	74828347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_74827500_74828300
Isoform_23348_3	chr15	-	785	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTATGAAAAGAATAAATT	424	False	NA	NA	False	NA	NA	NA	74958896	74958111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_74958100_74958900
Isoform_23349_3	chr15	+	1049	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAAGT	9631	False	NA	NA	False	NA	NA	NA	75713939	75714988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_75713900_75715000
Isoform_23350_11	chr6	-	177	1	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	91852015	91851838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_91851800_91852000
Isoform_23351_3	chr15	+	2511	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	-96	2386	-96	-2386	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTCTTCCTGGGGAA	NA	False	NA	NA	False	ATTAAA	-11	NA	75781487	75783998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75781500_75784000
Isoform_23352_7	chr15	+	2439	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	-18	2380	-18	-2380	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGGGGAACCCATG	NA	False	NA	NA	False	ATTAAA	-17	NA	75781565	75784004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_75781600_75784000
Isoform_23353_8	chr15	-	3210	1	NIC	ENSMUSG00000022570.8	novel	1270	11	NA	NA	2	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGGAAAAAAAAAAAAAAAAA	8906	False	NA	NA	False	NA	NA	NA	75801615	75798405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_-_75798400_75801600
Isoform_23354_39	chr15	-	2112	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	472	0	459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75853832	75851720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75851700_75853800
Isoform_23359_6	chr1	-	169	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTTGATTGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	44462749	44462580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_44462600_44462700
Isoform_23361_56	chr15	-	1031	1	FSM	ENSMUSG00000002524.18	ENSMUST00000228459.2	1008	1	-27	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	75952758	75951727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_75951700_75952800
Isoform_23362_3	chr15	-	1989	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	26873	0	15081	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	NA	False	NA	-7	True	AATAAA	-18	NA	76057162	76055173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76055200_76057200
Isoform_23363_3	chr15	-	2358	1	ISM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	26501	3	14709	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGGGTCTTGCCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	76057534	76055176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr15_-_76055200_76057500
Isoform_23364_3	chr15	+	168	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGGGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	76111535	76111703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_76111500_76111700
Isoform_23369_11	chr15	+	3169	1	FSM	ENSMUSG00000022556.12	ENSMUST00000228388.2	3133	1	-35	-1	-8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAG	7113	False	NA	NA	False	GGGGCT	-36	NA	76361613	76364782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_76361600_76364800
Isoform_23370_6	chr15	-	176	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	8835155	8834979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_8835000_8835200
Isoform_23372_10	chr6	-	178	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7218	False	NA	NA	False	NA	NA	NA	125042632	125042454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_125042500_125042600
Isoform_23373_3	chr15	+	2185	1	Antisense	novelGene_ENSMUSG00000033565.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77190882	77193067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_+_77190900_77193100
Isoform_23374_3	chr15	+	176	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77219324	77219500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_77219300_77219500
Isoform_23376_15	chr15	+	183	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77717120	77717303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_77717100_77717300
Isoform_23378_5	chr15	-	1741	1	FSM	ENSMUSG00000084497.3	ENSMUST00000122548.3	100	1	-1420	-221	-1420	221	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	AATAAA	-17	NA	77726376	77724635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_77724600_77726400
Isoform_23379_5	chr15	+	177	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	77728069	77728246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_77728100_77728200
Isoform_2338_616	chr10	-	2510	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	-3	-24	1	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTGTTCTCTTTGT	8668	False	NA	-4	True	AATAAA	-15	NA	128401880	128393633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
Isoform_23383_9	chr15	-	1799	1	FSM	ENSMUSG00000068226.4	ENSMUST00000180449.2	441	1	-275	-1083	-275	1083	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATCCTTTTAATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	78439323	78437524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_-_78437500_78439300
Isoform_23385_6	chr15	+	2662	1	Genic_Genomic	ENSMUSG00000049521.3	novel	NA	NA	NA	NA	-7	-5619	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78726816	78729478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_+_78726800_78729500
Isoform_23387_4	chr15	-	1378	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	78783800	78782422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_78782400_78783800
Isoform_23388_19	chr15	-	177	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAACAAAATA	7096	False	NA	NA	False	NA	NA	NA	78848622	78848445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_78848400_78848600
Isoform_23389_457	chr15	+	2045	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	0	10	0	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAAAAATCTGAGTGGT	1147	False	NA	11	True	AATAAA	-7	NA	78912649	78914694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_78912600_78914700
Isoform_2339_767	chr10	-	1633	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	874	-24	-874	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCACCGTCGTCAAGCC	8668	False	NA	-16	True	AATAAA	-12	NA	128401880	128394510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
Isoform_23393_4	chr15	-	179	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78955815	78955636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_78955600_78955800
Isoform_23394_6	chr9	-	177	1	Intergenic	novelGene_2000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13702597	13702420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_13702400_13702600
Isoform_23395_3	chr15	+	2645	1	NIC	ENSMUSG00000068206.14	novel	2054	13	NA	NA	-2	-2322	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACAAAACCAAGTAA	4381	False	NA	NA	False	AATAAA	-41	NA	79113579	79116224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79113600_79116200
Isoform_23396_26	chr15	-	924	1	Antisense	novelGene_ENSMUSG00000042622.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGCTTCTATCTCAGA	NA	False	NA	1	True	AGTAAA	-22	NA	79242004	79241080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr15_-_79241100_79242000
Isoform_23398_6	chr15	+	2179	1	NIC	ENSMUSG00000010830.9	novel	1411	5	NA	NA	20	-9130	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAGACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79400631	79402810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79400600_79402800
Isoform_23402_3	chr15	-	176	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	9170417	9170241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_9170200_9170400
Isoform_23403_4	chr15	-	1080	1	Genic_Genomic	ENSMUSG00000022429.12	novel	NA	NA	NA	NA	-22	-41669	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	79489332	79488252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_-_79488300_79489300
Isoform_23406_3	chr15	+	741	1	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	51	-15536	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAAAAGATGGGA	NA	False	NA	NA	False	NA	NA	NA	79575096	79575837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79575100_79575800
Isoform_23413_3	chr2	+	2910	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	50880815	50883725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_50880800_50883700
Isoform_23415_12	chr15	-	5182	1	Genic_Genomic	ENSMUSG00000053411.17	novel	NA	NA	NA	NA	-7	-35397	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCTTGAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79855327	79850145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr15_-_79850100_79855300
Isoform_23419_16	chr15	-	2328	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGTCTTGGCTACATT	9	False	NA	1	True	NA	NA	NA	9357161	9354833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_9354800_9357200
Isoform_23420_12	chr15	+	1979	1	NIC	ENSMUSG00000022415.13	novel	819	4	NA	NA	15	-18325	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-8	NA	79975559	79977538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_79975600_79977500
Isoform_23421_4	chr2	-	248	3	Antisense	novelGene_ENSMUSG00000070544.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGACTCCCACTTCT	NA	False	NA	NA	False	TTTAAA	-19	NA	160498152	160492884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_160492896_160493075_160493189_160498028
Isoform_23422_3	chr15	+	4005	2	NNC	ENSMUSG00000022414.9	novel	504	2	NA	NA	-8	-11522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACCCAAG	4985	False	NA	NA	False	NA	NA	NA	80017319	80021347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr15_+_80019328_80019350
Isoform_23423_4	chr15	-	177	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTACTTGATG	NA	False	NA	NA	False	NA	NA	NA	80062916	80062739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_80062700_80062900
Isoform_23424_3	chr15	+	903	1	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	3	292	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAAATTAAACAAAAGCA	2846	False	NA	NA	False	NA	NA	NA	80118311	80119214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr15_+_80118300_80119200
Isoform_23427_3	chr15	+	190	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTCTTGTCTGGAGA	9825	False	NA	NA	False	NA	NA	NA	80588204	80588394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_80588200_80588400
Isoform_23428_7	chr15	+	197	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGGCTGCATAGTA	NA	False	NA	-1	True	NA	NA	NA	80888922	80889119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_80888900_80889100
Isoform_23430_4	chr15	-	172	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAAACAA	7232	False	NA	NA	False	NA	NA	NA	81367652	81367480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_81367500_81367700
Isoform_23431_20	chr15	-	175	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACTTTTTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81437619	81437444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_81437400_81437600
Isoform_23432_5	chr15	+	2449	1	FSM	ENSMUSG00000055024.13	ENSMUST00000185375.3	2997	1	-32	580	-32	-580	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAGAAGAAAAAGAAG	2831	False	NA	NA	False	NA	NA	NA	81469519	81471968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr15_+_81469500_81472000
Isoform_23436_3	chr16	-	2852	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	48	-1058	-8	1058	multi-exon	FALSE	canonical	3	18	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATCTCCAAAGAAAAAAACA	4438	False	NA	NA	False	ATTAAA	-38	NA	3702377	3682095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_3684595_3689013_3689141_3702151
Isoform_23437_3	chr16	-	2914	5	ISM	ENSMUSG00000039738.17	ENSMUST00000156542.8	5116	14	9225	26	-974	-17	3prime_fragment	FALSE	canonical	3	45	junction_4	5.53962995154008	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	NA	False	NA	3	True	AATAAA	-19	NA	3804357	3797013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854
Isoform_23438_3	chr16	-	6148	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-20	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.3825297731622	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	5	True	AATAAA	-21	NA	3821654	3797011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809655_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
Isoform_23441_415	chr16	-	2320	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895691	3857834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_23442_1218	chr16	-	2280	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	31	9	-21	-9	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGTGGCAGACGTTTT	NA	False	NA	-12	True	ATTAAA	-13	NA	3895660	3857843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_23445_88	chr16	-	3035	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	intron_retention	TRUE	canonical	3	963	junction_14	113.904410993385	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
Isoform_23448_10	chr16	-	5126	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-634	15	56	1	multi-exon	TRUE	canonical	2	3	junction_5	2.72763633939717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	4238306	4105407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
Isoform_23449_7	chr16	-	5178	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-686	15	4	1	multi-exon	FALSE	canonical	2	3	junction_5	2.72763633939717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	4238358	4105407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
Isoform_23450_12	chr16	-	3749	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTGGCCTTCTTGATT	NA	False	NA	0	True	AATAAA	-18	NA	4359671	4298076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
Isoform_23451_5	chr16	-	3724	6	NNC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	26995	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	10.4192130221049	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTGGCCTTCTTGATT	6778	False	NA	0	True	AATAAA	-18	NA	4313932	4298076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4313829
Isoform_23452_179	chr16	-	2129	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	114	4	114	-4	multi-exon	FALSE	canonical	3	103	junction_5	11.6010057035299	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCTGTAGTTATTGAG	NA	False	NA	-4	True	AATAAA	-18	NA	4377604	4362528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
Isoform_23454_38	chr16	-	2235	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	10	2	10	-2	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	-2	True	AATAAA	-20	NA	4377708	4362526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
Isoform_23456_4	chr16	-	1889	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	-913	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	41.7149719991383	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	NA	False	NA	-2	True	AATAAA	-20	NA	4378631	4362526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4378560
Isoform_23457_372	chr16	-	552	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	43	1	-9	-1	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	-16	True	AATAAA	-27	NA	4442809	4434328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
Isoform_23459_5	chr16	-	703	5	NNC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-22	-10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	540.407947757988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGCATATGTTCCTGT	NA	False	NA	-25	True	AATAAA	-18	NA	4442822	4434337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4436015_4442714
Isoform_23460_5	chr16	-	494	4	NIC	ENSMUSG00000014301.14	novel	596	5	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	586.024648704207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCTGTTTGAGAAGG	NA	False	NA	-16	True	AATAAA	-27	NA	4442836	4434328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4434498_4434676_4434743_4434989_4435127_4442714
Isoform_23461_75	chr16	-	3478	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	67	751	3	493	multi-exon	FALSE	canonical	3	90	junction_15	10.2195380265448	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497574	4444747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_23462_3	chr16	-	4221	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	45	30	10	-30	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGTTAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4497596	4444026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
Isoform_23465_199	chr16	-	1170	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	10	1260	5	-2	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTTTCCCAAAAGAAAA	4853	False	NA	-8	True	AATAAA	-16	NA	4536963	4529182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_23467_5	chr16	-	1309	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-130	1261	-83	-3	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTTTCCCAAAAGAAA	4713	False	NA	-9	True	AATAAA	-15	NA	4537103	4529183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_23469_12	chr16	-	1266	5	FSM	ENSMUSG00000063445.15	ENSMUST00000115851.10	1306	5	47	-7	0	7	multi-exon	FALSE	canonical	1	3	junction_1	76.6811580507233	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGAAAAGGCCTCTGT	4843	False	NA	1	True	AATAAA	-25	NA	4536973	4529173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4529545_4531503_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_23470_15	chr16	-	1151	4	ISM	ENSMUSG00000063445.15	ENSMUST00000074970.8	1155	5	-24	1116	20	1098	5prime_fragment	FALSE	canonical	3	167	junction_3	9.79795897113271	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGCTAGGTTTTTTTG	4816	False	NA	NA	False	NA	NA	NA	4537000	4531274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
Isoform_23471_207	chr16	-	2525	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	49	1379	-6	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607805	4584703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_23473_6	chr16	-	3896	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	58	-1	-2	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGGCTCTATACTA	NA	False	NA	-2	True	TATAAA	-22	NA	4607796	4583323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_23474_8	chr16	-	2589	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	-15	1379	-15	1	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607869	4584703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_23477_14	chr16	-	2538	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	15	1	-11	-1	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTCTATTTTAGACCA	NA	False	NA	-15	True	AATAAA	-13	NA	4608141	4584705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
Isoform_23480_14	chr16	-	3140	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4607799	4584703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
Isoform_23482_14	chr16	-	1987	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-142	6	-142	4	multi-exon	FALSE	canonical	3	334	junction_1	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	NA	False	NA	-7	True	NA	NA	NA	4698321	4692647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4693734_4694225_4694286_4697480
Isoform_23483_15	chr16	-	1348	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	497	6	-13	4	multi-exon	FALSE	canonical	3	334	junction_1	8.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	156	False	NA	-7	True	NA	NA	NA	4697682	4692647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4693734_4694225_4694286_4697480
Isoform_23484_86	chr16	-	2435	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	-38	1	-6	-1	multi-exon	FALSE	canonical	3	59	junction_1	12.8608842522589	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGGGGGCTCATTTG	8185	False	NA	-6	True	AATAAA	-12	NA	4782075	4759300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_23485_4	chr16	-	2271	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	24.2840597008728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8180	False	NA	-3	True	AATAAA	-15	NA	4782080	4759297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4781983
Isoform_23486_4	chr16	-	2072	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-10	3	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	24.9154693362356	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGCTCATTTGTGAT	8181	False	NA	-2	True	AATAAA	-16	NA	4782079	4759296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
Isoform_23487_8	chr16	-	2343	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	2	5	combination_of_known_junctions	TRUE	canonical	3	18	junction_1	20.4717691793683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCTCATTTGTGATCA	8194	False	NA	0	True	AATAAA	-18	NA	4782066	4759294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_23488_4	chr16	-	2522	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	70	junction_1	11.019175206077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGGGGGCTCATTTG	8199	False	NA	-6	True	AATAAA	-12	NA	4782061	4759300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_23489_5	chr16	-	1968	7	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	-7	3835	-6	764	5prime_fragment	FALSE	canonical	3	74	junction_6	6.51707159867238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGACAAAAAACAAAAAA	8185	False	NA	NA	False	NA	NA	NA	4782075	4767467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
Isoform_23490_5	chr16	-	1312	11	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	148.536325523422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTCTGTCTGTCTGTC	NA	False	NA	-3	True	AATAAA	-17	NA	4831385	4826594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_23491_452	chr16	-	1368	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-13	0	-3	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831394	4826593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_23492_14	chr16	-	1947	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831425	4826593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_23493_7	chr16	-	1288	10	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	156.342769990796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831413	4826593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
Isoform_23498_242	chr16	-	3282	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	4	-6	-2	6	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTATCATTGTACCCAAA	8114	False	NA	-2	True	AATAAA	-19	NA	4867723	4831766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
Isoform_23500_12	chr16	-	3424	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	406.843028697801	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8093	False	NA	-5	True	AATAAA	-16	NA	4867744	4831769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
Isoform_23505_678	chr16	-	3304	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-6	-6	0	6	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTATCATTGTACCCAAA	8110	False	NA	-2	True	AATAAA	-19	NA	4867727	4831766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
Isoform_23508_15	chr16	-	3423	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8113	False	NA	-4	True	AATAAA	-17	NA	4867724	4831768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
Isoform_23509_14	chr16	-	3342	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	375.81810759994	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8110	False	NA	-4	True	AATAAA	-17	NA	4867727	4831768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
Isoform_23515_116	chr16	-	2118	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	22	3	12	-3	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCACCAGGGGGCG	NA	False	NA	NA	False	AATAAA	-12	NA	5021854	5013155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
Isoform_23517_3	chr16	-	2275	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	53	-3	intron_retention	FALSE	canonical	3	106	junction_1	5.80947501931113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCACCAGGGGGCG	NA	False	NA	NA	False	AATAAA	-12	NA	5021813	5013155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017916_5019237_5019378_5021204_5021664_5021760
Isoform_23518_41	chr16	-	2134	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	34	2	7	-2	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073813	5062017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_23523_70	chr16	-	975	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	12	0	-3	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073808	5065238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
Isoform_23526_13	chr16	-	2567	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	174	650	174	-650	multi-exon	FALSE	canonical	3	58	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGTGGGTTAGTTC	NA	False	NA	NA	False	AATACA	-14	NA	8455402	8451742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_8454257_8455349
Isoform_23528_13	chr16	-	2715	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	27	649	27	-649	multi-exon	FALSE	canonical	3	58	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTGGGTTAGTTCT	NA	False	NA	NA	False	AATACA	-15	NA	8455549	8451741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_8454257_8455349
Isoform_23529_5	chr16	-	2971	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-232	652	-232	-652	multi-exon	FALSE	canonical	3	58	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTTTGTGGGTTAGT	NA	False	NA	NA	False	AATACA	-12	NA	8455808	8451744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_8454257_8455349
Isoform_23533_218	chr16	-	2856	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	2	0	-2	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGACTGTAAAAGGTTG	NA	False	NA	-13	True	AATAAA	-19	NA	8490019	8476445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
Isoform_23536_4	chr16	-	4937	33	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-41	-19	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	226.28742784344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCTATAAAAATTATAAT	NA	False	NA	NA	False	AATAAA	-2	NA	8610213	8507482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
Isoform_23542_18	chr16	-	4805	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-63	3	-63	2	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGACTGCTGTGGAAGCC	NA	False	NA	NA	False	AATAAA	-23	NA	8610235	8507461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
Isoform_23543_5	chr16	-	4708	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	-12	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTATAATCCGATGA	NA	False	NA	NA	False	AATAAA	-9	NA	8601246	8507475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
Isoform_23547_4	chr16	-	3035	2	ISM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-64	64580	-64	-48215	5prime_fragment	FALSE	canonical	3	419	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAACAAAAATT	NA	False	NA	NA	False	NA	NA	NA	8610236	8572038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_8574937_8610099
Isoform_23548_5	chr16	-	2974	2	ISM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	0	64577	0	-48212	5prime_fragment	FALSE	canonical	3	419	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	8610172	8572035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_8574937_8610099
Isoform_23549_14	chr16	-	3419	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	12	9	12	-9	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTTGGATAATTGTAT	NA	False	NA	-14	True	ATTAAA	-22	NA	10131820	10099621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
Isoform_23553_5	chr16	-	1588	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	210	5	168	-5	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGTCTTTAGGAAAAT	NA	False	NA	-1	True	AATAAA	-17	NA	10213144	10175816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
Isoform_23554_3	chr16	-	3288	7	NNC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	9	-6	intron_retention	FALSE	canonical	0	0	junction_2	2.91070819942883	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTTGTATTTCTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	10265217	10238426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_10240750_10242062_10242123_10243635_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
Isoform_23555_5	chr16	-	3079	8	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	16	-5	intron_retention	FALSE	canonical	0	0	junction_7	3.92792202424786	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265210	10238425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793_10264874_10265088
Isoform_23556_5	chr16	-	3149	6	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	16	-5	intron_retention	FALSE	canonical	1	2	junction_5	3.84707681233427	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGTATTTCTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	10265210	10238425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793
Isoform_23557_3	chr16	-	2933	7	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	16	-6	intron_retention	FALSE	canonical	0	0	junction_6	4.60675832036175	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTTGTATTTCTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	10265210	10238426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793_10264874_10265088
Isoform_23558_41	chr16	-	1420	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	-32	1	-32	-1	multi-exon	FALSE	canonical	3	61	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTTTGCCTTGTCTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	10360950	10348071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10348677_10360135
Isoform_23560_28	chr16	-	1205	2	FSM	ENSMUSG00000038037.6	ENSMUST00000038099.6	2785	2	3	1577	3	-1577	multi-exon	FALSE	canonical	3	9	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603397	10601683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10602786_10603294
Isoform_23563_8	chr16	-	2182	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	15	-222	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGAAAGGCCTTGTGT	NA	False	NA	11	True	AATAAA	-38	NA	10810970	10777360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
Isoform_23565_5	chr16	-	2248	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-15	2	-15	-2	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCCCCATTCATT	NA	False	NA	-13	True	AATAAA	-11	NA	10811000	10777140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_23566_213	chr16	-	2004	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	14	217	14	-217	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCCTTGTGTTGTGT	NA	False	NA	16	True	AATAAA	-43	NA	10810971	10777355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_23567_38	chr16	-	2194	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	42	-1	-8	1	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCCCCATTCATTCTC	NA	False	NA	-10	True	AATAAA	-14	NA	10810943	10777137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_23568_34	chr16	-	2031	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-13	217	-13	-217	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCCTTGTGTTGTGT	NA	False	NA	16	True	AATAAA	-43	NA	10810998	10777355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
Isoform_2357_5	chr10	-	4443	17	ISM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	11193	8	11193	-8	3prime_fragment	FALSE	canonical	0	0	junction_1	17.1755640373177	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTTTTGTGGA	NA	False	NA	-8	True	AATAAA	-13	NA	128414328	128403399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262
Isoform_23573_79	chr16	-	3090	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	-2	7	-2	-7	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTCGAATGTCATT	8532	False	NA	NA	False	AATAAA	-22	NA	10952516	10892781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23576_13	chr16	-	2977	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	28.318898283655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTCGAATGTCATT	8532	False	NA	NA	False	AATAAA	-22	NA	10952516	10892781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23577_3	chr16	-	2838	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	6	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	37.1317307985874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8540	False	NA	NA	False	AATAAA	-21	NA	10952508	10892782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10940533_10940632_10946350_10946568_10952131
Isoform_23578_8	chr16	-	4274	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	-41	15	-2	-15	multi-exon	FALSE	canonical	3	63	junction_3	22.088874288812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAACAAAAAGCTTCTG	8532	False	NA	NA	False	AAAAAG	-22	NA	10952516	10903397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23579_4	chr16	-	4174	7	FSM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-76	-1717	1	1	multi-exon	FALSE	canonical	3	19	junction_2	35.2120560162125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTGAGATTAATGAG	8535	False	NA	NA	False	AATAAA	-15	NA	10952513	10903381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23580_4	chr16	-	2231	5	ISM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-79	16024	-2	1352	5prime_fragment	FALSE	canonical	3	91	junction_1	12.3364297914753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8532	False	NA	NA	False	NA	NA	NA	10952516	10921122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23582_13	chr16	-	1143	5	NIC	ENSMUSG00000022498.17	novel	1145	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	43.4798804046193	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGAACTCTTTATCTCT	8535	False	NA	NA	False	TTTAAA	-7	NA	10952513	10923819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10924136_10934658_10934789_10940533_10940632_10946350_10946568_10952131
Isoform_23583_10	chr16	-	3785	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	30	10	-21	-10	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCATAGTTTTGGTGT	NA	False	NA	-9	True	AATAAA	-18	NA	10994227	10954465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_23584_13	chr16	-	3728	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	82	15	30	-15	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTTCATAGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10994175	10954470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_23586_3	chr16	-	2886	9	ISM	ENSMUSG00000037965.16	ENSMUST00000140755.9	2763	22	1	13380	1	-6	5prime_fragment	FALSE	canonical	3	158	junction_3	8.61593726764535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10994204	10972052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
Isoform_23590_106	chr16	-	1943	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGCTGTACTGTTGGTA	954	False	NA	-5	True	ATTAAA	-23	NA	11021195	11010835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
Isoform_23591_866	chr16	-	1890	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	53	2	-14	-2	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGCTGTACTGTTGGTA	1007	False	NA	-5	True	ATTAAA	-23	NA	11021142	11010835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
Isoform_23612_502	chr16	-	2547	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	61	1108	0	1	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072073	11038263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
Isoform_23613_144	chr16	-	2627	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	-19	1108	-19	1	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072153	11038263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
Isoform_23620_126	chr16	-	2676	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-122	344	-6	5	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGTATTTGAATTGCTT	NA	False	NA	-12	True	AATAAA	-18	NA	11072195	11038259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
Isoform_23623_504	chr16	-	2615	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-65	348	-4	1	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCGGTATTTGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	11072138	11038263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
Isoform_2364_4299	chr10	-	436	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	246	-1	23	1	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	4299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATCGGAGTGTGTTT	NA	False	NA	-11	True	NA	NA	NA	128462370	128460404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
Isoform_23642_40	chr16	-	2677	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	-26	12	-4	-6	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAATAAA	NA	False	NA	-52	True	NA	NA	NA	11727313	11621596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
Isoform_23644_33	chr16	-	2741	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	-39	-39	-17	39	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCTGAATGTTC	NA	False	NA	-1	True	NA	NA	NA	11727326	11621545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
Isoform_23647_238	chr16	-	2870	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	35	1	1	-1	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCCTTTAACTGTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	13485999	13355824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
Isoform_23650_8	chr16	-	1255	3	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	117872	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCCTTTAACTGTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	13367974	13355824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_13356767_13358918_13359113_13367855
Isoform_23651_11	chr16	-	939	4	FSM	ENSMUSG00000022683.14	ENSMUST00000023364.7	1423	4	486	-2	-54	0	multi-exon	FALSE	canonical	3	37	junction_3	8.17856276425687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	0	True	AATAAA	-20	NA	13548361	13532920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13533461_13542972_13543080_13545826_13545978_13548220
Isoform_23652_95	chr16	-	3226	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-4	1006	0	1	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTGCTGTTTGTCT	9984	False	NA	-11	True	NA	NA	NA	13720995	13652017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_23656_8	chr16	-	3805	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-6	429	-2	1	multi-exon	TRUE	canonical	3	113	junction_1	25.0911382243075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTCTGTCTCTGA	9982	False	NA	NA	False	ATTAAA	-10	NA	13720997	13651440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_23658_10	chr16	-	3223	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_22	39.8562160573743	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTGCTGTTTGTCT	9984	False	NA	-11	True	NA	NA	NA	13720995	13652017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
Isoform_23660_5	chr16	-	2895	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-10	-5	-10	0	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTGCTGTTTGTC	9794	False	NA	-12	True	NA	NA	NA	13720895	13652018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_23661_5	chr16	-	2995	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-110	-5	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTGCTGTTTGTC	9984	False	NA	-12	True	NA	NA	NA	13720995	13652018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_23667_6	chr16	-	1210	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	35	9494	31	794	5prime_fragment	FALSE	canonical	3	195	junction_3	12.7342059037853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCTACTTCTGTTGCC	9729	False	NA	NA	False	AATAAA	-16	NA	13720960	13676634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
Isoform_23669_22	chr16	-	3121	10	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	-4	31800	-4	-6	5prime_fragment	TRUE	canonical	3	10	junction_6	4.47213595499958	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAGAAAAAA	9812	False	NA	NA	False	NA	NA	NA	13977135	13958836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
Isoform_23670_4	chr16	-	3815	9	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	8	-9	intron_retention	FALSE	canonical	3	10	junction_6	4.57575130443078	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAATTAAAAAAGAAA	9824	False	NA	NA	False	NA	NA	NA	13977123	13958839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13970577_13971695_13971896_13977007
Isoform_23671_7	chr16	-	2239	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	42	-816	-1	816	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCTTTATGCATTCC	NA	False	NA	-5	True	ATTAAA	-17	NA	14135197	14116291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
Isoform_23672_59	chr16	-	1433	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	31	1	0	-1	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14135208	14117108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
Isoform_23674_3	chr16	-	1348	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	175.075856575244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14135208	14117108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_14118074_14122317_14122452_14131679_14131878_14135157
Isoform_23675_18	chr16	-	1150	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	0	-3	0	-1	multi-exon	FALSE	canonical	3	67	junction_2	185.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14135208	14117108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_14118074_14122317_14122452_14135157
Isoform_23676_3	chr16	-	1973	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-2	-824	1	820	multi-exon	FALSE	canonical	3	67	junction_2	185.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTATGCATTCCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	14135210	14116287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_14118074_14122317_14122452_14135157
Isoform_23677_5	chr16	-	1299	2	ISM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	13	13540	13	1	5prime_fragment	FALSE	canonical	3	312	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGGAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	14135226	14130647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_14131878_14135157
Isoform_23679_8	chr16	-	3413	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	767	-7	-767	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACTTTTCTAGAATTT	NA	False	NA	-2	True	AATAAA	-26	NA	15412361	15371307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_23682_201	chr16	-	1182	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	27	2998	-7	-170	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGTGCTATTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	15412361	15373538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_23683_4	chr16	-	4521	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	21	-335	4	-265	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAAAATGAAGACCAT	NA	False	NA	NA	False	AATAAA	-18	NA	15412367	15370205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
Isoform_23688_22	chr16	-	1057	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	9	170	-8	-170	multi-exon	FALSE	canonical	3	117	junction_1	698.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGTGCTATTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	15412362	15373538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15374408_15398922_15399072_15412323
Isoform_23693_968	chr16	-	3306	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	70	213	70	0	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455194	15441973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_23694_38	chr16	-	3386	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	-10	213	-10	0	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455274	15441973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_23695_19	chr16	-	3556	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	33	0	33	0	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAGTAGGCATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	15455231	15441760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
Isoform_2370_341	chr10	-	3167	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-4	17	-4	-17	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532137	128513060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
Isoform_23700_4	chr16	-	705	4	FSM	ENSMUSG00000022671.14	ENSMUST00000229680.2	1066	4	364	-3	-224	0	multi-exon	FALSE	canonical	2	7	junction_2	282.609664063744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680810	15666306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15666594_15678561_15678635_15680261_15680408_15680611
Isoform_23701_171	chr16	-	634	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	399	2	-226	0	multi-exon	FALSE	canonical	3	566	junction_1	21	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680812	15666306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_23703_39	chr16	-	997	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	36	2	-1	0	multi-exon	FALSE	canonical	3	566	junction_1	21	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681175	15666306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_23704_27	chr16	-	1035	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	-2	2	-2	0	multi-exon	FALSE	canonical	3	566	junction_1	21	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681213	15666306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15666594_15680261_15680408_15680611
Isoform_23705_25	chr16	-	707	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	58	-7	-1	0	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15681175	15666306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
Isoform_23706_146	chr16	-	3260	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	20	2	20	-2	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGTGGTTTTAGTG	1967	False	NA	-2	True	AATAAA	-16	NA	15964695	15707089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
Isoform_23708_9	chr16	-	3181	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-17	-4	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	72.4806487584407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	1977	False	NA	-4	True	AATAAA	-14	NA	15964685	15707091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15958571_15958728_15964608
Isoform_23709_5	chr16	-	3118	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	2	17	junction_13	71.3702958926364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGTGGTTTTAGTG	2008	False	NA	-2	True	AATAAA	-16	NA	15964654	15707089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
Isoform_2371_23	chr10	-	3279	6	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	34	-17	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	69.0408574686033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532092	128513060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128531897
Isoform_23712_71	chr16	-	4061	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176829	16130100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23718_29	chr16	-	3985	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTCTTTCTGATGTGCT	NA	False	NA	-9	True	AATAAA	-27	NA	16176826	16130095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23719_6	chr16	-	4016	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-39	1	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176862	16130100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_2372_20	chr10	-	3324	6	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	69.0408574686033	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	128532137	128513060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128531897
Isoform_23720_11	chr16	-	2865	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-39	-5	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCCTGAAAATTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	16176862	16131251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23723_28	chr16	-	2873	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCTGAAAATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	16176826	16131252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23724_25	chr16	-	4036	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTGATGTGCTTCA	NA	False	NA	-6	True	AATAAA	-30	NA	16176829	16130092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23727_17	chr16	-	3937	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	5	9	-3	-1	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16176818	16130102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
Isoform_23733_4	chr16	-	2415	11	FSM	ENSMUSG00000022783.12	ENSMUST00000023468.6	2416	11	-5	6	2	-6	multi-exon	FALSE	canonical	1	1	junction_3	2.24722050542442	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTAGAATGGTCCCT	NA	False	NA	NA	False	AATAAA	-10	NA	16647182	16570885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16571742_16580885_16581032_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883_16646980_16647058
Isoform_23734_5	chr16	-	749	2	FSM	ENSMUSG00000059305.13	ENSMUST00000232670.2	415	2	-19	-315	-19	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGGTCTGGCTGGTT	NA	False	NA	-3	True	ATTAAA	-12	NA	16688726	16686268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16686843_16688551
Isoform_23738_30	chr16	-	2301	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	25	7	0	-6	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGTGGCGTTCATGA	NA	False	NA	NA	False	AATAAA	-12	NA	16929096	16904425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_2374_28	chr10	-	3145	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-31	0	-30	0	intron_retention	FALSE	canonical	3	682	junction_2	229.276155662894	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8217	False	NA	-21	True	ATTAAA	-15	NA	128540930	128533812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794
Isoform_23740_388	chr16	-	1745	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	10	1333	0	2	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCCAGTTTGAGCCC	NA	False	NA	-33	True	AATAAA	-15	NA	16929096	16906512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_23741_131	chr16	-	1792	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	10	1286	0	4	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGCCGTGGTCTCTGC	NA	False	NA	0	True	NA	NA	NA	16929096	16906465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
Isoform_23742_9	chr16	-	1740	19	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	172.831083238326	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGGTGCCGTGGTCTCT	NA	False	NA	-2	True	NA	NA	NA	16929096	16906467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
Isoform_23746_13	chr16	-	1297	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-31	0	3	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943001	16931261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
Isoform_23747_3	chr16	-	1293	8	NNC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	124.241042875106	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943001	16931261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941515_16942853
Isoform_23748_83	chr16	-	1154	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	3	-1	3	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943001	16931261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
Isoform_23749_17	chr16	-	1176	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	-19	-1	8	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943023	16931261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
Isoform_23750_14	chr16	-	1128	7	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	94.3705756873166	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943001	16931262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942878
Isoform_23751_6	chr16	-	1369	6	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	255	junction_4	29.3011945148999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943001	16931262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942853
Isoform_23752_169	chr16	-	1064	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	43	1	43	-1	multi-exon	FALSE	canonical	2	125	junction_1	37.5	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAGTGCATGAGATGT	NA	False	NA	-11	True	AATAAA	-17	NA	16950204	16948002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16948653_16949460_16949658_16949987
Isoform_23756_156	chr16	-	2587	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	22	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019334	16969878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
Isoform_2376_421	chr10	-	2441	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-35	0	-34	0	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8213	False	NA	-21	True	ATTAAA	-15	NA	128540934	128533812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_23762_282	chr16	-	677	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	22	1910	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019334	16971788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
Isoform_23763_208	chr16	-	699	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	0	1910	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019356	16971788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
Isoform_2377_646	chr10	-	2415	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-3	-6	-2	1	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATCTCTTTCATATT	8245	False	NA	-15	True	ATTAAA	-21	NA	128540902	128533806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_23770_13	chr16	-	6562	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	68	0	68	0	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223689	17098215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
Isoform_23771_17	chr16	-	1118	8	FSM	ENSMUSG00000041720.15	ENSMUST00000231419.2	3855	8	38	2699	38	-2699	multi-exon	FALSE	canonical	3	160	junction_3	18.7442508192648	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGACCTTTTGCTTCTGT	NA	False	NA	-5	True	AATAAA	-21	NA	17223719	17185220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
Isoform_23773_3	chr16	-	983	4	ISM	ENSMUSG00000022760.18	ENSMUST00000232114.2	1120	5	406	-102	-25	-6	3prime_fragment	FALSE	canonical	2	7	junction_3	48.8148429157453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7616	False	NA	-5	True	AATAAA	-13	NA	17348570	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348541
Isoform_23774_8	chr16	-	1029	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	33	-167	-6	-6	multi-exon	FALSE	canonical	3	18	junction_3	43.6882898116494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7564	False	NA	-5	True	AATAAA	-13	NA	17348622	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547
Isoform_23775_6	chr16	-	1168	5	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	40.9206549312202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7258	False	NA	-5	True	AATAAA	-13	NA	17348928	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547_17348722_17348888
Isoform_23776_9	chr16	-	1225	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231288.2	734	4	14	-505	-3	1	multi-exon	FALSE	canonical	3	86	junction_3	13.0724477007517	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTGGCTTGGCTGGA	7281	False	NA	2	True	AATAAA	-20	NA	17348905	17345940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641
Isoform_23777_6	chr16	-	1121	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	-17	6	-9	-6	multi-exon	FALSE	canonical	3	10	junction_4	41.2757495389242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7258	False	NA	-5	True	AATAAA	-13	NA	17348928	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
Isoform_23778_17	chr16	-	1074	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	72	102	-9	-6	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7258	False	NA	-5	True	AATAAA	-13	NA	17348928	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
Isoform_23779_6	chr16	-	1153	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	-2	97	-2	-1	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTTTGGCTTGGCTG	7184	False	NA	0	True	AATAAA	-18	NA	17349002	17345942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
Isoform_23780_4	chr16	-	1071	3	NIC	ENSMUSG00000022760.18	novel	1110	5	NA	NA	0	-3	intron_retention	FALSE	canonical	3	9	junction_2	46	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTTTGGCTTGGC	7275	False	NA	-2	True	AATAAA	-16	NA	17348911	17345944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17346605_17346798_17346940_17348641
Isoform_23781_5	chr16	-	946	2	FSM	ENSMUSG00000022760.18	ENSMUST00000232041.2	766	2	-14	-166	-11	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTGGCTT	7256	False	NA	-5	True	AATAAA	-13	NA	17348930	17345947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17346605_17348641
Isoform_23782_3	chr16	-	2412	6	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	5	1	intron_retention	FALSE	canonical	1	1	junction_4	6.71118469422501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTACACTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	17394530	17390818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17393944_17394068_17394503
Isoform_23783_5	chr16	-	2300	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	50	931	0	1	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTGTGGTATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	17394535	17390812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
Isoform_23784_3	chr16	-	2408	6	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	4	-3	intron_retention	FALSE	canonical	1	1	junction_4	6.71118469422501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGCTGTCATGTACAC	NA	False	NA	NA	False	NA	NA	NA	17394531	17390826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393833_17393944_17394068_17394503
Isoform_23785_4	chr16	-	2294	5	NIC	ENSMUSG00000022756.18	novel	1714	6	NA	NA	-4	4	intron_retention	FALSE	canonical	1	2	junction_4	5.76085931090146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTATTCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	17394523	17390809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393833_17394503
Isoform_23786_36	chr16	-	3353	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	57	0	0	0	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540754	17469074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_23787_7	chr16	-	3149	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTATTGCATCTACCTT	NA	False	NA	-15	True	AATAAA	-24	NA	17540765	17469076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_23788_8	chr16	-	3243	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-3	-10	0	0	multi-exon	TRUE	canonical	3	37	junction_9	64.8068946467118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540764	17469074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_23789_4	chr16	-	1201	4	FSM	ENSMUSG00000012114.18	ENSMUST00000232667.2	1189	4	-11	-1	-1	1	multi-exon	FALSE	canonical	3	249	junction_3	17.4419672692682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCGCAT	NA	False	NA	NA	False	NA	NA	NA	17540765	17500137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17501053_17503316_17503369_17515470_17515559_17540619
Isoform_23790_8	chr16	-	4008	11	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.134167738767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAGCATGGTCAGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	17709565	17658225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677388_17690426_17690550_17709249
Isoform_23791_301	chr16	-	4039	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-40	4	-7	2	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709564	17658222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_23797_193	chr16	-	4033	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	8	4	8	2	multi-exon	TRUE	non_canonical	0	0	junction_7	135.772503989233	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709549	17658222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_23803_14	chr16	-	4060	11	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	165.185986088409	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	17709555	17658224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_23806_16	chr16	-	4067	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.025104152861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGGTCAGTTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	17709551	17658222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_17658451_17658476_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_23807_27	chr16	-	1413	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-12	9025	-12	-69	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTTTACAGTTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	17709536	17667243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
Isoform_23809_17	chr16	-	1434	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	-36	70	8	-70	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGTTTACAGTTTAAC	NA	False	NA	-1	True	AATAAA	-18	NA	17709549	17667244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
Isoform_23810_76	chr16	-	2789	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	-5	1	-5	-1	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTTCTATCAATTG	NA	False	NA	-1	True	NA	NA	NA	17729184	17718573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
Isoform_23812_4	chr16	-	3141	10	NNC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	61.7085943551135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATTTTTCTATCAAT	NA	False	NA	-3	True	NA	NA	NA	17729209	17718575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17728696
Isoform_23813_131	chr16	-	2784	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	36	1	3	-1	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTTTCTATCAATTG	NA	False	NA	-1	True	NA	NA	NA	17729176	17718573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
Isoform_23814_34	chr16	-	1754	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	11	1056	11	1053	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729201	17719628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
Isoform_23815_17	chr16	-	1116	3	FSM	ENSMUSG00000022738.8	ENSMUST00000012279.6	1172	3	50	6	50	-6	multi-exon	FALSE	canonical	3	24	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACAGTCCAGGATTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	17732873	17730976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17731583_17732229_17732484_17732617
Isoform_23817_16	chr16	-	1672	8	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	327	0	-5	0	3prime_fragment	FALSE	canonical	3	1746	junction_4	80.7002516244212	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17745756	17743086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408
Isoform_23819_393	chr16	-	1626	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	40	0	30	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746043	17743086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
Isoform_2382_672	chr10	-	2297	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-58	1	-30	-1	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGAATCTCTTTCATA	8217	False	NA	-17	True	ATTAAA	-19	NA	128540930	128533808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
Isoform_23821_117	chr16	-	1656	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	10	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
Isoform_23825_351	chr16	-	2253	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	129	4	0	-3	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCACCTTTCTCTTGGT	8072	False	NA	-4	True	AATAAA	-16	NA	17907027	17889592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_23826_9	chr16	-	2655	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	102	junction_5	12.5063872570068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8069	False	NA	-3	True	AATAAA	-17	NA	17907030	17889591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_23828_8	chr16	-	2829	12	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-5	intron_retention	FALSE	canonical	3	102	junction_5	11.3705433554579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCATCACCTTTCTCTTG	8072	False	NA	-6	True	AATAAA	-14	NA	17907027	17889594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_23829_5	chr16	-	2158	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.2566176075547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCATCACCTTTCTCTTG	8072	False	NA	-6	True	AATAAA	-14	NA	17907027	17889594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
Isoform_23831_23	chr16	-	3380	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	-3	1491	-3	-726	multi-exon	FALSE	canonical	3	49	junction_5	10.6494131293701	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAAAAATCATTTT	NA	False	NA	-16	True	NA	NA	NA	18053003	18040107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
Isoform_23837_4264	chr16	-	1054	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	29	2	29	-2	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	4264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7162	False	NA	-3	True	AATAAA	-20	NA	18066567	18057649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
Isoform_2386_5	chr10	-	887	4	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	22560	6	9532	-4	3prime_fragment	FALSE	canonical	3	88	junction_2	12.5521135891752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCCCTCCCGCAAGG	8849	False	NA	-16	True	AATAAA	-10	NA	128557384	128556008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046
Isoform_23861_29	chr16	-	4293	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	17	10	2	-10	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGGAATGGCTGGTTT	NA	False	NA	-10	True	CATAAA	-7	NA	18107093	18071821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
Isoform_23864_4	chr16	-	4248	14	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	5	-2	combination_of_known_junctions	TRUE	canonical	3	14	junction_13	51.7107338953916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18107105	18071813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
Isoform_23866_25	chr16	-	1588	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	63.9256159532311	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18161774	18118689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
Isoform_23867_78	chr16	-	1492	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	129	1	1	-1	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTGTTGGCTTTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	18161777	18118691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
Isoform_23868_17	chr16	-	1682	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	76.5371641753207	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTGGCTTTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	18165941	18118689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
Isoform_2387_8	chr10	-	2798	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	39	-3	39	3	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCAAGGTTCTGAGAA	9781	False	NA	-7	True	AATAAA	-19	NA	128579905	128555999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
Isoform_23871_83	chr16	-	1159	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	225	13	225	-13	multi-exon	FALSE	canonical	3	117	junction_5	48.2825020064205	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	4113	False	NA	NA	False	NA	NA	NA	18245129	18226306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_23872_66	chr16	-	1315	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	83	-1	83	1	multi-exon	TRUE	canonical	3	117	junction_5	48.2825020064205	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGGGA	3971	False	NA	NA	False	AAAAAG	-10	NA	18245271	18226292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_23873_23	chr16	-	1351	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	33	13	33	-13	multi-exon	FALSE	canonical	3	117	junction_5	48.2825020064205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	3921	False	NA	NA	False	NA	NA	NA	18245321	18226306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
Isoform_23876_73	chr16	-	1289	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	286	291	38	-13	multi-exon	FALSE	canonical	3	108	junction_4	51.7656981021216	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAGATTTAAAAAAA	3926	False	NA	NA	False	NA	NA	NA	18245316	18226306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
Isoform_2388_8	chr10	-	2866	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	-22	-10	-22	10	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTCTGAGAATTTATTT	9969	False	NA	0	True	AATAAA	-26	NA	128579966	128555992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
Isoform_23880_477	chr16	-	1854	19	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	378	5	-3	1	3prime_fragment	FALSE	canonical	3	368	junction_7	53.1151788307469	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTGGGTCTGTGATC	NA	False	NA	-7	True	AATAAA	-16	NA	18630344	18599201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
Isoform_23883_6	chr16	-	1753	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	2	-8	2	2	multi-exon	TRUE	canonical	3	21	junction_15	122.52143375795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTGTGATCTTATTGG	NA	False	NA	0	True	AATAAA	-23	NA	18630374	18599194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
Isoform_23886_141	chr16	-	776	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	299	205	-24	3	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTATCTGTCTTTTGTTT	NA	False	NA	-21	True	AATAAA	-10	NA	18695313	18690972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_23888_148	chr16	-	748	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	327	205	4	3	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTATCTGTCTTTTGTTT	NA	False	NA	-21	True	AATAAA	-10	NA	18695285	18690972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_23889_94	chr16	-	1047	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	228	5	-25	-5	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATCTGTCGTTTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	18695384	18690772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_23893_6	chr16	-	1350	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	-75	5	-75	-5	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATCTGTCGTTTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	18695687	18690772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
Isoform_23895_70	chr16	-	3210	4	NNC	ENSMUSG00000041205.9	novel	3280	3	NA	NA	32	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.3793987620328	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTATTCAATATTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	20060076	20052058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_20053620_20053651_20054790_20055336_20055455_20059683
Isoform_23897_16	chr16	-	1377	10	FSM	ENSMUSG00000033918.17	ENSMUST00000136252.8	1362	10	-17	2	-1	-2	multi-exon	FALSE	canonical	3	76	junction_6	534.615126360388	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121112	20098571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
Isoform_2390_18	chr10	-	2430	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-95	0	-95	0	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	5642	False	NA	-7	True	AATAAA	-18	NA	128640334	128635904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
Isoform_23900_580	chr16	-	1323	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	23	2	-3	-2	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121114	20098571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
Isoform_23901_9	chr16	-	1278	9	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	575.510208423795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121118	20098571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
Isoform_23902_8	chr16	-	936	7	FSM	ENSMUSG00000033918.17	ENSMUST00000232484.2	848	7	15	-103	-3	-3	multi-exon	FALSE	canonical	3	26	junction_6	637.544682529956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121114	20098572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20120958
Isoform_23903_33	chr16	-	2183	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	64139	2	1751	1	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20181005	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
Isoform_23904_4	chr16	-	2485	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63837	2	1449	1	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20181307	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
Isoform_23906_7	chr16	-	2326	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63996	2	1608	1	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20181148	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
Isoform_23909_15	chr16	-	5715	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	94	2	24	1	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20245050	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_2391_7	chr10	-	2909	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1001	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.3880419739304	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4736	False	NA	-7	True	AATAAA	-18	NA	128641240	128635904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640528
Isoform_23910_8	chr16	-	5767	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	42	2	1	1	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20245102	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_23911_19	chr16	-	3459	16	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1172	1	intron_retention	TRUE	canonical	2	15	junction_15	117.179330752294	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTTGTTGTATAAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	20194220	20150054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20194136
Isoform_23913_318	chr16	-	3171	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-46	3	1	-3	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGCTGTTGGCTCA	NA	False	NA	-2	True	AATAAA	-44	NA	20534913	20521716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23915_6	chr16	-	3370	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-243	1	-196	-1	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGCTGTTGGCTCATA	NA	False	NA	0	True	AATAAA	-38	NA	20535110	20521714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23916_27	chr16	-	3069	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	55.8162014750864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGCTGTTGGCTCA	NA	False	NA	-2	True	AATAAA	-44	NA	20534922	20521716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23918_6	chr16	-	2958	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	57.1271598864692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534915	20521717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_2392_4	chr10	-	2026	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-9	15	-9	-15	intron_retention	FALSE	canonical	3	748	junction_2	69	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGACAGAGAGATTTTC	NA	False	NA	-8	True	AATAAA	-30	NA	128657484	128654365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128654885_128655822_128655975_128656129
Isoform_23920_5	chr16	-	3501	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-6	intron_retention	FALSE	canonical	3	159	junction_9	36.3188360391639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534912	20521719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23921_5	chr16	-	3464	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-1	0	intron_retention	TRUE	canonical	3	33	junction_16	54.027177886812	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534915	20521713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23924_21	chr16	-	3137	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	59.9737718155622	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGCTGTTGGCTCA	NA	False	NA	-2	True	AATAAA	-44	NA	20534939	20521716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
Isoform_23927_12	chr16	-	5122	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	41	1	5	-1	multi-exon	FALSE	canonical	3	80	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACTGCCGTTGGGGTT	NA	False	NA	NA	False	AATAAA	-23	NA	21513374	21467795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21472509_21512965
Isoform_23928_3	chr16	-	5182	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	-20	2	-20	-2	multi-exon	FALSE	canonical	3	80	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACTGCCGTTGGGGT	NA	False	NA	NA	False	AATAAA	-22	NA	21513435	21467796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21472509_21512965
Isoform_23929_3	chr16	-	1791	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	-28	40	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAACCCTTCAGCCTTCT	NA	False	NA	43	True	NA	NA	NA	21513443	21495431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_21496745_21512965
Isoform_23930_3	chr16	-	1725	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	-3	35	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGAGTAAACCCTTCAGC	NA	False	NA	38	True	NA	NA	NA	21513382	21495436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_21496745_21512965
Isoform_23931_3	chr16	-	2983	7	NNC	ENSMUSG00000022853.8	novel	2981	7	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.40307743817094	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGTAAAAAACTGTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	21606554	21580032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_21582087_21584975_21585318_21589165_21589271_21592243_21592357_21594094_21594262_21596548_21596653_21606456
Isoform_23932_77	chr16	-	1359	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	1	0	1	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9191	False	NA	-2	True	ATTAAA	-16	NA	21766301	21753075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
Isoform_23934_9	chr16	-	1205	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	-20	-1	1	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9191	False	NA	-2	True	ATTAAA	-16	NA	21766301	21753075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
Isoform_23936_4	chr16	-	2062	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11332	1581	-7578	-5	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAGAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21803081	21774147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
Isoform_23937_4	chr16	-	2541	9	ISM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	11339	1095	-7571	475	3prime_fragment	FALSE	canonical	3	141	junction_8	24.9821811497715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTGCCTGTTAGAGGAA	NA	False	NA	-28	True	AATACA	-12	NA	21803074	21773661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650
Isoform_23940_104	chr16	-	2045	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	1722	6	45	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGCTTTCCTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	21814257	21774288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_23941_65	chr16	-	2688	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	1079	6	491	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTAATGTTAATATTTA	NA	False	NA	-12	True	AATACA	-28	NA	21814257	21773645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_23943_4	chr16	-	2707	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	124	1092	-26	478	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCCTGTTAGAGGAATTA	NA	False	NA	-25	True	AATACA	-15	NA	21814289	21773658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_23946_5	chr16	-	3303	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	464	6	-464	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGCGTGTGTTTGTATT	NA	False	NA	NA	False	TTTAAA	-21	NA	21814257	21773030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_23948_10	chr16	-	2114	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	93	1716	-57	51	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTCCTGGACTGTTT	NA	False	NA	NA	False	NA	NA	NA	21814320	21774282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_23949_6	chr16	-	2238	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	104	1581	-46	-5	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAGAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21814309	21774147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_2395_71	chr10	-	922	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	31	-229	-8	-12	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAGAGATTTTCTCA	NA	False	NA	-5	True	AATAAA	-33	NA	128657483	128654362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
Isoform_23950_4	chr16	-	2581	9	FSM	ENSMUSG00000044626.14	ENSMUST00000074230.12	2051	9	-51	-479	11	479	multi-exon	FALSE	canonical	3	14	junction_5	59.399994739057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21814252	21773657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21794982_21795085_21800085_21800195_21802650_21803019_21814070
Isoform_2396_49	chr10	-	999	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	-305	-9	64	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657484	128654286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
Isoform_23960_20	chr16	-	3637	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	259	3	-21	-3	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGGTGTCTTGGTGT	2532	False	NA	NA	False	AATATA	-13	NA	21981790	21877761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
Isoform_23964_31	chr16	-	2405	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	583	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
Isoform_23967_41	chr16	-	2392	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	0	-705	0	691	multi-exon	TRUE	canonical	3	442	junction_8	660.884723143114	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084676	22064506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
Isoform_23968_93	chr16	-	2284	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	0	-597	0	583	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
Isoform_2397_107	chr10	-	1002	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-21	592	-9	-12	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAGAGATTTTCTCA	NA	False	NA	-5	True	AATAAA	-33	NA	128657484	128654362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
Isoform_23973_322	chr16	-	2116	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	79	1208	0	691	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084676	22064506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_23976_801	chr16	-	2008	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	79	1316	0	583	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_2398_64	chr10	-	1058	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-1	516	-1	64	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTCTCTACTCCTT	NA	False	NA	-1	True	TATAAA	-16	NA	128657464	128654286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
Isoform_23990_128	chr16	-	2005	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	583	at_least_one_novel_splicesite	FALSE	canonical	3	309	junction_2	620.677741968407	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGTTGGTTTTCTTT	NA	False	NA	-22	True	AATAAA	-36	NA	22084676	22064614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_23991_43	chr16	-	2113	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	691	at_least_one_novel_splicesite	TRUE	canonical	3	309	junction_2	620.677741968407	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGGCCAAGTAGAA	NA	False	NA	-17	True	ATTAAA	-12	NA	22084676	22064506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
Isoform_24_616	ERCC-00009	+	966	1	FSM	ERCC-00009A	DQ668364	968	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00009_+_0_1000
Isoform_24003_457	chr16	-	3220	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24706	-7	-9979	0	3prime_fragment	FALSE	canonical	3	940	junction_4	61.8456860976486	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	-13	True	AATAAA	-22	NA	22230558	22200058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
Isoform_24004_478	chr16	-	3159	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24767	-7	-9918	0	3prime_fragment	TRUE	canonical	3	940	junction_4	61.8456860976486	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	-13	True	AATAAA	-22	NA	22230497	22200058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
Isoform_24015_80	chr16	-	3872	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	103	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	7589	False	NA	-13	True	AATAAA	-22	NA	22258366	22200058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
Isoform_2402_5	chr10	-	753	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	-33	-54	-18	-16	multi-exon	FALSE	canonical	3	26	junction_2	430	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGGACAGAGAGATTTT	NA	False	NA	-9	True	AATAAA	-29	NA	128657493	128654366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128654885_128655822_128655975_128657410
Isoform_24021_9	chr16	-	3261	8	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGCCAGAGTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	22676289	22631965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_24022_7	chr16	-	3229	8	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-26	-59	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676320	22632028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_24023_19	chr16	-	2672	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	2	0	-2	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGCCAGAGTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	22676290	22631965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_24024_23	chr16	-	2615	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	123	65	-2	-59	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676296	22632028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_24026_14	chr16	-	2524	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	125	-4	0	-2	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGCCAGAGTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	22676292	22631965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24028_32	chr16	-	2463	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	123	59	0	-59	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676294	22632028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24029_4	chr16	-	2675	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-29	-1	-27	1	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676446	22631968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_2403_17	chr10	-	723	3	ISM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	474	1	-24	-1	3prime_fragment	FALSE	canonical	3	559	junction_1	44.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTGTTTGAAGGA	NA	False	NA	-2	True	AATAAA	-18	NA	128758919	128755783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_128755977_128756427_128756561_128758522
Isoform_24030_5	chr16	-	2622	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-36	59	-34	-59	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAACTTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-6	NA	22676453	22632028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24031_10	chr16	-	3061	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	0	-430	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676292	22636592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_24032_4	chr16	-	3231	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	0	-262	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGAGTCTGAGTG	NA	False	NA	NA	False	AAGAAA	-7	NA	22676294	22636424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_24033_33	chr16	-	2471	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	127	4629	0	-430	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676292	22636592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_24034_11	chr16	-	2634	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	4464	0	-265	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATATGAGTCTGA	NA	False	NA	NA	False	AAGAAA	-4	NA	22676290	22636427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
Isoform_24036_21	chr16	-	2323	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	121	4625	-2	-432	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATAGAGCATTATTAATA	NA	False	NA	NA	False	AATAAA	-19	NA	22676296	22636594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24037_7	chr16	-	2471	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-25	4623	-23	-430	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGAGCATTATTAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	22676442	22636592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24038_4	chr16	-	2376	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	125	4568	0	-375	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACTAGATGAAAGTCA	NA	False	NA	NA	False	AATAAA	-36	NA	22676292	22636537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24039_3	chr16	-	2490	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	121	4458	-2	-265	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATATGAGTCTGA	NA	False	NA	NA	False	AAGAAA	-4	NA	22676296	22636427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_2404_208	chr10	-	509	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	42	-1	42	1	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	False	NA	0	True	AATAAA	-20	NA	128759351	128755781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
Isoform_24040_3	chr16	-	2319	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	32	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.6037765074465	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGTCACATAGAGCAT	NA	False	NA	NA	False	AATAAA	-11	NA	22663361	22636602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22663305
Isoform_24041_6	chr16	-	1953	4	FSM	ENSMUSG00000004462.8	ENSMUST00000232251.2	790	4	-690	-473	-11	-21	multi-exon	FALSE	canonical	3	22	junction_3	44.1688678696759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGGAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	22676305	22644265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22644883_22652627_22652784_22660478_22660858_22675504
Isoform_24042_3	chr16	-	1201	4	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	119	12301	-4	-26	5prime_fragment	FALSE	canonical	3	49	junction_3	31.4783876475414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGTAAAAATAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	22676298	22644270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676244
Isoform_24043_9	chr16	-	1264	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	-31	True	AATAAA	-18	NA	22946457	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
Isoform_24046_331	chr16	-	1224	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-3	7	-3	1	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTGAATATACAATT	NA	False	NA	-33	True	AATAAA	-16	NA	22946490	22932699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
Isoform_24047_375	chr16	-	1200	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	21	7	1	1	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTGAATATACAATT	NA	False	NA	-33	True	AATAAA	-16	NA	22946466	22932699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
Isoform_24054_29	chr16	-	3096	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-44	3	-44	-3	multi-exon	FALSE	canonical	3	119	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTTGTCATTATTA	4753	False	NA	-3	True	AATAAA	-21	NA	28748469	28644930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_28647762_28748204
Isoform_24057_4	chr16	-	2040	2	FSM	ENSMUSG00000052316.10	ENSMUST00000064606.8	5310	2	-2	3272	-2	-3272	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	30102076	30091391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_30093341_30101985
Isoform_24058_9	chr16	-	2152	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCTCACGGTGGAGA	NA	False	NA	NA	False	AATAAA	-19	NA	30369388	30332786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_24059_3	chr16	-	2430	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCTCGGCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30369388	30332508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_2406_61	chr10	-	621	3	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAACCAAAACAGAA	NA	False	NA	-62	True	NA	NA	NA	21934509	21930798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_21931017_21933427_21933570_21934248
Isoform_24060_15	chr16	-	2119	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	8	278	0	1	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCTCACGGTGGAGA	NA	False	NA	NA	False	AATAAA	-19	NA	30369388	30332786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
Isoform_24061_169	chr16	-	2301	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	4	875	1	2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406406	30380186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
Isoform_24065_7	chr16	-	2284	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	141.24916086047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406371	30380186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400979_30401348_30401470_30404371_30404499_30406255
Isoform_24068_134	chr16	-	3453	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	15	2	15	-2	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTACAGTGTCTTCTGTT	NA	False	NA	-7	True	ATTAAA	-10	NA	30900235	30773963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
Isoform_24072_4	chr16	-	3483	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-69	0	14	0	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATCTTGTGTACTAT	NA	False	NA	NA	False	AATAAA	-19	NA	31020049	30914233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
Isoform_24076_80	chr16	-	2394	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-9	1693	-9	-1693	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	NA	False	NA	-14	True	AATAAA	-16	NA	31094104	31072047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_24077_4	chr16	-	2570	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	37	1471	37	-1471	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCTGCTTTTAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	31094058	31071825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_24078_89	chr16	-	1565	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	16	2497	16	-2497	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTGCTTGTCTTCGT	NA	False	NA	-5	True	AATAAA	-38	NA	31094079	31072851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_2408_6	chr10	-	1924	7	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	29	junction_1	68.5727513099935	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTTGTTTTTAT	NA	False	NA	-3	True	TATAAA	-20	NA	115198125	115176645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
Isoform_24083_69	chr16	-	1149	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-269	78	16	-78	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTTGTTGTTTG	NA	False	NA	-5	True	ATTAAA	-16	NA	31094079	31076870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_24085_4	chr16	-	1245	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-294	7	-9	-7	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAACTGTTTTGCTTTG	NA	False	NA	66	True	ATTAAA	-31	NA	31094104	31076799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
Isoform_24091_20	chr16	-	965	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	51	-37	51	3	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8761	False	NA	-1	True	AATAAA	-15	NA	31133361	31115936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
Isoform_24092_16	chr16	-	935	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	212	927	-2	3	multi-exon	FALSE	canonical	3	43	junction_5	47.7887015935775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	-1	True	AATAAA	-15	NA	31133414	31115936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
Isoform_24093_6	chr16	-	865	5	FSM	ENSMUSG00000022548.15	ENSMUST00000115230.2	1070	5	208	-3	-2	3	multi-exon	FALSE	canonical	2	5	junction_4	68.1725751310598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8708	False	NA	-1	True	AATAAA	-15	NA	31133414	31115936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133369
Isoform_24094_5	chr16	-	3353	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	138	2841	14	-7	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAATTTTCTTGGATTT	NA	False	NA	NA	False	CATAAA	-15	NA	31821967	31781330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
Isoform_24095_5	chr16	-	2267	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	14	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTTTTTAATTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	31821967	31794635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
Isoform_24096_3	chr16	-	2183	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	3	-106	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATTGATAAGCCTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	31821993	31794745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
Isoform_241_140	SIRV1	-	743	3	FSM	SIRV1A	SIRV107	744	3	1	0	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11642	10647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_-_10792_10882_11243_11403
Isoform_2410_13	chr10	-	1844	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	63.4967458590901	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGACTTGTTTTGTTTTT	NA	False	NA	-5	True	TATAAA	-18	NA	115198139	115176647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
Isoform_24100_55	chr16	-	4158	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	3	1580	3	-1580	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAATTGTATGAATTGA	NA	False	NA	-5	True	ATTAAA	-19	NA	31898157	31836687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
Isoform_24101_10	chr16	-	5743	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-3	1	-3	-1	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAATTTCCATTTTTGT	NA	False	NA	-11	True	AATAAA	-21	NA	31898163	31835108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
Isoform_2411_8	chr10	-	591	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	693	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	24.9131825880731	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109562	34106209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_34106388_34106902_34107071_34107314_34107400_34109402
Isoform_24112_5	chr16	-	1121	7	NIC	ENSMUSG00000023791.19	novel	982	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	171.687377391454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918522	31903235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918287
Isoform_24113_45	chr16	-	985	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	15	-7	4	-1	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918541	31903234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
Isoform_24115_18	chr16	-	986	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	-3	-1	-2	-1	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTTTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-29	NA	31918548	31903234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
Isoform_24116_3	chr16	-	907	5	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	167.537309277665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTAGTTTGTCTTC	NA	False	NA	-3	True	AATAAA	-27	NA	31918529	31903236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918287
Isoform_24117_3	chr16	-	916	5	NIC	ENSMUSG00000023791.19	novel	982	6	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	179.165251932399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918547	31903239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918293
Isoform_24118_4	chr16	-	758	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	-7	-38	-3	-1	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTGGTTAGTTTGTCT	NA	False	NA	-5	True	AATAAA	-25	NA	31918532	31903238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
Isoform_24119_19	chr16	-	2430	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	109	9	0	1	multi-exon	FALSE	canonical	2	4	junction_2	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAAATGCATCTTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	31984294	31961611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31963824_31966370_31966492_31984197
Isoform_2412_5	chr10	-	611	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	693	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	34.5671648951558	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109562	34106209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_34106388_34106902_34107071_34107314_34107420_34109402
Isoform_24120_4	chr16	-	2513	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	-2	37	-2	3	multi-exon	FALSE	canonical	2	4	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGGTGTGCCTCATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	31984405	31961639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31963824_31966370_31966492_31984197
Isoform_24122_13	chr16	-	1422	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	176	1020	0	-1	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACACTGCTTCTGTTGG	NA	False	NA	-9	True	AATAAA	-26	NA	32306521	32294341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
Isoform_24125_23	chr16	-	5237	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	13	7	0	-7	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATCTTGCCTTTTAT	NA	False	NA	-42	True	AATAAA	-8	NA	32688708	32642104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_24127_10	chr16	-	5240	19	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-6	-9	intron_retention	FALSE	canonical	0	0	junction_13	16.6851749085347	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAAATCTTGCCTTTT	NA	False	NA	-44	True	AATAAA	-6	NA	32688715	32642106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663900_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_24129_3	chr16	-	2269	10	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	10	13794	-2	3	5prime_fragment	FALSE	canonical	3	55	junction_7	8.88194172964949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	ATTAAA	-30	NA	32688711	32655891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
Isoform_2413_11	chr10	-	506	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	693	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	27.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109562	34106209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_34106388_34106902_34107071_34109402
Isoform_24130_5	chr16	-	759	4	FSM	ENSMUSG00000035578.17	ENSMUST00000133219.2	442	4	5	-322	5	-8	multi-exon	FALSE	canonical	1	1	junction_3	27.6043474836845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	NA	False	NA	-6	True	ATTAAA	-21	NA	32844302	32836997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32844213
Isoform_24131_3	chr16	-	1402	9	ISM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	6237	3945	-83	-8	3prime_fragment	TRUE	canonical	3	14	junction_7	20.3838171106395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	7409	False	NA	-6	True	ATTAAA	-21	NA	32870323	32836997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221
Isoform_24132_8	chr16	-	1274	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6385	-8	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	6105	False	NA	-6	True	ATTAAA	-21	NA	32863855	32836997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
Isoform_24133_3	chr16	-	2488	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6385	1206	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGCAATGAAAAAGGCT	6105	False	NA	NA	False	AATAAA	-18	NA	32863855	32835783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
Isoform_24134_9	chr16	-	711	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	-46	0	6	0	multi-exon	FALSE	canonical	3	19	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	33201091	33200223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33200729_33200885
Isoform_24135_19	chr16	-	732	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	6	-1	6	0	multi-exon	FALSE	canonical	3	44	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	33201091	33200223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33200750_33200885
Isoform_24138_135	chr16	-	3447	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	2	0	-2	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8675	False	NA	NA	False	NA	NA	NA	33787373	33775153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_24141_623	chr16	-	1635	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	1814	0	-1802	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
Isoform_24144_17	chr16	-	1480	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	0	1803	0	-1803	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
Isoform_24147_4	chr16	-	2672	16	FSM	ENSMUSG00000061751.17	ENSMUST00000232157.2	2690	16	19	-1	19	1	multi-exon	FALSE	canonical	3	12	junction_2	6.74157910944379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTTAATGAGGTCAA	NA	False	NA	-9	True	AATAAA	-13	NA	33916379	33833514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
Isoform_24148_7	chr16	-	2698	16	NNC	ENSMUSG00000061751.17	novel	2690	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	6.90700127889569	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCAAAGGTTAGTTGA	NA	False	NA	2	True	AATAAA	-24	NA	33916397	33833503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
Isoform_2415_8	chr10	-	3118	2	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAAGACCCGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	74555796	74550617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_74551462_74553522
Isoform_24150_94	chr16	-	1648	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	66	2278	0	655	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTCTTCCAAATTCTT	NA	False	NA	-21	True	AATACA	-16	NA	35184222	35133778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
Isoform_24153_3	chr16	-	1448	6	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	0	654	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	33.9611542795589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTCTTCCAAATTCT	NA	False	NA	-22	True	AATACA	-15	NA	35184222	35133779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35184193
Isoform_24154_7	chr16	-	1304	5	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-15	655	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	36.3077126792642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTCTTCCAAATTCTT	NA	False	NA	-21	True	AATACA	-16	NA	35184237	35133778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35181930_35182130_35184193
Isoform_24155_3	chr16	-	1186	4	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-15	653	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.2626483512709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGTCTTCCAAATTC	NA	False	NA	-23	True	AATACA	-14	NA	35184237	35133780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_35134658_35139173_35139240_35181930_35182130_35184193
Isoform_24156_7	chr16	-	1804	17	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	137.923835412883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAGTATGTTTTCAC	NA	False	NA	-6	True	AATAAA	-18	NA	35311253	35217677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
Isoform_24158_510	chr16	-	1823	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-10	-4	-10	4	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAGTATGTTTTCAC	NA	False	NA	-6	True	AATAAA	-18	NA	35311253	35217677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
Isoform_2416_12	chr10	-	1095	2	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	8422233	8419968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_8421034_8422203
Isoform_24161_228	chr16	-	2088	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-12	3319	-12	167	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTACTTTTAACCAGGT	NA	False	NA	-13	True	AATAAA	-17	NA	35589738	35517750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_24162_18	chr16	-	2518	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-12	2889	-12	597	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGCCAATACCTATT	NA	False	NA	1	True	AATATA	-38	NA	35589738	35517320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_24163_16	chr16	-	2254	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-168	3309	-168	177	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGTTGGAAGCCTT	NA	False	NA	-3	True	AATAAA	-27	NA	35589894	35517740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_24164_16	chr16	-	2551	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	0	2844	0	642	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	46	True	TATAAA	-14	NA	35589726	35517275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
Isoform_24165_5	chr16	-	2633	3	FSM	ENSMUSG00000049502.18	ENSMUST00000114885.3	2649	3	16	0	16	0	multi-exon	FALSE	canonical	3	12	junction_1	10	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTCATGTCTTTTTA	10010	False	NA	NA	False	NA	NA	NA	35759505	35752229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35754170_35756746_35756998_35759063
Isoform_24168_264	chr16	-	670	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-42	90	37	-4	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGACTTGTCTTTGTT	NA	False	NA	-10	True	AATACA	-9	NA	35891927	35864220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
Isoform_24170_13	chr16	-	855	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-227	90	-148	-4	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGACTTGTCTTTGTT	NA	False	NA	-10	True	AATACA	-9	NA	35892112	35864220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
Isoform_24171_142	chr16	-	2987	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	86	11	73	-11	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACTAAAGAGGTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37360065	37330162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
Isoform_24172_127	chr16	-	3064	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	9	11	-4	-11	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACTAAAGAGGTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	37360142	37330162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
Isoform_24176_1093	chr16	-	452	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	86	433	-1	-2	multi-exon	FALSE	canonical	3	6062	junction_1	348	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	-4	True	AATAAA	-21	NA	37474729	37467964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_37468082_37469375_37469523_37474541
Isoform_24177_295	chr16	-	481	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	57	433	-30	-2	multi-exon	FALSE	canonical	3	6062	junction_1	348	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	-4	True	AATAAA	-21	NA	37474758	37467964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_37468082_37469375_37469523_37474541
Isoform_24179_7	chr16	-	892	4	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	37254	2	36923	-2	3prime_fragment	FALSE	canonical	3	28	junction_1	8.01387685344754	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACGTTGTTTGTAAAG	NA	False	NA	-5	True	AATAAA	-14	NA	38125251	38118117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140
Isoform_2418_5	chr10	-	660	6	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	4	-1598	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	144.804696056447	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	62628061	62617842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_62618072_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
Isoform_24180_5	chr16	-	1540	8	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	23134	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	14.2571142284282	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38139040	38118115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38138841
Isoform_24181_96	chr16	-	877	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25459	1	10108	-1	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38228048	38216479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
Isoform_24182_5	chr16	-	1742	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	231	1	231	-1	multi-exon	FALSE	canonical	2	3	junction_9	86.6256313108309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38253276	38216479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
Isoform_24183_19	chr16	-	878	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10108	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	83.929658047677	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228048	38216482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_38216898_38217700_38217866_38221233_38221347_38225898_38225989_38227953
Isoform_24184_3	chr16	-	1729	4	NIC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10056	-4	intron_retention	FALSE	canonical	3	158	junction_1	29.1699998095456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228100	38216482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_38217866_38221237_38221347_38225898_38225989_38227953
Isoform_24185_3	chr16	-	1712	4	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10077	-4	intron_retention	FALSE	canonical	3	14	junction_1	96.5965262775473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228079	38216482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_38217866_38221233_38221347_38225898_38225989_38227953
Isoform_2419_4	chr10	-	692	2	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCCTACTGTGTGGACT	7406	False	NA	25	True	NA	NA	NA	82756739	82753704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_82754279_82756621
Isoform_24191_1664	chr16	-	1544	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	45	1377	24	-1377	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTTGTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38273020	38265768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
Isoform_24192_65	chr16	-	1645	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	-56	1377	-56	-1377	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTTGTCTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38273121	38265768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
Isoform_24199_7	chr16	-	2088	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	-12	-503	-12	503	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTGCTCAGTTTTAAA	NA	False	NA	-1	True	ATTAAA	-19	NA	38343037	38318205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
Isoform_242_1086	SIRV1	+	463	3	FSM	SIRV1B	SIRV109	464	3	1	0	1	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10712	11643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_+_10792_10882_11058_11434
Isoform_2420_3	chr10	-	609	2	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGATGTTTTGTTTGT	7412	False	NA	0	True	TTTAAA	-36	NA	82756733	82753729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_82754279_82756673
Isoform_24201_93	chr16	-	1554	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	35	-16	13	16	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	NA	False	NA	0	True	AGTAAA	-38	NA	38342990	38318692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
Isoform_24202_28	chr16	-	2303	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	40	16	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	6306	False	NA	0	True	AGTAAA	-38	NA	38370544	38318692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24205_15	chr16	-	2350	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	-7	16	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCATGCCTCAGTCT	6259	False	NA	0	True	AGTAAA	-38	NA	38370591	38318692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24210_291	chr16	-	2681	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	76	1	40	-1	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6306	False	NA	-2	True	NA	NA	NA	38370544	38345499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24212_147	chr16	-	2756	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	76	-74	40	74	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTACTTGGTGAG	6306	False	NA	-4	True	AATATA	-21	NA	38370544	38345424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24214_21	chr16	-	2610	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	4	144	4	-141	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGCCTGTGTACCT	6234	False	NA	-3	True	TTTAAA	-23	NA	38370616	38345642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24215_17	chr16	-	2742	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	15	1	15	-1	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6245	False	NA	-2	True	NA	NA	NA	38370605	38345499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_24216_10	chr16	-	2844	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	-10	-76	-10	76	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTACTTGGTGAGCC	6220	False	NA	-2	True	AATATA	-23	NA	38370630	38345422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
Isoform_2422_3	chr10	-	2870	11	NNC	ENSMUSG00000020130.10	novel	492	5	NA	NA	38	-6144	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	134.870493437223	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTCTAGTGGCTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	115087334	115050534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
Isoform_24220_26	chr16	-	2969	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	40	-87	40	84	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTGAGCCTGGAAAAG	6306	False	NA	6	True	AATATA	-31	NA	38370544	38345414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
Isoform_24222_80	chr16	-	2893	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	31	-2	31	-1	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6297	False	NA	-2	True	NA	NA	NA	38370553	38345499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
Isoform_24225_28	chr16	-	3040	9	NIC	ENSMUSG00000022704.17	novel	1457	9	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710019	43681776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
Isoform_24226_66	chr16	-	3034	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	10	-7	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCCGCTGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	43710038	43681776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
Isoform_24228_3	chr16	-	2966	8	NIC	ENSMUSG00000022704.17	novel	1457	9	NA	NA	-4	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	56.4948977288016	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43710023	43681777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43700661_43700718_43701330_43701577_43709929
Isoform_2423_3	chr10	-	893	2	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	130378112	130363810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_130364392_130377800
Isoform_24232_3	chr16	-	3005	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	1200	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCCTTGGCCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	43800154	43788240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
Isoform_24244_39	chr16	-	3941	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	287	6	0	-6	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACTTTTCTTTCCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	43959381	43905770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
Isoform_24254_11	chr16	-	1072	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	17	2326	13	48	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAGCTGGCTTTTCTA	NA	False	NA	-24	True	ATTAAA	-21	NA	44566709	44559456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
Isoform_24255_4	chr16	-	1188	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	12	2215	8	159	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTACTGTCTTCAATT	NA	False	NA	87	True	TATAAA	-32	NA	44566714	44559345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
Isoform_24256_3	chr16	-	871	6	FSM	ENSMUSG00000022668.11	ENSMUST00000023348.11	836	6	12	-47	12	47	multi-exon	FALSE	canonical	3	17	junction_5	38.0473389345431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTAGCTGGCTTTTCT	NA	False	NA	-25	True	ATTAAA	-20	NA	44566710	44559457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566562
Isoform_24257_8	chr16	-	2946	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	47	1240	-4	1133	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTGTACTATG	NA	False	NA	-13	True	ATTAAA	-17	NA	44979022	44961175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
Isoform_24258_8	chr16	-	2319	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	35	-7	0	7	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTCTCTATGC	NA	False	NA	NA	False	AATAAA	-14	NA	45229381	45202490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
Isoform_24259_33	chr16	-	1029	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	211	0	211	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45544760	45531592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
Isoform_24260_3	chr16	-	2858	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAGTCCTGTGCATTCT	NA	False	NA	0	True	NA	NA	NA	45563281	45550082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24261_7	chr16	-	1250	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-11	175	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTGCCTTTCTT	NA	False	NA	-31	True	ATTAAA	-21	NA	45563329	45551738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24262_18	chr16	-	2810	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	33	5	-15	-5	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563285	45550092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24263_23	chr16	-	1262	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	37	1549	-11	277	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATGGAAGTTTGTAAA	NA	False	NA	12	True	AATAAA	-33	NA	45563281	45551636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24264_70	chr16	-	1160	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	37	1651	-11	175	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTGCCTTTCTT	NA	False	NA	-31	True	ATTAAA	-21	NA	45563281	45551738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24265_16	chr16	-	1193	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	1	1654	1	172	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGATGTTTGCCTTT	NA	False	NA	-34	True	ATTAAA	-18	NA	45563317	45551741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24267_19	chr16	-	1381	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	43	1424	-5	402	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGCCATGCTATATTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	45563275	45551511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24269_4	chr16	-	1297	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-18	1569	-18	257	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGTCTGGTACCAT	NA	False	NA	-8	True	AATAAA	-13	NA	45563336	45551656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24270_4	chr16	-	1432	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-11	1427	-11	399	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTGCCATGCTATATT	NA	False	NA	NA	False	AATAAA	-11	NA	45563329	45551514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24271_4	chr16	-	2845	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-2	5	-2	-5	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563320	45550092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
Isoform_24272_5	chr16	-	2607	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGTATGGTGAGTCC	NA	False	NA	-10	True	NA	NA	NA	45563266	45550092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_24274_3	chr16	-	1322	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	12	496	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATGGGAATCTTCCAG	NA	False	NA	NA	False	NA	NA	NA	45563306	45551417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_24275_9	chr16	-	961	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	175	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTGCCTTTCTT	NA	False	NA	-31	True	ATTAAA	-21	NA	45563266	45551738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_24276_7	chr16	-	1042	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	1	258	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGTCTGGTACCATT	NA	False	NA	-7	True	AATAAA	-14	NA	45563264	45551655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
Isoform_24278_5	chr16	-	4510	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	33	940	-2	-23	multi-exon	TRUE	canonical	3	48	junction_15	7.72315083521806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAACCAAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	45664708	45567545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
Isoform_24281_3	chr16	-	2485	2	ISM	ENSMUSG00000033149.18	ENSMUST00000076333.12	5347	19	-130	77374	14	2037	5prime_fragment	FALSE	canonical	3	73	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTCTCAATCGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	45664727	45644130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_45646459_45664570
Isoform_24282_8	chr16	-	2179	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-34	917	-34	-917	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAACAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-36	NA	46317364	46268448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
Isoform_24283_11	chr16	-	2579	21	ISM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	223	17916	-1	3394	5prime_fragment	FALSE	canonical	3	63	junction_8	17.0155076327449	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATCAAAAAGAAAGAAAAGA	4420	False	NA	NA	False	AAAACA	-33	NA	48814305	48762510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_24284_14	chr16	-	2189	16	ISM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	223	24173	-1	-2863	5prime_fragment	FALSE	canonical	3	63	junction_3	18.6599988090985	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTTATTAAATTTAA	4420	False	NA	NA	False	NA	NA	NA	48814305	48768767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_24285_6	chr16	-	1571	15	ISM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-1	22526	-1	-2863	5prime_fragment	FALSE	canonical	3	44	junction_2	22.4353947764578	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTTATTAAATTTAA	4420	False	NA	NA	False	NA	NA	NA	48814305	48768767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
Isoform_24286_3	chr16	-	2447	13	ISM	ENSMUSG00000022641.16	ENSMUST00000089399.11	2539	14	-20	10022	-4	-1943	5prime_fragment	FALSE	canonical	1	5	junction_11	3.66192875711997	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGAAGAAGACTGG	9710	False	NA	NA	False	AATATA	-39	NA	50252757	50040862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
Isoform_2429_332	chr10	+	3656	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	8	5	-5	-5	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTGTTCAGCTAGTAA	NA	False	NA	9	True	AATAAA	-14	NA	3923125	4106106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
Isoform_24290_4	chr16	-	3625	12	FSM	ENSMUSG00000035356.18	ENSMUST00000114458.8	3627	12	0	2	0	1	multi-exon	FALSE	canonical	1	2	junction_4	2.64418901313618	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTCTTTTCTAGTG	NA	False	NA	-12	True	AATAAA	-15	NA	55642501	55631739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55636827_55637193_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
Isoform_24291_12	chr16	-	2850	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	-1	5062	-1	1	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTACACCAATAATGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	55755219	55725312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
Isoform_24292_96	chr16	-	2188	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	12	0	2	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850047	55835868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
Isoform_24298_24	chr16	-	2383	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850069	55835871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
Isoform_243_74	SIRV1	+	701	3	FSM	SIRV1B	SIRV108	702	3	1	0	1	0	multi-exon	FALSE	canonical	3	89	junction_1	13	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10583	11606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV1_+_10792_10897_11188_11403
Isoform_2430_88	chr10	+	3697	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-26	-2	-26	2	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTAGTAAAGCCACT	NA	False	NA	16	True	AATAAA	-21	NA	3923091	4106113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
Isoform_24301_399	chr16	-	2237	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	55	3	2	-3	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850047	55835871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_24303_13	chr16	-	2293	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	1	1	1	-1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850101	55835869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_24310_89	chr16	-	2435	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-5	-1492	5	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850044	55835869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
Isoform_24315_16	chr16	-	645	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	-10	157	0	-157	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCACATTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-35	NA	55850069	55838639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
Isoform_24316_193	chr16	-	1849	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	48	1105	48	-1105	multi-exon	FALSE	canonical	3	404	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGAATATCAGACTTT	7434	False	NA	1	True	AATAAA	-27	NA	55858134	55854076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55855655_55857863
Isoform_24317_7	chr16	-	2286	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	44	672	44	-672	multi-exon	FALSE	canonical	3	404	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAAAATGTGTCTGG	7430	False	NA	NA	False	AATAAA	-12	NA	55858138	55853643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55855655_55857863
Isoform_24320_31	chr16	-	1941	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	3	1	3	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537810	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24321_100	chr16	-	1788	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	156	1	17	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537657	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24322_91	chr16	-	1886	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	58	1	-32	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537755	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24323_3	chr16	-	2047	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	-105	3	-105	-3	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGTCTTGTTGCCT	NA	False	NA	-3	True	AATAAA	-13	NA	56537918	56510697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24324_9	chr16	-	1933	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537814	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24325_11	chr16	-	1863	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537744	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24326_14	chr16	-	1805	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537686	56510695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
Isoform_24327_5	chr16	-	1592	6	FSM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	3	1106	3	223	multi-exon	FALSE	canonical	1	3	junction_5	1.32664991614216	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTCATTTTTTTTTTC	6305	False	NA	NA	False	AATAAA	-31	NA	56706526	56626629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56706175
Isoform_24329_156	chr16	-	1065	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	242	-12	-102	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTTGGTAACAATG	NA	False	NA	-31	True	ATTAAA	-18	NA	56987716	56977269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
Isoform_2433_166	chr10	+	3565	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-31	1	-5	-1	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTCAGCTAGTAAAGCC	NA	False	NA	13	True	AATAAA	-18	NA	3923112	4106110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
Isoform_24330_54	chr16	-	1304	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	3	-12	-2	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTGATGTTTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	56987716	56977030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
Isoform_24332_63	chr16	-	3573	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	114	3	-17	-3	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051753	56989227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
Isoform_24334_10	chr16	-	3677	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	10	3	10	-3	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	57051857	56989227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
Isoform_24335_17	chr16	-	2018	4	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	3683	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	80.5536398239638	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGCCCTGGAGGAT	NA	False	NA	-7	True	AATAAA	-19	NA	56994936	56989227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56994825
Isoform_24338_182	chr16	-	1105	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	43	2	-27	-2	multi-exon	TRUE	canonical	3	200	junction_5	24.152805731247	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACAGTTTCTCTTTCCC	NA	False	NA	-11	True	AATAAA	-30	NA	57427166	57122364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
Isoform_24339_7	chr16	-	1783	2	FSM	ENSMUSG00000022748.9	ENSMUST00000231282.2	610	2	-75	-1098	-5	1098	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57427214	57263757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_57265355_57427028
Isoform_24340_14	chr16	-	529	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	-3	3	-3	-3	multi-exon	FALSE	canonical	3	94	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTATTTATGTTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	57427230	57381798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_57382126_57427028
Isoform_24341_4	chr16	-	1581	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-261	376	-37	3	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTAGAGTGTTCTGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	59459791	59433687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_24342_62	chr16	-	1312	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	11	373	11	6	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGAGTGTTCTGTTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	59459519	59433684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
Isoform_24343_3	chr16	-	3558	6	FSM	ENSMUSG00000050312.13	ENSMUST00000143314.8	3565	6	9	-2	-2	2	multi-exon	TRUE	canonical	3	19	junction_4	5.49181208709839	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTTTTTTTGACCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	62607131	62552804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596747_62606150_62606261_62607033
Isoform_24344_5	chr16	-	1122	7	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	-13	10361	-13	7804	5prime_fragment	FALSE	canonical	3	43	junction_1	7.97217382873427	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAAAGAAGCAGA	NA	False	NA	NA	False	TATAAA	-43	NA	62667416	62624408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
Isoform_24345_10	chr16	-	1081	6	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	11	12857	11	5308	5prime_fragment	FALSE	canonical	3	47	junction_5	7.11617874986288	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAGTTGTGGCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	62667392	62626904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
Isoform_24346_75	chr16	-	1351	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	203	3968	203	-3968	multi-exon	FALSE	canonical	3	170	junction_1	18.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTGTGTGCCTTAGAA	NA	False	NA	-18	True	AATAAA	-20	NA	64591321	64586466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64587357_64589286_64589526_64591099
Isoform_24347_9	chr16	-	1726	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	203	3593	203	-3593	multi-exon	FALSE	canonical	3	170	junction_1	18.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTTTACTGCTTAGAC	NA	False	NA	-1	True	AATAAA	-17	NA	64591321	64586091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64587357_64589286_64589526_64591099
Isoform_24349_4	chr16	-	1926	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	201	3395	201	-3395	multi-exon	FALSE	canonical	3	170	junction_1	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAACAAAGCCCATTTA	NA	False	NA	NA	False	NA	NA	NA	64591323	64585893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64587357_64589286_64589526_64591099
Isoform_24351_8	chr16	-	3837	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-84	2508	-84	-2504	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAATTTGTTTTCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	64672099	64603217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_24352_5	chr16	-	3907	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-155	2509	-155	-2505	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672170	64603218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_24353_4	chr16	-	5237	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-97	1121	-97	-1117	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCTGTTTGGAAACT	NA	False	NA	NA	False	ATTAAA	-16	NA	64672112	64601830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
Isoform_24356_49	chr16	-	1849	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	21	2	21	-2	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGCCTAACGCGCAT	NA	False	NA	-10	True	AATAAA	-17	NA	65359591	65336015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
Isoform_24360_6	chr16	-	4034	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	30	173	0	-173	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATATTGTTTTCTATCT	4011	False	NA	-3	True	AATAAA	-20	NA	75563679	75552082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
Isoform_24362_3	chr16	-	4672	4	NIC	ENSMUSG00000048490.15	novel	4529	4	NA	NA	-23	123	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCCAGAAG	NA	False	NA	9	True	NA	NA	NA	76169960	76087626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_76091904_76127633_76127753_76149359_76149435_76169759
Isoform_24363_7	chr16	-	4651	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	1	-123	1	123	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCCAGAAG	NA	False	NA	9	True	NA	NA	NA	76169936	76087626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
Isoform_24367_6	chr16	-	4703	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-59	-115	-59	115	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAGGAAAAAAAAAAAAA	NA	False	NA	1	True	NA	NA	NA	76169996	76087634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
Isoform_24370_4	chr16	-	3513	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	76	-2175	76	2175	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTTTTGCAGTCTAT	NA	False	NA	NA	False	AATAAA	-11	NA	78173622	78154572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
Isoform_24371_87	chr16	-	1383	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	28	3	28	-3	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTGTGGTTTTGTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	78173670	78156750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
Isoform_24376_7	chr16	-	3024	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-116	3219	-65	-14	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGGGAAAAAGAAAAAAAA	3127	False	NA	NA	False	AAGAAA	-32	NA	78373661	78340444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_24379_20	chr16	-	2919	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-4	3212	-4	-7	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3239	False	NA	NA	False	AAGAAA	-39	NA	78373549	78340437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
Isoform_24384_5	chr16	-	2706	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	2	-1132	2	-14	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGGGAAAAAGAAAAAAAA	3245	False	NA	NA	False	AAGAAA	-32	NA	78373543	78340444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
Isoform_24389_8	chr16	-	2681	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	1	-1411	1	-7	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3244	False	NA	NA	False	AAGAAA	-39	NA	78373544	78340437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_24390_4	chr16	-	2739	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-64	-1404	-13	-14	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGGGAAAAAGAAAAAAAA	3179	False	NA	NA	False	AAGAAA	-32	NA	78373609	78340444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
Isoform_24393_6	chr16	-	2639	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-9	14	1	-14	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGGGAAAAAGAAAAAAAA	3244	False	NA	NA	False	AAGAAA	-32	NA	78373544	78340444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_24395_4	chr16	-	2688	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-51	7	10	-7	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	3202	False	NA	NA	False	AAGAAA	-39	NA	78373586	78340437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
Isoform_24399_288	chr16	-	1079	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	509	706	-3	-706	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTTTGTCCCTGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	84532121	84515169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
Isoform_24401_4	chr16	-	1222	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-3	-706	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	318.128827076837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTTTGTCCCTGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	84532121	84515169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531151_84531502_84532041
Isoform_24404_57	chr16	-	533	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	646	0	-25	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
Isoform_24405_1629	chr16	-	478	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	768	0	-25	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	1629	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
Isoform_24407_119	chr16	-	590	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	654	2	34	1	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTCCTTTAAATT	NA	False	NA	-4	True	AATAAA	-16	NA	84631859	84624760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
Isoform_24411_5	chr16	-	3187	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	22	4958	-5	1	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATTAAAAAAAA	7345	False	NA	NA	False	NA	NA	NA	84970632	84751530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24412_6	chr16	-	3147	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	62	4958	0	1	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATTAAAAAAAA	7385	False	NA	NA	False	NA	NA	NA	84970592	84751530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24413_6	chr16	-	3321	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	62	4784	0	-19	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATTAAATAAAATA	7385	False	NA	-32	True	NA	NA	NA	84970592	84751356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24416_5	chr16	-	3095	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	28	-3	0	3	multi-exon	FALSE	canonical	3	10	junction_10	13.879925927396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAAAAAAAT	7382	False	NA	NA	False	NA	NA	NA	84970595	84751528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24417_3	chr16	-	3126	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	51	-1	0	1	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGACGTTTCTTTGAAGG	7382	False	NA	-5	True	AATAAA	-20	NA	84970595	84751329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24418_3	chr16	-	2933	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	45	198	-6	3	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAAAAAAAT	7376	False	NA	NA	False	NA	NA	NA	84970601	84751528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
Isoform_24420_12	chr16	-	5636	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	86	2021	37	-2021	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTCTAAATTATAGA	NA	False	NA	-6	True	AATAAA	-15	NA	87229414	87175559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
Isoform_24425_90	chr16	-	1999	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	5	5	5	-5	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTGCTTGTTATC	NA	False	NA	-9	True	AATAAA	-12	NA	87237456	87230299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
Isoform_24436_1754	chr16	-	1846	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	545	3	117	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGTTTAATCACTCACA	NA	False	NA	-20	True	AATAAA	-18	NA	87292758	87280758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
Isoform_24437_104	chr16	-	2391	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	3	0	3	0	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGTGAACATAATTTAT	NA	False	NA	-13	True	AATAAA	-28	NA	87292758	87280213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
Isoform_24448_3	chr16	-	4306	20	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	58.24796549893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGTTAATGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	90081317	90025843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24449_11	chr16	-	4368	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	44.5324743781235	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081379	90025840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24451_4	chr16	-	4354	20	FSM	ENSMUSG00000022983.17	ENSMUST00000232371.2	4367	20	17	-4	17	-2	multi-exon	FALSE	canonical	3	36	junction_10	57.9041619122408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081374	90025840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24452_14	chr16	-	4350	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-177	2	18	-2	multi-exon	TRUE	canonical	3	110	junction_9	44.050650776067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081373	90025840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24453_4	chr16	-	4431	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	59.596240748535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081374	90025841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24454_7	chr16	-	4419	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-51	-102	27	-2	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081364	90025840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24455_6	chr16	-	4407	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081364	90025840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
Isoform_24456_75	chr16	-	1292	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	42	-1	42	1	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-26	NA	90524250	90516198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
Isoform_24457_3	chr16	-	7359	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	-19	4	2	-4	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGCTTTTGTACTTT	8660	False	NA	-14	True	AATAAA	-12	NA	90607299	90548418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
Isoform_24458_248	chr16	-	1086	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	300	44	12	-44	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAATGTTTTAGGACA	NA	False	NA	-42	True	AATAAA	-11	NA	90731702	90722740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
Isoform_24460_3	chr16	-	2699	20	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-44	80	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	9.62078774252418	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGACAAAAAATTTATA	2352	False	NA	NA	False	NA	NA	NA	90808045	90757299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
Isoform_24461_3	chr16	-	2447	17	ISM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	1943	907	1564	-28	3prime_fragment	FALSE	canonical	3	98	junction_10	95.3346080917103	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCGTGTCCTTAAATG	NA	False	NA	-21	True	AATATA	-33	NA	90839488	90811831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440
Isoform_24462_10	chr16	-	471	2	ISM	ENSMUSG00000022974.13	ENSMUST00000127002.2	1415	8	-80	11076	-80	-11076	5prime_fragment	FALSE	canonical	3	191	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAGTTAAATTGCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	90841322	90839527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_90839570_90840893
Isoform_24464_109	chr16	-	2230	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	116	1	-20	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	91394572	91371391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
Isoform_24465_34	chr16	-	2272	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	74	1	-62	-1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	91394614	91371391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
Isoform_24467_4	chr16	-	1883	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	-2	1487	-2	1096	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCAAAAGAACAAAGGAAG	9247	False	NA	NA	False	AATGAA	-10	NA	91415889	91412628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91414268_91415645
Isoform_24488_333	chr16	-	3275	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	2	-1	0	1	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443817	91418290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
Isoform_24489_36	chr16	-	3433	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	68	junction_21	407.127507368682	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443815	91418290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
Isoform_24490_918	chr16	-	3276	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	25	217	-2	1	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACTTATCTAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	91443815	91418290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
Isoform_24500_58	chr16	-	1852	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	-4	4	0	-4	multi-exon	FALSE	canonical	3	460	junction_10	453.295984981116	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTGTTTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	91443817	91430296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
Isoform_24506_118	chr16	-	1867	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-6	4	-6	-4	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTGTTTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	91443829	91430296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
Isoform_24514_77	chr16	-	2377	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	1	-13	1	13	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAGTGCTTAGTTAT	NA	False	NA	12	True	AATAAA	-32	NA	91485657	91476139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
Isoform_24519_238	chr16	-	1459	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	369	137	2	67	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCATTTGATTTTGTTA	9197	False	NA	-7	True	AATACA	-26	NA	91525494	91486346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24526_29	chr16	-	1596	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	369	0	2	0	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTGAATTTCTCCGA	9197	False	NA	NA	False	TTTAAA	-18	NA	91525494	91486209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24531_11	chr16	-	1622	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	203	140	30	64	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACGTCATTTGATTTTG	9031	False	NA	-10	True	AATACA	-23	NA	91525660	91486349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_2454_85	chr10	+	6211	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-17	1	-17	-1	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4216362	4309469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
Isoform_24542_20	chr16	-	937	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	96	121	3	-115	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTCTAGAGTACATTT	9198	False	NA	1	True	AATAAA	-24	NA	91525493	91491346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24543_11	chr16	-	1068	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	84	2	6	-2	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTCTTTTTTCTCTTTT	9186	False	NA	NA	False	AATAAA	-22	NA	91525505	91491227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24544_15	chr16	-	1544	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	358	5137	6	-115	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTCTAGAGTACATTT	9186	False	NA	1	True	AATAAA	-24	NA	91525505	91491346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24545_9	chr16	-	1712	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	308	5019	34	-3	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTCTTTTTTCTCTTT	9136	False	NA	NA	False	AATAAA	-21	NA	91525555	91491228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24550_34	chr16	-	605	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-19	176	4	-176	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTGTGTACTCG	9184	False	NA	NA	False	TATAAA	-19	NA	91525507	91503906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
Isoform_24558_302	chr16	-	771	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	62	5	62	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	873	False	NA	-6	True	AATAAA	-15	NA	91728513	91722106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
Isoform_24559_3285	chr16	-	719	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	114	5	-22	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCGTGAGGAGCCTTGT	925	False	NA	-6	True	AATAAA	-15	NA	91728461	91722106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
Isoform_24564_24	chr16	-	2189	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	3	-2	3	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92196962	92188840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
Isoform_24565_471	chr16	-	2317	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	4	-2	4	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92263027	92188840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
Isoform_24566_109	chr16	-	2433	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-111	2	-111	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92263145	92188842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
Isoform_24570_4	chr16	-	767	3	FSM	ENSMUSG00000022948.17	ENSMUST00000233981.2	744	3	-27	4	-27	-1	multi-exon	FALSE	canonical	3	131	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCATTTGCAGACTGTC	NA	False	NA	-8	True	AATAAA	-14	NA	93383546	93380351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_93380573_93382066_93382191_93383124
Isoform_24571_14	chr16	-	1749	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGCAGACTGTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	93400703	93380349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
Isoform_24573_8	chr16	-	1589	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGCAGACTGTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	93400951	93380349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
Isoform_24574_4	chr16	-	1230	9	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	42.4365334941486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCATTTGCAGACTGTC	NA	False	NA	-8	True	AATAAA	-14	NA	93400705	93380351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93393185_93393224_93396099_93396196_93398525_93398687_93400453
Isoform_24576_4	chr16	-	2019	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-336	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAATACACCTTTAAAT	6235	False	NA	NA	False	AATAAA	-24	NA	93592125	93589027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_24577_6	chr16	-	1847	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAATACACCTTTAAAT	6407	False	NA	NA	False	AATAAA	-24	NA	93591953	93589027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_24578_7	chr16	-	1695	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAATACACCTTTAAAT	6559	False	NA	NA	False	AATAAA	-24	NA	93591801	93589027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_24579_3	chr16	-	2557	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-18	852	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGTTCACAT	6553	False	NA	NA	False	NA	NA	NA	93591807	93588171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_24580_3	chr16	-	1899	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-159	53	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGTGAGTGACCAGCC	6412	False	NA	NA	False	ATTAAA	-14	NA	93591948	93588970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_93590271_93590397_93590505_93591456
Isoform_24581_7	chr16	-	4063	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-3	-39	-3	39	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACGTGTGTTTGAGGG	NA	False	NA	NA	False	AATAAA	-30	NA	94091148	93931231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_24582_3	chr16	-	5252	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-14	-1217	-14	111	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94091159	93930053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_24583_4	chr16	-	2523	10	ISM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	7	2526	7	65	5prime_fragment	FALSE	canonical	3	37	junction_4	4.93913572686508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTCTGATAGTTTATT	NA	False	NA	NA	False	TTTAAA	-34	NA	94091138	93933796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
Isoform_24584_10	chr16	-	1164	4	FSM	ENSMUSG00000022940.18	ENSMUST00000138514.2	695	4	-215	-254	-12	0	multi-exon	FALSE	canonical	3	395	junction_3	26.0298973404728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171583	94165310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
Isoform_24585_3	chr16	-	1009	4	FSM	ENSMUSG00000022940.18	ENSMUST00000138514.2	695	4	-239	-75	-36	4	multi-exon	FALSE	canonical	3	395	junction_3	26.0298973404728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTACAGTTGTGGGCTG	NA	False	NA	-4	True	TATAAA	-15	NA	94171607	94165489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
Isoform_24587_37	chr16	-	804	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	157	5	-28	0	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171396	94165310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
Isoform_24588_5	chr16	-	930	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	35	1	35	-1	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAGTAGATCTATATG	NA	False	NA	NA	False	AATAAA	-27	NA	94171518	94165306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
Isoform_2459_17	chr10	+	5955	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	0	1	0	-1	multi-exon	FALSE	canonical	3	114	junction_1	774.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4284544	4309469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_4284710_4303141_4307940_4308477
Isoform_24590_38	chr16	-	736	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171567	94165310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
Isoform_24592_7	chr16	-	746	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	4	8	4	-3	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCAACCTTGAGTAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	94171870	94165313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
Isoform_24593_385	chr16	-	2146	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	396	5	-2	-5	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGGTTTGGACTGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	94327293	94298646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_24594_58	chr16	-	2203	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	396	-52	-2	52	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAATGTGTTCCTCAGT	NA	False	NA	-5	True	AGTAAA	-13	NA	94327293	94298589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_24595_13	chr16	-	2345	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	188	14	188	-14	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTTTTTAATGGTTT	NA	False	NA	-27	True	AATAAA	-9	NA	94327501	94298655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
Isoform_24602_376	chr16	-	987	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	49	8	-21	-8	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAATTGTAACTTTAT	NA	False	NA	-18	True	AATAAA	-8	NA	95792111	95781140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
Isoform_24604_47	chr16	-	2895	23	ISM	ENSMUSG00000022914.18	ENSMUST00000232755.2	9843	41	-13	36623	-13	-32	5prime_fragment	TRUE	canonical	3	75	junction_10	134.456327973924	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGGAAAGAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	95883660	95837093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_24605_25	chr16	-	2994	23	ISM	ENSMUSG00000022914.18	ENSMUST00000232755.2	9843	41	-112	36623	-33	-32	5prime_fragment	FALSE	canonical	3	75	junction_10	134.456327973924	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGGAAAGAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	95883759	95837093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_24608_6	chr16	-	2393	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	-17	6	-17	-6	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACGTAAGTATTCTAT	NA	False	NA	39	True	AATAAA	-11	NA	95883743	95867873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
Isoform_24612_1448	chr16	-	1181	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	23	970	23	646	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928906	95922787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
Isoform_24613_447	chr16	-	1203	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	1	970	1	646	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928928	95922787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
Isoform_24622_4	chr16	-	820	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGTCACAGGAGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	97313744	97272289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
Isoform_24623_50	chr16	-	3578	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	12	1	12	-1	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGCAGACTATTATTTCT	NA	False	NA	1	True	AATAAA	-21	NA	97564975	97543133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
Isoform_24624_71	chr16	-	2985	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	28	3543	1	-1	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTAAGTGTGTTCTATG	NA	False	NA	-6	True	ATTAAA	-11	NA	97723805	97659951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_24625_4	chr16	-	3919	15	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-7	917	at_least_one_novel_splicesite	TRUE	non_canonical	1	3	junction_1	25.3763508738642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTCCTTGTCCACTGA	NA	False	NA	NA	False	NA	NA	NA	97723840	97659032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_97659711_97659730_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_24628_3	chr16	-	1333	7	ISM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	30	26273	3	-19	5prime_fragment	FALSE	canonical	3	55	junction_3	16.6799946709291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAAAGAAATGAAAACA	NA	False	NA	NA	False	AAGAAA	-6	NA	97723803	97682681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
Isoform_24629_23	chr16	-	3076	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-9	5	-3	-2	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	False	NA	-6	True	AATAAA	-22	NA	97763818	97750965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
Isoform_24630_9	chr16	-	2931	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_97752070_97752669_97754294_97763613
Isoform_24631_6	chr16	-	2851	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTGGGATGAATTAA	NA	False	NA	-2	True	AATAAA	-26	NA	97763831	97750961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_97752070_97752669_97754294_97763712
Isoform_24632_6	chr16	-	3667	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231263.2	889	3	-14	-2764	0	-2	multi-exon	FALSE	canonical	2	6	junction_2	40	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	False	NA	-6	True	AATAAA	-22	NA	97763815	97750965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97754294_97757957_97758095_97763613
Isoform_24633_47	chr16	-	3674	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	6	2330	0	-1	multi-exon	FALSE	canonical	3	60	junction_2	13	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763815	97750964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97754294_97757957_97758101_97763613
Isoform_24634_8	chr16	-	3581	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231560.2	397	3	1	-3185	0	-1	multi-exon	FALSE	canonical	2	12	junction_2	37	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763821	97750964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97754294_97757957_97758101_97763712
Isoform_24635_27	chr16	-	3534	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	-3	1932	-3	-1	multi-exon	FALSE	canonical	3	32	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTTTGGGATGAAT	NA	False	NA	-5	True	AATAAA	-23	NA	97763818	97750964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_97754294_97763613
Isoform_24636_15	chr16	-	3436	2	NIC	ENSMUSG00000046962.17	novel	6010	3	NA	NA	0	-3	intron_retention	FALSE	canonical	3	25	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTAAGTTTGGGATGA	NA	False	NA	-7	True	AATAAA	-21	NA	97763821	97750966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_97754294_97763712
Isoform_24638_8	chr16	-	595	2	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCAGTAGTGCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	20273124	20270693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_20271065_20272900
Isoform_24641_3	chr16	-	940	4	NNC	ENSMUSG00000023791.19	novel	670	2	NA	NA	2	-2151	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	180.697414357692	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTAGCTCTTGCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	31918554	31908470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_31908938_31911161_31911304_31915817_31915882_31918287
Isoform_24642_5	chr16	-	2080	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	14	-5108	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTGCTGCTGTTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	43800140	43794616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_43796109_43799270_43799540_43799821
Isoform_24643_7	chr16	-	785	3	NNC	ENSMUSG00000002846.10	novel	678	3	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	92	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATTTTAGTATTTAATA	NA	False	NA	-3	True	ATTAAA	-20	NA	38343016	38337020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_38337326_38338728_38338895_38342702
Isoform_24644_3	chr16	-	613	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-8	-42820	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	174.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	8610180	8566643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_8566919_8574679_8574937_8610099
Isoform_24645_5	chr16	-	1044	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	90.516419627724	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245049	20219510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_20219785_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
Isoform_24646_4	chr16	-	1394	10	NNC	ENSMUSG00000022889.8	novel	523	2	NA	NA	-3	-1489	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	317.758740688515	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGGCTTCTGAGCT	NA	False	NA	NA	False	TATAAA	-17	NA	84532121	84515952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_-_84516371_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
Isoform_24648_111	chr16	+	3219	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	23	-1	23	1	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAATATGTATAAATC	NA	False	NA	4	True	AATAAA	-13	NA	3561979	3568646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
Isoform_24649_6	chr16	+	3999	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	-144	1	-5	-1	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTATAAATCTTTATTG	NA	False	NA	11	True	AATAAA	-20	NA	3561951	3568653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
Isoform_24655_32	chr16	+	1620	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	158	1	-56	-1	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGCTGCTATTATTA	3252	False	NA	6	True	AATACA	-16	NA	3726846	3759010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
Isoform_24656_25	chr16	+	3595	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	5	19	5	-4	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTTTCTGCACGTGC	NA	False	NA	17	True	AATAAA	-11	NA	4412581	4433802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
Isoform_24657_3	chr16	+	1833	8	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-6	227	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	45.2088125777915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATCGCTAGAATATTT	NA	False	NA	NA	False	AATAAA	-24	NA	4412570	4443015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4439472_4439571_4442333
Isoform_24660_615	chr16	+	2600	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	39	9	-5	-9	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501972	4525550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
Isoform_24663_1711	chr16	+	2477	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	19	9	0	-9	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501978	4525550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
Isoform_24664_33	chr16	+	2499	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	-3	9	-3	-9	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTGTGGTCATT	NA	False	NA	26	True	NA	NA	NA	4501956	4525550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
Isoform_24672_13	chr16	+	1710	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	20	0	20	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCTGTGATTTTTCCT	NA	False	NA	9	True	CATAAA	-17	NA	4544246	4584606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_24673_252	chr16	+	1202	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	35	493	35	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544261	4584113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_24674_3	chr16	+	1097	5	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	172.281020428833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544247	4584113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4544336_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_24675_6	chr16	+	1292	6	NIC	ENSMUSG00000004070.16	novel	1392	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	152.242438235861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4574827	4584113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4574992_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
Isoform_24678_19	chr16	+	3140	17	FSM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	-15	-875	1	0	multi-exon	FALSE	canonical	3	40	junction_1	129.828191757415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_24680_57	chr16	+	3094	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2929	False	NA	14	True	AATAAA	-15	NA	4704117	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_24683_44	chr16	+	3204	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_24685_80	chr16	+	3157	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2929	False	NA	14	True	AATAAA	-15	NA	4704117	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_24688_184	chr16	+	3138	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
Isoform_24690_260	chr16	+	3095	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	1	-1	1	0	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2925	False	NA	14	True	AATAAA	-15	NA	4704113	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_24691_68	chr16	+	3140	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	-44	-1	-44	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2880	False	NA	14	True	AATAAA	-15	NA	4704068	4756160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
Isoform_24694_12	chr16	+	1825	2	FSM	ENSMUSG00000022516.11	ENSMUST00000230224.2	660	2	-16	-1149	0	1	multi-exon	FALSE	canonical	3	563	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	95	False	NA	13	True	AATAAA	-19	NA	4756975	4758884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4757158_4757241
Isoform_24695_240	chr16	+	1262	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	358	-2	-3	2	multi-exon	FALSE	canonical	3	527	junction_2	18	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTCTGAGTGCCATG	102	False	NA	14	True	AATAAA	-20	NA	4756982	4758885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4757158_4757241_4757503_4758059
Isoform_24696_3	chr16	+	1140	3	NNC	ENSMUSG00000022516.11	novel	1162	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTCATGTTGCTTCTG	95	False	NA	5	True	AATAAA	-11	NA	4756975	4758876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_4757158_4757241_4757503_4758179
Isoform_24697_3	chr16	+	1349	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	-17	-3	-7	0	multi-exon	FALSE	canonical	3	15	junction_2	274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	88	False	NA	12	True	AATAAA	-18	NA	4756968	4758883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4757158_4757241_4757578_4758059
Isoform_24698_5	chr16	+	433	4	FSM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	-36	2	0	1	multi-exon	FALSE	canonical	3	31	junction_1	9.41629792788369	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGAGTCTGGACTGTG	NA	False	NA	9	True	NA	NA	NA	4825179	4826171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_4825283_4825607_4825753_4825835_4825919_4826069
Isoform_24702_12	chr16	+	1337	6	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	20	22591	9	127	5prime_fragment	FALSE	canonical	3	57	junction_2	12.6427845034233	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGATAAAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4867940	4881562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536
Isoform_24703_7	chr16	+	1387	6	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	-30	22591	-30	127	5prime_fragment	FALSE	canonical	3	57	junction_2	12.6427845034233	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGATAAAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4867890	4881562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536
Isoform_24704_173	chr16	+	1754	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	4	-3	4	3	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGTGTTTGCTCTGAG	1284	False	NA	20	True	AATAAA	-21	NA	5051488	5062770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
Isoform_24706_92	chr16	+	1348	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-8	485	-8	3	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCCCTTGAGATGCT	NA	False	NA	6	True	AATAAA	-15	NA	8288643	8308063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
Isoform_24708_18	chr16	+	1308	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-8	4	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8288643	8308064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
Isoform_24709_22	chr16	+	2368	2	FSM	ENSMUSG00000022711.17	ENSMUST00000143174.2	2370	2	-14	16	1	-16	multi-exon	FALSE	canonical	3	199	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	8455587	8462864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8455693_8460601
Isoform_24710_28	chr16	+	1812	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	50	-20	1	20	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGATCTTGCTGAT	NA	False	NA	37	True	AATAAA	-44	NA	8455587	8475415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
Isoform_24711_8	chr16	+	1791	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	36	14795	36	-4	5prime_fragment	FALSE	canonical	3	177	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTCCGTGTCATA	9980	False	NA	4	True	AATAAA	-15	NA	8647999	8661991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_8648550_8649184_8649266_8660831
Isoform_24712_39	chr16	+	3315	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	36	721	36	-721	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTTACTTTTTTCCA	9980	False	NA	22	True	ATTAAA	-17	NA	8647999	8676065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_24716_6	chr16	+	3346	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-4	730	-4	-730	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTAGCACTGGTTAC	9940	False	NA	13	True	ATTAAA	-8	NA	8647959	8676056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_24718_7	chr16	+	4034	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	33	5	33	-5	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAACAGGGGCTTGT	9977	False	NA	5	True	AATAAA	-16	NA	8647996	8676781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
Isoform_24719_104	chr16	+	506	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	12	287	12	-6	multi-exon	FALSE	canonical	3	487	junction_1	5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGCTTCTGTGTTA	NA	False	NA	23	True	AATAAA	-23	NA	9988103	9992488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_9988189_9988278_9988356_9992144
Isoform_24720_9	chr16	+	769	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	30	6	30	-6	multi-exon	FALSE	canonical	3	487	junction_1	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAATAATTGCTCTCT	NA	False	NA	62	True	NA	NA	NA	9988121	9992769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_9988189_9988278_9988356_9992144
Isoform_24722_27	chr16	+	2545	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	236	-3	1	3	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
Isoform_24723_8	chr16	+	3252	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010780	10060915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
Isoform_24724_12	chr16	+	2159	11	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	955	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	41.4305442880009	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCTTGAGTGGCAT	NA	False	NA	3	True	ATTAAA	-8	NA	10010811	10070297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
Isoform_24726_458	chr16	+	2120	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-8	9	-8	-9	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAAGGCTTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	10229803	10242283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_24727_101	chr16	+	3012	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-9	-882	-9	882	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	10229802	10243174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_24728_29	chr16	+	2179	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-67	9	-67	-9	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAAGGCTTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	10229744	10242283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_24733_16	chr16	+	2743	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	699	junction_1	79.9631087779365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAAGGCTTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	10229807	10242283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
Isoform_24736_3	chr16	+	1521	2	ISM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	25	2145	4	1562	5prime_fragment	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTAATCCTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	10363265	10379164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_10363507_10377884
Isoform_24737_3	chr16	+	3724	21	ISM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	4	49149	4	1	5prime_fragment	FALSE	canonical	3	10	junction_9	19.7111009332305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATGTGATGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	10363231	10513593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483
Isoform_24738_4	chr16	+	3746	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	55	2412	10	1	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCGGAGTCTCATTAGA	NA	False	NA	NA	False	AAAAAG	-19	NA	10363282	10560330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
Isoform_24739_3	chr16	+	3667	22	NIC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	3	-1	combination_of_known_splicesites	TRUE	canonical	1	1	junction_16	19.8333190418973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCGGAGTCTCATTA	NA	False	NA	NA	False	AAAAAG	-17	NA	10363230	10560328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
Isoform_24740_52	chr16	+	812	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	12	2918	3	-2918	multi-exon	FALSE	canonical	3	158	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTGAATTTCAGTTTG	NA	False	NA	6	True	NA	NA	NA	10652934	10658184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10653255_10657692
Isoform_24741_24	chr16	+	867	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	11	2864	2	-2864	multi-exon	TRUE	canonical	3	158	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCATAGTGGCCTGCC	NA	False	NA	11	True	ATTAAA	-19	NA	10652933	10658238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10653255_10657692
Isoform_24743_13	chr16	+	2876	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	-8	4	-8	-4	multi-exon	FALSE	canonical	3	17	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTACAGTCTTCACCT	NA	False	NA	13	True	AATAAA	-29	NA	10884185	10892845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_10884312_10890095
Isoform_24745_48	chr16	+	3475	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	4	1	4	-1	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGTTTCTCAGTGTT	NA	False	NA	10	True	AATAAA	-13	NA	12927551	12966597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_24747_6	chr16	+	3765	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	14.2270868416553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTCTCAGTGTTTG	NA	False	NA	12	True	AATAAA	-15	NA	12927551	12966599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
Isoform_24748_22	chr16	+	1609	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	2	0	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGTACTTTGGTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	13489883	13496247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13489943_13494697
Isoform_24749_3	chr16	+	1721	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	-21	5	-21	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGTACTTTGGTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	13489771	13496247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13489943_13494697
Isoform_24750_5	chr16	+	1631	4	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	162	13827	0	1813	5prime_fragment	FALSE	canonical	3	82	junction_1	10.3708994574027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	13489883	13507649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619
Isoform_24751_6	chr16	+	1537	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	162	4293	0	30	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCTACCTTGGCTC	NA	False	NA	NA	False	AATAAA	-9	NA	13489883	13517183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
Isoform_24754_3	chr16	+	2845	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	151	7	-11	3	multi-exon	TRUE	canonical	3	82	junction_1	10.7760126660835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAACCTTTATAGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	13489872	13521469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
Isoform_24756_298	chr16	+	3552	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	32	-2	32	2	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598608	13632705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_24757_227	chr16	+	3574	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	10	-2	10	2	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598586	13632705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_24758_14	chr16	+	2711	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-13	884	-8	-884	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGTTTCTCTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	13598563	13631819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_24768_6	chr16	+	2803	26	Fusion	ENSMUSG00000022682.9_ENSMUSG00000022681.16	novel	3582	18	NA	NA	10	-5	multi-exon	TRUE	canonical	3	20	junction_17	251.545005118368	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAATTTGTTTAGATGA	NA	False	NA	NA	False	AATAAA	-15	NA	13598586	13653307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24769_6	chr16	+	3453	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	32	2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598608	13632705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
Isoform_24771_153	chr16	+	1107	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	66	2	-8	1	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637180	13653313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24773_4	chr16	+	1056	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637177	13653313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24774_32	chr16	+	991	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	24	-1	5	1	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637193	13653313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24775_4	chr16	+	1095	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	-80	-1	-25	1	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAGATGACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	13637089	13653313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24777_4	chr16	+	888	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	17	-5	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	230.175975270741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAATTTGTTTAGATGA	NA	False	NA	NA	False	AATAAA	-15	NA	13637224	13653307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_13637301_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
Isoform_24779_4	chr16	+	3056	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	9	22	9	-22	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	500	False	NA	NA	False	NA	NA	NA	13758537	13767220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_24781_13	chr16	+	2258	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	36	793	-1	3	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	527	False	NA	12	True	NA	NA	NA	13758564	13766449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_24786_4	chr16	+	2418	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	37	632	0	23	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGTAATGTGACTTT	528	False	NA	NA	False	NA	NA	NA	13758565	13766610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
Isoform_24787_18	chr16	+	1893	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	0	501	0	-501	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTATATGTTCTTACC	NA	False	NA	8	True	AATAAA	-18	NA	13804467	13918863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
Isoform_24788_9	chr16	+	2146	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	35	213	-18	-213	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGTTGCTTAGTACTC	NA	False	NA	8	True	NA	NA	NA	13804502	13919151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
Isoform_24789_7	chr16	+	1964	3	FSM	ENSMUSG00000022678.17	ENSMUST00000133249.8	681	3	-9	-1274	-3	1274	multi-exon	FALSE	canonical	3	293	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-45	NA	13981158	13989967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13981233_13987315_13987440_13988201
Isoform_24791_9	chr16	+	2389	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-50	-4	-3	4	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTTTTGTGCATT	NA	False	NA	90	True	AATAAA	-12	NA	13981158	14010786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
Isoform_24793_252	chr16	+	2261	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	20	6	-3	4	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTGTTTTGTGCATT	NA	False	NA	90	True	AATAAA	-12	NA	13981158	14010786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
Isoform_24800_5	chr16	+	5923	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	5	864	-2	831	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACCATTTTATTTTTAT	7163	False	NA	18	True	AGTAAA	-24	NA	14179428	14292737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
Isoform_24803_3	chr16	+	5914	42	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	0	45758	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	21.2098660440976	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAATTTCAATATTG	3502	False	NA	NA	False	NA	NA	NA	15455729	15548371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303
Isoform_24804_36	chr16	+	2946	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-35	7	-35	-7	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGCTTTGTCTGTGACC	NA	False	NA	12	True	AATAAA	-12	NA	16031146	16090569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
Isoform_24807_8	chr16	+	3103	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-191	6	-191	-6	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTTTGTCTGTGACCT	NA	False	NA	13	True	AATAAA	-13	NA	16030990	16090570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
Isoform_24809_3	chr16	+	3509	4	FSM	ENSMUSG00000022792.17	ENSMUST00000161191.8	1412	4	5	-2102	1	-7	multi-exon	FALSE	canonical	3	300	junction_2	36.8088153692684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTCATTTCTTTACACA	9520	False	NA	9	True	AATAAA	-14	NA	16120842	16127489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
Isoform_24810_3	chr16	+	1446	4	FSM	ENSMUSG00000022792.17	ENSMUST00000161191.8	1412	4	5	-39	1	39	multi-exon	FALSE	canonical	3	300	junction_2	36.8088153692684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTGCATCATTCAG	9520	False	NA	NA	False	NA	NA	NA	16120842	16125426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
Isoform_24811_127	chr16	+	1575	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-13	12	0	-4	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9506	False	NA	12	True	AATAAA	-17	NA	16120828	16127492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
Isoform_24814_4	chr16	+	1509	5	NIC	ENSMUSG00000022792.17	novel	1528	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	148.16270617129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTCATTTCTTTACACA	9515	False	NA	9	True	AATAAA	-14	NA	16120837	16127489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_16121612_16122399_16122568_16124361_16124464_16125073_16125245_16127195
Isoform_24815_5	chr16	+	1545	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	-16	-1	0	1	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTACACAAGAACAAT	9506	False	NA	17	True	AATAAA	-22	NA	16120828	16127497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
Isoform_24817_8	chr16	+	2937	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAGAGCCTGGGACC	NA	False	NA	NA	False	ATTAAA	-24	NA	16688633	16710846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_24819_13	chr16	+	2936	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	12	2	2	-2	multi-exon	TRUE	canonical	3	71	junction_1	102.489023802552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688632	16710847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_24821_73	chr16	+	2852	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688632	16710847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_24822_3	chr16	+	2921	18	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	100.55486202475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688632	16710847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_16688763_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
Isoform_24823_85	chr16	+	4801	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	119	2	14	-2	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTGCCACTTGGAT	NA	False	NA	33	True	AATAAA	-15	NA	16714451	16745226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
Isoform_24828_10	chr16	+	1382	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	-158	523	27	-188	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATTCAGTTTGTCC	NA	False	NA	NA	False	AAAACA	-13	NA	16801272	16856381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
Isoform_24829_126	chr16	+	2895	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	27	-532	27	532	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGATTCAGTGTTGATT	NA	False	NA	36	True	AATAAA	-26	NA	16801272	16863145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
Isoform_2483_7	chr10	+	2394	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.8990329867172	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGAGCTCTCACTGGTT	NA	False	NA	1	True	AATAAA	-43	NA	4382608	4405133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4398308_4398424_4400646_4400810_4403471
Isoform_24830_11	chr16	+	5064	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	27	-2701	27	-3	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCTCACTGTGTT	NA	False	NA	14	True	AAAAAG	-30	NA	16801272	16865314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
Isoform_24831_708	chr16	+	2903	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	23	2173	23	531	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAGATTCAGTGTTGAT	NA	False	NA	35	True	AATAAA	-25	NA	16801268	16863144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
Isoform_24832_32	chr16	+	5073	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	23	3	23	-3	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCTCACTGTGTT	NA	False	NA	14	True	AAAAAG	-30	NA	16801268	16865314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
Isoform_24839_3	chr16	+	994	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	452	1876	-10	258	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTAGTGAATACTTTC	NA	False	NA	NA	False	NA	NA	NA	16888011	16902724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
Isoform_2484_195	chr10	+	2267	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	161	1	1	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382627	4405140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
Isoform_24840_4	chr16	+	2777	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	490	55	-12	-55	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCAAAAGTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	16888049	16904545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
Isoform_24843_13	chr16	+	1487	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-9	0	-6	0	intron_retention	TRUE	canonical	3	70	junction_3	17.4547032821147	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964833	16966710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
Isoform_24844_28	chr16	+	1295	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	0	2	0	-2	multi-exon	FALSE	canonical	3	70	junction_3	15.4171171105366	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGGTTTATAAAG	NA	False	NA	10	True	AATAAA	-14	NA	16964842	16966708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
Isoform_2485_8	chr10	+	2413	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	15	1	15	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382481	4405140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
Isoform_24851_16	chr16	+	1400	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	231	0	-1	0	multi-exon	FALSE	canonical	3	122	junction_4	58.6725586266908	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094171	17096525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_24852_5	chr16	+	1387	10	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	80.0083328993508	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGGTGTGTGGGGTTTC	NA	False	NA	35	True	AATAAA	-20	NA	17094163	17096522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
Isoform_24853_7	chr16	+	1556	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-6	1	intron_retention	FALSE	canonical	3	132	junction_3	51.3997811279387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGGTGTGTGGGGTTTC	NA	False	NA	35	True	AATAAA	-20	NA	17094166	17096522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_24854_3	chr16	+	1641	8	FSM	ENSMUSG00000055692.22	ENSMUST00000232092.2	1627	8	-14	0	-14	0	multi-exon	TRUE	canonical	3	181	junction_2	39.2189042297154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094158	17096525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_24855_3	chr16	+	1355	8	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	40	junction_7	76.8576739227536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094166	17101090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
Isoform_24856_3	chr16	+	1732	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	181	junction_2	34.7754702819866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTGTGGGGTTTCA	NA	False	NA	36	True	AATAAA	-21	NA	17094174	17096523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
Isoform_24857_3	chr16	+	1265	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-10	5	intron_retention	FALSE	canonical	3	186	junction_5	33.1331488928468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTTTGTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	17094162	17096074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
Isoform_24858_3	chr16	+	1396	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	40	junction_6	82.2464116069645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAAGGGTCTCTTCTTTG	NA	False	NA	5	True	AATAAA	-16	NA	17094201	17101087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
Isoform_24859_3	chr16	+	1828	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094159	17096525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
Isoform_24860_4	chr16	+	1989	5	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-51	1	intron_retention	FALSE	canonical	3	265	junction_3	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGGTGTGTGGGGTTTC	NA	False	NA	35	True	AATAAA	-20	NA	17094121	17096522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17095835
Isoform_24861_6	chr16	+	1036	4	NIC	ENSMUSG00000055692.22	novel	781	7	NA	NA	6	-3	intron_retention	FALSE	canonical	3	40	junction_3	108.001028801684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094964	17101090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17095115_17095205_17095457_17095532_17095756_17100678
Isoform_24863_57	chr16	+	3386	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	55	6	55	-6	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACTTTGCTTGACTAA	1439	False	NA	NA	False	AGTAAA	-9	NA	17223904	17248685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
Isoform_24864_38	chr16	+	1011	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	19	2417	19	-2417	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCTTTGAAATATTAGTT	1403	False	NA	19	True	AATATA	-17	NA	17223868	17246274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
Isoform_24868_45	chr16	+	5061	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	254	junction_1	8	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	3439	False	NA	19	True	AATAAA	-26	NA	17269830	17305297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17270653_17286756_17287223_17301524
Isoform_24877_3	chr16	+	2521	21	NIC	ENSMUSG00000022763.19	novel	2688	21	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.95972971738975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAACTGTGTCCTAGTGT	4196	False	NA	NA	False	ATTAAA	-13	NA	17307474	17325343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17307543_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
Isoform_24878_22	chr16	+	2700	21	FSM	ENSMUSG00000022763.19	ENSMUST00000023448.15	2688	21	-15	3	-15	1	multi-exon	FALSE	canonical	1	3	junction_11	2.45916652547159	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCCTAGTGTAAT	4233	False	NA	NA	False	ATTAAA	-16	NA	17307511	17325346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17307756_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
Isoform_24879_89	chr16	+	3109	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	284	1	-1	1	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTCTCCGAGTCTTC	NA	False	NA	31	True	NA	NA	NA	17326835	17344196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_2488_10	chr10	+	996	5	ISM	ENSMUSG00000019767.13	ENSMUST00000138112.8	3350	11	13	41126	13	6793	5prime_fragment	FALSE	canonical	2	4	junction_1	3.41869858279434	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTTGTTTGTTTG	3220	False	NA	NA	False	ATTAAA	-17	NA	4432514	4471105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_4432629_4462751_4462881_4464055_4464313_4468905_4469051_4470754
Isoform_24881_3	chr16	+	3396	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	-5	3	-5	-1	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGTCTCCGAGTCT	NA	False	NA	29	True	NA	NA	NA	17326546	17344194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_24882_4	chr16	+	3185	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.3575386802169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTCTCCGAGTCTTC	NA	False	NA	31	True	NA	NA	NA	17326818	17344196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337191_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
Isoform_24883_3	chr16	+	3255	20	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	152	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437220	17461363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_24885_3	chr16	+	2368	17	ISM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	3	2676	0	3	5prime_fragment	FALSE	canonical	3	223	junction_5	22.1683896573477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACGGGTTTCTAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	17437223	17460015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561
Isoform_24886_217	chr16	+	3204	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	0	1328	0	152	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437220	17461363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_24891_10	chr16	+	4533	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	0	-1	0	0	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437220	17462692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_24892_14	chr16	+	3111	18	NIC	ENSMUSG00000005899.15	novel	4565	20	NA	NA	0	152	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437226	17461363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_24893_3	chr16	+	4453	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437212	17462691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
Isoform_24894_24	chr16	+	2935	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-25	356	20	-356	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTGTTTAGCAGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	17577501	17596714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
Isoform_24897_481	chr16	+	2570	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577519	17611245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_24898_95	chr16	+	2620	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577469	17611245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_249_153	SIRV2	-	1972	11	FSM	SIRV2A	SIRV202	1971	11	0	-1	0	1	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTCTATAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	5911	1034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
Isoform_2490_195	chr10	+	3345	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	34	7	34	-7	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCTTTCTTATAA	7299	False	NA	16	True	AATAAA	-23	NA	7465614	7501240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
Isoform_24901_175	chr16	+	2573	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-14	-15	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGGCTACAGTCTGAG	NA	False	NA	16	True	AATAAA	-25	NA	17577526	17611243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_24905_48	chr16	+	3211	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	164.993350034344	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577534	17611245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_24911_3	chr16	+	3275	11	FSM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	33	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.53968501984006	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	NA	False	NA	NA	False	AATAAA	-14	NA	17615178	17626157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
Isoform_24912_96	chr16	+	1036	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	-1	15	-1	0	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884305	17889207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
Isoform_24913_307	chr16	+	1027	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	39	20	-1	0	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884305	17889207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
Isoform_24915_6	chr16	+	1324	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	39	-277	-1	8	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGCTGTCCCCAGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	17884305	17889504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
Isoform_24916_5	chr16	+	1897	2	FSM	ENSMUSG00000043811.6	ENSMUST00000059589.6	1938	2	40	1	40	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGGCCTCTTGGGCTG	NA	False	NA	6	True	AATAAA	-15	NA	17945545	17970271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17945767_17968595
Isoform_24917_464	chr16	+	2250	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	117	0	-2	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	386	False	NA	8	True	AATAAA	-22	NA	18066863	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24918_208	chr16	+	2348	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	19	0	19	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	288	False	NA	8	True	AATAAA	-22	NA	18066765	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24928_13	chr16	+	2285	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	-50	0	3	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	398	False	NA	8	True	AATAAA	-22	NA	18066875	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24929_9	chr16	+	2354	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	-119	0	-59	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	329	False	NA	8	True	AATAAA	-22	NA	18066806	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24930_9	chr16	+	2406	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	-171	0	8	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	277	False	NA	8	True	AATAAA	-22	NA	18066754	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24931_8	chr16	+	2569	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	236	0	32	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	301	False	NA	8	True	AATAAA	-22	NA	18066778	18071366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
Isoform_24935_18	chr16	+	3945	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	38	715	38	105	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCCTGTCTTCTGCC	NA	False	NA	8	True	ATTAAA	-11	NA	18166083	18225111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_24937_9	chr16	+	1635	4	FSM	ENSMUSG00000118669.2	ENSMUST00000239537.1	1604	4	-30	-1	-30	1	multi-exon	FALSE	canonical	3	234	junction_1	37.8505834389203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTTTCCTTGTTA	NA	False	NA	NA	False	GATAAA	-21	NA	18210417	18217362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576
Isoform_24939_195	chr16	+	3534	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-13	711	-13	104	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210467	18225110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_24941_6	chr16	+	4289	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-55	-2	-22	2	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGTGACTCATTCTT	NA	False	NA	20	True	NA	NA	NA	18210425	18225823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_24942_59	chr16	+	3576	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-55	711	-22	104	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210425	18225110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_24944_23	chr16	+	4255	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-21	-2	6	2	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGTGACTCATTCTT	NA	False	NA	20	True	NA	NA	NA	18210459	18225823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
Isoform_24946_11	chr16	+	562	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-31	1	-7	1	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCCCTGACTGTCTC	NA	False	NA	11	True	NA	NA	NA	18245180	18256561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
Isoform_24947_38	chr16	+	1403	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	83	-1	12	1	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTCAAGGTGGGAACT	NA	False	NA	16	True	AATAAA	-18	NA	18317545	18383291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24948_8	chr16	+	1457	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	29	-1	29	1	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTCAAGGTGGGAACT	NA	False	NA	16	True	AATAAA	-18	NA	18317491	18383291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24949_3	chr16	+	1394	8	FSM	ENSMUSG00000000884.18	ENSMUST00000000904.15	1412	8	13	5	13	-1	multi-exon	FALSE	canonical	3	36	junction_4	116.273604143022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAGCCTCAAGGTGGG	NA	False	NA	12	True	AATAAA	-14	NA	18317546	18383287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24950_5	chr16	+	1262	7	NIC	ENSMUSG00000000884.18	novel	1485	8	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	117.185631466585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTCAAGGTGGGAACT	NA	False	NA	16	True	AATAAA	-18	NA	18317545	18383291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_18317602_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24951_3	chr16	+	1275	5	NNC	ENSMUSG00000000884.18	novel	637	6	NA	NA	4	-2223	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	127.171881719191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	18317655	18360752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18360224_18360261
Isoform_24952_44	chr16	+	1408	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	4	2137	1	0	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317641	18383292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24954_10	chr16	+	1357	8	NIC	ENSMUSG00000000884.18	novel	3592	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	96.1913484166018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAGCCTCAAGGTGGG	NA	False	NA	12	True	AATAAA	-14	NA	18317683	18383287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24955_4	chr16	+	1238	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317670	18383292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24956_3	chr16	+	871	4	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	140.580542355224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTGAAGCCTCAAGGT	NA	False	NA	9	True	AATAAA	-11	NA	18317641	18383284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_18317702_18317795_18317891_18371116_18371333_18382784
Isoform_24958_3	chr16	+	1452	7	ISM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	227	0	0	0	3prime_fragment	FALSE	canonical	3	265	junction_4	25.8419340521478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317689	18383290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
Isoform_24959_28	chr16	+	1948	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631059	18654005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
Isoform_2496_7	chr10	+	2696	3	FSM	ENSMUSG00000019796.13	ENSMUST00000135907.8	976	3	-276	-1444	34	-17	multi-exon	FALSE	canonical	3	11	junction_1	106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCTTTAAAAAAAATTC	7299	False	NA	6	True	AATAAA	-13	NA	7465614	7501230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7466378_7484307_7484404_7499393
Isoform_24962_78	chr16	+	1958	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	32	6	5	-1	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631075	18654005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
Isoform_24965_16	chr16	+	1276	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	3	2	0	-2	multi-exon	FALSE	canonical	3	86	junction_1	45.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTCTCAATTAGGG	NA	False	NA	15	True	ATTAAA	-15	NA	18655330	18658908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18655370_18655455_18655624_18657839
Isoform_24969_3	chr16	+	1358	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-70	-358	4	-2	multi-exon	FALSE	canonical	3	177	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTCTCAATTAGGG	NA	False	NA	15	True	ATTAAA	-15	NA	18655334	18658908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_18655624_18657839
Isoform_24970_20	chr16	+	2150	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	170	42298	-34	0	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18695985	18746761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
Isoform_24971_5	chr16	+	4147	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	116	-5	-49	5	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTGAATTTAAAATCC	NA	False	NA	12	True	AATAAA	-20	NA	19579099	19591218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
Isoform_24974_9	chr16	+	4374	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	41	3757	-2	-3757	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916332	19944214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_24977_3	chr16	+	4329	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-2	-3761	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAATTTGTATTTTAGT	NA	False	NA	NA	False	TATAAA	-12	NA	19916310	19944210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
Isoform_24979_4	chr16	+	6112	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	1	-1	1	1	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCTGGAAGCACCG	NA	False	NA	17	True	AATAAA	-23	NA	19959817	20051324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
Isoform_2498_339	chr10	+	1279	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	11	-4	0	4	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTTGCTGCTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	7543277	7554649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
Isoform_24990_6672	chr16	+	2467	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	87	0	87	0	multi-exon	FALSE	canonical	3	2657	junction_7	154.998007155648	6672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317653	20328073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
Isoform_24991_133	chr16	+	2572	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	-18	0	-18	0	multi-exon	TRUE	canonical	3	2657	junction_7	154.998007155648	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317548	20328073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
Isoform_24992_1143	chr16	+	2523	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	31	0	31	0	multi-exon	FALSE	canonical	3	2657	junction_7	154.998007155648	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317597	20328073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
Isoform_2501_18	chr10	+	1167	3	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-5	18514	-5	-15640	5prime_fragment	FALSE	canonical	3	105	junction_1	19	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCTCTCTCTCATTT	NA	False	NA	4	True	NA	NA	NA	7556972	7573710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_7557215_7567098_7567579_7573265
Isoform_25015_28	chr16	+	2461	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	60	-2	-22	2	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTGTCTCTACTCATC	NA	False	NA	NA	False	AATAAA	-39	NA	20335791	20350423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
Isoform_25016_9	chr16	+	2571	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	-50	-2	-50	2	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTGTCTCTACTCATC	NA	False	NA	NA	False	AATAAA	-39	NA	20335681	20350423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
Isoform_25018_943	chr16	+	1895	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	36	149	-5	-149	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1389	False	NA	NA	False	AATAAA	-13	NA	20354263	20362657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
Isoform_25019_421	chr16	+	2051	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	26	3	-15	-3	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGTTTTGTTTGGGTC	1379	False	NA	14	True	NA	NA	NA	20354253	20362803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
Isoform_2502_4	chr10	+	2516	4	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-10	13210	-10	-10336	5prime_fragment	FALSE	canonical	3	58	junction_3	34.7658836600865	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGCATTTTCAGTTATT	NA	False	NA	NA	False	AGTAAA	-19	NA	7556967	7579014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373
Isoform_25021_16	chr16	+	1937	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	-6	149	-6	-149	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1347	False	NA	NA	False	AATAAA	-13	NA	20354221	20362657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
Isoform_25027_583	chr16	+	2439	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	88	563	-11	-2	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCTTTTGCCTCTCTGC	NA	False	NA	2	True	ATTAAA	-11	NA	20367414	20379566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_25028_17	chr16	+	2528	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	3	559	3	2	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCTCTGCTCGT	NA	False	NA	6	True	ATTAAA	-15	NA	20367329	20379570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_25030_18	chr16	+	3013	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	76	1	9	-1	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACACGTGCAAGAGCAT	NA	False	NA	9	True	AATAAA	-18	NA	20367402	20380128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
Isoform_25032_128	chr16	+	993	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	1	140	1	2	multi-exon	FALSE	canonical	3	220	junction_2	23	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTAGGATTTT	5900	False	NA	22	True	AATACA	-32	NA	20430343	20437621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20430571_20436375_20436660_20437139
Isoform_25033_11	chr16	+	1130	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	6	-2	-2	2	multi-exon	FALSE	canonical	3	220	junction_2	23	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTATGCTTCTGAT	5905	False	NA	14	True	NA	NA	NA	20430348	20437763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20430571_20436375_20436660_20437139
Isoform_25034_13	chr16	+	3167	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	-13	-2	-13	2	multi-exon	TRUE	canonical	3	19	junction_18	7.37781124490401	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGTCTCTTCCTTCA	NA	False	NA	15	True	AATAAA	-15	NA	20448564	20464667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
Isoform_25039_2876	chr16	+	2927	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	33	1	-19	1	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	2876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTCTGTCTATTTCCTG	NA	False	NA	22	True	AATAAA	-15	NA	20470434	20482163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
Isoform_2505_169	chr10	+	1766	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	8	0	0	0	multi-exon	FALSE	canonical	3	353	junction_4	21.6323831327018	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601771	7638913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
Isoform_25065_77	chr16	+	5475	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	471	junction_14	285.078235903651	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491476	20511630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_25073_154	chr16	+	5465	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCTCTTTACTG	NA	False	NA	15	True	ATTAAA	-15	NA	20491485	20511632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_2509_8	chr10	+	1843	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	-69	0	-69	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601694	7638913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
Isoform_25096_42	chr16	+	5417	32	FSM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	-22	-1	4	1	multi-exon	FALSE	canonical	3	236	junction_1	320.871770382026	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCTCTTTACTG	NA	False	NA	15	True	ATTAAA	-15	NA	20491476	20511632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
Isoform_251_170	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_6	997.649657946115	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
Isoform_2512_43	chr10	+	2880	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	19	572	2	-572	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTACTTTTTTCTT	1141	False	NA	10	True	AGTAAA	-15	NA	7668673	7698327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_2513_4	chr10	+	3442	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	28	1	-2	-1	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGGCATGTGTTCTCTC	1150	False	NA	13	True	NA	NA	NA	7668682	7698898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
Isoform_25134_3	chr16	+	2408	7	FSM	ENSMUSG00000050821.15	ENSMUST00000232207.2	962	7	34	-1480	5	0	multi-exon	FALSE	canonical	0	0	junction_3	0.687184270936277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTTGTCATTGG	NA	False	NA	NA	False	ATTAAA	-27	NA	20512034	20521794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20512223_20513517_20513580_20514488_20514632_20517671_20517766_20518017_20518201_20518378_20518496_20520173
Isoform_25135_468	chr16	+	805	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	143	2	-22	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCTCCATTGTCATT	1047	False	NA	13	True	ATTAAA	-14	NA	20536557	20541015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_25136_10	chr16	+	1207	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	-258	1	-258	-1	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	646	False	NA	14	True	ATTAAA	-15	NA	20536156	20541016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_25138_16	chr16	+	892	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	56	2	56	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCTCCATTGTCATT	960	False	NA	13	True	ATTAAA	-14	NA	20536470	20541015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
Isoform_25142_4	chr16	+	3614	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	-342	3	-342	-1	multi-exon	TRUE	canonical	1	3	junction_1	2.73332661424962	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTTTGAGGTAGGCT	2880	False	NA	NA	False	ATTAAA	-17	NA	20551534	20561131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
Isoform_25143_193	chr16	+	4191	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	-8	2	-8	-2	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGCCCCTGCTCGTT	NA	False	NA	9	True	AATAAA	-12	NA	21023496	21042052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
Isoform_25145_3	chr16	+	3648	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	16	12452	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_35	35.0999784566077	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGGACAAGAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	21241934	21364367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
Isoform_25146_43	chr16	+	4943	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	0	-8	0	0	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241950	21463430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_25147_3	chr16	+	4904	47	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	12	-1	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	25.942753613068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTGCCAGTCTCTTGG	NA	False	NA	15	True	AATAAA	-21	NA	21241930	21463424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_25152_21	chr16	+	585	3	FSM	ENSMUSG00000097290.10	ENSMUST00000181960.3	574	3	-13	2	2	-2	multi-exon	FALSE	canonical	3	94	junction_2	32	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGTTGAAAGGTCCA	NA	False	NA	28	True	AATAAA	-33	NA	21613098	21627788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21613197_21614599_21614726_21627427
Isoform_25157_5	chr16	+	4454	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	18	27	-10	-27	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	2220	False	NA	8	True	AGTAAA	-15	NA	21828251	21867992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25158_31	chr16	+	3112	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-5	1392	-5	-4	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2197	False	NA	18	True	AATAAA	-18	NA	21828228	21866627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25160_118	chr16	+	3088	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	18	1393	-10	-5	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2220	False	NA	17	True	AATAAA	-17	NA	21828251	21866626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25164_4	chr16	+	3211	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-104	1392	-104	-4	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2098	False	NA	18	True	AATAAA	-18	NA	21828129	21866627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25165_3	chr16	+	2904	16	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	119.189746016826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2227	False	NA	17	True	AATAAA	-17	NA	21828258	21866626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25166_11	chr16	+	3152	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	-5	at_least_one_novel_splicesite	TRUE	non_canonical	3	37	junction_3	128.496038203168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2202	False	NA	17	True	AATAAA	-17	NA	21828233	21866626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_21828286_21828306_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_25167_4	chr16	+	3018	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-141	6	0	-6	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATATTCTGATAATTT	2230	False	NA	16	True	AATAAA	-16	NA	21828261	21866625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
Isoform_2517_8	chr10	+	1359	7	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	80	25988	-17	7636	5prime_fragment	FALSE	canonical	3	73	junction_3	9.66810334151545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTGAAAAATAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	11025250	11037906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862
Isoform_25170_39	chr16	+	1866	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	41	20	20	-20	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACTGTTTAGAAGGTA	NA	False	NA	10	True	AATAAA	-14	NA	22676635	22691118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_25171_12	chr16	+	1899	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	11	17	-10	-17	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTAGAAGGTACTT	NA	False	NA	13	True	AATAAA	-17	NA	22676605	22691121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_25173_6	chr16	+	1967	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	29	-69	8	-8	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCAGGTGGCTTTGT	NA	False	NA	99	True	NA	NA	NA	22676623	22691207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
Isoform_25175_30	chr16	+	1247	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1860	4	-492	-4	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTCATGTTCCTT	NA	False	NA	18	True	AATAAA	-43	NA	22713016	22718189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
Isoform_25176_224	chr16	+	1619	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-119	20	-71	1	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCAACCTGTTGACT	NA	False	NA	15	True	AATAAA	-21	NA	22737012	22758508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25177_212	chr16	+	1693	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-196	23	-148	-2	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTTCAACCTGTTG	NA	False	NA	12	True	AATAAA	-18	NA	22736935	22758505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_2518_13	chr10	+	2435	2	ISM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	11	6258	11	-3724	5prime_fragment	FALSE	canonical	3	887	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7603	False	NA	NA	False	NA	NA	NA	11157084	11167538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_11157245_11165263
Isoform_25183_10	chr16	+	1382	7	NIC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-71	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	163.643582893501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCAACCTGTTGA	NA	False	NA	13	True	AATAAA	-19	NA	22737012	22758506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22737341_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25184_42	chr16	+	1697	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-136	11	-136	10	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22736947	22758517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25185_89	chr16	+	1629	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-71	14	-71	7	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCTGTTGACTGAAACT	NA	False	NA	21	True	AATAAA	-27	NA	22737012	22758514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25189_9	chr16	+	1752	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-203	23	-203	-2	multi-exon	TRUE	canonical	0	0	junction_2	190.973018716129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTTCAACCTGTTG	NA	False	NA	12	True	AATAAA	-18	NA	22736880	22758505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25191_20	chr16	+	1589	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-41	-4	-41	-1	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCAACCTGTTGA	NA	False	NA	13	True	AATAAA	-19	NA	22738945	22758506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
Isoform_25194_26	chr16	+	657	2	ISM	ENSMUSG00000022871.14	ENSMUST00000167399.2	1421	8	16048	-10	16048	10	3prime_fragment	FALSE	canonical	3	505	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTGACTGAAACTGGA	NA	False	NA	24	True	AATAAA	-30	NA	22756542	22758517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_22756708_22758025
Isoform_25197_15	chr16	+	2715	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	441	junction_1	579.353916013347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGGTCTGGCCATTTAT	6053	False	NA	NA	False	AATAAA	-20	NA	22926507	22932699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_25200_15	chr16	+	2004	12	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	686.556372698238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
Isoform_25201_35	chr16	+	2008	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	653.897178967119	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_25203_145	chr16	+	1897	11	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_1	507.107927368524	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_25209_27	chr16	+	1757	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_25212_28	chr16	+	3164	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
Isoform_25214_46	chr16	+	2710	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_25217_65	chr16	+	2001	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-19	-17	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
Isoform_25219_74	chr16	+	2005	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	564.272309855287	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_2522_109	chr10	+	3239	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-3	1824	-3	710	multi-exon	FALSE	canonical	3	746	junction_2	70.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGGTTTGACTTTTTGA	7589	False	NA	NA	False	AATAAA	-19	NA	11157070	11171972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_25221_464	chr16	+	1894	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	314	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_25226_17	chr16	+	3024	9	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	189	0	0	intron_retention	FALSE	canonical	3	563	junction_3	488.360122629807	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
Isoform_25227_21	chr16	+	2570	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
Isoform_25229_30	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
Isoform_25231_117	chr16	+	1754	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	189	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
Isoform_25234_12	chr16	+	1942	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	-42	406	7	-406	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTCTTGTGTGAGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	26400460	26520700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
Isoform_25235_26	chr16	+	3332	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398209	29470697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25236_5	chr16	+	3590	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	258	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCATCAATTGTATATG	NA	False	NA	18	True	AATAAA	-19	NA	29398209	29470955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25237_17	chr16	+	3250	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-20	0	-18	0	multi-exon	TRUE	canonical	3	139	junction_4	99.4304230950511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398177	29470694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25239_5	chr16	+	3548	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	258	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCATCAATTGTATATG	NA	False	NA	18	True	AATAAA	-19	NA	29398197	29470955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25240_41	chr16	+	3277	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398209	29470696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25241_4	chr16	+	6001	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-1	-297	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398194	29473405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25244_20	chr16	+	3167	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	58	3005	0	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398209	29470697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25245_20	chr16	+	3187	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	38	3005	-6	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398189	29470697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25246_3	chr16	+	3429	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	54	2747	-4	258	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCATCAATTGTATATG	NA	False	NA	18	True	AATAAA	-19	NA	29398205	29470955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25247_3	chr16	+	5872	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	58	300	0	-300	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTATGATTCTATTAT	NA	False	NA	1	True	ATTAAA	-12	NA	29398209	29473402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
Isoform_25249_309	chr16	+	1464	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	4	0	4	0	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29884161	29886614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
Isoform_25254_5	chr16	+	1097	2	FSM	ENSMUSG00000022528.9	ENSMUST00000161839.2	653	2	31	-475	31	-2	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTTAGAACTGATTAT	NA	False	NA	14	True	AATAAA	-15	NA	29885186	29886612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_29885361_29885689
Isoform_25255_44	chr16	+	3100	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	22	0	18	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247587	31277719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_25256_187	chr16	+	3057	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	65	0	21	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247630	31277719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_25257_9	chr16	+	3288	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	-166	0	-166	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247399	31277719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_25258_191	chr16	+	1654	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	65	1403	21	1	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTGTGCATGAAAG	NA	False	NA	26	True	AGTAAA	-16	NA	31247630	31276316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
Isoform_2527_22	chr10	+	3960	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	11	1089	11	-1089	multi-exon	FALSE	canonical	3	746	junction_2	70.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCTCACCTGTCA	7603	False	NA	8	True	AGTAAA	-11	NA	11157084	11172707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_25273_66	chr16	+	1685	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	96	289	3	-289	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCGGAGTCTCGCTAG	NA	False	NA	NA	False	AATAAA	-20	NA	31767426	31777001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
Isoform_25274_13	chr16	+	1991	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	79	0	-9	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767409	31777290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
Isoform_25278_37	chr16	+	1675	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	35	8	35	6	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTACTGGCTTTTCT	6527	False	NA	18	True	AATAAA	-18	NA	31918652	31926879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
Isoform_2528_28	chr10	+	3926	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	45	1089	45	-1089	multi-exon	FALSE	canonical	3	746	junction_2	70.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCTCACCTGTCA	7637	False	NA	8	True	AGTAAA	-11	NA	11157118	11172707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_25282_9	chr16	+	1361	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	25	8	25	1	multi-exon	FALSE	canonical	3	19	junction_1	52	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066095	32075893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32066344_32070640_32071137_32075276
Isoform_25283_4	chr16	+	1480	3	NIC	ENSMUSG00000022787.11	novel	1394	3	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAACCAACAGTAATTT	NA	False	NA	7	True	AATAAA	-8	NA	32066076	32075890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_32066447_32070640_32071137_32075276
Isoform_25284_26	chr16	+	1136	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	18	-1	-8	1	multi-exon	FALSE	canonical	3	50	junction_1	36.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066062	32075893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32066086_32070640_32071137_32075276
Isoform_25287_5	chr16	+	1813	4	ISM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	11	11176	11	536	5prime_fragment	FALSE	canonical	3	16	junction_3	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	32096289	32108548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936
Isoform_25289_5	chr16	+	3920	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	4	8	4	-8	multi-exon	FALSE	canonical	3	5	junction_5	6.9108610172684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGCAGTGTTTGGCTTT	NA	False	NA	5	True	AATAAA	-6	NA	32096282	32119716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
Isoform_25296_4	chr16	+	4440	6	FSM	ENSMUSG00000014074.18	ENSMUST00000171474.2	4460	6	-4	24	-2	-24	multi-exon	TRUE	canonical	3	5	junction_5	6.9108610172684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	32096274	32120228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
Isoform_25299_3	chr16	+	3316	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	4	6993	4	-1141	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTTGAGTCAAAGTTC	8256	False	NA	NA	False	NA	NA	NA	32151078	32205572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_25300_13	chr16	+	2000	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	3	8310	3	-2458	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATACTTTAATACTGT	8255	False	NA	NA	False	AATAAA	-27	NA	32151077	32204255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_25301_3	chr16	+	1952	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-32	8393	-32	-2541	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATTCTTTTAACAT	8220	False	NA	NA	False	ATTAAA	-24	NA	32151042	32204172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
Isoform_25304_30	chr16	+	764	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	74	0	-19	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238593	32247917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_25306_21	chr16	+	835	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	3	0	3	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238522	32247917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
Isoform_25308_4	chr16	+	859	6	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	122.726688214096	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238586	32247917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_32238746_32241637_32241772_32244058_32244129_32244971_32245060_32245675_32245740_32247573
Isoform_25309_5	chr16	+	698	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	23	-1	23	1	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTCATGAATAGTTTTT	NA	False	NA	6	True	AATAAA	-18	NA	32238586	32247914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
Isoform_2531_16	chr10	+	5082	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-28	6	-28	-6	multi-exon	FALSE	canonical	3	746	junction_2	70.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCTAATTTTTGTTT	7564	False	NA	NA	False	AATAAA	-19	NA	11157045	11173790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11157245_11165263_11167317_11170960
Isoform_25312_12	chr16	+	1737	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-1	3053	-1	-20	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCTCAAAGC	2488	False	NA	NA	False	NA	NA	NA	32249740	32290835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_25313_9	chr16	+	4772	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	6	11	6	-11	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCAATTTCCTG	2495	False	NA	11	True	AATAAA	-16	NA	32249747	32293877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_25314_3	chr16	+	4443	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-18	364	-15	2	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAATAAGTT	2471	False	NA	NA	False	ATTAAA	-15	NA	32249723	32293524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
Isoform_25316_72	chr16	+	4823	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	63	4	0	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8020	False	NA	14	True	AATAAA	-15	NA	32427800	32451608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_25318_16	chr16	+	4845	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	41	4	-22	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7998	False	NA	14	True	AATAAA	-15	NA	32427778	32451608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
Isoform_25320_3	chr16	+	4959	15	NNC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	-196	-1	intron_retention	TRUE	canonical	0	0	junction_10	46.1681155989627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	NA	False	NA	24	True	AATAAA	-20	NA	32462912	32502309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494539_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
Isoform_25322_134	chr16	+	3456	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	32	824	0	-824	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGAGTTGTGGTTTTT	NA	False	NA	14	True	AATAAA	-37	NA	32698182	32728421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
Isoform_25324_41	chr16	+	3484	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	0	828	0	-828	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGATTGAGTTGTGGT	NA	False	NA	10	True	AATAAA	-33	NA	32698150	32728417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
Isoform_25332_8	chr16	+	5509	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	23	4	0	-4	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGGTTTTCTTGCC	NA	False	NA	12	True	AATAAA	-21	NA	32734492	32836013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
Isoform_25335_327	chr16	+	456	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	11	24	-2	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876833	32880535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_25338_776	chr16	+	460	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	39	11	6	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876874	32880535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_25339_35	chr16	+	501	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	-2	11	-2	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876833	32880535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_25341_113	chr16	+	522	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	-22	0	6	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876874	32880535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_25344_16	chr16	+	517	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	9	-8	9	-1	multi-exon	FALSE	canonical	3	8092	junction_3	1051.6733755729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	False	NA	9	True	AATAAA	-24	NA	32877396	32880534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
Isoform_25346_4	chr16	+	3457	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	10	2680	10	-554	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTTTCCTCTGTTCCA	4789	False	NA	NA	False	AATATA	-36	NA	32882900	32945385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
Isoform_25348_79	chr16	+	4505	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	16	0	16	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005456	33063682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
Isoform_25354_314	chr16	+	2456	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-2	707	0	-3	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	9281	False	NA	23	True	AATAAA	-23	NA	33071811	33119932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
Isoform_25355_42	chr16	+	2597	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-2	566	0	138	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTGTTATGGTTTT	9281	False	NA	6	True	ACTAAA	-16	NA	33071811	33120073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
Isoform_25360_5	chr16	+	4189	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-75	5716	-75	4	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGAATGTTTTTTTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	33201130	33319017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_25366_5	chr16	+	4076	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	34	5720	7	0	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACGAATGTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	33201239	33319013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
Isoform_25367_6	chr16	+	2661	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	-8	3	-8	-1	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTTATTTTTTATT	NA	False	NA	6	True	AATAAA	-16	NA	33337689	33483775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25368_18	chr16	+	2607	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	46	3	46	-1	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTTATTTTTTATT	NA	False	NA	6	True	AATAAA	-16	NA	33337743	33483775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25370_4	chr16	+	2450	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	46	-11	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	17.7080882335979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTAATTTTATTGTTTT	NA	False	NA	-4	True	AATAAA	-6	NA	33337743	33483765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25372_5	chr16	+	2501	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	41	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337738	33483778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25374_6	chr16	+	2585	13	FSM	ENSMUSG00000035506.17	ENSMUST00000059056.15	3166	13	-146	727	-95	0	multi-exon	FALSE	canonical	3	33	junction_4	11.0754984838908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33338552	33483778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25375_3	chr16	+	2446	12	NIC	ENSMUSG00000035506.17	novel	3166	13	NA	NA	-77	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	14.1923038159175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTGTTTTATTTTT	NA	False	NA	2	True	AATAAA	-12	NA	33338570	33483771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
Isoform_25376_3	chr16	+	3041	15	FSM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	5	10	5	-2	multi-exon	FALSE	canonical	2	19	junction_14	52.8724398714414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGTAGATCTGATTA	NA	False	NA	12	True	AATAAA	-13	NA	33650051	33769513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768223_33769026
Isoform_25379_37	chr16	+	3098	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-11	195	-11	-2	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGTAGATCTGATTA	NA	False	NA	12	True	AATAAA	-13	NA	33650023	33769513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
Isoform_25384_30	chr16	+	4010	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-17	6	5	2	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGAATTTGTTTACTTA	NA	False	NA	9	True	AATATA	-18	NA	34511084	34545566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_25387_4	chr16	+	4168	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	-62	1	-62	-1	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACGTGAATTTGTTTAC	NA	False	NA	6	True	AATATA	-15	NA	34510923	34545563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_25388_4	chr16	+	4105	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	1	1	1	-1	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACGTGAATTTGTTTAC	NA	False	NA	6	True	AATATA	-15	NA	34510986	34545563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
Isoform_25389_6	chr16	+	3081	3	FSM	ENSMUSG00000035376.11	ENSMUST00000231516.2	389	3	0	-2692	0	2692	multi-exon	FALSE	canonical	3	1246	junction_2	58	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	34842799	34871846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_34843006_34846194_34846313_34869089
Isoform_25391_12	chr16	+	3592	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	2	4	0	-4	multi-exon	FALSE	canonical	3	1242	junction_3	97.2996517065823	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCTGATCTGGAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	34842799	34929543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
Isoform_25393_3	chr16	+	2207	11	ISM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	125440	1342	9655	-1342	3prime_fragment	FALSE	canonical	1	2	junction_8	1.81383571472171	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGACTATGCTAGTTGT	6915	False	NA	NA	False	AATAAA	-25	NA	35100686	35124766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
Isoform_25394_5	chr16	+	4745	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-402	7	24	-7	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAACTGTCTTTGTGCA	NA	False	NA	19	True	ATTAAA	-19	NA	35361538	35484624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
Isoform_25395_13	chr16	+	4622	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-279	7	-70	-7	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAACTGTCTTTGTGCA	NA	False	NA	19	True	ATTAAA	-19	NA	35361661	35484624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
Isoform_25397_35	chr16	+	2645	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	14	-956	14	956	multi-exon	TRUE	canonical	3	531	junction_3	35.6118531058502	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGCTCAGTAGCCAAACT	5418	False	NA	35	True	AATAAA	-29	NA	35590758	35646874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
Isoform_25402_7	chr16	+	2946	7	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	15	-97	intron_retention	FALSE	canonical	3	531	junction_3	37.5133309638054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACGTGTATATTTGC	5419	False	NA	10	True	AATATA	-16	NA	35590759	35645821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35639133_35645058_35645170_35645252
Isoform_25406_8	chr16	+	3533	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	14	1	14	-1	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTGTGAATCGTGAAT	NA	False	NA	12	True	AATAAA	-18	NA	35758853	35792974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_25407_3	chr16	+	3114	11	NIC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.6794691660195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGCTGTGAATCGTGA	NA	False	NA	10	True	AATAAA	-16	NA	35759416	35792972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_35759577_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_25408_5	chr16	+	1558	4	ISM	ENSMUSG00000022906.16	ENSMUST00000023622.13	2973	10	24878	1	15605	-1	3prime_fragment	FALSE	canonical	3	23	junction_2	8.37987005998436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTGTGAATCGTGAAT	8465	False	NA	12	True	AATAAA	-18	NA	35784258	35792974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_35784735_35788019_35788157_35789960_35790136_35792204
Isoform_2541_16	chr10	+	2276	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	57	3408	-26	84	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTATAATATTTTAG	NA	False	NA	13	True	AATACA	-23	NA	13376801	13391371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
Isoform_25410_143	chr16	+	3921	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	4	1114	4	886	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	10	True	AGTAAA	-21	NA	35803688	35856387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
Isoform_25411_74	chr16	+	5033	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	8	-2	-2	2	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTTTTCCTTGGGTT	NA	False	NA	28	True	AATAAA	-41	NA	35803692	35857503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
Isoform_25419_382	chr16	+	669	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	395	9	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892449	35912481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
Isoform_25420_41	chr16	+	1100	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	-36	9	-36	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892018	35912481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
Isoform_25421_9	chr16	+	546	4	FSM	ENSMUSG00000075229.12	ENSMUST00000163352.9	391	4	-6	-149	-6	2	multi-exon	FALSE	canonical	3	31	junction_1	405.618320866085	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTGTGTACATATTTA	NA	False	NA	13	True	ATTAAA	-10	NA	35892443	35912478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_35892508_35905386_35905534_35910270_35910331_35912203
Isoform_25425_33	chr16	+	2478	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	79	485	19	-422	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTACTTCTATTCAT	NA	False	NA	24	True	AATAAA	-20	NA	36514418	36546681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25427_11	chr16	+	2265	7	NIC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-7293	-422	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	129.937698746575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTACTTCTATTCAT	NA	False	NA	24	True	AATAAA	-20	NA	36528606	36546681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543001_36545878
Isoform_25428_77	chr16	+	2283	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7268	-420	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528631	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25429_32	chr16	+	2333	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7321	-423	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTACTTCTATTCA	NA	False	NA	23	True	AATAAA	-19	NA	36528578	36546680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_2543_3	chr10	+	2480	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	55	-528	-28	528	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTACTGGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	13376799	13391815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_25430_14	chr16	+	2679	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7256	-12	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTGGCTAAATT	NA	False	NA	-6	True	ATTAAA	-6	NA	36528643	36547091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25436_12	chr16	+	2408	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7272	-420	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	110.150528318701	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528627	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541797_36542032_36542244_36543042_36545878
Isoform_2544_4	chr10	+	2045	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	46	-84	-37	84	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTATAATATTTTAG	NA	False	NA	13	True	AATACA	-23	NA	13376790	13391371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_25440_58	chr16	+	2225	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14268	420	-7232	-420	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528667	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
Isoform_25443_407	chr16	+	2302	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14292	483	-7268	-420	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528631	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25445_151	chr16	+	2355	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14239	483	-7321	-420	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528578	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25446_83	chr16	+	2707	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14292	78	-7268	-15	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAACTGGCTAA	NA	False	NA	-9	True	ATTAAA	-3	NA	36528631	36547088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25448_23	chr16	+	2771	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14239	67	-7321	-4	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTAAATTCCTGTGTT	NA	False	NA	2	True	ATTAAA	-14	NA	36528578	36547099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_2545_6	chr10	+	1966	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	62	-21	-21	21	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTGCTTCTATTTG	NA	False	NA	-50	True	AATGAA	-45	NA	13376806	13391308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_25457_30	chr16	+	2285	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15367	483	-6193	-420	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36529706	36546683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
Isoform_25459_27	chr16	+	1601	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648764	36679926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
Isoform_2546_8	chr10	+	1873	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	155	-21	72	21	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTGCTTCTATTTG	NA	False	NA	-50	True	AATGAA	-45	NA	13376899	13391308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_25460_26	chr16	+	2213	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCATGTTATTT	NA	False	NA	45	True	AATAAA	-12	NA	36648761	36693076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
Isoform_25461_6	chr16	+	2414	12	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-7	13149	-6	-8	5prime_fragment	FALSE	canonical	3	199	junction_1	25.9274257294988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648762	36679926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816
Isoform_25462_38	chr16	+	1647	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTCAAGTCTG	NA	False	NA	7	True	NA	NA	NA	36648771	36679926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
Isoform_25463_3	chr16	+	2847	14	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-7	1	-6	-1	intron_retention	FALSE	canonical	3	137	junction_13	47.2114718783801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTTGTCATGTTAT	NA	False	NA	43	True	AATAAA	-10	NA	36648762	36693074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812
Isoform_25465_58	chr16	+	2254	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	4	-1	4	1	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCATGTTATTT	NA	False	NA	45	True	AATAAA	-12	NA	36648773	36693076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
Isoform_2547_5	chr10	+	1936	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	155	-84	72	84	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTATAATATTTTAG	NA	False	NA	13	True	AATACA	-23	NA	13376899	13391371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
Isoform_25471_7	chr16	+	743	6	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	1	30	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	11.3384302264467	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGAAATTAATTAG	1478	False	NA	NA	False	AATAAA	-14	NA	36695530	36709793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733
Isoform_25472_59	chr16	+	2006	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	25	0	5	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37360271	37392747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
Isoform_25474_4	chr16	+	1969	8	FSM	ENSMUSG00000022827.15	ENSMUST00000130028.2	1960	8	-8	-1	7	1	multi-exon	FALSE	canonical	3	12	junction_4	38.0767216904748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37360253	37392745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37384030_37384129_37387681_37387754_37390749_37390789_37391391
Isoform_25475_15	chr16	+	3585	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	187	17	5	-17	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAAAATA	5338	False	NA	NA	False	NA	NA	NA	37597421	37656859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
Isoform_25476_12	chr16	+	3594	12	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	-40	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.8333304517214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAAAATA	5293	False	NA	NA	False	NA	NA	NA	37597376	37656859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243_37656281_37656316
Isoform_25479_102	chr16	+	4021	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-19	4602	-19	-4602	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCTAGATGAC	NA	False	NA	NA	False	AATAAA	-17	NA	37688731	37704618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
Isoform_25486_4	chr16	+	2926	12	FSM	ENSMUSG00000022812.15	ENSMUST00000114750.2	1750	12	-802	-374	485	49	multi-exon	FALSE	canonical	1	2	junction_9	16.4818959031412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909847	38061515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38037474_38037514_38040333_38040521_38049039_38049139_38060863
Isoform_2549_59	chr10	+	842	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	304	320	304	-320	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAAGACTATTTCCAG	NA	False	NA	54	True	TTTAAA	-40	NA	13428941	13438800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_25491_35	chr16	+	2902	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	470	4931	470	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909832	38061515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_25493_73	chr16	+	2847	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	525	4931	525	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909887	38061515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_25495_5	chr16	+	3086	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	284	4933	284	47	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	37909646	38061513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_25496_5	chr16	+	3285	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	86	4932	86	48	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAGA	NA	False	NA	NA	False	NA	NA	NA	37909448	38061514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_2550_163	chr10	+	764	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	359	343	359	-343	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCGTGAGCTCTTCCA	NA	False	NA	31	True	TTTAAA	-17	NA	13428996	13438777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_25504_5	chr16	+	3317	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	55	4931	55	49	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37909417	38061515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
Isoform_25506_15	chr16	+	491	4	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	1753.17641883398	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTGTTTCTTTTTCT	NA	False	NA	31	True	ATTAAA	-33	NA	38167363	38173128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_38167570_38169602_38169692_38170038_38170094_38172987
Isoform_25507_675	chr16	+	418	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	8	18	3	0	multi-exon	FALSE	canonical	3	2901	junction_2	455	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATATGCTGAACCGT	NA	False	NA	10	True	ATTAAA	-12	NA	38167360	38173107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38167570_38169602_38169692_38172987
Isoform_25509_144	chr16	+	1836	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	3	-194	3	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7073	False	NA	23	True	AGTAAA	-14	NA	38379062	38411746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_2551_12	chr10	+	1794	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	313	-641	313	641	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTGTTTGAGTCGTT	NA	False	NA	4	True	GATAAA	-14	NA	13428950	13439761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_25510_9	chr16	+	2641	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-24	-972	-24	0	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	7046	False	NA	4	True	AATAAA	-15	NA	38379035	38412524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25511_9	chr16	+	2018	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-180	-193	-180	37	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	6890	False	NA	22	True	AGTAAA	-13	NA	38378879	38411745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25513_9	chr16	+	1672	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-19	-8	-19	8	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTGCGATTTTTAT	7051	False	NA	8	True	GATAAA	-20	NA	38379040	38411560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25516_12	chr16	+	1665	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-30	38	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7040	False	NA	23	True	AGTAAA	-14	NA	38379029	38411746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25518_58	chr16	+	2053	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	40	778	-9	38	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383213	38411746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25519_4	chr16	+	2840	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	29	2	-20	-2	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTCCTATTTGTGAGC	NA	False	NA	2	True	AATAAA	-13	NA	38383202	38412522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_2552_28	chr10	+	1748	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	359	-641	359	641	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTGTTTGAGTCGTT	NA	False	NA	4	True	GATAAA	-14	NA	13428996	13439761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_25521_9	chr16	+	2095	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	2	207	0	-6	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCAGTTCTTGGTCTTG	3914	False	NA	1	True	AGTAAA	-11	NA	38562627	38589204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
Isoform_25525_17	chr16	+	914	6	ISM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	3	24024	3	7061	5prime_fragment	FALSE	canonical	3	68	junction_1	7.7614431647729	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAAGAAAACT	NA	False	NA	NA	False	AAAAAG	-6	NA	43710264	43735906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812
Isoform_25528_128	chr16	+	3611	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	891	8	1	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960200	43982838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_25533_27	chr16	+	3660	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-64	891	-41	1	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960151	43982838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_25540_14	chr16	+	1897	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-87	2677	-64	-485	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATTGAGTGTTTAATA	NA	False	NA	3	True	AATACA	-15	NA	43960128	43981052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_2555_4	chr10	+	1850	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	339	-723	339	723	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACTTTAAATAGTGAGT	NA	False	NA	86	True	AATAAA	-30	NA	13428976	13439843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
Isoform_25551_46	chr16	+	3608	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-48	-3	8	1	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960200	43982838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_25558_15	chr16	+	3638	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	-78	-3	-22	1	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTGTAACTGTC	NA	False	NA	20	True	AATAAA	-20	NA	43960170	43982838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
Isoform_25567_69	chr16	+	3046	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	317	1264	24	90	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGATACTTTTTTTT	6425	False	NA	14	True	AATAAA	-19	NA	44167800	44207596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_25569_3	chr16	+	3269	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	17	88	intron_retention	FALSE	canonical	0	0	junction_1	36.6614046887186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6418	False	NA	12	True	AATAAA	-17	NA	44167793	44207594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_25570_8	chr16	+	2910	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	14	88	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8355505958204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6415	False	NA	12	True	AATAAA	-17	NA	44167790	44207594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
Isoform_25571_24	chr16	+	2730	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-19	155	-19	-155	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTATCTAATCTTCA	NA	False	NA	32	True	ATTAAA	-40	NA	44544644	44557492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
Isoform_25573_105	chr16	+	1474	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-31	614	-31	30	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTTTCATTTCCTG	NA	False	NA	17	True	AATAAA	-12	NA	44979116	45008287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_25576_5	chr16	+	1389	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	116.159201099181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979121	45008257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
Isoform_25577_3	chr16	+	1371	7	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	197.131653695922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGGCTTTTGTT	NA	False	NA	19	True	ACTAAA	-1	NA	48104096	48114596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_48104205_48108240_48108359_48109401_48109464_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_25578_10	chr16	+	1261	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	4	6	4	-6	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTTGTGGCTTTTG	NA	False	NA	17	True	NA	NA	NA	48104153	48114594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
Isoform_25579_62	chr16	+	1459	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	21	-1	21	1	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104118	48114601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_2558_10	chr10	+	694	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	637	-328	637	328	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTATTACGCCTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	14420870	14427103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_14421099_14426637
Isoform_25580_71	chr16	+	1413	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	66	0	14	0	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104163	48114600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_25581_4	chr16	+	2182	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	181.921839138559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTGGCTTTTGTTTTT	NA	False	NA	22	True	ACTAAA	-4	NA	48104127	48114599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
Isoform_25582_7	chr16	+	1482	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGCTTGTGGCTTT	NA	False	NA	15	True	NA	NA	NA	48104171	48114592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
Isoform_25583_18	chr16	+	1784	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	164	0	-164	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48130839	48139922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
Isoform_25592_3	chr16	+	2126	19	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	61	43695	61	25565	5prime_fragment	FALSE	canonical	3	387	junction_7	38.3631124266753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCATGTGGTAAAGGTT	NA	False	NA	NA	False	AATATA	-22	NA	48251660	48407568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255
Isoform_25593_3	chr16	+	2672	19	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	61	43149	61	26111	5prime_fragment	FALSE	canonical	3	387	junction_7	38.3631124266753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	48251660	48408114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255
Isoform_25597_132	chr16	+	2992	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	61	-8	61	8	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251660	48451271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25598_13	chr16	+	3073	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	-22	-6	-22	6	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACATTTCCTTTTGATT	NA	False	NA	17	True	AATAAA	-22	NA	48251577	48451269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_2560_265	chr10	+	1947	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	8	24	-7	7	multi-exon	FALSE	canonical	3	306	junction_1	0	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTTGTTTTCTAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	17598973	17601398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_17599208_17599685
Isoform_25602_20	chr16	+	2890	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	61	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	338.451806909049	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251660	48451271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25603_8	chr16	+	2940	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	78	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.504442609065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	NA	False	NA	19	True	AATAAA	-24	NA	48251677	48451271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25609_16	chr16	+	3500	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	19	455	-16	-401	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTTTTGTTCTTTGCT	NA	False	NA	19	True	ATTAAA	-20	NA	48814569	48839613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
Isoform_25610_4	chr16	+	3951	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	24	-1	-11	1	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTAGATCAGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	48814574	48840069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
Isoform_25612_59	chr16	+	1582	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	4	1015	4	-5	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATCATGTTCAGAGAA	NA	False	NA	12	True	AATAAA	-8	NA	49519599	49584474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
Isoform_25613_3	chr16	+	1442	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-22	1181	-22	-171	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCGTTTTTATATCAAA	NA	False	NA	NA	False	ATTAAA	-25	NA	49519573	49584308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
Isoform_25614_10	chr16	+	1255	9	NIC	ENSMUSG00000055447.20	novel	1313	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTGGAATCCCATTTT	NA	False	NA	18	True	AATAAA	-22	NA	49676009	49731443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
Isoform_25618_2341	chr16	+	559	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	118	0	-28	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	2341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786755	55791798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
Isoform_25619_1038	chr16	+	622	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	55	0	55	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786692	55791798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
Isoform_2562_3	chr10	+	2673	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-70	-8	9	-4	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATACATTGTATTTG	NA	False	NA	10	True	AATAAA	-21	NA	17931617	18000888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
Isoform_25626_3	chr16	+	2105	6	ISM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-75	10848	-75	5938	5prime_fragment	FALSE	canonical	3	98	junction_1	7.33212111192934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGAGGCACCCACTTC	NA	False	NA	NA	False	NA	NA	NA	55794170	55818428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368
Isoform_25627_3	chr16	+	5000	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-88	8	-88	-8	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAAGCTTTGGCGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	55794157	55829268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
Isoform_25628_4	chr16	+	4949	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-32	3	-32	-3	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGGCGTTGAGCTT	NA	False	NA	3	True	AATAAA	-24	NA	55794213	55829273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
Isoform_25629_4	chr16	+	1055	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	-45	120	-5	-1	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGCCTTGCTAGC	NA	False	NA	NA	False	ACTAAA	-16	NA	55895781	55946782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
Isoform_2563_6	chr10	+	1910	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	48	-6	48	6	multi-exon	FALSE	canonical	3	42	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTGTAGTTTTTGT	NA	False	NA	18	True	AATAAA	-20	NA	18720815	18732827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_18721155_18729284_18729426_18731397
Isoform_25630_3	chr16	+	930	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	-16	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCCTTGCTAGCC	NA	False	NA	NA	False	ACTAAA	-17	NA	55895826	55946783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
Isoform_25637_391	chr16	+	2272	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	19	3673	19	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942084	56973395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_25638_114	chr16	+	3770	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	20	2174	20	-1354	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTATCCATTTTTG	NA	False	NA	28	True	AATAAA	-12	NA	56942085	56974894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_25640_62	chr16	+	2303	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-12	3673	-12	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942053	56973395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_25643_26	chr16	+	3802	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-12	2174	-12	-1354	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTATCCATTTTTG	NA	False	NA	28	True	AATAAA	-12	NA	56942053	56974894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_25644_14	chr16	+	2570	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-279	3673	-279	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56941786	56973395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
Isoform_25649_57	chr16	+	3079	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	17	1	17	-1	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTATTTGTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	58490671	58500748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
Isoform_2565_30	chr10	+	2063	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	41	8	32	-8	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAACTCACTTGGATA	NA	False	NA	9	True	AGTAAA	-10	NA	19467737	19485969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
Isoform_25652_5	chr16	+	2083	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	85	-628	-13	-15	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTGTCTAAATTGTT	NA	False	NA	9	True	AATAAA	-16	NA	58548372	58554599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_25653_4	chr16	+	2053	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	-6	-15	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	183.063486255452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTGTCTAAATTGTT	NA	False	NA	9	True	AATAAA	-16	NA	58548395	58554599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_58548448_58549542_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_25654_50	chr16	+	2121	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	15	11	0	-11	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	13	True	AATAAA	-20	NA	58548287	58554603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_25655_238	chr16	+	2013	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	121	13	8	-13	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	11	True	AATAAA	-18	NA	58548393	58554601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
Isoform_25663_70	chr16	+	1980	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	12	167	12	3	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATACATATCTTTGAGC	NA	False	NA	NA	False	AATAAA	-25	NA	59292149	59312657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_25665_10	chr16	+	2885	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	12	-738	12	738	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTCATCTTCCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	59292149	59313562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_25666_17	chr16	+	2211	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	12	-64	12	64	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTATCCACTGTTA	NA	False	NA	20	True	AATAAA	-19	NA	59292149	59312888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
Isoform_25668_156	chr16	+	3279	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	19	5	19	-5	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGAGCAATTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	62674688	62749704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
Isoform_25669_11	chr16	+	3374	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	-76	5	-76	-5	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGAGCAATTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	62674593	62749704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
Isoform_25676_65	chr16	+	4402	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	11	12	11	-12	multi-exon	FALSE	canonical	3	981	junction_2	152	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGAAATCATATTT	NA	False	NA	9	True	AATAAA	-18	NA	64672369	64679858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_64672600_64673161_64673389_64675913
Isoform_25677_75	chr16	+	4283	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	13	129	13	-129	multi-exon	FALSE	canonical	3	981	junction_2	152	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCGTACTCCTGTGC	NA	False	NA	31	True	ATTAAA	-13	NA	64672371	64679741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_64672600_64673161_64673389_64675913
Isoform_25680_6	chr16	+	4355	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-60	130	-60	-130	multi-exon	FALSE	canonical	3	981	junction_2	152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTCGTACTCCTGTG	NA	False	NA	30	True	ATTAAA	-12	NA	64672298	64679740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_64672600_64673161_64673389_64675913
Isoform_25686_37	chr16	+	4282	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	13	-127	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGTACTCCTGTGCTT	NA	False	NA	33	True	ATTAAA	-15	NA	64672371	64679743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_64672600_64673161_64673389_64675916
Isoform_25688_24	chr16	+	4394	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	14	-14	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTTTGAAATCATAT	NA	False	NA	7	True	AATAAA	-16	NA	64672372	64679856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_64672600_64673161_64673389_64675916
Isoform_25691_12	chr16	+	2789	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	3	-5	intron_retention	FALSE	non_canonical	1	3	junction_14	9.28415615743055	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCATTGACTAATGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	70111024	70366597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
Isoform_25692_4	chr16	+	2862	16	NIC	ENSMUSG00000022707.17	novel	2984	16	NA	NA	0	-5	intron_retention	TRUE	canonical	1	5	junction_14	8.94278107376745	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCATTGACTAATGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	70110951	70366597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
Isoform_25695_7	chr16	+	2898	18	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	17	22850	17	2	5prime_fragment	FALSE	canonical	3	54	junction_8	11.7334879931088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTCAGACTACAG	NA	False	NA	NA	False	AATAAA	-30	NA	76810610	76890818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
Isoform_25696_6	chr16	+	4777	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	1	-2	1	2	multi-exon	TRUE	canonical	3	45	junction_20	12.0225056756949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTATTGCTTCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	76810594	76913670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
Isoform_25701_5	chr16	+	3656	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	188	1898	-72	-1898	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAACTTGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	78098571	78135750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
Isoform_25702_3	chr16	+	5528	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	208	6	-52	-6	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCCTTGCGGTGTGGC	NA	False	NA	14	True	AATAAA	-15	NA	78098591	78137642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
Isoform_25704_3	chr16	+	1695	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	-36	-2	-36	2	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAACATTTTAGATT	NA	False	NA	NA	False	AATAAA	-17	NA	78098607	78156664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
Isoform_2571_61	chr10	+	3723	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	527	2	0	-2	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTCTATTTATTTAA	NA	False	NA	12	True	ATTAAA	-17	NA	20024743	20157266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_2572_22	chr10	+	3799	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	518	-65	5	-3	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTTCCTGTGGTTTCA	NA	False	NA	12	True	AATAAA	-21	NA	20024734	20157333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_25722_33	chr16	+	4219	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	-4	-108	4	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTATGAATTATT	NA	False	NA	21	True	AATAAA	-24	NA	84571165	84622820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25725_325	chr16	+	1315	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	2900	-108	-2	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAATGTCTGGTAATA	NA	False	NA	30	True	ACTAAA	-30	NA	84571165	84619916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25729_38	chr16	+	1584	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-258	3044	-258	-2	multi-exon	TRUE	canonical	3	3263	junction_7	414.866630361679	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84570752	84619772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_2573_17	chr10	+	3831	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	418	3	-95	-3	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTCTATTTATTTA	NA	False	NA	11	True	ATTAAA	-16	NA	20024634	20157265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_25734_717	chr16	+	1173	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	3042	-108	0	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571165	84619774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25735_195	chr16	+	1327	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-1	3044	-1	-2	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571009	84619772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25736_142	chr16	+	1445	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	155	2770	-108	128	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCTTATGTGTTCAG	NA	False	NA	32	True	AATATA	-23	NA	84571165	84620046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25737_88	chr16	+	1368	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-42	3044	-42	-2	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84570968	84619772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25740_43	chr16	+	1601	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-1	2770	-1	128	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCTTATGTGTTCAG	NA	False	NA	32	True	AATATA	-23	NA	84571009	84620046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25741_87	chr16	+	1469	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	-1	2902	-1	-4	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGAAATGTCTGGTAA	NA	False	NA	28	True	ACTAAA	-28	NA	84571009	84619914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
Isoform_25767_44	chr16	+	1159	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	2	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACACTTGCAAAGTGAT	NA	False	NA	-8	True	ATTAAA	-19	NA	84571165	84619776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
Isoform_25786_42	chr16	+	4664	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	0	-2462	0	-2	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTTGGTTTTTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	84631812	84660665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_2579_4	chr10	+	3845	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	474	-67	-39	-1	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTCCTGTGGTTTCACT	NA	False	NA	14	True	AATAAA	-23	NA	20024690	20157335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
Isoform_25793_32	chr16	+	4777	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	208	2	208	-2	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTTGGTTTTTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	84632219	84660665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_25794_4	chr16	+	5067	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-79	-1	-79	1	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTTTTGTTTTCT	NA	False	NA	7	True	AATAAA	-16	NA	84631932	84660668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
Isoform_2580_6	chr10	+	1960	7	NNC	ENSMUSG00000019996.18	novel	1008	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	110.886453435736	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGATGTATCTGATTGG	NA	False	NA	NA	False	AATAAA	-18	NA	20024734	20127638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20126340
Isoform_25802_42	chr16	+	789	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	39	1056	-3	1	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGGA	NA	False	NA	NA	False	AAGAAA	-24	NA	87151111	87164574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
Isoform_25803_3	chr16	+	1591	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	39	254	-3	-254	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAATAAATAAAGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	87151111	87165376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
Isoform_25804_9	chr16	+	636	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	5	1059	5	-2	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AAGAAA	-21	NA	87151119	87164571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
Isoform_25806_5	chr16	+	1422	7	FSM	ENSMUSG00000025616.15	ENSMUST00000131206.8	1405	7	-16	-1	0	1	multi-exon	FALSE	canonical	3	153	junction_5	32.3045404445464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCTCTACCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	87251914	87267913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241
Isoform_25807_33	chr16	+	1141	10	ISM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	327	10332	3	2161	5prime_fragment	FALSE	canonical	3	153	junction_5	28.9767893491956	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTCTGATTTTTTGAA	NA	False	NA	NA	False	AATAAA	-8	NA	87251917	87270073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994
Isoform_25810_7	chr16	+	2873	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	327	5	3	-5	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTTATTAGAGTT	NA	False	NA	5	True	AATAAA	-13	NA	87251917	87280400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
Isoform_25811_7	chr16	+	1186	10	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	3	10125	-3	2161	5prime_fragment	FALSE	canonical	3	21	junction_5	65.3080071849473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTCTGATTTTTTGAA	NA	False	NA	NA	False	AATAAA	-8	NA	87251869	87270073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994
Isoform_25813_87	chr16	+	3242	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	-19	2644	-19	-1899	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCGTGTTG	NA	False	NA	NA	False	NA	NA	NA	87495813	87527590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
Isoform_25817_319	chr16	+	645	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	-1	-3	-1	3	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGACTCCTTTGACT	NA	False	NA	22	True	ATTAAA	-21	NA	90017640	90023220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
Isoform_25822_3	chr16	+	1724	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	280	138	26	49	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTACAATGCCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	90628026	90701635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
Isoform_25823_6	chr16	+	1676	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	274	192	20	-2	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATCTGTACATTAAT	NA	False	NA	NA	False	AATAAA	-26	NA	90628020	90701581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
Isoform_25824_28	chr16	+	1137	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-39	1	28	-1	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGGCTCTGTCTCTAA	NA	False	NA	7	True	AATAAA	-19	NA	91169698	91190927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
Isoform_25826_3	chr16	+	2833	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	-2	216	-2	7	multi-exon	FALSE	canonical	1	3	junction_7	21.683807322516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-28	NA	91169668	91202261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
Isoform_25827_13	chr16	+	1795	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	44	11	-41	1	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATTTAGGGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	91203166	91222711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
Isoform_25828_105	chr16	+	3900	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	6	3	-5	1	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	21	True	NA	NA	NA	91282131	91304326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
Isoform_25830_12	chr16	+	3722	10	NIC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	5	1	intron_retention	FALSE	canonical	3	7	junction_2	50.8296598551245	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	21	True	NA	NA	NA	91282130	91304326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_91282305_91286583_91286708_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
Isoform_25831_13	chr16	+	2076	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	10	1622	10	-1168	multi-exon	FALSE	canonical	3	18	junction_6	4.14996653266291	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTGTATCTAAACT	NA	False	NA	NA	False	AATAAA	-12	NA	91343969	91360889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
Isoform_25833_19	chr16	+	5511	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-6	4190	-5	-4190	5prime_fragment	FALSE	canonical	3	478	junction_2	6	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAAGAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91444761	91456731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_91444873_91448517_91448685_91451498
Isoform_25835_4	chr16	+	3764	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-25	2364	-8	1679	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATAGCTGTGTTGTTGA	NA	False	NA	NA	False	AGTAAA	-19	NA	91526232	91626877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
Isoform_25836_3	chr16	+	3508	21	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-59	20208	31	131	5prime_fragment	FALSE	canonical	3	117	junction_18	19.7557586541241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAGCAAATGCCCGT	NA	False	NA	NA	False	AATAAA	-21	NA	91526199	91648335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
Isoform_25837_4	chr16	+	4332	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-45	1077	-27	81	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTTGGTTTTACAAAA	NA	False	NA	22	True	AATAAA	-21	NA	91526213	91667466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
Isoform_25838_4	chr16	+	5413	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-49	0	-31	0	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526209	91668543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
Isoform_25839_4	chr16	+	1328	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-15	-146	-15	10	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTGTGTAGGCCTCCT	NA	False	NA	NA	False	TATAAA	-32	NA	91700935	91709234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
Isoform_25840_86	chr16	+	794	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	52	0	52	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6337	False	NA	5	True	AATAAA	-17	NA	91855209	91909115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_91855369_91896481_91896622_91908620
Isoform_25841_54	chr16	+	506	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	10	1	0	-1	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTCTGCATTCTCTC	NA	False	NA	25	True	AATAAA	-15	NA	92098183	92109928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
Isoform_25842_222	chr16	+	1023	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	27	187	-25	-26	multi-exon	FALSE	canonical	3	426	junction_1	12.5	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAATTCTTTGAATGCA	NA	False	NA	-11	True	AATAAA	-1	NA	93404751	93407206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93405143_93405676_93405785_93406682
Isoform_25845_178	chr16	+	1192	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-24	2	-24	-2	multi-exon	FALSE	canonical	3	122	junction_2	11	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTATTTGGTTTTTGTTT	NA	False	NA	18	True	ATTAAA	-20	NA	93480078	93487876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93480502_93481934_93482043_93487215
Isoform_25846_6	chr16	+	1481	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-314	3	-314	-3	multi-exon	FALSE	canonical	3	122	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTATTTGGTTTTTGTT	NA	False	NA	17	True	ATTAAA	-19	NA	93479788	93487875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93480502_93481934_93482043_93487215
Isoform_25847_4	chr16	+	1546	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-379	3	-379	-3	multi-exon	FALSE	canonical	3	122	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTATTTGGTTTTTGTT	NA	False	NA	17	True	ATTAAA	-19	NA	93479723	93487875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93480502_93481934_93482043_93487215
Isoform_25848_9	chr16	+	1305	8	ISM	ENSMUSG00000022946.11	ENSMUST00000227278.2	1573	10	1269	4	-86	-1	3prime_fragment	TRUE	canonical	3	48	junction_2	9.96319758523583	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACACGTAATTGTCATGT	5818	False	NA	14	True	AATAAA	-17	NA	93596990	93607470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
Isoform_25849_4	chr16	+	4161	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	222.286124414608	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1082	False	NA	13	True	AATAAA	-24	NA	93629116	93672958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
Isoform_25851_111	chr16	+	4053	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1095	False	NA	14	True	AATAAA	-25	NA	93629129	93672959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
Isoform_25852_11	chr16	+	1938	14	FSM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	-10	-34	-10	1	multi-exon	FALSE	canonical	3	16	junction_1	247.655157271309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGCTGACTT	4379	False	NA	17	True	AATAAA	-25	NA	93680801	93702999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93680864_93681320_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
Isoform_25855_790	chr16	+	1906	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	12	4	-11	1	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGCTGACTT	4378	False	NA	17	True	AATAAA	-25	NA	93680800	93702999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
Isoform_25858_13	chr16	+	1512	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	14	5	14	-5	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTTTGACAATCATC	NA	False	NA	2	True	AATAAA	-10	NA	94129292	94137789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
Isoform_25862_4	chr16	+	3670	33	ISM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	119	26548	-2	0	5prime_fragment	FALSE	canonical	3	37	junction_3	18.7157760575804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-18	NA	94171595	94243531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25863_4	chr16	+	2798	24	NIC	ENSMUSG00000040785.20	novel	3614	32	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	14.6878034095677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAGAAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	94171609	94243529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25864_8	chr16	+	2650	23	NIC	ENSMUSG00000040785.20	novel	3614	32	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	18.267355610261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAGAAAAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	94171597	94243532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25865_3	chr16	+	2376	20	NIC	ENSMUSG00000040785.20	novel	2572	22	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	19.4840655117012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAGAAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	94171634	94243529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25866_3	chr16	+	3760	33	FSM	ENSMUSG00000040785.20	ENSMUST00000155692.8	3771	33	12	-1	1	1	multi-exon	FALSE	canonical	3	16	junction_1	20.5650644297556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAGAAAAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	94171616	94243532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25867_3	chr16	+	2732	23	NIC	ENSMUSG00000040785.20	novel	3771	33	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	21.0122455442039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAGAAAAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	94171625	94243532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_94171831_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25868_4	chr16	+	2706	22	NIC	ENSMUSG00000040785.20	novel	2572	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	22.5057311924749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-15	NA	94171601	94243528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_94171831_94204172_94204228_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
Isoform_25869_6	chr16	+	2395	9	ISM	ENSMUSG00000040785.20	ENSMUST00000231915.2	5833	41	70544	-983	-2981	2	3prime_fragment	FALSE	canonical	3	114	junction_3	15.2807067899361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94255274	94270081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
Isoform_25870_3	chr16	+	2209	5	FSM	ENSMUSG00000022895.17	ENSMUST00000233499.2	928	5	-79	-1202	-34	1202	multi-exon	FALSE	canonical	3	115	junction_1	14.8744747806435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	95503287	95514810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129
Isoform_25871_164	chr16	+	3535	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	352	3	-28	3	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTTGTAATGTTGG	NA	False	NA	18	True	AATAAA	-18	NA	95503293	95522092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
Isoform_25873_4	chr16	+	4024	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	-138	4	-138	2	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTCTTTGTAATGTTG	NA	False	NA	17	True	AATAAA	-17	NA	95502803	95522091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
Isoform_25874_147	chr16	+	2497	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-7	5	-7	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	25	True	AATAAA	-19	NA	95946599	95959047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
Isoform_25876_4	chr16	+	2659	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	14	-178	3	178	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTCAGCTTTTTAA	NA	False	NA	NA	False	AGTAAA	-7	NA	95946620	95959230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
Isoform_25879_14	chr16	+	2431	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	-23	7	-17	-7	multi-exon	FALSE	canonical	3	18	junction_2	163.242832069963	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGACTGGGTACTGTG	NA	False	NA	17	True	AATAAA	-11	NA	95946589	95959039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
Isoform_25883_177	chr16	+	3115	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	149.069335098358	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTACAGTCTGAGTT	NA	False	NA	18	True	AATAAA	-27	NA	17577534	17611245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
Isoform_25890_73	chr16	+	995	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	8	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	723	False	NA	19	True	AATAAA	-24	NA	48432057	48451271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25892_8	chr16	+	2565	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-569	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2295	False	NA	16	True	NA	NA	NA	93811730	93815010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
Isoform_25893_7	chr16	+	2616	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-621	1914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2243	False	NA	15	True	NA	NA	NA	93811678	93815009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
Isoform_25894_10	chr16	+	2499	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-502	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2362	False	NA	17	True	NA	NA	NA	93811797	93815011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
Isoform_25895_11	chr16	+	1053	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1915	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2290	False	NA	16	True	NA	NA	NA	93811725	93815010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
Isoform_25898_22	chr16	+	883	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	6	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACATTTCCTTTTGATT	723	False	NA	17	True	AATAAA	-22	NA	48432057	48451269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25899_9	chr16	+	918	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16995	8	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCTTTTGATTGC	690	False	NA	19	True	AATAAA	-24	NA	48432024	48451271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
Isoform_25901_18	chr16	+	4445	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19469	-16	intron_retention	FALSE	canonical	3	13	junction_1	33.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTTAAAAAAAAAATCAAAA	653	False	NA	NA	False	NA	NA	NA	17070996	17079443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_17071098_17072831_17072931_17075198
Isoform_25903_5	chr16	+	1979	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-19	37	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	NA	False	NA	22	True	AGTAAA	-13	NA	38383203	38411745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
Isoform_25904_3	chr16	+	1122	3	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53038	363	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGGATTCCTGTGT	6147	False	NA	NA	False	AATAAA	-14	NA	8951046	8955671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_8951217_8953545_8953645_8954818
Isoform_25909_7	chr16	+	918	5	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22165	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	5.44862367942584	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAACCATTATTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	94544917	94554298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_94545201_94549749_94549952_94553485_94553564_94553805_94553999_94554136
Isoform_25910_4	chr16	+	3382	28	NNC	ENSMUSG00000033653.19	novel	804	10	NA	NA	15805	1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	33.1526378089284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	4843	False	NA	14	True	AATAAA	-20	NA	21304741	21463423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_21305165_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
Isoform_25913_5	chr16	+	2625	16	NNC	ENSMUSG00000057880.13	novel	696	10	NA	NA	-420	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.7273761995985	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTGTTGGTTCCTGAT	NA	False	NA	NA	False	TATAAA	-18	NA	8390345	8437437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_8390476_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
Isoform_25915_3	chr16	+	1161	5	NNC	ENSMUSG00000116930.2	novel	1268	4	NA	NA	124431	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.6393596310755	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCATGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	91979634	91984230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_91979817_91979836_91979896_91981797_91981879_91983347_91983620_91983663
Isoform_25917_3	chr16	+	852	2	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAGATAAGGAATCTG	NA	False	NA	NA	False	NA	NA	NA	18854543	18859453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_18854906_18858963
Isoform_25918_4	chr16	+	1061	2	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCTGTTTCTTGTGG	NA	False	NA	9	True	NA	NA	NA	17829606	17834851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_17829831_17834014
Isoform_25919_3	chr16	+	2969	10	NNC	ENSMUSG00000022545.14	novel	651	2	NA	NA	8434	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.1928981513579	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTTGGTTTCTCAGT	NA	False	NA	7	True	AATAAA	-10	NA	12938091	12966594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr16_+_12938224_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
Isoform_25923_3	chr16	+	952	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-564	-1633	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3164211	3165163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_+_3164200_3165200
Isoform_25925_80	chr16	+	831	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-443	-1633	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3164332	3165163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_+_3164300_3165200
Isoform_25927_3	chr16	-	381	1	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-2	-1676	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAATAAGATGTG	NA	False	NA	NA	False	NA	NA	NA	45563272	45562891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_45562900_45563300
Isoform_25928_3	chr16	-	4274	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	8380695	8376421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_8376400_8380700
Isoform_25929_3470	chr16	-	2080	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	2	11	2	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	3470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAATAA	NA	False	NA	NA	False	GATAAA	-20	NA	45975438	45973358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_45973400_45975400
Isoform_2593_28	chr10	+	3216	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	2232	1	1	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTAACTATCAACTTT	2794	False	NA	13	True	AATAAA	-21	NA	20188218	20216013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_25938_9	chr16	+	237	1	Genic_Genomic	ENSMUSG00000072419.6	novel	NA	NA	NA	NA	-38	-15617	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48124232	48124469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_+_48124200_48124500
Isoform_25939_3	chr16	-	228	1	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTCTTTTATTTAT	NA	False	NA	NA	False	AAAAAG	-39	NA	48128227	48127999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_48128000_48128200
Isoform_2594_12	chr10	+	5450	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-12	-1	0	1	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTGGTCTCTGTTTGCC	2793	False	NA	15	True	AATAAA	-16	NA	20188217	20218246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_25941_15	chr16	-	459	1	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-47942	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4420	False	NA	NA	False	NA	NA	NA	48814305	48813846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_48813800_48814300
Isoform_25942_11	chr16	-	991	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	175	-3318	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAAGT	NA	False	NA	NA	False	AATAGA	-10	NA	8455401	8454410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_8454400_8455400
Isoform_25943_11	chr16	-	1140	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	26	-3318	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAAGT	NA	False	NA	NA	False	AATAGA	-10	NA	8455550	8454410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_8454400_8455600
Isoform_25944_4	chr7	+	179	1	Intergenic	novelGene_1774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26947870	26948049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_26947900_26948000
Isoform_25945_3	chr16	-	1885	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	39	-574	39	574	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAACAAAAAAAAAAAAA	4014	False	NA	NA	False	NA	NA	NA	55794941	55793056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55793100_55794900
Isoform_25946_7	chr16	-	1307	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	42	1	42	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTTTCCTTGTAATGC	4017	False	NA	NA	False	ATTAAA	-23	NA	55794938	55793631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_55793600_55794900
Isoform_25949_9	chr16	-	2359	1	NIC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	2	-9226	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAATAAAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	55850067	55847708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_55847700_55850100
Isoform_25950_4	chr16	-	1507	1	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCATATAATGTTTAT	6785	False	NA	NA	False	AATAAA	-23	NA	55933948	55932441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_55932400_55933900
Isoform_25953_3	chr16	+	2205	1	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	32797	1	1240	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTTGATGGGATATTA	NA	False	NA	12	True	AATAAA	-14	NA	56974862	56977067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_56974900_56977100
Isoform_25955_21	chr7	+	176	1	Intergenic	novelGene_1823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79112538	79112714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_79112500_79112700
Isoform_2596_12	chr10	+	3071	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	2232	1	3	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAACTATCAACTTTTA	2794	False	NA	15	True	AATAAA	-23	NA	20188218	20216015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
Isoform_25960_150	chr16	+	2631	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	-165	-1805	-165	1805	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	61197453	61200084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_61197500_61200100
Isoform_25963_8	chr16	-	183	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64727106	64726923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_64726900_64727100
Isoform_25965_4	chr16	-	186	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGGAAATGC	NA	False	NA	NA	False	NA	NA	NA	73300915	73300729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_73300700_73300900
Isoform_25966_445	chr16	-	506	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-59	-45	-59	45	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTAC	NA	False	NA	-16	True	AATAAA	-16	NA	76200599	76200093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_76200100_76200600
Isoform_25973_19	chr16	-	2554	1	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	1	-26198	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGACAAAAAAAAAAAAAC	3244	False	NA	NA	False	NA	NA	NA	78373544	78370990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_78371000_78373500
Isoform_25974_4	chr16	-	4205	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_82004600_82008800
Isoform_25975_8	chr16	-	192	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84566055	84565863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_84565900_84566100
Isoform_25978_10	chr16	-	357	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8601265	8600908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_8600900_8601300
Isoform_25979_3	chr16	-	178	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	84843034	84842856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_84842900_84843000
Isoform_25980_3	chr16	+	284	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85582389	85582673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_85582400_85582700
Isoform_25983_18	chr16	+	181	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	8605622	8605803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_8605600_8605800
Isoform_25985_3	chr16	-	1089	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	90017504	90016415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_90016400_90017500
Isoform_25986_3	chr16	-	229	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGTCACACTCA	2569	False	NA	NA	False	NA	NA	NA	8621361	8621132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_8621100_8621400
Isoform_25987_3	chr16	+	178	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90109212	90109390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_90109200_90109400
Isoform_25988_3	chr16	+	2063	1	Genic_Genomic	ENSMUSG00000053414.9	novel	NA	NA	NA	NA	-155	-94104	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90182745	90184808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_+_90182700_90184800
Isoform_25989_16	chr16	+	178	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90781692	90781870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_90781700_90781900
Isoform_25991_3	chr16	+	224	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAAGGTGTGTGTGT	NA	False	NA	NA	False	AAAAAG	-23	NA	91442227	91442451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_91442200_91442500
Isoform_25994_44	chr16	-	1998	1	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	4	-11604	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATGAAA	9184	False	NA	NA	False	NA	NA	NA	91525507	91523509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_91523500_91525500
Isoform_25995_10	chr16	-	2111	1	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-31	-11604	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATGAAA	9071	False	NA	NA	False	NA	NA	NA	91525620	91523509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_91523500_91525600
Isoform_25996_6	chr16	+	644	1	NIC	ENSMUSG00000039680.11	novel	846	3	NA	NA	52	-53262	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATCTTT	6337	False	NA	NA	False	NA	NA	NA	91855209	91855853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_91855200_91855900
Isoform_25997_8	chr16	+	217	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AAAAAG	-18	NA	8678702	8678919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_8678700_8678900
Isoform_25998_6	chr16	-	555	1	Genic_Genomic	ENSMUSG00000022948.17	novel	NA	NA	NA	NA	-7	-12190	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93400710	93400155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_-_93400200_93400700
Isoform_25999_5	chr16	-	768	1	NIC	ENSMUSG00000022948.17	novel	539	5	NA	NA	28	-12190	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93400923	93400155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_93400200_93400900
Isoform_260_533	SIRV2	-	683	5	FSM	SIRV2A	SIRV203	686	5	0	3	0	-3	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAATTGACGTGGACGT	NA	False	NA	NA	False	NA	NA	NA	5895	3668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
Isoform_26000_3	chr16	-	2967	1	Genic_Genomic	ENSMUSG00000097768.3	novel	NA	NA	NA	NA	-164	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTAGGCTTGGACT	6407	False	NA	NA	False	AATATA	-16	NA	93591953	93588986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_-_93589000_93592000
Isoform_26002_3	chr16	+	402	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAATTTCTCTGTAAAG	NA	False	NA	NA	False	AATATA	-15	NA	94327838	94328240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_94327800_94328200
Isoform_26003_5	chr16	-	175	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAACAAATGAT	3231	False	NA	NA	False	NA	NA	NA	94356130	94355955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_94356000_94356100
Isoform_26004_5	chr16	-	198	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94427134	94426936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_94426900_94427100
Isoform_26005_3	chr16	-	1147	1	Antisense	novelGene_ENSMUSG00000022895.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACATAG	NA	False	NA	NA	False	NA	NA	NA	95503226	95502079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr16_-_95502100_95503200
Isoform_26006_14	chr16	-	226	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGCTGTAGCTTTGT	7195	False	NA	NA	False	AAGAAA	-28	NA	95761926	95761700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_95761700_95761900
Isoform_26007_3	chr16	-	2363	1	Genic_Genomic	ENSMUSG00000022914.18	novel	NA	NA	NA	NA	7929	549	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGCAAAAAAA	6436	False	NA	NA	False	ATTAAA	-7	NA	95802284	95799921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_-_95799900_95802300
Isoform_26008_56	chr16	+	177	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3835652	3835829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_3835700_3835800
Isoform_26013_7	chr16	+	789	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCGTGTGTATGTACA	10021	False	NA	NA	False	AATAAA	-17	NA	96155440	96156229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_96155400_96156200
Isoform_26014_3	chr16	-	175	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	97058988	97058813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_97058800_97059000
Isoform_26015_3	chr16	-	4263	1	NIC	ENSMUSG00000046962.17	novel	422	2	NA	NA	0	-5403	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAGAAAAAAACAAAACAA	NA	False	NA	NA	False	AATACA	-34	NA	97763815	97759552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_97759600_97763800
Isoform_26019_20	chr16	-	1265	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	453	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACAAAGATTCCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	10602947	10601682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10601700_10602900
Isoform_26020_3	chr16	-	1716	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	1	-1577	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603399	10601683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_10601700_10603400
Isoform_26021_4	chr16	+	187	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10975821	10976008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_10975800_10976000
Isoform_26023_3	chr16	-	186	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11416511	11416325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_11416300_11416500
Isoform_26024_3	chr16	-	2023	1	NIC	ENSMUSG00000065979.13	novel	2663	4	NA	NA	34	-23117	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	11727226	11725203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_11725200_11727200
Isoform_26025_4	chr16	-	190	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATCCATCTTTTT	NA	False	NA	-1	True	AATAAA	-11	NA	13380736	13380546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_13380500_13380700
Isoform_26026_49	chr16	-	169	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	13544031	13543862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_13543900_13544000
Isoform_26027_3	chr16	-	2334	1	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-12	-3247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	13548595	13546261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_13546300_13548600
Isoform_26028_5	chr16	-	194	1	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTCTTATCTCAG	NA	False	NA	-1	True	NA	NA	NA	13581401	13581207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_13581200_13581400
Isoform_2603_11	chr10	+	3206	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-63	-1	2	1	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTAACTATCAAC	2795	False	NA	10	True	AATAAA	-18	NA	20188219	20216010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
Isoform_26030_15	chrX	+	182	1	Intergenic	novelGene_2205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	150958990	150959172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_150959000_150959200
Isoform_26031_4	chr1	+	190	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	108705929	108706119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_108705900_108706100
Isoform_26032_3	chr16	-	172	1	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	13949790	13949618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_13949600_13949800
Isoform_26033_4	chr16	-	3705	1	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	28	-14568	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9844	False	NA	NA	False	NA	NA	NA	13977103	13973398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_13973400_13977100
Isoform_26034_12	chr16	+	284	1	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	13984682	13984966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_13984700_13985000
Isoform_26039_12	chr15	-	177	1	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	29283691	29283514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_29283500_29283700
Isoform_26040_3	chr16	-	179	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	4292280	4292101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_4292100_4292300
Isoform_26042_3	chr16	-	226	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGAGTGTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	15477171	15476945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_15476900_15477200
Isoform_26044_5	chr16	+	1249	1	FSM	ENSMUSG00000071637.6	ENSMUST00000096232.6	3746	1	-68	2565	-68	-1515	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATGTTCATT	NA	False	NA	8	True	AATAAA	-17	NA	15705081	15706330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_15705100_15706300
Isoform_26048_8	chr16	+	1700	1	NIC	ENSMUSG00000022779.17	novel	1076	9	NA	NA	2	-6519	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	16688632	16690332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_16688600_16690300
Isoform_2605_5	chr10	+	3078	12	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTTAAAAACATTTGAC	2793	False	NA	27	True	AATAAA	-35	NA	20188217	20216027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
Isoform_26053_5	chr16	+	176	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	16924489	16924665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_16924500_16924700
Isoform_26055_3	chr2	-	178	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	170005372	170005194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_170005200_170005400
Isoform_26058_5	chr16	+	2645	1	ISM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	27207	7	27115	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTGGAGTCTGTG	8299	False	NA	10	True	ATTAAA	-12	NA	17078642	17081287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_17078600_17081300
Isoform_26059_3	chr16	-	176	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4385636	4385460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_4385500_4385600
Isoform_2606_10	chr10	+	1965	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	31	-5	-18	5	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTATTTAACATTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	20223546	20237055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
Isoform_26060_11	chr16	-	188	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAAT	7343	False	NA	NA	False	NA	NA	NA	17274171	17273983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_17274000_17274200
Isoform_26062_3	chr16	+	916	1	FSM	ENSMUSG00000103149.2	ENSMUST00000193194.2	1166	1	19	231	19	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGAAATCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	17739925	17740841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_17739900_17740800
Isoform_26065_3	chr16	+	243	1	Antisense	novelGene_ENSMUSG00000022718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTCCATTTCTAGTCAA	NA	False	NA	NA	False	AAAAAG	-42	NA	18082787	18083030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr16_+_18082800_18083000
Isoform_26066_3	chr16	-	191	1	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTGTTGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	18263946	18263755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_18263800_18263900
Isoform_26069_3	chr18	-	183	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3384824	3384641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_3384600_3384800
Isoform_2607_4	chr10	+	2304	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	56	-369	7	369	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGCCAATCTCAGTAC	NA	False	NA	35	True	AATAAA	-36	NA	20223571	20237419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
Isoform_26070_9	chr16	-	219	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATATATATATT	NA	False	NA	NA	False	AATAAA	-28	NA	18606502	18606283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_18606300_18606500
Isoform_26071_4	chr16	+	248	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATATATATGCAGCTAG	NA	False	NA	NA	False	NA	NA	NA	18660898	18661146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_18660900_18661100
Isoform_26072_3	chr16	-	180	1	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGATTCCTG	NA	False	NA	NA	False	NA	NA	NA	18667272	18667092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_18667100_18667300
Isoform_26073_20	chr16	+	2112	1	FSM	ENSMUSG00000062901.4	ENSMUST00000231740.2	2109	1	-2	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTTCATTT	NA	False	NA	NA	False	AATAAA	-24	NA	19916321	19918433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_19916300_19918400
Isoform_26076_4	chr16	+	179	1	Genic_Genomic	ENSMUSG00000041215.17	novel	NA	NA	NA	NA	-1987	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20009728	20009907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_+_20009700_20009900
Isoform_26077_8	chr16	-	1070	1	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-3	-3171	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20121114	20120044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_20120000_20121100
Isoform_26080_6	chr18	+	177	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5951488	5951665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_5951500_5951700
Isoform_26086_5	chr16	-	1043	1	FSM	ENSMUSG00000080797.3	ENSMUST00000231978.2	3245	1	2	2200	2	-1494	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAATCAA	4967	False	NA	NA	False	NA	NA	NA	20367204	20366161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_20366200_20367200
Isoform_26087_6	chr16	+	615	1	NIC	ENSMUSG00000115219.3	novel	1134	3	NA	NA	0	-6662	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAACACCTAGTTTTCTT	5899	False	NA	NA	False	AGTAAA	-16	NA	20430342	20430957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_20430300_20431000
Isoform_26090_6	chr16	+	201	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTATATTTTCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20982590	20982791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_20982600_20982800
Isoform_26091_8	chr16	-	1458	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	-2	-1	-2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTTGCACAGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	21152108	21150650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_21150600_21152100
Isoform_26092_9	chr16	+	3117	1	NIC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	12	-8676	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	21241930	21245047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_21241900_21245000
Isoform_26093_3	chr16	+	192	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTAGCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	21604318	21604510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_21604300_21604500
Isoform_26097_3	chr16	+	4306	1	FSM	ENSMUSG00000022855.10	ENSMUST00000231408.2	1605	1	-37	-2664	-14	2664	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTATCAGCAAAAAAAAAAAA	2216	False	NA	NA	False	NA	NA	NA	21828247	21832553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_21828200_21832600
Isoform_26098_3	chr16	+	297	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAAAGAAGGGACAGGG	1920	False	NA	NA	False	NA	NA	NA	21932977	21933274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_21933000_21933300
Isoform_261_205	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_-_3826_3966_4480_4687
Isoform_2610_3	chr10	+	3280	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	41	62101	-37	-52140	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGATTTTATTTTTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	20828486	20894227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
Isoform_26105_3	chr16	-	585	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAACCAAAAAAGAAA	9253	False	NA	NA	False	NA	NA	NA	22252506	22251921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_22251900_22252500
Isoform_26106_3	chr16	+	2428	1	NIC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	0	-12034	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACAGTAATAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	22676594	22679022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_22676600_22679000
Isoform_26107_12	chr16	-	2617	1	FSM	ENSMUSG00000004071.14	ENSMUST00000229452.2	4453	1	3	1833	-2	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	4607796	4605179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_4605200_4607800
Isoform_2611_41	chr10	+	2639	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-24	10	-4	-7	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAGTATGTTTGCATG	NA	False	NA	NA	False	AATAAA	-14	NA	21171912	21187098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
Isoform_26110_4	chr16	-	188	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	23439216	23439028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_23439000_23439200
Isoform_26111_125	chr19	+	401	1	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAGAACAAGCAG	NA	False	NA	NA	False	NA	NA	NA	41513702	41514103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_41513700_41514100
Isoform_26112_369	chr16	+	1211	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-76	-166	-76	166	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	24348067	24349278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_24348100_24349300
Isoform_26119_5	chr16	+	185	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	24650622	24650807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_24650600_24650800
Isoform_26121_8	chr9	-	174	1	Intergenic	novelGene_2034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56649935	56649761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_56649800_56649900
Isoform_26122_12	chr16	-	2138	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	237	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	29765335	29763197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_29763200_29765300
Isoform_26123_3	chr16	-	2332	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	41	2	41	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29765531	29763199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_29763200_29765500
Isoform_26127_4	chr16	+	3057	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	-58	76	-58	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGCCTTGTTTCAGT	NA	False	NA	16	True	TATAAA	-17	NA	30418482	30421539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_30418500_30421500
Isoform_26128_323	chr16	+	3003	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	3	69	3	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCAGTTCTGTTG	NA	False	NA	23	True	TATAAA	-24	NA	30418543	30421546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_30418500_30421500
Isoform_26130_19	chr16	+	3065	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	3	7	3	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCGAGAGCCTCTGG	NA	False	NA	85	True	AATAAA	-16	NA	30418543	30421608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_30418500_30421600
Isoform_26135_3	chr16	-	180	1	ISM	ENSMUSG00000116951.2	ENSMUST00000231571.2	805	3	1501	0	868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTT	5912	False	NA	NA	False	NA	NA	NA	30688041	30687861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_-_30687900_30688000
Isoform_26136_8	chr16	+	2103	1	NIC	ENSMUSG00000046598.16	novel	3122	7	NA	NA	14	-7285	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31247623	31249726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_31247600_31249700
Isoform_26138_8	chr16	-	1456	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	31767323	31765867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31765900_31767300
Isoform_26139_311	chr16	-	735	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	-11	721	-11	-721	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTCTGAATGTGGTA	NA	False	NA	-9	True	ATTAAA	-13	NA	31767323	31766588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_31766600_31767300
Isoform_26143_7	chr16	+	232	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCACCCAGCATGATGG	NA	False	NA	NA	False	NA	NA	NA	31828262	31828494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_31828300_31828500
Isoform_26144_3	chr16	-	210	1	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTTGTCCGTGTA	NA	False	NA	NA	False	AAGAAA	-9	NA	31881057	31880847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_31880800_31881100
Isoform_26145_3	chr16	-	780	1	NIC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	15	-45463	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCACAAGAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	31898145	31897365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_31897400_31898100
Isoform_26147_3	chr16	+	198	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTTAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	32140293	32140491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_32140300_32140500
Isoform_26148_3	chr16	+	1260	1	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	23	-8067	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAACAACCCAA	NA	False	NA	NA	False	NA	NA	NA	32238586	32239846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_32238600_32239800
Isoform_26155_12	chr2	+	177	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62877604	62877781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_62877600_62877800
Isoform_26156_3	chr16	-	1345	1	Genic_Genomic	ENSMUSG00000097318.3	novel	NA	NA	NA	NA	-16	455	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAAAG	-7	NA	33201113	33199768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_-_33199800_33201100
Isoform_26158_10	chr16	-	338	1	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAATTGAGATAGTC	NA	False	NA	NA	False	AAAAAG	-9	NA	33618348	33618010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_33618000_33618300
Isoform_26159_8	chr16	+	175	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33632936	33633111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_33632900_33633100
Isoform_26162_7	chr16	-	700	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	-36	-49	-36	49	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	33827863	33827163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_33827200_33827900
Isoform_26163_12	chr16	+	217	1	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	673	False	NA	NA	False	NA	NA	NA	34650625	34650842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_34650600_34650800
Isoform_26168_8	chr16	-	203	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGTAAACATGTGGA	NA	False	NA	NA	False	NA	NA	NA	35811433	35811230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_35811200_35811400
Isoform_2617_829	chr10	+	2758	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-19	-6	-4	6	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171912	21244788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
Isoform_26170_5	chr16	-	3833	1	NIC	ENSMUSG00000003955.9	novel	318	3	NA	NA	36	-21308	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAAAAAAAGCTGTAGC	NA	False	NA	NA	False	NA	NA	NA	35891928	35888095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_35888100_35891900
Isoform_26171_8	chr16	+	695	1	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	0	-12568	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAACAAAAAAACA	NA	False	NA	NA	False	ATTAAA	-16	NA	35892449	35893144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_+_35892400_35893100
Isoform_26173_6	chr16	-	2189	1	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-3	-4769	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAATAAACAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	5073808	5071619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_5071600_5073800
Isoform_26174_9	chr16	+	2414	1	FSM	ENSMUSG00000034243.18	ENSMUST00000023534.7	498	1	9	-1925	9	1925	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAATAAATAAATAAAA	1459	False	NA	NA	False	NA	NA	NA	36695511	36697925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_36695500_36697900
Isoform_26176_5	chr16	+	2700	1	ISM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	17766	4	17766	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTCTTCTTGGTCCGG	NA	False	NA	18	True	AATAAA	-18	NA	37706516	37709216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_37706500_37709200
Isoform_26179_4	chr16	-	223	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACTAGTGTGTATCTC	NA	False	NA	NA	False	NA	NA	NA	38163572	38163349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_38163300_38163600
Isoform_26181_4	chr16	-	681	1	NIC	ENSMUSG00000002846.10	novel	1573	7	NA	NA	13	-5288	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	38342990	38342309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr16_-_38342300_38343000
Isoform_26182_912	chr16	+	504	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	-71	-114	-71	114	mono-exon	FALSE	NA	NA	NA	NA	NA	912	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAATGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	42775922	42776426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_42775900_42776400
Isoform_26189_6	chr17	-	1218	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	-19	11	-19	-11	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165089	3162075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
Isoform_26190_6	chr17	-	3058	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	3	-1659	3	1659	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTTGTAATCTGGAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	3608053	3567871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
Isoform_26191_82	chr17	-	1394	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	26	-18	-1	18	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCCCAAAGGACT	NA	False	NA	NA	False	AATAAA	-34	NA	3608030	3569512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
Isoform_26193_318	chr17	-	944	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	5	-1	5	1	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3473	False	NA	-7	True	NA	NA	NA	5490513	5461143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
Isoform_26194_4	chr17	-	855	3	NIC	ENSMUSG00000004945.16	novel	948	4	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	316.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	3461	False	NA	-7	True	NA	NA	NA	5490525	5461143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_5461743_5483716_5483855_5490407
Isoform_26195_4	chr17	-	589	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	18	173	5	-173	multi-exon	FALSE	canonical	3	677	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTATATTGCTTG	3473	False	NA	NA	False	AATAAA	-15	NA	5490513	5483472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_5483855_5489806_5489908_5490407
Isoform_26197_34	chr17	-	2106	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	31	1870	17	0	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCCATCTGTTGTTA	2624	False	NA	-19	True	AATATA	-15	NA	6129985	6094340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_26198_6	chr17	-	2052	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	-13	-6	1	6	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2594	False	NA	-13	True	AATATA	-21	NA	6130015	6094334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_26199_9	chr17	-	2005	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	10	6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2617	False	NA	-13	True	AATATA	-21	NA	6129992	6094334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
Isoform_2620_17	chr10	+	2806	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTTATTTCTTA	NA	False	NA	23	True	AATAAA	-25	NA	21171914	21244793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
Isoform_26202_140	chr17	-	697	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	66	2558	-16	-2558	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6367709	6360826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
Isoform_26206_3	chr17	-	3954	11	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-2271	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	340.009411634443	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGACTTTTTGTTGCT	NA	False	NA	-1	True	AATAAA	-20	NA	6719415	6705925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286
Isoform_26209_14	chr17	-	1095	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15006	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTTTCTTTTCCCCA	2348	False	NA	NA	False	AATAAA	-16	NA	6744541	6723806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
Isoform_26213_8	chr17	-	669	6	NNC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	3546.68603628796	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCATGTAGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	6923240	6914004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6914260_6914426_6914529_6917085_6917164_6917501_6917626_6920709_6920752_6923172
Isoform_26216_663	chr17	-	697	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	66	8	-16	-8	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6923233	6916344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
Isoform_2623_33	chr10	+	2754	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	35	4	-4	-4	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTTATTTCTTA	NA	False	NA	23	True	AATAAA	-25	NA	21171912	21244793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
Isoform_26233_998	chr17	-	2901	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	29	234	29	-234	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050154	7005673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_26235_157	chr17	-	2926	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	4	234	4	-234	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050179	7005673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_26236_252	chr17	-	2591	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	4	569	4	-569	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCATGTAACCGAGACA	NA	False	NA	-10	True	AATAAA	-15	NA	7050179	7006008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_26237_1561	chr17	-	2566	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	29	569	29	-569	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCATGTAACCGAGACA	NA	False	NA	-10	True	AATAAA	-15	NA	7050154	7006008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
Isoform_26255_5	chr17	-	1628	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	-60	46	-60	-46	multi-exon	FALSE	canonical	2	7	junction_1	24.1119836409624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	7215815	7172160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
Isoform_26256_6	chr17	-	1567	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	1	46	1	-46	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	7215754	7172160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
Isoform_26258_5	chr17	-	2598	3	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-45	-4	-45	4	intron_retention	FALSE	canonical	3	411	junction_2	60	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTTCCATTCAGCCA	NA	False	NA	-15	True	AATAAA	-23	NA	7228600	7222405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_7224424_7225052_7225168_7228135
Isoform_26261_14	chr17	-	2247	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	11	54	11	-54	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGCCGATGTTATATC	NA	False	NA	-73	True	AATAAA	-26	NA	7228544	7222463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_26262_4	chr17	-	2317	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	1	-6	1	6	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTCCATTCAGCCAGT	NA	False	NA	-13	True	AATAAA	-25	NA	7228554	7222403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
Isoform_26263_6	chr17	-	1013	10	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-2	-514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	333.963441482617	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	0	True	AAAAAG	-15	NA	8366619	8347421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_8347719_8349056_8349132_8349468_8349513_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_26265_346	chr17	-	960	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	310	523	-2	-523	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8366619	8347430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_26266_93	chr17	-	989	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	283	521	-29	-521	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	-7	True	AAAAAG	-8	NA	8366646	8347428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
Isoform_26267_6	chr17	-	903	8	NIC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-3	-523	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	257.416124639638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8366620	8347430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8361349_8361403_8364373_8364435_8366425
Isoform_26269_7	chr17	-	2084	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	457	6006	438	486	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAACAA	NA	False	NA	NA	False	AATATA	-44	NA	10537852	10427535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
Isoform_2627_3	chr10	+	1081	3	FSM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	-17	-2	-17	2	multi-exon	TRUE	canonical	3	7	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACTCTGTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	21469026	21498277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21469134_21469230_21469472_21497544
Isoform_26270_3	chr17	-	2150	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	391	6006	372	486	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAACAA	NA	False	NA	NA	False	AATATA	-44	NA	10537918	10427535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
Isoform_26271_5	chr17	-	5417	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	23	1	13	-1	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCGTCTGTTACTGGC	NA	False	NA	0	True	AATAAA	-22	NA	12537660	12446508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
Isoform_26272_28	chr17	-	472	2	FSM	ENSMUSG00000014426.10	ENSMUST00000233683.2	3813	2	15	3326	5	-3326	multi-exon	FALSE	canonical	3	187	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGAGCCTGTCACTTGC	NA	False	NA	-3	True	NA	NA	NA	12537668	12496810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_12496999_12537384
Isoform_26274_3	chr17	-	4455	18	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	69196	6	811	-6	3prime_fragment	TRUE	canonical	3	160	junction_16	30.1679267804132	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGTGTAAGTGACTCAC	NA	False	NA	-6	True	AATAAA	-13	NA	12919355	12901298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228
Isoform_26275_3	chr17	-	3999	27	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	-38	20990	-38	-4869	5prime_fragment	FALSE	canonical	3	127	junction_11	17.2209793617412	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGGACCACAGGGAT	5580	False	NA	NA	False	NA	NA	NA	12988589	12922282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
Isoform_26276_3	chr17	-	1771	19	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.3170793704637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2985	False	NA	-8	True	GATAAA	-20	NA	13128822	13107615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_13107857_13108962_13109062_13109165_13109316_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_26277_49	chr17	-	1795	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	297	0	13	0	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2987	False	NA	-8	True	GATAAA	-20	NA	13128820	13107615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
Isoform_26279_4	chr17	-	1039	3	ISM	ENSMUSG00000073460.6	ENSMUST00000232982.2	620	8	-40	8117	13	-8117	5prime_fragment	FALSE	canonical	3	130	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	2987	False	NA	NA	False	NA	NA	NA	13128820	13127130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_13128014_13128348_13128407_13128722
Isoform_2628_379	chr10	+	2599	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	2	1	2	-1	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGTGTCATGTGTT	NA	False	NA	12	True	AATAAA	-18	NA	21854572	21875796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_26281_332	chr17	-	972	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	250	-3	8	3	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTACTGTGTTGTGCTC	NA	False	NA	-6	True	ATTAAA	-21	NA	13134982	13130232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
Isoform_26287_548	chr17	-	2176	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	27	-403	27	-2	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179231	13161926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
Isoform_26292_227	chr17	-	2107	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	-7	150	-7	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179641	13161926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
Isoform_26293_2458	chr17	-	2065	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	35	150	8	-2	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	2458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCTTGTCAGTGAG	NA	False	NA	-2	True	NA	NA	NA	13179599	13161926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
Isoform_26300_9	chr17	-	3638	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211148	13185686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26301_10	chr17	-	3588	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211097	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26303_12	chr17	-	2561	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	13	junction_2	233.876559103214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211097	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_13186939_13188291_13188447_13193623_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26305_40	chr17	-	2034	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	17	0	17	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211129	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26306_61	chr17	-	2002	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	49	0	-18	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211097	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26307_11	chr17	-	2201	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	-144	3	-95	0	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211528	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_26308_44	chr17	-	2103	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	-46	3	3	0	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211430	13185685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_26309_5	chr17	-	1971	8	NIC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	239.599069876563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTTTGTTTTTTCC	NA	False	NA	-7	True	AATAAA	-13	NA	13213054	13185687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
Isoform_2631_80	chr10	+	2475	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	1	0	-1	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGTGTCATGTGTT	NA	False	NA	12	True	AATAAA	-18	NA	21868121	21875796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_26310_41	chr17	-	1654	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-52	1585	15	-718	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGGTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	13211131	13193156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26311_57	chr17	-	1620	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-18	1585	-18	-718	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGGTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	13211097	13193156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26312_5	chr17	-	3199	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-17	5	-17	-5	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGATTGTGATTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	13211096	13191576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
Isoform_26313_18	chr17	-	1720	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	3	719	3	-719	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGGGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	13211430	13193157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_26314_11	chr17	-	1791	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	-66	717	-66	-717	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGGGTTTTTTTTAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	13211499	13193155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
Isoform_26317_106	chr17	-	2705	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	367	178	367	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14423989	14415491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
Isoform_26318_8	chr17	-	2780	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	292	178	292	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14424064	14415491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
Isoform_26319_137	chr17	-	1665	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-6	4	-6	1	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACGATGACCTTAAAC	NA	False	NA	-23	True	AATAAA	-12	NA	15181541	15165274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_26321_25	chr17	-	1669	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACGATGACCTTAAAC	NA	False	NA	-23	True	AATAAA	-12	NA	15181551	15165274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
Isoform_26324_14	chr17	-	4043	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-32	2729	-32	0	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181567	15167999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
Isoform_26325_11	chr17	-	1161	5	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.4805904575746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTTTTCTTTCTTTC	NA	False	NA	-5	True	GATAAA	-15	NA	15461015	15451843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_15452674_15453032_15453145_15454190_15454265_15460531_15460624_15460962
Isoform_26326_6	chr17	-	1181	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	0	-2	0	-2	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCTTTTCTTTCTTT	NA	False	NA	-6	True	GATAAA	-14	NA	15461045	15451844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
Isoform_26327_4	chr17	-	1033	4	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	46	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	23.2999761564017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTTTTCTTTCTTTC	NA	False	NA	-5	True	GATAAA	-15	NA	15460999	15451843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_15452674_15454190_15454265_15460531_15460624_15460962
Isoform_26328_4	chr17	-	3580	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	0	1	0	-1	multi-exon	FALSE	canonical	2	3	junction_7	1.34536240470737	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTGTGACTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	15596238	15587616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
Isoform_26332_1925	chr17	-	812	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	3	943	3	-5	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTCATTTTCTTACAC	NA	False	NA	-18	True	ATTAAA	-10	NA	15718557	15696225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
Isoform_26333_259	chr17	-	1073	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	3	682	3	14	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATATATTTATTTATT	NA	False	NA	-5	True	AATATA	-16	NA	15718557	15695964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
Isoform_26336_6	chr17	-	1188	6	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	344.156592265788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACTAAAAACTTAT	NA	False	NA	-33	True	NA	NA	NA	15747555	15741855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747157
Isoform_26337_500	chr17	-	1090	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	11	19	-9	-1	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACTAAAAACTTAT	NA	False	NA	-33	True	NA	NA	NA	15747552	15741855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
Isoform_26339_6	chr17	-	936	6	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	342.204967818996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGCCTCAGTACCTCA	NA	False	NA	-19	True	NA	NA	NA	15747552	15741841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746802_15746875_15747252
Isoform_26342_55	chr17	-	2064	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	1	3633	1	-2332	multi-exon	FALSE	canonical	3	46	junction_1	3.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTTAGTATGTACAGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	16046847	16027082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_16028064_16040931_16041441_16046273
Isoform_26343_7	chr17	-	4190	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	28	1480	2	-179	multi-exon	FALSE	canonical	3	46	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGATGTTTGTTCTCTG	NA	False	NA	-6	True	AATAAA	-16	NA	16046820	16024929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_16028064_16040931_16041441_16046273
Isoform_26345_5	chr17	-	676	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	0	3010	0	-2027	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAAAGAATACTAT	NA	False	NA	NA	False	TTTAAA	-39	NA	22064740	22038875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
Isoform_26346_3	chr17	-	3270	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-18	13	-5	-13	multi-exon	TRUE	canonical	3	43	junction_3	17.9041894538681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATTGAACAAGTTGGAC	NA	False	NA	NA	False	NA	NA	NA	22181450	22145953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
Isoform_26347_10	chr17	-	2514	3	FSM	ENSMUSG00000071267.12	ENSMUST00000126485.2	2481	3	-32	-1	-32	1	multi-exon	FALSE	canonical	3	50	junction_2	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22181477	22158724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_22160832_22172868_22173035_22181236
Isoform_26348_4	chr17	-	2634	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	239	-1	239	1	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCTGTTTCCATTT	NA	False	NA	NA	False	NA	NA	NA	22384932	22363338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
Isoform_26349_9	chr17	-	915	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	2	1867	2	-1867	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580379	22558836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
Isoform_26350_7	chr17	-	2778	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	109	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTCTTTAGCTG	6793	False	NA	NA	False	AATAAA	-18	NA	23783103	23775742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
Isoform_26351_4	chr17	-	2875	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	6698	False	NA	NA	False	AATAAA	-20	NA	23783198	23775740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
Isoform_26352_159	chr17	-	2672	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	13	1	13	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTCTTTAGCTGG	6697	False	NA	NA	False	AATAAA	-19	NA	23783199	23775741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
Isoform_26354_3	chr17	-	2677	5	NIC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	93	-1	intron_retention	FALSE	canonical	3	33	junction_3	7.11951543294907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTCTTTAGCTGG	6777	False	NA	NA	False	AATAAA	-19	NA	23783119	23775741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_23777287_23778356_23778679_23778958_23779077_23780119_23780635_23782942
Isoform_26355_7	chr17	-	2225	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	37.0929762743419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4821	False	NA	0	True	ATTAAA	-21	NA	23805208	23794817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23803793_23803913_23804411_23804549_23804934
Isoform_26356_6	chr17	-	1896	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	380	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	32.2837420383697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	NA	False	NA	-2	True	ATTAAA	-19	NA	23818081	23794819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23818015
Isoform_26357_83	chr17	-	2102	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	0	2	0	-2	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4823	False	NA	-2	True	ATTAAA	-19	NA	23805206	23794819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_26360_3	chr17	-	2522	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-32	-386	-32	386	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTGTGGTTGTTGTTG	4791	False	NA	NA	False	NA	NA	NA	23805238	23794431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_26362_17	chr17	-	2109	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.6579102609	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4797	False	NA	0	True	ATTAAA	-21	NA	23805232	23794817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
Isoform_26363_3	chr17	-	606	3	FSM	ENSMUSG00000062012.15	ENSMUST00000228298.2	502	3	-60	-44	-4	44	multi-exon	FALSE	canonical	3	12	junction_1	39	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCTTTTATGGTGTA	4819	False	NA	NA	False	AATAAA	-18	NA	23805210	23803719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23803913_23804411_23804549_23804934
Isoform_26364_35	chr17	-	1510	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-7	1	-7	0	multi-exon	FALSE	canonical	3	423	junction_10	38.5186643070603	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	787	False	NA	-22	True	AATAAA	-13	NA	23892823	23887592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
Isoform_26366_57	chr17	-	1439	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	11	0	0	0	multi-exon	TRUE	canonical	3	160	junction_13	93.5049281997111	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	765	False	NA	-21	True	AATAAA	-14	NA	23892845	23887591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
Isoform_26367_34	chr17	-	1427	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	4	0	4	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	769	False	NA	-22	True	AATAAA	-13	NA	23892841	23887592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
Isoform_26369_62	chr17	-	990	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGCCTGATCCCTAA	NA	False	NA	-2	True	AATAAA	-17	NA	23896449	23894419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
Isoform_26370_64	chr17	-	2047	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	-4	532	-4	-532	multi-exon	FALSE	canonical	3	32	junction_1	3.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGTGTTCCCAAGAC	NA	False	NA	NA	False	AATAAA	-33	NA	23959376	23955691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23956974_23957113_23957336_23958833
Isoform_26371_41	chr17	-	2503	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	72	0	72	0	multi-exon	FALSE	canonical	3	32	junction_1	3.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCCTGACCACATTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	23959300	23955159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23956974_23957113_23957336_23958833
Isoform_26373_5	chr17	-	2281	9	ISM	ENSMUSG00000040680.10	ENSMUST00000046525.10	2123	10	472	5	472	-5	3prime_fragment	FALSE	canonical	1	2	junction_8	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGGCTTTAGCAAGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	23964335	23960175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_23960946_23961170_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
Isoform_26374_5	chr17	-	2021	9	ISM	ENSMUSG00000040680.10	ENSMUST00000046525.10	2123	10	733	4	733	-4	3prime_fragment	TRUE	canonical	1	2	junction_8	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGCTTTAGCAAGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	23964074	23960174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_23960946_23961170_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
Isoform_26377_4	chr17	-	3407	9	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-36	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	43.4667617266343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGCTGCTGTGTGTC	7569	False	NA	-6	True	AATAAA	-18	NA	23990532	23971773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
Isoform_26378_13	chr17	-	3307	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-39	-12	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	24.7831410768016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTACAGAGCTGCTGT	7566	False	NA	-11	True	AATAAA	-13	NA	23990535	23971778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
Isoform_2638_3705	chr10	+	2436	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	3	0	2	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	3705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
Isoform_26382_3	chr17	-	2580	8	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	32	-9	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	46.0230643154016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGCAAATAATGTTG	7557	False	NA	NA	False	AATATA	-11	NA	23990544	23974402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
Isoform_26384_9	chr17	-	2503	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	-59	-1	21	1	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTTGTGTGTTTGAC	7546	False	NA	NA	False	AATATA	-21	NA	23990555	23974392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
Isoform_26385_3	chr17	-	681	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	13	0	13	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTAGTTTTTGTTGTTGT	NA	False	NA	0	True	AATAAA	-26	NA	24005042	23995889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_23996074_23998601_23999031_24004974
Isoform_26391_79	chr17	-	492	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	26	63	26	1	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGACTTTTCTGTTCC	NA	False	NA	-35	True	AATAAA	-19	NA	24048031	24043781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817
Isoform_26395_40	chr17	-	425	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	-11	0	11	0	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048099	24043782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
Isoform_26396_1530	chr17	-	436	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	35	66	-3	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTCTGTTCCCTCT	NA	False	NA	-31	True	AATAAA	-23	NA	24048075	24043777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_26397_525	chr17	-	523	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	9	5	9	2	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGCATTTCTCATTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	24048101	24043716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_26398_64	chr17	-	484	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-18	71	-18	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048128	24043782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_26399_26	chr17	-	567	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-33	3	-33	-1	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATTTCTCATTTTTA	NA	False	NA	-6	True	AGTAAA	-15	NA	24048143	24043714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
Isoform_26401_3	chr17	-	1162	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	-13	650	-13	544	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACAAAAAGCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	24063159	24060675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
Isoform_26403_847	chr17	-	2415	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	33	-5	33	5	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGAATATCTTGAA	NA	False	NA	-17	True	AATAAA	-25	NA	24292426	24266702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
Isoform_26412_113	chr17	-	1975	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	-18	5204	-18	-3	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24360587	24297857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
Isoform_26414_3	chr17	-	1677	11	ISM	ENSMUSG00000024122.17	ENSMUST00000115407.9	1730	12	-8	8922	-8	378	5prime_fragment	FALSE	canonical	3	123	junction_4	13.4836938559135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24360558	24306776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
Isoform_26415_221	chr17	-	1452	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	44	0	8	0	multi-exon	FALSE	canonical	3	306	junction_8	20.5156038175824	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382696	24374806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
Isoform_26416_47	chr17	-	1481	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	15	0	15	0	multi-exon	FALSE	canonical	3	306	junction_8	20.5156038175824	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382725	24374806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
Isoform_26418_6	chr17	-	1379	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	102.741435015946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382760	24374806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
Isoform_26419_5	chr17	-	1565	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	306	junction_8	20.5804653872442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382729	24374806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
Isoform_26421_3	chr17	-	1663	9	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-16	1	intron_retention	TRUE	canonical	3	306	junction_7	21.8288799529431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCGTCATGCTTTGA	NA	False	NA	-11	True	GATAAA	-21	NA	24382683	24374805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
Isoform_26422_1682	chr17	-	1141	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	43	-1	43	1	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	1682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388392	24382838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24383583_24383672_24383857_24388179
Isoform_26425_113	chr17	-	1953	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	14	199	14	-14	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGAGCTGGAGAGAT	3351	False	NA	-14	True	AATAAA	-7	NA	24439750	24434226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
Isoform_26426_110	chr17	-	2149	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	14	3	14	-3	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCGGGCAGTGGTGG	3351	False	NA	NA	False	NA	NA	NA	24439750	24434030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
Isoform_26428_6	chr17	-	2135	10	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	14	-12	intron_retention	FALSE	canonical	3	19	junction_8	65.8383729904126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	3351	False	NA	NA	False	NA	NA	NA	24439750	24434039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439495_24439590_24439664
Isoform_26430_22	chr17	-	2269	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	73	-182	12	-3	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCGGGCAGTGGTGG	3349	False	NA	NA	False	NA	NA	NA	24439752	24434030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
Isoform_26432_4	chr17	-	2493	8	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	-14	-12	intron_retention	FALSE	canonical	3	185	junction_7	20.9888211256587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	3360	False	NA	NA	False	NA	NA	NA	24439741	24434039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
Isoform_26436_44	chr17	-	3133	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-10	-1033	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8756	False	NA	-5	True	AATAAA	-18	NA	24470302	24442204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
Isoform_26438_1191	chr17	-	3019	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	81	1033	-10	-1033	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8756	False	NA	-5	True	AATAAA	-18	NA	24470302	24442204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_26439_199	chr17	-	2967	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	37	1129	-25	-1129	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTGTCTTTATTT	8712	False	NA	-13	True	NA	NA	NA	24470346	24442300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_26441_93	chr17	-	3105	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	-5	1033	-5	-1033	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGCTTCAACTG	8670	False	NA	-5	True	AATAAA	-18	NA	24470388	24442204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
Isoform_26449_5	chr17	-	2444	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	-14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.9149606242152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674285	24662769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24662820_24662839_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26450_31	chr17	-	2517	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.0980100079023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674267	24662769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26452_9	chr17	-	2462	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.5614523223349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674285	24662752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26453_34	chr17	-	2520	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8523378823506	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674267	24662769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26454_22	chr17	-	2561	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-19	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8523378823506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674308	24662769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24662820_24662841_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26456_3	chr17	-	2623	13	FSM	ENSMUSG00000024137.10	ENSMUST00000226941.2	2642	13	94	-75	-12	-14	multi-exon	FALSE	canonical	3	73	junction_5	15.7797338380595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAAAAAACCTGCAGT	NA	False	NA	-18	True	NA	NA	NA	24674272	24662769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
Isoform_26457_4	chr17	-	1381	2	FSM	ENSMUSG00000024137.10	ENSMUST00000226743.2	1377	2	-10	6	-10	-6	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7402	False	NA	NA	False	NA	NA	NA	24689175	24684437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24685707_24689063
Isoform_26459_25	chr17	-	3310	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	30	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9617	False	NA	0	True	AATAAA	-17	NA	24698022	24692524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
Isoform_26460_74	chr17	-	3330	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	30	-2	-1	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9617	False	NA	0	True	AATAAA	-17	NA	24698022	24692524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
Isoform_26461_6	chr17	-	1612	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	0	1746	0	3	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	9587	False	NA	NA	False	AATAAA	-17	NA	24698052	24694272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
Isoform_26462_3	chr17	-	3338	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234335.2	1574	9	-13	-1751	-4	0	multi-exon	FALSE	canonical	2	2	junction_8	26.1951808545007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9614	False	NA	0	True	AATAAA	-17	NA	24698025	24692524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697458_24697985
Isoform_26463_4	chr17	-	3443	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	60	junction_7	10.3509833901353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGAGGCCGATTGCTT	9617	False	NA	-2	True	AATAAA	-15	NA	24698022	24692526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
Isoform_26465_21	chr17	-	2613	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	100.719859014993	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746819	24727827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737769_24738104_24738221_24746739
Isoform_26466_43	chr17	-	2617	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_19	98.6916789805503	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738087_24738221_24746739
Isoform_26468_350	chr17	-	2600	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	115	288	-2	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_26469_65	chr17	-	2707	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	8	288	8	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746904	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_26471_15	chr17	-	2620	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	67	0	-2	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
Isoform_26473_143	chr17	-	2621	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746815	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_26475_28	chr17	-	2731	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746926	24727824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_26476_11	chr17	-	2504	20	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	100.54791721617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746797	24727827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24737715_24737774_24738104_24738221_24746739
Isoform_26477_43	chr17	-	2672	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	98.1200667549712	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746833	24727824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_26478_18	chr17	-	2653	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176668.8	2667	21	13	1	-4	-1	multi-exon	FALSE	canonical	3	46	junction_17	106.150647666418	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	24746811	24727824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_26481_35	chr17	-	2630	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	97.3074894342671	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
Isoform_26483_32	chr17	-	2618	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	105.422530798686	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746818	24727823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
Isoform_26486_29	chr17	-	1383	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	182	10	6	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	-12	True	AATAAA	-13	NA	24752680	24748037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
Isoform_26487_6	chr17	-	5433	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	34	-35	-1	3	multi-exon	FALSE	canonical	3	88	junction_15	40.1073674085831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGTCAGACAGCTTCTT	NA	False	NA	-8	True	NA	NA	NA	24851570	24815459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_26488_3	chr17	-	5579	41	FSM	ENSMUSG00000002496.11	ENSMUST00000226284.2	6266	41	15	672	-4	1	multi-exon	FALSE	canonical	3	45	junction_15	53.8189964139058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851586	24815461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_26489_5	chr17	-	5467	40	FSM	ENSMUSG00000002496.11	ENSMUST00000097373.2	6018	40	13	538	-8	-5	multi-exon	TRUE	canonical	3	83	junction_15	40.6087957618561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTTTATTTGACTTT	NA	False	NA	3	True	NA	NA	NA	24851590	24815448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
Isoform_26490_8	chr17	-	1266	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4233	1	4200	-1	3prime_fragment	FALSE	canonical	3	161	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	NA	False	NA	-7	True	ATTAAA	-16	NA	24859731	24858260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_24859364_24859568
Isoform_26491_24	chr17	-	783	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4231	486	4198	-2	3prime_fragment	FALSE	canonical	3	161	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTCTTACCCACCCT	NA	False	NA	-2	True	AATAAA	-19	NA	24859733	24858745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_24859364_24859568
Isoform_26492_71	chr17	-	2113	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	22	1	-16	-1	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	5163	False	NA	-7	True	ATTAAA	-16	NA	24869279	24858260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_26493_35	chr17	-	2134	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	0	2	0	-2	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	5141	False	NA	-8	True	ATTAAA	-15	NA	24869301	24858261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_26496_17	chr17	-	2050	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	-16	1	-16	-1	multi-exon	TRUE	canonical	3	15	junction_1	24.9671784549236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCGCCTGTGTGTTT	5163	False	NA	-7	True	ATTAAA	-16	NA	24869279	24858260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_26497_6	chr17	-	1592	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	-43	486	-5	-2	multi-exon	FALSE	canonical	3	15	junction_1	24.9671784549236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTCTTACCCACCCT	5136	False	NA	-2	True	AATAAA	-19	NA	24869306	24858745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
Isoform_26498_7	chr17	-	719	2	FSM	ENSMUSG00000071230.8	ENSMUST00000095544.6	638	2	-82	1	-82	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGCGTGTGACCCTTTT	8875	False	NA	NA	False	AATAAA	-19	NA	24877513	24876304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24876479_24876968
Isoform_265_456	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_+_1100_1600
Isoform_26500_15	chr17	-	1960	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	6	-1	6	1	multi-exon	FALSE	canonical	3	8	junction_2	5.18544972870135	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCCCTGGACTTAT	NA	False	NA	0	True	AATAAA	-24	NA	24908923	24904064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
Isoform_26501_6	chr17	-	1143	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.584843634779	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGCTGGTTTCTGTGTG	NA	False	NA	-12	True	AATAAA	-12	NA	24915061	24912165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24912587_24913148_24913417_24914227_24914425_24914804
Isoform_26502_3	chr17	-	1220	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.584843634779	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTCTGTGTGCTTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24915133	24912160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_24912587_24913148_24913417_24914227_24914425_24914804
Isoform_26503_8	chr17	-	670	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	0	12	0	-12	multi-exon	FALSE	canonical	3	24	junction_2	299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915064	24913170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24913417_24914227_24914392_24914804
Isoform_26504_3	chr17	-	759	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	-89	12	-23	-12	multi-exon	FALSE	canonical	3	24	junction_2	299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915153	24913170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24913417_24914227_24914392_24914804
Isoform_26505_56	chr17	-	772	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-3	1007	-3	-12	multi-exon	FALSE	canonical	3	527	junction_2	47.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915133	24913170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_26506_78	chr17	-	703	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	66	1007	0	-12	multi-exon	FALSE	canonical	3	527	junction_2	47.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915064	24913170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_26507_8	chr17	-	808	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-39	1007	-39	-12	multi-exon	FALSE	canonical	3	527	junction_2	47.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTTCTGTAGTTGA	NA	False	NA	-6	True	ATTAAA	-15	NA	24915169	24913170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24913417_24914227_24914425_24914804
Isoform_26509_949	chr17	-	2491	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	30	2705	1	-196	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926604	24919627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
Isoform_26510_13	chr17	-	2807	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	22	2397	-7	112	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGAGTCCCTTGTTCCTG	NA	False	NA	NA	False	AATACA	-15	NA	24926612	24919319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
Isoform_26514_774	chr17	-	656	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	74	2	8	-2	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTCTGGTGACTA	NA	False	NA	NA	False	AATAAA	-20	NA	24943378	24941035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
Isoform_26520_404	chr17	-	1401	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	20	6	1	0	multi-exon	FALSE	canonical	3	605	junction_4	56.4111888034831	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105302	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
Isoform_26521_25	chr17	-	1376	7	NIC	ENSMUSG00000039183.7	novel	1427	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_6	244.594051440341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105289	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105264
Isoform_26522_18	chr17	-	1413	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234579.2	1445	7	24	8	0	0	multi-exon	FALSE	canonical	3	14	junction_6	253.310580118557	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105289	25101592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
Isoform_26523_35	chr17	-	1405	7	FSM	ENSMUSG00000039183.7	ENSMUST00000235055.2	950	7	23	-478	0	0	multi-exon	FALSE	canonical	3	41	junction_5	246.619646419339	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105289	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105252
Isoform_26525_75	chr17	-	1202	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234352.2	1224	6	21	1	1	0	multi-exon	FALSE	canonical	3	81	junction_4	254.082191426318	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105302	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105252
Isoform_26527_15	chr17	-	2375	5	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	632	junction_1	50.0967813337344	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105312	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25104812_25105252
Isoform_26529_12	chr17	-	2613	4	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	632	junction_1	56.7587487137935	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105302	25101592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25102289_25102779_25103210_25103374_25104812_25105252
Isoform_26530_11	chr17	-	1507	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	-6	1	0	0	multi-exon	FALSE	canonical	3	43	junction_1	246.820953999723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105313	25101591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
Isoform_26531_22	chr17	-	1498	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	23	0	-2	0	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1887	False	NA	NA	False	GATAAA	-16	NA	25114038	25111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
Isoform_26532_7	chr17	-	1574	7	FSM	ENSMUSG00000073436.12	ENSMUST00000119848.8	5226	7	-14	3666	-7	0	multi-exon	FALSE	canonical	3	26	junction_1	3.80423740350444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1882	False	NA	NA	False	GATAAA	-16	NA	25114043	25111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
Isoform_26535_4	chr17	-	5443	32	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_22	16.9783482121344	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155929	25116506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
Isoform_26536_6	chr17	-	2737	6	ISM	ENSMUSG00000024163.18	ENSMUST00000115229.10	5603	32	0	18646	0	-798	5prime_fragment	FALSE	canonical	3	49	junction_1	8.77724330299668	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAAAAAATGTTTC	NA	False	NA	NA	False	NA	NA	NA	25155951	25135125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
Isoform_2654_6	chr10	+	1545	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	31	3	31	0	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	2	True	AATAAA	-12	NA	22034498	22059813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
Isoform_26540_835	chr17	-	2943	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	44	-315	0	315	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACAGCCTGTGTGTATTT	4817	False	NA	-7	True	ATTAAA	-12	NA	25179619	25161128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
Isoform_26552_47	chr17	-	3503	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	24	3	11	-3	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTGCTTCTGTGGTTC	NA	False	NA	-4	True	AATAAA	-18	NA	25334917	25318546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
Isoform_26555_13	chr17	-	3490	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	-55	-1	-6	1	multi-exon	FALSE	canonical	3	21	junction_20	19.5787512369916	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGGCTGCTTCTGTGG	NA	False	NA	-7	True	AATAAA	-15	NA	25334934	25318549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
Isoform_26556_12	chr17	-	1683	2	FSM	ENSMUSG00000024170.16	ENSMUST00000130525.2	1697	2	-19	33	-6	-33	multi-exon	FALSE	canonical	3	73	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	25334947	25333137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25334260_25334386
Isoform_26558_45	chr17	-	1151	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	107	-16	-107	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTCCATACTGATAAAAA	NA	False	NA	-22	True	AATAAA	-17	NA	25459114	25453397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_26559_13	chr17	-	1278	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	-20	-16	20	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACCATCTGGGTTAA	NA	False	NA	NA	False	AGTAAA	-16	NA	25459114	25453270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_2656_3	chr10	+	1312	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-42	4	-42	-4	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAGGTATGTGCTCCA	NA	False	NA	-2	True	AATAAA	-8	NA	22049377	22059809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
Isoform_26560_3	chr17	-	1348	10	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-16	20	intron_retention	FALSE	canonical	3	143	junction_5	13.752665286014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACCATCTGGGTTAA	NA	False	NA	NA	False	AGTAAA	-16	NA	25459114	25453270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
Isoform_26566_29	chr17	-	2956	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-336	-1796	-3	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4260	False	NA	-1	True	ATTAAA	-19	NA	25492844	25479483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_26567_386	chr17	-	2481	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	138	-1795	-13	1405	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4734	False	NA	-2	True	ATTAAA	-18	NA	25492370	25479484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_26568_69	chr17	-	2693	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-73	-1796	-7	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4523	False	NA	-1	True	ATTAAA	-19	NA	25492581	25479483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_26570_650	chr17	-	1074	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	138	-388	-13	-2	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4734	False	NA	NA	False	AATAAA	-12	NA	25492370	25480891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_26572_75	chr17	-	1285	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-73	-388	-7	-2	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4523	False	NA	NA	False	AATAAA	-12	NA	25492581	25480891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
Isoform_26578_25	chr17	-	2532	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-7	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4523	False	NA	-1	True	ATTAAA	-19	NA	25492581	25479483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_26579_20	chr17	-	2795	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-3	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4260	False	NA	-1	True	ATTAAA	-19	NA	25492844	25479483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_2658_3	chr10	+	2779	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGCTATTCATTGTAT	NA	False	NA	15	True	AATAAA	-8	NA	23672883	23703857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_26580_28	chr17	-	1387	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4260	False	NA	NA	False	AATAAA	-12	NA	25492844	25480891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_26581_36	chr17	-	1128	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGCATTATCATCA	4523	False	NA	NA	False	AATAAA	-16	NA	25492581	25480887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
Isoform_26585_21	chr17	-	2527	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	27	-1664	19	1405	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	3847	False	NA	-2	True	ATTAAA	-18	NA	25493257	25479484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
Isoform_26587_19	chr17	-	1144	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	2	-256	2	2	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	3822	False	NA	NA	False	AATAAA	-11	NA	25493282	25480892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
Isoform_26589_26	chr17	-	1120	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	27	-257	19	-2	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	3847	False	NA	NA	False	AATAAA	-12	NA	25493257	25480891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
Isoform_2659_31	chr10	+	2816	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	20	1	20	-1	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672903	23703865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_26598_7	chr17	-	2574	2	NNC	ENSMUSG00000050824.13	novel	2506	2	NA	NA	-16953	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTCTTTTCCAAAGCAAA	NA	False	NA	NA	False	AATAAA	-19	NA	25733215	25708847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_25711263_25733056
Isoform_2660_3	chr10	+	2581	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	-22	278	-22	-278	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATGTCTTTGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	23672861	23703588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_26607_131	chr17	-	3089	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	5	120	-4	0	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5679	False	NA	-17	True	TATAAA	-18	NA	25946388	25938019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
Isoform_26608_270	chr17	-	3064	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	30	120	-18	0	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5704	False	NA	-17	True	TATAAA	-18	NA	25946363	25938019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
Isoform_26609_449	chr17	-	3099	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-11	120	-2	0	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5672	False	NA	-17	True	TATAAA	-18	NA	25946395	25938019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
Isoform_2661_3	chr10	+	2663	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.1336695460678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTATTCATTCAAAA	NA	False	NA	25	True	AATAAA	-18	NA	23672901	23703867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
Isoform_26616_4	chr17	-	2154	15	ISM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	324	1	-26	-1	3prime_fragment	FALSE	canonical	3	34	junction_13	10.8984177844347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6916	False	NA	-3	True	AATAAA	-21	NA	25973027	25967587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747
Isoform_26618_31	chr17	-	2140	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	25	0	25	0	multi-exon	FALSE	canonical	3	34	junction_13	10.6111052937739	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6617	False	NA	-2	True	AATAAA	-22	NA	25973326	25967586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
Isoform_26619_63	chr17	-	2045	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	1	-2	0	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6592	False	NA	-2	True	AATAAA	-22	NA	25973351	25967586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_2662_3	chr10	+	2239	7	FSM	ENSMUSG00000037440.9	ENSMUST00000041416.8	2416	7	169	8	3	-8	multi-exon	FALSE	canonical	0	0	junction_4	1.59861050777091	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTCCAGTCTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	23770754	23781233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_23770990_23773190_23773322_23774305_23774499_23775291_23775584_23776482_23776842_23779283_23779455_23780375
Isoform_26620_8	chr17	-	2181	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-138	1	-138	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTCCTGTAGTGTTC	6453	False	NA	-5	True	AATAAA	-19	NA	25973490	25967589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_26621_4	chr17	-	2110	14	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	-28	0	intron_retention	TRUE	canonical	2	3	junction_13	17.5165179863711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6914	False	NA	-2	True	AATAAA	-22	NA	25973029	25967586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972747
Isoform_26622_10	chr17	-	2150	16	FSM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	-38	2	25	0	multi-exon	FALSE	canonical	1	2	junction_13	16.5577776286554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	6617	False	NA	-4	True	AATAAA	-20	NA	25973326	25967588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105
Isoform_26623_7	chr17	-	2054	17	FSM	ENSMUSG00000063011.8	ENSMUST00000236137.2	2054	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	16.7330838087305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTCCTGTAGTGTTC	6592	False	NA	-5	True	AATAAA	-19	NA	25973351	25967589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_26624_7	chr17	-	2360	16	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_15	10.4690018626419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6592	False	NA	-2	True	AATAAA	-22	NA	25973351	25967586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_26625_3	chr17	-	2739	14	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	43	junction_11	9.27808386665514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6592	False	NA	-3	True	AATAAA	-21	NA	25973351	25967587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105
Isoform_26626_3	chr17	-	2619	15	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	35	junction_14	10.7797997028077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6592	False	NA	-3	True	AATAAA	-21	NA	25973351	25967587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
Isoform_26627_49	chr17	-	1297	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	106	2	0	-1	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTGCAGGTCTGTTTA	4359	False	NA	-3	True	NA	NA	NA	26004541	26001764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
Isoform_26628_4	chr17	-	1783	6	NIC	ENSMUSG00000061046.10	novel	1405	9	NA	NA	2	-7	intron_retention	FALSE	canonical	3	42	junction_5	7.83326241102646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGTGGATCCTTCCA	4346	False	NA	-21	True	AATAAA	-28	NA	26004554	26001782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26002557_26002758_26002861_26003048_26003547_26003634_26003700_26003977_26004169_26004401
Isoform_26629_10	chr17	-	1382	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	497	7	-9	-1	multi-exon	FALSE	canonical	3	227	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8361	False	NA	-8	True	AATAAA	-16	NA	26011378	26009480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26009753_26009906_26009958_26010319
Isoform_2663_39	chr10	+	2339	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	60	-1	60	1	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGCTTGGCTGTTCATT	NA	False	NA	6	True	AATAAA	-22	NA	24471399	24474577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
Isoform_26630_6	chr17	-	1266	4	FSM	ENSMUSG00000057411.10	ENSMUST00000235327.2	1267	4	0	1	0	-1	multi-exon	FALSE	canonical	3	179	junction_3	24.4449494897321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8392	False	NA	-8	True	AATAAA	-16	NA	26011347	26009480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545
Isoform_26631_42	chr17	-	880	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	435	6	10	-1	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8402	False	NA	-8	True	AATAAA	-16	NA	26011337	26009480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
Isoform_26632_7	chr17	-	612	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	14	1	0	-1	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	8392	False	NA	-8	True	AATAAA	-16	NA	26011347	26009480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
Isoform_26633_3	chr17	-	999	4	NIC	ENSMUSG00000057411.10	novel	1321	5	NA	NA	-5	1	intron_retention	FALSE	canonical	3	112	junction_3	55.934485486743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCTGACTTTTGTTTG	8365	False	NA	-11	True	AATAAA	-13	NA	26011374	26009483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26009753_26009906_26009958_26010319_26010651_26011026
Isoform_26634_5	chr17	-	4959	6	Fusion	ENSMUSG00000002274.14_ENSMUSG00000057411.10	novel	987	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	84	junction_4	68.0311693270077	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	5883	False	NA	-8	True	AATAAA	-16	NA	26016067	26009480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr17_-_26009753_26009906_26009958_26010319_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_26635_5	chr17	-	2183	2	FSM	ENSMUSG00000002274.14	ENSMUST00000237849.2	1175	2	-1012	4	-10	-4	multi-exon	FALSE	canonical	3	97	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5883	False	NA	-6	True	NA	NA	NA	26016067	26013802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347
Isoform_26636_4	chr17	-	1309	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235294.2	1198	4	-38	-73	-10	-3	multi-exon	FALSE	canonical	1	3	junction_2	43.8482230730809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCACTGTAGTCATGGT	5883	False	NA	-5	True	NA	NA	NA	26016067	26013801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347_26014408_26015059_26015616_26015838
Isoform_26637_4	chr17	-	865	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235925.2	698	4	-125	-42	-10	0	multi-exon	FALSE	canonical	2	10	junction_3	38.3173879879908	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5883	False	NA	-2	True	NA	NA	NA	26016067	26013798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347_26014408_26015214_26015324_26015838
Isoform_26638_7	chr17	-	2761	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTTTGGAGGGTAACA	5883	False	NA	NA	False	AATACA	-42	NA	26016067	26012194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_26639_134	chr17	-	1157	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-10	1604	-10	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5883	False	NA	-2	True	NA	NA	NA	26016067	26013798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_2664_3	chr10	+	2400	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	-4	2	-4	-2	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAAGGCTTGGCTGTTC	NA	False	NA	3	True	AATAAA	-19	NA	24471335	24474574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
Isoform_26641_8	chr17	-	1356	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-6	1401	-6	203	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTTTGTTTG	5887	False	NA	0	True	NA	NA	NA	26016063	26013595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
Isoform_26642_10	chr17	-	1962	3	NIC	ENSMUSG00000002274.14	novel	1198	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	95	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACTGTAGTCATGGTC	5883	False	NA	-4	True	NA	NA	NA	26016067	26013800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26014266_26014347_26015616_26015838
Isoform_26643_4	chr17	-	1235	3	NIC	ENSMUSG00000002274.14	novel	2751	4	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	84	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5883	False	NA	-6	True	NA	NA	NA	26016067	26013802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26014408_26015214_26015616_26015838
Isoform_26644_47	chr17	-	1232	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	442	129	0	0	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6787	False	NA	-17	True	AATAAA	-17	NA	26051893	26049607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
Isoform_26648_58	chr17	-	2453	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	355	381	29	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGGATTTTGATCTCT	6042	False	NA	-2	True	ATTAAA	-19	NA	26063470	26057811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_26650_34	chr17	-	2482	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	326	381	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGGATTTTGATCTCT	6013	False	NA	-2	True	ATTAAA	-19	NA	26063499	26057811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_26651_54	chr17	-	2833	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	355	1	29	-1	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGCTGTTTTTGTG	6042	False	NA	-1	True	NA	NA	NA	26063470	26057431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_26652_19	chr17	-	2862	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	326	1	0	-1	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGCTGTTTTTGTG	6013	False	NA	-1	True	NA	NA	NA	26063499	26057431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_26654_4	chr17	-	2967	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	29	-1	intron_retention	FALSE	canonical	3	133	junction_17	11.3057538096384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGCTGTTTTTGTG	6042	False	NA	-1	True	NA	NA	NA	26063470	26057431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
Isoform_26655_7	chr17	-	880	5	NIC	ENSMUSG00000025732.7	novel	842	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	117.099049953448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7772	False	NA	-4	True	AATAAA	-15	NA	26087728	26082671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26083014_26083176_26083327_26083567_26083696_26087387_26087518_26087598
Isoform_26656_15	chr17	-	898	4	ISM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	25	0	-2	0	intron_retention	FALSE	canonical	3	256	junction_1	25.0377492776186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7787	False	NA	-4	True	AATAAA	-15	NA	26087713	26082671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387
Isoform_26657_106	chr17	-	811	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	31	0	1	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7793	False	NA	-4	True	AATAAA	-15	NA	26087707	26082671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
Isoform_26659_5	chr17	-	2615	8	NNC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	94.949180822035	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTGTCTGGCTTCAT	NA	False	NA	-3	True	AGTAAA	-15	NA	26138712	26101089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26126803_26126931_26138338_26138524_26138625
Isoform_2666_13	chr10	+	4848	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-53	3	8	-3	multi-exon	TRUE	canonical	2	39	junction_7	9.84419439392103	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24745891	24789355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
Isoform_26660_21	chr17	-	2539	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	-35	2	3	1	multi-exon	FALSE	canonical	3	194	junction_1	13.251415018782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTGTCTGGCTTCAT	NA	False	NA	-3	True	AGTAAA	-15	NA	26138661	26101089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
Isoform_26662_3	chr17	-	2366	7	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	79.9284402172065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTGTGTCTGGCTTC	NA	False	NA	-5	True	AGTAAA	-13	NA	26138683	26101091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138433_26138625
Isoform_26663_254	chr17	-	2438	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	28	0	4	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138660	26101087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
Isoform_26664_4	chr17	-	2499	7	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	81.0337721090548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138708	26101087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138537_26138625
Isoform_26666_19	chr17	-	3054	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	113	6	0	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160909	26145400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
Isoform_26668_6	chr17	-	4945	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-16	-1	intron_retention	TRUE	canonical	0	0	junction_4	23.9282260103001	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	1706	False	NA	-10	True	AATAAA	-17	NA	26204786	26177341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
Isoform_2667_7	chr10	+	4301	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	84	0	26	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235779	25399413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_26672_5	chr17	-	2882	5	ISM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	27	24335	27	-9720	5prime_fragment	FALSE	canonical	3	82	junction_3	16.7984374273323	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	26288492	26232344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
Isoform_26673_49	chr17	-	2139	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	59	26	-3	-7	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGACTGATTCTA	NA	False	NA	-30	True	NA	NA	NA	26309252	26300210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_26674_79	chr17	-	1983	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	215	26	98	-7	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGACTGATTCTA	NA	False	NA	-30	True	NA	NA	NA	26309096	26300210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_26675_54	chr17	-	2054	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	144	26	27	-7	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGACTGATTCTA	NA	False	NA	-30	True	NA	NA	NA	26309167	26300210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
Isoform_2668_3	chr10	+	4365	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	20	0	20	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235715	25399413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_26682_3	chr17	-	1903	9	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	27	-25	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	57.9427249531811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGTTTCTAGACAGAAA	NA	False	NA	-48	True	NA	NA	NA	26309167	26300228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26309070
Isoform_26683_8	chr17	-	1912	8	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	98	-9	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	60.1518486661814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATTGACTGATTC	NA	False	NA	-32	True	NA	NA	NA	26309096	26300212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26308937
Isoform_26685_20	chr17	-	919	6	FSM	ENSMUSG00000024177.10	ENSMUST00000236547.2	926	6	0	7	0	-3	multi-exon	FALSE	canonical	3	25	junction_1	147.011019995101	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26311127_26311480_26311532_26312590_26312704_26312832_26312935_26313110_26313245_26314338
Isoform_26686_191	chr17	-	868	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	129	9	0	-3	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
Isoform_2669_77	chr10	+	4089	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	26	0	26	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235779	25399411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_26691_24	chr17	-	997	4	NIC	ENSMUSG00000024177.10	novel	926	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	304	junction_1	22.7596133534821	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26311127_26312590_26312935_26313110_26313245_26314338
Isoform_26692_7	chr17	-	1173	3	FSM	ENSMUSG00000024177.10	ENSMUST00000236112.2	1176	3	0	3	0	-3	multi-exon	FALSE	canonical	3	304	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAATGGTCTACTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	26314447	26310716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26311127_26312590_26313245_26314338
Isoform_26695_11	chr17	-	965	2	FSM	ENSMUSG00000024177.10	ENSMUST00000150280.3	995	2	12	18	0	-18	multi-exon	FALSE	canonical	3	319	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	26314447	26312388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26313245_26314338
Isoform_26696_7	chr17	-	950	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	82	0	82	0	multi-exon	TRUE	canonical	3	81	junction_2	6.72309452558864	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420242	26418156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
Isoform_26698_24	chr17	-	2851	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	-9	-9	0	9	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCAGTCTGTCTGGA	1919	False	NA	-8	True	AATAAA	-40	NA	26463197	26431674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
Isoform_26699_91	chr17	-	2790	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	54	-11	8	-8	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1982	False	NA	-6	True	AATAAA	-42	NA	26463134	26431672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
Isoform_267_510	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV2_+_4000_4500
Isoform_26700_48	chr17	-	2835	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	0	879	0	9	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGCAGTCTGTCTGGA	1919	False	NA	-8	True	AATAAA	-40	NA	26463197	26431674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_26701_168	chr17	-	2760	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	63	891	8	0	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	1982	False	NA	-20	True	AATAAA	-28	NA	26463134	26431686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_26702_13	chr17	-	2840	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	63.7958440826847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTGTCTGGATGTCT	1919	False	NA	-3	True	AATAAA	-45	NA	26463197	26431669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
Isoform_26703_22	chr17	-	2747	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234262.2	2774	13	8	19	8	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1982	False	NA	-17	True	AATAAA	-31	NA	26463134	26431683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
Isoform_26704_15	chr17	-	2794	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234554.2	2828	13	26	8	18	-8	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1946	False	NA	-6	True	AATAAA	-42	NA	26463170	26431672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
Isoform_26706_17	chr17	-	2699	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	47	3	19	0	multi-exon	FALSE	canonical	3	10	junction_11	62.3582027847616	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	1947	False	NA	-20	True	AATAAA	-28	NA	26463169	26431686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
Isoform_26707_24	chr17	-	2662	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	-19	-14	8	-8	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1982	False	NA	-6	True	AATAAA	-42	NA	26463134	26431672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
Isoform_26708_16	chr17	-	2722	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	-82	-11	0	8	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCAGTCTGTCTGG	1919	False	NA	-9	True	AATAAA	-39	NA	26463197	26431675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
Isoform_26709_15	chr17	-	2749	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.4886028783956	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	1975	False	NA	-20	True	AATAAA	-28	NA	26463141	26431686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_26710_8	chr17	-	2827	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.4886028783956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1911	False	NA	-6	True	AATAAA	-42	NA	26463205	26431672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
Isoform_26712_819	chr17	-	1942	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	47	1	0	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727446	26724564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
Isoform_26713_36	chr17	-	2005	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	-16	1	-16	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727509	26724564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
Isoform_2672_5	chr10	+	4281	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-6	1	intron_retention	FALSE	canonical	3	30	junction_1	82.0204633087627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25308490	25399412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_25308782_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
Isoform_26720_10	chr17	-	2280	3	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	466	junction_1	9.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727450	26724564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26726179_26726547_26726694_26726930
Isoform_26722_102	chr17	-	935	5	ISM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	86	-1	7	0	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
Isoform_26727_131	chr17	-	711	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	112	0	7	0	intron_retention	FALSE	canonical	3	511	junction_5	169.834507683215	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
Isoform_26729_166	chr17	-	651	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	90	0	-15	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9342	False	NA	-17	True	AATAAA	-18	NA	27158453	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_26730_16	chr17	-	716	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	25	0	-1	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9277	False	NA	-17	True	AATAAA	-18	NA	27158518	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_26731_127	chr17	-	599	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	64	-1	-15	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9342	False	NA	-17	True	AATAAA	-18	NA	27158453	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
Isoform_26732_16	chr17	-	665	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	-2	-1	0	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9276	False	NA	-17	True	AATAAA	-18	NA	27158519	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
Isoform_26734_75	chr17	-	872	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	69	-4	-12	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9345	False	NA	-17	True	AATAAA	-18	NA	27158450	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
Isoform_26735_10	chr17	-	916	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	25	-4	1	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9301	False	NA	-17	True	AATAAA	-18	NA	27158494	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
Isoform_26739_16	chr17	-	1044	4	ISM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-34	-1	7	0	intron_retention	FALSE	canonical	3	921	junction_2	26.8865931067677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857
Isoform_26742_28	chr17	-	810	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-24	-1	1	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9374	False	NA	-17	True	AATAAA	-18	NA	27158421	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
Isoform_26743_22	chr17	-	757	6	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	300	junction_5	273.070979783645	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9345	False	NA	-17	True	AATAAA	-18	NA	27158450	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290_27158343_27158424
Isoform_26744_10	chr17	-	708	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	227	junction_4	311.485954739536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9342	False	NA	-17	True	AATAAA	-18	NA	27158453	27156945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158424
Isoform_26752_135	chr17	-	1940	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	444	3	13	-1	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCGCCTGGCATCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	27247539	27238786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
Isoform_26753_72	chr17	-	2001	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	383	3	-39	-1	multi-exon	FALSE	canonical	3	126	junction_3	5.45527267879434	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCGCCTGGCATCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	27247600	27238786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
Isoform_26756_901	chr17	-	464	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	31	5	17	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1978	False	NA	-3	True	AATAAA	-19	NA	27352859	27341641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
Isoform_26757_70	chr17	-	487	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	8	5	-6	0	multi-exon	FALSE	canonical	3	2713	junction_1	153.559977424675	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	1955	False	NA	-3	True	AATAAA	-19	NA	27352882	27341641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
Isoform_26759_547	chr17	-	2594	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	31	2	31	-2	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTTTATTTGTGGT	8024	False	NA	-3	True	AATAAA	-17	NA	27423412	27408575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
Isoform_2676_5	chr10	+	499	2	ISM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-164	58373	-8	-58373	5prime_fragment	FALSE	canonical	3	171	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	27950841	28082296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_27951174_28082129
Isoform_26764_10	chr17	-	3323	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	30	-5	intron_retention	FALSE	canonical	3	431	junction_6	64.6791137470362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATGTGGTTTTATTTGT	8023	False	NA	-6	True	AATAAA	-14	NA	27423413	27408578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
Isoform_26767_20	chr17	-	2135	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	18	-4	18	4	multi-exon	TRUE	canonical	3	72	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGACTTGGGTTTTTT	6267	False	NA	-5	True	NA	NA	NA	27461615	27454044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27456112_27461547
Isoform_26768_3	chr17	-	1683	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-13	479	-13	-479	multi-exon	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTATGTGAATATG	6236	False	NA	NA	False	NA	NA	NA	27461646	27454527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27456112_27461547
Isoform_2677_19	chr10	+	4737	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-8	71	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	27950841	28472033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_26770_56	chr17	-	595	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	70	197	-10	1	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCCTCCTTGGGTGGA	NA	False	NA	48	True	AATAAA	-17	NA	27784660	27782743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
Isoform_26772_7	chr17	-	2050	5	FSM	ENSMUSG00000024213.15	ENSMUST00000114886.8	996	5	130	-1184	10	-3	multi-exon	FALSE	canonical	1	1	junction_4	152.175063660246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27841808	27798363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27841564
Isoform_26773_468	chr17	-	2188	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	27	8	27	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842442	27798363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_26774_47	chr17	-	2210	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	5	8	5	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842464	27798363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_26776_7	chr17	-	2278	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	-63	8	-63	-3	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCTCTTTGTTC	NA	False	NA	-26	True	AATAAA	-15	NA	27842532	27798363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
Isoform_2678_3	chr10	+	4743	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-7	81	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_13	36.8965194972466	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950842	28472043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
Isoform_2679_3	chr10	+	2211	6	FSM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	17	-383	17	383	multi-exon	FALSE	canonical	3	12	junction_1	32.6643536596088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAATCTCACGACCTA	NA	False	NA	4	True	AATAAA	-20	NA	29189178	29221939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_29189294_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
Isoform_26790_2692	chr17	-	569	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	304	14	-1	-8	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAACATGTCCACTTG	NA	False	NA	NA	False	AATAAA	-6	NA	27854215	27849405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
Isoform_26791_165	chr17	-	622	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	251	14	-50	-8	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAACATGTCCACTTG	NA	False	NA	NA	False	AATAAA	-6	NA	27854268	27849405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
Isoform_26794_5	chr17	-	3869	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	2	21	2	-10	multi-exon	FALSE	canonical	3	33	junction_4	5.43139024560011	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCCGCCTTT	NA	False	NA	-22	True	ATTAAA	-13	NA	28039597	27970229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
Isoform_26795_49	chr17	-	2712	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-1491	-1	27	-1	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28128189	28120100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_26799_117	chr17	-	1235	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-14	-1	-3	-1	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGGGTTTCTCTGTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	28126712	28120100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_2680_17	chr10	+	1917	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	31	1908	31	1	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGTCCATTCCAGA	NA	False	NA	3	True	AATAGA	-14	NA	29189526	29221557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
Isoform_26800_8	chr17	-	1167	6	NNC	ENSMUSG00000024218.14	novel	2207	6	NA	NA	-38	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.2483469164679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAAAGTTTATTTTAT	NA	False	NA	-28	True	ATTAAA	-14	NA	28126747	28120183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_28120281_28120300_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_26802_5	chr17	-	1119	6	NNC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	0	-80	at_least_one_novel_splicesite	FALSE	non_canonical	2	54	junction_1	40	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAAGTTTATTTTATTT	NA	False	NA	-26	True	ATTAAA	-16	NA	28126698	28120181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_28120278_28120298_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
Isoform_26803_4	chr17	-	2099	6	NIC	ENSMUSG00000024218.14	novel	2207	6	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	59.2702286143727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACAGGGTTTCTCTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	28128104	28120102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127743
Isoform_2681_19	chr10	+	2270	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	66	1520	66	389	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACGACCTATGGATC	NA	False	NA	10	True	AATAAA	-26	NA	29189561	29221945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
Isoform_26811_78	chr17	-	2886	7	NNC	ENSMUSG00000024222.18	novel	1414	7	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCATTGTTCATGGC	NA	False	NA	-15	True	AATAAA	-14	NA	28637488	28618071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
Isoform_26812_175	chr17	-	2933	7	NIC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	192.900377282046	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637488	28618070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
Isoform_26817_1122	chr17	-	3484	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	56	3	0	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705067	28618070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_26818_378	chr17	-	3532	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	8	3	8	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705115	28618070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_26819_32	chr17	-	3566	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	-26	3	-26	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705149	28618070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
Isoform_2683_242	chr10	+	836	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	22	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	20	True	ATTAAA	-27	NA	31189400	31204200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
Isoform_26830_180	chr17	-	2456	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	255	1942	-3	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841428	28808563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26831_44	chr17	-	2493	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	218	1942	-4	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841465	28808563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26834_8	chr17	-	2301	15	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	192.858201055298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841487	28808563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26835_13	chr17	-	2829	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	34	1941	-2	1	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTTCTATGCTCACA	NA	False	NA	-1	True	ATTAAA	-40	NA	28841427	28808562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26845_168	chr17	-	851	9	FSM	ENSMUSG00000004865.17	ENSMUST00000233129.2	981	9	-34	164	-2	-164	multi-exon	FALSE	canonical	3	656	junction_8	93.865595401084	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGACACAGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	28841459	28819841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26847_32	chr17	-	884	9	FSM	ENSMUSG00000004865.17	ENSMUST00000233129.2	981	9	-67	164	-31	-164	multi-exon	FALSE	canonical	3	656	junction_8	93.865595401084	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGACACAGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	28841492	28819841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
Isoform_26849_8	chr17	-	984	3	FSM	ENSMUSG00000045378.6	ENSMUST00000051526.6	1019	3	32	3	32	0	multi-exon	FALSE	canonical	3	18	junction_2	5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTGTGTGTCTCT	6245	False	NA	-1	True	AATAAA	-15	NA	29161206	29152960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29153781_29160215_29160344_29161170
Isoform_2685_930	chr10	+	2000	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	3	2	3	-1	multi-exon	FALSE	canonical	3	1084	junction_4	88.4199902429095	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTTTTCTGTCTGTTTA	NA	False	NA	12	True	ATTAAA	-13	NA	36850542	36877883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
Isoform_26850_4	chr17	-	2483	14	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	211.745353371818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226927	29189860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_29190832_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
Isoform_26851_163	chr17	-	3305	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	44	2	0	-2	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTGGATTTCTTTT	NA	False	NA	0	True	AATAAA	-19	NA	29226925	29189855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
Isoform_26854_29	chr17	-	3304	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	44	6	0	-6	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226925	29189859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
Isoform_26857_3	chr17	-	2115	5	ISM	ENSMUSG00000024006.18	ENSMUST00000144516.9	1186	6	-108	3156	-3	1217	5prime_fragment	FALSE	canonical	3	701	junction_2	38.7749919406826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGGCTAAGCCTTGAAT	NA	False	NA	NA	False	NA	NA	NA	29226935	29205679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
Isoform_2686_10	chr10	+	2252	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	-247	0	-247	0	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	14	True	ATTAAA	-15	NA	36850292	36877885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
Isoform_26860_6	chr17	-	1109	2	ISM	ENSMUSG00000024006.18	ENSMUST00000232723.2	627	4	-66	8120	-13	-1737	5prime_fragment	FALSE	canonical	3	706	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	29226952	29218274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_29219116_29226684
Isoform_26862_3	chr17	-	2164	8	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7237	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	36.9378960319251	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	9808	False	NA	-7	True	AGTAAA	-16	NA	29385716	29376887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385471
Isoform_26863_3	chr17	-	2019	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7941	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	34	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	9104	False	NA	-7	True	AGTAAA	-16	NA	29386420	29376887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29386382
Isoform_26864_3	chr17	-	2446	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1441	6	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCCCTCTCCTTTGAA	6683	False	NA	-3	True	AGTAAA	-20	NA	29404518	29376883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
Isoform_26865_74	chr17	-	2439	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-4999	6	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCCCTCTCCTTTGAA	3125	False	NA	-3	True	AGTAAA	-20	NA	29408076	29376883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
Isoform_26866_4	chr17	-	2619	14	ISM	ENSMUSG00000024008.17	ENSMUST00000024805.15	5708	21	35406	2358	-18658	2	3prime_fragment	FALSE	canonical	3	19	junction_13	23.8741770823823	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGACCCCCCCTCTCCTT	8812	False	NA	-7	True	AGTAAA	-16	NA	29421735	29376887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478
Isoform_26868_15	chr17	-	1293	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	714.950969569864	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTGTTGTGGTCTAGT	9693	False	NA	-30	True	AATAAA	-17	NA	29483156	29469807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_29470700_29471223_29471293_29480710_29480866_29482979
Isoform_26871_1118	chr17	-	1190	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	241	31	3	-2	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTGTTGTGGTCTAGT	9930	False	NA	-30	True	AATAAA	-17	NA	29482919	29469807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
Isoform_26873_31	chr17	-	1420	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	17	25	17	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9706	False	NA	-24	True	AATAAA	-23	NA	29483143	29469801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
Isoform_26878_31	chr17	-	1809	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	137	6	-27	-2	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566771	29551051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_26879_149	chr17	-	1775	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	173	4	9	0	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566735	29551049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_26880_46	chr17	-	1753	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	142	2	-22	-2	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566766	29551051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_26881_176	chr17	-	1724	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	173	0	9	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566735	29551049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
Isoform_26883_47	chr17	-	416	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	39	942	3	139	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTCCTGCTGACAAGG	NA	False	NA	-3	True	AATAAA	-26	NA	29935979	29923247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
Isoform_26884_44	chr17	-	2282	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	202	4574	-24	1	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	30795260	30439071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_26885_63	chr17	-	2257	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	229	4572	0	3	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30795233	30439069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_26886_20	chr17	-	2477	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	9	4572	9	3	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30795453	30439069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
Isoform_26888_138	chr17	-	855	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	41	-1	-6	1	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831592	30811838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_26891_263	chr17	-	1909	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	27	7929	-20	1	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831606	30811838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_26893_549	chr17	-	1883	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	53	7929	-4	1	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831580	30811838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_26897_19	chr17	-	3511	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	41	6313	-6	1612	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAGTCATGAGGCT	NA	False	NA	-8	True	NA	NA	NA	30831592	30810222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
Isoform_269_506	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	1	-1	1	1	multi-exon	FALSE	canonical	3	5391	junction_1	17	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTGTATGGCGGAC	NA	False	NA	NA	False	NA	NA	NA	1981	999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_-_1168_1532_1765_1902
Isoform_2691_9	chr10	+	2650	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-31	310	16	-310	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATGTTTTTTGAGAC	NA	False	NA	NA	False	AATAAA	-28	NA	39009987	39026744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_26910_3	chr17	-	955	3	ISM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	1726	12	1726	-12	3prime_fragment	FALSE	canonical	3	280	junction_2	76	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTGACCGAATTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	30844153	30841426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_30841669_30843173_30843588_30843854
Isoform_26911_64	chr17	-	801	4	FSM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	34	10	34	-10	multi-exon	FALSE	canonical	3	145	junction_3	117.235754879739	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30845845	30841424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755
Isoform_26912_15	chr17	-	802	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-660	-8	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCGAATTCTTTCCT	NA	False	NA	-9	True	AATAAA	-17	NA	30846539	30841422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_30841669_30845755_30846170_30846397
Isoform_26913_3	chr17	-	981	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-842	-11	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGACCGAATTCTTT	NA	False	NA	-12	True	AATAAA	-14	NA	30846721	30841425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_30841669_30845755_30846170_30846397
Isoform_26915_14	chr17	-	1111	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	77	3	32	-3	multi-exon	FALSE	canonical	3	52	junction_8	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCCTCTGATGTCGC	NA	False	NA	-4	True	AATAAA	-23	NA	31496280	31473995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
Isoform_26916_3	chr17	-	1199	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	-13	5	-13	1	multi-exon	FALSE	canonical	3	52	junction_8	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGAGCCTCTGATGTC	NA	False	NA	-6	True	AATAAA	-21	NA	31496370	31473997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
Isoform_26917_505	chr17	-	1913	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	457	1784	-11	16	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCCTCCATAGCTGA	NA	False	NA	-1	True	AATAAA	-33	NA	31731268	31715079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
Isoform_26918_81	chr17	-	3697	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	457	0	-11	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731268	31713295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
Isoform_26921_8	chr17	-	1930	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGAATGTTCAGCAGCA	NA	False	NA	-15	True	AATAAA	-19	NA	31731238	31715093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
Isoform_26924_29	chr17	-	2443	17	FSM	ENSMUSG00000024039.16	ENSMUST00000067801.14	2533	17	73	17	0	0	multi-exon	FALSE	canonical	3	42	junction_16	84.4695766237762	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGTGTCGACCTTATTT	1945	False	NA	-16	True	NA	NA	NA	31856139	31831613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
Isoform_26926_175	chr17	-	2433	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	45	3748	11	-1	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1956	False	NA	-18	True	NA	NA	NA	31856128	31831615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
Isoform_26928_54	chr17	-	2399	16	FSM	ENSMUSG00000024039.16	ENSMUST00000118504.9	2474	16	73	2	0	-1	multi-exon	FALSE	canonical	3	42	junction_15	69.6264317626575	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1945	False	NA	-18	True	NA	NA	NA	31856139	31831615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
Isoform_26930_292	chr17	-	2402	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	0	1	0	-1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1945	False	NA	-18	True	NA	NA	NA	31856139	31831615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
Isoform_26934_34	chr17	-	931	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	43	1	-9	-1	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877686	31866056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
Isoform_26935_1248	chr17	-	888	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	158	0	4	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877708	31866054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
Isoform_26939_123	chr17	-	889	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	34	0	3	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877709	31866054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
Isoform_2694_6	chr10	+	1660	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-63	1332	-16	0	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGGTTTCTATTTTAT	NA	False	NA	7	True	NA	NA	NA	39009955	39025722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_26943_130	chr17	-	3439	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	8	1074	-3	-1074	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTTTTCTATTTTGT	NA	False	NA	-20	True	TATAAA	-17	NA	32074770	32064297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_26945_131	chr17	-	2689	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-22	1854	-22	928	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGTTTTT	NA	False	NA	-18	True	NA	NA	NA	32074800	32065077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_26946_21	chr17	-	3568	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-53	1006	-53	-1006	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTGTCCCCATGTTTG	NA	False	NA	1	True	NA	NA	NA	32074831	32064229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
Isoform_26950_11	chr17	-	1735	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGGGTTTAGGAAGT	NA	False	NA	-16	True	AATAAA	-27	NA	32253494	32165058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
Isoform_26951_16	chr17	-	2480	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-12	399	-12	-399	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	32253494	32164141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26952_21	chr17	-	1717	9	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	175	at_least_one_novel_splicesite	FALSE	non_canonical	3	53	junction_1	394.529129944799	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGTGCCTGTGCATGT	NA	False	NA	-4	True	ATTAAA	-30	NA	32253494	32164880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_32164934_32164957_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26953_307	chr17	-	1563	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-12	1316	-12	-3	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGGGTTTAGGAAGT	NA	False	NA	-16	True	AATAAA	-27	NA	32253494	32165058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26955_29	chr17	-	1408	7	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATCTTGGGTTTAGGA	NA	False	NA	-19	True	AATAAA	-24	NA	32253492	32165061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
Isoform_26958_10	chr17	-	2378	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	15	-914	-14	-399	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	32253496	32164141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26959_16	chr17	-	1638	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	17	-176	-12	176	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTGCCTGTGCATGTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32253494	32164879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26960_130	chr17	-	1461	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	17	1	-12	-1	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGGTTTAGGAAGTGG	NA	False	NA	-14	True	AATAAA	-29	NA	32253494	32165056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
Isoform_26961_11	chr17	-	1304	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATCTTGGGTTTAGGA	NA	False	NA	-19	True	AATAAA	-24	NA	32253492	32165061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
Isoform_26963_4	chr17	-	1547	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	42	2	42	-2	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCCGGTCTGATGTTT	1036	False	NA	NA	False	CATAAA	-24	NA	32408481	32403635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
Isoform_26967_9	chr17	-	2477	7	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-69	-3	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	67.834971315195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	5236	False	NA	-7	True	AATAAA	-16	NA	32420051	32415250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975
Isoform_26968_6	chr17	-	2577	6	ISM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	83020	2	-69	-2	3prime_fragment	FALSE	canonical	3	175	junction_5	52.9127583858562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	5236	False	NA	-6	True	AATAAA	-17	NA	32420051	32415249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975
Isoform_2697_5	chr10	+	2872	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-31	88	16	-88	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTCTTCAAGCATTC	NA	False	NA	NA	False	AAGAAA	-11	NA	39009987	39026966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
Isoform_26970_3	chr17	-	2122	10	NIC	ENSMUSG00000024002.19	novel	2118	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	91.7974151711189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGACAAAGAAAAATAAC	NA	False	NA	83	True	NA	NA	NA	32503702	32432540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
Isoform_26974_11	chr17	-	2056	10	NIC	ENSMUSG00000024002.19	novel	2118	11	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	87	junction_9	69.0524938983397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGACAAAGAAAAATAAC	NA	False	NA	83	True	NA	NA	NA	32503639	32432540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
Isoform_26975_3	chr17	-	1828	9	FSM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	-9	4	-9	-4	multi-exon	FALSE	canonical	3	24	junction_8	78.3700157904795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGACAAAGAAAAATAAC	NA	False	NA	83	True	NA	NA	NA	32503116	32432540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
Isoform_26977_27	chr17	-	1961	9	FSM	ENSMUSG00000024002.19	ENSMUST00000127893.8	1910	9	-8	-43	-8	-4	multi-exon	FALSE	canonical	3	148	junction_8	42.5850252436229	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGACAAAGAAAAATAAC	NA	False	NA	83	True	NA	NA	NA	32503704	32432540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
Isoform_26980_81	chr17	-	2691	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	22	1018	-4	2	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTGTTTTTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	32540137	32523663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
Isoform_26981_40	chr17	-	3702	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	26	3	0	-1	multi-exon	TRUE	canonical	3	426	junction_6	74.0811964579343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTGTGTTCATTAAT	NA	False	NA	-4	True	AATAAA	-13	NA	32540133	32522648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
Isoform_26985_7	chr17	-	2279	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-6	1	intron_retention	FALSE	canonical	2	21	junction_6	156.075708124829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTTTGTGCTGTGGT	NA	False	NA	1	True	AATAAA	-18	NA	32569557	32540396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26987_6	chr17	-	2677	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	33	0	intron_retention	FALSE	canonical	3	32	junction_5	144.599677270271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569516	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_2699_62	chr10	+	2542	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-42	1028	-8	-11	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTATTATTT	NA	False	NA	NA	False	AAAAAG	-45	NA	39245751	39440340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_26990_9	chr17	-	2148	15	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	35	junction_6	121.469929931449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569567	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26991_98	chr17	-	1943	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	45	-1	25	0	multi-exon	FALSE	canonical	3	144	junction_11	68.7455007804221	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569524	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26993_245	chr17	-	2088	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	14	0	2	0	multi-exon	FALSE	canonical	3	272	junction_6	38.0609912279546	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569567	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26994_7	chr17	-	1901	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	101.600738477491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569567	32540398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26995_5	chr17	-	3477	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	35	junction_5	130.49218054609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569555	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26996_6	chr17	-	3579	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	35	junction_5	126.05300847955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569555	32540397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26997_9	chr17	-	3520	13	FSM	ENSMUSG00000002625.11	ENSMUST00000236039.2	3513	13	-6	-1	-4	1	multi-exon	TRUE	canonical	3	272	junction_5	37.9549257526462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTTTGTGCTGTGGT	NA	False	NA	1	True	AATAAA	-18	NA	32569555	32540396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_26999_5	chr17	-	803	6	ISM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	10	14860	4	188	5prime_fragment	FALSE	canonical	3	144	junction_2	98.1366394370624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATAAGCTGACCTACCC	NA	False	NA	NA	False	NA	NA	NA	32569559	32555258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_270_446	SIRV3	-	590	3	FSM	SIRV3C	SIRV310	589	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1245	junction_2	66	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTTTTGGGTACTG	NA	False	NA	NA	False	NA	NA	NA	9914	8758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_-_8967_9189_9325_9667
Isoform_2700_14	chr10	+	3569	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-42	1	-8	-1	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAATTTTTGTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	39245751	39441367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27002_8	chr17	-	1603	4	FSM	ENSMUSG00000002625.11	ENSMUST00000235387.2	800	4	-4	-799	2	-654	multi-exon	FALSE	canonical	3	393	junction_2	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAGGAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32569567	32556100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32557489_32557764_32557798_32564297_32564373_32569460
Isoform_27003_122	chr17	-	3083	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	-3	7771	-3	-15	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAAAAAAACTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	33007264	32992240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
Isoform_27004_5	chr17	-	5077	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	34	5740	-3	2016	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	33007227	32990209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
Isoform_27005_11	chr17	-	2189	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	11	1336	11	394	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4495	False	NA	NA	False	NA	NA	NA	33028894	33015985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
Isoform_27006_5	chr17	-	4096	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	36	1880	3	-1874	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGTTGTATCTTTGA	NA	False	NA	-20	True	NA	NA	NA	33049199	33036302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
Isoform_27007_73	chr17	-	2516	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	37	2784	-15	1859	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110579	33100976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
Isoform_27009_3	chr17	-	3212	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	16	2109	16	-2100	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTTGCCTGCATCTG	NA	False	NA	NA	False	NA	NA	NA	33110600	33100301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
Isoform_2701_48	chr10	+	2578	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-4	954	-4	-4	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245789	39440414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27010_78	chr17	-	1730	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	22	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166354	33143661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
Isoform_27012_5	chr17	-	1818	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	129	junction_11	13.6369696835023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166354	33143661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151657_33160029_33160175_33165778_33165978_33166286
Isoform_27013_5	chr17	-	769	4	NIC	ENSMUSG00000024295.10	novel	897	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGATATTCATTGTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	33184672	33174970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33175278_33176622_33176849_33179548_33179752_33184639
Isoform_27014_31	chr17	-	3421	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-4	-10	-4	10	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTTTGTGTATGT	2755	False	NA	-6	True	NA	NA	NA	33252380	33235826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
Isoform_27016_8	chr17	-	3537	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	5	2	5	-2	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTTGTTGTGTTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	33474114	33458693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
Isoform_27019_5	chr17	-	2257	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	33	4349	23	682	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACCTGCCTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33577819	33552664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
Isoform_27020_3	chr17	-	3465	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	13	3161	3	1870	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTACTTGTTTTAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33577839	33551476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
Isoform_27021_4	chr17	-	2699	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	15	-55	-3	55	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTGCT	NA	False	NA	NA	False	NA	NA	NA	33613600	33599173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
Isoform_27022_6	chr17	-	2494	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	46	119	10	-119	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAATGTTTTCATGTAG	NA	False	NA	NA	False	AATAAA	-14	NA	33613569	33599347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
Isoform_27023_10	chr17	-	1310	3	FSM	ENSMUSG00000055240.18	ENSMUST00000174512.4	6095	3	-14	4799	4	272	multi-exon	FALSE	canonical	3	44	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAATAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	33613611	33604408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33605442_33605658_33605786_33613461
Isoform_27029_653	chr17	-	2336	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5767	False	NA	-7	True	AATAAA	-14	NA	33904366	33865211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_27030_74	chr17	-	2362	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5741	False	NA	-7	True	AATAAA	-14	NA	33904392	33865211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_27034_351	chr17	-	2453	15	NIC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGCCTTTTTTGT	5767	False	NA	-7	True	AATAAA	-14	NA	33904366	33865211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_27036_17	chr17	-	2520	15	NIC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-42	-1	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGCTTGCCTTTTTT	5698	False	NA	-9	True	AATAAA	-12	NA	33904435	33865213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_27037_17	chr17	-	2310	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	663.597631344877	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5756	False	NA	-8	True	AATAAA	-13	NA	33904377	33865212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
Isoform_2704_16	chr10	+	2607	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-8	963	-8	-4	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245751	39440414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27044_131	chr17	-	1391	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	7	0	-6	0	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2683	False	NA	-11	True	AATAAA	-33	NA	33937637	33910488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_27045_8	chr17	-	1436	5	FSM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	-22	4	-5	-4	multi-exon	FALSE	canonical	3	31	junction_1	109.184476918654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTATGTTTCTAAGCT	2684	False	NA	-15	True	AATAAA	-29	NA	33937636	33910492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_27046_16	chr17	-	1198	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-6	1374	-6	435	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAATAAATAAATTGA	2683	False	NA	NA	False	NA	NA	NA	33937637	33914564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
Isoform_27047_4	chr17	-	1717	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-22	-151	-22	151	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	-8	True	ACTAAA	-29	NA	33979302	33965572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
Isoform_27048_123	chr17	-	1794	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	200	4115	-24	151	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	-8	True	ACTAAA	-29	NA	33979304	33965572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_27050_35	chr17	-	1942	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	48	4119	2	147	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTACCACTCAGCTTCTG	NA	False	NA	-12	True	ACTAAA	-25	NA	33979456	33965576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_27053_20	chr17	-	2673	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	216	3220	-8	1046	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	33979288	33964677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_27055_6	chr17	-	2839	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	46	3224	0	1042	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	33979458	33964681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
Isoform_27060_3	chr17	-	1577	7	FSM	ENSMUSG00000002289.17	ENSMUST00000173869.8	1859	7	290	-8	290	8	multi-exon	FALSE	canonical	1	4	junction_5	47.4812828620102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	106	False	NA	-3	True	AATAAA	-16	NA	34000227	33993873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
Isoform_27061_104	chr17	-	1603	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	555	1150	268	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	9	True	NA	-3	True	AATAAA	-16	NA	34000249	33993873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
Isoform_27062_64	chr17	-	1903	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	255	1150	-32	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	-3	True	AATAAA	-16	NA	34000549	33993873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
Isoform_27063_103	chr17	-	1871	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	287	1150	0	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	-3	True	AATAAA	-16	NA	34000517	33993873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
Isoform_27067_2713	chr17	-	314	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	67	1	-1	-1	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTCTAGAAATTGGT	NA	False	NA	-26	True	AATAAA	-13	NA	34043469	34042024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
Isoform_27068_738	chr17	-	310	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	67	15	-1	-1	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTCTAGAAATTGGT	NA	False	NA	-26	True	AATAAA	-13	NA	34043469	34042024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
Isoform_2707_5	chr10	+	2451	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.424874303761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245751	39440414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27075_873	chr17	-	2288	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	61	8	-4	1	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTCTTGTTTGTTTT	9754	False	NA	-15	True	AATAAA	-18	NA	34109574	34094640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
Isoform_27076_24	chr17	-	2349	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	0	8	0	1	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTCTTGTTTGTTTT	9693	False	NA	-15	True	AATAAA	-18	NA	34109635	34094640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
Isoform_27081_5	chr17	-	847	2	FSM	ENSMUSG00000092564.3	ENSMUST00000172526.3	978	2	-9	140	-9	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTATATTCCCTTTTA	1245	False	NA	-7	True	AATAAA	-21	NA	34128161	34127157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34127561_34127717
Isoform_27082_429	chr17	-	690	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	18	99	0	-1	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACTTTACAGCCAGTC	NA	False	NA	-16	True	AATAAA	-16	NA	34159299	34157893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
Isoform_27084_24	chr17	-	559	5	FSM	ENSMUSG00000024309.16	ENSMUST00000174048.8	560	5	0	1	0	-1	multi-exon	FALSE	canonical	3	138	junction_4	444.939602642876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACTTTACAGCCAGTC	NA	False	NA	-16	True	AATAAA	-16	NA	34159299	34157893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159270
Isoform_2709_18	chr10	+	2614	14	NNC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2435872714507	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATCAGGACAGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	39245751	39440414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405434_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27093_12676	chr17	-	546	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	14	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	12676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
Isoform_27096_37	chr17	-	1554	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	6	10	0	-3	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGGTCACTATGCTG	NA	False	NA	-14	True	AATAAA	-22	NA	34219257	34215000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
Isoform_27097_3	chr17	-	1612	8	NIC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	35.178843363706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGTCACTATGC	NA	False	NA	-16	True	AATAAA	-20	NA	34219257	34215002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34219038_34219167
Isoform_27098_32	chr17	-	1584	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	63	-28	-1	-1	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTCACTATGCTGTG	NA	False	NA	-12	True	AATAAA	-24	NA	34219258	34214998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
Isoform_27099_5	chr17	-	1768	7	NIC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	37	junction_6	25.5907969568923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGGTCACTATGCTG	NA	False	NA	-14	True	AATAAA	-22	NA	34219257	34215000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
Isoform_2710_3	chr10	+	3543	14	NNC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2435872714507	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTGTTTATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	39245778	39441370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405434_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27100_9	chr17	-	1809	6	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	22	294	-6	-2	intron_retention	FALSE	canonical	3	63	junction_3	8.8090862182181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243632	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262
Isoform_27101_160	chr17	-	1715	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	25	294	-3	-2	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27102_3	chr17	-	2218	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	23	-207	-5	207	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	34243631	34239558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27103_4	chr17	-	2099	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	78	junction_2	4.12310562561766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262
Isoform_27104_15	chr17	-	2008	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	78	junction_2	4.01995024844836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27105_3	chr17	-	1324	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	33.0175710796539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243629	34240060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34240931_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27106_9	chr17	-	2058	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	63	junction_2	9.32523458149981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243633	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27107_3	chr17	-	2435	4	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	80	junction_2	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCAGTTCTCTGT	NA	False	NA	-3	True	NA	NA	NA	34243629	34240062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262
Isoform_27108_10	chr17	-	2347	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	80	junction_2	3.11247489949718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCAGTTCTCTGTGTG	NA	False	NA	0	True	NA	NA	NA	34243629	34240059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262_34243393_34243483
Isoform_27109_14	chr17	-	1230	7	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	139	junction_4	22.7406879598857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379
Isoform_2711_5	chr10	+	2545	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGATCAGGACAGGT	NA	False	NA	NA	False	AATAAA	-21	NA	39245751	39440413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27110_17	chr17	-	1130	8	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	114	junction_7	29.9400762067385	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
Isoform_27111_3	chr17	-	990	9	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	13	junction_8	57.8748650106417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246954
Isoform_27112_73	chr17	-	965	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247030	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_27113_9	chr17	-	1303	6	FSM	ENSMUSG00000073422.12	ENSMUST00000170644.8	1293	6	-10	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	17.6748408762286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCCGGTTCTTCTTGT	NA	False	NA	-4	True	AATAAA	-20	NA	34247030	34245009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379
Isoform_27114_3	chr17	-	1396	6	FSM	ENSMUSG00000073422.12	ENSMUST00000235579.2	745	6	-329	-322	0	0	multi-exon	FALSE	canonical	3	139	junction_3	24.5324275195098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247030	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379
Isoform_27115_3	chr17	-	1144	8	FSM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	-11	0	-5	0	multi-exon	FALSE	canonical	3	92	junction_7	39.6227104533936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247039	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
Isoform_27116_3	chr17	-	1599	4	NIC	ENSMUSG00000073422.12	novel	1133	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	162	junction_3	19.4422220952236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247043	34245006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176
Isoform_27118_10	chr17	-	2436	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	0	-3	0	-1	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTTGTCTTTATGT	NA	False	NA	-3	True	AATAAA	-25	NA	34250622	34247243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
Isoform_27121_270	chr17	-	2387	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-70	3	-8	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250664	34247245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
Isoform_27124_26	chr17	-	2749	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-432	3	-370	1	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34251026	34247245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
Isoform_27127_28	chr17	-	2102	8	FSM	ENSMUSG00000024327.17	ENSMUST00000169397.9	1550	8	-28	-524	-8	1	multi-exon	FALSE	canonical	3	49	junction_7	197.419371296905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250664	34247245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797_34250237_34250521
Isoform_27129_17	chr17	-	1661	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250662	34247245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
Isoform_2713_4	chr10	+	2459	13	FSM	ENSMUSG00000019843.15	ENSMUST00000126486.8	2495	13	-43	79	-4	-11	multi-exon	FALSE	canonical	1	4	junction_2	42.9213589667843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTATTATTT	NA	False	NA	NA	False	AAAAAG	-45	NA	39245755	39440340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
Isoform_27139_59	chr17	-	3733	13	ISM	ENSMUSG00000024335.21	ENSMUST00000154232.9	4520	14	1080	1	-842	-1	3prime_fragment	TRUE	canonical	3	88	junction_10	131.526586877162	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	9363	False	NA	-17	True	AATAAA	-15	NA	34338305	34331004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
Isoform_2714_5	chr10	+	1852	2	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	300	27719	300	-18170	5prime_fragment	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAATGACAC	NA	False	NA	NA	False	ATTAAA	-12	NA	39489229	39503584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_39489343_39501845
Isoform_27143_449	chr17	-	3641	12	ISM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	2416	8	-842	-1	3prime_fragment	FALSE	canonical	3	318	junction_10	50.8649158990899	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	9363	False	NA	-17	True	AATAAA	-15	NA	34338305	34331004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
Isoform_27148_20	chr17	-	4410	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	239	8	239	-1	multi-exon	FALSE	canonical	3	100	junction_12	100.678634774216	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	6333	False	NA	-17	True	AATAAA	-15	NA	34341335	34331004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
Isoform_27149_18	chr17	-	4671	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	-22	8	-3	-1	multi-exon	FALSE	canonical	3	100	junction_12	100.678634774216	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGAGTTAGTTTTCTT	6072	False	NA	-17	True	AATAAA	-15	NA	34341596	34331004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
Isoform_2715_8	chr10	+	1966	3	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	323	19707	323	-10158	5prime_fragment	FALSE	canonical	3	53	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	39489252	39511596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_39489343_39501845_39502656_39510530
Isoform_2716_151	chr10	+	2075	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	309	483	309	1	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39489238	39530820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_2717_3	chr10	+	3979	8	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	309	-2	intron_retention	FALSE	canonical	3	53	junction_2	7.89212989539036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGTGTTTATCTCA	NA	False	NA	1	True	AATAAA	-14	NA	39489238	39530817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_27170_12	chr17	-	867	6	FSM	ENSMUSG00000096727.4	ENSMUST00000174576.4	1352	6	425	60	-1	-6	multi-exon	FALSE	canonical	2	4	junction_1	3.70944739819828	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATCATTA	NA	False	NA	NA	False	NA	NA	NA	34406313	34401020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403388_34404703_34404772_34406223
Isoform_27171_4	chr17	-	1121	5	FSM	ENSMUSG00000036594.16	ENSMUST00000040655.14	1128	5	0	7	0	-7	multi-exon	FALSE	canonical	2	6	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGTTTGGTTTGGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34506797	34501724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34501998_34502128_34502304_34502548_34502831_34503261_34503511_34506655
Isoform_27172_231	chr17	-	1134	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	101	3	72	-3	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTCTCCCCAGTCTCT	896	False	NA	-26	True	NA	NA	NA	34822563	34820067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_27174_30	chr17	-	1260	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	-27	5	-27	-5	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGTCTCCCCAGTCT	768	False	NA	-28	True	NA	NA	NA	34822691	34820069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
Isoform_27176_4	chr17	-	1079	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	71	-4	intron_retention	FALSE	canonical	3	17	junction_2	458.87927333886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGTCTCCCCAGTCTC	895	False	NA	-27	True	NA	NA	NA	34822564	34820068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34820641_34820714_34820833_34821058_34821172_34821264_34821284_34822307
Isoform_27178_3	chr17	-	1147	5	NNC	ENSMUSG00000015474.17	novel	772	7	NA	NA	3589	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	26.7254560297855	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	8026	False	NA	-4	True	AATAAA	-13	NA	34842313	34835639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34842212
Isoform_27179_7	chr17	-	1781	8	FSM	ENSMUSG00000015474.17	ENSMUST00000171376.8	1750	8	-30	-1	-28	0	multi-exon	FALSE	canonical	3	52	junction_2	8.14160391358572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	4187	False	NA	-1	True	AATAAA	-16	NA	34846152	34835636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778
Isoform_27180_20	chr17	-	1717	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-11	4	-11	-2	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	3919	False	NA	-4	True	AATAAA	-13	NA	34846420	34835639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
Isoform_27181_5	chr17	-	1827	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-118	1	-28	0	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3812	False	NA	-1	True	AATAAA	-16	NA	34846527	34835636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
Isoform_27182_8	chr17	-	1681	9	FSM	ENSMUSG00000015474.17	ENSMUST00000166040.9	1139	9	23	-565	23	0	multi-exon	FALSE	canonical	3	10	junction_8	20.3312413541328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	3349	False	NA	-2	True	AATAAA	-15	NA	34846990	34835637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846906
Isoform_27183_6	chr17	-	1716	9	NIC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-195	0	combination_of_known_junctions	TRUE	canonical	2	13	junction_8	19.4148783153539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTTGGCTTATTCCCA	9878	False	NA	0	True	AATAAA	-17	NA	34847208	34835635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34847091
Isoform_27184_152	chr17	-	1082	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	38	0	20	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5611	False	NA	-4	True	AATAAA	-16	NA	35055883	35042968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_27185_7	chr17	-	1300	6	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	82	junction_5	4.14728827066554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5582	False	NA	-4	True	AATAAA	-16	NA	35055912	35042968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_27186_11	chr17	-	1140	4	FSM	ENSMUSG00000061207.12	ENSMUST00000160993.2	768	4	20	-392	20	392	multi-exon	FALSE	canonical	3	82	junction_3	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAGGAAAAAAAA	5611	False	NA	NA	False	NA	NA	NA	35055883	35050352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35051129_35051421_35051518_35055405_35055543_35055752
Isoform_27188_124	chr17	-	3932	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	12	7	0	-2	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGTGCTTGGAGTAT	5317	False	NA	-30	True	AATAAA	-6	NA	35069174	35058226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
Isoform_27190_16	chr17	-	2589	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	50	2	-24	-1	multi-exon	TRUE	canonical	1	4	junction_13	3.65842630716852	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCTGTCTTATGTC	NA	False	NA	-2	True	AATAAA	-16	NA	35101026	35081582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
Isoform_27191_3	chr17	-	2007	2	FSM	ENSMUSG00000092687.3_ENSMUSG00000092203.8	ENSMUST00000174464.2	785	2	-1224	2	0	1	multi-exon	FALSE	canonical	3	190	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	6010	False	NA	NA	False	AATAAA	-17	NA	35171444	35169215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35169452_35169673
Isoform_27192_3	chr17	-	970	3	FSM	ENSMUSG00000092203.8	ENSMUST00000174039.8	934	3	-34	-2	0	1	multi-exon	FALSE	canonical	3	110	junction_2	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	6010	False	NA	NA	False	AATAAA	-17	NA	35171444	35169215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35169452_35169673_35169824_35170860
Isoform_27193_69	chr17	-	575	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	4	0	-4	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
Isoform_27194_5	chr17	-	534	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	-20	6	0	-4	multi-exon	FALSE	canonical	3	5	junction_2	75.5439533575579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
Isoform_27195_10	chr17	-	426	4	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.0022221728417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35169452_35170859_35170902_35171111_35171150_35171327
Isoform_27196_3	chr17	-	585	4	FSM	ENSMUSG00000036185.10	ENSMUST00000173211.8	618	4	16	17	16	1	multi-exon	FALSE	canonical	3	47	junction_3	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	35246619	35244951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419
Isoform_27197_3	chr17	-	644	5	NIC	ENSMUSG00000036185.10	novel	665	5	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	14.8218588577816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	35246892	35244953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246561_35246772
Isoform_27198_7	chr17	-	2703	25	FSM	ENSMUSG00000007035.16	ENSMUST00000097338.11	2678	25	-26	1	-7	-1	multi-exon	FALSE	canonical	1	1	junction_5	4.38728434101198	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTTCCTTAGGTCACC	1763	False	NA	NA	False	AATAAA	-16	NA	35265728	35247581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35247829_35248171_35248246_35248628_35248767_35248853_35248998_35249176_35249252_35249584_35249735_35250123_35250251_35250329_35250520_35250654_35250743_35251316_35251398_35251735_35251846_35252198_35252272_35252565_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206_35265364_35265675
Isoform_27199_4	chr17	-	632	3	FSM	ENSMUSG00000073413.10	ENSMUST00000007259.4	546	3	7	-93	7	93	multi-exon	FALSE	canonical	2	3	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGAAATGTTCGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	35293469	35290325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35290736_35293150_35293289_35293385
Isoform_272_662	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_-_8976_9189_9299_9434
Isoform_2720_3	chr10	+	3551	13	ISM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	-2	52511	-2	-20123	5prime_fragment	FALSE	canonical	3	30	junction_10	6.11464544261471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGTGAAAATATTAAAAG	NA	False	NA	NA	False	CATAAA	-37	NA	39608111	39698696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101
Isoform_27200_145	chr17	-	944	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	17	0	17	0	multi-exon	FALSE	canonical	3	826	junction_1	47.9780042195264	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340245	35335173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
Isoform_27201_241	chr17	-	912	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	49	0	49	0	multi-exon	TRUE	canonical	3	826	junction_1	47.9780042195264	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340213	35335173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
Isoform_27203_5	chr17	-	899	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	113	1	113	-1	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGGGTTTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	35350913	35347973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
Isoform_27204_10	chr17	-	2852	16	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2620	-2	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	94.6922500642065	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGGGGGG	5411	False	NA	-15	True	AATAAA	-7	NA	35374855	35368065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_27205_4	chr17	-	2968	16	NIC	ENSMUSG00000024393.15	novel	6741	29	NA	NA	-2734	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	94.6922500642065	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGGGGGAA	5297	False	NA	-13	True	AATAAA	-9	NA	35374969	35368063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_27207_4	chr17	-	3123	16	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	8750	14	-2888	-2	3prime_fragment	FALSE	canonical	3	318	junction_15	67.144090498635	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGGGGGG	5143	False	NA	-15	True	AATAAA	-7	NA	35375123	35368065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_27209_8	chr17	-	2714	16	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	9162	11	-2476	1	3prime_fragment	FALSE	canonical	3	318	junction_15	67.144090498635	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGGGAAA	5555	False	NA	-12	True	AATAAA	-10	NA	35374711	35368062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_27210_4	chr17	-	2858	16	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	9018	11	-2620	1	3prime_fragment	FALSE	canonical	3	318	junction_15	67.144090498635	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGGGAAA	5411	False	NA	-12	True	AATAAA	-10	NA	35374855	35368062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
Isoform_27213_3	chr17	-	5263	20	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	5585	14	3657	-2	3prime_fragment	FALSE	canonical	3	190	junction_19	109.232198230164	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGGGGGG	1978	False	NA	-15	True	AATAAA	-7	NA	35378288	35368065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911
Isoform_27214_5	chr17	-	1773	12	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	23	10052	23	-1995	5prime_fragment	FALSE	canonical	3	176	junction_1	19.8648324998711	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTCCTGCAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	35383850	35378103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
Isoform_27215_8	chr17	-	1465	4	NNC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	-728	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	32.4995726467629	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35455496	35439150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35439953_35440112_35440335_35453927_35454208_35455335
Isoform_27216_51	chr17	-	1440	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	7	0	7	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35454761	35439150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
Isoform_27217_21	chr17	-	1481	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	-34	0	-34	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35454802	35439150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
Isoform_27218_4	chr17	-	2844	2	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-43	1	-43	-1	intron_retention	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCGTTGAATCTAAGTC	9290	False	NA	-6	True	AATAAA	-19	NA	35827764	35823631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35824082_35825370
Isoform_27219_9	chr17	-	1943	3	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	0	2	0	1	intron_retention	FALSE	canonical	3	75	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9333	False	NA	-7	True	AATAAA	-18	NA	35827721	35823632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35824082_35825370_35825918_35826774
Isoform_27220_16	chr17	-	1654	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	11	0	7	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9344	False	NA	-5	True	AATAAA	-20	NA	35827710	35823630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
Isoform_27221_32	chr17	-	1604	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9344	False	NA	-7	True	AATAAA	-18	NA	35827710	35823632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
Isoform_27224_206	chr17	-	3668	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	2	755	2	1	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGCAAGTGTGAGCCTT	1763	False	NA	-7	True	GATAAA	-14	NA	35978482	35967280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
Isoform_27225_29	chr17	-	4402	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	17	6	17	-6	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACATGGGGTCTCGTG	1778	False	NA	NA	False	AATAAA	-31	NA	35978467	35966531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
Isoform_27228_4	chr17	-	1686	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	51.1109710428861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984606	35978630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984406
Isoform_27229_3	chr17	-	1676	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_13	48.8663192778351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTACGCGGCTTCA	NA	False	NA	-9	True	AATAAA	-9	NA	35984606	35978629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984417
Isoform_2723_5	chr10	+	2498	5	FSM	ENSMUSG00000063428.9	ENSMUST00000019977.8	3000	5	-1	503	-1	-503	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCTTACGATTGGCC	NA	False	NA	NA	False	AATAAA	-18	NA	40506005	40525424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523469
Isoform_27230_144	chr17	-	1646	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	25	8	-11	0	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTACGCGGCTTCA	NA	False	NA	-9	True	AATAAA	-9	NA	35984606	35978629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
Isoform_27233_41	chr17	-	2498	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	9.22821759604746	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999853
Isoform_27234_14	chr17	-	2490	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	10.9949988631195	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999861
Isoform_27236_8	chr17	-	3087	12	ISM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	10206	13	7567	-10	3prime_fragment	FALSE	canonical	3	13	junction_10	9.54502163520486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCCACAGCTGTGG	5343	False	NA	-12	True	AATAAA	-22	NA	36001296	35992471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885
Isoform_27237_5	chr17	-	3729	18	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	157	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	11.600620434428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6888	False	NA	1	True	AATAAA	-35	NA	36008706	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36008566
Isoform_27238_4	chr17	-	3794	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	-38	13	-38	-10	multi-exon	FALSE	canonical	3	11	junction_16	10.4162502800285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCCACAGCTGTGG	9009	False	NA	-12	True	AATAAA	-22	NA	36011540	35992471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
Isoform_27239_3	chr17	-	3597	18	FSM	ENSMUSG00000003534.18	ENSMUST00000166980.9	3627	18	14	16	14	-16	multi-exon	TRUE	canonical	0	0	junction_17	11.600620434428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGTTTTTCCACAG	7627	False	NA	-18	True	AATAAA	-16	NA	36012922	35992477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
Isoform_2724_40	chr10	+	2717	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	0	2	0	-1	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	16	True	AATAAA	-18	NA	40759822	40814564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
Isoform_27240_3	chr17	-	2592	10	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8955	0	intron_retention	FALSE	canonical	3	15	junction_9	9.7271416125508	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6731	False	NA	1	True	AATAAA	-35	NA	35999908	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999762_35999853
Isoform_27241_19	chr17	-	2387	10	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	10.60863845536	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	6730	False	NA	1	True	AATAAA	-35	NA	35999909	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_35999853
Isoform_27242_7	chr17	-	2373	10	NNC	ENSMUSG00000003534.18	novel	2633	16	NA	NA	8954	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	12.3418389089439	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGCTGTGGGTGTATT	6730	False	NA	-5	True	AATAAA	-29	NA	35999909	35992464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_35999861
Isoform_27243_6	chr17	-	2984	11	ISM	ENSMUSG00000003534.18	ENSMUST00000155957.8	2633	16	10153	-864	7572	0	3prime_fragment	FALSE	canonical	3	12	junction_6	10.7893465974544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	5348	False	NA	1	True	AATAAA	-35	NA	36001291	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885
Isoform_27244_6	chr17	-	3666	17	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	11.1186779789685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	9039	False	NA	1	True	AATAAA	-35	NA	36011510	35992458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
Isoform_27245_3	chr17	-	2448	9	NNC	ENSMUSG00000003534.18	novel	2633	16	NA	NA	8975	-10	intron_retention	FALSE	canonical	3	12	junction_6	11.2520831404678	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCCACAGCTGTGG	6751	False	NA	-12	True	AATAAA	-22	NA	35999888	35992471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999762_35999853
Isoform_27254_1518	chr17	-	2571	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	4	-15	-4	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTGAGGCTGTGT	NA	False	NA	-11	True	AATAAA	-12	NA	36149124	36144816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_27256_5878	chr17	-	1688	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	887	-15	797	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	5878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTCTCCTTTCTCTTTC	NA	False	NA	-35	True	NA	NA	NA	36149124	36145699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_27257_865	chr17	-	1738	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	26	885	26	799	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTTTCTCTTTCCA	NA	False	NA	-33	True	NA	NA	NA	36149172	36145697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
Isoform_2726_15	chr10	+	2510	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-35	1	17	-1	multi-exon	FALSE	canonical	3	104	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTTAGACTCTTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	41326395	41329463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41326527_41327084
Isoform_27272_15	chr17	-	2099	5	FSM	ENSMUSG00000050705.16	ENSMUST00000146451.8	2081	5	-10	-8	-1	-2	multi-exon	FALSE	canonical	3	307	junction_3	46.1756158594555	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36208013	36203570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562
Isoform_27273_42	chr17	-	1172	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	18	3	1	-3	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36207994	36203571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
Isoform_27274_10	chr17	-	1133	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36208019	36203570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
Isoform_27275_49	chr17	-	1209	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	81	3	-38	-3	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36208242	36203571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
Isoform_27277_25	chr17	-	1310	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	-20	3	-20	-3	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36208343	36203571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
Isoform_27278_4	chr17	-	2161	4	NIC	ENSMUSG00000050705.16	novel	2081	5	NA	NA	4	1	intron_retention	FALSE	canonical	3	307	junction_2	50.4799189997589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTTCACGTCACTTT	NA	False	NA	-2	True	AATAAA	-20	NA	36207999	36203567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36204002_36205810_36206012_36206175_36206265_36206562
Isoform_27279_33	chr17	-	1408	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	30	14	0	0	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220937	36208500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_27280_20	chr17	-	1363	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	-13	-10	-2	-4	multi-exon	TRUE	canonical	3	28	junction_5	34.4359508470988	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTGTCATTATT	NA	False	NA	-2	True	AATAAA	-34	NA	36220951	36208490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_27281_14	chr17	-	1375	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	12	1	0	-1	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCTACCGACAAAAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	36220937	36208504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_27282_3	chr17	-	1343	11	NIC	ENSMUSG00000024426.18	novel	1388	12	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	44.8905335232274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTGTCATTATT	NA	False	NA	-2	True	AATAAA	-34	NA	36220960	36208490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_27283_3	chr17	-	1368	12	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	38.0604130471848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTACCGACAAAAAGTGA	NA	False	NA	-14	True	AATAAA	-22	NA	36220942	36208502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36208808_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
Isoform_27287_55	chr17	-	1094	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4281	False	NA	-6	True	AATAAA	-21	NA	36227296	36221270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_27288_845	chr17	-	1062	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	16	1	4	-1	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4312	False	NA	-7	True	AATAAA	-20	NA	36227265	36221271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_27290_12	chr17	-	1024	6	FSM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-63	-473	-11	1	multi-exon	FALSE	canonical	3	24	junction_2	528.957313967772	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTCCCTTTGGGCTGTC	4285	False	NA	-5	True	AATAAA	-22	NA	36227292	36221269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587_36225697_36227183
Isoform_27296_156	chr17	-	3151	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10	0	10	0	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280643	36267710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
Isoform_27298_17	chr17	-	3244	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGTGCCTGTGGGGTG	NA	False	NA	-14	True	AATAAA	-16	NA	36280654	36267712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
Isoform_27305_43	chr17	-	1932	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36289917	36283432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
Isoform_27306_11	chr17	-	2079	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	8	-1	intron_retention	FALSE	canonical	3	88	junction_4	22.0056810846654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCTCTCATTTCTCT	NA	False	NA	-2	True	AATAAA	-15	NA	36290410	36283433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
Isoform_27307_39	chr17	-	1829	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	22.0056810846654	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290159	36283432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
Isoform_27308_30	chr17	-	2352	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCTCTCATTTCTCT	NA	False	NA	-2	True	AATAAA	-15	NA	36291135	36283433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
Isoform_27310_34	chr17	-	2149	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	199	2	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTCATTTCTCTGTT	NA	False	NA	1	True	AATAAA	-18	NA	36290929	36283430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
Isoform_27311_4	chr17	-	2026	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	703	-2	-7	2	multi-exon	FALSE	canonical	3	22	junction_3	38.4216374224502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTCATTTCTCTGTT	NA	False	NA	1	True	AATAAA	-18	NA	36290425	36283430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
Isoform_27316_36	chr17	-	1207	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-25	-77	-25	3	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395140	36391003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
Isoform_27318_155	chr17	-	1238	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-25	-75	-25	1	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	-4	True	AATAAA	-23	NA	36395140	36391005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
Isoform_27319_18	chr17	-	1285	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-70	-77	-70	3	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395185	36391003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
Isoform_2732_46	chr10	+	2850	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	0	-6	0	6	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	10	True	AATAAA	-22	NA	41326378	41341576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
Isoform_27321_55	chr17	-	932	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-26	-77	-26	3	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395141	36391003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
Isoform_27322_6	chr17	-	938	5	FSM	ENSMUSG00000073406.11	ENSMUST00000185167.8	836	5	-25	-77	-25	3	multi-exon	FALSE	canonical	3	9	junction_4	210.516626421763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTTTCCTGCATTGA	NA	False	NA	-2	True	AATAAA	-25	NA	36395140	36391003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394832_36395051
Isoform_27323_203	chr17	-	963	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-25	-76	-25	2	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395140	36391004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
Isoform_27326_9	chr17	-	3140	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-25	1	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTCCTGCATT	NA	False	NA	-4	True	AATAAA	-23	NA	36395140	36391005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
Isoform_27327_9	chr17	-	660	3	ISM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	0	0	0	0	intron_retention	FALSE	canonical	3	770	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_36566691_36566835_36566962_36568333
Isoform_27328_14	chr17	-	601	4	FSM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	-22	0	-9	0	multi-exon	FALSE	canonical	3	621	junction_3	70.7153920067383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568757	36566558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497
Isoform_27329_200	chr17	-	503	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	226	0	0	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
Isoform_2733_3	chr10	+	3555	6	NIC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	-6	-70	intron_retention	FALSE	canonical	3	58	junction_5	15.7530949340122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAATCTCCAAAG	NA	False	NA	-66	True	ATTAAA	-5	NA	41326372	41341500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41332612_41338274_41338357_41340272
Isoform_27330_118	chr17	-	520	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	204	5	-9	1	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTCTGTGGTATCT	NA	False	NA	-21	True	AATAAA	-15	NA	36568757	36566563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
Isoform_27331_19	chr17	-	398	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	13	26	0	2	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTGTGGTATCTC	NA	False	NA	-20	True	AATAAA	-16	NA	36568735	36566562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
Isoform_27332_9	chr17	-	580	4	NIC	ENSMUSG00000024446.14	novel	729	5	NA	NA	0	2	intron_retention	FALSE	canonical	3	710	junction_3	28.7672653471886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTGTGGTATCTC	NA	False	NA	-20	True	AATAAA	-16	NA	36568735	36566562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36566691_36566835_36566962_36568333_36568599_36568674
Isoform_27333_38	chr17	-	3048	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	157	-1	-27	1	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	-7	True	NA	NA	NA	36582302	36569763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_27336_6	chr17	-	3080	7	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-38	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	19.4028921097403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTCTTGAGTTGCGTGG	NA	False	NA	-10	True	NA	NA	NA	36582313	36569766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_27337_3	chr17	-	1485	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-19	-1	-19	1	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATTGTGTTTGTCATC	NA	False	NA	1	True	ATTAAA	-21	NA	36582294	36573495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_27338_3	chr17	-	1980	4	ISM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	155	3737	-29	-3	5prime_fragment	FALSE	canonical	3	58	junction_1	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGAGATTCATTGTGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	36582304	36573501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_36574852_36578016_36578113_36579500_36579959_36582228
Isoform_27339_12	chr17	-	1570	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	32	-3	32	3	multi-exon	FALSE	canonical	3	708	junction_2	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTTAAATACAGGCCCA	NA	False	NA	NA	False	AATAAA	-18	NA	37262573	37259244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37260447_37260768_37260878_37262314
Isoform_2734_9	chr10	+	3606	24	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	46.8391044035137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9115	False	NA	25	True	AATAAA	-14	NA	41352331	41363022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_27340_91	chr17	-	626	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	39	934	39	0	multi-exon	FALSE	canonical	3	708	junction_2	5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262566	37260181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37260447_37260768_37260878_37262314
Isoform_27342_35	chr17	-	732	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	17	-7	17	7	multi-exon	FALSE	canonical	3	586	junction_1	61.9157133170212	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGTGTGTTACTCTTA	NA	False	NA	-4	True	ACTAAA	-24	NA	37269357	37265240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
Isoform_27346_689	chr17	-	640	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	68	2	17	-2	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTTGATGTTATGTG	NA	False	NA	-15	True	ACTAAA	-13	NA	37269357	37265251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
Isoform_27347_55	chr17	-	724	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	-13	-1	-13	1	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGATGTTATGTGTGT	NA	False	NA	-12	True	ACTAAA	-16	NA	37269438	37265248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
Isoform_27348_4	chr17	-	858	4	FSM	ENSMUSG00000064308.11	ENSMUST00000039846.12	865	4	0	7	0	-7	multi-exon	FALSE	canonical	3	6	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCCATATAAAATTTTG	NA	False	NA	-27	True	ATTAAA	-22	NA	37292129	37288599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37288999_37289360_37289439_37289542_37289826_37292031
Isoform_27350_29	chr17	-	1969	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	763	-273	271	273	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGTTAAGTGAGACT	NA	False	NA	-10	True	NA	NA	NA	37299666	37294679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
Isoform_27355_3	chr17	-	1726	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	734	-1	242	1	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGTTTTTAATACGG	NA	False	NA	NA	False	CATAAA	-15	NA	37299695	37294951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
Isoform_27358_15	chr17	-	1438	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	496	8	496	-8	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTTCTGATGTGTGA	NA	False	NA	-9	True	AATAAA	-19	NA	41245442	41233949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
Isoform_27359_16	chr17	-	1370	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	564	8	564	-8	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTTCTGATGTGTGA	NA	False	NA	-9	True	AATAAA	-19	NA	41245374	41233949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
Isoform_27360_21	chr17	-	2512	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-255	3107	21	-1180	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTATTGAAACTTGT	NA	False	NA	-12	True	TATAAA	-22	NA	43187535	43106948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_27361_3	chr17	-	5630	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-266	0	10	0	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187546	43103841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_27368_6	chr17	-	2494	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-4	-1187	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATAGTTTTTTTATTGA	NA	False	NA	-19	True	TATAAA	-15	NA	43187560	43106955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
Isoform_2737_286	chr10	+	3540	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	22	1	0	-1	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9115	False	NA	28	True	AATAAA	-17	NA	41352331	41363025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_27375_10	chr17	-	1835	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	-30	2755	-30	-2747	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	44416730	44409953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
Isoform_27376_4	chr17	-	1901	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-203	2747	-158	-2747	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	44416858	44409953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
Isoform_27377_8	chr17	-	1747	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-49	2747	-4	-2747	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	44416704	44409953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
Isoform_27379_69	chr17	-	2937	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	83	7	83	-7	multi-exon	FALSE	canonical	3	561	junction_9	75.0022221893014	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGAGTGTAGCCTTTT	2267	False	NA	-9	True	AATAAA	-13	NA	45744580	45702816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
Isoform_27380_414	chr17	-	2841	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	187	-1	-9	1	multi-exon	TRUE	canonical	3	561	junction_9	75.0022221893014	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGCCTTTTGTTTGAAG	2371	False	NA	-1	True	AATAAA	-21	NA	45744476	45702808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
Isoform_2739_25	chr10	+	3395	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	52.4446973581861	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9121	False	NA	28	True	AATAAA	-17	NA	41352337	41363025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_274_353	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_6	907.203057620014	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
Isoform_2741_77	chr10	+	3332	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTTATGCTCTGTGC	9115	False	NA	28	True	AATAAA	-17	NA	41352331	41363025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
Isoform_27421_23519	chr17	-	2516	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	5	-1	5	1	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	23519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTCTCCTTGTAACA	NA	False	NA	-23	True	AATAAA	-20	NA	45884192	45878699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
Isoform_27422_396	chr17	-	2557	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	-40	3	-40	-3	multi-exon	FALSE	canonical	3	9221	junction_4	988.252604347694	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCCTGCTCTCCTTGT	NA	False	NA	-27	True	AATAAA	-16	NA	45884237	45878703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
Isoform_2746_577	chr10	+	2871	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	45	6	-42	-6	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41395454	41407038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
Isoform_27462_973	chr17	-	2098	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906496	45896125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_27469_113	chr17	-	1990	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	2	4	0	-4	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906496	45896132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
Isoform_27476_53	chr17	-	2189	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1063	junction_5	409.470050458177	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906456	45896126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_27482_634	chr17	-	2090	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906496	45896127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_27483_1406	chr17	-	2041	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906452	45896132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_27489_116	chr17	-	1967	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	24	-3	-3	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906472	45896125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
Isoform_27497_58	chr17	-	2182	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906456	45896127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
Isoform_27504_79	chr17	-	836	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	63	-283	63	0	multi-exon	FALSE	canonical	3	164	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912829	45911896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45912612_45912708
Isoform_27505_27	chr17	-	899	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	0	-283	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912892	45911896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45912612_45912708
Isoform_27506_42	chr17	-	770	2	FSM	ENSMUSG00000079471.5	ENSMUST00000208801.2	437	2	49	-382	45	0	multi-exon	FALSE	canonical	3	33	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912847	45911896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45912612_45912792
Isoform_27507_3	chr17	-	2069	18	ISM	ENSMUSG00000058626.17	ENSMUST00000120717.8	2591	22	16361	3	16333	-3	3prime_fragment	FALSE	canonical	0	0	junction_6	2.25072076114223	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCCCACTTAATTCT	NA	False	NA	NA	False	AATAAA	-11	NA	45953890	45941132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_45941538_45941651_45941711_45942713_45942828_45942934_45943014_45943306_45943376_45943624_45943690_45943800_45943859_45943965_45944032_45944294_45944335_45944697_45944910_45945193_45945206_45949620_45949797_45949994_45950159_45950335_45950411_45950548_45950635_45950728_45950813_45953393_45953563_45953754
Isoform_27508_3	chr17	-	2364	15	NIC	ENSMUSG00000058626.17	novel	2591	22	NA	NA	16268	-1174	intron_retention	FALSE	canonical	0	0	junction_4	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	45953955	45942303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45942828_45942934_45943014_45943306_45943376_45943624_45943690_45943800_45943859_45943965_45944032_45944294_45944335_45944697_45945206_45949620_45949797_45949994_45950159_45950335_45950411_45950548_45950635_45950728_45950813_45953393_45953563_45953754
Isoform_27513_69	chr17	-	3182	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	97	5	-25	-5	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997088	45971101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
Isoform_27514_47	chr17	-	3255	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	25	4	25	-4	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCTGGTTGGCAGTC	NA	False	NA	-10	True	AATAAA	-16	NA	45997160	45971100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
Isoform_27516_36	chr17	-	3245	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	6	6	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTCCCTCCCTGGA	NA	False	NA	0	True	AATAAA	-26	NA	45997179	45971090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
Isoform_27517_36	chr17	-	3154	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-36	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997099	45971101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
Isoform_27521_6	chr17	-	2127	3	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	25	1472	intron_retention	FALSE	canonical	3	163	junction_2	28	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	45997160	45988416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45990243_45990457_45990641_45997042
Isoform_27522_13	chr17	-	1432	5	ISM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-5	5527	-5	1126	5prime_fragment	FALSE	canonical	3	442	junction_4	45.7130998730123	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAAGTGGCCACGTG	NA	False	NA	NA	False	AAGAAA	-16	NA	46343300	46334995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_27523_11	chr17	-	2258	4	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-5	1126	intron_retention	FALSE	canonical	3	442	junction_3	52.6687763290548	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAAGTGGCCACGTG	NA	False	NA	NA	False	AAGAAA	-16	NA	46343300	46334995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46335021_46335369_46336470_46339276_46339326_46342216
Isoform_27524_31	chr17	-	1407	4	ISM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-5	5901	-5	752	5prime_fragment	FALSE	canonical	3	442	junction_3	52.7530936428271	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCCAGAGCTTCACAC	NA	False	NA	NA	False	NA	NA	NA	46343300	46335369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_46335447_46336272_46336470_46339276_46339326_46342216
Isoform_27526_3	chr17	-	919	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	43	4	43	-4	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTCTGTCTTGATTG	NA	False	NA	NA	False	CATAAA	-17	NA	46455099	46440200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
Isoform_27527_78	chr17	-	1245	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	26	1	26	-1	multi-exon	FALSE	canonical	3	95	junction_1	3.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTGATTTAGACTTT	NA	False	NA	-3	True	AATAAA	-20	NA	46464453	46458313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46459211_46463704_46463968_46464368
Isoform_27529_3	chr17	-	3239	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	-1	0	-1	0	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7122	False	NA	-12	True	AATAAA	-15	NA	46513572	46482280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
Isoform_2753_28	chr10	+	3548	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	261	0	261	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	253	False	NA	8	True	AATAAA	-15	NA	41686191	41784420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_27530_399	chr17	-	1240	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	68	6	-18	-6	multi-exon	TRUE	canonical	3	702	junction_8	54.719597723302	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGCTTTTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	46558912	46554851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
Isoform_27531_17	chr17	-	1266	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	36	12	36	-12	multi-exon	FALSE	canonical	3	702	junction_8	54.719597723302	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTTTCAGGCTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	46558944	46554857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
Isoform_27536_13	chr17	-	2578	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	128.047189132086	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5829	False	NA	-31	True	AATAAA	-17	NA	46593929	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_27538_23	chr17	-	2640	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	5828	False	NA	-34	True	AATAAA	-14	NA	46593930	46568803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_27539_50	chr17	-	2508	11	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
Isoform_27541_78	chr17	-	2541	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	97.6076328982524	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_27542_58	chr17	-	2411	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	11	4	0	-1	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
Isoform_27543_15	chr17	-	2667	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	119.555098124686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCCCCTTTTTGCTTT	5833	False	NA	-5	True	AATAAA	-43	NA	46593925	46568774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_27544_20	chr17	-	2516	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	125.623246256415	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5828	False	NA	-31	True	AATAAA	-17	NA	46593930	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
Isoform_27546_112	chr17	-	2569	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	14	-24	0	1	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATCCCCTTTTTGCTT	5833	False	NA	-6	True	AATAAA	-42	NA	46593925	46568775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
Isoform_27547_105	chr17	-	2414	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	0	-2	0	-1	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5833	False	NA	-31	True	AATAAA	-17	NA	46593925	46568800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_2755_7	chr10	+	3745	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	62	2	62	-2	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTTTATTAATTTC	54	False	NA	6	True	AATAAA	-13	NA	41685992	41784418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_27551_6	chr17	-	3341	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	131	junction_6	96.4461475384061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGCTTAATTTCTTTC	5835	False	NA	-35	True	AATAAA	-13	NA	46593923	46568804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
Isoform_27557_21	chr17	-	4828	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	27	11	1	1	multi-exon	TRUE	canonical	3	24	junction_18	9.45832966226067	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTGTGTTTTAAAAAAA	7139	False	NA	-5	True	GATAAA	-13	NA	46638922	46614157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
Isoform_27558_3	chr17	-	2286	2	FSM	ENSMUSG00000032842.14	ENSMUST00000165733.2	2283	2	0	-3	0	3	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCTTCAACTTGCAAT	7138	False	NA	NA	False	TATAAA	-22	NA	46638923	46633780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46635841_46638697
Isoform_27559_8	chr17	-	675	3	ISM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	3863	-171	3863	-59	3prime_fragment	FALSE	canonical	3	32	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGGGAAGTCATTGA	7508	False	NA	NA	False	AATAAA	-31	NA	46744692	46743167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_46743444_46743872_46744080_46744500
Isoform_2756_24	chr10	+	2599	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	1	0	1	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	8	True	AATAAA	-15	NA	41763435	41784420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
Isoform_27560_3	chr17	-	1938	10	FSM	ENSMUSG00000067144.8	ENSMUST00000087012.7	1989	10	-8	59	-8	-59	multi-exon	FALSE	canonical	3	9	junction_9	10.8297714942322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGGGAAGTCATTGA	2809	False	NA	NA	False	AATAAA	-31	NA	46749391	46743167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748922
Isoform_27561_27	chr17	-	2646	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-35	5	-35	-5	multi-exon	FALSE	canonical	3	76	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTAACTTTTTTTTA	NA	False	NA	-10	True	TATAAA	-13	NA	46867136	46859259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_27562_5	chr17	-	2712	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-101	5	-101	-5	multi-exon	FALSE	canonical	3	76	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTAACTTTTTTTTA	NA	False	NA	-10	True	TATAAA	-13	NA	46867202	46859259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_27563_4	chr17	-	4135	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-38	-1481	-38	1481	multi-exon	FALSE	canonical	3	76	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACAGACTGGGGTCTT	NA	False	NA	-11	True	AATAAA	-12	NA	46867139	46857773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_27564_3	chr17	-	3764	6	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	149	1489	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	30.5587957877924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGGTCTTTGGCTGTG	NA	False	NA	-3	True	AATAAA	-20	NA	46866952	46857765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46860105_46860361_46860439_46861826_46861947_46862456_46862719_46864485_46864753_46866253
Isoform_27567_396	chr17	-	4209	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	26	0	26	0	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940404	46875396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
Isoform_27569_8	chr17	-	3206	13	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	26	10766	26	-10766	5prime_fragment	FALSE	canonical	3	399	junction_8	43.6471807667905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGGCATGGTAATTC	NA	False	NA	NA	False	AATAAA	-15	NA	46940404	46886162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
Isoform_2757_784	chr10	+	1189	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	212	0	-47	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378238	42411366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_27571_8	chr17	-	2955	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	-634	1	244	-1	multi-exon	FALSE	canonical	3	33	junction_15	25.3531501439608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTTTGTGTTCGGAGT	NA	False	NA	-10	True	AATAAA	-10	NA	46956704	46941557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
Isoform_27573_34	chr17	-	2371	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956936	46941552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
Isoform_27574_8	chr17	-	2448	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	-68	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTGTTCGGAGTCT	NA	False	NA	-8	True	AATAAA	-12	NA	46957016	46941555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
Isoform_27575_10	chr17	-	2619	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	248	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	32.0511675879366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956700	46941552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956416
Isoform_27576_52	chr17	-	2317	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-7	3	-7	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956955	46941552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_27577_15	chr17	-	2368	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-57	2	-57	-2	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCGGAGTCTTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	46957005	46941551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_27578_4	chr17	-	2479	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-169	3	-169	-3	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46957117	46941552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
Isoform_27579_137	chr17	-	1247	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	46	-4	-19	1	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	46985232	46978382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
Isoform_2758_50	chr10	+	1393	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	8	0	8	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378034	42411366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_27580_79	chr17	-	1447	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	46	-204	-19	201	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	46985232	46978182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
Isoform_27582_5	chr17	-	957	4	FSM	ENSMUSG00000023971.10	ENSMUST00000233247.2	406	4	-60	-491	22	1	multi-exon	FALSE	canonical	3	56	junction_3	166.85522666871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	46985256	46978382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46985122
Isoform_27587_334	chr17	-	2113	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	-17	4	-7	-1	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991847	46985479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
Isoform_27591_17	chr17	-	1955	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	0	-1	0	1	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTCCTATTTCTGGCG	NA	False	NA	-2	True	TATAAA	-15	NA	46991840	46985477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
Isoform_27593_11	chr17	-	1732	10	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_9	133.12214756696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991832	46985479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46991627
Isoform_27598_70	chr17	-	2932	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	-6	0	-6	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1103	False	NA	NA	False	AATAAA	-15	NA	47015934	46993916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
Isoform_27599_793	chr17	-	2905	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	21	0	21	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
Isoform_276_350	SIRV3	+	780	5	FSM	SIRV3A	SIRV307	779	5	0	-1	0	1	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1963	8940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
Isoform_2760_227	chr10	+	1354	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	47	0	47	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378073	42411366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
Isoform_27604_106	chr17	-	2908	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	130	0	21	0	multi-exon	FALSE	canonical	3	79	junction_14	104.207504919908	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
Isoform_27609_19	chr17	-	3039	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	369	junction_8	38.3709702893574	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1130	False	NA	NA	False	AATAAA	-15	NA	47015907	46993916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
Isoform_27611_13	chr17	-	1093	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-59	1	-59	-1	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTGGTGTTTCT	2920	False	NA	NA	False	AGTAAA	-22	NA	47040153	47036590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
Isoform_27612_22	chr17	-	1035	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-1	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTGGTGTTTCT	2978	False	NA	NA	False	AGTAAA	-22	NA	47040095	47036590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
Isoform_27613_302	chr17	-	1854	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	2	52	2	-1	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGCTACTGCTATGA	NA	False	NA	-19	True	NA	NA	NA	47063138	47046682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_27614_10	chr17	-	1905	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	-2	5	-2	-5	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTGCCAAAGGGGTTT	NA	False	NA	28	True	NA	NA	NA	47063142	47046635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_27619_9	chr17	-	2280	5	NIC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	416	junction_3	46.8268085609088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTACTGCTATGAAT	NA	False	NA	-17	True	NA	NA	NA	47063128	47046680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_47047835_47048100_47048776_47054111_47054209_47058346_47058471_47062898
Isoform_27621_5	chr17	-	632	3	FSM	ENSMUSG00000023973.14	ENSMUST00000121671.2	561	3	-21	-50	-2	50	multi-exon	FALSE	canonical	1	1	junction_1	258.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGGACTACCAGAGT	NA	False	NA	NA	False	NA	NA	NA	47063142	47057862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47058127_47058346_47058471_47062898
Isoform_27622_5	chr17	-	852	2	FSM	ENSMUSG00000023973.14	ENSMUST00000148656.2	531	2	-39	-282	-2	50	multi-exon	FALSE	canonical	3	518	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGGACTACCAGAGT	NA	False	NA	NA	False	NA	NA	NA	47063142	47057862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47058471_47062898
Isoform_27626_297	chr17	-	2014	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	591	1	-591	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093581	47085423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_27627_86	chr17	-	2601	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	4	1	-4	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAAGAGCCGTTCGC	NA	False	NA	NA	False	NA	NA	NA	47093581	47084836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_27629_383	chr17	-	1411	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	1194	1	-1194	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093581	47086026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
Isoform_27637_64	chr17	-	2012	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-591	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_5	819.849461113983	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093581	47085423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091476_47092708_47092818_47093544
Isoform_27638_18	chr17	-	2599	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	canonical	2	59	junction_5	819.849461113983	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAAGAGCCGTTCGC	NA	False	NA	NA	False	NA	NA	NA	47093581	47084836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091476_47092708_47092818_47093544
Isoform_27639_88	chr17	-	1409	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1194	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_5	819.849461113983	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093581	47086026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091476_47092708_47092818_47093544
Isoform_27643_3	chr17	-	4397	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19200	6	-28	-6	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACGTGTCACTGTGAT	NA	False	NA	-10	True	AATACA	-13	NA	47123139	47109051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
Isoform_27644_3	chr17	-	4220	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19377	6	149	-6	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACGTGTCACTGTGAT	NA	False	NA	-10	True	AATACA	-13	NA	47122962	47109051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
Isoform_27646_9	chr17	-	5689	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	11	-9	-1	3	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTTTTATTTTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	47321447	47241165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
Isoform_27649_3	chr17	-	748	2	ISM	ENSMUSG00000023977.16	ENSMUST00000225599.2	3625	29	25	43863	1	-43863	5prime_fragment	FALSE	canonical	3	100	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATATTCACGAAATGA	NA	False	NA	NA	False	AATAAA	-11	NA	47321457	47311413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_47311772_47321067
Isoform_27650_3	chr17	-	566	2	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	5170	4	5170	-4	3prime_fragment	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAGAGTCTCAGCTT	7006	False	NA	-4	True	NA	NA	NA	47706339	47705486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_47705746_47706032
Isoform_27651_17	chr17	-	512	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4881	1	4881	-1	3prime_fragment	FALSE	canonical	3	65	junction_1	4	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGTCTCAGCTTTTT	6717	False	NA	-1	True	NA	NA	NA	47706628	47705483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_47705746_47706032_47706127_47706472
Isoform_27652_26	chr17	-	1264	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTATTTATTATTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	47813212	47794287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27653_153	chr17	-	2539	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	240	0	-8	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCAGACATAGGGCC	NA	False	NA	-12	True	AATAAA	-23	NA	47813212	47799214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27656_22	chr17	-	2407	8	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	67.8948767265564	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_47800822_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27658_27	chr17	-	2796	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	0	-3	0	3	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGCCTCTCAAATGGT	NA	False	NA	-1	True	AATAAA	-34	NA	47813212	47799203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27660_35	chr17	-	1305	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	385	0	-385	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACTATTCTGGTAGC	NA	False	NA	-9	True	AATAAA	-16	NA	47813212	47803973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27662_8	chr17	-	1700	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	-10	0	10	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAACAAGCAAAAAC	NA	False	NA	NA	False	TATAAA	-37	NA	47813212	47803578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_27663_326	chr17	-	2548	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	258	1048	258	-1048	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTTGGTCTGTTGAGT	2599	False	NA	-1	True	NA	NA	NA	47922159	47911303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_27666_56	chr17	-	3600	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	255	-1	255	1	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAAGACCCCACAATCA	2596	False	NA	-5	True	AATAAA	-18	NA	47922162	47910254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_27667_29	chr17	-	2848	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-40	1046	-40	-1046	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGGTCTGTTGAGTTC	2301	False	NA	1	True	NA	NA	NA	47922457	47911301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_27669_53	chr17	-	1997	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-48	1905	-48	-1905	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTTGGTCCCT	2293	False	NA	-2	True	AAAACA	-18	NA	47922465	47912160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
Isoform_27675_409	chr17	-	504	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	148	97	33	-3	multi-exon	FALSE	canonical	3	3748	junction_1	369	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47998960	47997667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47997934_47998112_47998214_47998823
Isoform_27676_225	chr17	-	546	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	106	97	-9	-3	multi-exon	FALSE	canonical	3	3748	junction_1	369	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47999002	47997667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47997934_47998112_47998214_47998823
Isoform_27679_10	chr17	-	585	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	6	3	6	-3	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47998987	47997667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47997988_47998112_47998214_47998823
Isoform_2768_125	chr10	+	3005	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	-2	3	-2	-3	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTAATGTTGTAATTG	NA	False	NA	6	True	AATAAA	-15	NA	42554909	42578452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
Isoform_27680_23	chr17	-	558	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	33	3	33	-3	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGTATTTTATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	47998960	47997667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_47997988_47998112_47998214_47998823
Isoform_27682_17	chr17	-	1569	4	ISM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	22	-6	3	-2	intron_retention	FALSE	canonical	2	6	junction_1	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	2114	False	NA	-4	True	AATAAA	-20	NA	48144194	48126254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868
Isoform_27684_22	chr17	-	1356	5	FSM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	22	-7	3	-1	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCAGGACTCTTTACAA	2114	False	NA	-3	True	AATAAA	-21	NA	48144194	48126253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144169
Isoform_27685_3	chr17	-	1428	5	FSM	ENSMUSG00000032717.15	ENSMUST00000066368.13	1711	5	281	2	281	-2	multi-exon	FALSE	canonical	0	0	junction_4	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	973	False	NA	-4	True	AATAAA	-20	NA	48145335	48126254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48145237
Isoform_27686_3	chr17	-	910	2	NNC	ENSMUSG00000032717.15	novel	580	3	NA	NA	14608	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAGGACTCTTTACA	NA	False	NA	-4	True	AATAAA	-20	NA	48129486	48126254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_48127090_48129411
Isoform_27687_27	chr17	-	3188	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	170	641	1	-6	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235400	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27688_7	chr17	-	3410	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	-52	641	-52	-6	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235622	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27689_54	chr17	-	3190	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	2	6	2	-6	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235399	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27691_14	chr17	-	3378	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-186	6	-17	-6	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235587	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27692_3	chr17	-	3466	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-281	13	-112	-13	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGCAAAAACCAAAACTT	NA	False	NA	-20	True	NA	NA	NA	48235682	48178705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27693_4	chr17	-	3223	17	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	2	-6	combination_of_known_junctions	TRUE	canonical	3	24	junction_7	39.6781977287275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235399	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27694_4	chr17	-	3219	17	FSM	ENSMUSG00000023991.17	ENSMUST00000097311.9	3197	17	-32	10	9	-6	multi-exon	TRUE	canonical	3	24	junction_7	35.8812603422734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAACTTTTTGTTG	NA	False	NA	-13	True	NA	NA	NA	48235392	48178698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
Isoform_27695_7	chr17	-	2405	3	FSM	ENSMUSG00000023991.17	ENSMUST00000153752.2	788	3	-19	-1598	-10	1598	multi-exon	FALSE	canonical	3	147	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATGAGAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	48235370	48197219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48199146_48215220_48215460_48235130
Isoform_27696_14	chr17	-	3612	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	3	15	junction_8	14.6245185633537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716778	48693920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
Isoform_27697_12	chr17	-	3615	10	FSM	ENSMUSG00000023994.14	ENSMUST00000160319.8	1407	10	-20	-2188	0	3	multi-exon	FALSE	canonical	3	12	junction_8	15.1053910742547	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716778	48693920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
Isoform_27698_6	chr17	-	3596	10	NIC	ENSMUSG00000023994.14	novel	1407	10	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	17.4065405615529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGTGACTGGATTTTT	NA	False	NA	-14	True	AATAAA	-16	NA	48716764	48693922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706097_48707465_48707609_48716653
Isoform_27699_26	chr17	-	3514	9	NIC	ENSMUSG00000023994.14	novel	1407	10	NA	NA	5	3	combination_of_known_junctions	TRUE	canonical	3	19	junction_4	13.067134345372	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716764	48693920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
Isoform_27700_9	chr17	-	3630	10	FSM	ENSMUSG00000023994.14	ENSMUST00000078800.13	3653	10	15	8	0	3	multi-exon	FALSE	canonical	3	15	junction_8	14.2837212013545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716778	48693920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
Isoform_27702_14	chr17	-	3615	10	FSM	ENSMUSG00000023994.14	ENSMUST00000046719.14	3645	10	29	1	5	-1	multi-exon	FALSE	canonical	3	12	junction_8	14.7832070227182	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAAGTGACTGGATTT	NA	False	NA	-16	True	AATAAA	-14	NA	48716764	48693924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
Isoform_27703_3	chr17	-	3625	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	16.7648957167965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGTGACTGGATTTTT	NA	False	NA	-14	True	AATAAA	-16	NA	48716778	48693922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706094_48707465_48707609_48716653
Isoform_27704_3	chr17	-	3629	10	NIC	ENSMUSG00000023994.14	novel	3645	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	17.1601030242382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGACTGGATTTTTG	NA	False	NA	-13	True	AATAAA	-17	NA	48716778	48693921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706097_48707465_48707609_48716653
Isoform_27705_24	chr17	-	3593	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	109	4	-32	3	multi-exon	FALSE	canonical	3	22	junction_4	12.5492778676703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGGATTTTTGG	NA	False	NA	-12	True	AATAAA	-18	NA	48716825	48693920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
Isoform_27709_25	chr17	-	1226	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	195	-1	-117	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	48739763	48726257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48726662_48729968_48730534_48739506
Isoform_27711_15	chr17	-	953	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	5	-2	0	2	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGTGTAAGGTGGAAG	NA	False	NA	1	True	AATAAA	-21	NA	48758545	48755460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
Isoform_27713_35	chr17	-	3011	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	16	1002	16	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	-27	True	AATAAA	-14	NA	50497686	50300286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_27715_42	chr17	-	2811	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	216	1002	39	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	-27	True	AATAAA	-14	NA	50497486	50300286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_27718_3	chr17	-	3329	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	20	680	20	323	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTTAAGCTTTAATT	NA	False	NA	NA	False	ATTAAA	-30	NA	50497682	50299964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
Isoform_27719_96	chr17	-	2936	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	37	3	0	-3	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATCACTGACTTACTG	NA	False	NA	-8	True	AATAAA	-13	NA	50600627	50586427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
Isoform_27723_29	chr17	-	2885	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATCACTGACTTACTG	NA	False	NA	-8	True	AATAAA	-13	NA	50600627	50586427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
Isoform_27725_3	chr17	-	4314	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1676	3	-648	2	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAGAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52120356	52046501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
Isoform_27726_7	chr17	-	1104	4	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	40	50631	25	-50372	5prime_fragment	FALSE	canonical	3	22	junction_3	8.16496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAGACAAAAAAGAA	NA	False	NA	NA	False	GATAAA	-30	NA	53770309	53756547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_53756594_53758578_53758723_53759588_53759652_53769458
Isoform_27727_68	chr17	-	2307	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	52	1269	-3	-1269	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATGTGTGTATGTAT	NA	False	NA	-4	True	AATAAA	-23	NA	53996309	53983082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_27728_7	chr17	-	2390	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	-34	1272	-34	-1272	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTATGTGTGTATG	NA	False	NA	-7	True	AATAAA	-20	NA	53996395	53983085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_27729_21	chr17	-	3572	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	52	4	-3	-4	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCAGTTGCCGCTTAC	NA	False	NA	-4	True	AATAAA	-26	NA	53996309	53981817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
Isoform_2773_6	chr10	+	3777	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	129	2126	10	-4	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTTTGTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	42637620	42706384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_27737_4	chr17	-	4260	18	NNC	ENSMUSG00000024174.10	novel	3523	17	NA	NA	13	758	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.03131896352185	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTTGTTTTATTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	56019594	55958192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_55958751_55958786_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981140_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
Isoform_27738_3	chr17	-	1915	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	-25	-1	-25	1	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATATTTATGTTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	56252284	56245379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
Isoform_27739_3	chr17	-	1494	13	FSM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	10	5	-1	0	multi-exon	FALSE	canonical	1	3	junction_8	11.0839598820398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCATGTGGCTGTA	NA	False	NA	-9	True	NA	NA	NA	56312574	56304081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
Isoform_2774_22	chr10	+	2680	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	120	3232	1	-1	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637611	42705278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_27740_3	chr17	-	806	5	NIC	ENSMUSG00000038781.8	novel	1597	12	NA	NA	-1780	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	10.8972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTAGGATTGTGCC	NA	False	NA	1	True	NA	NA	NA	56307260	56304071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56307086
Isoform_27741_2323	chr17	-	2043	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	30	0	-29	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343605	56323749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
Isoform_27745_92	chr17	-	2111	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-20	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343596	56323749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
Isoform_2775_3	chr10	+	3359	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	100	2573	-19	-451	multi-exon	TRUE	canonical	3	208	junction_15	23.0789947788026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTGTAATCGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	42637591	42705937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
Isoform_27753_184	chr17	-	1450	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	24	1475	13	16	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTTCCCAAACCCAT	6330	False	NA	-1	True	AATAAA	-31	NA	56382004	56375519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
Isoform_27754_135	chr17	-	1714	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	31	1204	20	1	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCCAGTGTTTCATCAG	6337	False	NA	-1	True	AATAAA	-18	NA	56381997	56375248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
Isoform_27757_7	chr17	-	1973	9	FSM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	13	0	13	0	multi-exon	FALSE	canonical	2	6	junction_1	3.19912097301743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTTTTGGAACTTGGG	1106	False	NA	NA	False	AATAAA	-20	NA	56424583	56418600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56419542_56419869_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
Isoform_27758_9	chr17	-	1309	8	ISM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	3	1002	3	-996	5prime_fragment	FALSE	canonical	2	7	junction_2	3.09047252182628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAGATAGGCCAAGGC	9998	False	NA	NA	False	ATTAAA	-10	NA	56424593	56419602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
Isoform_27759_12	chr17	-	3750	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	-14	0	-14	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8337	False	NA	NA	False	AATAAA	-22	NA	56447357	56430084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
Isoform_2776_103	chr10	+	2125	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	2	0	2	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097483	43316598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
Isoform_27760_670	chr17	-	901	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	10	799	10	-799	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGATTCTCATCGTTT	NA	False	NA	-2	True	AATAAA	-43	NA	56490910	56483542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_27761_9	chr17	-	992	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	-80	798	-80	-798	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGATTCTCATCGTTTT	NA	False	NA	-1	True	AATAAA	-44	NA	56491000	56483541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_27762_126	chr17	-	1174	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	10	526	10	-526	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTATGCTCTCTCTGTG	NA	False	NA	-1	True	AATGAA	-20	NA	56490910	56483269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
Isoform_27765_58	chr17	-	3400	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-15	-11	1	1	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	56525904	56493805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
Isoform_27766_128	chr17	-	3457	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	53	-136	53	126	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAAGTGGTGCCGCAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	56525836	56493680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
Isoform_27767_13	chr17	-	2825	2	FSM	ENSMUSG00000047123.9	ENSMUST00000058136.9	2992	2	21	146	21	-146	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGCGTCACCACACT	834	False	NA	NA	False	AATAAA	-20	NA	56583765	56576464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56579218_56583693
Isoform_27775_964	chr17	-	2160	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	1485	0	-1485	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGGTGTATATGTGT	NA	False	NA	-4	True	AATAAA	-22	NA	56597511	56585960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
Isoform_27777_67	chr17	-	2187	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	-27	1485	-27	-1485	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGGTGTATATGTGT	NA	False	NA	-4	True	AATAAA	-22	NA	56597538	56585960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
Isoform_27786_4	chr17	-	3783	19	ISM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	37045	1	-38	-1	3prime_fragment	FALSE	canonical	3	225	junction_14	33.16536383073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56732171	56719431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879
Isoform_27787_20	chr17	-	3973	20	ISM	ENSMUSG00000013236.18	ENSMUST00000067538.6	6855	33	50774	-2	-248	0	3prime_fragment	FALSE	canonical	3	104	junction_19	52.4364805029345	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56732709	56719430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326
Isoform_27788_5	chr17	-	5608	29	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_19	61.8340747979821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56783447	56719425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_27789_6	chr17	-	2394	6	FSM	ENSMUSG00000013236.18	ENSMUST00000224571.2	2336	6	-55	-3	0	2	multi-exon	FALSE	canonical	3	132	junction_5	43.8296703158945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAACAA	NA	False	NA	NA	False	NA	NA	NA	56783444	56752844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
Isoform_2779_13	chr10	+	1919	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-103	0	-103	0	multi-exon	FALSE	canonical	3	74	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455061	43460261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_43455319_43458599
Isoform_27790_11	chr17	-	3221	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	50	6	-11	4	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTGCTGCCA	NA	False	NA	-4	True	AATAAA	-25	NA	56891535	56869944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_27791_5	chr17	-	3367	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-1	4	intron_retention	FALSE	canonical	3	72	junction_14	53.7949322598524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTGCTGCCA	NA	False	NA	-4	True	AATAAA	-25	NA	56891563	56869944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_27792_4	chr17	-	1099	10	FSM	ENSMUSG00000042625.17	ENSMUST00000155983.2	1090	10	49	-58	-1	58	multi-exon	FALSE	canonical	3	24	junction_4	47.2215686229278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGACGTGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	56891513	56878209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_27793_4	chr17	-	3114	9	NIC	ENSMUSG00000042625.17	novel	1090	10	NA	NA	-15	61	intron_retention	FALSE	canonical	3	101	junction_5	28.3480047798782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGACGTGGCGGCCCTGT	NA	False	NA	NA	False	NA	NA	NA	56891600	56878206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
Isoform_27796_357	chr17	-	516	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	69	170	-20	-2	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCGGTTTTCTGGTG	NA	False	NA	-27	True	AATAAA	-16	NA	56916702	56914621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_27797_44	chr17	-	684	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	72	-1	-17	1	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGCTTGGATAGGAAA	NA	False	NA	-31	True	TTTAAA	-28	NA	56916699	56914450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_27798_78	chr17	-	644	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-58	169	-58	-1	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCGGTTTTCTGGTGG	NA	False	NA	-26	True	AATAAA	-17	NA	56916829	56914620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_278_227	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_4003_4081_6057
Isoform_2780_36	chr10	+	1810	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	2	4	2	-4	multi-exon	FALSE	canonical	3	74	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGCAGTCTGTTGAAT	NA	False	NA	6	True	AATAAA	-15	NA	43455166	43460257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_43455319_43458599
Isoform_27800_8	chr17	-	807	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-46	-6	-46	6	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGGATAGGAAAGGGTT	NA	False	NA	-26	True	TTTAAA	-33	NA	56916817	56914445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
Isoform_27807_702	chr17	-	2948	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	0	3	0	-3	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1571	False	NA	-15	True	AATAAA	-14	NA	56933887	56921299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_27808_18	chr17	-	2999	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	-51	3	-51	-3	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1520	False	NA	-15	True	AATAAA	-14	NA	56933938	56921299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_2781_97	chr10	+	2984	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	-2	-1	-2	1	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTTTTTGGTCACTGT	NA	False	NA	9	True	NA	NA	NA	43777800	43823859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
Isoform_27813_9	chr17	-	4259	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	584	junction_13	78.4682242836055	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1568	False	NA	-15	True	AATAAA	-14	NA	56933890	56921299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
Isoform_27816_140	chr17	-	2088	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	137	1	137	-1	multi-exon	FALSE	canonical	3	64	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	7705	False	NA	-7	True	AATAAA	-15	NA	57023840	57020936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57022818_57023633
Isoform_27817_8	chr17	-	1980	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	-16	1	-11	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTCTACCTTTTTT	6849	False	NA	-7	True	AATAAA	-15	NA	57024696	57020936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57022818_57024597
Isoform_27818_3	chr17	-	2012	2	FSM	ENSMUSG00000054723.7	ENSMUST00000233400.2	345	2	17	-1684	17	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGGACTCTACCTTTT	6540	False	NA	-9	True	AATAAA	-13	NA	57025005	57020938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57022818_57024872
Isoform_27819_117	chr17	-	1019	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	6	-2	6	2	multi-exon	FALSE	canonical	3	134	junction_2	5	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGTCGTTCATGCTC	NA	False	NA	-1	True	CATAAA	-17	NA	57064524	57058322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57058831_57059308_57059491_57064195
Isoform_27821_20	chr17	-	3426	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-75	-1	-70	1	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138083	57082898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
Isoform_27824_7	chr17	-	3348	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-84	1	combination_of_known_junctions	FALSE	canonical	3	62	junction_16	78.7249960304858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138097	57082898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
Isoform_27825_81	chr17	-	3333	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	-50	0	-50	0	multi-exon	TRUE	canonical	3	178	junction_12	29.2883695986991	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138063	57082896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
Isoform_27827_26	chr17	-	3280	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_15	59.2522292126353	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138102	57082896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
Isoform_27829_4	chr17	-	657	4	ISM	ENSMUSG00000024206.16	ENSMUST00000233643.2	4141	5	-165	4235	-91	-4235	5prime_fragment	FALSE	canonical	3	258	junction_2	15.2970585407784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGTCATAGGCCCCTG	NA	False	NA	-7	True	AATAAA	-8	NA	57138104	57111143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_57111397_57112357_57112448_57115233_57115326_57137882
Isoform_27830_31	chr17	-	2580	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-82	1138	-82	-1138	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATAGGATGGTGTGT	5952	False	NA	NA	False	AAAACA	-14	NA	57242497	57200748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_27831_30	chr17	-	3720	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-82	-2	-82	2	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCCTGCCTTCAATTC	5952	False	NA	-1	True	AATAAA	-17	NA	57242497	57199608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_27833_5	chr17	-	3525	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGCCTGCCTTCAATT	6020	False	NA	-2	True	AATAAA	-16	NA	57242429	57199609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_27834_3	chr17	-	3588	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-74	4	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTGCCTTCAATTCAG	5960	False	NA	1	True	AATAAA	-19	NA	57242489	57199606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
Isoform_27835_52	chr17	-	1829	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-109	-3	-109	3	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCGAGTCATCACTG	NA	False	NA	-3	True	AATAAA	-16	NA	57318397	57310401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
Isoform_27836_130	chr17	-	1732	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-14	-1	-14	1	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGCGAGTCATCAC	NA	False	NA	-5	True	AATAAA	-14	NA	57318302	57310403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
Isoform_27846_56	chr17	-	3973	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-1	6	-1	-6	multi-exon	TRUE	canonical	3	570	junction_17	70.4455420481926	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTGTCCTGC	NA	False	NA	-15	True	AATAAA	-9	NA	57338489	57328056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_27847_3	chr17	-	3645	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-26	359	8	-6	multi-exon	FALSE	canonical	3	570	junction_17	70.4455420481926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAGAAACAGTCAC	NA	False	NA	NA	False	AATAAA	-7	NA	57338514	57328409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_27848_3	chr17	-	4067	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-98	9	-64	-9	multi-exon	FALSE	canonical	3	570	junction_17	70.4455420481926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAACCTCCCTGTGTCC	NA	False	NA	-18	True	AATAAA	-6	NA	57338586	57328059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
Isoform_27849_3	chr17	-	3334	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	28	0	-16	0	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTTTTAATTGTTT	NA	False	NA	-7	True	AATAAA	-16	NA	57366835	57350710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
Isoform_2785_3	chr10	+	2785	7	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	58.7983843315443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTTTTTGGTCACTGT	NA	False	NA	9	True	NA	NA	NA	43777813	43823859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43808358_43808543_43811994_43812088_43822416
Isoform_27850_4	chr17	-	1229	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1171	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_2	6.23027499638758	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTATCTGGGGCTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	57377626	57373054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
Isoform_27851_168	chr17	-	2089	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	31	-56	5	28	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554658	57541915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
Isoform_27852_8	chr17	-	1998	17	NNC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	301	27	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	52.5403119042893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554362	57541916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
Isoform_27853_264	chr17	-	2100	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	24	281	15	28	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554648	57541915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
Isoform_27854_7	chr17	-	2018	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	303	28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	49.7622079870859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGCGGAGCCCTGTG	NA	False	NA	-3	True	AAAAAG	-39	NA	57554360	57541915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
Isoform_27857_17	chr17	-	3542	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	75	496	-29	-3	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTTGTTTGTGTA	NA	False	NA	-16	True	AATAAA	-22	NA	59320292	59307108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
Isoform_2786_43	chr10	+	2349	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	4	-1	4	1	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144357	44240288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_27864_5	chr17	-	4542	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-42	-12	9	-2	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATTGTGTGACCCT	NA	False	NA	-6	True	AATAAA	-27	NA	64638902	64588002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
Isoform_27866_43	chr17	-	1989	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-346	1726	-346	367	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTGTCTGTCATG	2617	False	NA	-5	True	AATAAA	-26	NA	65920896	65887047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_27867_1194	chr17	-	1619	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	24	1726	24	367	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTGTCTGTCATG	2987	False	NA	-5	True	AATAAA	-26	NA	65920526	65887047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_2787_102	chr10	+	2230	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	123	-1	66	1	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144476	44240288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_27871_175	chr17	-	1655	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-14	1728	-14	365	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTTTGTGTCTGTCA	2949	False	NA	-7	True	AATAAA	-24	NA	65920564	65887049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_27878_17	chr17	-	1734	7	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	21	365	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	1604.61529657423	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTTTGTGTCTGTCA	2984	False	NA	-7	True	AATAAA	-24	NA	65920529	65887049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_65887843_65889574_65889749_65894047_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
Isoform_27879_63	chr17	-	3360	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	110	3	-2	-3	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGAGTGTCCTTTCCTC	NA	False	NA	-3	True	AATAAA	-12	NA	66079637	65958726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
Isoform_27882_12	chr17	-	3687	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	112	12	112	-12	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	66191837	66155424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
Isoform_27886_5	chr17	-	3651	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	483	-335	-361	-13	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66192310	66155425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
Isoform_27901_3	chr17	-	3942	6	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	44	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	105.899952785636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATGTTTTTTATTAAT	8738	False	NA	-1	True	AATAAA	-17	NA	66258177	66230061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_66233154_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
Isoform_27902_69	chr17	-	4032	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	54	0	-35	0	multi-exon	FALSE	canonical	3	222	junction_1	25.0636689253589	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8748	False	NA	1	True	AATAAA	-19	NA	66258167	66230059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
Isoform_27904_6	chr17	-	1694	9	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	-6	21292	-6	32	5prime_fragment	FALSE	canonical	2	19	junction_6	22.0383189014044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAGAAAAAGAGGGGAAA	NA	False	NA	NA	False	AATAAA	-23	NA	66384074	66293984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
Isoform_27908_7	chr17	-	942	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-5	6	0	-6	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAACATTTTTTAGG	NA	False	NA	NA	False	AATAAA	-24	NA	66384039	66344139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
Isoform_27909_6	chr17	-	482	3	ISM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-40	12647	-6	0	5prime_fragment	FALSE	canonical	3	75	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGAACTTATCTTCTG	NA	False	NA	NA	False	NA	NA	NA	66384074	66356780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66356929_66359948_66360087_66383878
Isoform_27912_103	chr17	-	948	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	-51	800	-51	3	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTATTCGGTTTGCT	5401	False	NA	-8	True	AATAAA	-18	NA	66408605	66386432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
Isoform_27913_545	chr17	-	838	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	59	800	-5	3	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTATTCGGTTTGCT	5511	False	NA	-8	True	AATAAA	-18	NA	66408495	66386432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
Isoform_27916_3	chr17	-	2910	3	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	39352	2	-13	-2	3prime_fragment	FALSE	canonical	3	153	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66653553	66643984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66645150_66649820_66651361_66653348
Isoform_27917_7	chr17	-	3394	6	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	27766	2	-11599	-2	3prime_fragment	FALSE	canonical	3	146	junction_3	33.3550595862157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66665139	66643984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016
Isoform_27918_4	chr17	-	3553	6	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	27616	-7	-11749	1	3prime_fragment	FALSE	canonical	3	146	junction_3	33.3550595862157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGGTGTCACCGTTTA	NA	False	NA	-12	True	AATAAA	-22	NA	66665289	66643975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016
Isoform_27919_3	chr17	-	7243	14	FSM	ENSMUSG00000052105.18	ENSMUST00000086693.12	7221	14	-30	8	-30	-2	multi-exon	FALSE	canonical	3	123	junction_12	28.2669020495577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66756775	66643984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27920_3	chr17	-	7278	14	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	50.5525679879619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACAGGGTCTTGGTGT	NA	False	NA	-21	True	AATAAA	-13	NA	66756777	66643984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687465_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27921_13	chr17	-	4798	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-39	10974	-39	6	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	66756784	66654954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27922_6	chr17	-	3335	9	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-43	6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	65.5858216385218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGTACAGTTTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	66756788	66654954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27923_7	chr17	-	5024	7	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-37	29833	-37	-475	5prime_fragment	FALSE	canonical	3	123	junction_5	16.2044232644465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCACCCTTCCTAGA	NA	False	NA	NA	False	AATAAA	-30	NA	66756782	66673813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27924_21	chr17	-	2010	4	FSM	ENSMUSG00000052105.18	ENSMUST00000127259.2	611	4	-1420	21	-39	-21	multi-exon	FALSE	canonical	3	123	junction_2	12.5521135891752	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	66756784	66692761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66692915_66743074_66743234_66745161_66745387_66755311
Isoform_27926_10	chr17	-	2247	7	NIC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	101.840425284963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTGAATTTGCCGTG	NA	False	NA	-9	True	AATAAA	-17	NA	66826717	66801511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66811983_66812174_66813027_66813089_66826342
Isoform_27928_123	chr17	-	2012	6	FSM	ENSMUSG00000023460.14	ENSMUST00000167962.2	2010	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	66826667	66801506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
Isoform_27933_24	chr17	-	1456	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	-16	6	1	0	multi-exon	FALSE	canonical	3	41	junction_2	419.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71156801	71151205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71152268_71153166_71153394_71156634
Isoform_27934_9	chr17	-	1457	3	NIC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	-7	-7	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	428.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTGCAATGAAGAG	NA	False	NA	71	True	AATAAA	-13	NA	71156816	71151212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_71152268_71153166_71153394_71156641
Isoform_27935_8	chr17	-	2017	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-399	13	128	-7	multi-exon	FALSE	canonical	3	373	junction_2	253.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTGCAATGAAGAG	NA	False	NA	71	True	AATAAA	-13	NA	71158601	71151212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71152268_71153166_71153394_71157866
Isoform_27936_347	chr17	-	1620	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-2	13	-2	-7	multi-exon	FALSE	canonical	3	373	junction_2	253.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTGCAATGAAGAG	NA	False	NA	71	True	AATAAA	-13	NA	71158204	71151212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71152268_71153166_71153394_71157866
Isoform_27940_193	chr17	-	1327	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	54	7	54	-7	multi-exon	FALSE	canonical	3	296	junction_2	292	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTGCAATGAAGAG	NA	False	NA	71	True	AATAAA	-13	NA	71160487	71151212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71152268_71153166_71153394_71160442
Isoform_27941_49	chr17	-	1399	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	-18	7	-18	-7	multi-exon	FALSE	canonical	3	296	junction_2	292	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTGCAATGAAGAG	NA	False	NA	71	True	AATAAA	-13	NA	71160559	71151212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71152268_71153166_71153394_71160442
Isoform_27942_9	chr17	-	1504	4	Fusion	ENSMUSG00000047407.18_ENSMUSG00000097154.3	novel	1714	3	NA	NA	5	0	multi-exon	TRUE	canonical	3	16	junction_2	405.421043141846	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71231986	71151205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr17_-_71152268_71153166_71153394_71186892_71187002_71231880
Isoform_27943_13	chr17	-	1477	3	NNC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	435	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAAGAGCATTTTCTTG	NA	False	NA	81	True	AATAAA	-23	NA	71156814	71151202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_71152268_71153166_71153394_71156629
Isoform_27948_1067	chr17	-	940	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	374	829	14	64	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGATGCTGACTC	3418	False	NA	-20	True	AATAAA	-14	NA	71297511	71280956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
Isoform_2795_6	chr10	+	2134	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	67	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144477	44240288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
Isoform_27950_39	chr17	-	1208	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	106	829	106	64	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGATGCTGACTC	3150	False	NA	-20	True	AATAAA	-14	NA	71297779	71280956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
Isoform_27955_220	chr17	-	974	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	320	643	-47	-5	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCTTAGTTGTTTAG	2247	False	NA	21	True	ATTAAA	-9	NA	71309229	71301293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_27956_1286	chr17	-	921	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	375	641	8	-3	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTAGTTGTTTAGCG	2302	False	NA	-22	True	ATTAAA	-11	NA	71309174	71301291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_27958_30	chr17	-	1258	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	38	641	38	-3	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTAGTTGTTTAGCG	1965	False	NA	-22	True	ATTAAA	-11	NA	71309511	71301291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
Isoform_2796_4	chr10	+	2216	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGGTGGCTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	44144395	44240288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
Isoform_27964_12	chr17	-	1146	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12210	-843	-41	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTTCTGTATTT	NA	False	NA	-7	True	AATAAA	-15	NA	71563382	71559168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
Isoform_27965_4	chr17	-	2499	17	ISM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-151	81757	-151	22336	5prime_fragment	FALSE	canonical	3	108	junction_11	13.8293166859393	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAGGGGGAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	71782489	71733240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
Isoform_27967_4	chr17	-	2368	15	ISM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-151	82973	-151	21120	5prime_fragment	FALSE	canonical	3	108	junction_9	14.6670531798174	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGTAGAAGATGAAATG	NA	False	NA	NA	False	AAAACA	-8	NA	71782489	71734456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
Isoform_2797_3	chr10	+	2147	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	68	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	114.808536267997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTATGTGGTGGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	44144478	44240286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_27971_157	chr17	-	2170	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	32	-1	-18	1	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCCTCCCATTTCTGT	NA	False	NA	-10	True	AATAAA	-20	NA	71833820	71803093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
Isoform_27978_3	chr17	-	596	4	ISM	ENSMUSG00000024056.11	ENSMUST00000233750.2	3847	10	-20	14461	-3	1817	5prime_fragment	FALSE	canonical	3	8	junction_1	147.044966667419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAAACCTTTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	71833805	71830130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_71830439_71830576_71830655_71832627_71832738_71833705
Isoform_27979_18	chr17	-	1296	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-514	-1	-12	1	multi-exon	FALSE	canonical	3	25	junction_2	30	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTATGTATTTTTTAAG	NA	False	NA	-14	True	AATAAA	-18	NA	71905762	71895550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_71895980_71897482_71897518_71904930
Isoform_2798_4	chr10	+	2253	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	95	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	122.27198166383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTATGTGGTGGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	44144505	44240286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_44144581_44150636_44150691_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
Isoform_27981_26	chr17	-	1730	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-236	1669	-236	-3	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTCTGATTTAAACTT	NA	False	NA	NA	False	AATAAA	-16	NA	74602094	74507699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
Isoform_27984_3	chr17	-	1478	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATAGTCTGATTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	74602488	74507702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
Isoform_27986_22	chr17	-	771	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	-74	-3	24	3	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGTTGTTGTATATGA	NA	False	NA	-15	True	AATAAA	-19	NA	74623272	74606473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
Isoform_27988_27	chr17	-	716	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAGTTGTTGTATA	NA	False	NA	-18	True	AATAAA	-16	NA	74623220	74606476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
Isoform_27993_865	chr17	-	684	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	42	8	-13	0	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAGTTGTTGTATA	NA	False	NA	-18	True	AATAAA	-16	NA	74623416	74606476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
Isoform_27994_60	chr17	-	721	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	3	10	3	0	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATAGTTGTTGTA	NA	False	NA	-20	True	AATAAA	-14	NA	74623455	74606478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
Isoform_2800_457	chr10	+	2762	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-29	8200	-29	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943269	45035094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_28002_133	chr17	-	2726	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	84	7	0	2	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858857	75844087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
Isoform_28004_98	chr17	-	1907	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	32	0	-3	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725528	78685313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
Isoform_28007_4	chr17	-	6446	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-62	4	-22	3	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGCATTCATACAGTACA	NA	False	NA	NA	False	AATAAA	-20	NA	79142815	79060330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
Isoform_28008_5	chr17	-	3932	24	ISM	ENSMUSG00000039414.11	ENSMUST00000232947.2	4345	27	-6	10756	-2	-6840	5prime_fragment	FALSE	canonical	3	55	junction_11	9.98619084343158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGTGTCGGGTTAG	NA	False	NA	NA	False	NA	NA	NA	79142795	79102527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
Isoform_2801_1230	chr10	+	2720	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	13	8200	13	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943311	45035094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_28010_3	chr17	-	3721	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	30	562	5	-562	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79189972	79160554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
Isoform_28013_25	chr17	-	1140	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	1	-11	1	11	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202528	79192314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
Isoform_28014_10	chr17	-	821	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-46	-11	-46	11	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202575	79192314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
Isoform_28015_19	chr17	-	775	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	-11	0	11	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGTCAGTGTGTTG	NA	False	NA	-5	True	ATTAAA	-27	NA	79202529	79192314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
Isoform_28016_6	chr17	-	2972	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	1	8	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTGCTGTCAGTGTG	NA	False	NA	-8	True	ATTAAA	-24	NA	79202528	79192317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
Isoform_28020_49	chr17	-	3310	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	14	746	-11	93	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTACTGTCATTTAT	NA	False	NA	-44	True	AATAAA	-8	NA	79244481	79227180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
Isoform_28030_25	chr17	-	4766	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-35	12	-35	-12	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAACAA	NA	False	NA	NA	False	AATATA	-36	NA	79328280	79257989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_28032_3	chr17	-	5902	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-22	-1137	-22	-7	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATACTTTCCTATGTGA	NA	False	NA	-6	True	AATAAA	-15	NA	79328267	79256840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_28034_25	chr17	-	3585	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-16	-548	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTATGAAGTGTTTAAT	NA	False	NA	-7	True	NA	NA	NA	79328222	79277595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_28035_27	chr17	-	2213	9	NIC	ENSMUSG00000024070.16	novel	3201	7	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGGTGAGGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	79328242	79278987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_28037_19	chr17	-	3670	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-62	-548	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTATGAAGTGTTTAAT	NA	False	NA	-7	True	NA	NA	NA	79328307	79277595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
Isoform_28038_9	chr17	-	1987	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	6	272	6	-272	multi-exon	FALSE	canonical	3	71	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAGTCTACATTTTAT	NA	False	NA	-4	True	AATATA	-25	NA	79662514	79641427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79643146_79662245
Isoform_28040_13	chr17	-	1954	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	32	279	32	-279	multi-exon	FALSE	canonical	3	71	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTATTGCAAAGTCTAC	NA	False	NA	-11	True	AATATA	-18	NA	79662488	79641434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79643146_79662245
Isoform_28044_6	chr17	-	2586	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-590	269	-590	-269	multi-exon	FALSE	canonical	3	71	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTACATTTTATACA	NA	False	NA	-1	True	AATATA	-28	NA	79663110	79641424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_79643146_79662245
Isoform_28047_160	chr17	-	2870	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	72	676	0	-3	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3823	False	NA	NA	False	ATTAAA	-18	NA	80203480	80156494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28048_16	chr17	-	3528	14	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	103.863075544384	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTGTTCTGAAATTA	3819	False	NA	-4	True	AATAAA	-16	NA	80203484	80155820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_80156199_80156218_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28050_6	chr17	-	2952	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	-10	676	-10	-3	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3741	False	NA	NA	False	ATTAAA	-18	NA	80203562	80156494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28051_5	chr17	-	2627	12	FSM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	70	674	-2	-3	multi-exon	FALSE	canonical	3	19	junction_11	103.456941975757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3821	False	NA	NA	False	ATTAAA	-18	NA	80203482	80156494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
Isoform_28052_3	chr17	-	2802	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	96.5253360308462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3818	False	NA	NA	False	ATTAAA	-17	NA	80203485	80156495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80157708_80159953_80160386_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28053_4	chr17	-	3389	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3818	False	NA	NA	False	ATTAAA	-17	NA	80203485	80156495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28054_3	chr17	-	3169	4	ISM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	71	13773	-1	11238	5prime_fragment	FALSE	canonical	3	336	junction_2	38.5169515350781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3822	False	NA	NA	False	NA	NA	NA	80203481	80169591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_80172237_80172470_80172606_80183230_80183476_80203337
Isoform_28056_287	chr17	-	2132	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	19	858	-14	-4	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTAAGTTTGTTGTTAA	3589	False	NA	-8	True	AATAAA	-12	NA	80369637	80337773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_28058_37	chr17	-	3077	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-93	25	14	-25	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCTTTCTCTTTTA	3477	False	NA	-29	True	NA	NA	NA	80369749	80336940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_28059_120	chr17	-	2980	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	3	26	3	-26	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTCTTTCTCTTTT	3573	False	NA	-30	True	NA	NA	NA	80369653	80336941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_2806_40	chr10	+	2809	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	3	8121	3	-8121	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTTAGTTTCCAACAAT	NA	False	NA	7	True	AATAAA	-19	NA	44943301	45035173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_28060_133	chr17	-	2247	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTTAACTT	3477	False	NA	-5	True	AATAAA	-15	NA	80369749	80337770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_28061_123	chr17	-	2635	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	22	352	-11	-2	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGTGTTCATCTTCA	3592	False	NA	NA	False	TATAAA	-13	NA	80369634	80337267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_28064_18	chr17	-	2915	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-11	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATTTGTCTCAAC	3592	False	NA	3	True	NA	NA	NA	80369634	80336987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
Isoform_2807_22	chr10	+	2923	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-190	8200	-190	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943108	45035094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_28075_101	chr17	-	2281	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	2	5	0	-5	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514732	80507513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28077_340	chr17	-	1056	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	2	1230	0	0	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28079_29	chr17	-	1930	7	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	759	junction_3	536.547735268934	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_28083_135	chr17	-	2272	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	-1232	0	-5	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514732	80507513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28084_493	chr17	-	1047	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	-7	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28087_41	chr17	-	1920	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	2	-1	0	-1	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514732	80508739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_28089_108	chr17	-	1023	8	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_2809_62	chr10	+	2685	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-122	8370	-122	-8370	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGACTCCTGAATTCG	NA	False	NA	10	True	ACTAAA	-21	NA	44943176	45034924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
Isoform_28090_30	chr17	-	2248	8	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514732	80507513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28094_19	chr17	-	3306	6	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514732	80508739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
Isoform_28097_16	chr17	-	1022	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	822.802257869748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_28099_37	chr17	-	1011	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
Isoform_281_355	SIRV3	+	2017	3	FSM	SIRV3A	SIRV303	2018	3	1	0	1	0	multi-exon	FALSE	canonical	3	1857	junction_1	482	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1964	7822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_4568_4780_6057
Isoform_28103_3	chr17	-	2149	10	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	35561	-7	13260	5	3prime_fragment	FALSE	canonical	3	80	junction_8	8.63384096891663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	2703	False	NA	0	True	AATAAA	-20	NA	80562011	80545732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693
Isoform_28104_20	chr17	-	4756	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-15	-4	-15	2	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGGAGTAGACGTGAT	863	False	NA	-3	True	AATAAA	-17	NA	80597587	80545735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
Isoform_28107_4	chr17	-	4173	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	48	-1	-20	1	multi-exon	FALSE	canonical	3	139	junction_19	37.8671982269756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035474	80887944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_28108_4	chr17	-	4123	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	-32	-3	-31	-2	multi-exon	TRUE	canonical	3	111	junction_19	35.3232837516559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035485	80887942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
Isoform_28109_3	chr17	-	2235	11	FSM	ENSMUSG00000024246.10	ENSMUST00000234801.2	2239	11	5	-1	5	1	multi-exon	FALSE	canonical	2	2	junction_1	48.9983673197383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGCTTATAGACTCT	8154	False	NA	NA	False	ATTAAA	-23	NA	81372506	81333759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_81334400_81338052_81338444_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_28110_85	chr17	-	1821	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	1	11	1	-11	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTAACCTATAATTTG	8165	False	NA	NA	False	ATTAAA	-11	NA	81372495	81333771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_28111_8	chr17	-	1950	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.4774669479293	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTATAGACTCTTGT	8165	False	NA	NA	False	ATTAAA	-26	NA	81372495	81333756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
Isoform_28113_449	chr17	-	1064	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	1	11	1	5	multi-exon	TRUE	canonical	0	0	junction_1	644	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTTAGTTTGTTTG	9948	False	NA	-34	True	AATAAA	-12	NA	83821758	83809357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_83810167_83811528_83811658_83821632
Isoform_28116_3	chr17	-	1427	11	NNC	ENSMUSG00000000673.10	novel	1381	10	NA	NA	-391	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.89736659610103	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTACTTGCGAGTTTTA	6604	False	NA	NA	False	AATAAA	-14	NA	84154632	84138783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_84139151_84139255_84139339_84139755_84139825_84142207_84142354_84142619_84142664_84142903_84142994_84145900_84146008_84146229_84146314_84150624_84150704_84154065_84154252_84154460
Isoform_28117_3	chr17	-	1264	10	NNC	ENSMUSG00000000673.10	novel	1381	10	NA	NA	-375	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.76383420737639	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTACTTGCGAGTTTT	6620	False	NA	NA	False	AATAAA	-13	NA	84154616	84138784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_84139151_84139255_84139339_84139755_84139825_84142619_84142664_84142903_84142994_84145900_84146008_84146229_84146314_84150624_84150704_84154065_84154252_84154460
Isoform_28118_3	chr17	-	6496	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-102	1390	-13	71	multi-exon	TRUE	canonical	2	39	junction_31	15.529655412283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTATGTTTGATTCT	NA	False	NA	-46	True	TATAAA	-18	NA	84773646	84498893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
Isoform_28119_4	chr17	-	2662	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13700	71	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTATGTTTGATTCT	NA	False	NA	-46	True	TATAAA	-18	NA	84662508	84498893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
Isoform_28121_96	chr17	-	4402	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	-13	4	-9	-4	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097999	85012678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
Isoform_28122_20	chr17	-	4387	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	108.652796747492	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097986	85012678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015589_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
Isoform_28126_127	chr17	-	2758	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-23	-1	-6	0	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397675	85371956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
Isoform_28127_3	chr17	-	3817	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-12	-1071	5	11	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGTCTGCGAATCACTT	NA	False	NA	-7	True	TATAAA	-38	NA	85397664	85370886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
Isoform_28129_7	chr17	-	2637	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	51.2963080980473	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTTTGTGTAATTTT	NA	False	NA	-4	True	TTTAAA	-3	NA	85397695	85371958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397672
Isoform_28130_20	chr17	-	2212	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-16	1059	4	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397665	85371956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
Isoform_28132_52	chr17	-	3509	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	21	0	21	0	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452582	86292092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
Isoform_28137_76	chr17	-	948	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	40	0	40	0	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	87332794	87304683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
Isoform_28139_3	chr17	-	1744	4	NNC	ENSMUSG00000024150.13	novel	2038	4	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573340	87562093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
Isoform_28140_9	chr17	-	1892	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	15	-1304	0	-8	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573308	87562093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
Isoform_28141_5	chr17	-	2035	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	-26	8	5	-8	multi-exon	FALSE	canonical	3	15	junction_4	147.031246679065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573358	87562093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
Isoform_28142_3	chr17	-	1818	4	NIC	ENSMUSG00000024150.13	novel	813	5	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	142.964642093382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573323	87562093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573219
Isoform_28143_59	chr17	-	1775	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	40	223	0	-8	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGCAGCTGTTGAC	NA	False	NA	-10	True	AATAAA	-9	NA	87573323	87562093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
Isoform_28147_1682	chr17	-	1132	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	72	1	-7	-1	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCTCTGAATCTGAG	NA	False	NA	-6	True	AATAAA	-20	NA	87754291	87740840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
Isoform_28148_62	chr17	-	1185	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	19	1	19	-1	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGCTCTGAATCTGAG	NA	False	NA	-6	True	AATAAA	-20	NA	87754344	87740840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
Isoform_28152_10	chr17	-	2029	2	FSM	ENSMUSG00000050138.9	ENSMUST00000055221.9	1972	2	-89	32	-89	-32	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAACCAAAAAAACA	7883	False	NA	NA	False	NA	NA	NA	88105511	88053260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_88054270_88104491
Isoform_28153_4	chr17	-	1093	2	NNC	ENSMUSG00000050138.9	novel	1972	2	NA	NA	50978	-32	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACGAAACCAAAAAAACA	3768	False	NA	NA	False	NA	NA	NA	88054444	88053260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_88054270_88054360
Isoform_28154_17	chr17	-	2605	9	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057429	95034512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
Isoform_28155_17	chr17	-	2583	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	36	-4	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057411	95034516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
Isoform_28157_3	chr17	-	2568	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057447	95034516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
Isoform_28158_4	chr17	-	2584	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-16	-8	-16	8	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTCTCTTCCTTCCT	NA	False	NA	NA	False	AATATA	-24	NA	95057463	95034504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
Isoform_28159_12	chr17	-	3048	2	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10140	-22719	at_least_one_novel_splicesite	FALSE	canonical	3	399	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATTATAAGTA	2328	False	NA	NA	False	TTTAAA	-40	NA	6744561	6731519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6734422_6744415
Isoform_28160_42	chr17	-	2925	2	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAAGGTTGTCTGTTT	273	False	NA	-25	True	NA	NA	NA	35219330	35215708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35218446_35219142
Isoform_28162_21	chr17	-	2156	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	26.5736711803243	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGGCTCTGTGTGCTT	4821	False	NA	-1	True	ATTAAA	-20	NA	23805208	23794818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
Isoform_28163_3	chr17	-	2139	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	33.9493740737587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4816	False	NA	-2	True	ATTAAA	-19	NA	23805213	23794819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
Isoform_28164_11	chr17	-	714	4	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	14.6590889515307	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCATTGACTTAGGGCC	NA	False	NA	NA	False	NA	NA	NA	88932926	88923828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_88924018_88928723_88928829_88930105_88930383_88932783
Isoform_28165_13	chr17	-	3013	8	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-19	intron_retention	FALSE	canonical	3	5	junction_1	69.953920693612	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTGTAAATGACTCA	NA	False	NA	-23	True	AATAAA	-12	NA	47813212	47799225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_47801447_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
Isoform_28167_6	chr17	-	1511	2	Genic_Genomic	ENSMUSG00000067370.5	novel	1580	1	NA	NA	-309	-7	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTCAAGTGCAGCGTCT	NA	False	NA	-9	True	AATAAA	-10	NA	34170771	34168889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_-_34170253_34170623
Isoform_28168_5	chr17	-	816	4	NNC	ENSMUSG00000004945.16	novel	780	3	NA	NA	3	-9677	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	323.428508329121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTGTCATTTTTCACT	3471	False	NA	NA	False	AATAAA	-33	NA	5490515	5470821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_5471291_5483716_5483855_5489806_5489908_5490407
Isoform_28169_3	chr17	-	417	2	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	37	-7808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	33096879	33090443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_33090663_33096681
Isoform_28170_4	chr17	-	406	2	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGTTGTTTTTAAT	NA	False	NA	-26	True	NA	NA	NA	47403183	47400328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_47400653_47403101
Isoform_28172_239	chr17	+	1984	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	274	590	-263	-590	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGGTGGCCTGAGGT	NA	False	NA	28	True	AATAAA	-22	NA	36291016	36299764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28173_19	chr17	+	2548	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	258	42	258	-42	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGGCGGAGACTTAATT	NA	False	NA	NA	False	AAAAAG	-27	NA	36291000	36300312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28174_73	chr17	+	2250	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	3	595	3	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36290745	36299759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28175_147	chr17	+	2166	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	95	587	95	-587	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGGCCTGAGGTGAG	NA	False	NA	31	True	AATAAA	-25	NA	36290837	36299767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28178_20	chr17	+	2542	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-281	587	-281	-587	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGGCCTGAGGTGAG	NA	False	NA	31	True	AATAAA	-25	NA	36290461	36299767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28182_17	chr17	+	2782	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-531	597	-531	-597	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCTTCCCCAGGTGGC	NA	False	NA	21	True	AATAAA	-15	NA	36290211	36299757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
Isoform_28187_14	chr17	+	1065	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	52	-6	52	6	multi-exon	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTATTAGTCCACAGT	NA	False	NA	NA	False	ATTAAA	-25	NA	36305396	36349333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36305453_36348324
Isoform_28188_3	chr17	+	525	2	FSM	ENSMUSG00000024457.17	ENSMUST00000124307.2	522	2	-5	2	-5	-2	multi-exon	FALSE	canonical	3	158	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	37148020	37148745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37148157_37148356
Isoform_28189_52	chr17	+	2656	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	16	526	-11	-526	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148053	37169746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28190_51	chr17	+	3200	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	16	-18	-11	0	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148053	37170290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28191_30	chr17	+	3182	9	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	63	junction_5	65.2246119191215	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148053	37170290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28192_8	chr17	+	2668	9	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3	-527	intron_retention	FALSE	canonical	3	63	junction_5	65.2246119191215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37148022	37169745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28193_9	chr17	+	463	2	ISM	ENSMUSG00000024457.17	ENSMUST00000134325.8	4338	5	21	18175	-11	1	5prime_fragment	FALSE	canonical	3	108	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37148053	37148748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_37148157_37148388
Isoform_28194_37	chr17	+	3167	10	FSM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	19	1	-11	0	multi-exon	FALSE	canonical	3	108	junction_1	52.5084355362939	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148053	37170289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28197_15	chr17	+	2606	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-11	-526	intron_retention	FALSE	canonical	3	63	junction_5	72.172969316774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148053	37169746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28198_10	chr17	+	3150	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	63	junction_5	72.172969316774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148053	37170290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28200_4	chr17	+	2673	10	FSM	ENSMUSG00000024457.17	ENSMUST00000144182.8	1426	10	-23	-1224	-12	-529	multi-exon	FALSE	canonical	3	14	junction_1	76.2335592475883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCTTGTGAAGGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	37148052	37169743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37148176_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
Isoform_28201_4	chr17	+	2008	4	FSM	ENSMUSG00000036492.13	ENSMUST00000040498.12	1579	4	0	-429	0	429	multi-exon	FALSE	canonical	2	2	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGCTGATTTCTGT	6857	False	NA	NA	False	AATAAA	-20	NA	37253809	37259307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37254343_37256065_37256089_37256295_37256388_37257947
Isoform_28202_46	chr17	+	963	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	14	-1	-13	1	multi-exon	FALSE	canonical	0	0	junction_1	121.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269497	37276515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37269595_37275248_37275325_37275725
Isoform_28203_6	chr17	+	1008	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	19	-7	19	4	multi-exon	FALSE	canonical	3	19	junction_1	112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGGTACCATGTTTC	NA	False	NA	24	True	AATAAA	-24	NA	37269551	37276521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37269688_37275248_37275325_37275725
Isoform_28204_9	chr17	+	1347	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	-13	-682	-13	1	multi-exon	FALSE	canonical	3	30	junction_1	106.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269497	37276515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37269979_37275248_37275325_37275725
Isoform_2821_50	chr10	+	3589	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	11	185	11	1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCATCTTTCTGTGCT	1789	False	NA	5	True	ATTAAA	-18	NA	45453935	45588256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_28212_9	chr17	+	1821	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	-77	5	-34	-5	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAGGTCTTTGTAT	NA	False	NA	31	True	AATAAA	-36	NA	37313339	37321519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
Isoform_2822_27	chr10	+	3698	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	12	75	12	-1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCTTTATTTGATCT	1790	False	NA	7	True	AATAAA	-19	NA	45453936	45588366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_28226_8	chr17	+	1419	8	FSM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	20	-1	20	1	multi-exon	FALSE	canonical	2	2	junction_3	3.09047252182628	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCATGTGTTCAATG	NA	False	NA	NA	False	AATAAA	-14	NA	37581130	37585376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_37581226_37581412_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
Isoform_28228_17	chr17	+	2900	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	4	770	4	-770	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGATTCTTCCTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	41245579	41272109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
Isoform_28229_49	chr17	+	3314	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	31	329	31	-329	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTAGTGTGATGTTA	NA	False	NA	15	True	AATAAA	-16	NA	41245606	41272550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
Isoform_2823_3	chr10	+	3620	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTCTTTATTTGATC	1784	False	NA	6	True	AATAAA	-18	NA	45453930	45588365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
Isoform_28230_14	chr17	+	3644	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	31	-1	31	1	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCCTGTTGTGTGTTCC	NA	False	NA	NA	False	TATAAA	-24	NA	41245606	41272880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
Isoform_28234_6	chr17	+	1683	2	FSM	ENSMUSG00000023915.6	ENSMUST00000233482.2	1659	2	-23	-1	-10	1	multi-exon	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAAAAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	43327435	43349620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_43327984_43348485
Isoform_28236_10	chr17	+	3652	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-25	0	-25	0	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43327420	43400080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
Isoform_28238_6	chr17	+	2433	4	FSM	ENSMUSG00000023960.14	ENSMUST00000154166.8	2490	4	50	7	-16	1	multi-exon	FALSE	canonical	1	1	junction_1	7.40870359029762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	44389753	44397451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_44389790_44391537_44392402_44393634_44393812_44396095
Isoform_28239_4	chr17	+	1616	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	21	3181	-13	-3181	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGGAAGGCTGTTTC	NA	False	NA	4	True	AGTAAA	-22	NA	44389756	44394269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_44389874_44391537_44392402_44393634
Isoform_2824_6	chr10	+	1697	4	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	39	232550	39	-1	5prime_fragment	FALSE	canonical	3	92	junction_3	4.71404520791032	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	50468803	50495031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807
Isoform_28240_14	chr17	+	2492	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	37	5	3	-5	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAAAAAATAGTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	44389772	44397445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
Isoform_28241_5	chr17	+	1355	12	FSM	ENSMUSG00000038954.15	ENSMUST00000127798.8	1180	12	-175	0	69	0	multi-exon	FALSE	canonical	1	6	junction_10	31.9782984264006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGAGTGGCCTGCTTT	NA	False	NA	22	True	AATAAA	-23	NA	45088107	45430173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352194_45359168_45359280_45430029
Isoform_28242_96	chr17	+	1439	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	69	0	69	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088107	45430177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
Isoform_28243_19	chr17	+	1494	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	12	2	12	-2	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGAGTGGCCTGCTTTGT	NA	False	NA	24	True	AATAAA	-25	NA	45088050	45430175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
Isoform_28245_3	chr17	+	5853	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-6	-3269	-6	4	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	45744784	45752492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45745154_45747008
Isoform_28247_27	chr17	+	3349	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_8	22.4045468336421	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817766	45831769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
Isoform_28249_42	chr17	+	2442	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	-9	2	-9	1	multi-exon	FALSE	canonical	3	12	junction_2	2.44948974278318	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGGTTATACGTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	45866619	45874093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
Isoform_28251_5	chr17	+	1326	4	NIC	ENSMUSG00000037089.12	novel	850	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	193.511986421743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGAGCCAGCTCTAA	NA	False	NA	4	True	AATAAA	-13	NA	45874870	45876978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_45874995_45875505_45875700_45875850_45876006_45876125
Isoform_28252_19	chr17	+	852	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	-4	2	-4	-2	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGAGCCAGCTCTAAT	NA	False	NA	5	True	AATAAA	-14	NA	45874881	45876979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
Isoform_28253_234	chr17	+	1823	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	82	1	-4	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874881	45878595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_28256_9	chr17	+	2023	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	60	-177	-14	176	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATAACACCCAACCCTG	NA	False	NA	NA	False	NA	NA	NA	45874859	45878773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
Isoform_28257_7	chr17	+	2334	3	FSM	ENSMUSG00000037089.12	ENSMUST00000224559.2	2326	3	-8	0	-4	0	multi-exon	FALSE	canonical	3	396	junction_2	19	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874881	45878595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45875700_45875850_45876006_45877234
Isoform_28258_9	chr17	+	2139	3	FSM	ENSMUSG00000037089.12	ENSMUST00000224559.2	2326	3	189	-2	-52	0	multi-exon	FALSE	canonical	3	396	junction_2	19	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45875078	45878597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45875700_45875850_45876006_45877234
Isoform_2826_7	chr10	+	3676	21	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	15	134836	15	-17814	5prime_fragment	FALSE	canonical	3	83	junction_4	10.5114223585583	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATTAGAAGAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	50468779	50592745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580
Isoform_28260_157	chr17	+	619	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	26	0	-9	0	multi-exon	FALSE	canonical	3	814	junction_1	143	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	45997273	46009421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45997354_46006407_46006499_46008973
Isoform_28261_233	chr17	+	589	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	56	0	21	0	multi-exon	FALSE	canonical	3	814	junction_1	143	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	45997303	46009421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_45997354_46006407_46006499_46008973
Isoform_28264_15	chr17	+	683	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	-78	-95	-78	0	multi-exon	FALSE	canonical	3	1100	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	46006263	46009421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46006499_46008973
Isoform_28268_567	chr17	+	860	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	22	2	12	-2	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	17	True	AATAAA	-17	NA	46421933	46439834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
Isoform_2827_6	chr10	+	1171	6	ISM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	4	16305	4	-16305	5prime_fragment	FALSE	canonical	3	170	junction_2	13.4669966956259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCGAGTTTCAACGG	NA	False	NA	NA	False	NA	NA	NA	52109718	52181167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682
Isoform_28273_3	chr17	+	693	2	FSM	ENSMUSG00000023952.14	ENSMUST00000165686.2	608	2	-114	29	-2	-29	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	46471972	46473055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46472253_46472642
Isoform_28274_3	chr17	+	3143	11	ISM	ENSMUSG00000023952.14	ENSMUST00000172170.8	2587	13	42	-32	-3	0	intron_retention	FALSE	canonical	3	39	junction_1	11.6464586892325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472033	46480294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
Isoform_28275_11	chr17	+	2947	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	15	4	-2	-2	multi-exon	TRUE	canonical	3	39	junction_1	11.1762735698931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46471972	46480292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_28276_27	chr17	+	2884	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	80	2	1	0	multi-exon	FALSE	canonical	3	39	junction_1	11.1762735698931	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472037	46480294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_28278_3	chr17	+	2979	13	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_3	22.2991031209778	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46472068	46480292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_46472253_46474408_46474436_46474677_46474806_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
Isoform_28279_3	chr17	+	2118	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	-12	31	-12	-31	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACCTTGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46513730	46520564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
Isoform_2828_22	chr10	+	942	8	ISM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	9	8477	-5	-8477	5prime_fragment	FALSE	canonical	3	170	junction_2	12.1117247967009	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGTGAATTTAAACTT	NA	False	NA	NA	False	NA	NA	NA	52109723	52188995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909
Isoform_28280_7	chr17	+	1965	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	2	170	2	-170	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTTAATGTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	46513744	46520425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
Isoform_28282_5	chr17	+	1136	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	-47	1048	-12	-1048	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTCAGGGCAGTGAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	46513695	46519547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
Isoform_28283_79	chr17	+	3736	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	4	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513746	46553218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_28285_33	chr17	+	5044	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513744	46554524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_28286_42	chr17	+	3787	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-12	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	2	141	junction_5	54.3802084950264	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513695	46553218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547837_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
Isoform_28287_3	chr17	+	2469	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	13	-447	13	447	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTTTTGTTTTCGTTT	2593	False	NA	NA	False	NA	NA	NA	46559018	46563910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
Isoform_28288_185	chr17	+	1495	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	20	520	20	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2600	False	NA	23	True	ATTAAA	-18	NA	46559025	46562943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
Isoform_28289_3	chr17	+	1616	8	FSM	ENSMUSG00000071074.10	ENSMUST00000151488.2	1570	8	-32	-14	-12	-2	multi-exon	FALSE	canonical	3	158	junction_7	7.73542078324622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTAGCTCCTGTTG	2613	False	NA	21	True	ATTAAA	-16	NA	46559038	46562941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491
Isoform_2829_22	chr10	+	1920	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	5	1099	5	-1099	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCGGTGTTTGTTTTC	NA	False	NA	8	True	NA	NA	NA	52109719	52196373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
Isoform_28290_3	chr17	+	1609	6	FSM	ENSMUSG00000071073.6	ENSMUST00000233692.2	2010	6	407	-6	-46	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCAGCTGTAGTCTCT	8438	False	NA	NA	False	TATAAA	-12	NA	46564863	46568240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46565543_46566104_46566266_46566584_46566708_46567108_46567210_46567573_46567797_46567918
Isoform_28292_7	chr17	+	3177	6	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	8	14004	8	-3341	5prime_fragment	FALSE	canonical	3	36	junction_4	11.2427754580442	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAATCTAAGAGCC	NA	False	NA	NA	False	AGTAAA	-21	NA	46694664	46716946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708
Isoform_28293_241	chr17	+	588	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	49	553	49	-553	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTTTAACTACATGTAT	NA	False	NA	12	True	NA	NA	NA	46807685	46809997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
Isoform_28294_93	chr17	+	1141	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	49	0	49	0	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	14	True	NA	NA	NA	46807685	46810550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
Isoform_28298_1565	chr17	+	1018	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	13	0	-1	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957167	46961058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
Isoform_2830_6	chr10	+	3023	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	0	1	0	-1	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52109714	52197471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
Isoform_28300_49	chr17	+	1007	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	-8	-1	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957167	46961058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
Isoform_28302_33	chr17	+	5240	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	288	2	53	-2	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCTGTATGGGACTGC	NA	False	NA	17	True	AATAAA	-18	NA	46961550	46975288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
Isoform_28303_8	chr17	+	801	4	FSM	ENSMUSG00000002768.9	ENSMUST00000232732.2	748	4	14	-67	14	2	multi-exon	FALSE	canonical	3	20	junction_1	423.826222249953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACACCGCCTGTGCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	46991397	46994030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46991429_46992542_46992824_46992934_46993038_46993644
Isoform_28305_19	chr17	+	829	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	70	-226	-51	0	multi-exon	FALSE	canonical	3	42	junction_1	413.462076723959	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46991998	46994028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
Isoform_28306_352	chr17	+	813	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	139	-7	1	-2	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCTGTGCTCCTGAAT	NA	False	NA	3	True	AATAAA	-28	NA	46992050	46994035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
Isoform_28307_14	chr17	+	944	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	139	-138	1	129	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTTGGAGCACTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	46992050	46994166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
Isoform_28308_45	chr17	+	817	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	33	9	-23	0	multi-exon	FALSE	canonical	3	90	junction_1	390.850639275699	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46992082	46994028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
Isoform_2831_71	chr10	+	2412	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	12	2181	12	-2181	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATTTTGGTCCAGTC	NA	False	NA	7	True	AATAAA	-8	NA	52293654	52314098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_28310_7	chr17	+	884	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233612.2	766	4	-23	-95	-23	0	multi-exon	FALSE	canonical	3	19	junction_1	424.297327616169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46992082	46994028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_46992199_46992542_46992824_46992934_46993038_46993644
Isoform_28313_209	chr17	+	3173	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	27	0	14	0	multi-exon	FALSE	canonical	3	74	junction_1	12.2574913318346	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022415	47036467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
Isoform_28315_3	chr17	+	3419	15	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	5	-2	intron_retention	TRUE	canonical	3	74	junction_1	13.0054933448469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTTGTGAGAGGTT	NA	False	NA	9	True	AATAAA	-16	NA	47022406	47036465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035891_47036113
Isoform_28316_9	chr17	+	3364	16	FSM	ENSMUSG00000002763.17	ENSMUST00000144964.8	3383	16	18	1	5	-1	multi-exon	FALSE	canonical	3	74	junction_1	12.537942414926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022406	47036466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
Isoform_28319_20	chr17	+	1245	9	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	774.837634201515	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7146	False	NA	5	True	NA	NA	NA	47679820	47689604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_47679880_47680953_47681084_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_2832_36	chr10	+	3606	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	22	977	22	-977	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGTAGTATGTGAATGT	NA	False	NA	9	True	AATAAA	-22	NA	52293664	52315302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
Isoform_28322_403	chr17	+	1013	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	5	0	-2	0	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7146	False	NA	7	True	NA	NA	NA	47679820	47689606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_28324_548	chr17	+	1009	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	9	-1	-2	1	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGGTTTTGTTTAC	7146	False	NA	6	True	NA	NA	NA	47679820	47689605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_28327_15	chr17	+	1092	6	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1493	junction_5	178.399103136759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7146	False	NA	5	True	NA	NA	NA	47679820	47689604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_47679880_47683351_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
Isoform_28331_16	chr17	+	1636	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	29	3	18	-3	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTATTGTCCTGGAGGT	1159	False	NA	NA	False	ATTAAA	-12	NA	47696346	47703889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
Isoform_28332_7	chr17	+	1369	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	31546	497	31546	-3	3prime_fragment	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGGTTTGTGTGTTG	NA	False	NA	30	True	AATATA	-20	NA	47779275	47781066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_47779779_47780200
Isoform_28338_5653	chr17	+	1951	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	24	2	24	-2	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	5653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGCTCTTGTGATCCC	NA	False	NA	NA	False	AATAAA	-13	NA	47904418	47910612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
Isoform_28339_538	chr17	+	1994	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-19	2	15	-2	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGCTCTTGTGATCCC	NA	False	NA	NA	False	AATAAA	-13	NA	47904375	47910612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
Isoform_2835_17	chr10	+	1171	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-23	1053	-23	0	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTGTAAAGGTGTTGT	1498	False	NA	52	True	ATTAAA	-23	NA	53473024	53484268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28355_116	chr17	+	1873	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	14	167	11	3	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922520	47935176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
Isoform_28356_4	chr17	+	1615	3	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	133.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCGTTTTGGCCTTCTG	NA	False	NA	7	True	AATAAA	-12	NA	47922520	47935172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_47922618_47923887_47924043_47933809
Isoform_28357_4	chr17	+	601	3	FSM	ENSMUSG00000023984.18	ENSMUST00000146105.8	599	3	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_2	122	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTTTATTGTCCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	47922513	47961216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47922618_47923887_47924043_47960874
Isoform_28358_40	chr17	+	2160	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-17	1	-17	1	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48006105	48015210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
Isoform_28359_6	chr17	+	2314	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-171	1	-171	1	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48005951	48015210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
Isoform_2836_3	chr10	+	2337	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-151	15	44	-15	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAAAAAAAAATCTCA	1370	False	NA	NA	False	AATAAA	-20	NA	53472896	53485306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28360_11	chr17	+	1430	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	-47	5	-47	-5	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACCAGCCTGTTGAGT	NA	False	NA	11	True	AATAAA	-11	NA	48037719	48045402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_28361_11	chr17	+	946	6	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3294	-1	3292	1	3prime_fragment	FALSE	canonical	3	54	junction_1	149.361842516755	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041060	48045408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_28362_28	chr17	+	694	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3932	-1	3930	1	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041698	48045408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_28363_5	chr17	+	898	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3727	0	3725	0	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48041493	48045407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_28364_5	chr17	+	1023	4	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5192	-4	5190	4	3prime_fragment	FALSE	canonical	3	283	junction_1	65.5303152916436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGAGTCATTTGTAT	NA	False	NA	20	True	AATAAA	-20	NA	48042958	48045411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48043430_48043885_48044037_48044681_48044781_48045109
Isoform_28369_7	chr17	+	747	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5921	-1	5919	1	3prime_fragment	FALSE	canonical	3	421	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48043687	48045408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48044037_48044681_48044781_48045109
Isoform_2837_23	chr10	+	918	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	117	1166	117	77	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTCTAATGTGTTA	1638	False	NA	6	True	TATAAA	-19	NA	53473164	53484155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28370_1671	chr17	+	2312	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	27	3	27	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48047981	48103341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_28371_384	chr17	+	2345	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	-6	3	-6	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48047948	48103341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_28376_53	chr17	+	2358	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	760	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48050587	48103341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_28377_68	chr17	+	2143	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	975	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	False	NA	15	True	AGTAAA	-15	NA	48050802	48103341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
Isoform_28383_153	chr17	+	1161	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-33	7	33	5	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717074	48724287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28385_73	chr17	+	1165	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	32	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.287818268124	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717073	48724287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28387_11	chr17	+	2485	5	ISM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	199	-10	121	-2	intron_retention	FALSE	canonical	3	324	junction_1	247.498863633755	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACATGAACGTCTGTGT	NA	False	NA	19	True	AATAAA	-27	NA	48717240	48724292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248
Isoform_28389_96	chr17	+	1293	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	33	-2	33	2	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717074	48724284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_2839_17	chr10	+	1042	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-6	1165	-6	78	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAATGTGTTAT	1515	False	NA	7	True	TATAAA	-20	NA	53473041	53484156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28390_147	chr17	+	1109	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	232	-17	154	5	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTCTGTGTTCTGGAT	NA	False	NA	26	True	AATAAA	-34	NA	48717273	48724299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28393_84	chr17	+	1112	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	152	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAACGTCTGTGTTCTGG	NA	False	NA	24	True	AATAAA	-32	NA	48717271	48724297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28395_50	chr17	+	1300	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	32	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717073	48724287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28398_20	chr17	+	2833	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	0	5	0	1	multi-exon	TRUE	canonical	1	5	junction_1	7.66383552798467	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATACTGGTACTTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	48761928	48775709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
Isoform_28400_23	chr17	+	2618	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	-35	5	11	-2	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	NA	False	NA	4	True	AATAAA	-20	NA	49735402	49762458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
Isoform_28401_25	chr17	+	2633	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	11	2	11	-2	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTGGGGACTCTT	NA	False	NA	4	True	AATAAA	-20	NA	49735402	49762458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
Isoform_28402_15	chr17	+	3645	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	135	405	135	-405	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGGCCCAAACATGCTG	NA	False	NA	NA	False	AATAAA	-20	NA	50816565	50995107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_28403_3	chr17	+	3874	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-93	404	-93	-404	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816337	50995108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_28404_4	chr17	+	4044	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	145	-4	145	4	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAGTACATGCTTTTAG	NA	False	NA	NA	False	ATTAAA	-25	NA	50816575	50995516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
Isoform_28406_554	chr17	+	2304	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	54	8	1	-8	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACACTGAGTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	53786315	53814700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
Isoform_28411_11	chr17	+	2367	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	414.185948578655	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACACTGAGTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	53786313	53814700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_53786637_53790247_53790309_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
Isoform_28415_63	chr17	+	4349	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	304	0	304	0	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874302	53979748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
Isoform_28418_7	chr17	+	936	3	ISM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-11	5531	-9	26	5prime_fragment	FALSE	canonical	3	151	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	333	False	NA	NA	False	NA	NA	NA	56266162	56269754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_56266262_56267712_56267814_56269018
Isoform_28419_93	chr17	+	1660	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-2	2	0	2	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGTGTTGGAGTCTG	342	False	NA	6	True	NA	NA	NA	56266171	56275283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_2842_3	chr10	+	1221	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-83	1063	-83	-10	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAGACCAGGTTGTA	1438	False	NA	42	True	ATTAAA	-13	NA	53472964	53484258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28420_96	chr17	+	1327	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-2	335	0	-331	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCGTGCTGTTTAAA	342	False	NA	12	True	AATACA	-28	NA	56266171	56274950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_28421_14	chr17	+	1708	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-50	2	25	2	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGTGTTGGAGTCTG	294	False	NA	6	True	NA	NA	NA	56266123	56275283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_28422_22	chr17	+	1405	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-80	335	-5	-331	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCGTGCTGTTTAAA	264	False	NA	12	True	AATACA	-28	NA	56266093	56274950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
Isoform_28423_4	chr17	+	1884	12	ISM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-2	-2	0	2	intron_retention	FALSE	canonical	3	53	junction_3	5.69035721982866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCACTGGTTCTTGA	3931	False	NA	8	True	AATAAA	-18	NA	56293508	56303883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420
Isoform_28424_43	chr17	+	1753	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	-5	0	-3	0	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3928	False	NA	6	True	AATAAA	-16	NA	56293505	56303881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
Isoform_28425_11	chr17	+	2218	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	-645	128	-645	9	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56315555	56323662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_28427_40	chr17	+	1681	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	12	8	5	-8	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAGGAGTACAG	NA	False	NA	138	True	NA	NA	NA	56316212	56323782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_28428_444	chr17	+	1557	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	16	128	9	9	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56316216	56323662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_2843_3	chr10	+	1189	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-149	1161	46	82	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAATGTGTTATTTTA	1372	False	NA	11	True	TATAAA	-24	NA	53472898	53484160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28430_7	chr17	+	1640	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-3	8	intron_retention	FALSE	canonical	3	665	junction_1	102.378167868928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316204	56323661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_28431_11	chr17	+	1323	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	8	31	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGCAGTTGTTGGGGTT	NA	False	NA	40	True	AATAAA	-40	NA	56316215	56323684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
Isoform_28437_504	chr17	+	3338	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-52	2249	-52	-805	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347386	56375027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_28438_24	chr17	+	3441	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-154	2248	-154	-804	multi-exon	TRUE	canonical	3	392	junction_3	50.5723455079702	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347284	56375028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_28439_10	chr17	+	3083	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-52	-1030	at_least_one_novel_splicesite	FALSE	non_canonical	3	209	junction_1	81.0012597533684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAGGTCTGGAGTCT	NA	False	NA	NA	False	GATAAA	-16	NA	56347386	56374802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_56347464_56347493_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
Isoform_2844_3	chr10	+	1095	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-59	1165	-59	78	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAATGTGTTAT	1462	False	NA	7	True	TATAAA	-20	NA	53472988	53484156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_2845_3	chr10	+	2073	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	117	11	117	-11	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCTCATTTT	1638	False	NA	NA	False	AATAAA	-24	NA	53473164	53485310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
Isoform_28450_222	chr17	+	2275	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	-38	1	23	1	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28452_92	chr17	+	2272	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	148	junction_6	209.929787204092	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_28453_488	chr17	+	2248	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	27	-5	23	1	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28454_100	chr17	+	2271	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	4	-5	0	1	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386637	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28456_266	chr17	+	2245	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	309	junction_15	154.811225547618	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_28459_62	chr17	+	2245	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_6	198.047873000444	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386660	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_2846_12	chr10	+	2118	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	16	6	16	-6	multi-exon	FALSE	canonical	2	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTATAAAGCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55983028	55992970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_55983126_55990949
Isoform_28460_17	chr17	+	2240	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	25	-1	25	1	multi-exon	FALSE	canonical	3	66	junction_6	225.638196136105	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386662	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_28461_15	chr17	+	2817	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-1	intron_retention	FALSE	canonical	3	635	junction_14	77.6569181642918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAACAGCTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	56386660	56407595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28464_15	chr17	+	2380	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	249.767002535474	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56388445	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28465_28	chr17	+	2354	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	208.4942205434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56388444	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
Isoform_28466_14	chr17	+	2350	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	233.26347525682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56388445	56407597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
Isoform_28469_4	chr17	+	1421	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	22	936	22	-936	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCTTGTCACCAAACT	435	False	NA	NA	False	AATAAA	-29	NA	56469498	56480019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56469607_56478706
Isoform_28473_623	chr17	+	3498	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	88	0	9	0	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	508	False	NA	36	True	AATAAA	-20	NA	56610408	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_28474_579	chr17	+	3536	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	50	0	-29	0	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_2848_8	chr10	+	3124	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	-52	-1	-52	1	multi-exon	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAACCTGCATGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	56253373	56266512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_56253615_56263629
Isoform_28482_178	chr17	+	3476	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	7	0	7	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	506	False	NA	36	True	AATAAA	-20	NA	56610406	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_28483_128	chr17	+	3512	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-29	0	-29	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_28486_93	chr17	+	3529	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	3	268	junction_4	539.303830038087	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	468	False	NA	36	True	AATAAA	-20	NA	56610368	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_2849_6	chr10	+	2439	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	-38	2	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362442	57388963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
Isoform_28492_391	chr17	+	3391	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_28497_96	chr17	+	3367	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	35	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	590.514232338011	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_2850_14	chr10	+	2622	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-17	-1	-6	1	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCTTCTCATTGTTG	NA	False	NA	14	True	NA	NA	NA	57362474	57389232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_28501_61	chr17	+	3382	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
Isoform_2851_34	chr10	+	2353	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-17	268	-6	2	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362474	57388963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
Isoform_2853_3	chr10	+	1817	6	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	15	34893	4	1243	5prime_fragment	FALSE	canonical	3	81	junction_2	9.76524449258696	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAAGATGACTTTA	NA	False	NA	NA	False	AAAAAG	-44	NA	58091333	58106528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083
Isoform_28534_5	chr17	+	2080	10	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	-5	819	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	53.4228415567723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAGAAAAAAAAAAA	4892	False	NA	NA	False	NA	NA	NA	56633056	56693938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
Isoform_28535_6	chr17	+	1787	12	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	4	3656	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	48.5541360980855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGGCACCGTGTCCCA	4901	False	NA	NA	False	NA	NA	NA	56633065	56696775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484
Isoform_28536_9	chr17	+	4703	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4894	False	NA	14	True	ATTAAA	-30	NA	56633058	56709866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_28537_29	chr17	+	1969	9	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-15	15926	-3	819	5prime_fragment	FALSE	canonical	3	116	junction_1	20.6321957144653	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAGAAAAAAAAAAA	4894	False	NA	NA	False	NA	NA	NA	56633058	56693938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
Isoform_28538_23	chr17	+	4588	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-9	-2	3	2	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_28540_6	chr17	+	4569	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4897	False	NA	13	True	ATTAAA	-29	NA	56633061	56709865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
Isoform_28543_5	chr17	+	3046	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	150.811876926926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
Isoform_28544_9	chr17	+	3145	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	120.113627231518	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7880	False	NA	35	True	AATAAA	-26	NA	56891876	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_28545_34	chr17	+	3040	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	120.113627231518	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_28551_23	chr17	+	3168	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	29	-75	21	0	multi-exon	FALSE	canonical	3	97	junction_18	119.307543768196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	8006	False	NA	35	True	AATAAA	-26	NA	56892002	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
Isoform_28552_219	chr17	+	3183	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-77	0	0	0	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_28553_19	chr17	+	3295	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-189	0	45	0	multi-exon	TRUE	canonical	3	422	junction_6	66.4862955803675	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7873	False	NA	35	True	AATAAA	-26	NA	56891869	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_28557_10	chr17	+	2606	20	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_6	132.182992439666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
Isoform_28561_7432	chr17	+	386	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	-3	0	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	7432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
Isoform_28562_245	chr17	+	416	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	-30	-3	-30	3	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920385	56921246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
Isoform_28566_121	chr17	+	492	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	31	3	intron_retention	FALSE	canonical	3	9970	junction_2	629.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920446	56921246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56920681_56920906_56921042_56921123
Isoform_28569_16	chr17	+	2690	18	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	149.65172948686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGACTCTTTTGCAC	NA	False	NA	NA	False	ATTAAA	-13	NA	56980378	57018763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_2857_7	chr10	+	1401	2	ISM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	104	24388	104	-10033	5prime_fragment	FALSE	canonical	3	317	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AAAACA	-24	NA	58159391	58236125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_58159510_58234842
Isoform_28570_172	chr17	+	2563	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	2	2	0	-2	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980366	57018762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28572_14	chr17	+	2606	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	-41	2	30	-2	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980323	57018762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28575_629	chr17	+	2362	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	9	2	0	-2	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980366	57018762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28576_73	chr17	+	2500	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-130	3	-66	-3	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980227	57018761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28577_116	chr17	+	2448	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-77	2	-13	-2	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980280	57018762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28579_13	chr17	+	2972	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	-4	intron_retention	FALSE	canonical	3	371	junction_2	28.0978610559304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	56980366	57018760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_2858_25	chr10	+	4218	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	104	5	104	-5	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGTGTTACATATCA	NA	False	NA	5	True	AATAAA	-14	NA	58159391	58260508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
Isoform_28583_15	chr17	+	2269	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	98.1330833145292	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGACTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	56980366	57018762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
Isoform_28589_1330	chr17	+	512	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	45	-12	14	8	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGCTTGCTGCATGA	NA	False	NA	30	True	AATAAA	-30	NA	57024811	57029149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
Isoform_2859_215	chr10	+	1289	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	127	2911	127	-3	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAACAAAAACAAACA	NA	False	NA	NA	False	ATTAAA	-9	NA	58159414	58257602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
Isoform_28590_38	chr17	+	547	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024764	57029137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
Isoform_28591_33	chr17	+	485	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	4	4	0	0	multi-exon	FALSE	canonical	3	181	junction_2	1185.6477835625	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024786	57029137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
Isoform_28593_344	chr17	+	2025	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9244	False	NA	16	True	AATAAA	-17	NA	57071777	57076841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_28594_149	chr17	+	2278	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	-253	0	1	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9244	False	NA	13	True	NA	NA	NA	57071777	57077094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_28595_57	chr17	+	2071	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-46	0	-25	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9198	False	NA	16	True	AATAAA	-17	NA	57071731	57076841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_28596_28	chr17	+	2340	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-62	-253	-41	1	multi-exon	TRUE	canonical	3	220	junction_6	33.8230690505755	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9182	False	NA	13	True	NA	NA	NA	57071715	57077094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_286_129	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
Isoform_28602_10	chr17	+	2350	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	256	junction_2	25.4283306569661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9220	False	NA	16	True	AATAAA	-17	NA	57071753	57076841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_28604_10	chr17	+	2522	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	-25	252	2	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9225	False	NA	16	True	AATAAA	-17	NA	57071758	57076841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
Isoform_2861_10	chr10	+	1404	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	16	2907	16	1	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAACAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	58159303	58257606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
Isoform_28615_4	chr17	+	2977	11	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1654	1368	1628	-1368	internal_fragment	TRUE	canonical	3	15	junction_6	15.5244967712322	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184130	57194536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440
Isoform_28617_13	chr17	+	2337	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1715	-2	1689	2	3prime_fragment	FALSE	canonical	3	15	junction_6	15.5260378474249	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	18	True	ATTAAA	-18	NA	57184191	57195906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
Isoform_28618_15	chr17	+	2292	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1754	4	1728	-4	3prime_fragment	FALSE	canonical	3	15	junction_6	15.5260378474249	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATGGCTCGCACCCCG	NA	False	NA	12	True	ATTAAA	-12	NA	57184230	57195900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
Isoform_2862_8	chr10	+	5309	20	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-29	15675	-27	-15675	5prime_fragment	TRUE	canonical	3	152	junction_18	19.0043004318246	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGGAAATCAAGAGAAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	58282714	58314503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978
Isoform_28620_3	chr17	+	2686	10	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1701	-1368	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	18.3370366630011	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184203	57194536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57192083_57192224_57193440
Isoform_28623_1058	chr17	+	968	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	11	4	11	-4	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTGAAGCACCTTC	NA	False	NA	29	True	ATTAAA	-17	NA	57297315	57303184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_28624_197	chr17	+	995	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297292	57303188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_28625_17	chr17	+	1292	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-312	3	-312	-3	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCTGAAGCACCTTCC	NA	False	NA	30	True	ATTAAA	-18	NA	57296992	57303185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
Isoform_28627_174	chr17	+	733	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	4	180	4	5	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	375	False	NA	9	True	AATAAA	-19	NA	57304346	57306142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
Isoform_28628_11	chr17	+	911	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	7	-1	7	1	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAACAAAAAACCC	378	False	NA	NA	False	NA	NA	NA	57304349	57306323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
Isoform_28629_3	chr17	+	844	3	NIC	ENSMUSG00000002661.15	novel	917	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	443	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	367	False	NA	4	True	AATAAA	-14	NA	57304338	57306137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_57304568_57305388_57305796_57305929
Isoform_2863_8	chr10	+	1837	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	34905	-22	-34905	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAACAAAACAAAAC	921	False	NA	NA	False	NA	NA	NA	58333747	58377161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
Isoform_28630_9	chr17	+	541	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	21	174	17	0	multi-exon	FALSE	canonical	3	32	junction_1	221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	388	False	NA	4	True	AATAAA	-14	NA	57304359	57306137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57304568_57305670_57305796_57305929
Isoform_28631_15	chr17	+	1088	4	ISM	ENSMUSG00000044279.16	ENSMUST00000071826.10	1194	5	3094	-1	-32	1	3prime_fragment	TRUE	canonical	3	14	junction_1	93.9657147876584	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1494	False	NA	NA	False	AATAAA	-26	NA	57369198	57372913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_57369229_57369594_57369767_57370636_57370699_57372089
Isoform_28633_8	chr17	+	3414	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	-2	-2206	-2	2206	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTGTGTGTGTTTAA	1524	False	NA	NA	False	NA	NA	NA	57369228	57375124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
Isoform_28634_173	chr17	+	1159	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	41	6	-11	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1567	False	NA	NA	False	AATAAA	-25	NA	57369271	57372912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
Isoform_28635_64	chr17	+	786	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	-12	4	-12	1	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1566	False	NA	NA	False	AATAAA	-26	NA	57369270	57372913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
Isoform_28637_7	chr17	+	1003	3	NIC	ENSMUSG00000044279.16	novel	1206	4	NA	NA	-26	1	intron_retention	FALSE	canonical	2	7	junction_1	97.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1552	False	NA	NA	False	AATAAA	-26	NA	57369256	57372913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_57369374_57370636_57370699_57372089
Isoform_28638_6	chr17	+	3586	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-24	-2694	-8	2203	multi-exon	FALSE	canonical	3	202	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTTGTGTGTGTGTT	1570	False	NA	NA	False	NA	NA	NA	57369274	57375121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57369767_57370636_57370699_57372089
Isoform_28639_72	chr17	+	1385	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-31	-486	-15	1	multi-exon	FALSE	canonical	3	202	junction_2	10.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGCTGTAAG	1563	False	NA	NA	False	AATAAA	-26	NA	57369267	57372913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57369767_57370636_57370699_57372089
Isoform_2864_14	chr10	+	2477	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-23	1	-23	-1	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTAGAGTCCCTTCTT	920	False	NA	NA	False	AATAAA	-23	NA	58333746	58412065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
Isoform_28641_4	chr17	+	1002	4	NIC	ENSMUSG00000044279.16	novel	778	5	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	51	junction_3	76.6130247122221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAAGATTTTAGCT	1566	False	NA	NA	False	AATAAA	-21	NA	57369270	57372908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_57369767_57370636_57370699_57372089_57372234_57372608
Isoform_28642_5	chr17	+	1306	3	FSM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	-15	-1	-15	1	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCCTTTTATTATTTT	10	False	NA	NA	False	AATAAA	-11	NA	57412309	57414758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57412861_57413249_57413287_57414040
Isoform_28644_133	chr17	+	2002	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	10	4	10	-4	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTCTTGGAGTCTGCA	NA	False	NA	9	True	ATTAAA	-19	NA	57556464	57570423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
Isoform_28645_226	chr17	+	1998	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-17	243	10	-5	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTCTTGGAGTCTGC	NA	False	NA	8	True	ATTAAA	-18	NA	57556464	57570422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
Isoform_28647_6	chr17	+	2214	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	11	-1	-7	1	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCGTGTGGAATAAATGG	NA	False	NA	NA	False	GATAAA	-14	NA	57556492	57570666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
Isoform_2865_18	chr10	+	2625	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	70	1348	2	0	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159187	59207778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_28651_4	chr17	+	2906	27	FSM	ENSMUSG00000034116.18	ENSMUST00000005889.16	2963	27	-22	79	-22	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.18421571679543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCGTGTTCCAGACT	NA	False	NA	NA	False	AATAAA	-14	NA	57586077	57634952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_57586402_57602981_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612378_57612458_57612482_57612662_57612709_57613106_57613244_57614033_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641_57631794_57634650
Isoform_28654_36	chr17	+	2780	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-9	19	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCCTGCCATTTGATAC	NA	False	NA	23	True	AATAAA	-34	NA	64171000	64446211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_28655_6	chr17	+	3062	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTTCCTAGGGTTTC	NA	False	NA	NA	False	TATAAA	-23	NA	64171001	64446494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_28656_29	chr17	+	2771	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-3	19	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCCTGCCATTTGATAC	NA	False	NA	23	True	AATAAA	-34	NA	64171006	64446211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
Isoform_28658_3	chr17	+	4848	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-6	2149	-6	-1877	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGAAAGAAAAATCAGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	64907724	65059956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
Isoform_28659_4	chr17	+	3835	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	9	6	-2	-1	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAGATGGGAGAAAGGC	NA	False	NA	29	True	AATAAA	-26	NA	66090358	66148915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_2866_167	chr10	+	2624	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	0	294	0	1	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCTGTGTGGTATT	NA	False	NA	19	True	NA	NA	NA	59159189	59207779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_28661_3	chr17	+	3786	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-2	0	-2	0	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGGGAGAAAGGCGT	NA	False	NA	31	True	AATAAA	-28	NA	66090358	66148917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_28662_45	chr17	+	3674	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	49	61	-1	5	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACTTTGTTTCCTAAA	NA	False	NA	22	True	AATAAA	-32	NA	66090409	66148856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_28664_8	chr17	+	3737	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	49	-2	-1	2	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGAGAAAGGCGTTT	NA	False	NA	33	True	AATAAA	-30	NA	66090409	66148919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
Isoform_28668_53	chr17	+	1770	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	80	1055	-20	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418619	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28669_13	chr17	+	2881	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	17	7	9	-7	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCAACTTGCTTCTTG	NA	False	NA	-4	True	NA	NA	NA	66418556	66427491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_2867_18	chr10	+	2745	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-121	294	-49	1	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCTGTGTGGTATT	NA	False	NA	19	True	NA	NA	NA	59159068	59207779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_28670_13	chr17	+	2826	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	80	-1	-20	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	4	True	NA	NA	NA	66418619	66427499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28671_30	chr17	+	1821	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	29	1055	21	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418568	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28675_4	chr17	+	1946	10	ISM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	3	-1	3	1	intron_retention	FALSE	canonical	0	0	junction_1	41.6333199893227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418642	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
Isoform_28676_174	chr17	+	1817	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	15	-1	7	1	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418654	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28677_37	chr17	+	2877	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	11	-1057	3	1	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	4	True	NA	NA	NA	66418650	66427499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28678_12	chr17	+	1868	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-36	-1	-36	1	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418603	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_2868_10	chr10	+	2999	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-2	-79	2	79	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	59159187	59208152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
Isoform_28682_9	chr17	+	1965	11	NIC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	29	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.5182236442885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418676	66426443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_66418897_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
Isoform_28686_16	chr17	+	4179	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-46	8	-4	-1	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAACTTCATGATCAA	NA	False	NA	20	True	ATTAAA	-15	NA	66430561	66459161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_28688_48	chr17	+	3483	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-66	724	-9	61	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTTTTTC	NA	False	NA	3	True	NA	NA	NA	66430541	66458445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
Isoform_28689_4	chr17	+	2855	18	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	105716	6	-9431	-6	3prime_fragment	FALSE	canonical	3	171	junction_2	25.8207823810234	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68109969	68129636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
Isoform_28691_4	chr17	+	1856	11	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	113181	11	-1966	-11	3prime_fragment	FALSE	canonical	3	215	junction_5	13.3865604245452	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTGGAATTAATGGTC	NA	False	NA	11	True	ATTAAA	-11	NA	68117434	68129631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
Isoform_28692_4	chr17	+	1778	10	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	114204	4	-943	-4	3prime_fragment	FALSE	canonical	3	215	junction_4	14.0405057768278	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTAATGGTCTCCTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	68118457	68129638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
Isoform_28693_5	chr17	+	3930	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	-80	-662	-13	1	multi-exon	TRUE	canonical	3	30	junction_19	11.3154222706638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463759	69596981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
Isoform_28694_6	chr17	+	3869	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	-22	-659	13	-2	multi-exon	FALSE	canonical	3	30	junction_19	11.3154222706638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTCTCGTCTTCCA	NA	False	NA	14	True	AATAAA	-15	NA	69463817	69596978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
Isoform_28695_13	chr17	+	3764	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTCTCGTCTTCCA	NA	False	NA	14	True	AATAAA	-15	NA	69463805	69596978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_28696_5	chr17	+	2927	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	5	19	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCTCCTTTTTCA	NA	False	NA	NA	False	ATTAAA	-39	NA	69463777	69596113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_28697_5	chr17	+	3741	19	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	13.0085442007252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	16	True	AATAAA	-17	NA	69463776	69596980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
Isoform_28701_13	chr17	+	3578	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-43	208	-43	-208	multi-exon	FALSE	canonical	3	85	junction_1	58	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTTCTTGATCATT	NA	False	NA	NA	False	TATAAA	-14	NA	69690001	69697537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69690265_69692415_69692500_69694306
Isoform_28704_23	chr17	+	3355	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	64	206	64	-206	multi-exon	FALSE	canonical	3	64	junction_1	68.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690377	69697539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69690416_69692415_69692500_69694306
Isoform_28706_3	chr17	+	3628	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	3	-6	3	6	multi-exon	FALSE	canonical	3	64	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGTGTTATAACT	NA	False	NA	NA	False	NA	NA	NA	69690316	69697751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69690416_69692415_69692500_69694306
Isoform_28709_9	chr17	+	3781	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-78	655	-78	-206	multi-exon	FALSE	canonical	3	41	junction_1	80	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690756	69697539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69691221_69692415_69692500_69694306
Isoform_28713_7	chr17	+	433	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-34	-14	-34	14	multi-exon	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGATGTTCTGGATA	246	False	NA	10	True	ATTAAA	-22	NA	71141624	71143053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71141798_71142793
Isoform_28714_4	chr17	+	552	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-25	-142	-25	142	multi-exon	FALSE	canonical	3	64	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTCTATCTTTTTTTT	255	False	NA	138	True	AATACA	-14	NA	71141633	71143181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71141798_71142793
Isoform_28717_6	chr17	+	4138	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-5	-18	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	71490545	71555219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
Isoform_28720_3	chr17	+	5726	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	71490551	71556813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
Isoform_28726_325	chr17	+	2272	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	33	1145	33	-92	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACACACTTTCTGCAA	NA	False	NA	8	True	AATAAA	-13	NA	71923242	71964881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
Isoform_28727_300	chr17	+	3409	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	37	4	37	-4	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGCGTGTCTCGTGGTG	NA	False	NA	14	True	AATAAA	-14	NA	71923246	71966022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
Isoform_28728_27	chr17	+	3486	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	-35	-1	-35	1	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTCTCGTGGTGTATAT	NA	False	NA	19	True	AATAAA	-19	NA	71923174	71966027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
Isoform_2873_231	chr10	+	2316	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	122	4	0	-2	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGAGCTCTGTGTCCTTT	NA	False	NA	23	True	NA	NA	NA	59538420	59699950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
Isoform_28734_35	chr17	+	2301	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	4	1145	4	-92	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGACACACTTTCTGCAA	NA	False	NA	8	True	AATAAA	-13	NA	71923213	71964881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
Isoform_28735_32	chr17	+	2116	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	751	253	7	multi-exon	FALSE	canonical	3	244	junction_1	49	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTGCTACTTATTTTC	998	False	NA	15	True	AATAAA	-24	NA	73143700	73157439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_28736_20	chr17	+	2163	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	205	752	205	6	multi-exon	FALSE	canonical	3	244	junction_1	49	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGCTACTTATTTT	950	False	NA	14	True	AATAAA	-23	NA	73143652	73157438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_28737_67	chr17	+	1179	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	1688	253	673	multi-exon	FALSE	canonical	3	244	junction_1	49	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	998	False	NA	13	True	AATAAA	-13	NA	73143700	73156502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_28738_30	chr17	+	1199	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	231	1690	231	671	multi-exon	FALSE	canonical	3	244	junction_1	49	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGGTCCTCTGTTA	976	False	NA	11	True	AATAAA	-11	NA	73143678	73156500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73143787_73153273_73153439_73155574
Isoform_2874_6	chr10	+	1510	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAAGCCTGGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	59715424	59732597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
Isoform_28740_23	chr17	+	2155	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	269	-5	46	5	multi-exon	FALSE	canonical	3	101	junction_1	120.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACTGCTACTTATTT	1874	False	NA	13	True	AATAAA	-22	NA	73144576	73157437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_28741_34	chr17	+	1182	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	307	930	84	673	multi-exon	FALSE	canonical	3	101	junction_1	120.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1912	False	NA	13	True	AATAAA	-13	NA	73144614	73156502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_28742_3	chr17	+	1533	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	-48	934	-48	669	multi-exon	FALSE	canonical	3	101	junction_1	120.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTTTGGTCCTCTGT	1557	False	NA	9	True	AATAAA	-9	NA	73144259	73156498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73144704_73153273_73153439_73155574
Isoform_28743_3	chr17	+	2239	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	72	-1607	72	4	multi-exon	FALSE	canonical	3	29	junction_1	156.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAACTGCTACTTATT	1900	False	NA	12	True	AATAAA	-21	NA	73144602	73157436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73144815_73153273_73153439_73155574
Isoform_28744_7	chr17	+	1321	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	56	-673	56	673	multi-exon	FALSE	canonical	3	29	junction_1	156.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1884	False	NA	13	True	AATAAA	-13	NA	73144586	73156502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73144815_73153273_73153439_73155574
Isoform_28745_5	chr17	+	690	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	1	2378	1	224	multi-exon	FALSE	canonical	2	4	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCACCGAGTCGGTT	NA	False	NA	NA	False	NA	NA	NA	73225300	73246564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_73225574_73228182_73228286_73246250
Isoform_28746_11	chr17	+	4396	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	47	-3	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTGATTCTGTT	NA	False	NA	13	True	AATAAA	-23	NA	73415035	73550360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_28747_3	chr17	+	1413	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	14	-22	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTATGGGGGAAATA	NA	False	NA	NA	False	NA	NA	NA	73415002	73547344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
Isoform_28748_8	chr17	+	1904	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	136	2632	13	-3	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	10003	False	NA	13	True	AATAAA	-17	NA	74646143	74695478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_28749_7	chr17	+	2184	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-119	1	-119	-1	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTCAAGGCCTTCT	9722	False	NA	15	True	AATAAA	-19	NA	74645862	74695480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_2875_9	chr10	+	3009	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	27	5	8	1	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGGTGGGTCTGCAT	NA	False	NA	32	True	NA	NA	NA	59715404	59735119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
Isoform_28750_9	chr17	+	1918	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	147	1	-2	-1	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTCAAGGCCTTCT	9988	False	NA	15	True	AATAAA	-19	NA	74646128	74695480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
Isoform_28752_21	chr17	+	2146	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	-11	0	11	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGTAGTATATTTGTATAC	NA	False	NA	NA	False	AATAAA	-34	NA	74702615	74731227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_28753_55	chr17	+	1567	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	24	557	2	-2	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCTTGTGGCAGTGA	NA	False	NA	11	True	TATAAA	-14	NA	74702626	74730659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_28754_3	chr17	+	2217	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	4	-73	4	73	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCATGGTTCCCAGTGT	NA	False	NA	NA	False	AATAGA	-20	NA	74702606	74731289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
Isoform_28758_11	chr17	+	2038	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	-5	100	-5	-100	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTATTATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	74796482	74807172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_28759_41	chr17	+	1818	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	12	303	12	14	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTGTCCTATATTACT	NA	False	NA	19	True	AATAAA	-31	NA	74796499	74806969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_28761_5	chr17	+	2075	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	14	44	14	-44	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTATGACATCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	74796501	74807228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
Isoform_28763_5	chr17	+	2788	9	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-113	122030	60	13504	5prime_fragment	FALSE	canonical	3	29	junction_5	4.78114787472632	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTGAAAGAGAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	74835349	74887348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159
Isoform_28764_3	chr17	+	1868	10	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	125848	13025	11	7900	internal_fragment	FALSE	canonical	3	23	junction_9	5.21630870858022	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCCAGTAGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	74961394	74996353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212
Isoform_28765_136	chr17	+	2810	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	28	0	-2	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024754	75170565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
Isoform_28767_32	chr17	+	2805	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	-150	-4	0	0	multi-exon	FALSE	canonical	3	41	junction_19	29.4919116570221	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024756	75170565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
Isoform_28768_3	chr17	+	2670	19	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	36.8121692171099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTATTTTGTGATG	NA	False	NA	4	True	AATAAA	-15	NA	75024747	75170559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
Isoform_28771_13	chr17	+	878	8	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-52	6140	-30	2965	5prime_fragment	FALSE	canonical	3	101	junction_6	14.3697528134052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAGGAAGAGGAAAAGG	8800	False	NA	NA	False	NA	NA	NA	79142965	79149597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541
Isoform_28772_4	chr17	+	1117	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-52	3069	-30	-119	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGGCCTTTGTATAGC	8800	False	NA	9	True	AATAAA	-25	NA	79142965	79152668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
Isoform_28773_39	chr17	+	1202	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-14	2946	8	4	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGATGTGGCATTGTGA	8838	False	NA	12	True	AATACA	-24	NA	79143003	79152791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
Isoform_28774_133	chr17	+	598	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	2	2	2	-2	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTGTGGGTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	79223930	79227733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_28776_34	chr17	+	753	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTGTGGGTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	79223943	79227733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_28779_9	chr17	+	931	5	NIC	ENSMUSG00000062691.11	novel	443	2	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	686.839500902503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACGTGTGTGGGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	79224131	79227732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_79224490_79225785_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_28780_133	chr17	+	576	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1838	2	1655	-2	3prime_fragment	FALSE	canonical	3	1564	junction_2	26.0298973404728	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTGTGGGTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	79225783	79227733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_28781_8	chr17	+	1320	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1838	-742	1655	742	3prime_fragment	FALSE	canonical	3	1564	junction_2	26.0298973404728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGTTTTGAATCTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	79225783	79228477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
Isoform_28783_3	chr17	+	704	2	FSM	ENSMUSG00000024082.6	ENSMUST00000233138.2	514	2	-15	-175	-4	175	multi-exon	FALSE	canonical	3	397	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCACTGG	NA	False	NA	NA	False	AAGAAA	-21	NA	79244572	79245565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79244631_79244919
Isoform_28784_129	chr17	+	1412	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	3	334	2	-8	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATAAGTTTTCAAACTA	NA	False	NA	16	True	AATAAA	-25	NA	79244567	79254594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_28785_4	chr17	+	2295	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	5	-551	4	-2	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAAGTTGTCTGTAGA	NA	False	NA	NA	False	GATAAA	-17	NA	79244569	79255479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_28786_16	chr17	+	1476	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	3	270	2	56	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCATGCCTTTAA	NA	False	NA	80	True	AATAAA	-23	NA	79244567	79254658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_28788_4	chr17	+	1768	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	0	-19	0	19	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACTGTATTTCTATTTG	NA	False	NA	NA	False	AGTAAA	-31	NA	79244564	79254947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
Isoform_28789_3	chr17	+	1797	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	266	-4	-16	4	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACTATTGCCTCTTTG	NA	False	NA	2	True	AATATA	-18	NA	79359600	79397811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_2879_8	chr10	+	1972	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	28	1070	-15	212	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCCAGGCTTATGGT	NA	False	NA	7	True	TATAAA	-18	NA	59715424	59734048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
Isoform_28790_14	chr17	+	1711	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	354	-6	72	6	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTATTGCCTCTTTGTT	NA	False	NA	4	True	AATATA	-20	NA	79359688	79397813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_28791_58	chr17	+	1571	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	354	134	72	23	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGAAAGTGTCTGTT	NA	False	NA	34	True	ATTAAA	-43	NA	79359688	79397673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_28793_6	chr17	+	1641	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	269	149	-13	8	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTCATGTCCATAAAT	NA	False	NA	19	True	ATTAAA	-28	NA	79359603	79397658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_28795_4	chr17	+	1442	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	27	4	27	-4	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGTGAATTTATTTTC	NA	False	NA	7	True	ATTAAA	-16	NA	79359643	79397646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
Isoform_28796_124	chr17	+	2320	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	-8	2	-8	-2	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGACTCTTGTTCTTT	NA	False	NA	9	True	AATAAA	-17	NA	80434891	80492528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
Isoform_288_223	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_2006_6057
Isoform_28802_3	chr17	+	773	2	ISM	ENSMUSG00000055760.13	ENSMUST00000156869.2	668	3	41	614	41	-614	5prime_fragment	FALSE	canonical	3	317	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTGTCTCAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	80531910	80533633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_80532100_80533049
Isoform_28803_91	chr17	+	1068	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	35	31	35	-31	multi-exon	FALSE	canonical	3	317	junction_1	34	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAAATCCGTTTCGGG	NA	False	NA	8	True	AATAAA	-27	NA	80531904	80535895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_80532100_80533049_80533194_80535166
Isoform_28806_26	chr17	+	624	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	23	-3	23	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	False	NA	15	True	AATAAA	-18	NA	80597663	80604905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
Isoform_28811_10	chr17	+	5425	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	17	-1	17	1	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658376	83787787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_28813_15	chr17	+	5397	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-272	-2191	12	1	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658371	83787787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_28815_5	chr17	+	5306	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-38	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658321	83787787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_28819_19	chr17	+	5253	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-78	-94	-18	1	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658341	83787787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_2882_4	chr10	+	3040	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	28	2	-15	-2	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGCAGTGGTGGGTCTG	NA	False	NA	29	True	NA	NA	NA	59715424	59735116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
Isoform_28821_6	chr17	+	5114	22	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	112.735940543597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658384	83787787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_28823_7	chr17	+	5072	21	FSM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	-18	-2	-18	0	multi-exon	FALSE	canonical	3	67	junction_3	95.8126296476618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTTCCTTTGCCTTT	NA	False	NA	12	True	GATAAA	-15	NA	83658392	83787786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
Isoform_28824_83	chr17	+	1730	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	-4	2	-4	0	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTGTTTTTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	84013587	84100302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
Isoform_28826_173	chr17	+	1726	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	1	-4	1	2	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	14	True	AATAAA	-19	NA	84013592	84100306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
Isoform_28827_273	chr17	+	1666	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	61	-4	33	2	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	14	True	AATAAA	-19	NA	84013652	84100306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
Isoform_2883_103	chr10	+	1444	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	6	0	6	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838666	59935808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_28834_32	chr17	+	1370	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	-21	5	-21	-5	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAACATCTAAGTATAA	NA	False	NA	11	True	AATAAA	-19	NA	84933902	84963011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
Isoform_28835_361	chr17	+	2587	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	2	81	2	-81	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCTCAGTTTCCACTT	NA	False	NA	21	True	AATAAA	-31	NA	85265428	85322038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_28836_60	chr17	+	2666	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	2	2	2	-2	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCACACTTTGGCTC	NA	False	NA	4	True	AATAAA	-20	NA	85265428	85322117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_28837_24	chr17	+	2752	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	4	-86	4	86	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATGTAGTTCTGCTG	NA	False	NA	92	True	ATTAAA	-28	NA	85265430	85322205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
Isoform_28838_183	chr17	+	3256	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-8	75	2	-75	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTGTGACATATTACT	NA	False	NA	24	True	AATAAA	-13	NA	85265428	85324550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
Isoform_2884_6	chr10	+	1346	10	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	69.3265666213622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838666	59935808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_28841_11	chr17	+	3330	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-8	1	2	-1	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGGCATACTTGTGG	NA	False	NA	18	True	AATAAA	-30	NA	85265428	85324624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
Isoform_28842_7	chr17	+	1722	7	NIC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	2	9	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	715.729639365778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAACGA	NA	False	NA	26	True	NA	NA	NA	85265428	85331255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
Isoform_28844_11	chr17	+	1674	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-375	-9	2	9	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAACGA	NA	False	NA	26	True	NA	NA	NA	85265428	85331255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
Isoform_28845_11	chr17	+	1839	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-375	-174	2	1	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGGTTTTATTCCAG	NA	False	NA	12	True	AATAAA	-20	NA	85265428	85331420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
Isoform_28846_27	chr17	+	1521	11	FSM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	74	0	20	0	multi-exon	TRUE	canonical	3	62	junction_6	13.9484766193302	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2247	False	NA	10	True	AATAAA	-26	NA	85398053	85766016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
Isoform_28848_3	chr17	+	1405	10	NIC	ENSMUSG00000071037.7	novel	1595	11	NA	NA	61	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	26.2805377925694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2288	False	NA	10	True	AATAAA	-26	NA	85398094	85766016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85746954_85747019_85759623_85759756_85765489
Isoform_28849_6	chr17	+	2702	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	33	-37804	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAAAGTA	2260	False	NA	NA	False	NA	NA	NA	85398066	85436132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
Isoform_28850_11	chr17	+	3426	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-2	2092	-2	-2092	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTACCGTTGATGA	NA	False	NA	NA	False	AATACA	-16	NA	87061125	87138746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
Isoform_28853_86	chr17	+	1166	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	0	18	0	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87332995	87343238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
Isoform_28854_4	chr17	+	1481	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	-315	18	315	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	87332995	87343553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
Isoform_2886_7	chr10	+	1556	11	FSM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	-87	4	-87	-2	multi-exon	FALSE	canonical	3	28	junction_1	64.3808201252516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGCTGTGGTCTGTG	NA	False	NA	24	True	AATAAA	-14	NA	59839061	59935806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59839239_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_28860_17	chr17	+	3418	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-56	-2384	-44	-1213	multi-exon	FALSE	canonical	3	48	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCCGTTTTATACA	NA	False	NA	5	True	AATAAA	-19	NA	87415062	87444054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87415476_87441049
Isoform_28862_17	chr17	+	4605	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	9	0	2	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590322	87689197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
Isoform_28864_4	chr17	+	4629	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	-14	-1	-14	1	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGTCCAGTTACTTG	NA	False	NA	14	True	AATAAA	-29	NA	87590299	87689198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
Isoform_28865_3	chr17	+	1334	9	NIC	ENSMUSG00000045394.10	novel	2040	10	NA	NA	-108	-206	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	74.4512214473342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTCTAAGTTTGTTT	NA	False	NA	23	True	AATAAA	-31	NA	87944001	87958328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_87944033_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_28869_100	chr17	+	1519	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-5	231	-5	-208	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTTTCTAAGTTTGT	NA	False	NA	21	True	AATAAA	-29	NA	87944104	87958326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_2887_3	chr10	+	4402	5	ISM	ENSMUSG00000058297.17	ENSMUST00000121820.9	5238	11	19930	3	19681	-3	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGCTGAGAAACCTTT	NA	False	NA	1	True	AATAAA	-14	NA	59961970	59971017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
Isoform_28870_14	chr17	+	1778	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-31	-2	-31	2	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGGGTAAGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	87944078	87958559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_28873_3	chr17	+	1622	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-108	231	-108	-208	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTTTCTAAGTTTGT	NA	False	NA	21	True	AATAAA	-29	NA	87944001	87958326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
Isoform_28882_1629	chr17	+	3050	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	233	0	2	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4894	False	NA	19	True	AATAAA	-16	NA	87979990	88031141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
Isoform_28883_230	chr17	+	3090	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	193	0	-17	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4854	False	NA	19	True	AATAAA	-16	NA	87979950	88031141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
Isoform_2890_1373	chr10	+	2624	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	26	-4	25	1	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	1373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	7015	False	NA	NA	False	AATAAA	-17	NA	60113474	60138377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
Isoform_28907_1488	chr17	+	4242	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	1	8	1	-8	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	NA	False	NA	23	True	AATAAA	-12	NA	88282490	88298312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
Isoform_28908_184	chr17	+	4274	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	-31	8	-31	-8	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	NA	False	NA	23	True	AATAAA	-12	NA	88282458	88298312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
Isoform_28932_8	chr17	+	2926	3	FSM	ENSMUSG00000034998.19	ENSMUST00000134107.2	2892	3	-32	-2	-9	2	multi-exon	FALSE	canonical	3	279	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	88748153	88785499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88748313_88770140_88770692_88783283
Isoform_28933_42	chr17	+	5069	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	15	1	-9	-1	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTTTGTTATTTGTGA	NA	False	NA	14	True	AATAAA	-18	NA	88748153	88797960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
Isoform_28936_52	chr17	+	3029	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	111	1	13	-1	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCGGTCTGTGACAGT	NA	False	NA	15	True	AATAAA	-16	NA	88837656	88895794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_28938_7	chr17	+	3152	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	-13	2	-13	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCGGTCTGTGACAG	NA	False	NA	14	True	AATAAA	-15	NA	88837532	88895793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_28939_4	chr17	+	1603	9	FSM	ENSMUSG00000024154.12	ENSMUST00000024970.11	1621	9	17	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACACATTTACAACATAG	NA	False	NA	NA	False	AATAAA	-18	NA	88976104	89022579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_88976160_88978621_88978724_88978926_88979048_88997414_88997471_88999145_88999231_89001530_89002097_89018868_89019127_89019783_89019874_89022309
Isoform_28940_5	chr17	+	1279	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	48.1350979465191	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTGGGTGTCCCCTC	NA	False	NA	NA	False	AATAAA	-10	NA	95057543	95082556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
Isoform_28941_3	chr17	+	1156	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	47.0790558528949	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTCCCCTCCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	95057543	95082561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
Isoform_28942_25	chr17	+	450	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
Isoform_28943_19	chr17	+	355	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
Isoform_28944_4	chr17	+	370	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	77.6831169989121	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95101454
Isoform_28945_11	chr17	+	490	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-8	2597	-8	668	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATGCAATCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	95172337	95183152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
Isoform_28946_33	chr17	+	2282	2	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15658	1793	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004405	29027075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_29004515_29024902
Isoform_28948_7	chr17	+	5638	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15698	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	73.5222471999689	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004365	29057515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
Isoform_28949_56	chr17	+	1066	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	41	-31	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	120	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAAATCCGTTTCGGG	NA	False	NA	8	True	AATAAA	-27	NA	80531910	80535895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_80532104_80533049_80533194_80535166
Isoform_28951_16	chr17	+	1064	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	428.054669405673	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACATGAACGTCTGTGT	NA	False	NA	19	True	AATAAA	-27	NA	48717033	48724292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48717123_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28952_19	chr17	+	1060	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTGCACACATGAACG	NA	False	NA	12	True	AATAAA	-20	NA	48717033	48724285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
Isoform_28954_25	chr17	+	868	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11918	3	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTCTGACTTAAATTTC	NA	False	NA	16	True	NA	NA	NA	34112190	34125652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_34112309_34124501_34124892_34125292
Isoform_28955_21	chr17	+	845	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892589	23894198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
Isoform_28956_6	chr17	+	2025	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105727	25111122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_28957_12	chr17	+	1915	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	105	1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105837	25111122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_28960_5	chr17	+	4171	6	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3091	0	intron_retention	FALSE	canonical	0	0	junction_4	435.247791493535	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6350968	6358589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
Isoform_28961_4	chr17	-	3440	7	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3037	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	406.231871390384	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6713457	6705924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
Isoform_28962_5	chr17	+	2684	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.8747549010185	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3195	False	NA	8	True	AATAAA	-14	NA	34148516	34156657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_34148613_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_28965_6	chr17	+	1129	3	NNC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	-7544	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCCCTTGCCAGTGTCT	5187	False	NA	NA	False	AATAAA	-14	NA	35405870	35415280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35406083_35414025_35414342_35414679
Isoform_28966_3	chr17	+	1334	2	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19787	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAGAAAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	43347245	43349619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_43347446_43348485
Isoform_28968_7	chr17	+	599	3	NNC	ENSMUSG00000023939.8	novel	510	2	NA	NA	-78	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	542	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	36	True	AATAAA	-25	NA	46006263	46009420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_46006325_46006407_46006499_46008973
Isoform_28969_7	chr17	+	630	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5798	-2	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCCTGTTGAGTCAT	NA	False	NA	14	True	AATAAA	-14	NA	48043566	48045405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
Isoform_28970_4	chr17	+	2036	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	70.7248188403477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	25105703	25111120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_25106220_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_28973_3	chr17	+	3132	22	NNC	ENSMUSG00000034709.9	novel	1112	5	NA	NA	-20305	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4483098427585	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAACTTTTCGGTCTGTG	NA	False	NA	10	True	AATAAA	-11	NA	88817240	88895789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_88817439_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
Isoform_28974_5	chr17	+	1489	3	NNC	ENSMUSG00000039269.6	novel	1290	2	NA	NA	-3384	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCGATTTCTCTCCGC	25	False	NA	NA	False	AATAAA	-14	NA	35874962	35879840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35875226_35878401_35878518_35878730
Isoform_28980_6	chr17	+	4684	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-21	5	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	37.9476942646059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGAATTGTATTTTTT	9695	False	NA	16	True	AATAAA	-23	NA	3165502	3249139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_28981_6	chr17	+	4940	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	37.9476942646059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCTAGGAATTGTA	9433	False	NA	10	True	AATAAA	-17	NA	3165240	3249133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_28982_28	chr17	+	4877	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-12	1	-5	-1	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCTAGGAATTGTA	9434	False	NA	10	True	AATAAA	-17	NA	3165241	3249133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_28985_7	chr17	+	4772	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59408	combination_of_known_splicesites	FALSE	canonical	3	64	junction_20	27.9703414351702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9434	False	NA	68	True	NA	NA	NA	3165241	3308542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
Isoform_28987_6	chr17	+	4872	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	33.7657729635013	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9434	False	NA	8	True	AATAAA	-15	NA	3165241	3249131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
Isoform_28988_4	chr17	+	4779	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-15	59408	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_7	37.0789360688788	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9424	False	NA	68	True	NA	NA	NA	3165231	3308542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
Isoform_28992_101	chr17	+	2394	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	18	919	-5	-919	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATAACTCTTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	5891621	5981310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_28993_86	chr17	+	3316	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	17	-2	-6	2	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	5891620	5982231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_28995_4	chr17	+	3445	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-118	4	-118	-4	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTACAGCAGATTCCCAA	NA	False	NA	NA	False	AATAAA	-13	NA	5891485	5982225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_28996_15	chr17	+	2494	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-76	913	-76	-913	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTCTTTCAGTCCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	5891527	5981316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_28998_6	chr17	+	2527	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-117	921	-117	-921	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTATAACTCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5891486	5981308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_28999_4	chr17	+	3394	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-64	1	-64	-1	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCAGATTCCCAAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	5891539	5982228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
Isoform_29001_12	chr17	+	2775	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	63	-593	12	593	multi-exon	FALSE	canonical	3	932	junction_1	74.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAACAAGATGAGAT	1753	False	NA	NA	False	NA	NA	NA	6130123	6137385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_29002_126	chr17	+	788	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1408	-2	-23	multi-exon	FALSE	canonical	3	932	junction_1	74.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGGAGTTTGGTTA	1739	False	NA	6	True	ATTAAA	-10	NA	6130109	6135384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_29003_173	chr17	+	510	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	49	1686	-2	-301	multi-exon	FALSE	canonical	3	932	junction_1	74.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACTTTAGCTGCAATT	1739	False	NA	28	True	ATTAAA	-18	NA	6130109	6135106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6130187_6131076_6131150_6134746
Isoform_29007_4	chr17	+	4429	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	70	0	-20	0	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307204	6358589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
Isoform_2901_20	chr10	+	812	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-21	-2	7	2	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTCTAGAACCTTCTT	NA	False	NA	8	True	AATAAA	-19	NA	60925116	60930105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
Isoform_29015_8	chr17	+	5133	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-5	2	-5	-2	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320739	6358587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
Isoform_29016_45	chr17	+	4403	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-5	7	-5	-7	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320739	6358582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
Isoform_2902_110	chr10	+	1779	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	316	0	316	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61254066	61261117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61254275_61258760_61259477_61260262
Isoform_29023_29	chr17	+	1782	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320739	6358589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
Isoform_29026_4	chr17	+	4747	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGACTTTTTGTTGCT	NA	False	NA	37	True	AATAAA	-20	NA	6320739	6358588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
Isoform_2903_8	chr10	+	1834	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	261	0	261	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61254011	61261117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61254275_61258760_61259477_61260262
Isoform_29034_1411	chr17	+	697	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	8	66	-8	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	1411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6697576	6703687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
Isoform_29039_4	chr17	-	4120	3	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-392800	-2558	intron_retention	FALSE	canonical	3	556	junction_2	3288.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6760575	6360826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_6361219_6361567_6365234_6760513
Isoform_2904_22	chr10	+	3195	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	21	0	21	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1795	False	NA	3	True	AATAAA	-20	NA	61311600	61418570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
Isoform_29045_1915	chr17	+	697	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	105	1787	-16	343	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	1915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAAGTTTTTGTGTTC	NA	False	NA	NA	False	AATAAA	-8	NA	6869174	6875291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
Isoform_29052_3	chr17	+	2778	17	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.7076940712866	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCCAGCATTTATTAACA	NA	False	NA	11	True	AATAAA	-20	NA	6930419	7005448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001421_7001548_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_29053_23	chr17	+	2651	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCCAGCATTTATTAAC	NA	False	NA	10	True	AATAAA	-19	NA	6930419	7005447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
Isoform_29056_5	chr17	+	1203	10	NNC	ENSMUSG00000094724.9	novel	2448	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	330.475228335211	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTTGGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-8	NA	7246303	7265586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7260468_7260710_7262027_7262074_7263832_7263908_7265296
Isoform_29057_4	chr17	+	1242	9	NIC	ENSMUSG00000023809.11	novel	924	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	62.6178888178131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCATTTCTCGAA	NA	False	NA	NA	False	AATAAA	-18	NA	7437527	7526788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7526509
Isoform_29058_3	chr17	+	1510	10	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	37	40689	25	-13	5prime_fragment	FALSE	canonical	3	167	junction_7	9.98888270918113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7437550	7530025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526
Isoform_29059_21	chr17	+	2373	17	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	12	9996	0	7283	5prime_fragment	FALSE	canonical	3	158	junction_15	12.7174830450054	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTGAAAGAGTCATTCA	NA	False	NA	NA	False	NA	NA	NA	7437525	7560718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144
Isoform_29060_4	chr17	+	2296	19	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-9	7064	-9	-7064	5prime_fragment	FALSE	canonical	3	158	junction_15	13.1946491212195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGACTCCTGCATT	NA	False	NA	NA	False	TATAAA	-17	NA	7437504	7563650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413
Isoform_29061_81	chr17	+	5393	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	12	1	0	-1	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTGGGATAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	7437525	7570713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
Isoform_29062_16	chr17	+	2797	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-12	2621	-12	-2621	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACGTGTCCCACTGTCT	NA	False	NA	NA	False	NA	NA	NA	7437501	7568093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
Isoform_29069_21	chr17	+	1511	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	334	344	-8	-24	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	ACTAAA	-40	NA	8164818	8198312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
Isoform_29072_7	chr17	+	1160	7	FSM	ENSMUSG00000069135.12	ENSMUST00000162586.2	1159	7	2	-3	2	3	multi-exon	FALSE	canonical	3	66	junction_6	120.467146282019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	8384353	8394916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350
Isoform_29073_8	chr17	+	3155	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	21	329	2	0	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384353	8415307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_29075_34	chr17	+	3038	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	41	-2	41	2	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384412	8415309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_29076_23	chr17	+	3099	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-20	-2	0	2	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384351	8415309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_29078_5	chr17	+	2346	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-45	776	-6	754	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCATGGTGAGTGAGTG	NA	False	NA	NA	False	ATTAAA	-38	NA	8384326	8414531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
Isoform_2908_531	chr10	+	1348	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	14	2	14	-2	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTTAGGATAGTTT	2066	False	NA	13	True	AATAAA	-14	NA	61484344	61509945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
Isoform_29083_8	chr17	+	984	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	-38	-391	18	1	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2173	False	NA	5	True	AATAAA	-19	NA	8502645	8516494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
Isoform_29084_343	chr17	+	904	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2172	False	NA	5	True	AATAAA	-19	NA	8502644	8516494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
Isoform_29087_77	chr17	+	991	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	57	1	-10	1	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCTGGATCAACTGT	2980	False	NA	NA	False	AATAAA	-18	NA	8529990	8546273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_29088_47	chr17	+	1034	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	14	1	-6	1	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCTGGATCAACTGT	2937	False	NA	NA	False	AATAAA	-18	NA	8529947	8546273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_29089_11	chr17	+	820	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2980	False	NA	NA	False	AATAAA	-17	NA	8529990	8546272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
Isoform_2909_1325	chr10	+	1295	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	67	2	-2	-2	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTTAGGATAGTTT	2119	False	NA	13	True	AATAAA	-14	NA	61484397	61509945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
Isoform_29090_15	chr17	+	2194	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653104	8661323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
Isoform_29091_34	chr17	+	2190	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	-149	5	-149	-5	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653105	8661323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
Isoform_29092_5	chr17	+	2691	7	FSM	ENSMUSG00000062327.11	ENSMUST00000177118.2	761	7	-1181	-749	-193	-5	multi-exon	FALSE	canonical	3	13	junction_4	10.7496769977314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653061	8661323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
Isoform_29093_3	chr17	+	2645	7	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-5	intron_retention	FALSE	canonical	3	22	junction_4	8.29491142541954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653104	8661323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
Isoform_29094_3	chr17	+	1817	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	99	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12337689	12438528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_29095_10	chr17	+	541	2	ISM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	8	67537	8	12453	5prime_fragment	FALSE	canonical	3	227	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12338178	12370995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_12338303_12370578
Isoform_29096_66	chr17	+	1880	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	31	4	-14	-4	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338201	12438528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_29097_6	chr17	+	1614	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	9	292	9	100	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	12338179	12438240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
Isoform_29101_2744	chr17	+	1920	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	16	510	16	1	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGTTCCTGTCCTC	NA	False	NA	0	True	ATTAAA	-15	NA	13135284	13143444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_29103_143	chr17	+	2425	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	60	-39	0	39	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGCTGTCTTT	NA	False	NA	7	True	NA	NA	NA	13135328	13143993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_29111_44	chr17	+	1766	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	136	0	-10	0	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135351	13143443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
Isoform_29130_1757	chr17	+	916	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	165	4780	-14	-262	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	1757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13226868	13234241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_29131_36	chr17	+	3676	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	165	2020	-14	-2020	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCCAGTGGTATGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	13226868	13237001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_29136_212	chr17	+	1058	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	20	4783	20	-265	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTCTGTGTGAATTGC	NA	False	NA	43	True	ATTAAA	-31	NA	13226723	13234238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_29137_86	chr17	+	1163	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	166	4532	-13	-14	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTAATCCTCTATTTA	NA	False	NA	17	True	ATTAAA	-14	NA	13226869	13234489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_29138_26	chr17	+	1105	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	-29	4785	-29	-267	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATACTCTGTGTGAATT	NA	False	NA	41	True	ATTAAA	-29	NA	13226674	13234236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
Isoform_2914_43	chr10	+	2570	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	36	7	16	-7	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAACTTGCCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	61516124	61529069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
Isoform_29146_61	chr17	+	624	4	ISM	ENSMUSG00000068036.17	ENSMUST00000156591.8	798	5	-2	1490	0	-1490	5prime_fragment	FALSE	canonical	3	198	junction_2	69.8108555710038	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	13980800	14029265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193
Isoform_29148_23	chr17	+	637	4	ISM	ENSMUSG00000068036.17	ENSMUST00000139347.8	822	5	-16	1515	-16	-1490	5prime_fragment	FALSE	canonical	3	139	junction_3	92.0664011581979	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	13980784	14029265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196
Isoform_29149_30	chr17	+	639	4	ISM	ENSMUSG00000068036.17	ENSMUST00000137708.8	5153	31	-78	87320	-18	-1490	5prime_fragment	FALSE	canonical	3	188	junction_2	72.8331426389571	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	13980782	14029265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193
Isoform_29152_22	chr17	+	622	4	NIC	ENSMUSG00000068036.17	novel	822	5	NA	NA	-4	-1490	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	93.3845097790135	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	13980796	14029265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196
Isoform_29153_3	chr17	+	2949	5	ISM	ENSMUSG00000068036.17	ENSMUST00000170827.9	7338	33	127932	0	-57	0	3prime_fragment	FALSE	canonical	3	370	junction_3	17.1518949390439	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14108734	14126056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
Isoform_29154_3	chr17	+	2012	2	ISM	ENSMUSG00000068036.17	ENSMUST00000124922.2	2662	3	3720	1	3720	0	3prime_fragment	FALSE	canonical	3	418	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14122805	14126056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_14122877_14124115
Isoform_29155_4	chr17	+	2560	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-32	-5	14	3	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTGTTACTTTAGGA	NA	False	NA	12	True	AATAAA	-20	NA	15163459	15166201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15163582_15163763
Isoform_29156_7	chr17	+	1563	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-2	962	-2	-14	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATAAATCAACTTGAT	NA	False	NA	-6	True	NA	NA	NA	15163489	15165234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15163582_15163763
Isoform_29157_8	chr17	+	2475	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	34	-3	-12	3	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTGTTACTTTAGGA	NA	False	NA	12	True	AATAAA	-20	NA	15163479	15166201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15163582_15163828
Isoform_29158_6	chr17	+	2524	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	-17	-1	-17	1	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCTGTTACTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	15163428	15166199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15163582_15163828
Isoform_2916_319	chr10	+	2229	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	51	6	51	-6	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTGTCTGTTGGCT	NA	False	NA	15	True	AATAAA	-18	NA	61531343	61538546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
Isoform_29160_12	chr17	+	1514	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	44	948	-2	2	multi-exon	FALSE	canonical	3	37	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTAAGGTCATCGTT	NA	False	NA	10	True	AATAAA	-15	NA	15163489	15165250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15163582_15163828
Isoform_29161_3	chr17	+	794	6	FSM	ENSMUSG00000036552.20	ENSMUST00000226599.2	788	6	-10	4	9	-4	multi-exon	FALSE	canonical	3	22	junction_5	84.7216619289305	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGTCCCTCTGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	15261885	15266167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15265897
Isoform_29162_3	chr17	+	1317	11	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	399	1708	-10	-177	5prime_fragment	FALSE	canonical	0	0	junction_7	77.0690599397709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGTCAGATATCTTTA	NA	False	NA	NA	False	ACTAAA	-32	NA	15199128	15209459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
Isoform_29163_3	chr17	+	1395	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	404	45	-5	-45	multi-exon	FALSE	canonical	0	0	junction_7	75.6540626145262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCTGGGTTCTGAAG	NA	False	NA	NA	False	AATATA	-18	NA	15199133	15211122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
Isoform_29164_3	chr17	+	1261	11	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	0	-37	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	76.5904040986859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTCTGAAGCTGAAATA	NA	False	NA	NA	False	AATATA	-26	NA	15199138	15211130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
Isoform_29165_3	chr17	+	1485	11	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	66	1713	66	-1713	5prime_fragment	FALSE	canonical	0	0	junction_7	68.9100863444532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230503	15240998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
Isoform_29166_6	chr17	+	1402	12	FSM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	63	219	63	-219	multi-exon	FALSE	canonical	0	0	junction_7	68.2306491805794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGGGTTCTGAAGCT	NA	False	NA	NA	False	AATATA	-20	NA	15230500	15242492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
Isoform_29167_8	chr17	+	2672	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	61	29320	15	-4735	5prime_fragment	FALSE	canonical	3	53	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTTGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	15616524	15624380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15616823_15622006
Isoform_2917_49	chr10	+	2284	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	0	2	0	-2	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTGTTGGCTGCTT	NA	False	NA	19	True	AATAAA	-22	NA	61531292	61538550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
Isoform_29170_7	chr17	+	2953	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	68	1399	22	-1399	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTAGTCTTTGAACTC	NA	False	NA	6	True	ATTAAA	-20	NA	15616531	15652301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
Isoform_29171_7	chr17	+	1776	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	64	10954	-8	-2	multi-exon	TRUE	canonical	3	150	junction_1	66.6565978791022	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTGCTTGTCTG	NA	False	NA	21	True	AAGAAA	-29	NA	15720213	15737687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
Isoform_29172_33	chr17	+	1057	6	ISM	ENSMUSG00000023852.15	ENSMUST00000173159.2	1372	8	-31	1276	13	-1276	5prime_fragment	FALSE	canonical	3	308	junction_1	31.9211528613864	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACAGTGTTTTGTGA	NA	False	NA	NA	False	AAAACA	-29	NA	15925248	15950894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744
Isoform_29173_15	chr17	+	1123	6	ISM	ENSMUSG00000023852.15	ENSMUST00000173159.2	1372	8	-97	1276	-46	-1276	5prime_fragment	TRUE	canonical	3	308	junction_1	31.9211528613864	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACAGTGTTTTGTGA	NA	False	NA	NA	False	AAAACA	-29	NA	15925182	15950894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744
Isoform_29175_9	chr17	+	1520	8	ISM	ENSMUSG00000023852.15	ENSMUST00000173311.8	4211	23	-4	20962	3	122	5prime_fragment	FALSE	canonical	3	308	junction_1	29.3048717827613	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAATTGGATAATTAT	NA	False	NA	NA	False	NA	NA	NA	15925231	15952292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115
Isoform_29179_24	chr17	+	1594	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	3	-1	3	1	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGTCTTTTGAAT	NA	False	NA	NA	False	AATGAA	-21	NA	17594836	17608017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
Isoform_29183_261	chr17	+	2027	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	266	927	3	-927	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTAGTTCTCTCTTTTC	NA	False	NA	12	True	AATAAA	-21	NA	17594836	17614234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_29184_60	chr17	+	2067	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	221	932	-42	-932	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATCTGTAGTTCTCTC	NA	False	NA	7	True	AATAAA	-16	NA	17594791	17614229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_29187_6	chr17	+	2301	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	-13	932	-13	-932	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATCTGTAGTTCTCTC	NA	False	NA	7	True	AATAAA	-16	NA	17594557	17614229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
Isoform_29189_68	chr17	+	2261	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	134	15	-42	-4	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGGTTCTCTAGTCT	NA	False	NA	24	True	AATAAA	-9	NA	21165706	21186163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
Isoform_2919_4	chr10	+	2216	4	FSM	ENSMUSG00000020087.6	ENSMUST00000218280.2	512	4	-1173	-531	23	-6	multi-exon	FALSE	canonical	0	0	junction_2	128.489515352637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTGTCTGTTGGCT	NA	False	NA	15	True	AATAAA	-18	NA	61531315	61538546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61532522_61534076_61534208_61535262_61535408_61537812
Isoform_29190_19	chr17	+	2346	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	49	15	49	-4	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGGTTCTCTAGTCT	NA	False	NA	24	True	AATAAA	-9	NA	21165621	21186163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
Isoform_29196_4	chr17	+	2022	5	NIC	ENSMUSG00000067942.7	novel	3800	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCACATAAGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	21229202	21263307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
Isoform_29197_18	chr17	+	2564	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	11	-1	11	1	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTCTCTCTCTCTGTC	NA	False	NA	3	True	AATAAA	-19	NA	21670646	21685850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
Isoform_29199_7	chr17	+	2420	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-10	655	-10	54	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTTTTATTTATTTT	1465	False	NA	NA	False	AATAAA	-41	NA	21709249	21730080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
Isoform_2920_21	chr10	+	3816	3	NIC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	23	-2	intron_retention	FALSE	canonical	3	276	junction_2	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTGTTGGCTGCTT	NA	False	NA	19	True	AATAAA	-22	NA	61531315	61538550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_61534208_61535221_61535408_61537812
Isoform_29200_3	chr17	+	2823	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-4	246	-4	-246	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAATAAAAAT	1471	False	NA	NA	False	NA	NA	NA	21709255	21730489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
Isoform_29201_54	chr17	+	763	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-4	-2244	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAATAAAAT	1471	False	NA	NA	False	NA	NA	NA	21709255	21727782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
Isoform_29203_4	chr17	+	2188	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	22	829	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCCTTGGTGGCCATT	1497	False	NA	NA	False	AATAAA	-15	NA	21709281	21752086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
Isoform_29205_3	chr17	+	2630	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	15	7	15	-7	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAACTGCATGGAAAGA	NA	False	NA	NA	False	AATAAA	-10	NA	21787284	21808954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
Isoform_29206_3	chr17	+	3427	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-21	803	-21	-803	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21926701	21943814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
Isoform_29208_6	chr17	+	4643	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-95	-3908	-95	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949680	21967950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
Isoform_29209_3	chr17	+	959	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-36	2003	1	-1152	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGTTCTATCATTAG	NA	False	NA	NA	False	TATAAA	-19	NA	22643203	22673667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
Isoform_2921_16	chr10	+	651	5	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-6	10339	6	387	5prime_fragment	FALSE	canonical	3	116	junction_1	28.6050694807756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTTTGTTTGATTG	NA	False	NA	NA	False	AAAAAG	-11	NA	61551095	61564087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907
Isoform_29210_3	chr17	+	2919	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	2	5	2	-5	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGACTTGGTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	22643241	22675665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
Isoform_29211_163	chr17	+	2655	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	44	-1	38	1	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	923	False	NA	29	True	AGTAAA	-13	NA	23819873	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_29212_17	chr17	+	2737	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	-38	-1	-38	1	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	841	False	NA	29	True	AGTAAA	-13	NA	23819791	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_29213_38	chr17	+	2602	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	1	6	1	1	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_29214_14	chr17	+	2697	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	-94	6	-94	1	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	785	False	NA	29	True	AGTAAA	-13	NA	23819735	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_29216_15	chr17	+	2472	5	NIC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	-38	1	intron_retention	FALSE	canonical	3	18	junction_2	109.005733794145	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	841	False	NA	29	True	AGTAAA	-13	NA	23819791	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240
Isoform_29218_7	chr17	+	2337	6	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	111.941055917836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_29219_3	chr17	+	2355	4	FSM	ENSMUSG00000023902.19	ENSMUST00000115509.8	2368	4	11	2	5	-2	multi-exon	FALSE	canonical	1	2	junction_2	114.030210422014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTAGTCCTGATTTT	890	False	NA	26	True	AGTAAA	-10	NA	23819840	23829984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23819934_23824478_23824939_23827081_23827140_23828240
Isoform_2922_59	chr10	+	3096	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-6	-4	6	-2	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGGAGCTTTTATT	NA	False	NA	6	True	AATAAA	-17	NA	61551095	61574430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
Isoform_29220_3	chr17	+	4048	4	NIC	ENSMUSG00000023902.19	novel	1074	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	153	junction_1	60.5768566001535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23819934_23824478_23826619_23827081_23827140_23828240
Isoform_29221_3	chr17	+	3968	5	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	-20	-4	intron_retention	FALSE	canonical	3	46	junction_4	98.5507483482495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAATTAGTCCTGATT	859	False	NA	24	True	AGTAAA	-8	NA	23819809	23829982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23819934_23824478_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_29222_5	chr17	+	2785	6	NNC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	6	1	intron_retention	FALSE	canonical	3	8	junction_1	100.210578283932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	891	False	NA	29	True	AGTAAA	-13	NA	23819841	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_23819934_23824380_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_29223_3	chr17	+	2700	7	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	105.164949801094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	880	False	NA	29	True	AGTAAA	-13	NA	23819830	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_23819934_23824380_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
Isoform_29224_11	chr17	+	2665	5	ISM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	4579	-1	-46	1	3prime_fragment	FALSE	canonical	3	169	junction_1	52.3473972609909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCCTGATTTTTTT	1911	False	NA	29	True	AGTAAA	-13	NA	23824408	23829987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
Isoform_29225_4	chr17	+	688	4	FSM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	-39	-52	-8	-1	multi-exon	FALSE	canonical	2	24	junction_1	165.748805928328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCTCAGCAGCCTTTG	NA	False	NA	10	True	AATAAA	-18	NA	23892561	23894200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23892678_23892942_23893043_23893520_23893650_23893857
Isoform_29226_110	chr17	+	586	3	ISM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	326	-50	326	-3	3prime_fragment	FALSE	canonical	3	343	junction_1	29	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892926	23894198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_23893043_23893520_23893650_23893857
Isoform_29228_10	chr17	+	920	3	NIC	ENSMUSG00000023904.11	novel	597	4	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	343	junction_1	29	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCTCAGCAGCCTTTG	NA	False	NA	10	True	AATAAA	-18	NA	23892594	23894200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23893043_23893520_23893650_23893857
Isoform_29229_5	chr17	+	1492	3	FSM	ENSMUSG00000023906.4	ENSMUST00000024699.4	1622	3	122	8	-1	-4	multi-exon	FALSE	canonical	2	3	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACAATGTGTCTGATGT	NA	False	NA	1	True	AATAAA	-15	NA	23898344	23901412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23898382_23898731_23898796_23900021
Isoform_29230_4	chr17	+	1518	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	39	-479	39	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTGTCTGATGTCTC	NA	False	NA	4	True	AATAAA	-18	NA	23898671	23901415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23898796_23900021
Isoform_29232_292	chr17	+	1963	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	80	-3	-53	0	multi-exon	FALSE	canonical	3	384	junction_2	52.6761379583211	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3018	False	NA	32	True	AAAAAG	-43	NA	23945389	23955707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_29233_32	chr17	+	2027	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	18	-5	6	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	2956	False	NA	34	True	AAAAAG	-45	NA	23945327	23955709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_29237_16	chr17	+	2688	6	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	384	junction_2	57.1615255219803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23945616_23951310_23951799_23952796_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_29238_11	chr17	+	2974	7	FSM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	-64	-8	57	0	multi-exon	FALSE	canonical	3	419	junction_2	45.7484061653154	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3007	False	NA	34	True	AAAAAG	-45	NA	23945378	23955709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_29239_14	chr17	+	2918	7	FSM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	-8	-8	-8	0	multi-exon	FALSE	canonical	3	419	junction_2	45.7484061653154	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3063	False	NA	34	True	AAAAAG	-45	NA	23945434	23955709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_2924_37	chr10	+	1456	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	54	2	6	-2	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGGAGCTTTTATT	NA	False	NA	6	True	AATAAA	-17	NA	61551095	61574430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
Isoform_29241_7	chr17	+	3686	5	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	451	junction_4	39.6925685739787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297_23955376_23955468
Isoform_29247_4	chr17	+	2639	11	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	0	8243	0	1	5prime_fragment	FALSE	canonical	3	184	junction_6	17.7654158408972	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAGTCAAAAACACCA	NA	False	NA	NA	False	NA	NA	NA	24022160	24035467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095
Isoform_29250_5	chr17	+	2765	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	16734	4	647	1	3prime_fragment	FALSE	canonical	3	160	junction_2	14.3069039278245	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	686	False	NA	12	True	AATAAA	-14	NA	24038928	24043711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
Isoform_29251_3	chr17	+	3309	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	16190	4	103	1	3prime_fragment	FALSE	canonical	3	160	junction_2	14.3069039278245	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	142	False	NA	12	True	AATAAA	-14	NA	24038384	24043711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
Isoform_29252_5	chr17	+	1254	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	-5	4	-5	-4	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	4526	False	NA	NA	False	NA	NA	NA	24257112	24264924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
Isoform_29254_184	chr17	+	1918	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	3	-1	3	1	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	916	False	NA	NA	False	AATAAA	-19	NA	24633651	24644870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_29255_37	chr17	+	1737	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	27	5	3	1	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	916	False	NA	NA	False	AATAAA	-19	NA	24633651	24644870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_29258_213	chr17	+	1799	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	12	5	0	1	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	913	False	NA	NA	False	AATAAA	-19	NA	24633648	24644870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_2926_12	chr10	+	1464	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	-24	2	0	-2	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCGATCCTCCTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	61551065	61575037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
Isoform_29260_143	chr17	+	1618	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	29	-1	0	1	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	913	False	NA	NA	False	AATAAA	-19	NA	24633648	24644870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_29261_27	chr17	+	2203	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	5	1	intron_retention	FALSE	canonical	3	495	junction_1	374.654888816743	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTGCTGGTTTTACT	937	False	NA	NA	False	AATAAA	-19	NA	24633672	24644870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
Isoform_29266_64	chr17	+	1082	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	52	3	-9	-3	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTCTTAGCTCTTGTG	4892	False	NA	8	True	TATAAA	-21	NA	24645666	24658291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_29267_163	chr17	+	1006	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	52	79	-9	21	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCACATATGTGCCT	4892	False	NA	15	True	NA	NA	NA	24645666	24658215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_29269_4	chr17	+	1142	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	-8	3	-8	-3	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTCTTAGCTCTTGTG	4832	False	NA	8	True	TATAAA	-21	NA	24645606	24658291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_2927_8	chr10	+	3099	9	NNC	ENSMUSG00000020085.16	novel	3086	9	NA	NA	6	-2	intron_retention	FALSE	canonical	3	18	junction_7	49.4014169837263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCTGGAGCTTTTATT	NA	False	NA	6	True	AATAAA	-17	NA	61551095	61574430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571233_61571438_61572361
Isoform_29270_7	chr17	+	1190	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTCTTAGCTCTTGT	4893	False	NA	7	True	TATAAA	-20	NA	24645667	24658290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_29271_7	chr17	+	1114	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	20	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGCCACATATGTGCC	4893	False	NA	14	True	NA	NA	NA	24645667	24658214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
Isoform_29272_79	chr17	+	2584	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	34	9	-9	-9	multi-exon	FALSE	canonical	3	1130	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTAGGTCTGCCTTC	NA	False	NA	16	True	ATTAAA	-13	NA	24689399	24692075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24690124_24690215
Isoform_29275_6	chr17	+	293	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	5	0	5	0	multi-exon	TRUE	canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4769	False	NA	14	True	AATAAA	-17	NA	24747226	24747718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24747411_24747609
Isoform_29276_13	chr17	+	983	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-32	-58	5	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	11	True	AATAAA	-23	NA	24851660	24857811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_29277_3	chr17	+	2082	5	NNC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	-1	intron_retention	FALSE	canonical	1	2	junction_2	103.36434346524	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	913	False	NA	9	True	AATAAA	-21	NA	24851660	24857809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_24851829_24852900_24854321_24854561_24854722_24857397_24857504_24857581
Isoform_29278_179	chr17	+	1075	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	5	-1	5	1	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	12	True	AATAAA	-24	NA	24851660	24857812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_29279_13	chr17	+	906	5	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATTTCTTGGCCCGTTG	906	False	NA	7	True	AATAAA	-19	NA	24851653	24857807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
Isoform_29280_12	chr17	+	2329	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	202	junction_1	27.4023518860861	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTCTTGGCCCGTTGG	906	False	NA	8	True	AATAAA	-20	NA	24851653	24857808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24851829_24852900_24854722_24857397_24857504_24857581
Isoform_29281_9	chr17	+	2076	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	0	8	0	-8	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTGATTTCTTGGCC	906	False	NA	2	True	AATAAA	-14	NA	24851653	24857802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
Isoform_29282_4	chr17	+	3322	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	10	-1	intron_retention	FALSE	canonical	3	27	junction_1	106.436209377574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	918	False	NA	9	True	AATAAA	-21	NA	24851665	24857809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24852833_24852900_24854722_24857397_24857504_24857581
Isoform_29283_49	chr17	+	3316	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-33	0	27	0	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1203	False	NA	12	True	AATAAA	-20	NA	24888687	24900990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_29288_103	chr17	+	3300	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	52	0	-8	0	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1228	False	NA	12	True	AATAAA	-20	NA	24888712	24900990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_29289_3	chr17	+	3833	11	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	229	junction_5	149.375533471851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1229	False	NA	12	True	AATAAA	-20	NA	24888713	24900990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_29290_4	chr17	+	3865	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-30	0	intron_retention	FALSE	canonical	3	262	junction_9	134.256470979987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1206	False	NA	12	True	AATAAA	-20	NA	24888690	24900990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_29291_4	chr17	+	4263	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	29	-3	intron_retention	FALSE	canonical	3	262	junction_8	127.155170952659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1205	False	NA	9	True	AATAAA	-17	NA	24888689	24900987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
Isoform_29292_9	chr17	+	4165	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	262	junction_8	119.890485006366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGCTGGTGTTCTGAG	1227	False	NA	10	True	AATAAA	-18	NA	24888711	24900988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
Isoform_29296_8280	chr17	+	949	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	2	0	-1	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	8280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTTTTTTTTGTC	6237	False	NA	-1	True	AATAAA	-18	NA	24939083	24940898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
Isoform_293_351	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV3_+_4081_4568_4780_6570
Isoform_29306_698	chr17	+	1090	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	0	4	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
Isoform_29307_23	chr18	-	871	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	63	31	52	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7486	False	NA	NA	False	AATAAA	-18	NA	61392980	61392109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61392100_61393000
Isoform_2931_19	chr10	+	3103	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	42	0	-5	0	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTGGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	62756453	62782277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
Isoform_29318_6	chr17	+	1286	9	ISM	ENSMUSG00000002500.16	ENSMUST00000170239.9	1375	10	517	2	163	-2	3prime_fragment	FALSE	canonical	3	9	junction_2	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCTGTCTCTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	24947310	24955115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_24947484_24949842_24950012_24951309_24951446_24952282_24952470_24952557_24952719_24952890_24952993_24954390_24954487_24954695_24954816_24954973
Isoform_29319_22	chr17	+	1249	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	-31	-7	9	0	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	False	NA	19	True	AATAAA	-19	NA	24955624	24961752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
Isoform_29320_69	chr17	+	871	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	9	6	9	1	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTTCCGTGTTTGTTGT	NA	False	NA	13	True	AATAAA	-13	NA	24955624	24961746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
Isoform_29321_5	chr17	+	1273	2	FSM	ENSMUSG00000039628.10	ENSMUST00000044922.8	1220	2	-57	4	-42	-3	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGGACTTGAAGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	24971919	24977654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24972473_24976934
Isoform_29322_4	chr17	+	946	3	ISM	ENSMUSG00000024158.18	ENSMUST00000154363.8	388	4	-16	-158	-16	158	intron_retention	FALSE	canonical	3	374	junction_2	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25069533	25073266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_25069643_25071704_25071881_25072605
Isoform_29323_149	chr17	+	1114	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	76	1	-10	-1	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTTATGGACTCTT	NA	False	NA	10	True	AAAAAG	-23	NA	25069539	25083423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
Isoform_29324_75	chr17	+	1148	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	40	3	40	1	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTGCTTATGGACTC	NA	False	NA	8	True	AAAAAG	-21	NA	25069503	25083421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
Isoform_29325_4	chr17	+	2156	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234862.2	995	2	168	-1329	168	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7341	False	NA	8	True	ATTAAA	-15	NA	25096797	25100983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25096897_25098926
Isoform_29326_13	chr17	+	2230	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234188.2	500	2	16	-1746	16	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7748	False	NA	8	True	ATTAAA	-15	NA	25097204	25100983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25097378_25098926
Isoform_29327_56	chr17	+	2258	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	366	1	-133	-1	multi-exon	FALSE	canonical	3	22	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	8141	False	NA	8	True	ATTAAA	-15	NA	25097597	25100983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25097799_25098926
Isoform_29328_23	chr17	+	2676	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	-50	-1	-7	1	multi-exon	FALSE	canonical	3	22	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	7725	False	NA	10	True	ATTAAA	-17	NA	25097181	25100985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25097799_25098926
Isoform_2933_4	chr10	+	3494	15	FSM	ENSMUSG00000036875.16	ENSMUST00000129785.2	3430	15	-83	19	1	-19	multi-exon	FALSE	canonical	3	200	junction_8	31.8382391062658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62782805	62801895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678
Isoform_29330_4	chr17	+	2591	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234754.2	2064	2	-526	-1	16	1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	7748	False	NA	10	True	ATTAAA	-17	NA	25097204	25100985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25097799_25098988
Isoform_29331_165	chr17	+	1569	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	63	9	4	3	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCAAGCTGCCTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	25105679	25111114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_29332_4	chr17	+	1650	6	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	6	1	intron_retention	FALSE	canonical	3	99	junction_1	41.0687228922449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105681	25111122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25110111_25110333
Isoform_29333_16	chr17	+	1748	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	192	9	113	3	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCAAGCTGCCTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	25105845	25111114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_29334_13	chr17	+	1867	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	73	9	-6	3	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCAAGCTGCCTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	25105726	25111114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
Isoform_29336_227	chr17	+	888	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	30	0	11	0	multi-exon	FALSE	canonical	3	645	junction_1	12	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114119	25115263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25114463_25114635_25114679_25114761
Isoform_29341_17	chr17	+	1061	2	FSM	ENSMUSG00000038880.14	ENSMUST00000138648.2	899	2	11	-173	11	0	multi-exon	FALSE	canonical	3	669	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114119	25115263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25114679_25114761
Isoform_29342_79	chr17	+	705	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	4	6	-1	-6	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCAAGACAAAAGTAGT	NA	False	NA	30	True	AATAAA	-29	NA	25115477	25116490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
Isoform_29343_6	chr17	+	680	4	FSM	ENSMUSG00000073435.11	ENSMUST00000145688.8	484	4	66	-262	64	-16	multi-exon	FALSE	canonical	3	183	junction_3	9.17726659862414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTGGTGAAGTTTCAAGA	NA	False	NA	20	True	AATAAA	-19	NA	25115560	25116480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25115733_25115825_25115928_25116001_25116115_25116187
Isoform_29345_4	chr17	+	5025	30	NIC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	15.5658243289342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGTTCTCTCAAAAGGC	6874	False	NA	10	True	AATAAA	-15	NA	25235055	25318456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_29346_7	chr17	+	5472	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	26	-9	18	1	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGTACTTCTCTCGT	7209	False	NA	24	True	AATAAA	-29	NA	25235390	25318470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_29347_7	chr17	+	5526	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	-40	3	-40	-3	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTCTCTCAAAAGGCTG	7143	False	NA	12	True	AATAAA	-17	NA	25235324	25318458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
Isoform_29348_76	chr17	+	4054	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	13	4	13	1	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352377	25381074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
Isoform_2935_3	chr10	+	4800	19	ISM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	16	2451	16	-2033	5prime_fragment	FALSE	canonical	3	200	junction_8	29.0182998880889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62782820	62807513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554
Isoform_29350_4	chr17	+	4865	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	30	0	intron_retention	FALSE	canonical	3	111	junction_7	12.1627277808041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352394	25381072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
Isoform_29351_10	chr17	+	1967	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	0	1063	0	-1063	multi-exon	FALSE	canonical	3	314	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGGAGTTAACGTAAC	NA	False	NA	3	True	AATAAA	-16	NA	25403527	25405573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403615_25403693
Isoform_29352_27	chr17	+	1932	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	37	1061	37	-1061	multi-exon	FALSE	canonical	3	314	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGTTAACGTAACTG	NA	False	NA	5	True	AATAAA	-18	NA	25403564	25405575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403615_25403693
Isoform_29353_7	chr17	+	2311	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	22	697	22	-697	multi-exon	FALSE	canonical	3	314	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGTCACAGGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	25403549	25405939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403615_25403693
Isoform_29354_53	chr17	+	903	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	0	2127	0	-2127	multi-exon	FALSE	canonical	3	314	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAATTTTCTCACCTCCC	NA	False	NA	14	True	AATACA	-19	NA	25403527	25404509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403615_25403693
Isoform_29355_151	chr17	+	872	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	27	2131	27	-2131	multi-exon	FALSE	canonical	3	314	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTCAATTTTCTCACC	NA	False	NA	10	True	AATACA	-15	NA	25403554	25404505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403615_25403693
Isoform_2936_196	chr10	+	4108	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	11	3	11	-2	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCACTGAGTCATTTTT	NA	False	NA	56	True	AATAAA	-17	NA	62782815	62809961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
Isoform_29362_4	chr17	+	3608	5	FSM	ENSMUSG00000015127.15	ENSMUST00000015271.12	3414	5	-193	-1	-150	0	multi-exon	FALSE	canonical	2	5	junction_2	29.3459963197708	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25441362	25453417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25441697_25447556_25447641_25449180_25449384_25449494_25449750_25450685
Isoform_29363_363	chr17	+	1159	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	32	1	32	-1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4635	False	NA	27	True	AATAAA	-17	NA	25459175	25461771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_29365_11	chr17	+	936	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	35	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	185.290312752718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4638	False	NA	27	True	AATAAA	-17	NA	25459178	25461771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25459339_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_29366_5	chr17	+	1253	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	17	-1	intron_retention	FALSE	canonical	3	375	junction_1	34.4700957352892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4620	False	NA	27	True	AATAAA	-17	NA	25459160	25461771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_29367_6	chr17	+	1650	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	20	-1	intron_retention	FALSE	canonical	3	415	junction_1	23.4426012966897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4623	False	NA	27	True	AATAAA	-17	NA	25459163	25461771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25460232_25460661_25460836_25461132_25461197_25461427
Isoform_29369_3	chr17	+	1287	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	504	11	18	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTGCATTTATTCCC	3236	False	NA	11	True	AATAAA	-14	NA	25789835	25794006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25790076_25792959
Isoform_29370_9	chr17	+	1832	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	22	4	0	-4	multi-exon	FALSE	canonical	1	15	junction_2	37.5467708331888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCAGCCTCCTGTCT	NA	False	NA	103	True	NA	NA	NA	25798172	25881796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_29371_19	chr17	+	1756	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	-3	105	0	-2	multi-exon	TRUE	canonical	1	15	junction_2	37.5467708331888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCTTCTCTACCTATACT	NA	False	NA	2	True	AATAAA	-13	NA	25798147	25881695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
Isoform_29372_4	chr17	+	350	3	FSM	ENSMUSG00000025739.14	ENSMUST00000172002.8	719	3	53	316	53	3	multi-exon	FALSE	canonical	2	6	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGTCCATTCCCTGT	NA	False	NA	19	True	TATAAA	-21	NA	25936197	25938064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25936252_25937640_25937773_25937900
Isoform_29373_14	chr17	+	1743	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	21	-3	6	3	multi-exon	FALSE	canonical	3	14	junction_1	25.198412648419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGTGACCATGAGCATA	NA	False	NA	21	True	AATAAA	-18	NA	25946711	25950435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25946822_25947154_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_29374_46	chr17	+	1696	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	45	4	30	2	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTGACCATGAGCAT	NA	False	NA	20	True	AATAAA	-17	NA	25946735	25950434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_29375_3	chr17	+	1678	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	62	3	0	3	multi-exon	FALSE	canonical	2	5	junction_1	28.5096474899287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGTGACCATGAGCATA	NA	False	NA	21	True	AATAAA	-18	NA	25946705	25950435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_29376_12	chr17	+	1511	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	30	-10	30	0	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946735	25950438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_29377_8	chr17	+	2206	4	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	7	3	intron_retention	FALSE	canonical	3	76	junction_3	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGTGACCATGAGCATA	NA	False	NA	21	True	AATAAA	-18	NA	25946712	25950435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25947621_25947799_25947903_25948041_25948144_25949342
Isoform_29378_4	chr17	+	2009	11	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	81.8291512848569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGATCCACTGTGTGTCT	6941	False	NA	5	True	AATAAA	-17	NA	25992770	26001764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25992862_25994019_25994116_25995922_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_29380_7	chr17	+	1897	11	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	76.6329563569095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTTCAAAGTTTTAT	6951	False	NA	35	True	NA	NA	NA	25992780	26001794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000705_26000989
Isoform_29381_81	chr17	+	2052	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	484	-9	52	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCCCCAGGATATGTC	6939	False	NA	63	True	NA	NA	NA	25992768	26001822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_29382_173	chr17	+	1996	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	540	-9	1	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCACTGTGTGTCTGG	6939	False	NA	7	True	AATAAA	-19	NA	25992768	26001766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_29383_9	chr17	+	2488	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	31	36	0	-36	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTCAGCTCAATAAATA	6951	False	NA	NA	False	AATAAA	-21	NA	25992780	26002270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
Isoform_29385_9	chr17	+	2338	10	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-9	50	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTCCCCAGGATATG	6939	False	NA	61	True	NA	NA	NA	25992768	26001820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
Isoform_29386_3	chr17	+	2824	10	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTACTCAAATGACTGC	6939	False	NA	NA	False	AATAAA	-19	NA	25992768	26002306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
Isoform_29387_10	chr17	+	3507	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-17	-1	-17	1	multi-exon	FALSE	canonical	3	16	junction_5	4.22374241638857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAAGTGGGTTATTA	NA	False	NA	-2	True	ATTAAA	-10	NA	26028041	26040230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
Isoform_29388_4	chr17	+	3574	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-84	-1	-84	1	multi-exon	TRUE	canonical	3	16	junction_5	4.22374241638857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAAGTGGGTTATTA	NA	False	NA	-2	True	ATTAAA	-10	NA	26027974	26040230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
Isoform_29389_249	chr17	+	3061	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	32	6	10	3	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042632	26047698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_2939_8	chr10	+	1203	12	ISM	ENSMUSG00000020070.19	ENSMUST00000131718.8	2816	13	13	2265	0	-18	5prime_fragment	FALSE	canonical	3	58	junction_7	9.7988024230321	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAATGAAATAATT	NA	False	NA	NA	False	TATAAA	-23	NA	62816030	62837980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961
Isoform_29390_21	chr17	+	3132	8	FSM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	10	-3	10	3	multi-exon	FALSE	canonical	3	89	junction_2	15.8449116277055	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042632	26047698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_29391_3	chr17	+	3255	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	12	-1	intron_retention	FALSE	canonical	3	89	junction_2	16.2343942158479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTTGTCACTTTCATT	NA	False	NA	17	True	AATAAA	-19	NA	26042634	26047703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046968_26047127_26047313_26047388
Isoform_29392_8	chr17	+	3193	8	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	91	junction_4	15.4166620702328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTGTCACTTTC	NA	False	NA	14	True	AATAAA	-16	NA	26042622	26047700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_29393_10	chr17	+	3262	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	100	junction_2	13.3499895963339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042622	26047698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
Isoform_29394_19	chr17	+	1021	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-1	6	0	3	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7194	False	NA	33	True	AATAAA	-34	NA	26094473	26096137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
Isoform_29396_133	chr17	+	808	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	426	9	0	0	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7194	False	NA	30	True	AATAAA	-31	NA	26094473	26096134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
Isoform_29398_3	chr17	+	956	3	ISM	ENSMUSG00000025731.17	ENSMUST00000110456.3	891	4	36	-3	0	3	intron_retention	FALSE	canonical	3	16	junction_1	233.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7194	False	NA	33	True	AATAAA	-34	NA	26094473	26096137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_26094701_26095193_26095254_26095468
Isoform_2940_4	chr10	+	3908	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	0	6	0	-2	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCAGTAGTTTCTA	NA	False	NA	11	True	AATAAA	-25	NA	63079701	63153651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29401_169	chr17	+	3441	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	16	7	-11	-2	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATGAGTGGTCTTTT	NA	False	NA	13	True	NA	NA	NA	26332305	26342221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
Isoform_29403_9	chr17	+	2388	13	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	107.829694683587	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGCTTGGCTTCTTTCT	NA	False	NA	8	True	AATAAA	-9	NA	26332305	26341317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060
Isoform_29405_4	chr17	+	3176	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	121.487747231039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332305	26342225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
Isoform_29406_964	chr17	+	1044	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	23	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGAGTCCTGTGAGTT	NA	False	NA	20	True	AGTAAA	-20	NA	26342496	26345586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
Isoform_29409_14	chr17	+	1022	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-21	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGAGTCCTGTGAGTT	NA	False	NA	20	True	AGTAAA	-20	NA	26342496	26345586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
Isoform_2941_3	chr10	+	4007	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	-95	2	-1	2	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079606	63153655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29411_13	chr17	+	1003	5	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	28	-3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	597.959603568669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGGAGTCCTGTGAG	NA	False	NA	18	True	AGTAAA	-18	NA	26342545	26345584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26345244
Isoform_29415_3	chr17	+	3404	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	2	-516	2	-1	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357925	26414784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
Isoform_29416_3	chr17	+	2950	10	ISM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	4402	1	472	-1	3prime_fragment	FALSE	canonical	3	153	junction_8	77.4883503789082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	1672	False	NA	10	True	AATAAA	-18	NA	26362063	26414784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
Isoform_29417_3	chr17	+	3312	9	ISM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	3670	-516	2	-1	3prime_fragment	FALSE	canonical	3	227	junction_7	45.5382737375935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	1202	False	NA	10	True	AATAAA	-18	NA	26361593	26414784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
Isoform_29418_3	chr17	+	2840	9	ISM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	4140	-514	472	-3	3prime_fragment	FALSE	canonical	3	227	junction_7	45.5382737375935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGATATGTGATATAC	1672	False	NA	8	True	AATAAA	-16	NA	26362063	26414782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
Isoform_2942_4	chr10	+	3727	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	15	172	-6	-100	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGAGTTTGCATATT	NA	False	NA	11	True	ATTAAA	-16	NA	63079716	63153485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29421_26	chr17	+	1715	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-48	5	0	-1	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATATGTTTACATTAGT	NA	False	NA	12	True	ATTAAA	-24	NA	26471924	26499692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_29422_5	chr17	+	5011	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTCAGGTGTTTT	NA	False	NA	15	True	NA	NA	NA	26471916	26504476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_29426_45	chr17	+	2687	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-17	0	1	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471940	26499694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_29427_4	chr17	+	2473	10	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-17	1	intron_retention	FALSE	canonical	3	162	junction_1	172.384010028715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGGGGTATCTG	NA	False	NA	11	True	AATAAA	-20	NA	26471907	26500943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_29431_129	chr17	+	1654	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	47	-1	-8	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471916	26499694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_29433_11	chr17	+	4969	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-32	-3	23	3	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGGTGTTTTGTCAC	NA	False	NA	20	True	NA	NA	NA	26471892	26504481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_29434_17	chr17	+	1429	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-32	3537	23	-1	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTGTGTTGGGGTATC	NA	False	NA	9	True	AATAAA	-18	NA	26471892	26500941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
Isoform_29436_20	chr17	+	3603	8	NIC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	27	-9	intron_retention	FALSE	canonical	3	531	junction_1	36.4159642049966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTATTATATGTTT	NA	False	NA	4	True	ATTAAA	-16	NA	26471896	26499684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
Isoform_29438_9	chr17	+	2848	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTGTGACTCTGCC	NA	False	NA	12	True	ATTAAA	-16	NA	26780496	26875906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
Isoform_29439_10	chr17	+	1263	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCACGTGTCTCTTTCCC	NA	False	NA	12	True	GATAAA	-14	NA	26780499	26874324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
Isoform_2944_4	chr10	+	4067	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-158	-11	-57	7	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTATGGTTGTAATTGA	NA	False	NA	24	True	AATAAA	-38	NA	63079531	63153664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29441_263	chr17	+	2720	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	35	-1	6	1	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTGTGACTCTGCC	NA	False	NA	12	True	ATTAAA	-16	NA	26780497	26875906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
Isoform_29443_6	chr17	+	2531	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	-20	243	-20	-243	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTCCCTTTGGTGTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	26780442	26875662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
Isoform_29444_43	chr17	+	2744	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	11	-1	11	1	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCTGTGACTCTGCC	NA	False	NA	12	True	ATTAAA	-16	NA	26780473	26875906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
Isoform_2945_63	chr10	+	3889	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	12	-3	0	-1	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63079701	63153656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29450_167	chr17	+	757	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTCCAGTGTTTAA	NA	False	NA	35	True	AATAAA	-23	NA	26895391	26918619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
Isoform_29451_612	chr17	+	776	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	45	2	3	-2	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTCCAGTGTTTAA	NA	False	NA	35	True	AATAAA	-23	NA	26895388	26918619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
Isoform_29453_3	chr17	+	1124	7	FSM	ENSMUSG00000024191.16	ENSMUST00000134344.8	1087	7	-40	3	-1	-3	multi-exon	FALSE	canonical	1	1	junction_4	44.5374374356376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGAGTGGTAAATGCT	2009	False	NA	11	True	AATAAA	-11	NA	27000054	27011491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27008893_27008939_27009899_27010019_27010914
Isoform_29454_144	chr17	+	1079	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	18	1	2	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGTGGTAAATGCTTAA	2012	False	NA	14	True	AATAAA	-14	NA	27000057	27011494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
Isoform_29455_8	chr17	+	1257	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	-163	4	-163	-3	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGAGTGGTAAATGCT	1831	False	NA	11	True	AATAAA	-11	NA	26999876	27011491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
Isoform_29456_4	chr17	+	985	5	FSM	ENSMUSG00000024191.16	ENSMUST00000137989.2	818	5	-74	-93	2	-2	multi-exon	FALSE	canonical	2	4	junction_2	37.8615900352851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGAGTGGTAAATGCTT	2012	False	NA	12	True	AATAAA	-12	NA	27000057	27011492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27000151_27002418_27002512_27008668_27008771_27009899_27010019_27010914
Isoform_29457_16	chr17	+	810	3	FSM	ENSMUSG00000024301.11	ENSMUST00000236476.2	819	3	10	-1	10	1	multi-exon	FALSE	canonical	3	106	junction_1	42	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27136074	27140483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27136260_27139770_27139906_27139993
Isoform_29458_63	chr17	+	2326	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	10	295	10	-295	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTCTTAATCTTAGA	NA	False	NA	8	True	AATAAA	-21	NA	27136074	27151262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_29459_7	chr17	+	2600	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	29	2	-1	-2	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCATTGTGATGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	27136093	27151555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_29460_9	chr17	+	2272	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	10	-295	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTCTTAATCTTAGA	NA	False	NA	8	True	AATAAA	-21	NA	27136074	27151262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
Isoform_29461_5	chr17	+	2493	15	FSM	ENSMUSG00000024193.9	ENSMUST00000073724.7	2522	15	32	-3	32	3	multi-exon	TRUE	canonical	2	7	junction_11	6.30718734816859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGACAAGAGGCGCTC	NA	False	NA	25	True	AATAAA	-35	NA	27152057	27156885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156027_27156109_27156253
Isoform_29462_4	chr17	+	2575	14	FSM	ENSMUSG00000024193.9	ENSMUST00000237189.2	2526	14	-49	0	-31	0	multi-exon	FALSE	canonical	3	8	junction_1	5.73992557113158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGCATGAGTCATTTT	NA	False	NA	3	True	AATAAA	-13	NA	27152073	27156863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155655_27155744_27155840_27156027_27156109_27156253
Isoform_29463_91	chr17	+	2759	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	31	6	-19	-6	multi-exon	FALSE	canonical	3	46	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGACAGTAGACTGGCTT	NA	False	NA	10	True	AATAAA	-18	NA	27192171	27195171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27192289_27192529
Isoform_29464_9	chr17	+	2166	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	-16	646	-16	-646	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCCTGAGTTCAATTCC	NA	False	NA	NA	False	NA	NA	NA	27192124	27194531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27192289_27192529
Isoform_29465_3	chr17	+	3873	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	27	-1104	-23	1104	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTAGTGTCTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	27192167	27196281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27192289_27192529
Isoform_29466_25	chr17	+	386	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	65	0	-10	0	multi-exon	FALSE	canonical	3	59	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	22	True	AGTAAA	-14	NA	27237025	27241491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27237145_27241224
Isoform_29467_11	chr17	+	2267	9	NIC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_2	17.8321163914999	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGCTGTCTGTCCC	NA	False	NA	18	True	AATAAA	-19	NA	27237040	27255351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_27237145_27241224_27241315_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_29468_6	chr17	+	2350	10	NNC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	-10	-7	intron_retention	FALSE	canonical	0	0	junction_2	17.870591056016	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCACCTCCTGGGCTGT	NA	False	NA	11	True	AATAAA	-12	NA	27237025	27255344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_27237145_27241224_27241315_27242102_27242178_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_29469_3	chr17	+	1078	7	FSM	ENSMUSG00000048731.16	ENSMUST00000122106.9	1138	7	59	1	-10	0	multi-exon	FALSE	canonical	2	5	junction_2	8.62972897733308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGCTGTCTGTCCC	NA	False	NA	18	True	AATAAA	-19	NA	27237025	27255351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27237145_27244310_27244434_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
Isoform_2947_25	chr10	+	4008	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-100	-10	1	6	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTATGGTTGTAATTG	NA	False	NA	23	True	AATAAA	-37	NA	63079589	63153663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
Isoform_29470_4	chr17	+	4354	26	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	50517	0	1644	0	3prime_fragment	FALSE	canonical	3	165	junction_1	26.1350339582714	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	1400	False	NA	16	True	AATAAA	-20	NA	27326794	27341197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
Isoform_29472_3	chr17	+	1706	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	156	-817	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27775626	27782637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_29473_9	chr17	+	1580	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	52	-1	-2	0	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775610	27782643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_29474_3	chr17	+	1240	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	22	369	3	265	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTTGTGTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	27775580	27782273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_29475_22	chr17	+	1631	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	47	3	6	1	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775594	27782645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_29477_5	chr17	+	1603	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	13	-699	1	1	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775627	27782645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_29479_9	chr17	+	1637	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	39	-646	0	1	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775626	27782645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_29480_3	chr17	+	1360	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	9	-339	8	-299	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTCAGATGTTCATCC	NA	False	NA	NA	False	NA	NA	NA	27775596	27782338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_29481_3	chr17	+	1951	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	-45	-8	8	1	multi-exon	FALSE	canonical	3	442	junction_1	2173.91908485574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775596	27782645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
Isoform_29482_6	chr17	+	1988	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	15	-2	4	1	multi-exon	FALSE	canonical	3	442	junction_1	2057.89800221002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775592	27782645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
Isoform_29483_4	chr17	+	1684	10	FSM	ENSMUSG00000040276.16	ENSMUST00000045896.11	4176	10	41	2451	1	1	multi-exon	TRUE	canonical	0	0	junction_1	19.6078845315467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	TTTAAA	-13	NA	27874562	27927634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27874734_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_29484_3	chr17	+	1711	10	FSM	ENSMUSG00000040276.16	ENSMUST00000231669.2	4209	10	47	2451	1	1	multi-exon	FALSE	canonical	1	1	junction_1	19.4193488848393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	TTTAAA	-13	NA	27904201	27927634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_27904400_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_29485_26	chr17	+	1431	8	ISM	ENSMUSG00000040276.16	ENSMUST00000097360.3	1800	10	17501	-33	-1759	0	3prime_fragment	FALSE	canonical	3	26	junction_1	11.2866184086307	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCGTTTGCAGCCTACC	NA	False	NA	NA	False	TTTAAA	-45	NA	27921671	27927666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
Isoform_29487_1084	chr17	+	731	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	28	-1	-20	1	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGTCCCTGTCCCTTG	NA	False	NA	19	True	AATAAA	-21	NA	28059088	28070940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
Isoform_29488_244	chr17	+	759	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGTCCCTGTCCCTTG	NA	False	NA	19	True	AATAAA	-21	NA	28059060	28070940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
Isoform_29492_8	chr17	+	4894	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	53	3687	53	-869	multi-exon	TRUE	canonical	3	66	junction_6	13.1601671721905	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGCGTGTCCTGGCGCT	5838	False	NA	44	True	NA	NA	NA	28075467	28115328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
Isoform_29493_3	chr17	+	3355	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-215	682	-7	-487	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCGCTCTCCCTTTCGG	NA	False	NA	4	True	AAGAAA	-32	NA	28361284	28390429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_29494_6	chr17	+	3345	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	131	3400	-46	-488	multi-exon	TRUE	canonical	3	23	junction_15	6.58693821908486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGCGCTCTCCCTTTCG	NA	False	NA	3	True	AAGAAA	-31	NA	28361245	28390428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
Isoform_29495_13	chr17	+	2587	14	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	21.8653761585803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396400	28424858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416724_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_29496_35	chr17	+	2845	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	18	1	-16	1	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396120	28424859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_29497_106	chr17	+	2573	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	289	2	0	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396391	28424858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_29500_5	chr17	+	2612	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	22.220486043289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGGCTCCTCCATCA	NA	False	NA	1	True	AATAAA	-13	NA	28396117	28424857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_29501_3	chr17	+	3260	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	4	1	intron_retention	FALSE	canonical	3	64	junction_9	9.71646655025489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396379	28424859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
Isoform_29502_8	chr17	+	2285	11	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.568650436677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426781	28447577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28426913_28435895_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
Isoform_29503_378	chr17	+	2241	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	30	6	5	-6	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTCCTGCCCTTCCC	NA	False	NA	11	True	AATAAA	-16	NA	28426781	28447576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
Isoform_29505_5	chr17	+	2071	10	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	-5	-5	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	44.5274225396518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426805	28447577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
Isoform_29509_8	chr17	+	2540	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	1	8740	1	-441	intron_retention	FALSE	canonical	3	142	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACTGAAAAAAAAAAT	360	False	NA	NA	False	NA	NA	NA	28532546	28536802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_28532857_28534572
Isoform_29511_8	chr17	+	2170	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	56.7912845426127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	310	False	NA	13	True	AATAAA	-15	NA	28532496	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545067
Isoform_29512_9	chr17	+	2143	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	55.0784894491488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	277	False	NA	11	True	AATAAA	-13	NA	28532463	28545540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
Isoform_29514_28	chr17	+	2053	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	40.6086410557539	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	332	False	NA	13	True	AATAAA	-15	NA	28532518	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_29515_91	chr17	+	2020	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	1	4	1	0	multi-exon	FALSE	canonical	3	100	junction_4	20.9655802580218	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	307	False	NA	13	True	AATAAA	-15	NA	28532493	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_29517_4	chr17	+	1957	9	NIC	ENSMUSG00000007570.17	novel	1842	9	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	48.7179381747627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTGGTGGCTCAGCC	303	False	NA	14	True	AATAAA	-16	NA	28532489	28545543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545067
Isoform_29518_7	chr17	+	1849	9	FSM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	-8	1	-2	0	multi-exon	FALSE	canonical	3	8	junction_8	47.2385898921634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	351	False	NA	12	True	AATAAA	-14	NA	28532537	28545541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
Isoform_29519_4	chr17	+	2019	10	FSM	ENSMUSG00000007570.17	ENSMUST00000233381.2	1774	10	-246	1	5	-1	multi-exon	FALSE	canonical	3	26	junction_9	49.8013337121223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGGTGGCTCAGCCC	339	False	NA	15	True	AATAAA	-17	NA	28532525	28545544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_2952_7	chr10	+	1255	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	21	1749	13	0	multi-exon	TRUE	canonical	3	25	junction_2	1.58113883008419	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCATTTAGGATGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	63222362	63244606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
Isoform_29520_21	chr17	+	1984	10	FSM	ENSMUSG00000007570.17	ENSMUST00000088007.12	1942	10	-40	-2	4	0	multi-exon	FALSE	canonical	3	32	junction_5	38.9558154266543	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	314	False	NA	13	True	AATAAA	-15	NA	28532500	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_29521_5	chr17	+	2046	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	61.345610687459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	310	False	NA	13	True	AATAAA	-15	NA	28532496	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
Isoform_29522_16	chr17	+	2009	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	49.7543967906355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	310	False	NA	13	True	AATAAA	-15	NA	28532496	28545542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
Isoform_29523_40	chr17	+	1958	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	35.076478942448	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	307	False	NA	17	True	AATAAA	-19	NA	28532493	28545546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_29524_7	chr17	+	1896	9	NIC	ENSMUSG00000007570.17	novel	1942	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	48.2720157026822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	334	False	NA	11	True	AATAAA	-13	NA	28532520	28545540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
Isoform_29527_5147	chr17	+	717	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	112	1	0	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	5147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
Isoform_29528_93	chr17	+	747	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	82	1	-15	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547526	28550006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
Isoform_2953_4	chr10	+	1027	7	NIC	ENSMUSG00000037876.18	novel	3076	10	NA	NA	6	72	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	58.9802226739325	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGAAGGAAGATAAAT	NA	False	NA	NA	False	NA	NA	NA	66932276	67054207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055
Isoform_29531_469	chr17	+	950	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	-1	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
Isoform_29533_196	chr17	+	1043	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	-17	-4	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
Isoform_2954_4	chr10	+	857	6	NIC	ENSMUSG00000037876.18	novel	3076	10	NA	NA	2	12	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	55.3404011550332	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAAGTATTCGTCCAA	NA	False	NA	NA	False	AAAACA	-22	NA	66932272	67054147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67052761_67052887_67053816_67053961_67054055
Isoform_2955_41	chr10	+	2428	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	35	-217	35	217	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAATCTGCTATTCAA	NA	False	NA	25	True	ATTAAA	-22	NA	67815579	67878345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_29557_3	chr17	+	1168	4	FSM	ENSMUSG00000062252.10	ENSMUST00000080780.8	1313	4	68	77	-39	-77	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTTCTTTATCGTCTT	8632	False	NA	NA	False	NA	NA	NA	28794694	28802490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28795387_28798904_28799142_28801953_28802000_28802297
Isoform_29558_7	chr17	+	1521	11	ISM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	85	3056	-13	288	5prime_fragment	FALSE	canonical	3	310	junction_9	34.6842903920492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCGTTTATGTAATATT	5162	False	NA	NA	False	NA	NA	NA	28910400	28964323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956
Isoform_29559_22	chr17	+	3471	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	77	0	-21	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5154	False	NA	12	True	AATAAA	-19	NA	28910392	28967379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
Isoform_2956_33	chr10	+	2475	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-17	-212	0	212	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATTTGTAATCTGCTA	NA	False	NA	20	True	ATTAAA	-17	NA	67815527	67878340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_29560_4	chr17	+	3560	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	-12	0	1	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5065	False	NA	12	True	AATAAA	-19	NA	28910303	28967379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
Isoform_29561_4	chr17	+	1392	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	16	1529	16	200	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGCCCCTTTTCTGTT	NA	False	NA	12	True	NA	NA	NA	28988286	28997678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
Isoform_29562_3	chr17	+	2409	2	ISM	ENSMUSG00000063952.17	ENSMUST00000233646.2	4497	11	-231	30253	36	1793	5prime_fragment	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29020099	29027075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_29020336_29024902
Isoform_29564_46	chr17	+	3968	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	228	0	-1	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171459	29188523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_29566_33	chr17	+	2407	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	188	1601	-6	11	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACAAGTGTGCTCTTA	NA	False	NA	21	True	AATAAA	-32	NA	29171419	29186922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_29567_196	chr17	+	3789	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	64	0	-1	0	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171459	29188523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_29568_129	chr17	+	2228	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	24	1601	-6	11	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACAAGTGTGCTCTTA	NA	False	NA	21	True	AATAAA	-32	NA	29171419	29186922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
Isoform_2957_8	chr10	+	2572	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-115	-211	2	211	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTTGTAATCTGCT	NA	False	NA	19	True	ATTAAA	-16	NA	67815429	67878339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_29581_44	chr17	+	2567	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	6	0	-6	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGGTTGGAGTATATT	NA	False	NA	12	True	ATTAAA	-14	NA	29251646	29262341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
Isoform_29585_968	chr17	+	1295	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	1278	0	-15	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTGTTTAACTTGAAA	NA	False	NA	22	True	ATTAAA	-13	NA	29251646	29261069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
Isoform_29595_5	chr17	+	1203	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233006.2	1125	3	-71	-7	-71	-3	multi-exon	FALSE	canonical	1	3	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGACTGGTAAGC	1538	False	NA	NA	False	NA	NA	NA	29275762	29278726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29275960_29276834_29276933_29277818
Isoform_29596_47	chr17	+	770	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	14	138	14	-14	multi-exon	FALSE	canonical	3	83	junction_1	538	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAACAAAACAAAAC	1871	False	NA	66	True	NA	NA	NA	29309966	29318537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29310076_29317370_29317812_29318317
Isoform_29597_12	chr17	+	1932	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	11	-1021	11	0	multi-exon	FALSE	canonical	3	83	junction_1	538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	1868	False	NA	24	True	NA	NA	NA	29309963	29319696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29310076_29317370_29317812_29318317
Isoform_29599_12	chr17	+	1254	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	6	1159	6	-14	intron_retention	FALSE	canonical	3	1306	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAACAAAACAAAAC	4653	False	NA	66	True	NA	NA	NA	29312748	29318537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_29312836_29317370
Isoform_29600_154	chr17	+	1910	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	0	3	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4650	False	NA	24	True	NA	NA	NA	29312745	29319696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29312836_29317370_29317812_29318317
Isoform_29601_631	chr17	+	751	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	1159	3	-14	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAACAAAACAAAAC	4650	False	NA	66	True	NA	NA	NA	29312745	29318537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29312836_29317370_29317812_29318317
Isoform_29604_26	chr17	+	1338	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	109	1365	-19	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	420	False	NA	15	True	AATAAA	-16	NA	29487870	29520499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29605_125	chr17	+	1273	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	173	1366	0	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGGTTGGTTGCTTA	484	False	NA	14	True	AATAAA	-15	NA	29487934	29520498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29606_13	chr17	+	1428	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	18	1366	18	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGGTTGGTTGCTTA	329	False	NA	14	True	AATAAA	-15	NA	29487779	29520498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29608_9	chr17	+	1074	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	2	-3	-1	0	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	470	False	NA	15	True	AATAAA	-16	NA	29487920	29520499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29609_3	chr17	+	916	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	420	False	NA	15	True	AATAAA	-16	NA	29487870	29520499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_2961_3	chr10	+	2364	11	NIC	ENSMUSG00000037846.19	novel	2246	12	NA	NA	2	211	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	24.9887974900754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTTGTAATCTGCT	NA	False	NA	19	True	ATTAAA	-16	NA	67815529	67878339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67877208
Isoform_29610_4	chr17	+	858	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	478	False	NA	15	True	AATAAA	-16	NA	29487928	29520499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29611_14	chr17	+	1183	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	136	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	484	False	NA	15	True	AATAAA	-16	NA	29487934	29520499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29612_3	chr17	+	768	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	-6	11	-1	-4	multi-exon	FALSE	canonical	3	14	junction_1	140.841187157735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGCATGGGTTGGT	470	False	NA	8	True	AATAAA	-9	NA	29487920	29520492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
Isoform_29615_1066	chr17	+	2689	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	6	3	6	1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAGTTTTCCATTC	NA	False	NA	14	True	AATAAA	-15	NA	29709732	29715083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
Isoform_2962_31	chr10	+	2438	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	173	1359	28	211	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTTGTAATCTGCT	NA	False	NA	19	True	ATTAAA	-16	NA	67815572	67878339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
Isoform_29621_29	chr17	+	2753	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	-58	3	-58	1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAGTTTTCCATTC	NA	False	NA	14	True	AATAAA	-15	NA	29709668	29715083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
Isoform_29626_290	chr17	+	3588	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	6	1	0	0	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
Isoform_29629_16	chr17	+	3531	12	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	38.1705611111127	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_29768969_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
Isoform_2963_3	chr10	+	2647	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	-22	1797	1	-15	multi-exon	FALSE	canonical	1	2	junction_2	2.33452350598575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAACAAAATCC	NA	False	NA	NA	False	NA	NA	NA	69049001	69125813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
Isoform_29631_139	chr17	+	1977	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	95	3332	-5	10	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGGTGTGTTTA	NA	False	NA	26	True	AATAAA	-25	NA	29833858	29860633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
Isoform_29632_22	chr17	+	2062	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	2	3340	2	2	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833765	29860625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
Isoform_29634_12	chr17	+	3728	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	31	2621	5	0	multi-exon	TRUE	canonical	3	368	junction_15	33.7979652859003	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879599	29922332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
Isoform_29636_15	chr17	+	2695	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	344	0	13	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTGTCTGTGTTGGC	NA	False	NA	7	True	ATTAAA	-16	NA	30224050	30428996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_29639_3	chr17	+	2967	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	68	4	68	-2	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGGATTGTCTGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	30223774	30428992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_2964_3	chr10	+	3873	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	25	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	26.6857171535636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761673	69860452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_29641_4	chr17	+	1045	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	-22	1617	-6	-16	multi-exon	FALSE	canonical	2	8	junction_3	41.3037528561268	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTTGTTTTGAGCAT	NA	False	NA	6	True	ATTAAA	-7	NA	30224015	30427377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
Isoform_29642_3	chr17	+	2943	5	FSM	ENSMUSG00000044477.13	ENSMUST00000226421.3	3489	5	-261	807	54	1	multi-exon	FALSE	canonical	2	11	junction_1	47.3623004086584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGATTGTCTGTGTTGG	NA	False	NA	6	True	ATTAAA	-15	NA	30223760	30428995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_30224283_30354296_30354480_30372276_30372343_30411536_30411705_30426991
Isoform_29643_4	chr17	+	3455	20	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	19	131703	2	59	5prime_fragment	TRUE	canonical	3	31	junction_2	9.07494190819529	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTGGGTCCTTTCCCT	219	False	NA	NA	False	AATAAA	-22	NA	30845928	30903584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104
Isoform_29644_11	chr17	+	3427	23	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	31	122274	14	9488	5prime_fragment	FALSE	canonical	3	31	junction_2	9.57527808542515	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAGATGAATTTAAAA	231	False	NA	NA	False	NA	NA	NA	30845940	30913013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922
Isoform_29645_14	chr17	+	3587	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	15	2230	15	1270	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACACCAAAAAG	NA	False	NA	NA	False	TATAAA	-19	NA	31276675	31334732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
Isoform_29646_12	chr17	+	2863	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	-4	-320	-4	320	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTCAGGTCGTTTTCT	NA	False	NA	9	True	CATAAA	-22	NA	31431082	31461384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
Isoform_29648_12	chr17	+	3012	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	-29	316	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTCGCTCAGGTCGTT	NA	False	NA	5	True	CATAAA	-18	NA	31431057	31461380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
Isoform_2965_5	chr10	+	3724	16	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	58	15054	44	1048	5prime_fragment	FALSE	canonical	3	68	junction_4	11.2853887837327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGCAATGTTGTGTGGTT	NA	False	NA	NA	False	ATTAAA	-29	NA	69761692	69836581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
Isoform_29653_23	chr17	+	2741	20	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-31	2	combination_of_known_junctions	TRUE	canonical	3	25	junction_1	25.6401693159089	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515146	31569671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_29657_57	chr17	+	3375	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-16	30	-5	2	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515172	31569671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_29658_80	chr17	+	3326	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	33	30	33	2	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515221	31569671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_2966_3	chr10	+	4108	18	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	58	10238	44	843	5prime_fragment	FALSE	canonical	3	43	junction_16	15.5066678369289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAAATTATCTCTCAC	NA	False	NA	NA	False	ATTAAA	-10	NA	69761692	69841397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439
Isoform_29661_4	chr17	+	2735	20	NIC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.9874396605666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	31515966	31569671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_31516044_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
Isoform_29662_14	chr17	+	1892	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	44	153	0	1	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTCTGTATTTTTTTT	NA	False	NA	NA	False	AATATA	-13	NA	31605227	31695131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
Isoform_29663_3	chr17	+	2073	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	16	0	16	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGTGTGCATGTGTCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	31605199	31695284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
Isoform_29664_6	chr17	+	1918	19	FSM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	-30	3	14	0	multi-exon	FALSE	canonical	3	20	junction_18	14.1770114735436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGTCTGTATTTTTTT	NA	False	NA	NA	False	AATATA	-12	NA	31605197	31695130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694901
Isoform_29666_16	chr17	+	1537	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	38	7	6	-2	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTATGTGGTTATT	NA	False	NA	24	True	AATAAA	-14	NA	31739129	31750298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
Isoform_29667_429	chr17	+	451	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	35	7	0	-2	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTATGTGGTTATT	NA	False	NA	24	True	AATAAA	-14	NA	31739123	31750298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31739236_31740542_31740667_31750083
Isoform_29672_4	chr17	+	4434	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	26	junction_6	55.2265057934029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGATTGATTCTGTAAAGC	NA	False	NA	27	True	ATTAAA	-20	NA	31783767	31826665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_29676_4	chr17	+	2066	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	28	2158	3	4	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTTGTCTTTCGATTC	NA	False	NA	NA	False	GATAAA	-20	NA	31783735	31824509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_2968_8	chr10	+	4439	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	299	334	12	-6	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761660	69860450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_29683_10	chr17	+	4215	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	-47	-2154	1	-8	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGACGATTGATTCTG	NA	False	NA	21	True	ATTAAA	-14	NA	31783733	31826659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
Isoform_29693_217	chr17	+	2304	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	308	2262	-2	30	multi-exon	TRUE	canonical	3	488	junction_12	76.5992747282172	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGGCTTTTTAATTAC	NA	False	NA	13	True	TATAAA	-13	NA	32255381	32279577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
Isoform_29694_58	chr17	+	4563	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	308	3	-2	-3	multi-exon	FALSE	canonical	3	488	junction_12	76.5992747282172	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255381	32281836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
Isoform_2970_4	chr10	+	3591	18	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-126	19040	9	879	5prime_fragment	FALSE	canonical	3	64	junction_16	12.4850083110085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGAGTTGTTTCGGCTTT	NA	False	NA	NA	False	AATGAA	-10	NA	69761657	69841433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
Isoform_29707_15	chr17	+	2603	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	-29	44	-29	2	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGCTCCGTTTATT	NA	False	NA	NA	False	ACTAAA	-20	NA	32671667	32712250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
Isoform_29708_15	chr17	+	2236	12	FSM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	160	-797	160	2	multi-exon	FALSE	canonical	3	23	junction_2	19.6026646864634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGCTCCGTTTATT	1496	False	NA	NA	False	ACTAAA	-20	NA	32687595	32712250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
Isoform_2971_15	chr10	+	3208	19	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-114	8835	21	3	5prime_fragment	FALSE	canonical	3	64	junction_16	12.9177120246047	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAGATGTATATATGT	NA	False	NA	18	True	AATAAA	-23	NA	69761669	69851638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
Isoform_29711_4	chr17	+	2001	10	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3475	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	22.9093759446398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGACAATTTGTGCTCCG	NA	False	NA	NA	False	ACTAAA	-14	NA	32700699	32712244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_29712_14	chr17	+	1965	9	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3741	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.4523801633591	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTACTGGCATGGGGC	NA	False	NA	NA	False	AATAGA	-15	NA	32700965	32712295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275_32711738_32711759
Isoform_29713_4	chr17	+	1842	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13504	-671	3715	-124	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCGTCCATCTCATCCG	NA	False	NA	NA	False	AGTAAA	-15	NA	32700939	32712124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
Isoform_29714_7	chr17	+	2965	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	9.27773619418492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	32725419	32749119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
Isoform_29715_17	chr17	+	2943	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	1	-1251	1	2	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	32725436	32749119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
Isoform_29716_26	chr17	+	2236	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	6	0	-5	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6806278249036	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755537	32770772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_29717_3	chr17	+	2091	12	FSM	ENSMUSG00000048440.17	ENSMUST00000165515.8	2078	12	-13	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_2	22.7559818672762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755537	32770772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32755630_32755968_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_29718_46	chr17	+	2231	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32755538	32770771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_29719_4	chr17	+	2085	12	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	-5	-1	combination_of_known_junctions	TRUE	canonical	3	16	junction_2	20.9331876957963	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGCATGTCTTGGTTCC	NA	False	NA	18	True	NA	NA	NA	32755537	32770769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
Isoform_29720_18	chr17	+	2205	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	171	0	-171	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGGTCAGTGTCTCA	NA	False	NA	71	True	AATAAA	-21	NA	33184787	33198036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
Isoform_29721_28	chr17	+	2145	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-3	234	-3	-234	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTGAGTATTTTTA	NA	False	NA	8	True	AATAAA	-17	NA	33184784	33197973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
Isoform_29723_10	chr17	+	2406	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-29	-1	-29	1	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTGGCTGGCATAGT	NA	False	NA	NA	False	AATAAA	-38	NA	33184758	33198208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
Isoform_29724_19	chr17	+	2807	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-65	208	3	-208	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGGAATTTGTGC	NA	False	NA	12	True	AATAAA	-19	NA	33212105	33224223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
Isoform_29726_5	chr17	+	2761	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	-10	-1993	-10	1993	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGATTTTGGTCAGT	NA	False	NA	NA	False	NA	NA	NA	33311421	33326025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
Isoform_29728_20	chr17	+	3213	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	-8	2583	-8	491	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATAAAATATAGTCGA	NA	False	NA	-5	True	AATAAA	-14	NA	33508509	33523632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
Isoform_2973_17	chr10	+	3836	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-106	21	29	-4	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761677	69860452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
Isoform_29734_6	chr17	+	2320	15	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	3516	7	3516	-1	3prime_fragment	FALSE	canonical	1	4	junction_4	23.6147869620987	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGCAAGAAGTAAATTA	NA	False	NA	NA	False	AATAAA	-12	NA	33805092	33826731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_29736_18	chr17	+	1301	7	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	18500	5	2962	1	3prime_fragment	FALSE	canonical	3	43	junction_3	8.43932593411478	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGAAGTAAATTACT	2226	False	NA	NA	False	AATAAA	-14	NA	33820076	33826733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
Isoform_29737_9	chr17	+	1213	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	175.009206107057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTGGTACCTATG	4926	False	NA	24	True	AATACA	-14	NA	33848072	33850685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_33848191_33848595_33848673_33848754_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_29738_45	chr17	+	1206	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	2	3	2	-3	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4919	False	NA	26	True	AATACA	-16	NA	33848065	33850687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_29739_3	chr17	+	1650	4	ISM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	-8	-20	3	-6	intron_retention	FALSE	canonical	3	354	junction_1	39.2031744746377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGACTGGTACCTAT	4920	False	NA	23	True	AATACA	-13	NA	33848066	33850684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549
Isoform_2974_4	chr10	+	3209	19	NNC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	23.596662245661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGCAGATGTATATAT	NA	False	NA	16	True	AATAAA	-21	NA	69761664	69851636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851399
Isoform_29740_204	chr17	+	1128	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	3	66	3	-3	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4920	False	NA	26	True	AATACA	-16	NA	33848066	33850687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_29741_3	chr17	+	1934	3	NIC	ENSMUSG00000073423.11	novel	1544	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	354	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4926	False	NA	26	True	AATACA	-16	NA	33848072	33850687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_33848191_33848770_33849449_33849549
Isoform_29742_5	chr17	+	1611	6	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	2	-3	intron_retention	FALSE	canonical	3	63	junction_1	143.215920902671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4919	False	NA	26	True	AATACA	-16	NA	33848065	33850687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
Isoform_29743_4	chr17	+	2514	2	FSM	ENSMUSG00000073423.11	ENSMUST00000169781.2	470	2	-1102	-942	-2	-3	multi-exon	FALSE	canonical	3	400	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGGTACCTATGCC	4926	False	NA	26	True	AATACA	-16	NA	33848072	33850687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33849449_33849549
Isoform_29744_12	chr17	+	910	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	8	7	8	-7	multi-exon	FALSE	canonical	3	20	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTACCTCTCTGATTT	3485	False	NA	12	True	NA	NA	NA	33978973	33980837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_33979562_33980515
Isoform_29745_23	chr17	+	2632	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	5	4	2	0	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029498	34041888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
Isoform_29746_19	chr17	+	783	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	1	-1	1	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTATTGTGTGGATGGAA	NA	False	NA	13	True	AATAAA	-16	NA	34029497	34041892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
Isoform_2975_5	chr10	+	3816	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	46	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_18	20.5534233960282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761694	69860452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
Isoform_29751_46	chr17	+	318	2	FSM	ENSMUSG00000041881.14	ENSMUST00000173182.2	610	2	0	292	0	-15	multi-exon	FALSE	canonical	3	8081	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCCTAAATTTGC	4096	False	NA	-4	True	NA	NA	NA	34043567	34044805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34043655_34044574
Isoform_29754_2100	chr17	+	498	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	22	8	0	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4096	False	NA	25	True	AATATA	-16	NA	34043567	34057283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
Isoform_29756_106	chr17	+	426	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	12	0	3	0	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4118	False	NA	25	True	AATATA	-16	NA	34043589	34057283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34043655_34048640_34048791_34057072
Isoform_2976_6	chr10	+	2712	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	210	834	210	-834	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATGGGTTTCAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	70081139	70120964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
Isoform_29761_591	chr17	+	1160	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	28	1021	16	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7021	False	NA	23	True	ATTAAA	-16	NA	34062092	34067727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
Isoform_29763_7	chr17	+	1450	4	FSM	ENSMUSG00000002308.17	ENSMUST00000234506.2	1417	4	-33	0	17	0	multi-exon	FALSE	canonical	3	328	junction_3	11.8977121983832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7022	False	NA	23	True	ATTAAA	-16	NA	34062093	34067727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34062266_34064989_34065116_34066468_34067153_34067259
Isoform_29765_3	chr17	+	833	3	FSM	ENSMUSG00000092349.2	ENSMUST00000172817.2	807	3	-26	0	-26	0	multi-exon	FALSE	canonical	3	7	junction_1	58	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGTTCTGACTTAAAT	1233	False	NA	13	True	NA	NA	NA	34124082	34125649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34124169_34124501_34124892_34125292
Isoform_29770_32	chr17	+	2545	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	219.15347338785	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5642	False	NA	12	True	AATAAA	-23	NA	34128491	34134564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
Isoform_29772_1873	chr17	+	2507	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	74	0	21	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5643	False	NA	12	True	AATAAA	-23	NA	34128492	34134564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
Isoform_29774_32	chr17	+	2602	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	-21	0	10	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5548	False	NA	12	True	AATAAA	-23	NA	34128397	34134564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
Isoform_29779_68	chr17	+	2644	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
Isoform_29783_49	chr17	+	2553	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	220.781728022433	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5695	False	NA	12	True	AATAAA	-23	NA	34128544	34134564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
Isoform_29796_31	chr17	+	2562	2	FSM	ENSMUSG00000051390.11	ENSMUST00000174463.2	387	2	7	-2182	7	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCCCAACACCCC	NA	False	NA	10	True	ATTAAA	-19	NA	34134884	34138298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34134939_34135790
Isoform_29797_8	chr17	+	2600	2	FSM	ENSMUSG00000051390.11	ENSMUST00000174463.2	387	2	-30	-2183	-30	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	11	True	ATTAAA	-20	NA	34134847	34138299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34134939_34135790
Isoform_29798_191	chr17	+	2595	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	17	0	17	0	multi-exon	FALSE	canonical	3	107	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	11	True	ATTAAA	-20	NA	34135161	34138299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34135248_34135790
Isoform_29800_6	chr17	+	5492	9	Fusion	ENSMUSG00000051390.11_ENSMUSG00000024308.16	novel	2589	8	NA	NA	2	-3	multi-exon	FALSE	canonical	3	105	junction_7	48.9117508887179	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCGGGCCTCTCATTC	NA	False	NA	9	True	AATAAA	-14	NA	34135161	34148262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_29801_145	chr17	+	2596	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	298	4	-7	-3	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCGGGCCTCTCATTC	590	False	NA	9	True	AATAAA	-14	NA	34138603	34148262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_29802_53	chr17	+	2635	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	263	0	-42	0	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	555	False	NA	13	True	AATAAA	-18	NA	34138568	34148266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_29803_27	chr17	+	2754	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	142	2	-38	-1	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	434	False	NA	11	True	AATAAA	-16	NA	34138447	34148264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
Isoform_29805_148	chr17	+	2595	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-7	1	-7	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	590	False	NA	11	True	AATAAA	-16	NA	34138603	34148264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_29807_24	chr17	+	2751	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-163	1	-38	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	434	False	NA	11	True	AATAAA	-16	NA	34138447	34148264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
Isoform_29808_5	chr17	+	2743	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.6347559486145	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3552	False	NA	10	True	AATAAA	-16	NA	34148873	34156659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_34149020_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151536_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_29809_72	chr17	+	2932	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	319	1	-3	-1	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3553	False	NA	11	True	AATAAA	-17	NA	34148874	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_2981_5	chr10	+	3287	14	FSM	ENSMUSG00000043259.16	ENSMUST00000062883.7	3262	14	-25	0	-14	0	multi-exon	FALSE	canonical	3	12	junction_11	8.57062549069641	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9919	False	NA	NA	False	AATAAA	-16	NA	70276730	70394561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
Isoform_29811_25	chr17	+	3293	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	-42	1	-3	-1	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3192	False	NA	11	True	AATAAA	-17	NA	34148513	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_29813_14	chr17	+	2928	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.2465112005846	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3555	False	NA	11	True	AATAAA	-17	NA	34148876	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156040
Isoform_29816_3	chr17	+	3185	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_16	34.7993691573569	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3555	False	NA	11	True	AATAAA	-17	NA	34148876	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156040
Isoform_29817_3	chr17	+	2891	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	34.8407089480108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3543	False	NA	11	True	AATAAA	-17	NA	34148864	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_29818_4	chr17	+	5070	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	69	junction_1	17.3394972033593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3186	False	NA	11	True	AATAAA	-17	NA	34148507	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_2982_21	chr10	+	3666	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-20	-2154	-20	-1731	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGGAAGTTGCATA	2269	False	NA	8	True	AATAAA	-22	NA	71183645	71219984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
Isoform_29820_15	chr17	+	2746	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	4568	False	NA	11	True	AATAAA	-17	NA	34149889	34156660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_29821_12	chr17	+	2776	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	4536	False	NA	9	True	AATAAA	-15	NA	34149857	34156658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
Isoform_29824_1140	chr17	+	2208	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	4	17	-4	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	1140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTGTCTGGACCATCC	1996	False	NA	9	True	ATTAAA	-12	NA	34159650	34168667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
Isoform_2983_3	chr10	+	3766	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-121	-2153	-48	-1732	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2168	False	NA	7	True	AATAAA	-21	NA	71183544	71219983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
Isoform_29830_76	chr17	+	2570	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	270	543	137	519	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTCCTCTCCTTTG	NA	False	NA	16	True	NA	NA	NA	34175055	34185466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_29831_51	chr17	+	2785	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	56	542	-47	520	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTGTCCTCTCCTTTGT	NA	False	NA	17	True	NA	NA	NA	34174841	34185467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_29832_4	chr17	+	3119	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	261	3	128	-3	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACTGTGATTTTGTAC	NA	False	NA	28	True	NA	NA	NA	34175046	34186006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_29834_3	chr17	+	2879	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	-44	548	-44	514	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34174741	34185461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_29835_5	chr17	+	2818	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	129	522	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34175047	34185469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
Isoform_29836_206	chr17	+	2638	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	-14	3	-14	1	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250771	34257368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
Isoform_29839_212	chr17	+	2626	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-54	5	-14	1	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34250771	34257368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_2984_9	chr10	+	1322	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	0	1	0	-1	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTATGTAAAGCTGC	2289	False	NA	NA	False	AATAAA	-13	NA	71183665	71213245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
Isoform_29846_46	chr17	+	2328	10	FSM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	173	1	-32	1	multi-exon	FALSE	canonical	3	20	junction_1	72.5503656472905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34251342	34257368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
Isoform_29847_34	chr17	+	2316	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	-32	-1	-32	1	multi-exon	FALSE	canonical	3	20	junction_1	64.8690989609074	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCATTTTCTGGACT	NA	False	NA	16	True	CATAAA	-16	NA	34251342	34257368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
Isoform_2985_75	chr10	+	3641	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	73	1733	0	-1733	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2289	False	NA	6	True	AATAAA	-20	NA	71183665	71219982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_29852_14	chr17	+	1115	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	-27	20	-27	2	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGACCTCTCCCTCC	6771	False	NA	8	True	AATAAA	-16	NA	34354574	34358054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
Isoform_29853_8	chr17	+	3010	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	-60	3	-60	2	multi-exon	FALSE	canonical	0	0	junction_8	3.91024295920343	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTCTCCCGTTTCTTA	6931	False	NA	NA	False	AATAAA	-17	NA	34406466	34416196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
Isoform_29857_10	chr17	+	1173	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	31	8	-10	1	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGATTTGGCTTTGAT	NA	False	NA	4	True	NA	NA	NA	34482213	34488385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
Isoform_29858_4	chr17	+	1086	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1472	9	1350	0	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGATTTGGCTTTGA	NA	False	NA	3	True	NA	NA	NA	34483654	34488384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
Isoform_29859_48	chr17	+	1187	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	5	477	5	-2	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTGCTTCATAGAGTTT	NA	False	NA	10	True	AATAAA	-14	NA	34524845	34535171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_2986_27	chr10	+	3730	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	-16	1733	-16	-1733	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2200	False	NA	6	True	AATAAA	-20	NA	71183576	71219982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_29860_72	chr17	+	1158	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	35	476	-24	-1	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTTCATAGAGTTTC	NA	False	NA	11	True	AATAAA	-15	NA	34524875	34535172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_29861_3	chr17	+	1120	6	FSM	ENSMUSG00000060586.12	ENSMUST00000236232.2	1082	6	-43	5	16	-5	multi-exon	FALSE	canonical	2	14	junction_1	73.665731517443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATCTGCTTCATAGAG	NA	False	NA	7	True	AATAAA	-11	NA	34524856	34535168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34525022_34528617_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_29862_4	chr17	+	1133	5	FSM	ENSMUSG00000060586.12	ENSMUST00000235501.2	782	5	-104	-247	-104	0	multi-exon	FALSE	canonical	3	177	junction_1	12.5896783120142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34528444	34535173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
Isoform_29863_19	chr17	+	2191	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	18	859	18	-66	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCTTTTTAATTGTTT	NA	False	NA	8	True	AAGAAA	-16	NA	34811254	34815515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_29864_7	chr17	+	2391	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-52	729	-52	64	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCACTTGAGAAGTAAG	NA	False	NA	30	True	AATAAA	-20	NA	34811184	34815645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_29865_10	chr17	+	3076	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-6	-2	-6	2	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGAGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-22	NA	34811230	34816376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
Isoform_29867_3	chr17	+	2056	7	FSM	ENSMUSG00000034254.18	ENSMUST00000173973.8	1105	7	29	-980	29	5	multi-exon	FALSE	canonical	1	5	junction_3	44.7688507781917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTGCGGCCTGTTGT	NA	False	NA	18	True	AATAAA	-18	NA	34824863	34832397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34825146_34829418_34829619_34829845_34829901_34830247_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_29868_129	chr17	+	2147	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	29	14	29	-13	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTACTTCAGTGGTT	NA	False	NA	30	True	AATAAA	-30	NA	34824863	34832409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_29869_4	chr17	+	2414	6	NIC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	29	-14	intron_retention	FALSE	canonical	3	118	junction_1	5.38887743412299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTACTTCAGTGGT	NA	False	NA	29	True	AATAAA	-29	NA	34824863	34832408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_34825146_34829418_34829619_34829845_34830424_34830578_34830675_34830764_34830841_34831226
Isoform_29870_24	chr17	+	1201	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	69	0	-8	0	multi-exon	FALSE	canonical	3	34	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7428	False	NA	4	True	ATTAAA	-17	NA	34863806	34865298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34863928_34864218
Isoform_29874_1099	chr17	+	2486	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	74	6	9	-6	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGGCGGCCACCTTC	9815	False	NA	5	True	AATAAA	-18	NA	34866193	34874042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
Isoform_29875_203	chr17	+	2556	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	4	6	4	-6	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGGCGGCCACCTTC	9745	False	NA	5	True	AATAAA	-18	NA	34866123	34874042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
Isoform_29883_43	chr17	+	1434	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	11	2	11	-2	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTGCTGTGTCTGAA	2987	False	NA	28	True	AATAAA	-17	NA	35056005	35058160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_29884_4	chr17	+	1537	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGTCTCTTGCTGTGTC	2969	False	NA	24	True	AATAAA	-13	NA	35055987	35058156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_29885_10	chr17	+	1446	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	20	53	20	-6	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGTCTCTTGCTGTGTC	2996	False	NA	24	True	AATAAA	-13	NA	35056014	35058156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_29887_5	chr17	+	1600	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	23	0	intron_retention	FALSE	canonical	3	143	junction_2	17.7696370249929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2999	False	NA	30	True	AATAAA	-19	NA	35056017	35058162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_29888_3	chr17	+	1700	5	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	152	junction_1	16.3458710382775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2988	False	NA	30	True	AATAAA	-19	NA	35056006	35058162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
Isoform_29889_39	chr17	+	1399	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	-18	0	-1	0	multi-exon	TRUE	canonical	3	201	junction_1	101.735146335964	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	31	False	NA	NA	False	AAAAAG	-13	NA	35069365	35075348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_29890_113	chr17	+	1268	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	113	0	5	multi-exon	FALSE	canonical	3	201	junction_1	101.735146335964	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCAGCCTCTAGTCTTT	4	True	NA	35	True	AGTAAA	-25	NA	35069383	35075235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_29892_78	chr17	+	1507	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	-118	0	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	4	True	NA	NA	False	AAAAAG	-13	NA	35069383	35075348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_29893_209	chr17	+	1396	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	-7	0	7	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	4	True	NA	37	True	AGTAAA	-27	NA	35069383	35075237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_29894_11	chr17	+	1444	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	47	116	30	-1	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTCCGTCAGCCTCTA	4	True	NA	29	True	AGTAAA	-19	NA	35069413	35075229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
Isoform_29899_14	chr17	+	2031	2	FSM	ENSMUSG00000049823.10	ENSMUST00000052778.10	1858	2	-194	21	-194	-21	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAGGGAAAAAAAAAAAA	2566	False	NA	5	True	CATAAA	-13	NA	35113340	35115822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35113746_35114196
Isoform_29900_17	chr17	+	1845	2	FSM	ENSMUSG00000049823.10	ENSMUST00000052778.10	1858	2	-8	21	-8	-21	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAGGGAAAAAAAAAAAA	2752	False	NA	5	True	CATAAA	-13	NA	35113526	35115822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35113746_35114196
Isoform_29901_6	chr17	+	3895	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6683	False	NA	15	True	AATAAA	-16	NA	35117457	35133023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29902_89	chr17	+	3864	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	13	5	13	-1	multi-exon	TRUE	canonical	3	141	junction_1	79.9703820344975	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	6683	False	NA	14	True	AATAAA	-15	NA	35117457	35133022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29903_3	chr17	+	3738	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_23	100.300406767037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTGGTGATTGTTTC	6696	False	NA	17	True	AATAAA	-18	NA	35117470	35133025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29904_56	chr17	+	3762	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-17	1	13	-1	multi-exon	FALSE	canonical	3	123	junction_9	83.6524314646073	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	6683	False	NA	14	True	AATAAA	-15	NA	35117457	35133022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29906_17	chr17	+	4022	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	-1	5	-1	-1	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	7171	False	NA	14	True	AATAAA	-15	NA	35117945	35133022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29908_12	chr17	+	3920	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	16	-2	-1	-1	multi-exon	FALSE	canonical	3	123	junction_8	74.3555135817109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	7171	False	NA	14	True	AATAAA	-15	NA	35117945	35133022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29910_27	chr17	+	1022	5	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	12235	5	231	-1	3prime_fragment	FALSE	canonical	3	414	junction_3	11.4972822875669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	1752	False	NA	14	True	AATAAA	-15	NA	35130181	35133022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
Isoform_29911_5	chr17	+	2290	21	FSM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	-27	-2	-23	2	multi-exon	TRUE	non_canonical	1	2	junction_1	7.56240702422185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATGGCTTTATTTTCA	1252	False	NA	NA	False	ATTAAA	-25	NA	35133418	35149334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35133497_35135622_35135672_35136293_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_29912_4	chr17	+	2203	19	ISM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	2806	0	-443	0	3prime_fragment	FALSE	non_canonical	1	3	junction_2	7.25313895436714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATGGCTTTATTTT	144	False	NA	NA	False	ATTAAA	-23	NA	35136251	35149332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_29913_16	chr17	+	2218	18	FSM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	-54	82	-54	-2	multi-exon	FALSE	non_canonical	1	4	junction_1	7.17888098382546	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	66	False	NA	NA	False	ATTAAA	-21	NA	35136640	35149330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35136853_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_29914_4	chr17	+	1125	8	ISM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	9844	83	9844	-3	3prime_fragment	FALSE	canonical	3	13	junction_4	6.91641053537726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGTTTATGGCTTTAT	4233	False	NA	NA	False	ATTAAA	-20	NA	35146538	35149329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
Isoform_29917_7	chr17	+	2455	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	20	-1	20	1	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7943	False	NA	NA	False	NA	NA	NA	35150248	35154898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_29918_23	chr17	+	2424	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	81	-31	20	-1	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGATTCGGGCTGCGTT	8004	False	NA	NA	False	NA	NA	NA	35150309	35154928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_29919_31	chr17	+	1869	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	1	604	1	-604	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	7924	False	NA	9	True	NA	NA	NA	35150229	35154293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_29920_138	chr17	+	1752	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	116	606	55	-606	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCGTTTGTGGAGTC	8039	False	NA	7	True	NA	NA	NA	35150344	35154291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
Isoform_29921_25	chr17	+	2928	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	55	636	55	-604	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	8039	False	NA	9	True	NA	NA	NA	35150344	35154293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
Isoform_29922_4	chr17	+	3011	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	-36	644	25	-612	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGAAAAAGCGTTTGT	7948	False	NA	1	True	NA	NA	NA	35150253	35154285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
Isoform_29924_13	chr17	+	3025	4	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	55	-604	intron_retention	FALSE	canonical	3	122	junction_1	26.5120517668642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTTGTGGAGTCTG	8039	False	NA	9	True	NA	NA	NA	35150344	35154293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35150524_35150891_35151085_35151541_35153482_35153580
Isoform_29925_967	chr17	+	841	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-2	1	-2	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	-8	True	NA	25	True	AATAAA	-19	NA	35200853	35204866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_29928_24	chr17	+	771	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174241.8	521	4	-33	-217	-2	-1	multi-exon	FALSE	canonical	3	88	junction_1	766.950237412224	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTGGTTTGTCGTCT	-8	True	NA	23	True	AATAAA	-17	NA	35200853	35204864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35201062_35204084_35204116_35204224_35204285_35204392
Isoform_2993_9	chr10	+	5413	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	33	1	33	-1	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTCCGTTGATTAGCA	2249	False	NA	3	True	ATTAAA	-16	NA	71183625	71221714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
Isoform_29930_192	chr17	+	839	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	33	1	3	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	276	False	NA	25	True	AATAAA	-19	NA	35201137	35204866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_29932_13	chr17	+	1091	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	-7	-393	3	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	276	False	NA	25	True	AATAAA	-19	NA	35201137	35204866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
Isoform_29943_286	chr17	+	4209	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	-68	-4	-68	4	multi-exon	TRUE	canonical	0	0	junction_12	417.564149877336	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9406	False	NA	14	True	AATAAA	-15	NA	35219894	35235302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_29944_648	chr17	+	4074	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	67	-4	3	4	multi-exon	FALSE	canonical	0	0	junction_12	417.564149877336	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9541	False	NA	14	True	AATAAA	-15	NA	35220029	35235302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_29945_698	chr17	+	4005	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	136	-4	72	4	multi-exon	FALSE	canonical	0	0	junction_12	417.564149877336	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9610	False	NA	14	True	AATAAA	-15	NA	35220098	35235302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_2995_13	chr10	+	2052	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	0	624	0	0	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490726	72504997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
Isoform_29952_293	chr17	+	3967	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	354	-5	24	5	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTGTCTGTGTGGTG	10	True	NA	15	True	AATAAA	-16	NA	35220316	35235303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_29953_199	chr17	+	3998	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	322	-4	-8	4	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	-3	True	NA	14	True	AATAAA	-15	NA	35220284	35235302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
Isoform_2996_134	chr10	+	1154	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-16	0	-15	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490711	72504997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
Isoform_2997_5	chr10	+	1816	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-52	-626	-1	2	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACGTGTTTAGTTGCT	NA	False	NA	NA	False	TATAAA	-34	NA	72490675	72505623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
Isoform_2998_308	chr10	+	1795	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	35	4	-15	-4	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72490711	72510792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
Isoform_29985_400	chr17	+	1168	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	268	30	268	-30	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAATCTAGTGTTGTT	1944	False	NA	NA	False	AATAAA	-11	NA	35269209	35277695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
Isoform_29988_14	chr17	+	1283	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	-30	1	-30	-1	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTGACTGGTTTCTC	NA	False	NA	16	True	AATAAA	-22	NA	35278046	35281070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
Isoform_2999_11	chr10	+	2508	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	-19	1030	-19	-1021	multi-exon	TRUE	canonical	3	7	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	74802989	74851709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
Isoform_29990_409	chr17	+	1278	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	67	-3	1	-1	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTGACTGGTTTCTC	NA	False	NA	16	True	AATAAA	-22	NA	35278077	35281070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
Isoform_29992_26	chr17	+	1230	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	24	1	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCTGTGACTGGTTTC	NA	False	NA	14	True	AATAAA	-20	NA	35278815	35281068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
Isoform_29995_41	chr17	+	1046	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-49	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295828	35297775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
Isoform_29997_37	chr17	+	1020	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-21	-249	8	-5	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295885	35297775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
Isoform_29998_22	chr17	+	1077	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-78	-249	-49	-5	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295828	35297775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
Isoform_30001_21	chr17	+	1180	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	-43	5	-8	-5	multi-exon	FALSE	canonical	3	419	junction_2	34.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTTAAGAGAGCTGT	NA	False	NA	15	True	NA	NA	NA	35295869	35297775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35296183_35296812_35296939_35297034
Isoform_30003_21	chr17	+	2159	21	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	48.0332176727731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308240	35321962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
Isoform_30004_870	chr17	+	1965	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-21	1	7	-1	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308245	35321962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
Isoform_30005_10	chr17	+	2041	20	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	38.9519200754254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308218	35321962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320754_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
Isoform_30008_8	chr17	+	694	3	FSM	ENSMUSG00000034482.3	ENSMUST00000037849.3	509	3	-8	-177	-8	177	multi-exon	TRUE	canonical	2	3	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTTGTCGTCTCCTCT	6703	False	NA	NA	False	AATAAA	-11	NA	35327246	35331144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35327397_35329642_35329808_35330765
Isoform_30009_30	chr17	+	1259	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4601	False	NA	15	True	AATAAA	-15	NA	35340470	35343791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35340527_35342028_35342636_35343195
Isoform_30010_44	chr17	+	1231	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35340527_35342028_35342636_35343195
Isoform_30011_4	chr17	+	1713	4	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	36	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	41.0203201677738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTTTACTTTCTTGA	4625	False	NA	13	True	AATAAA	-13	NA	35340494	35343789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35340775_35341204_35341437_35342028_35342636_35343195
Isoform_30012_47	chr17	+	1479	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	40	-1	40	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35340775_35342028_35342636_35343195
Isoform_30014_10	chr17	+	2733	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	-1429	-9	40	1	multi-exon	FALSE	canonical	3	88	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35342636_35343195
Isoform_30016_47	chr17	+	3926	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	131.268238351857	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8525	False	NA	29	True	AATAAA	-30	NA	35354190	35366295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30017_9	chr17	+	3761	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	169.610455447836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGTTTCGAGTACCTTT	8540	False	NA	26	True	AATAAA	-27	NA	35354205	35366292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_30019_10	chr17	+	3912	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	185.397242697943	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8525	False	NA	17	True	AATAAA	-18	NA	35354190	35366283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365003_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30021_77	chr17	+	3919	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTAGTTTCGAGTACCTT	8525	False	NA	25	True	AATAAA	-26	NA	35354190	35366291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30022_16	chr17	+	3779	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	156.645809781884	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8523	False	NA	30	True	AATAAA	-31	NA	35354188	35366296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_30025_6	chr17	+	3754	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	203.064196027595	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8533	False	NA	17	True	AATAAA	-18	NA	35354198	35366283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365003_35365146_35365221_35365330_35366116
Isoform_30026_16	chr17	+	3814	25	FSM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	29	15	2	1	multi-exon	FALSE	canonical	3	186	junction_11	162.018431736091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8517	False	NA	17	True	AATAAA	-18	NA	35354182	35366283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30027_5	chr17	+	3812	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	208.637806677026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCGAGTACCTTTTC	8528	False	NA	28	True	AATAAA	-29	NA	35354193	35366294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365003_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30028_24	chr17	+	3822	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	147.653539437202	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8520	False	NA	31	True	AATAAA	-32	NA	35354185	35366297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30029_5	chr17	+	3654	24	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	225.176897484357	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8523	False	NA	15	True	AATAAA	-16	NA	35354188	35366281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365003_35365146_35365221_35365330_35366116
Isoform_3003_25	chr10	+	6012	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	41	-1328	19	-8	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75047945	75148225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
Isoform_30032_6	chr17	+	3864	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	172.355233134619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTAGTAGTTTCGAGT	8521	False	NA	20	True	AATAAA	-21	NA	35354186	35366286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30034_13	chr17	+	3798	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	138.874711880889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8798	False	NA	17	True	AATAAA	-18	NA	35354463	35366283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30037_50	chr17	+	3803	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCGAGTACCTTTTC	8801	False	NA	28	True	AATAAA	-29	NA	35354466	35366294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30038_8	chr17	+	3650	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	162.957624859962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8810	False	NA	31	True	AATAAA	-32	NA	35354475	35366297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
Isoform_30039_9	chr17	+	3818	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	179.72438454478	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGTTTCGAGTACCTTT	8782	False	NA	26	True	AATAAA	-27	NA	35354447	35366292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365003_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30040_8	chr17	+	3678	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	168.319388861375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8810	False	NA	17	True	AATAAA	-18	NA	35354475	35366283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30041_12	chr17	+	3670	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	154.706302168191	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTAGTAGTTTCGAG	8817	False	NA	19	True	AATAAA	-20	NA	35354482	35366285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
Isoform_30049_1724	chr17	+	1664	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	49	26	-10	1	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACCGTGTCTGTGGTGT	NA	False	NA	11	True	NA	NA	NA	35460770	35472657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
Isoform_30050_826	chr17	+	1686	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	27	26	-5	1	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACCGTGTCTGTGGTGT	NA	False	NA	11	True	NA	NA	NA	35460748	35472657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
Isoform_30052_131	chr17	+	3831	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	2129	junction_1	153.609975884895	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAACCGTGTCTGTGGT	NA	False	NA	9	True	NA	NA	NA	35460778	35472655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
Isoform_30064_3	chr17	+	1721	7	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	154	0	-8	intron_retention	FALSE	canonical	3	37	junction_3	6.9860973050449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAATTTGAAAGT	2085	False	NA	NA	False	NA	NA	NA	35482071	35486321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663
Isoform_30065_66	chr17	+	1585	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	151	0	-5	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATTTGAAAGTGAC	2085	False	NA	NA	False	NA	NA	NA	35482071	35486324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
Isoform_30066_10	chr17	+	1734	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	2	0	-2	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGGTCACTATGCTGT	2085	False	NA	24	True	AATAAA	-23	NA	35482071	35486473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
Isoform_30067_3	chr17	+	1568	5	NIC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	132	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.880895352071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAATAATTTGAAA	2217	False	NA	NA	False	NA	NA	NA	35482203	35486319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485841
Isoform_30069_4	chr17	+	1691	6	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	850	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_4	2.33238075793812	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5730	False	NA	NA	False	NA	NA	NA	35562067	35565738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564635_35564685_35564819
Isoform_30070_3	chr17	+	1436	6	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	2.93938769133981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGTGTCAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	35780985	35785456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35781077_35781272_35781543_35781722_35781999_35783979_35784256_35784382_35784487_35785037
Isoform_30071_690	chr17	+	1364	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	-4	2	-4	-2	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTGAATTTTGTTTTC	3032	False	NA	-2	True	AATAAA	-18	NA	35816910	35821667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
Isoform_30072_2731	chr17	+	1341	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	19	2	19	-2	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTGAATTTTGTTTTC	3055	False	NA	-2	True	AATAAA	-18	NA	35816933	35821667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
Isoform_3008_1040	chr10	+	652	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	467	1917	4	46	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGAGGCTTTTTTGT	1869	False	NA	31	True	AATAAA	-18	NA	75353851	75371298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
Isoform_30087_3	chr17	+	2713	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	26	9	26	1	multi-exon	FALSE	canonical	1	1	junction_1	38.8088461978693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4534	False	NA	21	True	AATAAA	-23	NA	35828098	35841903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_30089_48	chr17	+	2709	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	-43	-10	-43	1	multi-exon	TRUE	canonical	3	44	junction_1	24.5503507751598	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4389	False	NA	21	True	AATAAA	-23	NA	35827953	35841903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_30090_4	chr17	+	2362	17	NIC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	36.9797241742012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4522	False	NA	21	True	AATAAA	-23	NA	35828086	35841903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35828127_35829113_35829181_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_30091_4	chr17	+	3219	18	ISM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	81	9	81	1	3prime_fragment	FALSE	canonical	3	17	junction_1	29.5544772924118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4589	False	NA	21	True	AATAAA	-23	NA	35828153	35841903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
Isoform_30093_25	chr17	+	1123	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	2	6	2	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCTCGAAGTGTA	NA	False	NA	10	True	AATAAA	-23	NA	36132577	36133809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36132821_36132929
Isoform_30095_125	chr17	+	1695	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	127	3	10	-3	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATACTTCTTTCCTC	NA	False	NA	22	True	ATTAAA	-20	NA	36134248	36143680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_30096_5	chr17	+	1623	12	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	49.9444319318153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATCTATACTTCTTTCC	NA	False	NA	20	True	ATTAAA	-18	NA	36134227	36143678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_30097_3	chr17	+	1635	13	NIC	ENSMUSG00000059714.14	novel	651	8	NA	NA	-16	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.6198986939131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTATACTTCTTTCCT	NA	False	NA	21	True	ATTAAA	-19	NA	36134401	36143679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_36134488_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_30098_5	chr17	+	776	4	FSM	ENSMUSG00000059714.14	ENSMUST00000173381.8	502	4	-114	-160	-114	-5	multi-exon	FALSE	canonical	3	201	junction_3	7.31816613336672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATCTATACTTCTTTCC	NA	False	NA	20	True	ATTAAA	-18	NA	36140863	36143678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36141057_36141545_36141684_36141834_36142000_36143398
Isoform_30099_302	chr17	+	1448	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	16	2	-4	-2	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4605	False	NA	22	True	AATAAA	-16	NA	36172225	36176292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
Isoform_30101_7	chr17	+	1251	3	FSM	ENSMUSG00000059791.15	ENSMUST00000172931.2	302	3	-152	-797	-4	-2	multi-exon	FALSE	canonical	1	2	junction_1	132.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACTTGTCTGTCCATG	4605	False	NA	22	True	AATAAA	-16	NA	36172225	36176292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36172410_36175003_36175181_36175402
Isoform_30102_12	chr17	+	2636	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	105	2	105	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	9432	False	NA	13	True	AATAAA	-20	NA	36177052	36186486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_30103_8	chr17	+	2720	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	23	0	23	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9350	False	NA	15	True	AATAAA	-22	NA	36176970	36186488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_30105_4	chr17	+	2994	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	-253	2	178	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	9074	False	NA	13	True	AATAAA	-20	NA	36176694	36186486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
Isoform_30106_12	chr17	+	3176	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	7	2	7	0	multi-exon	FALSE	canonical	3	80	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	9893	False	NA	13	True	AATAAA	-20	NA	36177513	36186486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36179678_36184617_36184832_36185688
Isoform_30107_4	chr17	+	3970	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	-794	9	196	0	multi-exon	FALSE	canonical	3	80	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTTGCTGCCTTC	9092	False	NA	6	True	AATAAA	-13	NA	36176712	36186479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36179678_36184617_36184832_36185688
Isoform_3011_148	chr10	+	2263	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75399939	75422034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30110_383	chr17	+	3356	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	-10	5	-10	-1	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCTGCCTTATGTCAT	NA	False	NA	47	True	AATGAA	-37	NA	36190700	36203557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
Isoform_30118_12	chr17	+	1032	6	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	1016	junction_3	64.0387382761403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCTGCCTTATGTCA	7430	False	NA	46	True	AATGAA	-36	NA	36198875	36203556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
Isoform_30119_7	chr17	+	3760	2	FSM	ENSMUSG00000039220.17	ENSMUST00000133641.2	1385	2	209	-2584	-7	2584	multi-exon	FALSE	canonical	3	113	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36227882	36231834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_36227898_36228089
Isoform_30122_47	chr17	+	4241	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGGTATGTTTCACTT	NA	False	NA	27	True	AATAAA	-27	NA	36227877	36243174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
Isoform_30128_5	chr17	-	178	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTCATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35798637	35798459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35798500_35798600
Isoform_30129_5	chr17	-	170	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35800526	35800356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35800400_35800500
Isoform_3013_4	chr10	+	2396	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-83	0	intron_retention	FALSE	canonical	0	0	junction_2	97.8393805106013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75399898	75422025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
Isoform_30133_3	chr17	-	2110	1	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-9	144	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAACAAATGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	35984604	35982494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_35982500_35984600
Isoform_3014_52	chr10	+	2253	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75399939	75422027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30158_6	chr17	+	873	1	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-17	-3500	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	9373	False	NA	NA	False	NA	NA	NA	36152550	36153423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_36152600_36153400
Isoform_3016_4	chr10	+	2410	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-92	-1	intron_retention	FALSE	canonical	0	0	junction_2	108.76580344943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTGTCTTGTGTATG	NA	False	NA	35	True	NA	NA	NA	75399889	75422033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
Isoform_30164_5	chr17	-	1331	1	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	-4167	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	36280643	36279312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_36279300_36280600
Isoform_3017_4	chr10	+	2349	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	420	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	94.4407393789241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGACTTTAGTGTCTTG	NA	False	NA	29	True	NA	NA	NA	75400408	75422027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30170_21	chr17	+	688	1	NIC	ENSMUSG00000024457.17	novel	522	2	NA	NA	-11	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCACCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37148053	37148741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_37148100_37148700
Isoform_30171_6	chr17	+	184	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAGATGCTTA	NA	False	NA	NA	False	NA	NA	NA	37246096	37246280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_37246100_37246300
Isoform_30172_7	chr17	-	278	1	ISM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	7	5192	7	-1756	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37300422	37300144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_37300100_37300400
Isoform_30177_7	chr17	+	905	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	38306756	38307661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_38306800_38307700
Isoform_3018_4	chr10	+	2342	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	422	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	106.546931071289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75400410	75422025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30180_200	chr17	+	4169	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3354	1034	-3354	-1034	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGAGTGTTCAAAG	NA	False	NA	-47	True	NA	NA	NA	40153889	40158058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40153900_40158100
Isoform_3019_45	chr10	+	2158	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.9111987943607	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404467	75422034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75404601_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30190_6	chr17	-	2623	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTACCTTCTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	40156510	40153887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_40153900_40156500
Isoform_3020_16	chr10	+	2155	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	102.693604140477	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404467	75422034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75404601_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_3021_13	chr10	+	2153	14	FSM	ENSMUSG00000006345.11	ENSMUST00000134503.8	2140	14	-22	9	0	0	multi-exon	FALSE	canonical	3	144	junction_1	59.3897965057474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75404467	75422025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75404605_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_3022_9	chr10	+	2159	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	78.6791101046771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404467	75422034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75404605_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30228_5	chr17	-	2337	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGACGAGAGAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	40157256	40154919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_40154900_40157300
Isoform_3023_13	chr10	+	2351	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.7702044712644	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75404467	75422024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_3025_7	chr10	+	2355	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	79.6660931044854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTAGTGTCTTGTGTA	NA	False	NA	33	True	NA	NA	NA	75404467	75422031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75404804_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_30257_4	chr17	-	2008	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAGAACGAGGGCCGG	NA	False	NA	NA	False	AAAAAG	-33	NA	40157769	40155761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_40155800_40157800
Isoform_3026_4	chr10	+	1322	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	-4	3	-4	-3	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTGACTCAATATGTT	NA	False	NA	NA	False	NA	NA	NA	75729242	75731772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
Isoform_3028_5419	chr10	+	634	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	327	-22	327	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	5419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
Isoform_30305_3298	chr17	+	814	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	1034	1	-1034	mono-exon	FALSE	NA	NA	NA	NA	NA	3298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGAGTGTTCAAAG	NA	False	NA	-47	True	NA	NA	NA	40157244	40158058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40157200_40158100
Isoform_30307_974	chr17	+	1187	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	661	1	-661	mono-exon	FALSE	NA	NA	NA	NA	NA	974	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTGAAACTTAAAGGAAT	NA	False	NA	31	True	NA	NA	NA	40157244	40158431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40157200_40158400
Isoform_30309_1263	chr17	+	1033	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1	815	1	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	1263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGAAAGTCGGAGTTTC	NA	False	NA	39	True	NA	NA	NA	40157244	40158277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40157200_40158300
Isoform_30336_3	chr17	-	541	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATTTGCGCGCCTGC	NA	False	NA	NA	False	NA	NA	NA	40158284	40157743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_40157700_40158300
Isoform_30355_5	chr17	+	371	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1431	47	1431	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGTAACAAGGTTTCC	NA	False	NA	11	True	NA	NA	NA	40158674	40159045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40158700_40159000
Isoform_30357_6	chr17	+	309	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	1493	47	1493	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCGTAACAAGGTTTCC	NA	False	NA	11	True	NA	NA	NA	40158736	40159045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_40158700_40159000
Isoform_30372_6	chr17	+	5177	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	40489662	40494839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_40489700_40494800
Isoform_30374_4	chr17	-	176	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	41057691	41057515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_41057500_41057700
Isoform_3038_21	chr10	+	4660	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	22	415	22	-415	multi-exon	FALSE	canonical	3	112	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	75868509	75878653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75868584_75874067
Isoform_30381_3	chr17	-	993	1	NIC	ENSMUSG00000079471.5	novel	804	2	NA	NA	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGTGGTGGTGGCTTT	NA	False	NA	-8	True	AATAAA	-17	NA	45912892	45911899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45911900_45912900
Isoform_30382_6	chr17	-	2789	1	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-25	2850	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	45997088	45994299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_45994300_45997100
Isoform_30384_4	chr17	-	326	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACTTTTGAAAAA	8685	False	NA	NA	False	NA	NA	NA	46144845	46144519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_46144500_46144800
Isoform_30385_5	chr17	-	284	1	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	46291392	46291108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_46291100_46291400
Isoform_30386_5	chr17	+	1080	1	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-1	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAAATAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	46471973	46473053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_46472000_46473100
Isoform_30387_10	chr17	+	1018	1	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	1	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	46472037	46473055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_46472000_46473100
Isoform_30388_8	chr17	-	214	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATGTCCTTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	46496281	46496067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_46496100_46496300
Isoform_30389_12	chr17	-	2125	1	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-20	-602	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46558914	46556789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46556800_46558900
Isoform_3039_17	chr10	+	4700	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-18	415	-14	-415	multi-exon	FALSE	canonical	3	112	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	75868469	75878653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_75868584_75874067
Isoform_30390_3	chr17	-	517	1	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	1	-2923	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7139	False	NA	NA	False	GATAAA	-10	NA	46638922	46638405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_46638400_46638900
Isoform_30391_6	chr17	+	172	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	46869876	46870048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_46869900_46870000
Isoform_30394_79	chr17	+	582	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	180	0	180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAACTTGGCAGTCGTT	NA	False	NA	10	True	GATAAA	-18	NA	47083740	47084322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47083700_47084300
Isoform_30399_5	chr17	-	1184	1	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	47201324	47200140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_47200100_47201300
Isoform_30400_19	chr17	+	1231	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-68	1	-68	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTGGTTTGGCCTTC	5239	False	NA	20	True	ATTAAA	-20	NA	47201541	47202772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47201500_47202800
Isoform_30401_23	chr17	+	1186	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-25	3	-25	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGCTGGTTTGGCCT	5282	False	NA	18	True	ATTAAA	-18	NA	47201584	47202770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47201600_47202800
Isoform_30402_10	chr17	+	1344	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-25	-155	-25	155	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTAGCGGACGGTTT	5282	False	NA	19	True	AATAAA	-20	NA	47201584	47202928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47201600_47202900
Isoform_30403_4	chr17	+	2758	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-13	-1581	-13	1581	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAGAATAAA	5294	False	NA	NA	False	NA	NA	NA	47201596	47204354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_47201600_47204400
Isoform_30404_5	chr17	-	175	1	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47315136	47314961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_47315000_47315100
Isoform_30405_10	chr17	-	2510	1	NIC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	-2	-51388	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47321448	47318938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_47318900_47321400
Isoform_30406_3	chr17	-	301	1	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTGACAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47344394	47344093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_47344100_47344400
Isoform_30408_3	chr17	+	174	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47847970	47848144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_47848000_47848100
Isoform_3041_8	chr10	+	5035	2	NIC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-23	-415	intron_retention	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTGTCTTTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	75868460	75878653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75868910_75874067
Isoform_30413_9	chr17	-	186	1	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	47974098	47973912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_47973900_47974100
Isoform_30417_4	chr17	-	172	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGATAATCTTTTTTTAA	NA	False	NA	-15	True	NA	NA	NA	48115911	48115739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_48115700_48115900
Isoform_30418_5	chr17	+	177	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCAC	NA	False	NA	NA	False	NA	NA	NA	48222904	48223081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_48222900_48223100
Isoform_30419_8	chr17	+	221	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	326	False	NA	NA	False	NA	NA	NA	48248176	48248397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_48248200_48248400
Isoform_30420_6	chr17	-	2713	1	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	-5	-9096	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTTTAAAATC	NA	False	NA	NA	False	AATACA	-19	NA	48716763	48714050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_48714000_48716800
Isoform_30421_56	chr17	+	1337	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-140	-441	-140	441	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAAAGAATT	NA	False	NA	NA	False	AATAAA	-19	NA	51005575	51006912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_51005600_51006900
Isoform_30424_3	chr17	-	209	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGGCTAAATTCACACT	NA	False	NA	NA	False	AAGAAA	-15	NA	52964514	52964305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_52964300_52964500
Isoform_30425_17	chr17	+	981	1	FSM	ENSMUSG00000017831.9	ENSMUST00000233347.2	3226	1	-57	2302	-4	-2302	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGTTACA	NA	False	NA	NA	False	TTTAAA	-35	NA	53786257	53787238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_53786300_53787200
Isoform_30428_6	chr17	-	184	1	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTTTTTAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	53869716	53869532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_53869500_53869700
Isoform_30429_3	chr17	+	857	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGGAAGTAGACACA	NA	False	NA	NA	False	NA	NA	NA	54111204	54112061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_54111200_54112100
Isoform_3043_16	chr10	+	6447	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-20	0	-20	0	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76304740	76351691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_30433_7	chr17	-	173	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56398983	56398810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_56398800_56399000
Isoform_30434_3	chr17	-	180	1	Antisense	novelGene_ENSMUSG00000002833.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAACCCTCC	6304	False	NA	NA	False	NA	NA	NA	56406796	56406616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_56406600_56406800
Isoform_30435_77	chr17	+	3304	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	11	3486	11	-3486	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTAGCTGTTATTT	NA	False	NA	8	True	ATTAAA	-18	NA	56563820	56567124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56563800_56567100
Isoform_30437_4	chr17	+	4239	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	11	2551	11	-2551	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCCTCCCCCCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	56563820	56568059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_56563800_56568100
Isoform_30439_3	chr17	-	178	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	520	False	NA	NA	False	NA	NA	NA	56570986	56570808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_56570800_56571000
Isoform_30440_13	chr17	-	205	1	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCCCTCCTCCCCCAA	NA	False	NA	-5	True	NA	NA	NA	56571706	56571501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_56571500_56571700
Isoform_30442_3	chr17	+	611	1	Antisense	novelGene_ENSMUSG00000024197.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAACATTCTAGAAAAAAA	965	False	NA	NA	False	AAAACA	-38	NA	56585967	56586578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_+_56586000_56586600
Isoform_30448_3	chr17	+	553	1	Genic_Genomic	ENSMUSG00000024201.13	novel	NA	NA	NA	NA	-3	-29445	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCCTTAAAAATAAAAAAC	4894	False	NA	NA	False	NA	NA	NA	56633058	56633611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_56633100_56633600
Isoform_30449_3	chr17	-	3177	1	NIC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	5	-15593	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATAGCGCCTTG	NA	False	NA	NA	False	NA	NA	NA	56783384	56780207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_56780200_56783400
Isoform_3045_36	chr10	+	4140	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	12130	0	-61	0	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76316890	76351691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_30452_4	chr17	+	174	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56944015	56944189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_56944000_56944200
Isoform_30453_5	chr17	-	179	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTTCTAAAAT	4493	False	NA	NA	False	NA	NA	NA	56977647	56977468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_56977500_56977600
Isoform_30457_10	chr17	+	185	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGACC	NA	False	NA	NA	False	NA	NA	NA	57584821	57585006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_57584800_57585000
Isoform_30458_5	chr5	-	180	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACACGGC	NA	False	NA	NA	False	NA	NA	NA	102729896	102729716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_102729700_102729900
Isoform_30459_4	chr17	-	196	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATGCTTCGA	NA	False	NA	NA	False	NA	NA	NA	59421783	59421587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_59421600_59421800
Isoform_3046_7	chr10	+	4372	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	11898	0	-293	0	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76316658	76351691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_30460_4	chr17	+	591	1	Antisense	novelGene_ENSMUSG00000024091.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAGA	576	False	NA	NA	False	AATGAA	-36	NA	65887049	65887640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_+_65887000_65887600
Isoform_30461_4	chr17	-	178	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATGAG	NA	False	NA	NA	False	NA	NA	NA	66144620	66144442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66144400_66144600
Isoform_30462_6	chr17	-	151	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTGTCCTTTTCTT	NA	False	NA	-17	True	NA	NA	NA	66196184	66196033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66196000_66196200
Isoform_30463_3	chr17	-	174	1	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	66252127	66251953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66252000_66252100
Isoform_30465_11	chr17	-	278	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAATAAAAAAATAA	8842	False	NA	NA	False	NA	NA	NA	66410856	66410578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66410600_66410900
Isoform_30466_3	chr17	-	179	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	66635978	66635799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66635800_66636000
Isoform_30468_7	chr17	-	2045	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66791042	66788997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66789000_66791000
Isoform_3047_4	chr10	+	4451	23	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	59.3729632099542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76316947	76351688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_76317346_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
Isoform_30471_18	chr17	-	2767	1	Genic_Genomic	ENSMUSG00000100572.2	novel	NA	NA	NA	NA	2	922	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	69584201	69581434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_-_69581400_69584200
Isoform_30474_5	chr17	+	846	1	FSM	ENSMUSG00000073374.4	ENSMUST00000097289.3	1471	1	-63	688	-4	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTTACCCT	NA	False	NA	NA	False	AGTAAA	-10	NA	69724392	69725238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_69724400_69725200
Isoform_30475_6	chr17	-	181	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACTG	NA	False	NA	NA	False	NA	NA	NA	70136101	70135920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_70135900_70136100
Isoform_30476_4	chr17	+	518	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71058339	71058857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_+_71058300_71058900
Isoform_30478_3	chr17	-	380	1	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	9893	False	NA	NA	False	NA	NA	NA	71117737	71117357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_71117400_71117700
Isoform_30479_4	chr17	-	666	1	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71143997	71143331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_71143300_71144000
Isoform_30480_4	chr17	-	4468	1	NIC	ENSMUSG00000097154.3	novel	1796	3	NA	NA	1	-46176	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71231990	71227522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_71227500_71232000
Isoform_30485_5	chr4	-	195	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTTGGGGGGCATGGA	NA	False	NA	NA	False	NA	NA	NA	125974064	125973869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_125973900_125974100
Isoform_30494_26	chr17	+	215	1	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACGTATTGT	NA	False	NA	NA	False	AAAAAG	-12	NA	75268937	75269152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_75268900_75269200
Isoform_30497_21	chr17	+	1413	1	FSM	ENSMUSG00000061062.6	ENSMUST00000079363.6	1444	1	-31	62	-31	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGAAAACCAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	78798979	78800392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_78799000_78800400
Isoform_30498_3	chr17	+	299	1	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79019226	79019525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_79019200_79019500
Isoform_3050_276	chr10	+	3117	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	-2	1552	-2	694	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAACCACCTGCCTTCC	NA	False	NA	-1	True	AATAAA	-7	NA	76367438	76389761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
Isoform_30501_3	chr17	+	2565	2	Fusion	ENSMUSG00000117282.2_ENSMUSG00000090211.4	novel	599	3	NA	NA	16	-7659	intron_retention	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13414780	13723796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr17_+_13414803_13721253
Isoform_30502_3	chr17	-	552	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	9131	False	NA	NA	False	NA	NA	NA	79705946	79705394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_79705400_79705900
Isoform_30506_3	chr17	-	188	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80427920	80427732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_80427700_80427900
Isoform_30507_3	chr17	+	171	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	80498393	80498564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_80498400_80498600
Isoform_30509_10	chr17	+	187	1	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGACATTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	80532797	80532984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_80532800_80533000
Isoform_30510_4	chr17	+	171	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAGTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80584098	80584269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_80584100_80584300
Isoform_30511_6	chr17	-	883	1	FSM	ENSMUSG00000066938.2	ENSMUST00000086549.2	324	1	-14	-545	-14	545	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	80680984	80680101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_80680100_80681000
Isoform_30512_3	chr17	+	223	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTCTTTCTTTGTTTC	NA	False	NA	NA	False	AAGAAA	-12	NA	80797186	80797409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_80797200_80797400
Isoform_30514_3	chr17	-	275	1	FSM	ENSMUSG00000117438.2	ENSMUST00000234808.2	885	1	678	-68	678	68	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	82717570	82717295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_82717300_82717600
Isoform_30516_4	chr17	-	229	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGCAAGAAAAAGAGTAATA	NA	False	NA	NA	False	NA	NA	NA	82843447	82843218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_82843200_82843400
Isoform_30517_21	chr17	-	178	1	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAACCTGTC	NA	False	NA	NA	False	NA	NA	NA	83813235	83813057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_83813100_83813200
Isoform_30518_3	chr7	-	178	1	Intergenic	novelGene_1809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATATTTA	6158	False	NA	NA	False	NA	NA	NA	45050901	45050723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_45050700_45050900
Isoform_30519_27	chr17	+	178	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATATGCAACCA	NA	False	NA	NA	False	NA	NA	NA	85136482	85136660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_85136500_85136700
Isoform_3052_4	chr10	+	4582	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	10	75	5	-75	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAATAAATTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	76367450	76391238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
Isoform_30520_3	chr17	-	176	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATACATA	NA	False	NA	NA	False	NA	NA	NA	85465503	85465327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_85465300_85465500
Isoform_30521_35	chr17	-	697	1	NIC	ENSMUSG00000048826.8	novel	3250	4	NA	NA	320	-5255	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	14424036	14423339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_14423300_14424000
Isoform_30522_6	chr17	+	942	1	FSM	ENSMUSG00000036918.17	ENSMUST00000234468.2	868	1	-75	1	-13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTAGACCGATGCGTT	NA	False	NA	NA	False	AATAAA	-25	NA	87590300	87591242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_87590300_87591200
Isoform_30526_4	chr17	+	181	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	88096482	88096663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_88096500_88096700
Isoform_30527_5	chr17	-	1095	1	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88282333	88281238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_88281200_88282300
Isoform_30528_19	chr17	+	1745	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	-2	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATAAATCAACTTGAT	NA	False	NA	-6	True	NA	NA	NA	15163489	15165234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_15163500_15165200
Isoform_30529_4	chr17	+	2712	1	Genic_Genomic	ENSMUSG00000050088.10	novel	NA	NA	NA	NA	-4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCTGTTACTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	15163487	15166199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_15163500_15166200
Isoform_30530_3	chr17	+	178	1	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAGAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	88393824	88394002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_88393800_88394000
Isoform_30531_4	chr17	+	176	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88398919	88399095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_88398900_88399100
Isoform_30532_4	chr17	-	177	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTCATCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	88949875	88949698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_88949700_88949900
Isoform_30533_1805	chr17	-	1968	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	7	13	7	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	1805	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	90217870	90215902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_90215900_90217900
Isoform_30534_8	chr11	-	1969	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	78	7	-13	-7	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9744	False	NA	NA	False	AATAAA	-20	NA	106890289	106879461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
Isoform_3054_27	chr10	+	2259	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	45	5	45	-4	multi-exon	FALSE	canonical	0	0	junction_2	43.968170305347	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	12	True	ATTAAA	-14	NA	76868562	76886261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_30540_5	chr17	+	202	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCCAGGGAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	92619507	92619709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_92619500_92619700
Isoform_30541_12	chr17	+	5123	2	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990130	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992660_94992700
Isoform_30543_6	chr17	+	4150	2	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94991095	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992676_94992724
Isoform_30548_3	chr17	+	3321	2	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94991932	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992678_94992718
Isoform_30549_3	chr17	+	3255	2	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94991998	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992678_94992718
Isoform_3055_226	chr10	+	2304	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	38	5	-18	-5	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869083	76886260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_30551_9	chr17	+	3098	2	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992147	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992676_94992724
Isoform_30552_4	chr17	+	3018	2	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992235	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992678_94992718
Isoform_30553_5	chr17	+	2959	2	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992294	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992678_94992718
Isoform_30554_5	chr17	+	2807	2	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992446	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992678_94992718
Isoform_30557_30	chr17	+	2536	1	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992758	94995294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_94992800_94995300
Isoform_30562_6	chr17	+	3651	1	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	2	-3264	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	95057529	95061180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_95057500_95061200
Isoform_30563_3	chr17	-	758	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	95172229	95171471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_95171500_95172200
Isoform_30564_16	chr17	-	1663	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTGTTCTGTTCGTGA	NA	False	NA	NA	False	NA	NA	NA	15213128	15211465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_15211500_15213100
Isoform_30566_4	chr17	-	3243	1	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	15244500	15241257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_15241300_15244500
Isoform_30567_9	chr17	-	1668	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATTCTGTTCTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	15244503	15242835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_15242800_15244500
Isoform_30568_3	chr17	+	976	1	NIC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	-515	-100852	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5046180	5047156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_5046200_5047200
Isoform_30569_3	chr17	+	607	1	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	65911	1126	14113	-1126	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATATGTGGGCTCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	15991139	15991746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_+_15991100_15991700
Isoform_3057_5	chr10	+	3393	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	35	-1081	-21	1080	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTGTTTTATCCACTT	NA	False	NA	NA	False	AGTAAA	-20	NA	76869080	76887346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_30571_3	chr17	+	672	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAACAAAACCATACTAG	NA	False	NA	NA	False	NA	NA	NA	17217568	17218240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_17217600_17218200
Isoform_30573_8	chr17	-	925	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-74	-166	-74	166	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGTTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	17566476	17565551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_17565600_17566500
Isoform_30574_4	chr15	-	175	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80716113	80715938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_80715900_80716100
Isoform_30575_4	chr17	+	931	1	NIC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	23	-10958	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	21869567	21870498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_21869600_21870500
Isoform_30576_4	chr17	+	194	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGGTTTAGATA	NA	False	NA	NA	False	NA	NA	NA	22079105	22079299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_22079100_22079300
Isoform_30579_8	chr17	-	226	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAATAGAAAACATAAA	8887	False	NA	NA	False	NA	NA	NA	23801142	23800916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_23800900_23801100
Isoform_30580_5	chr17	+	200	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAATAAATCTTT	11	False	NA	NA	False	NA	NA	NA	23808077	23808277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_23808100_23808300
Isoform_30581_10	chr17	+	653	1	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	48	-48078	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	5891674	5892327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_5891700_5892300
Isoform_30582_8	chr17	+	2595	1	Genic_Genomic	ENSMUSG00000023902.19	novel	NA	NA	NA	NA	-6	-3726	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	873	False	NA	NA	False	NA	NA	NA	23819823	23822418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_23819800_23822400
Isoform_30586_4	chr17	+	174	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGGTTTG	NA	False	NA	3	True	NA	NA	NA	24001076	24001250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_24001100_24001200
Isoform_30589_3	chr17	-	1336	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCCAAAAAAACAAA	5978	False	NA	NA	False	NA	NA	NA	24245411	24244075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_24244100_24245400
Isoform_3059_5	chr10	+	2188	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-21	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.2178829288705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGGCTTTTCTGTTG	NA	False	NA	8	True	ATTAAA	-10	NA	76869080	76886257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_76869182_76874183_76874414_76877649_76878404_76878731_76878809_76880594_76880737_76885373
Isoform_30590_10	chr17	-	533	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	9	True	NA	NA	False	NA	NA	NA	24251342	24250809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_24250800_24251300
Isoform_30591_3	chr17	-	194	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTTGACCATTCTATC	NA	False	NA	NA	False	NA	NA	NA	24337813	24337619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_24337600_24337800
Isoform_30593_5	chr17	-	1674	1	NIC	ENSMUSG00000036473.17	novel	7683	8	NA	NA	-2	-14182	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	24424495	24422821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_24422800_24424500
Isoform_30595_36	chr17	+	2005	1	FSM	ENSMUSG00000034681.18	ENSMUST00000234342.2	2106	1	104	-3	6	3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	907	False	NA	NA	False	NA	NA	NA	24633642	24635647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24633600_24635600
Isoform_30598_31	chr17	+	2686	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	-18	-240	-18	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTAGGTCTGCCTTCC	NA	False	NA	17	True	ATTAAA	-14	NA	24689390	24692076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24689400_24692100
Isoform_30599_5	chr17	+	488	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	-15	4	4	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGTGGTTTCAGACG	4768	False	NA	9	True	AATAAA	-12	NA	24747225	24747713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_24747200_24747700
Isoform_30600_6	chr17	+	696	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAGAAGAA	8990	False	NA	NA	False	NA	NA	NA	24859737	24860433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_24859700_24860400
Isoform_30604_10	chr17	-	226	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	-96	-2	-96	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGACTCTGCTGCCCCGC	4367	False	NA	NA	False	NA	NA	NA	24938873	24938647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_24938600_24938900
Isoform_30607_15	chr17	-	1209	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	261	3	261	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCACTTTCTTTTCCC	NA	False	NA	0	True	AATAAA	-21	NA	25069077	25067868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25067900_25069100
Isoform_30608_4	chr17	-	1412	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	55	6	55	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGAGCACTTTCTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	25069283	25067871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_25067900_25069300
Isoform_3061_7	chr10	+	2516	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-18	-5	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869083	76886260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
Isoform_30610_4	chr17	+	3779	1	Genic_Genomic	ENSMUSG00000046070.10	novel	NA	NA	NA	NA	16	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	7748	False	NA	8	True	ATTAAA	-15	NA	25097204	25100983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_25097200_25101000
Isoform_30611_6	chr17	+	3399	1	NIC	ENSMUSG00000046070.10	novel	2625	2	NA	NA	-146	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTGACCTAGAGTGT	8128	False	NA	8	True	ATTAAA	-15	NA	25097584	25100983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_25097600_25101000
Isoform_30615_19	chr17	-	2223	1	NIC	ENSMUSG00000024165.10	novel	1430	6	NA	NA	3	-9805	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGGAAAGAAAGAAAGAAAG	4796	False	NA	NA	False	NA	NA	NA	25179640	25177417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25177400_25179600
Isoform_30616_4	chr17	-	513	1	Genic_Genomic	ENSMUSG00000024170.16	novel	NA	NA	NA	NA	236	88	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	25320164	25319651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_-_25319700_25320200
Isoform_30617_21	chr17	-	1780	1	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	11	-33	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	25334917	25333137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25333100_25334900
Isoform_3062_15	chr10	+	2405	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-21	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.9535941116332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869080	76886260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_76869280_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_30620_43	chr17	+	932	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	47	2130	47	-2130	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAATTTTCTCACCT	NA	False	NA	11	True	AATACA	-16	NA	25403574	25404506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403600_25404500
Isoform_30621_9	chr17	+	2027	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	34	1048	34	-1048	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTGACGCTTACAAAAT	NA	False	NA	18	True	AATAAA	-31	NA	25403561	25405588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_25403600_25405600
Isoform_30623_4	chr17	+	2611	1	Genic_Genomic	ENSMUSG00000015126.10	novel	NA	NA	NA	NA	19	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4622	False	NA	29	True	AATAAA	-19	NA	25459162	25461773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_25459200_25461800
Isoform_30625_17	chr17	-	2427	1	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-8	-1563	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGGAAAGAAAGAA	4739	False	NA	NA	False	NA	NA	NA	25492365	25489938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25489900_25492400
Isoform_30628_12	chr17	-	2611	1	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	4	-24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5678	False	NA	NA	False	NA	NA	NA	25946389	25943778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_25943800_25946400
Isoform_30629_3	chr17	-	178	1	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTGTTGTGCACT	NA	False	NA	NA	False	NA	NA	NA	26024847	26024669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_26024700_26024800
Isoform_3063_23	chr10	+	2417	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-28	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.1832547465666	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869073	76886260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_76869285_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
Isoform_30630_14	chr17	+	900	1	Genic_Genomic	ENSMUSG00000038141.12	novel	NA	NA	NA	NA	-5	-34400	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6320739	6321639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_+_6320700_6321600
Isoform_30632_3	chr17	+	1153	1	Antisense	novelGene_ENSMUSG00000039615.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAAGTCCACAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	26052086	26053239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_+_26052100_26053200
Isoform_30634_7	chr17	-	3013	1	Genic_Genomic	ENSMUSG00000116995.2	novel	NA	NA	NA	NA	-10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	3165080	3162067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_-_3162100_3165100
Isoform_30635_3	chr17	-	3075	1	Genic_Genomic	ENSMUSG00000116995.2	novel	NA	NA	NA	NA	-80	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165150	3162075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr17_-_3162100_3165200
Isoform_30637_7	chr17	-	2296	1	NIC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	2	-30977	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAATCAGTTGAAAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	26288517	26286221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26286200_26288500
Isoform_30638_12	chr17	-	2059	1	NIC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	0	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	26314447	26312388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_26312400_26314400
Isoform_30642_8	chr17	+	1701	1	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	-5	-5850	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	GGGGCT	-18	NA	26780486	26782187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26780500_26782200
Isoform_30644_8	chr5	+	175	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118581116	118581291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_118581100_118581300
Isoform_30645_4	chr17	+	1300	1	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-22	-25972	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCAAAAAAAACAAAAAC	1318	False	NA	NA	False	NA	NA	NA	26934661	26935961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_26934700_26936000
Isoform_30646_3	chr17	-	305	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAGAATGTGGATT	179	False	NA	NA	False	NA	NA	NA	27133736	27133431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_27133400_27133700
Isoform_30647_8	chr17	+	1362	1	NIC	ENSMUSG00000024301.11	novel	819	3	NA	NA	10	-3046	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27136074	27137436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_27136100_27137400
Isoform_30648_3	chr17	-	600	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAAAAGAACAATCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	27192012	27191412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_27191400_27192000
Isoform_30649_4	chr17	+	207	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTCTCTCTCTCTCT	6961	False	NA	NA	False	AAAAAG	-10	NA	27210304	27210511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_27210300_27210500
Isoform_30650_4	chr17	+	885	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	27217018	27217903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_27217000_27217900
Isoform_30658_17	chr11	+	265	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	AATAAA	-24	NA	46356664	46356929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_46356700_46356900
Isoform_30659_8	chr17	+	172	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAATTTGGGGGTCT	NA	False	NA	NA	False	NA	NA	NA	27893587	27893759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_27893600_27893800
Isoform_3066_336	chr10	+	2203	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	85	2	-15	-2	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCAGTCCTAGAAATG	NA	False	NA	14	True	AATAAA	-15	NA	77095136	77105407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
Isoform_30661_3	chr17	-	3020	1	FSM	ENSMUSG00000117171.2	ENSMUST00000233181.2	3026	1	7	-1	7	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCTGCGTTAAAAAGA	NA	False	NA	NA	False	TATAAA	-17	NA	28396649	28393629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_28393600_28396600
Isoform_30662_6	chr17	+	215	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6462836	6463051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_6462800_6463100
Isoform_30663_6	chr17	-	180	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	9483	False	NA	NA	False	NA	NA	NA	35254603	35254423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35254400_35254600
Isoform_30664_13	chr4	-	178	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8758	False	NA	NA	False	NA	NA	NA	122918702	122918524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_122918500_122918700
Isoform_30665_6	chr17	+	1510	1	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	6602	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	NA	False	NA	11	True	AATAAA	-13	NA	28544030	28545540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_28544000_28545500
Isoform_3067_5	chr10	+	2268	9	NIC	ENSMUSG00000020260.10	novel	2290	9	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	45.99184710359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCAGTCCTAGAAAT	NA	False	NA	13	True	AATAAA	-14	NA	77095141	77105406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101867_77102746_77102928_77103017_77103142_77104360
Isoform_30672_6	chr17	+	2063	1	FSM	ENSMUSG00000066170.8	ENSMUST00000095448.5	2055	1	-5	-3	-5	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28742261	28744324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28742300_28744300
Isoform_30673_4	chr17	+	1835	1	FSM	ENSMUSG00000066170.8	ENSMUST00000095448.5	2055	1	-34	254	-34	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTAGTCATGATGTTT	NA	False	NA	NA	False	NA	NA	NA	28742232	28744067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_28742200_28744100
Isoform_30674_5	chr17	-	1601	1	ISM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	33238	1	3314	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTCCACAAGTTTGG	NA	False	NA	-12	True	AATAAA	-19	NA	28808223	28806622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_28806600_28808200
Isoform_30676_6	chr17	-	316	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAACGAAAAAA	1517	False	NA	NA	False	NA	NA	NA	29006596	29006280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29006300_29006600
Isoform_30677_7	chr18	+	180	1	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3833	False	NA	NA	False	NA	NA	NA	35777636	35777816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_35777600_35777800
Isoform_30678_7	chr17	-	443	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACTAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	29114256	29113813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29113800_29114300
Isoform_3068_53	chr10	+	2261	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	33	0	-3	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1324	False	NA	32	True	AATAAA	-15	NA	77417586	77434566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
Isoform_30681_10	chr17	-	907	1	FSM	ENSMUSG00000024006.18	ENSMUST00000233723.2	820	1	-104	17	-6	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	29226945	29226038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29226000_29226900
Isoform_30682_9	chr17	-	415	1	FSM	ENSMUSG00000086154.3	ENSMUST00000233751.2	1708	1	65	1228	65	-1228	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29251477	29251062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29251100_29251500
Isoform_30686_4	chr17	-	199	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29265859	29265660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29265700_29265900
Isoform_30693_100	chr17	-	421	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-53	-35	-53	35	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAATAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	29356331	29355910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29355900_29356300
Isoform_30694_7	chr17	-	333	1	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAAGTAATTTAATAG	6115	False	NA	NA	False	NA	NA	NA	29392015	29391682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29391700_29392000
Isoform_30697_3	chr15	+	200	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGAAGGTTGACTAACAT	NA	False	NA	NA	False	NA	NA	NA	8036215	8036415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_8036200_8036400
Isoform_30698_13	chr17	+	182	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	29572941	29573123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_29572900_29573100
Isoform_30699_8	chr17	+	203	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTAGGTATGTGT	NA	False	NA	36	True	NA	NA	NA	29577206	29577409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_29577200_29577400
Isoform_3070_4	chr10	+	840	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	-8	1462	-8	1	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCGTTGATGTCCTTTTT	1283	False	NA	9	True	NA	NA	NA	77417545	77433104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
Isoform_30700_6	chr17	-	180	1	ISM	ENSMUSG00000097125.3	ENSMUST00000234190.2	417	2	17641	11	17046	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACACAGAGAC	NA	False	NA	NA	False	NA	NA	NA	29666083	29665903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_29665900_29666100
Isoform_30706_15	chr17	-	1247	1	FSM	ENSMUSG00000091614.3	ENSMUST00000168877.2	510	1	-87	-650	-87	11	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	29738851	29737604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_29737600_29738900
Isoform_30709_3	chr17	-	214	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCATGTATGTCTCTG	9569	False	NA	NA	False	NA	NA	NA	29832779	29832565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29832600_29832800
Isoform_3071_12	chr10	+	1704	5	FSM	ENSMUSG00000020265.17	ENSMUST00000137841.9	1005	5	16	-715	0	3	multi-exon	FALSE	canonical	3	61	junction_3	668.550858200033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCTATGTTAAACACT	NA	False	NA	28	True	AGTAAA	-21	NA	77442058	77453259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451760_77451869_77451981
Isoform_30710_8	chr17	+	1353	1	FSM	ENSMUSG00000090083.12	ENSMUST00000234498.2	686	1	21	-688	-5	688	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	29833858	29835211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_+_29833900_29835200
Isoform_30714_7	chr17	+	176	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTATTTTCAA	1849	False	NA	NA	False	NA	NA	NA	30847558	30847734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_30847600_30847700
Isoform_30715_7	chr17	-	1222	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGATGTCTAAAAAAAT	2348	False	NA	NA	False	NA	NA	NA	6744541	6743319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_6743300_6744500
Isoform_30719_6	chr17	+	164	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAAAAGTGCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	31339768	31339932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_31339800_31339900
Isoform_3072_315	chr10	+	1595	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	907	0	2	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77442058	77453258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
Isoform_30720_9	chr17	-	3483	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	6757830	6754347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_6754300_6757800
Isoform_30724_8	chr17	-	1060	1	Antisense	novelGene_ENSMUSG00000024036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	5914	False	NA	NA	False	NA	NA	NA	31506374	31505314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_31505300_31506400
Isoform_30725_6	chr17	-	176	1	Antisense	novelGene_ENSMUSG00000024036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31526642	31526466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_31526500_31526600
Isoform_30726_3	chr17	-	164	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATAAATAAAAAAAA	9145	False	NA	NA	False	NA	NA	NA	31861887	31861723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_31861700_31861900
Isoform_30731_24	chr17	-	178	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGAACACAC	NA	False	NA	NA	False	NA	NA	NA	31914465	31914287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_31914300_31914500
Isoform_30733_3	chr17	+	562	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32002797	32003359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_32002800_32003400
Isoform_30734_8	chr17	-	3547	2	NNC	ENSMUSG00000024042.8	novel	301	3	NA	NA	-19	-711	intron_retention	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32074797	32071219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr17_-_32073558_32073588
Isoform_30737_26	chr17	+	184	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAGAAATGTTTA	NA	False	NA	NA	False	AATAAA	-6	NA	32331641	32331825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_32331600_32331800
Isoform_30738_6	chr17	-	4705	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6848643	6843938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_6843900_6848600
Isoform_30739_3	chr17	-	1109	1	ISM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	78088	3	-5013	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCCATGGAACCCTTT	292	False	NA	-14	True	AATAAA	-20	NA	32424995	32423886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr17_-_32423900_32425000
Isoform_30743_20	chr17	-	1415	1	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	4	-2584	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32540155	32538740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_-_32538700_32540200
Isoform_30747_9	chr1	-	494	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAAAGGGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	11694926	11694432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_11694400_11694900
Isoform_30753_3	chr17	+	956	1	Antisense	novelGene_ENSMUSG00000059208.16_AS_novelGene_ENSMUSG00000079557.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGCCTTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	33903805	33904761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_+_33903800_33904800
Isoform_30755_13	chr17	-	176	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAAGT	8769	False	NA	NA	False	NA	NA	NA	34019291	34019115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_34019100_34019300
Isoform_30759_3	chr17	-	1100	1	Antisense	novelGene_ENSMUSG00000024308.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAGATTGAAACA	NA	False	NA	NA	False	NA	NA	NA	34148383	34147283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_34147300_34148400
Isoform_3076_5	chr10	+	1771	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	-43	902	-43	7	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATGTTAAACACTGTAT	NA	False	NA	32	True	AGTAAA	-25	NA	77441887	77453263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
Isoform_30763_15	chr17	-	1573	1	FSM	ENSMUSG00000067370.5	ENSMUST00000087543.5	1580	1	8	-1	8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCGTCTTCACCAGG	NA	False	NA	-1	True	AATAAA	-18	NA	34170454	34168881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_34168900_34170500
Isoform_30769_3	chr17	-	875	1	Antisense	novelGene_ENSMUSG00000073421.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	34484168	34483293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_34483300_34484200
Isoform_3077_21	chr10	+	2208	8	NIC	ENSMUSG00000112241.2	novel	512	6	NA	NA	28	4451	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	535.279480691143	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTGTGGTGCTCAC	NA	False	NA	6	True	AATAAA	-19	NA	77442058	77481828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
Isoform_30771_3	chr17	-	303	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	8312	False	NA	NA	False	NA	NA	NA	35123486	35123183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35123200_35123500
Isoform_30772_3	chr17	+	4584	1	NIC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	23	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	8007	False	NA	NA	False	NA	NA	NA	35150312	35154896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr17_+_35150300_35154900
Isoform_30773_3	chr17	+	218	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	9062	False	NA	NA	False	AAGAAA	-22	NA	35168133	35168351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_35168100_35168400
Isoform_30774_7	chr17	-	2222	1	FSM	ENSMUSG00000093009.3	ENSMUST00000175268.3	66	1	-1451	-705	-1451	705	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTTAAATAGACTTT	6010	False	NA	NA	False	AATAAA	-10	NA	35171444	35169222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35169200_35171400
Isoform_30775_12	chr17	-	2395	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	3	569	3	-569	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCACTGCCCCGCTGATG	9800	False	NA	NA	False	AATAAA	-22	NA	35191129	35188734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_35188700_35191100
Isoform_30777_3	chr17	-	646	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAGAA	273	False	NA	NA	False	NA	NA	NA	35219330	35218684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_35218700_35219300
Isoform_30779_7	chr17	+	173	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35335791	35335964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_35335800_35336000
Isoform_30780_6	chr17	-	1036	1	Antisense	novelGene_ENSMUSG00000024392.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAAGAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	35354449	35353413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr17_-_35353400_35354400
Isoform_30781_4	chr18	-	1217	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	44	-5	3	5	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGCATTTTAATG	-9	True	NA	-1	True	AATAAA	-17	NA	3337530	3294476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
Isoform_30782_5	chr18	-	2495	8	FSM	ENSMUSG00000024235.12	ENSMUST00000025078.10	2569	8	62	12	4	1	multi-exon	FALSE	canonical	2	4	junction_5	7.63450812336422	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTCTTAATTTTTG	0	True	NA	NA	False	AATAAA	-14	NA	4352953	4331338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348980_4349339_4352851
Isoform_30784_5	chr18	-	2857	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	-5	359	-5	-264	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAGGAAACTGAAATG	357	False	NA	NA	False	AATAAA	-11	NA	5334444	5210387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
Isoform_30785_5	chr18	-	2801	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	61	349	35	-254	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGAAATGTAGAGAAAAT	9	True	NA	NA	False	AATAAA	-21	NA	5334378	5210377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
Isoform_30786_3	chr18	-	4133	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	132	0	4	0	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-19	True	NA	-23	True	AATAAA	-14	NA	6135966	6025216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_30787_4	chr18	-	4721	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	3	-27	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCAGTAATATTTTC	15	True	NA	-20	True	ATTAAA	-24	NA	6135932	6024453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_30788_3	chr18	-	4789	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-25	-333	3	-25	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTAATATTTTCCT	15	True	NA	-18	True	ATTAAA	-26	NA	6135932	6024451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_30789_5	chr18	-	3927	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-86	-1341	-4	2	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGTTTTTTTCCATTG	-27	True	NA	-21	True	AATAAA	-16	NA	6135974	6025214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
Isoform_30793_50	chr18	-	3932	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	3	2097	3	-10	multi-exon	TRUE	canonical	0	0	junction_8	215.348105169282	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATCAAAAAATAAA	-2	True	NA	NA	False	NA	NA	NA	6241520	6203098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
Isoform_3080_8	chr10	+	1853	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	23	-2	23	2	multi-exon	FALSE	canonical	3	41	junction_1	598.245397437837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77442427	77453258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
Isoform_30800_20	chr18	-	3962	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-1	4	-1	-4	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACGTGCAGTGGTCTT	-19	True	NA	-5	True	AATAAA	-23	NA	6490857	6435956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
Isoform_30801_13	chr18	-	3994	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-33	4	-33	-4	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACGTGCAGTGGTCTT	-2	True	NA	-5	True	AATAAA	-23	NA	6490889	6435956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
Isoform_30806_52	chr18	-	1218	12	ISM	ENSMUSG00000057440.9	ENSMUST00000235093.2	3786	13	-24	4339	0	-6	5prime_fragment	FALSE	canonical	3	86	junction_11	9.14529188360676	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAATAAGAAAATAAAT	-10	True	NA	NA	False	NA	NA	NA	7626854	7403326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
Isoform_30807_12	chr18	-	1214	12	ISM	ENSMUSG00000057440.9	ENSMUST00000234571.2	1784	13	7	23679	0	-6	5prime_fragment	FALSE	canonical	3	19	junction_11	25.0034708334465	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAATAAGAAAATAAAT	-10	True	NA	NA	False	NA	NA	NA	7626854	7403326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
Isoform_30809_18	chr18	-	2160	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-33	3630	-29	17	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTAGCCTTCTTCTG	NA	False	NA	-2	True	AATAAA	-28	NA	9450183	9315933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
Isoform_3081_469	chr10	+	1992	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	42	-3	4	3	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGGTGCTCACTT	132	False	NA	8	True	AATAAA	-21	NA	77458150	77481830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
Isoform_30812_4	chr18	-	927	3	ISM	ENSMUSG00000024286.9	ENSMUST00000234844.2	1354	8	-477	61517	-9	8778	5prime_fragment	FALSE	canonical	3	51	junction_2	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACAGAGGCTTT	5	True	NA	NA	False	NA	NA	NA	9450163	9377622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_9377829_9386734_9386810_9449517
Isoform_30814_282	chr18	-	2181	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	23	2522	23	6	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATACACTTATTAT	-37	True	NA	-59	True	AATAAA	-21	NA	10030118	9995587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_30815_222	chr18	-	2295	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	60	2371	0	157	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAACTTTTGACATTTC	0	True	NA	-5	True	AATAAA	-19	NA	10030081	9995436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_30816_55	chr18	-	4116	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	36	574	-24	-574	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAAGGAAGA	-24	True	NA	NA	False	NA	NA	NA	10030105	9993639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_30817_17	chr18	-	2204	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	0	2522	0	6	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATACACTTATTAT	-60	True	NA	-59	True	AATAAA	-21	NA	10030141	9995587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_30818_15	chr18	-	2362	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	-7	2371	-7	157	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAACTTTTGACATTTC	NA	False	NA	-5	True	AATAAA	-19	NA	10030148	9995436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
Isoform_30824_4	chr18	-	2881	18	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-10	34856	-10	-2320	5prime_fragment	TRUE	canonical	3	139	junction_7	21.5075427342053	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCACTTAATGTGC	148	False	NA	NA	False	NA	NA	NA	10182055	10099256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_30825_15	chr18	-	2726	17	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-10	36525	-10	-3989	5prime_fragment	FALSE	canonical	3	139	junction_6	21.8352317081821	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAATGATTTACTGT	148	False	NA	3	True	AAGAAA	-31	NA	10182055	10100925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
Isoform_30836_5	chr18	-	4192	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	245	108	2	-4	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATAAATGTACTTGATA	-25	True	NA	-33	True	AATAAA	-29	NA	10610107	10566614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
Isoform_30841_6	chr18	-	2552	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	8	-1134	-8	-1	multi-exon	TRUE	canonical	3	13	junction_4	4.03871569806491	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTCTGTATGTTTAT	NA	False	NA	NA	False	TTTAAA	-13	NA	12254579	12114998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
Isoform_30842_5	chr18	-	5193	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	28	3	-14	-3	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGAGGTCTTTTATT	NA	False	NA	-29	True	AATAAA	-13	NA	12369429	12322752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
Isoform_30844_5	chr18	-	2599	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	407	24	-26	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12995323	12888394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_30845_3	chr18	-	2827	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	180	23	-70	1	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12995550	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_30846_5	chr18	-	2695	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	312	23	62	1	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12995418	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
Isoform_30847_6	chr18	-	2770	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	60	-12	0	-2	multi-exon	TRUE	canonical	3	45	junction_13	91.3749671156418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATTTCAGTTGATATT	NA	False	NA	-10	True	AATAAA	-37	NA	12996437	12888372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
Isoform_30848_12	chr18	-	2703	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	106	9	-43	1	multi-exon	FALSE	canonical	3	45	junction_13	91.3749671156418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996391	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
Isoform_30849_26	chr18	-	3912	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	21	23	-14	1	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	13074877	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
Isoform_30851_8	chr18	-	2475	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12996440	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
Isoform_30852_4	chr18	-	2487	14	NNC	ENSMUSG00000044252.19	novel	3030	14	NA	NA	2595	1	intron_retention	FALSE	canonical	2	6	junction_13	100.952387863708	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAGTGTGAATGCT	NA	False	NA	-31	True	AATAAA	-16	NA	12999569	12888393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12999522
Isoform_30853_6	chr18	-	2409	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	496	-12	23	-2	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATTTCAGTTGATATT	NA	False	NA	-10	True	AATAAA	-37	NA	12995274	12888372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
Isoform_30867_48	chr18	-	2940	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	151	7	1	-1	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCATTTGTTTCTTT	NA	False	NA	-20	True	AATAAA	-16	NA	14815820	14758686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_3087_20	chr10	+	1078	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	108	632	-22	323	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGGTCTGGGACAGGA	NA	False	NA	4	True	AATAAA	-17	NA	77814465	77820636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
Isoform_30871_206	chr18	-	2849	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	63	-1	0	-1	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCATTTGTTTCTTT	NA	False	NA	-20	True	AATAAA	-16	NA	14815822	14758686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_30876_14	chr18	-	2625	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	3	-25	1	-1	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCATTTGTTTCTTT	NA	False	NA	-20	True	AATAAA	-16	NA	14815820	14758686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_30877_11	chr18	-	2741	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815821	14758688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
Isoform_3088_13	chr10	+	1693	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	129	-4	-1	2	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCCAGGCCCACTT	NA	False	NA	16	True	AATAAA	-16	NA	77814486	77821272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
Isoform_30885_21	chr18	-	5751	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	50	7	50	-7	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGTGTGGTGATGT	NA	False	NA	-10	True	AATATA	-9	NA	20879411	20817662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
Isoform_3089_4	chr10	+	1057	6	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-22	321	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	21.8595516879921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAAGGTCTGGGACAG	NA	False	NA	2	True	AATAAA	-15	NA	77814465	77820634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_77814616_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
Isoform_30897_11	chr18	-	5405	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-302	-88	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTAGATGCCTTT	NA	False	NA	-110	True	AATAAA	-19	NA	21029452	20950367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_30898_3	chr18	-	5475	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	5	at_least_one_novel_splicesite	TRUE	canonical	3	164	junction_9	17.2092464467595	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTAGTTTCCTGTGAAA	NA	False	NA	-17	True	AATAAA	-24	NA	21029429	20950274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_30899_11	chr18	-	2996	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-280	1	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_10	12.8571640211466	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTTCTATGGTCATT	NA	False	NA	-1	True	AATAAA	-29	NA	21029430	20979200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
Isoform_3090_3	chr10	+	1672	12	FSM	ENSMUSG00000000730.14	ENSMUST00000151242.8	1657	12	-9	-6	-9	0	multi-exon	FALSE	canonical	2	8	junction_7	3.67029622512479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTGGTGTGGTGTGTG	5699	False	NA	29	True	AATATA	-21	NA	77885783	77899456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
Isoform_30900_35	chr18	-	3639	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	-1	1285	-1	1	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	21433196	21261542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
Isoform_30904_11	chr18	-	3568	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	-18	1651	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGTAGCTTGGAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	24153395	24145330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
Isoform_30906_23	chr18	-	3195	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-27	-1655	23	1655	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTTGGAATTGCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	24153404	24145326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
Isoform_3091_7	chr10	+	2817	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905132	77915359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
Isoform_30910_71	chr18	-	3138	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	26	2568	26	1655	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTTGGAATTGCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	24153841	24145326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
Isoform_30913_250	chr18	-	2395	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	100	3	-18	-3	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGGGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	24254910	24237816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
Isoform_30914_28	chr18	-	2453	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	42	3	42	-3	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGGGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	24254968	24237816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
Isoform_30917_7	chr18	-	968	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	4	1526	4	91	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAGTAAGATTATGCA	NA	False	NA	-33	True	ATTAAA	-44	NA	24255006	24239339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
Isoform_30918_9	chr18	-	4302	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-4	1	-4	-1	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	24663265	24618017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
Isoform_3092_8	chr10	+	2760	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	54	0	-4	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905189	77915359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
Isoform_30922_6	chr18	-	2344	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	20466	-9	1	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTCATGTTTTTGAA	NA	False	NA	0	True	AATAAA	-19	NA	24663270	24638482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
Isoform_30923_44	chr18	-	3889	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-10	3	-10	-3	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTTGTTCTCTTTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	24736884	24712940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
Isoform_30926_22	chr18	-	2381	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	293	1485	-20	-1485	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTGTGAAAATGTTTA	NA	False	NA	NA	False	AATAAA	-39	NA	25301771	25270578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_30927_4	chr18	-	2576	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	100	1483	100	-1483	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGTGAAAATGTTTAAC	NA	False	NA	NA	False	AATAAA	-41	NA	25301964	25270576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_30928_63	chr18	-	1291	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	293	2575	-20	-2575	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTATCGACTAGTT	NA	False	NA	-6	True	AATAAA	-20	NA	25301771	25271668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_30929_7	chr18	-	1484	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	97	2578	97	-2578	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCATCAGTATCGACTA	NA	False	NA	-9	True	AATAAA	-17	NA	25301967	25271671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
Isoform_3093_667	chr10	+	568	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	33	2	33	-2	multi-exon	FALSE	canonical	3	3631	junction_2	117.5	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATTGTGTCCTTAGTT	NA	False	NA	21	True	AATATA	-16	NA	78261535	78263454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78261692_78262760_78262863_78263144
Isoform_30930_4	chr18	-	459	2	ISM	ENSMUSG00000024268.17	ENSMUST00000224553.2	1729	12	266675	14	-130	1	3prime_fragment	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAATGATATAAAA	NA	False	NA	NA	False	CATAAA	-12	NA	25620084	25612543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_25612769_25619850
Isoform_30931_3	chr18	-	1014	6	ISM	ENSMUSG00000024268.17	ENSMUST00000224553.2	1729	12	248647	17729	-3816	7018	internal_fragment	FALSE	non_canonical	0	0	junction_3	11.7813411800185	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTCTGTCTGCATCC	NA	False	NA	NA	False	AGTAAA	-11	NA	25638112	25630258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_25630588_25634257_25634408_25635989_25636135_25637195_25637340_25637545_25637626_25637946
Isoform_30932_4	chr18	-	1037	6	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248912	18120	-3832	7022	internal_fragment	FALSE	canonical	3	20	junction_1	5.17687164221791	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTCTGCATCCCACT	NA	False	NA	NA	False	AGTAAA	-15	NA	25638128	25630254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
Isoform_30933_59	chr18	-	2950	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	0	1421	0	-1421	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742955	31714641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_30934_14	chr18	-	3374	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	0	997	0	-997	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAACTGCTTTTTTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	31742955	31714217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_30939_4	chr18	-	2870	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	-13	-1422	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742977	31714642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
Isoform_30941_3	chr18	-	3569	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	23	1505	-18	-1505	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAATACACAGCTGA	NA	False	NA	NA	False	NA	NA	NA	33346892	33333912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
Isoform_30944_5	chr18	-	2065	4	FSM	ENSMUSG00000042834.16	ENSMUST00000051087.16	659	4	260	-1666	-44	0	multi-exon	FALSE	canonical	3	37	junction_1	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGCTTTGGCTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	33596532	33570074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430
Isoform_30945_6	chr18	-	2184	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	0	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTTTGGCTCATTAT	NA	False	NA	-5	True	AATAAA	-19	NA	33597082	33570072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
Isoform_30946_7	chr18	-	2041	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	143	1	-32	-1	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTTTGGCTCATTAT	NA	False	NA	-5	True	AATAAA	-19	NA	33596939	33570072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
Isoform_30949_6	chr18	-	2959	23	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	319	634	319	-44	3prime_fragment	FALSE	canonical	3	125	junction_9	28.0317116763164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34139653	33930013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
Isoform_3095_61	chr10	+	607	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	-4	0	-4	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	23	True	AATATA	-18	NA	78261498	78263456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78261692_78262760_78262863_78263144
Isoform_30950_6	chr18	-	3052	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-122	636	-75	-46	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	34140094	33930015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_30951_6	chr18	-	2947	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-14	633	-14	-43	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGTCCTTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	34139986	33930012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
Isoform_30952_6	chr18	-	2351	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28996	-44	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054023	33930013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
Isoform_30953_149	chr18	-	766	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-20	2106	-20	1	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGCCTTTGTTGTCG	5541	False	NA	-4	True	ATTAAA	-19	NA	34506442	34480043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_30954_11	chr18	-	2869	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-20	3	-20	-3	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCTTTAAAATGTTGT	5541	False	NA	-10	True	AATAAA	-24	NA	34506442	34477940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_30956_8	chr18	-	892	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-148	2108	-148	-1	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTTGCCTTTGTTGT	5413	False	NA	-6	True	ATTAAA	-17	NA	34506570	34480045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
Isoform_30958_5	chr18	-	637	4	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	-35	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	233.445687235573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGCTTTGCCTTTGT	5526	False	NA	-9	True	ATTAAA	-14	NA	34506457	34480048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34480222_34482687_34482857_34505457_34505552_34506256
Isoform_30961_239	chr18	-	3226	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	28	1214	-19	1	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCCTTTGGTGTG	NA	False	NA	-4	True	NA	NA	NA	34757626	34732881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_30962_71	chr18	-	3008	21	FSM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	27	-30	-20	1	multi-exon	FALSE	canonical	3	148	junction_13	121.034540524596	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCCTTTGGTGTG	NA	False	NA	-4	True	NA	NA	NA	34757627	34732881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_30963_8	chr18	-	3024	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	18	1216	18	-1	multi-exon	FALSE	canonical	3	33	junction_11	140.007142674936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757636	34732883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_30966_19	chr18	-	2968	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	27	874	-20	-874	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTCTTTGCTTGTG	NA	False	NA	1	True	NA	NA	NA	34757627	34735101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
Isoform_3097_36	chr10	+	2280	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	-29	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGTGTATACTGGT	5346	False	NA	25	True	AATAAA	-34	NA	78410280	78420331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_30976_49	chr18	-	2067	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	20	-3	3	3	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	34784768	34764000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
Isoform_3098_6	chr10	+	2350	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	31	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGTGTATACTGGT	5276	False	NA	25	True	AATAAA	-34	NA	78410210	78420331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_30980_1086	chr18	-	3026	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	11	1096	-2	899	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATTTGTGCATGAA	NA	False	NA	-4	True	AATAAA	-24	NA	34784777	34765831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
Isoform_30988_5	chr18	-	2183	13	ISM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	6	8	-3	-4	intron_retention	FALSE	canonical	3	161	junction_8	19.6728450747047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790
Isoform_30989_4	chr18	-	2054	14	ISM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-15	8	-15	-4	intron_retention	FALSE	canonical	3	161	junction_8	19.4209062001014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2777	False	NA	-23	True	AATAAA	-14	NA	34884601	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166
Isoform_3099_32	chr10	+	2306	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	20	3	20	-1	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5419	False	NA	27	True	AATAAA	-36	NA	78410353	78420333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_30990_145	chr18	-	1931	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	6	8	-3	-4	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_30992_11	chr18	-	2081	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	155	junction_13	20.7081723569914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2798	False	NA	-23	True	AATAAA	-14	NA	34884580	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
Isoform_30993_7	chr18	-	1971	15	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	48.8411105691983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2770	False	NA	-23	True	AATAAA	-14	NA	34884608	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_30994_5	chr18	-	1850	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	51.279025551764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2777	False	NA	-23	True	AATAAA	-14	NA	34884601	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_30995_5	chr18	-	2458	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	155	junction_13	21.055013879536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACCTCTAGATGTC	2789	False	NA	-23	True	AATAAA	-14	NA	34884589	34866053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34866447_34866629_34866742_34867771_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_30996_3	chr18	-	2335	12	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-11	3	intron_retention	FALSE	canonical	3	155	junction_11	19.0015223400566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	2781	False	NA	NA	False	NA	NA	NA	34884597	34867397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_30997_5	chr18	-	2347	12	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-14	0	intron_retention	FALSE	canonical	3	11	junction_4	52.1141468079509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAGATC	2778	False	NA	NA	False	NA	NA	NA	34884600	34867400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
Isoform_31_14	ERCC-00019	+	624	1	FSM	ERCC-00019A	DQ883651	627	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	2	626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00019_+_0_600
Isoform_3100_5	chr10	+	2390	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	-66	5	-42	-3	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGTGTATACTGGT	5333	False	NA	25	True	AATAAA	-34	NA	78410267	78420331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_31005_57	chr18	-	3675	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	32	2	32	-2	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTGTGCTTGAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	35065028	35035839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
Isoform_31007_20	chr18	-	3708	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	1	0	1	0	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTGCTTGAGATT	NA	False	NA	NA	False	ATTAAA	-16	NA	35065059	35035837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
Isoform_3103_10	chr10	+	2517	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5376	False	NA	26	True	AATAAA	-35	NA	78410310	78420332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_31034_2734	chr18	-	2823	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	7	219	7	-219	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	2734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	206	False	NA	-11	True	AATAAA	-19	NA	35087403	35070685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
Isoform_31036_51	chr18	-	2855	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	-25	219	-25	-219	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	174	False	NA	-11	True	AATAAA	-19	NA	35087435	35070685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
Isoform_31038_112	chr18	-	3029	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	14	6	14	-6	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCCAGTCGTTGTAA	213	False	NA	-25	True	NA	NA	NA	35087396	35070472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
Isoform_3104_17	chr10	+	2478	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5415	False	NA	26	True	AATAAA	-35	NA	78410349	78420332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_3105_9	chr10	+	2178	16	NIC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	44.6186806916864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5877	False	NA	27	True	AATAAA	-36	NA	78410811	78420333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_78410830_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_31052_3	chr18	-	1863	12	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	63.1377871427979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCTGTCTCTTGTGTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	35631946	35399449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35625911_35626020_35626197_35626287_35631843
Isoform_31053_31	chr18	-	1684	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	18	1	-17	-1	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCTGTCTCTTGTGTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	35631964	35399449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
Isoform_31054_50	chr18	-	1649	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	53	1	0	-1	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCTGTCTCTTGTGTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	35631929	35399449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
Isoform_31055_3	chr18	-	1214	7	NNC	ENSMUSG00000024357.11	novel	1532	8	NA	NA	1320	1	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_6	51.8215420671966	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTCTTGTGTCTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	35474800	35399447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35474777
Isoform_31057_15	chr18	-	905	4	FSM	ENSMUSG00000024353.6	ENSMUST00000025211.6	904	4	0	-1	0	1	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTGTTGGCTGTTGAAG	NA	False	NA	0	True	AATAAA	-17	NA	35782420	35780318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35782212
Isoform_31058_36	chr18	-	659	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	39	4	9	0	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTAATGCCCAACC	NA	False	NA	-11	True	AATAAA	-22	NA	35795200	35789745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
Isoform_3106_16	chr10	+	2589	12	FSM	ENSMUSG00000032763.12	ENSMUST00000218875.2	3020	12	428	3	-8	-1	multi-exon	FALSE	canonical	3	132	junction_8	17.4725286148956	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5914	False	NA	27	True	AATAAA	-36	NA	78410848	78420333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297
Isoform_31060_12	chr18	-	671	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	39	0	9	0	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTATCCCATTT	NA	False	NA	-1	True	NA	NA	NA	35795200	35793068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
Isoform_31062_4	chr18	-	5251	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCGACTTTATGACTCC	NA	False	NA	-7	True	ATTAAA	-15	NA	35836188	35804158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
Isoform_31063_15	chr18	-	1241	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-16	3921	-16	7	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTCTGCTGACTTTGT	NA	False	NA	-3	True	AATACA	-21	NA	35836190	35808076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
Isoform_31064_3	chr18	-	818	3	ISM	ENSMUSG00000024350.7	ENSMUST00000237995.2	909	7	7463	3058	2170	-3058	internal_fragment	FALSE	canonical	3	58	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	35834004	35819382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_35819907_35830030_35830177_35833856
Isoform_31065_4	chr18	-	1862	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	85	352	-7	0	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGAATGGCCTCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	35873522	35867085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
Isoform_31067_832	chr18	-	686	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	16	407	16	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587561	36537135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
Isoform_31072_20	chr18	-	597	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	16	411	16	118	multi-exon	FALSE	canonical	3	64	junction_1	1494	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGGCATGTGCTTTTCT	NA	False	NA	-27	True	AATAAA	-16	NA	36587561	36537139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36537514_36584132_36584300_36587505
Isoform_31074_21	chr18	-	2339	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	31	5	1	-5	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTTCTGTTTCATTTT	NA	False	NA	-15	True	AATAAA	-17	NA	36648827	36637984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
Isoform_31078_6	chr18	-	4352	2	FSM	ENSMUSG00000024486.7	ENSMUST00000236520.2	2890	2	-13	-1449	-13	1340	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36648841	36644282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36648314_36648520
Isoform_3108_169	chr10	+	2253	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	0	-20	0	-1	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTATACTGGTTT	5893	False	NA	27	True	AATAAA	-36	NA	78410827	78420333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
Isoform_31081_8	chr18	-	995	4	FSM	ENSMUSG00000006050.13	ENSMUST00000173202.3	1299	4	332	-28	0	2	multi-exon	FALSE	canonical	3	1470	junction_2	40.4227658628155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGATGTCAGACTGGT	NA	False	NA	-7	True	NA	NA	NA	36803329	36800296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056
Isoform_31082_305	chr18	-	889	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	525	565	0	0	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803343	36800298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
Isoform_31083_14	chr18	-	956	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	517	506	-8	59	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGTCTCATTCATCAA	NA	False	NA	50	True	NA	NA	NA	36803351	36800239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
Isoform_31086_6	chr18	-	753	4	FSM	ENSMUSG00000006050.13	ENSMUST00000236330.2	760	4	1	6	1	-6	multi-exon	FALSE	canonical	3	29	junction_3	696.127542592272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGAGCCATTCTGAT	NA	False	NA	-18	True	NA	NA	NA	36803342	36800307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803300
Isoform_31087_3	chr18	-	2368	12	FSM	ENSMUSG00000117679.2	ENSMUST00000236001.2	2258	12	-117	7	-67	-7	multi-exon	FALSE	canonical	3	26	junction_10	13.4925752462923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCACTAGTGATGAGT	NA	False	NA	-10	True	AATAAA	-11	NA	36812486	36804214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
Isoform_31088_3	chr18	-	2021	10	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-10	-6	intron_retention	FALSE	canonical	3	5	junction_9	18.684515276322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCACTAGTGATGAGTA	NA	False	NA	-9	True	AATAAA	-12	NA	36812379	36804213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36812049
Isoform_31091_698	chr18	-	416	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	27	129	27	-129	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877583	36875513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36875712_36877233_36877341_36877472
Isoform_31092_75	chr18	-	513	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	27	32	27	-32	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	76	True	TATAAA	-24	NA	36877583	36875416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36875712_36877233_36877341_36877472
Isoform_31093_43	chr18	-	1485	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	-34	0	-18	0	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTCTGCTTGGTAT	NA	False	NA	-8	True	ATTAAA	-14	NA	36899285	36896725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
Isoform_31096_268	chr18	-	1950	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	38	1	38	-1	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTGTGTCCTTGATG	NA	False	NA	-3	True	AATAAA	-15	NA	36916220	36899581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
Isoform_3110_8	chr10	+	1397	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	38	1	10	-1	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGGCATATTCTTTC	3193	False	NA	NA	False	AATAAA	-13	NA	79500430	79504370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
Isoform_31100_139	chr18	-	1733	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	38	1531	38	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777219	37775074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_37776586_37776997
Isoform_31101_5	chr18	-	2955	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	38	309	38	-309	multi-exon	FALSE	canonical	3	1260	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTAAATCCTACATTCT	NA	False	NA	NA	False	AATAAA	-20	NA	37777219	37773852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_37776586_37776997
Isoform_31103_7	chr18	-	1824	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	-53	1531	-53	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777310	37775074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_37776586_37776997
Isoform_31107_6	chr18	-	2197	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	35	1070	35	-1070	multi-exon	FALSE	canonical	3	1260	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAATTCTGTGTGTTTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	37777222	37774613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_37776586_37776997
Isoform_31109_5	chr18	-	1974	2	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	54783	3	1774	-3	3prime_fragment	FALSE	canonical	3	103	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATCTCCCTCTAGCC	2486	False	NA	-27	True	AATAAA	-8	NA	37984686	37976660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_37978552_37984603
Isoform_3111_302	chr10	+	1073	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	29	-1	29	0	multi-exon	FALSE	canonical	3	316	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8035	False	NA	11	True	AATAAA	-13	NA	79505272	79511961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79505618_79511233
Isoform_31110_4	chr18	-	2083	3	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	53014	-2	5	0	3prime_fragment	FALSE	canonical	3	94	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCCTCTAGCCTCCTT	717	False	NA	-22	True	AATAAA	-13	NA	37986455	37976655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_37978552_37984603_37984691_37986355
Isoform_31111_3	chr18	-	2202	4	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	52790	-2	-219	0	3prime_fragment	FALSE	canonical	3	87	junction_3	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCCTCTAGCCTCCTT	493	False	NA	-22	True	AATAAA	-13	NA	37986679	37976655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596
Isoform_31112_27	chr18	-	1623	15	ISM	ENSMUSG00000024456.17	ENSMUST00000025337.14	5596	28	-58	48329	-16	4225	5prime_fragment	FALSE	canonical	3	41	junction_1	3.7931194421005	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAGATGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	38068492	38024984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
Isoform_31115_259	chr18	-	1990	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	42	0	0	0	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088027	38070024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_31117_12	chr18	-	2032	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	-1	1	-1	-1	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTAGTTAGGCCAT	NA	False	NA	-6	True	AATAAA	-20	NA	38088070	38070025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_31118_14	chr18	-	1931	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	-2	103	-2	-103	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACCTTTCTGGGATTT	NA	False	NA	-3	True	AATAAA	-22	NA	38088071	38070127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_31119_6	chr18	-	2369	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTATTAGTTAG	NA	False	NA	-11	True	AATAAA	-15	NA	38088035	38070030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
Isoform_31121_10	chr18	-	2587	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	-1	1684	-1	-1684	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGGCCTGGGCCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	38102828	38092170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
Isoform_31122_5	chr18	-	4252	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	18	0	1	0	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	-2	True	AATAAA	-16	NA	38102809	38090486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
Isoform_31123_3	chr18	-	2578	20	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-5	-1686	combination_of_known_junctions	FALSE	canonical	2	2	junction_16	3.3601873051605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCAGGGCCTGGGCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	38102815	38092172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100955_38101266_38101335_38101802_38101849_38102407_38102506_38102758
Isoform_31126_1223	chr18	-	2230	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	60	-1	-6	1	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38471996	38460609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_31128_53	chr18	-	2045	6	FSM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	33	7	-6	1	multi-exon	FALSE	canonical	3	67	junction_2	488.205448556241	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38471996	38460609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_3113_6	chr10	+	1586	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	-443	0	-443	0	multi-exon	FALSE	canonical	3	316	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	7522	False	NA	11	True	AATAAA	-13	NA	79504759	79511961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79505618_79511233
Isoform_31130_17	chr18	-	1870	5	FSM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	37	22	-6	1	multi-exon	FALSE	canonical	3	53	junction_1	550.877028019866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTGTCTTTTGTG	NA	False	NA	-29	True	ATTAAA	-14	NA	38471996	38460609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_38462027_38466206_38466390_38468068_38468171_38471143_38471276_38471960
Isoform_31132_6	chr18	-	4985	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	7	1444	7	-2	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	CATAAA	-44	NA	39623720	39545041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
Isoform_31133_17	chr18	-	1979	4	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-38	53	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	21.1712593442672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGAAGCTTAAGGAAC	NA	False	NA	NA	False	AATGAA	-9	NA	39622979	39557435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_39557553_39561669_39561834_39619050_39620299_39622529
Isoform_31136_8	chr18	-	1634	4	ISM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	2	13838	2	53	5prime_fragment	FALSE	canonical	3	29	junction_3	17.4419672692682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGAAGCTTAAGGAAC	NA	False	NA	NA	False	AATGAA	-9	NA	39623725	39557435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_39557553_39561669_39561834_39619050_39620299_39623620
Isoform_31139_43	chr18	-	1720	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	74	1534	-12	-1534	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTGTGAAGTTTACT	NA	False	NA	-7	True	ATTAAA	-14	NA	40352408	40338482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_3114_7	chr10	+	893	2	FSM	ENSMUSG00000020308.8	ENSMUST00000219585.2	368	2	4	-529	4	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8483	False	NA	11	True	AATAAA	-13	NA	79505720	79511961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79505886_79511233
Isoform_31141_5	chr18	-	1807	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	-12	1533	-12	-1533	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	-6	True	ATTAAA	-15	NA	40352494	40338481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_31143_4	chr18	-	2271	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	87	970	1	-970	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCCAGTTTTTGCTAGT	NA	False	NA	-7	True	AATAAA	-15	NA	40352395	40337918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
Isoform_31144_111	chr18	-	843	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	25	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084282	42008664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
Isoform_3115_911	chr10	+	1250	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	15	1	15	-1	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518043	79524231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
Isoform_31165_398	chr18	-	3830	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	99	51	-4	-2	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395160	42335413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
Isoform_31166_362	chr18	-	3859	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	69	52	4	-3	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395190	42335414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
Isoform_31178_4	chr18	-	2078	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	11	17	11	-17	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	43526431	43457369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
Isoform_31180_15	chr18	-	1906	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	183	17	183	-17	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	43526259	43457369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
Isoform_31182_10	chr18	-	2715	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	166	4596	0	658	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTCGTCTTGTTTTAT	NA	False	NA	NA	False	GATAAA	-17	NA	46413894	46373013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
Isoform_31183_11	chr18	-	2617	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	167	4693	1	561	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATACATAGTCATTT	NA	False	NA	NA	False	TATAAA	-10	NA	46413893	46373110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
Isoform_31184_6	chr18	-	5126	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	155	2196	-8	-2196	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46413905	46370613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
Isoform_31187_4	chr18	-	2316	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	21	464	-16	-464	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCTGGCACCATTTTC	2734	False	NA	-2	True	TATAAA	-21	NA	46444974	46415681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
Isoform_31188_5	chr18	-	1021	6	ISM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	12	8604	12	16	5prime_fragment	FALSE	canonical	3	52	junction_2	10.1587400793602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAATGGTAATTACAGC	2725	False	NA	NA	False	AAGAAA	-9	NA	46444983	46423821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
Isoform_3119_20	chr10	+	770	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	21	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGACCCGTGTGGGCCT	NA	False	NA	27	True	AATAAA	-18	NA	79518049	79523929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_79518061_79518232_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
Isoform_31192_21	chr18	-	2549	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	24	3153	24	-3153	multi-exon	FALSE	canonical	3	135	junction_1	21.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGTGAATTATTGAGAA	NA	False	NA	-18	True	TATAAA	-17	NA	46659014	46637965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46639457_46657168_46657897_46658684
Isoform_31193_8	chr18	-	5701	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	24	1	24	-1	multi-exon	FALSE	canonical	3	135	junction_1	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTGTGCTCTCATTA	NA	False	NA	-4	True	AATAAA	-17	NA	46659014	46634813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46639457_46657168_46657897_46658684
Isoform_31200_10	chr18	-	3629	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	22	2075	22	-2075	multi-exon	FALSE	canonical	3	135	junction_1	21.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCCCCTTAATGAAA	NA	False	NA	1	True	ATTAAA	-21	NA	46659016	46636887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46639457_46657168_46657897_46658684
Isoform_31203_4	chr18	-	2296	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	48	1860	48	-1860	multi-exon	FALSE	canonical	3	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTTTTGTCCTCTCTCT	9553	False	NA	NA	False	NA	NA	NA	46707552	46692217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46694140_46705867_46705971_46707281
Isoform_31205_295	chr18	-	3420	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	19	-2091	0	-2	multi-exon	FALSE	canonical	3	571	junction_1	23	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTGCCTTCACTTGTT	NA	False	NA	-14	True	AATAAA	-15	NA	46730583	46719007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46721756_46726315_46726562_46730157
Isoform_31215_6	chr18	-	1738	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	-152	9	-152	2	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGCCTTTTTGATGCA	2425	False	NA	-1	True	AATAAA	-21	NA	46861614	46846268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_31216_85	chr18	-	1548	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	7	0	4	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTTTTTGATGCACA	2617	False	NA	1	True	AATAAA	-23	NA	46861422	46846266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_31217_86	chr18	-	1239	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	316	0	-305	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATCACGTGTCTGTTTT	2617	False	NA	-5	True	AGTAAA	-15	NA	46861422	46846575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
Isoform_31221_157	chr18	-	2474	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	3	2288	3	-2288	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTTTACCAGAATAAC	NA	False	NA	-17	True	AATAAA	-12	NA	46874643	46865498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
Isoform_31222_5	chr18	-	2735	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	-251	2281	-250	-2281	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAGAATAACTTATTGT	NA	False	NA	-10	True	AATAAA	-19	NA	46874897	46865491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
Isoform_31225_24	chr18	-	2451	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	26	668	-8	660	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGCTATGATTGCTC	NA	False	NA	-2	True	AATAAA	-14	NA	49888642	49829879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_31228_25	chr18	-	1791	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	26	1328	-8	0	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTATAAGTAGCTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	49888642	49830539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
Isoform_31229_3	chr18	-	2285	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	-35	-766	-1	660	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGCTATGATTGCTC	NA	False	NA	-2	True	AATAAA	-14	NA	49888669	49829879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
Isoform_31230_5	chr18	-	2196	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-42	-765	-8	659	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGCTATGATTGCT	NA	False	NA	-3	True	AATAAA	-13	NA	49888676	49829880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
Isoform_31232_163	chr18	-	1291	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	102	10	102	-10	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGGACTTTTTTTTG	NA	False	NA	-21	True	ATTAAA	-10	NA	53551085	53539413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
Isoform_31234_3	chr18	-	3392	3	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	103	-10	intron_retention	FALSE	canonical	3	375	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGGACTTTTTTTTG	NA	False	NA	-21	True	ATTAAA	-10	NA	53551084	53539413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_53540138_53542196_53544692_53550911
Isoform_31236_50	chr18	-	4565	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-11	0	5	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877630	53814794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_31237_31	chr18	-	4592	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-41	3	20	-3	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGGTCGGTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	53877660	53814797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_31238_9	chr18	-	4683	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-132	3	-71	-3	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGGTCGGTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	53877751	53814797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
Isoform_31241_3	chr18	-	1131	2	FSM	ENSMUSG00000048799.9	ENSMUST00000235928.2	474	2	-49	-608	19	608	multi-exon	FALSE	canonical	3	229	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53877661	53876390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_53877420_53877559
Isoform_31243_187	chr18	-	1866	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	45	3	-38	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695336	56659818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_31244_221	chr18	-	1842	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	69	3	-14	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695312	56659818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_31245_20	chr18	-	1983	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	-72	3	-53	-3	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	NA	False	NA	-8	True	ATTAAA	-27	NA	56695453	56659818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
Isoform_31249_94	chr18	-	2056	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	50	2025	50	-3	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGGTTTGGTGAGTT	2904	False	NA	-8	True	ATTAAA	-27	NA	56705973	56659818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
Isoform_31253_10	chr18	-	1152	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	6	1242	6	539	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATATTTTGTCAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	57108434	57090146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
Isoform_31254_3	chr18	-	2387	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	6	7	6	-7	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACCAAAAACTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	57108434	57088911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
Isoform_31255_5	chr18	-	1566	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	356	68	-55	-68	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAAGCTTTTCTTT	NA	False	NA	-21	True	AATAAA	-13	NA	60634703	60607330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_60608658_60634464
Isoform_31256_5	chr18	-	1490	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	432	68	21	-68	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAAGCTTTTCTTT	NA	False	NA	-21	True	AATAAA	-13	NA	60634627	60607330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_60608658_60634464
Isoform_31259_30	chr18	-	4593	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-6	8	-6	-8	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAAAGGTTTGCCTTCC	NA	False	NA	-26	True	AATAAA	-9	NA	60982007	60946834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_3126_94	chr10	+	1213	5	FSM	ENSMUSG00000020307.16	ENSMUST00000218964.2	979	5	-232	-2	47	2	multi-exon	FALSE	canonical	3	168	junction_4	778.055749930556	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79518075	79524230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
Isoform_31262_25	chr18	-	4484	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	37	8	-5	-8	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAAAGGTTTGCCTTCC	NA	False	NA	-26	True	AATAAA	-9	NA	60982006	60946834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_31275_354	chr18	-	4015	23	ISM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	5	2246	5	-4	5prime_fragment	FALSE	canonical	2	549	junction_6	216.459776195818	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACTGCTTTCCAGT	NA	False	NA	0	True	AAAAAG	-17	NA	60981996	60949072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_31276_189	chr18	-	4045	23	ISM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-26	2247	4	-5	5prime_fragment	FALSE	canonical	2	549	junction_6	216.459776195818	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTGACTGCTTTCCAG	NA	False	NA	-1	True	AAAAAG	-16	NA	60982027	60949073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_31284_594	chr18	-	3938	22	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	16	2246	4	-4	5prime_fragment	FALSE	canonical	2	677	junction_6	175.197161368197	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACTGCTTTCCAGT	NA	False	NA	0	True	AAAAAG	-17	NA	60982027	60949072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_31288_24	chr18	-	3794	21	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	2	235	junction_11	252.184034982391	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACTGCTTTCCAGT	NA	False	NA	0	True	AAAAAG	-17	NA	60982027	60949072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
Isoform_3129_20	chr10	+	1211	5	FSM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-220	-457	47	-1	multi-exon	FALSE	canonical	3	123	junction_4	797.39838694344	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518075	79524231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523689
Isoform_31295_7	chr18	-	3350	14	FSM	ENSMUSG00000052026.9	ENSMUST00000025520.10	3366	14	14	2	-2	-2	multi-exon	FALSE	canonical	2	6	junction_10	5.15671561910596	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTACCTGACTCTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	61147280	61128453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
Isoform_31296_425	chr18	-	1769	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	995	junction_1	57.5	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTGCCATCCTTTCTCG	7734	False	NA	-6	True	ATTAAA	-21	NA	61169291	61151934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61153014_61153445_61153592_61168747
Isoform_31298_45	chr18	-	5085	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	17	1	0	-1	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGCCTGTTCAATGC	5841	False	NA	-6	True	AATAAA	-28	NA	61310105	61264349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31299_45	chr18	-	5182	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-39	-12	-3	-3	multi-exon	FALSE	canonical	3	101	junction_18	18.508813502905	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGAGCCTGTTCAAT	5838	False	NA	-8	True	AATAAA	-26	NA	61310108	61264351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31301_10	chr18	-	5093	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.4747915271053	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGAGCCTGTTCAAT	5829	False	NA	-8	True	AATAAA	-26	NA	61310117	61264351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274046_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31302_13	chr18	-	5186	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_6	35.9608898050071	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGAGCCTGTTCAAT	5832	False	NA	-8	True	AATAAA	-26	NA	61310114	61264351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274046_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31303_3	chr18	-	2917	7	ISM	ENSMUSG00000024622.9	ENSMUST00000236068.2	4597	18	-1	25049	-1	1186	5prime_fragment	FALSE	canonical	3	101	junction_5	13.6869767784319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAATCTCCTCT	5840	False	NA	NA	False	AATAAA	-6	NA	61310106	61289413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31304_8	chr18	-	2052	4	ISM	ENSMUSG00000024622.9	ENSMUST00000237443.2	3410	12	-2	17113	-2	1385	5prime_fragment	FALSE	canonical	3	101	junction_2	14.6969384566991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAAGCTC	5844	False	NA	NA	False	AATAAA	-12	NA	61310102	61299477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_61300766_61304279_61304455_61305222_61305359_61309649
Isoform_31305_10	chr18	-	3490	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	23	4301	23	2	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATGAA	8738	False	NA	NA	False	NA	NA	NA	61344661	61330291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
Isoform_31308_7	chr18	-	3532	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	-21	4303	-21	0	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATG	8694	False	NA	NA	False	NA	NA	NA	61344705	61330293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
Isoform_31310_71	chr18	-	3614	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	16	26	-15	-26	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	3309	False	NA	NA	False	AAAAAG	-11	NA	61533486	61431232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
Isoform_31313_11	chr18	-	3666	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	-38	28	-38	-28	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAGAAAAAAAAAAAAA	3255	False	NA	NA	False	AAAAAG	-9	NA	61533540	61431234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
Isoform_31316_25	chr18	-	2039	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-21	-1	-21	1	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	0	True	TATAAA	-17	NA	61840727	61829906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
Isoform_31317_51	chr18	-	4009	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	14	15	14	-15	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAAAAACACCTCT	NA	False	NA	-17	True	AATATA	-31	NA	61859380	61845509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
Isoform_31319_95	chr18	-	1434	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	14	2590	14	-3	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTTACAGTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	61859380	61848084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
Isoform_31323_3	chr18	-	3401	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	41	2	-1	-2	multi-exon	TRUE	canonical	1	2	junction_17	8.65740245593045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTCAGAGGGTAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	61919732	61863333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
Isoform_31324_3	chr18	-	1697	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49255	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61870427	61863331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
Isoform_31325_43	chr18	-	4295	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-37	-4	-37	4	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAGAGCATTTCTAGT	NA	False	NA	-44	True	AATAAA	-20	NA	62681803	62637221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_31326_20	chr18	-	4375	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-34	-87	-34	87	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTTGCCATGGA	NA	False	NA	39	True	AATAAA	-10	NA	62681800	62637138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_31327_5	chr18	-	4243	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681800	62637229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_31328_3	chr18	-	4340	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	85	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTATTCTTGCCATG	NA	False	NA	37	True	AATAAA	-8	NA	62681808	62637140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_31329_17	chr18	-	4293	22	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-40	-4	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	62.0483682299543	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681806	62637229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_31330_9	chr18	-	4376	22	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	87	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	62.0483682299543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTTGCCATGGA	NA	False	NA	39	True	AATAAA	-10	NA	62681798	62637138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_31331_4	chr18	-	4251	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-39	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_8	75.834346259214	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681805	62637229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_31332_6	chr18	-	4142	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-26	87	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTTGCCATGGA	NA	False	NA	39	True	AATAAA	-10	NA	62681792	62637138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
Isoform_31334_5	chr18	-	4028	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-44	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	77.8143613347303	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGAGTTTCCAGAGCA	NA	False	NA	-52	True	AATAAA	-12	NA	62681810	62637229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
Isoform_31337_15	chr18	-	1249	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	85	3009	-30	-3	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTCGTCATTCTATA	NA	False	NA	-4	True	AATAAA	-22	NA	63825423	63797173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_31339_7	chr18	-	1319	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	11	3013	11	-1	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAGTCTTCGTCATTC	NA	False	NA	-8	True	AATAAA	-18	NA	63825497	63797177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
Isoform_31340_42	chr18	-	2904	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	32	3635	5	712	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAACATTTCTTTGAGT	NA	False	NA	-7	True	NA	NA	NA	64622139	64589619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
Isoform_31341_160	chr18	-	2185	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	32	4354	5	-3	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTTTGCTGTGTACGC	NA	False	NA	-8	True	AATAAA	-12	NA	64622139	64590338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
Isoform_31345_14	chr18	-	2066	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-8	1	2	-1	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGCTGTGTACGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	64622142	64590336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
Isoform_3135_78	chr10	+	1269	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540316	79547803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
Isoform_31351_185	chr18	-	2572	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	109	6	0	-6	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649570	64632734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
Isoform_31355_240	chr18	-	2036	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	93	558	0	2	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATGGTCTGACATCCA	NA	False	NA	-13	True	AATAAA	-23	NA	64649586	64633286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
Isoform_31361_367	chr18	-	2025	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	153	567	0	-1	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGTCTGACATCCAGT	NA	False	NA	-11	True	AATAAA	-25	NA	64649570	64633284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
Isoform_31362_232	chr18	-	2575	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	153	17	0	-6	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649570	64632734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
Isoform_31365_214	chr18	-	2603	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	125	17	1	-6	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACCAAAACACTT	NA	False	NA	NA	False	AATAAA	-14	NA	64649598	64632734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
Isoform_3138_3	chr10	+	1719	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	1	235	1	-212	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	79613106	79618229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
Isoform_31386_211	chr18	-	3545	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	18	18	0	1	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135692	66113826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
Isoform_31388_72	chr18	-	1727	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	18	2931	0	572	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTCATAGTACTAC	NA	False	NA	-2	True	AATAAA	-16	NA	66135692	66116758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
Isoform_31389_54	chr18	-	4657	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	20	-1	-1	1	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135690	66113826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
Isoform_3139_8	chr10	+	2624	9	FSM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	19	8	19	-8	multi-exon	FALSE	canonical	1	2	junction_7	77.7495980697007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629424	79656722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
Isoform_31393_5	chr18	-	2231	11	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	13.4104436913922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTTTGGATCTTTTC	NA	False	NA	-2	True	GATAAA	-20	NA	67378365	67358116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
Isoform_31394_4	chr18	-	2289	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	198	7	35	-7	multi-exon	FALSE	canonical	3	17	junction_4	12.1016527796826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAGGAGTTTGGATCT	NA	False	NA	-6	True	GATAAA	-16	NA	67378703	67358120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_31396_13	chr18	-	2288	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.9348229982686	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTAAGGAGTTTGGATC	NA	False	NA	-7	True	GATAAA	-15	NA	67378706	67358121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_31397_4	chr18	-	2184	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	15.4472419528736	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTTAAGGAGTTTGGAT	NA	False	NA	-8	True	GATAAA	-14	NA	67378712	67358122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
Isoform_31398_830	chr18	-	3114	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-20	0	-20	0	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582262	67537833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
Isoform_31399_56	chr18	-	3149	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-55	0	-55	0	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582297	67537833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
Isoform_3140_384	chr10	+	2511	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	0	8	0	-8	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629405	79656722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
Isoform_31404_3	chr18	-	3790	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-79	-1090	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCATGTTAGTAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	67743939	67622933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
Isoform_31405_9	chr18	-	2582	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-197	1191	-197	-1190	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTAAGATCTGTTA	633	False	NA	NA	False	AATAAA	-34	NA	67774603	67752060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_31406_4	chr18	-	3778	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-198	-4	-198	4	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGATGTCTTGACTTT	632	False	NA	0	True	AATAAA	-22	NA	67774604	67750865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
Isoform_31407_13	chr18	-	3610	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-30	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	23.8649783172465	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTCTTGACTTTT	800	False	NA	1	True	AATAAA	-23	NA	67774436	67750864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771336_67771412_67773077_67773234_67774181
Isoform_31410_4	chr18	-	3695	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-119	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	23.8649783172465	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTGGATGTCTTGAC	711	False	NA	-3	True	AATAAA	-19	NA	67774525	67750868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771336_67771412_67773077_67773234_67774181
Isoform_31411_105	chr18	-	1547	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	22	-1	7	0	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGTTTGTGTGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	67857636	67798580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_31416_6	chr18	-	2692	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	-22	-3	-22	3	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCCCTTACCTTTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	67857687	67804278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_31418_7	chr18	-	2612	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	51	4	29	-4	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTACATTGTCCCTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	67857614	67804285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
Isoform_31420_12	chr18	-	3409	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	116	6126	-15	-6126	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCGAGTTCTCCATTG	NA	False	NA	-1	True	AATAAA	-19	NA	68433288	68399383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_31422_9	chr18	-	3948	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	114	5589	-17	-5589	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCTCCCTGACCTATT	NA	False	NA	0	True	AATAAA	-18	NA	68433290	68398846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_31423_22	chr18	-	2114	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	116	7421	-15	-7421	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTTTCTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	68433288	68400678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_31424_6	chr18	-	3309	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	80	6262	-51	-6262	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAGAATATCACATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	68433324	68399519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_31426_7	chr18	-	1569	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	81	8001	-50	7729	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATCTTTTAAAGTGGT	NA	False	NA	NA	False	TATAAA	-25	NA	68433323	68401258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
Isoform_31427_4	chr18	-	2928	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	68.2567533288831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_31428_7	chr18	-	3501	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605554	70585280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_31429_12	chr18	-	3221	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	0	-930	0	2	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605551	70585280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_3143_7	chr10	+	2426	5	FSM	ENSMUSG00000035852.12	ENSMUST00000046833.5	2414	5	-12	0	-12	0	multi-exon	FALSE	canonical	1	2	junction_1	3.57071421427143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658448	79666286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79658521_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_31431_3	chr18	-	2921	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	65.9430388668887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605551	70585285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_31432_5	chr18	-	3485	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605544	70585282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
Isoform_31435_54	chr18	-	2828	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-98	6	32	-1	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663307	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
Isoform_31437_122	chr18	-	2430	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	165	-4	-1	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCACTGTAAGTTGTG	NA	False	NA	-12	True	AATAAA	-23	NA	70663340	70641750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
Isoform_31438_9	chr18	-	2860	10	NNC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	99.7728283850399	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663342	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70662821
Isoform_3144_7	chr10	+	2432	5	NIC	ENSMUSG00000035852.12	novel	2414	5	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.24264068711928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658496	79666286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_79658575_79661529_79663269_79663711_79663846_79665226_79665266_79665844
Isoform_31440_36	chr18	-	2419	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	93.0357690406634	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663338	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
Isoform_31442_10	chr18	-	2708	9	NIC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	26	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	108.347747438514	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663313	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70662821
Isoform_31443_61	chr18	-	2298	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663340	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
Isoform_31444_15	chr18	-	2350	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-53	-1	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663392	70641756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
Isoform_31448_3	chr18	-	2327	6	ISM	ENSMUSG00000024515.14	ENSMUST00000114939.2	2233	11	19547	-1198	4091	206	3prime_fragment	FALSE	canonical	3	378	junction_1	18.5299757150408	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTG	NA	False	NA	7	True	NA	NA	NA	73791755	73771873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638
Isoform_31449_105	chr18	-	2500	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	0	138	0	-138	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTCAGTTACATTATC	371	False	NA	-1	True	AATAAA	-19	NA	73948509	73903111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_3145_1258	chr10	+	2835	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	204	71	-2	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1587	False	NA	33	True	ATTAAA	-17	NA	79690464	79700195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31451_17	chr18	-	2825	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	0	-187	0	187	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	371	False	NA	NA	False	NA	NA	NA	73948509	73902786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_31453_9	chr18	-	2581	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-81	138	-70	-138	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTCAGTTACATTATC	290	False	NA	-1	True	AATAAA	-19	NA	73948590	73903111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_31454_9	chr18	-	2040	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-69	667	-58	-667	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGGTGTCATCTGTGGT	302	False	NA	-4	True	AAAAAG	-15	NA	73948578	73903640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
Isoform_31459_7	chr18	-	4618	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	-26	2	-26	-2	multi-exon	FALSE	canonical	3	19	junction_5	8.45221864364617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCAGGAATTGTCAC	9792	False	NA	NA	False	AATAAA	-17	NA	74198026	74061558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
Isoform_3146_804	chr10	+	2909	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	204	-3	-2	3	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1587	False	NA	26	True	AATAAA	-16	NA	79690464	79700269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31460_6	chr18	-	4817	6	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	6.68131723539603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCAGGAATTGTCAC	9392	False	NA	NA	False	AATAAA	-17	NA	74198426	74061558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74198111
Isoform_31461_5	chr18	-	2575	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	33	-3	-6	3	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATGGTGGCTTCCTGC	6759	False	NA	-5	True	NA	NA	NA	74340856	74328366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_31462_99	chr18	-	1083	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	39	1483	0	-303	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCATATATATTTTCAAAA	6765	False	NA	-24	True	AGTAAA	-11	NA	74340850	74329852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
Isoform_31464_11	chr18	-	1088	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-4	-296	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCAAAACGTACTG	6793	False	NA	-17	True	AGTAAA	-18	NA	74340822	74329845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
Isoform_31466_3	chr18	-	3787	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	1.89215404065849	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGTCCTGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	75094334	75072392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
Isoform_31467_3	chr18	-	2359	12	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	-88	-3694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.74238238709061	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCGTCCTTGCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	75830713	75567988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770413_75830462
Isoform_31468_3	chr18	-	1639	13	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	14041	-858	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	7.91754381105656	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTGTCAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	77120898	77081752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
Isoform_31469_4	chr18	-	1680	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	19	5601	-2	1182	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77652813	77549406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
Isoform_3147_44	chr10	+	2881	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	158	71	-20	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1541	False	NA	33	True	ATTAAA	-17	NA	79690418	79700195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31470_4	chr18	-	5195	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-64	-6	-14	6	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	-2	True	AATAAA	-21	NA	77801697	77719186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
Isoform_31472_8	chr18	-	4990	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGACTCTTTCTGAGA	NA	False	NA	-7	True	AATAAA	-16	NA	77801665	77719191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
Isoform_31473_4	chr18	-	4944	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	-9	7	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTCTGAGAATGTTT	NA	False	NA	-1	True	AATAAA	-22	NA	77802195	77719185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
Isoform_31474_3	chr18	-	2490	2	ISM	ENSMUSG00000047466.11	ENSMUST00000237203.2	1606	5	-2	37394	-2	-4	5prime_fragment	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAGATCCCATTGTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	77802188	77760076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_77762381_77802002
Isoform_31475_405	chr18	-	988	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	16	-1	16	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855464	77845266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
Isoform_31477_6	chr18	-	2330	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	1190	junction_4	90.0729642505946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATTTCTTGTTATCT	NA	False	NA	-7	True	AATACA	-13	NA	77855489	77845273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
Isoform_31482_48	chr18	-	5001	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	4	7	4	-7	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACATTACTCTTAAGTC	5940	False	NA	80	True	AATAAA	-22	NA	80194693	80169532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
Isoform_31485_3	chr18	-	4487	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-209	734	-209	-734	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCTTTATGGTGCAA	5727	False	NA	-27	True	AATAAA	-15	NA	80194906	80170259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
Isoform_31487_286	chr18	-	1357	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	21	-1	21	1	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGTGTATACGCACA	NA	False	NA	-2	True	AATAAA	-21	NA	80243852	80235478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
Isoform_31489_4	chr18	-	719	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-30	415	-30	-415	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTGACTACTTACCAA	NA	False	NA	NA	False	AATAAA	-16	NA	80280078	80273387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
Isoform_31490_273	chr18	-	3701	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	3	9	3	-3	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCTGTGTGTTCTCTG	NA	False	NA	-12	True	AATAAA	-9	NA	80512907	80451182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
Isoform_31491_8	chr18	-	3548	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.0249406744333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGTTCTCTGGTGT	NA	False	NA	-8	True	AATAAA	-13	NA	80512913	80451178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
Isoform_31492_4	chr18	-	4452	30	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	40.1573599143584	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCATCCATCCCAGATG	9772	False	NA	-48	True	AATAAA	-6	NA	80977247	80778307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793142_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920583_80935024_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_31493_19	chr18	-	4466	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	8	676	-2	9	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGCCTTTGTTCTTA	9754	False	NA	-21	True	AATAAA	-33	NA	80977265	80778280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
Isoform_31495_12	chr18	-	4125	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	110	2844	110	2	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	TTTAAA	-33	NA	81029876	81012434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
Isoform_31496_6	chr18	-	4345	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-131	0	104	0	multi-exon	FALSE	canonical	3	38	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGGAAAG	NA	False	NA	NA	False	TTTAAA	-31	NA	81029882	81012436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_81013120_81014395_81017845_81029669
Isoform_31497_3	chr18	-	4214	8	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	30079	7	-1000	-7	3prime_fragment	FALSE	canonical	3	22	junction_4	6.08779307218929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGGTGGTGGTGTAC	NA	False	NA	NA	False	AATAAA	-13	NA	84577550	84225832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451
Isoform_31498_5	chr18	-	2444	2	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	-1	352970	-1	-7762	5prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGATAAAAAAGAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	84607630	84578795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_84581172_84607562
Isoform_31501_37	chr18	-	2120	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	32	0	32	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84700152	84685593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
Isoform_31506_559	chr18	-	2041	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	79	4	4	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84703748	84685593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
Isoform_31507_88	chr18	-	2084	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	36	4	36	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84703791	84685593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
Isoform_31511_18	chr18	-	1304	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	17	1097	0	0	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTAAAAGCATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84969632	84965412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
Isoform_31514_16	chr18	-	2790	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-32	-1754	-3	-1	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912466	88886619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
Isoform_31516_50	chr18	-	2768	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	45	1	3	-1	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912431	88886619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
Isoform_31518_16	chr18	-	3072	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	13	-271	0	-50	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGATCTGAATAGAAAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88912463	88886347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
Isoform_31521_21	chr18	-	2726	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-17	3327	0	-1	multi-exon	FALSE	canonical	3	70	junction_1	76	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAAATTGTTGCCTTT	NA	False	NA	-6	True	ATTAAA	-24	NA	88912463	88886619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_31523_7	chr18	-	3019	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-38	3055	-8	-50	multi-exon	FALSE	canonical	3	70	junction_1	76	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGATCTGAATAGAAAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88912484	88886347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905332_88905458_88912285
Isoform_31525_4	chr18	-	2730	3	FSM	ENSMUSG00000056153.16	ENSMUST00000123826.2	2921	3	-126	317	-3	4	multi-exon	FALSE	canonical	3	11	junction_1	105.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTTGCCTTTTCTGT	NA	False	NA	-1	True	ATTAAA	-29	NA	88912466	88886614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_88889043_88905336_88905458_88912285
Isoform_31526_4	chr18	-	2096	12	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	-28996	31775	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	69.1889256891342	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTGTTCTCT	NA	False	NA	NA	False	AATAAA	-26	NA	34054023	33978232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_33979333_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
Isoform_31527_5	chr18	-	824	6	NNC	ENSMUSG00000024357.11	novel	342	3	NA	NA	0	8116	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	60.4072843289615	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCCGAATCTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	35631947	35473580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_35473827_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
Isoform_31528_3	chr18	-	639	3	NNC	ENSMUSG00000024477.5	novel	1039	2	NA	NA	-1	5193	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAAGAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	46413898	46401364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_46401733_46407656_46407776_46413746
Isoform_31529_3	chr18	-	408	3	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	20	junction_2	4.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTTCCTATATTTTC	NA	False	NA	-14	True	AATAAA	-17	NA	82883997	82873436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_-_82873610_82875076_82875202_82883887
Isoform_31530_65	chr18	+	2856	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAATA	-35	True	NA	73	True	ATTAAA	-29	NA	3382987	3435386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_31532_4	chr18	+	2918	22	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	266.031795279762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAATA	-7	True	NA	73	True	ATTAAA	-29	NA	3383236	3435386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_31534_233	chr18	+	2830	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	7	991	7	1	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAATA	-5	True	NA	73	True	ATTAAA	-29	NA	3383238	3435386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_31537_4	chr18	+	2827	21	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	207.334819796386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAATA	-4	True	NA	73	True	ATTAAA	-29	NA	3383239	3435386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414131_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
Isoform_31539_15	chr18	+	2287	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	-860	3647	-860	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	NA	False	NA	24	True	AATATA	-19	NA	3507062	3512757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_3508286_3511256_3511545_3511981
Isoform_31540_79	chr18	+	1421	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	3	3650	3	-3650	multi-exon	FALSE	canonical	3	117	junction_2	19.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAGTGGTGTCTTTCA	-5	True	NA	21	True	AATATA	-16	NA	3507925	3512754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_3508286_3511256_3511545_3511981
Isoform_31543_12	chr18	+	2107	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	11	-8	0	8	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTTCTATTTTTCA	-1	True	NA	26	True	AATAAA	-28	NA	4375602	4396793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31544_5	chr18	+	2643	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	11	-544	0	1	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31546_5	chr18	+	1972	10	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	69.4482665614849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCTCTAGTATCTATTT	-1	True	NA	15	True	AATAAA	-17	NA	4375602	4396782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387008_4387127_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31547_155	chr18	+	2095	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11	545	0	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31548_64	chr18	+	2639	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11	1	0	1	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31550_6	chr18	+	1918	9	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	68.9746330182336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	-1	True	NA	16	True	AATAAA	-18	NA	4375602	4396783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387127_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31552_15	chr18	+	2080	9	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31553_9	chr18	+	2624	9	NIC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31554_23	chr18	+	2074	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	7	545	0	-2	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	-1	True	NA	16	True	AATAAA	-18	NA	4375602	4396783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31555_17	chr18	+	2620	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	7	-1	0	1	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATAACAGTATTTCT	-1	True	NA	16	True	AATAAA	-17	NA	4375602	4397329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
Isoform_31558_9	chr18	+	659	5	ISM	ENSMUSG00000024236.19	ENSMUST00000138258.8	1430	8	-182	11669	-17	-240	5prime_fragment	FALSE	canonical	3	34	junction_1	22.0383189014044	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAGGTAAAGTATTT	-25	True	NA	NA	False	AAGAAA	-34	NA	4920522	5046637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588
Isoform_31559_11	chr18	+	542	4	ISM	ENSMUSG00000024236.19	ENSMUST00000126977.8	7907	38	-8	72654	-8	-240	5prime_fragment	FALSE	canonical	3	35	junction_1	20.6774165590278	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAGGTAAAGTATTT	-16	True	NA	NA	False	AAGAAA	-34	NA	4920531	5046637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588
Isoform_3156_683	chr10	+	2756	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	3	410	-1	2	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1588	False	NA	33	True	ATTAAA	-17	NA	79690465	79700195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31561_4	chr18	+	3503	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	27	2271	0	392	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCCGGGTG	5	True	NA	NA	False	NA	NA	NA	5591890	5773196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
Isoform_31563_264	chr18	+	2225	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	44	4246	-14	943	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	-7	True	NA	19	True	ATTAAA	-16	NA	6765188	6790183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
Isoform_31566_5	chr18	+	2353	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	55	4107	-3	1082	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGTGTCTAGAGAGGT	4	True	NA	100	True	AATATA	-15	NA	6765199	6790322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
Isoform_31569_34	chr18	+	3076	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-5	-1	0	1	multi-exon	TRUE	canonical	3	146	junction_1	117.532571338518	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	2	True	NA	NA	False	AATAAA	-9	NA	7868844	7927068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_3157_479	chr10	+	2794	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	39	336	0	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1624	False	NA	26	True	AATAAA	-16	NA	79690501	79700269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31570_14	chr18	+	3528	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-5	-453	0	1	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	2	True	NA	NA	False	AATAAA	-23	NA	7868844	7927520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31572_6	chr18	+	2767	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	2	True	NA	NA	False	AATAAA	-9	NA	7868844	7927068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31573_3	chr18	+	3211	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTACCTTGGCTTTT	7	True	NA	NA	False	AATAAA	-20	NA	7868849	7927517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31574_39	chr18	+	3249	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-1	1960	0	1	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACACATTTTGTTACT	11	True	NA	NA	False	AATAAA	-9	NA	7869195	7927068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31578_23	chr18	+	3701	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-1	1508	0	1	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACCTTGGCTTTTTTT	11	True	NA	NA	False	AATAAA	-23	NA	7869195	7927520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_3158_178	chr10	+	2783	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-24	410	0	2	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31580_11	chr18	+	3443	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-349	0	-52	0	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	-2	True	NA	NA	False	AATAAA	-22	NA	7869143	7927519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31583_3	chr18	+	3495	14	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	-42	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	149.506288086872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTACCTTGGCTTTTT	312	False	NA	NA	False	AATAAA	-21	NA	7869673	7927518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
Isoform_31584_6	chr18	+	3375	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	-25	4674	-25	-29	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTAATCTGTCCAGC	1	False	NA	NA	False	AATAAA	-19	NA	9707569	9877970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
Isoform_31585_5	chr18	+	2283	2	FSM	ENSMUSG00000024287.9	ENSMUST00000234805.2	2047	2	-12	-224	5	1	multi-exon	FALSE	canonical	3	860	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAACAGC	1	True	NA	NA	False	NA	NA	NA	9958167	9961301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_9958247_9959097
Isoform_31586_6	chr18	+	2190	3	ISM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	-1	-128	-1	-1	intron_retention	FALSE	canonical	3	775	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAATTAAAAAAAAAAAACA	9	True	NA	NA	False	NA	NA	NA	9958175	9961299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_9958247_9959097_9959172_9959254
Isoform_31587_5	chr18	+	1021	4	FSM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	0	-130	0	1	multi-exon	FALSE	canonical	3	775	junction_2	35.5621521658443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAACAGC	10	True	NA	NA	False	NA	NA	NA	9958176	9961301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485
Isoform_3159_135	chr10	+	2849	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-16	336	8	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1569	False	NA	26	True	AATAAA	-16	NA	79690446	79700269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
Isoform_31591_248	chr18	+	2099	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	271	1764	0	0	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_31594_17	chr18	+	2303	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	7	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTGGCTGGTGCTCCA	10	True	NA	21	True	AATAAA	-21	NA	9958176	9993732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_31595_4	chr18	+	1977	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	13	True	NA	14	True	AATAAA	-14	NA	9958179	9993725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
Isoform_31597_282	chr18	+	567	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	32	259	11	16	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	0	True	NA	-13	True	AATAAA	-15	NA	10617806	10627971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_31598_75	chr18	+	827	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	32	-1	11	1	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	0	True	NA	9	True	AATAAA	-16	NA	10617806	10628231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_31600_138	chr18	+	595	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	4	259	4	16	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	-28	True	NA	-13	True	AATAAA	-15	NA	10617778	10627971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_31603_24	chr18	+	850	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	9	-1	9	1	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	-23	True	NA	9	True	AATAAA	-16	NA	10617783	10628231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
Isoform_31607_20	chr18	+	434	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	21	-16	21	16	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	10	True	NA	-13	True	AATAAA	-15	NA	10617816	10627971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
Isoform_31612_46	chr18	+	3258	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-48	-1	-2	1	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAAAATGTGGATGT	3243	False	NA	10	True	ATTAAA	-32	NA	11790437	11875936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_31613_15	chr18	+	3383	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-49	-125	-3	125	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTAGTCTATAATTTA	3242	False	NA	10	True	NA	NA	NA	11790436	11876060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_31615_3	chr18	+	3197	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-2	118	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGCTGTTGTAGTCTA	3702	False	NA	3	True	NA	NA	NA	11790896	11876053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_31616_8	chr18	+	3075	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAAAATGTGGATGT	3707	False	NA	10	True	ATTAAA	-32	NA	11790901	11875936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
Isoform_31618_54	chr18	+	3069	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	323	4	269	-4	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAATGTGTGTGTGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	11972599	12078679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_31619_28	chr18	+	3148	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	246	2	192	-2	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972522	12078681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_31621_3	chr18	+	3245	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	151	0	97	0	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTGTGTGAACATG	NA	False	NA	NA	False	ATTAAA	-25	NA	11972427	12078683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_31622_9	chr18	+	2992	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	270	-60	270	-2	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972600	12078681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
Isoform_31623_163	chr18	+	3087	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	14	689	0	-3	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGTTCATTGTGTGGT	5519	False	NA	7	True	ATTAAA	-19	NA	12261811	12289755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
Isoform_31626_5	chr18	+	2957	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	114.557142260861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTCATTGTGTGGTTA	5523	False	NA	9	True	ATTAAA	-21	NA	12261815	12289757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
Isoform_31630_398	chr18	+	2122	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	19	29	-3	1	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTAATAAAGTACC	NA	False	NA	NA	False	AATAAA	-16	NA	12301792	12323025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
Isoform_31632_6	chr18	+	2310	19	FSM	ENSMUSG00000024410.16	ENSMUST00000127123.8	2297	19	-20	7	-7	0	multi-exon	FALSE	canonical	3	252	junction_9	24.871831952861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301788	12323024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
Isoform_31634_9	chr18	+	1979	14	FSM	ENSMUSG00000024424.16	ENSMUST00000169401.8	1950	14	-27	-2	3	2	multi-exon	FALSE	canonical	1	3	junction_1	13.7926315977239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	4	True	AATAAA	-18	NA	12732955	12870109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12733061_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_31635_7	chr18	+	2599	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	-25	1811	-25	2	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	4	True	AATAAA	-18	NA	12776375	12870109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_31636_35	chr18	+	2119	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	455	1811	437	2	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGACCTTGCAGGAGC	NA	False	NA	4	True	AATAAA	-18	NA	12776855	12870109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
Isoform_31640_398	chr18	+	3413	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	349	1	0	-1	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTATGGCTACATTGC	NA	False	NA	15	True	NA	NA	NA	13105328	13126006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
Isoform_31646_6	chr18	+	3553	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	207	3	-142	-3	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	13	True	NA	NA	NA	13105186	13126004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
Isoform_31649_24	chr18	+	1672	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	18	2	18	-2	multi-exon	FALSE	canonical	3	86	junction_2	7.18795288428261	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATAGAGTGTCTCCTTC	NA	False	NA	8	True	NA	NA	NA	14839225	14895353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
Isoform_31650_4	chr18	+	2175	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	12	-495	12	492	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAATGAAA	NA	False	NA	NA	False	AATAAA	-25	NA	14839219	14895850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
Isoform_31651_27	chr18	+	4421	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	2	711	2	-711	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGCAGCAGTTTCT	NA	False	NA	19	True	ATTAAA	-25	NA	14916303	15032705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
Isoform_31657_3	chr18	+	1096	7	FSM	ENSMUSG00000044393.16	ENSMUST00000121837.2	953	7	-146	3	26	-3	multi-exon	FALSE	canonical	3	147	junction_4	16.303544263612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTGTGTTCTT	NA	False	NA	NA	False	ACTAAA	-21	NA	20691156	20715970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764
Isoform_31662_4	chr18	+	5696	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	72	-2	-9	2	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTCCATGTCTTC	NA	False	NA	12	True	AATAAA	-21	NA	20691202	20737580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
Isoform_31664_16	chr18	+	1345	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-8	11	-8	-11	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTAAGCTGG	5333	False	NA	NA	False	NA	NA	NA	21077673	21116908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
Isoform_31667_3	chr18	+	3843	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	-41	-2396	-41	2258	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACCAAAACCAAAAA	1178	False	NA	NA	False	NA	NA	NA	21094487	21119177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
Isoform_31674_13	chr18	+	2493	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-73	2	-73	-2	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTTTGTAAAAAACCTT	NA	False	NA	8	True	AATAAA	-19	NA	21134324	21160590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31676_6	chr18	+	3167	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-56	-689	-56	0	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134341	21161281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31679_12	chr18	+	2352	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-45	695	-45	1	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134352	21160585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_31682_6	chr18	+	839	5	ISM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	48	6362	-35	-6212	5prime_fragment	FALSE	canonical	3	444	junction_2	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21135012	21154230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944
Isoform_31683_101	chr18	+	2234	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	32	5	32	3	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTTTTGTAAAAAAC	NA	False	NA	5	True	AATAAA	-16	NA	21134996	21160587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31685_6	chr18	+	2990	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-30	-689	-30	0	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134934	21161281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31687_12	chr18	+	2934	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	26	-689	26	0	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134990	21161281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31688_19	chr18	+	2284	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-12	-1	-12	1	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAAACCTTTTT	NA	False	NA	11	True	AATAAA	-22	NA	21134952	21160593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
Isoform_31693_9	chr18	+	2836	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-69	2	14	-1	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTGTGTCTTAATTAA	NA	False	NA	1	True	ATTAAA	-13	NA	21134978	21161279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_31695_27	chr18	+	2187	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-114	696	-31	1	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134933	21160585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_31696_44	chr18	+	2104	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-32	697	-32	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGCAGTTTTGTAAAA	NA	False	NA	2	True	AATAAA	-13	NA	21135015	21160584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_31697_9	chr18	+	2789	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21135027	21161281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
Isoform_31700_11	chr18	+	2151	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGCAGTTTTGTAAA	NA	False	NA	1	True	AATAAA	-12	NA	21135018	21160583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
Isoform_31701_11	chr18	+	2050	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-138	-143	-34	1	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21135013	21160585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
Isoform_31702_11	chr18	+	4015	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	8	3	8	-3	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTCTGGACTTATTC	NA	False	NA	11	True	AATAAA	-15	NA	23937048	24026911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
Isoform_31703_167	chr18	+	2522	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	12	1492	12	1	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTTGAAATTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	23937052	24025422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
Isoform_31706_3	chr18	+	5489	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	-28	11	-15	-11	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAAACATTTTGTGTG	NA	False	NA	11	True	GATAAA	-13	NA	24087733	24097719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
Isoform_31709_63	chr18	+	2368	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	26	646	26	-646	multi-exon	FALSE	canonical	3	128	junction_1	18.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	1085	False	NA	45	True	NA	NA	NA	24122714	24137787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24122789_24123234_24123448_24135706
Isoform_31710_25	chr18	+	3008	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	27	5	27	-5	multi-exon	FALSE	canonical	3	128	junction_1	18.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAAAATTTCTTACTG	1086	False	NA	NA	False	AATAAA	-21	NA	24122715	24138428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24122789_24123234_24123448_24135706
Isoform_31714_18	chr18	+	3722	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	193	193	1	-193	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGATTTTTGTACCCT	NA	False	NA	25	True	AATAAA	-18	NA	24339016	24419674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_31716_16	chr18	+	3917	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	192	-1	0	1	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGATACTCTGAGT	NA	False	NA	9	True	ATTAAA	-20	NA	24339015	24419868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
Isoform_31721_78	chr18	+	1045	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-18	38	0	-38	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	341	False	NA	9	True	AATAAA	-19	NA	24603907	24610817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_31723_3	chr18	+	1281	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-43	-173	-24	173	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGATAAATACCTGCCC	316	False	NA	NA	False	AGTAAA	-26	NA	24603882	24611028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
Isoform_31725_4	chr18	+	835	4	NIC	ENSMUSG00000024273.9	novel	1065	5	NA	NA	7	-38	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	88.1375188113565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	351	False	NA	9	True	AATAAA	-19	NA	24603917	24610817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_24604038_24604118_24604142_24608581_24608782_24610325
Isoform_31726_9	chr18	+	1008	4	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	-4	-38	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGACAGTTTTTATG	355	False	NA	9	True	AATAAA	-19	NA	24603921	24610817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
Isoform_31727_558	chr18	+	2767	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	3	696	1	1	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTGATTTTGCCTT	NA	False	NA	91	True	TTTAAA	-11	NA	24737020	24771868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
Isoform_31731_9	chr18	+	2504	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_19	197.717782026908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737038	24771865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
Isoform_31733_34	chr18	+	2759	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	143	1	-44	-1	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCCTGCCATTATTGA	NA	False	NA	14	True	ATTAAA	-14	NA	24786890	24834631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
Isoform_31737_13	chr18	+	4930	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	26	0	26	0	multi-exon	TRUE	canonical	3	28	junction_12	8.53414302799187	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842527	25266558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
Isoform_31738_7	chr18	+	2064	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	4	85321	1	16354	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTATGTTGAAATC	NA	False	NA	NA	False	AATAAA	-18	NA	25302080	25338644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
Isoform_31739_94	chr18	+	3122	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	130	5	5	1	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATATGCCTTGTTTTCC	NA	False	NA	7	True	AGTAAA	-18	NA	30405929	30481174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
Isoform_31741_10	chr18	+	3171	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	77	9	-46	-3	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTCATATGCCTTGTT	NA	False	NA	3	True	AGTAAA	-14	NA	30405876	30481170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
Isoform_31742_26	chr18	+	4053	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	-21	-2	-21	2	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6784	False	NA	10	True	AATAAA	-22	NA	31767402	31856116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_31743_25	chr18	+	4033	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-16	-2	-4	2	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	6801	False	NA	10	True	AATAAA	-22	NA	31767419	31856116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
Isoform_31745_3	chr18	+	2582	6	FSM	ENSMUSG00000041915.10	ENSMUST00000234500.2	2689	6	94	13	40	-13	multi-exon	FALSE	canonical	3	74	junction_2	13.4551105532433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACTAAAACAA	6961	False	NA	NA	False	NA	NA	NA	31892972	31910564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039
Isoform_31747_6	chr18	+	3451	9	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	47	-14	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	37.6345502829514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGTG	6968	False	NA	NA	False	TTTAAA	-11	NA	31892979	31915781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
Isoform_31751_6	chr18	+	4669	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	47	-1331	47	1331	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTCTGCCTCTG	6968	False	NA	6	True	AATAAA	-13	NA	31892979	31917127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
Isoform_31752_3	chr18	+	4799	8	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	-19	1339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.5206238267467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCTGTGTGACCA	6848	False	NA	14	True	AATAAA	-21	NA	31892859	31917135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909037_31909131_31911909_31912007_31913696
Isoform_31755_505	chr18	+	1045	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-30	0	-30	0	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922181	31929754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
Isoform_31757_7	chr18	+	949	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-31	-212	-30	0	multi-exon	FALSE	canonical	3	63	junction_2	315.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922181	31929754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31922298_31924892_31925074_31929102
Isoform_31758_12	chr18	+	2487	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-71	0	7	0	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	5662	False	NA	7	True	AATAAA	-18	NA	31937157	31968475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
Isoform_31764_5	chr18	+	3398	16	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-8	17789	0	3238	5prime_fragment	FALSE	canonical	3	169	junction_7	105.765442791532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCGTGTGTGTGTAT	5647	False	NA	NA	False	TTTAAA	-28	NA	31937142	32022661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122
Isoform_31765_58	chr18	+	4557	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-8	26	0	-26	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAATGTGATTTACTG	5647	False	NA	13	True	NA	NA	NA	31937142	32040424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
Isoform_31775_26	chr18	+	2794	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	11	6808	11	1	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCTCATCATTGTC	NA	False	NA	18	True	AATAAA	-19	NA	32200804	32230573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
Isoform_31776_9	chr18	+	642	3	FSM	ENSMUSG00000024383.10	ENSMUST00000234576.2	2989	3	0	2347	0	-2347	multi-exon	FALSE	canonical	3	11	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGGTATTTATTTC	NA	False	NA	NA	False	AAGAAA	-27	NA	32296141	32330002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32296604_32324953_32325024_32329892
Isoform_31777_70	chr18	+	2681	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	27	0	27	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373379	32403204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
Isoform_31778_6	chr18	+	2196	16	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	9.63788819653397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCGTGTCTTTCTT	NA	False	NA	16	True	AAAAAG	-23	NA	32510285	32568790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_31779_3	chr18	+	1961	14	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	10.0660540325881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510309	32568780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_31780_14	chr18	+	2131	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	-41	1	-26	-1	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510256	32568789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_31782_4	chr18	+	2000	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGGCGTGTCTTTCTTTG	NA	False	NA	18	True	AAAAAG	-25	NA	32510318	32568792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
Isoform_31783_3	chr18	+	2084	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	-49	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510233	32568791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
Isoform_31785_6	chr18	+	2030	14	FSM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	-54	-446	-54	-1	multi-exon	FALSE	canonical	2	3	junction_10	8.17631157710597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510228	32568789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_31786_6	chr18	+	1988	14	FSM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	-21	-437	-21	-4	multi-exon	FALSE	canonical	2	3	junction_10	8.17631157710597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510261	32568780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
Isoform_31787_3	chr18	+	1935	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	-44	-5	-29	1	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510253	32568791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_31788_3	chr18	+	1846	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	34	6	22	-4	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCCAGAACGAGGCG	NA	False	NA	6	True	AAAAAG	-13	NA	32510331	32568780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
Isoform_31790_98	chr18	+	2856	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	31	1568	3	-374	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGCTATGTGCCAAG	8995	False	NA	6	True	AATAAA	-17	NA	32970308	32999079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_31791_272	chr18	+	2807	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	80	1568	-6	-374	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGCTATGTGCCAAG	9044	False	NA	6	True	AATAAA	-17	NA	32970357	32999079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_31793_20	chr18	+	3251	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	31	1173	3	1	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCTTTTGATGAAACAG	8995	False	NA	35	True	ATTAAA	-28	NA	32970308	32999474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_31794_37	chr18	+	3182	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	71	1202	-15	-8	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATCAGTGGGTTCT	9035	False	NA	6	True	TATAAA	-19	NA	32970348	32999445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
Isoform_31796_14	chr18	+	2956	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	-58	8	0	-8	multi-exon	FALSE	canonical	3	29	junction_23	153.127237455201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATCAGTGGGTTCT	8992	False	NA	6	True	TATAAA	-19	NA	32970305	32999445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
Isoform_31797_4	chr18	+	839	2	ISM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-1	-1	1	intron_retention	FALSE	canonical	3	377	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGTGTATGTTGTGTGA	NA	False	NA	16	True	AATAAA	-20	NA	33927943	33929040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_33928178_33928435
Isoform_31798_72	chr18	+	441	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-1	-10	-1	10	multi-exon	FALSE	canonical	3	377	junction_1	24	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTGATTGGCGGCC	NA	False	NA	25	True	AATAAA	-29	NA	33927943	33929049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_33928178_33928435_33928499_33928905
Isoform_31800_8	chr18	+	871	5	ISM	ENSMUSG00000005871.16	ENSMUST00000170023.8	1825	11	-97	27688	-8	-4077	5prime_fragment	FALSE	canonical	3	88	junction_2	8.5146931829632	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATAGATAGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	34353968	34405567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491
Isoform_31801_5	chr18	+	1031	6	FSM	ENSMUSG00000014504.17	ENSMUST00000142010.2	956	6	-29	-46	2	0	multi-exon	FALSE	canonical	3	34	junction_2	757.224141189384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464199	34469652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34464313_34464802_34464879_34465958_34466116_34467345_34467418_34467509_34467622_34469151
Isoform_31802_146	chr18	+	874	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	2	0	2	0	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464199	34469652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
Isoform_31814_3559	chr18	+	2972	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	230	472	-42	0	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	3559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6207	False	NA	23	True	AATAAA	-20	NA	34758017	34765858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
Isoform_31817_161	chr18	+	3008	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	194	472	-78	0	multi-exon	TRUE	canonical	3	938	junction_13	99.0044268869321	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6171	False	NA	23	True	AATAAA	-20	NA	34757981	34765858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
Isoform_31821_57	chr18	+	2826	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	10	junction_10	266.201994226384	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6207	False	NA	21	True	AATAAA	-18	NA	34758017	34765856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
Isoform_31841_36	chr18	+	4277	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	0	-21	0	-1	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGTACGATAGTGTC	5087	False	NA	25	True	AATAAA	-32	NA	34892608	34906812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
Isoform_31843_5	chr18	+	4215	4	NIC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	12.657891697365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCTTGTGTACGATAG	5087	False	NA	21	True	AATAAA	-28	NA	34892608	34906808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_34892651_34895547_34895778_34901220_34902006_34903650
Isoform_31846_23	chr18	+	2074	7	FSM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	-44	2	-25	-2	multi-exon	FALSE	canonical	3	241	junction_6	14.229273425661	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTAAGTCGTATTTTT	NA	False	NA	25	True	AATAAA	-34	NA	34910074	34937684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
Isoform_31847_3	chr18	+	2454	7	FSM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	4	-426	4	426	multi-exon	FALSE	canonical	3	241	junction_6	14.229273425661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAGAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34910122	34938112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
Isoform_31849_12	chr18	+	2201	8	ISM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-53	29739	-53	4288	5prime_fragment	FALSE	canonical	3	208	junction_7	25.431781498827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGCCCCTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	34910046	34941974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293
Isoform_31850_5	chr18	+	6722	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-26	-333	-26	333	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTTTGGAGTAGACAA	NA	False	NA	148	True	ATTAAA	-11	NA	34910073	34972046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
Isoform_31852_5	chr18	+	1905	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	17	4	17	-4	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGTGATCTCTGCGT	NA	False	NA	12	True	AATAAA	-18	NA	34973658	34980512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
Isoform_31860_775	chr18	+	3671	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	57	5	3	-5	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251968	35387827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
Isoform_31861_131	chr18	+	3699	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	29	5	1	-5	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251940	35387827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
Isoform_31875_64	chr18	+	721	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	39	430	0	4	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686462	35690939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
Isoform_31879_3	chr18	+	2871	3	NIC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	0	2	intron_retention	FALSE	canonical	3	167	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATTTCATTGGC	NA	False	NA	NA	False	NA	NA	NA	35686464	35690937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_35686523_35687479_35689745_35690389
Isoform_31895_17	chr18	+	3808	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	26	2428	-8	-12	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAACTTA	NA	False	NA	20	True	NA	NA	NA	35695236	35724460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31897_134	chr18	+	3760	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	77	2425	16	-9	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTAGGT	NA	False	NA	23	True	NA	NA	NA	35695287	35724463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31898_33	chr18	+	3833	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	64	2365	3	51	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTCCGTTGTGGC	NA	False	NA	7	True	NA	NA	NA	35695274	35724523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31899_6	chr18	+	3884	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	10	2368	10	48	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATATTTGTCCGTTGT	NA	False	NA	4	True	NA	NA	NA	35695220	35724520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_3190_7	chr10	+	2394	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	6	2961	6	-586	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	1853	False	NA	NA	False	NA	NA	NA	79762882	79787891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
Isoform_31900_7	chr18	+	3948	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	67	2247	6	169	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGACTTCTTGTTCTTGTT	NA	False	NA	8	True	ACTAAA	-19	NA	35695277	35724641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31904_36	chr18	+	2671	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	12	-829	12	-9	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTAGGT	NA	False	NA	23	True	NA	NA	NA	35695283	35724463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31905_8	chr18	+	2735	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	8	-889	8	51	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTCCGTTGTGGC	NA	False	NA	7	True	NA	NA	NA	35695279	35724523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_31906_6	chr18	+	2095	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-17	-224	-9	67	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTACTTTTCAT	NA	False	NA	8	True	AATAAA	-16	NA	35695254	35723858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
Isoform_3191_3	chr10	+	2227	9	FSM	ENSMUSG00000019564.13	ENSMUST00000105376.2	4892	9	19	2646	19	-586	multi-exon	FALSE	canonical	3	17	junction_1	10.5089247784919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	2164	False	NA	NA	False	NA	NA	NA	79763193	79787891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79763235_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
Isoform_31916_728	chr18	+	1449	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	2	0	1	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGTGCTTGTGTTATT	4664	False	NA	20	True	AATAAA	-14	NA	35731693	35750237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
Isoform_3192_95	chr10	+	2951	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	957	0	-957	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTTGCTGGCTTTTT	2289	False	NA	3	True	ATTAAA	-17	NA	79795988	79805080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
Isoform_31924_55	chr18	+	1908	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-162	734	-162	614	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTGTGAATAGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	35904448	35939487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_31927_66	chr18	+	2452	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	22	6	-7	1	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTCACCTGTCTCAT	NA	False	NA	11	True	AATAAA	-22	NA	35904632	35940215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_31928_22	chr18	+	2637	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-163	6	-163	1	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTCACCTGTCTCAT	NA	False	NA	11	True	AATAAA	-22	NA	35904447	35940215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_31929_106	chr18	+	1726	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	22	732	-7	616	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTGAATAGGCTTT	NA	False	NA	NA	False	AATAAA	-26	NA	35904632	35939489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
Isoform_3193_1630	chr10	+	1395	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	2513	0	79	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGCGCCTTGGTTGTT	2289	False	NA	29	True	ACTAAA	-17	NA	79795988	79803524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
Isoform_31954_12	chr18	+	3750	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-107	-2474	-2	0	multi-exon	FALSE	canonical	3	389	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962838	35994741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35963293_35991445
Isoform_31955_12	chr18	+	3782	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-140	-2473	-35	-1	multi-exon	FALSE	canonical	3	389	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35962805	35994740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_35963293_35991445
Isoform_31958_106	chr18	+	2593	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-33	5	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35962807	35994746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_35963293_35991445_35992510_35993702
Isoform_31970_27	chr18	+	2188	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35963366	35994740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_35963453_35991445_35992510_35993702
Isoform_31973_8	chr18	+	940	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	36	125	-2	-3	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTGTGTGACTTA	NA	False	NA	9	True	AATAAA	-9	NA	36481747	36536025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
Isoform_31975_129	chr18	+	817	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	13	1	13	-1	multi-exon	FALSE	canonical	3	759	junction_1	90	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	16	True	AATAAA	-16	NA	36481762	36536032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36481870_36499567_36499795_36535549
Isoform_31976_45	chr18	+	840	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	-17	8	-17	-3	multi-exon	FALSE	canonical	3	759	junction_1	90	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTGTGTGACTTA	NA	False	NA	9	True	AATAAA	-9	NA	36481732	36536025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36481870_36499567_36499795_36535549
Isoform_31978_3	chr18	+	1783	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	444	8	444	-8	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTCTTGGCTCCAT	NA	False	NA	25	True	AGTAAA	-7	NA	36781356	36798962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
Isoform_31979_24	chr18	+	2552	3	FSM	ENSMUSG00000033272.13	ENSMUST00000170288.2	403	3	9	-2158	0	-1	multi-exon	FALSE	canonical	3	17	junction_1	222	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812644	36816913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36812677_36813480_36813668_36814580
Isoform_31982_290	chr18	+	2473	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-9	-2	0	-1	multi-exon	FALSE	canonical	3	269	junction_1	96	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812635	36816913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36812677_36813568_36813668_36814580
Isoform_31984_107	chr18	+	2365	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	6	-9	2	1	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCCTGTCTTCTGTG	NA	False	NA	20	True	AATAAA	-38	NA	36812637	36816915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
Isoform_31987_40	chr18	+	1746	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	74	3	0	-3	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868194	36875447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
Isoform_31988_29	chr18	+	1849	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	-29	3	0	-3	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868091	36875447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
Isoform_31994_225	chr18	+	1919	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	73	4	7	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877781	36890688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
Isoform_31997_34	chr18	+	1585	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	32	2	32	-2	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGTGCCAAGCTGG	NA	False	NA	2	True	AATAAA	-17	NA	36893304	36896861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
Isoform_31998_3	chr18	+	1333	7	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	19	-277	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	120.314402943104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTATATTCTGTGTCAT	NA	False	NA	23	True	NA	NA	NA	36893291	36896586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895821_36895901_36896072_36896144
Isoform_32_159	ERCC-00022	+	732	1	FSM	ERCC-00022A	DQ855004	735	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	2	734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00022_+_0_700
Isoform_32001_86	chr18	+	2403	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	244	689	-17	179	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916304	36924926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_32003_3	chr18	+	3088	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	230	18	7	-18	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	36916290	36925597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_32004_7	chr18	+	2161	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	20	-179	-18	179	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916303	36924926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
Isoform_32005_5	chr18	+	2671	12	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-18	175	intron_retention	FALSE	canonical	3	88	junction_9	17.4327515454756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGGACCTGAGTTCAT	NA	False	NA	9	True	NA	NA	NA	36916303	36924922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
Isoform_32007_14	chr18	+	2276	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	33	1	33	-1	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGACTTTTCTTTGA	6649	False	NA	21	True	AATAAA	-21	NA	36926961	36932718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
Isoform_32008_64	chr18	+	1266	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	52	992	52	591	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGTTTCTTCTGTTTCA	6668	False	NA	30	True	ATTAAA	-27	NA	36926980	36931727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
Isoform_32009_81	chr18	+	874	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	52	1384	52	199	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTCCCCATATCCC	6668	False	NA	29	True	AATAAA	-20	NA	36926980	36931335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
Isoform_32011_3	chr18	+	4730	4	FSM	ENSMUSG00000102742.2	ENSMUST00000061279.10	4756	4	24	2	24	-2	multi-exon	FALSE	canonical	1	6	junction_1	101.88337559299	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGACCGCGTCTGTTT	NA	False	NA	15	True	AATAAA	-18	NA	37888807	37974924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_37891421_37958073_37958133_37966317_37966407_37972955
Isoform_32012_60	chr18	+	2284	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2794	2	2601	-2	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGACCGCGTCTGTTT	NA	False	NA	15	True	AATAAA	-18	NA	37901426	37974924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
Isoform_32013_20	chr18	+	4727	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	-45	5	1	-5	multi-exon	FALSE	canonical	3	36	junction_1	87.788888185743	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGACCGCGTCTG	NA	False	NA	12	True	AATAAA	-15	NA	37939417	37974921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
Isoform_32015_8	chr18	+	2184	3	FSM	ENSMUSG00000102543.6	ENSMUST00000192875.2	5777	3	5298	-1705	5298	-4	multi-exon	FALSE	canonical	3	212	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGACCGCGTCTGT	2315	False	NA	13	True	AATAAA	-16	NA	37958004	37974922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_37958133_37966317_37966407_37972955
Isoform_32019_1023	chr18	+	2390	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	1	3	1	-3	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	1023	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3968	False	NA	17	True	AATAAA	-18	NA	38383312	38395679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
Isoform_32026_7	chr18	+	3051	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	96.6517229828602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	954	False	NA	17	True	AATAAA	-22	NA	38429715	38450896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32027_30	chr18	+	3151	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	972	False	NA	17	True	AATAAA	-22	NA	38429733	38450896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32028_21	chr18	+	3008	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	972	False	NA	26	True	AATAAA	-31	NA	38429733	38450905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32029_5	chr18	+	3076	10	FSM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	-6	-660	2	-1	multi-exon	FALSE	canonical	2	2	junction_2	94.0070919310524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGACACGGTGTCCTG	963	False	NA	20	True	AATAAA	-25	NA	38429724	38450899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38429852_38430552_38430629_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_3203_44	chr10	+	1786	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	11	663	11	-663	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGAGTTTGGCCGTGA	1780	False	NA	16	True	AGTAAA	-5	NA	79824428	79831233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
Isoform_32032_6	chr18	+	1653	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	-6	-1029	0	1	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	985	False	NA	17	True	AATAAA	-22	NA	38429746	38450896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
Isoform_32033_128	chr18	+	2979	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	55	6	1	1	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	981	False	NA	17	True	AATAAA	-22	NA	38429742	38450896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32036_127	chr18	+	2836	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-4	-10	1	3	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	981	False	NA	26	True	AATAAA	-31	NA	38429742	38450905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32038_6	chr18	+	2823	8	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	91.929209676994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	964	False	NA	17	True	AATAAA	-22	NA	38429725	38450896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_38429852_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32039_30	chr18	+	2514	6	NIC	ENSMUSG00000060450.15	novel	2822	8	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	90.4486594704421	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGACACGGTGTCCTGTT	964	False	NA	22	True	AATAAA	-27	NA	38429725	38450901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_38429852_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
Isoform_32040_11	chr18	+	1759	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	26	11	-9	-11	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACTGTAGATTAGTGT	9093	False	NA	33	True	AATAAA	-18	NA	38551985	38598239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
Isoform_32041_57	chr18	+	1665	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	129	2	52	-2	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTAGTGTTTCATTTGG	9196	False	NA	42	True	AATAAA	-27	NA	38552088	38598248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
Isoform_32047_14	chr18	+	2746	21	NIC	ENSMUSG00000036452.19	novel	6415	22	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGACTTTGAGCGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	39126126	39440426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
Isoform_32052_10	chr18	+	2657	16	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	34	14193	34	-14193	5prime_fragment	FALSE	canonical	3	82	junction_6	14.1185457230316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCAAGGAATCCTTTGC	NA	False	NA	NA	False	AAAAAG	-40	NA	42408470	42460303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228
Isoform_32054_8	chr18	+	3723	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-19	2597	0	-2597	multi-exon	TRUE	canonical	3	82	junction_6	14.1470845052965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTTAACTCTTAGCT	NA	False	NA	22	True	ATTAAA	-16	NA	42408417	42471899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_32055_5	chr18	+	4071	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	5	2225	5	-2225	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTTTTGCTCATTCCC	NA	False	NA	NA	False	AATAAA	-15	NA	42408441	42472271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
Isoform_32056_12	chr18	+	2312	4	ISM	ENSMUSG00000024498.17	ENSMUST00000236088.2	2365	16	8	38448	6	-10543	5prime_fragment	FALSE	canonical	3	655	junction_3	28.6006992921502	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGAGAAAGGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	42644571	42658811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957
Isoform_32058_62	chr18	+	1417	7	ISM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	-13	38471	9	84	5prime_fragment	FALSE	canonical	3	436	junction_6	119.940841899478	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTAGAGTTGTTTTGT	NA	False	NA	14	True	AATAGA	-42	NA	42644574	42669438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242
Isoform_3206_12	chr10	+	3900	23	FSM	ENSMUSG00000035697.15	ENSMUST00000099501.10	3948	23	46	2	-40	1	multi-exon	TRUE	canonical	1	1	junction_1	23.4611072568839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	NA	False	NA	14	True	AATAAA	-19	NA	79852532	79867304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_32066_10	chr18	+	4222	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	7	188	-5	51	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644558	42708670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_3207_116	chr10	+	3506	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-5	-2	-5	1	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	815	False	NA	14	True	AATAAA	-19	NA	79855481	79867304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
Isoform_32073_11	chr18	+	4145	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	5	-49	5	49	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644570	42708668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
Isoform_32074_16	chr18	+	397	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	1	0	1	0	multi-exon	FALSE	canonical	3	169	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCCTTTTTGTTTTTC	NA	False	NA	13	True	AATAAA	-14	NA	44513569	44529152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_44513754_44528939
Isoform_32079_3	chr18	+	2262	9	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-20	11261	5	-11261	5prime_fragment	FALSE	canonical	3	47	junction_7	35.9609162842106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAAAAGC	NA	False	NA	NA	False	AAGAAA	-36	NA	44513573	44546775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582
Isoform_32080_12	chr18	+	3146	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-24	5494	1	-5494	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	AAGAAA	-23	NA	44513569	44552542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_32081_12	chr18	+	2959	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	19	5638	19	-5638	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGAGCCATATTTATA	NA	False	NA	NA	False	AATACA	-17	NA	44513612	44552398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_32083_15	chr18	+	1622	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-23	7017	2	-7017	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGTTGCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44513570	44551019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
Isoform_32085_3	chr18	+	1443	8	ISM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	735	45342	735	-4831	5prime_fragment	FALSE	canonical	3	27	junction_3	9.19405309125948	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAAAGCAACGAGGT	NA	False	NA	NA	False	AAGAAA	-13	NA	44961547	44977442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352
Isoform_32086_13	chr18	+	2789	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-744	-320	-59	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTTGTTTGGTCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	45692476	45818949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
Isoform_32088_294	chr18	+	2831	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	30	4	9	-4	multi-exon	FALSE	canonical	3	1498	junction_1	106	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTAAATGTTTTTTTT	NA	False	NA	16	True	ATTAAA	-13	NA	46730800	46743274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_46730868_46731707_46731768_46740570
Isoform_3210_2895	chr10	+	788	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	171	0	171	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	826	False	NA	4	True	AATAAA	-14	NA	79889492	79892273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_32104_10	chr18	+	3148	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	-19	-964	-19	2	multi-exon	FALSE	canonical	3	27	junction_1	841.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTTTTTTTCTTT	NA	False	NA	22	True	ATTAAA	-19	NA	46730845	46743280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_46731224_46731707_46731768_46740570
Isoform_32107_5	chr18	+	1248	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	-4	-105	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874960	46923585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_32108_3	chr18	+	1350	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTGTCAGTGTTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	46874958	46923685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_32109_113	chr18	+	1194	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	18	308	-4	-105	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874960	46923585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_3211_66	chr10	+	882	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	77	0	77	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	732	False	NA	4	True	AATAAA	-14	NA	79889398	79892273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_32110_90	chr18	+	1294	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	18	208	-4	-5	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTGTCAGTGTTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	46874960	46923685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
Isoform_32111_4	chr18	+	1076	5	NIC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	2	-105	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	260.700019179132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTCTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	46874966	46923585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_46875149_46887437_46887530_46912254_46912327_46913727_46913836_46922963
Isoform_32112_3	chr18	+	987	4	NIC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	-3	-107	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	258.329247279513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTACCTTTCTGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	46874961	46923583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_46875149_46912254_46912327_46913727_46913836_46922963
Isoform_32113_71	chr18	+	2246	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	3	8	3	2	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGGTTTTCAGGGTTT	NA	False	NA	18	True	AATAAA	-14	NA	47054884	47067291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
Isoform_32115_3	chr18	+	2147	4	NIC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	135.151766544134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGGTTTTCAGGGTTT	NA	False	NA	18	True	AATAAA	-14	NA	47054875	47067291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_47054960_47059378_47059483_47061585_47061726_47065472
Isoform_32117_12	chr18	+	826	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	-9	-25	-2	25	multi-exon	FALSE	canonical	3	119	junction_5	518.443593846042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGACTTTTAATTCTAAA	NA	False	NA	14	True	AATAAA	-21	NA	47091918	47168899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
Isoform_32118_848	chr18	+	1557	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	51	2	2	-2	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGCGTACAATGTTT	NA	False	NA	24	True	AATAAA	-25	NA	47091933	47221060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
Isoform_3212_1562	chr10	+	817	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	141	1	141	-1	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	796	False	NA	3	True	AATAAA	-13	NA	79889462	79892272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
Isoform_32121_21	chr18	+	1402	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-10	-792	0	-3	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091931	47221059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
Isoform_32122_11	chr18	+	1458	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-28	-902	-2	-5	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTCAAGCGTACAATG	NA	False	NA	21	True	AATAAA	-22	NA	47091918	47221057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
Isoform_32125_11	chr18	+	715	3	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-29	120416	-29	-88076	5prime_fragment	FALSE	canonical	3	64	junction_1	7	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGGAAAAACTTGG	NA	False	NA	NA	False	NA	NA	NA	49965707	49976905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_49966244_49973453_49973580_49976852
Isoform_32126_13	chr18	+	1743	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	35	-776	-29	-5	multi-exon	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACTCGGGATTTAGATT	NA	False	NA	6	True	AATAAA	-19	NA	50112528	50224844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_50112694_50223266
Isoform_32127_5	chr18	+	3205	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	30	-2233	30	5	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAATTGTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	50112523	50226301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_50112694_50223266
Isoform_32130_190	chr18	+	2645	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	37	2	37	-2	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTGCTCCTCTTTGC	NA	False	NA	12	True	AATAAA	-21	NA	50261304	50329334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
Isoform_32131_121	chr18	+	1998	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	0	658	0	-658	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGTGACTTATCTTT	NA	False	NA	10	True	AATAAA	-22	NA	52598764	52624345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_32133_5	chr18	+	1665	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-68	1059	-68	-1059	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATTTTAGGTTTTCTCA	NA	False	NA	NA	False	CATAAA	-16	NA	52598696	52623944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_32135_199	chr18	+	1464	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	0	1192	0	-1192	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTGCTTGTTTTTC	NA	False	NA	3	True	TTTAAA	-37	NA	52598764	52623811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
Isoform_32143_268	chr18	+	2027	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	38	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGTTAGGGATCTTTTT	NA	False	NA	36	True	AATAAA	-16	NA	53309425	53353935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
Isoform_32148_5	chr18	+	1778	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	100	99	3	-2	multi-exon	FALSE	canonical	3	19	junction_3	2.70801280154532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAACTAA	NA	False	NA	NA	False	AATAAA	-15	NA	53378833	53523893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
Isoform_32149_5	chr18	+	1946	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	-65	96	-65	1	multi-exon	TRUE	canonical	3	19	junction_3	2.70801280154532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACTAAATA	NA	False	NA	NA	False	AATAAA	-18	NA	53378668	53523896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
Isoform_32150_15	chr18	+	4259	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-10	24	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	53995183	54088644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
Isoform_32152_5	chr18	+	4351	13	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	-7	26	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTCTTTCCCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	53995186	54088646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
Isoform_32153_25	chr18	+	4228	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	-16	at_least_one_novel_splicesite	TRUE	canonical	3	113	junction_8	32.497425199977	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TTTAAA	-12	NA	53995171	54088604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
Isoform_32155_4	chr18	+	4090	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	88	22	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAACTCGCTCTTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	53995347	54088642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
Isoform_32157_4	chr18	+	1334	2	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	210	11021	210	-3609	5prime_fragment	FALSE	canonical	3	376	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56706103	56709763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_56706208_56708533
Isoform_32161_104	chr18	+	1239	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	189	514	189	9	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTGAGGTTGCTTTA	NA	False	NA	24	True	AATAAA	-25	NA	56706082	56720270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
Isoform_32162_74	chr18	+	1537	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	197	208	197	-208	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	NA	False	NA	NA	False	ATTAAA	-18	NA	56706090	56720576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
Isoform_32168_2686	chr18	+	2849	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-7	1	-7	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	2686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840877	56886495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_32169_54	chr18	+	3117	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-275	1	-275	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840609	56886495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_32170_202	chr18	+	2927	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-85	1	-85	-1	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGTTCTTTTTAACC	NA	False	NA	19	True	AATAAA	-18	NA	56840799	56886495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
Isoform_32190_7	chr18	+	5024	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	4	2	-1	1	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGTGCAATGATTTAAA	NA	False	NA	10	True	AATAAA	-20	NA	57487816	57526026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
Isoform_32198_90	chr18	+	3367	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	8	2	-6	-2	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAGGGTCCTGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	58792545	58813438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
Isoform_32203_4	chr18	+	570	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	-6	966	-6	-966	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	AATAGA	-20	NA	60659279	60660084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60659438_60659672
Isoform_32205_134	chr18	+	2205	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17	1516	0	-689	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATGCCCTGTTCTATA	NA	False	NA	12	True	ATTAAA	-15	NA	60659289	60690322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
Isoform_32206_48	chr18	+	3714	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17	7	0	-7	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTGTTTGGTTTCAC	NA	False	NA	27	True	AATAAA	-17	NA	60659289	60691831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
Isoform_32210_265	chr18	+	2090	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	33	87	1	-87	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGCTGGACTTATGTT	NA	False	NA	16	True	ATTAAA	-17	NA	60693840	60705795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_32211_22	chr18	+	2192	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	25	-7	-3	7	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTGGATTATTTTTTG	NA	False	NA	42	True	AGTAAA	-37	NA	60693832	60705889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_32213_5	chr18	+	1732	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	1	477	1	341	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTATTTGGTAT	NA	False	NA	NA	False	AAAAAG	-12	NA	60693808	60705405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
Isoform_32215_2975	chr18	+	542	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	55	0	-14	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	2975	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907722	60911618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
Isoform_32225_13	chr18	+	1202	9	NNC	ENSMUSG00000024610.16	novel	1224	8	NA	NA	0	-1	intron_retention	TRUE	non_canonical	1	5	junction_1	8.88467782195843	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCTTCTGCCTCTTC	NA	False	NA	6	True	AATAAA	-16	NA	60936919	60945723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_60936937_60936957_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
Isoform_32226_3	chr18	+	4062	17	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	20499	-4	20499	-1	3prime_fragment	FALSE	canonical	1	6	junction_3	3.98434436262731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGATTTCTCAGGGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	61198770	61218132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_61198980_61199569_61199686_61201167_61201292_61201813_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
Isoform_32227_4	chr18	+	4056	17	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	20502	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	4.09219913371771	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGATTTCTCAGGGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	61198773	61218132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
Isoform_32230_87	chr18	+	2405	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-416	-767	-1	-6	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTAAGGAAGTGAAATT	427	False	NA	21	True	ATTAAA	-14	NA	61688343	61721369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_32236_66	chr18	+	2448	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-66	-123	-1	1	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	427	False	NA	28	True	ATTAAA	-21	NA	61688343	61721376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_3225_54	chr10	+	2095	9	ISM	ENSMUSG00000003068.18	ENSMUST00000144883.8	3663	11	10	1906	10	364	5prime_fragment	FALSE	canonical	2	5	junction_8	26.3506997060799	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGGTGGATGCTTGCC	2657	False	NA	NA	False	CATAAA	-16	NA	79951646	79964397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224
Isoform_32250_761	chr18	+	2328	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-1	1756	-1	1	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	427	False	NA	28	True	ATTAAA	-21	NA	61688343	61721376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_32253_75	chr18	+	4085	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-1	-1	-1	1	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGAGGCTGGTTGTCTC	427	False	NA	14	True	AATAAA	-17	NA	61688343	61723133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_32257_56	chr18	+	2381	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-54	1756	-54	1	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTGAAATTTTTTTAA	374	False	NA	28	True	ATTAAA	-21	NA	61688290	61721376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
Isoform_32270_45	chr18	+	4121	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-40	-1758	-1	1	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGAGGCTGGTTGTCTC	427	False	NA	14	True	AATAAA	-17	NA	61688343	61723133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_32271_324	chr18	+	2361	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-40	2	-1	-2	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAGTGAAATTTTTT	427	False	NA	25	True	ATTAAA	-18	NA	61688343	61721373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
Isoform_32290_5	chr18	+	595	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183083.8	483	3	69	-181	-42	1	multi-exon	FALSE	canonical	3	10	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATGACTTTCTTAATAGT	NA	False	NA	18	True	AATAAA	-18	NA	61772681	61780544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61772804_61778233_61778437_61780274
Isoform_32291_11	chr18	+	613	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-36	11	-36	-11	multi-exon	FALSE	canonical	3	52	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTACGAATGAC	NA	False	NA	6	True	AATAAA	-6	NA	61772687	61780532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61772840_61778233_61778437_61780274
Isoform_32292_4	chr18	+	689	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-114	13	-3	-13	multi-exon	FALSE	canonical	3	52	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAAATGTACGAATG	NA	False	NA	4	True	AATAAA	-4	NA	61772609	61780530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61772840_61778233_61778437_61780274
Isoform_32293_4	chr18	+	904	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGATCTCTCAGTTTGC	NA	False	NA	11	True	AATAAA	-25	NA	61859489	61868988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61860074_61868668
Isoform_32294_8	chr18	+	4576	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	-39	-1	-39	1	multi-exon	TRUE	canonical	3	14	junction_11	4.02336923485777	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACCCTTTTGTCACCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62086106	62148787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
Isoform_32295_54	chr18	+	3434	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	69	7376	-29	1339	multi-exon	FALSE	canonical	3	18	junction_2	2.8613807855649	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCACGAAATACGTCTT	NA	False	NA	7	True	AATAAA	-17	NA	63055370	63086874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
Isoform_32297_4	chr18	+	3657	13	FSM	ENSMUSG00000024581.14	ENSMUST00000150267.2	1129	13	-13	-2515	12	-3	multi-exon	FALSE	canonical	2	11	junction_10	86.248671487353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTCAGTTTTATTT	NA	False	NA	3	True	AATAAA	-15	NA	63110958	63132518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
Isoform_32298_46	chr18	+	3495	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	71	1	1	-1	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTCAGTTTTATTTGC	NA	False	NA	5	True	AATAAA	-17	NA	63110972	63132520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
Isoform_3230_1107	chr10	+	2370	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-16	212	-16	0	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTATGAGGGTGTT	2631	False	NA	20	True	AATAAA	-15	NA	79951620	79966304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_32302_3	chr18	+	1361	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	8	2198	-8	32	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTCTCTTGGGTTCTT	NA	False	NA	-95	True	AGTAAA	-21	NA	63110909	63130323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
Isoform_32303_38	chr18	+	3517	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-249	1534	4	2	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATGGAATTAATCACG	NA	False	NA	NA	False	AATAAA	-24	NA	65020779	65346264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_32305_7	chr18	+	3672	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-283	1413	-30	-3	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGCATATTTTTTTT	NA	False	NA	12	True	ATTAAA	-20	NA	65020745	65346385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_32306_19	chr18	+	3637	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-248	1413	5	-3	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGCATATTTTTTTT	NA	False	NA	12	True	ATTAAA	-20	NA	65020780	65346385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_32307_9	chr18	+	3550	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-289	1541	-36	1	multi-exon	TRUE	canonical	3	102	junction_13	18.1799042339286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAATGAATGGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	65020739	65346257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
Isoform_32308_3	chr18	+	2293	9	ISM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	24	23060	0	-1	5prime_fragment	FALSE	canonical	3	18	junction_3	5.09288719686584	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	65564032	65587816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745
Isoform_32309_3	chr18	+	2946	5	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-18	19033	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	19.5624001594896	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTCACCCCATGGCT	NA	False	NA	NA	False	NA	NA	NA	65715341	65777438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65771820_65772003_65777263
Isoform_3231_606	chr10	+	2576	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-8	-2	-8	2	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGGCTGTTCTGTCCG	2639	False	NA	22	True	AATAAA	-26	NA	79951628	79966518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_32310_68	chr18	+	796	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	38	26	-2	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGCTTCCTTTTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	65933623	65950729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
Isoform_32311_7	chr18	+	2815	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	4	10	-1	-1	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGATGGCTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	65933624	65950726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
Isoform_32312_5	chr18	+	2478	3	FSM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	2	-1468	2	-12	multi-exon	FALSE	canonical	2	7	junction_1	46	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGCCACTGGTCTT	NA	False	NA	10	True	AATAAA	-22	NA	66591665	66598619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_66591709_66593913_66594070_66596340
Isoform_32313_86	chr18	+	2656	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	62	9	2	-9	multi-exon	FALSE	canonical	3	99	junction_2	7	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCACTGGTCTTTCT	NA	False	NA	13	True	AATAAA	-25	NA	66591665	66598622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_66591884_66593913_66594070_66596340
Isoform_32317_9	chr18	+	3901	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	2	1151	2	-1151	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCAAGCGATTTGTT	NA	False	NA	31	True	NA	NA	NA	67422257	67454391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32318_404	chr18	+	1358	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3632	-2	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422319	67451910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32319_36	chr18	+	1655	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	25	3374	25	2189	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGAAGCCCACGTGTA	NA	False	NA	12	True	ATTAAA	-19	NA	67422280	67452168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32320_222	chr18	+	1397	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	25	3632	25	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422280	67451910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32321_13	chr18	+	3834	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	62	1158	-4	-1158	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGAAAACATTCAAGCG	NA	False	NA	24	True	NA	NA	NA	67422317	67454384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32322_40	chr18	+	1729	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3261	-2	2302	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTAAACAGTGGAATT	NA	False	NA	23	True	CATAAA	-18	NA	67422319	67452281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32323_28	chr18	+	1767	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	25	3262	25	2301	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTTAAACAGTGGAAT	NA	False	NA	22	True	CATAAA	-17	NA	67422280	67452280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32324_48	chr18	+	1617	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	64	3373	-2	2190	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGAAGCCCACGTGTAC	NA	False	NA	13	True	ATTAAA	-20	NA	67422319	67452169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
Isoform_32326_9	chr18	+	2546	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	27	1929	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGGGTCTTCCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	67422282	67451908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
Isoform_32330_60	chr18	+	933	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	189	-7	189	7	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGGTTTGTCTCTCTG	6397	False	NA	35	True	AATAAA	-33	NA	67476862	67500862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
Isoform_32331_939	chr18	+	1758	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523786	67535819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
Isoform_32332_20	chr18	+	1801	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-46	3	-46	-3	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCATCGGTCTCTTGAAC	NA	False	NA	9	True	AATAAA	-11	NA	67523740	67535816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
Isoform_32335_4	chr18	+	2102	8	NNC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	-3	744	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	4.33777898591114	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	67597957	67613649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137_67613475_67613498
Isoform_32337_3	chr18	+	777	3	FSM	ENSMUSG00000024537.6	ENSMUST00000236522.2	795	3	-7	25	0	-25	multi-exon	FALSE	canonical	3	436	junction_2	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67774670	67779532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67774806_67777378_67777551_67779062
Isoform_32339_170	chr18	+	1058	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	2	-1	0	1	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTTTTATCTGGAAAGT	NA	False	NA	27	True	AATAAA	-33	NA	67774670	67787233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
Isoform_32342_3	chr18	+	1000	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-2	7	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	169.713169789501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTGGAAAGTATCTCT	NA	False	NA	33	True	AATAAA	-39	NA	67774675	67787239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_67774806_67777378_67777551_67781197_67781317_67781842_67782017_67786222_67786344_67786955
Isoform_32344_10	chr18	+	1672	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	21	-9	21	9	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAGTGTGTGAAATG	NA	False	NA	NA	False	AATAAA	-20	NA	67908065	67925672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
Isoform_32345_81	chr18	+	3421	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	120	1	21	-1	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTTGTCTTATAAAAAA	NA	False	NA	18	True	AATAAA	-20	NA	67908065	67928556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
Isoform_32347_43	chr18	+	3380	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	27	135	27	-135	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATAAGGATATTTTTGT	NA	False	NA	11	True	AATAAA	-24	NA	67907972	67928422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
Isoform_32350_200	chr18	+	1552	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	100	1890	1	1004	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTTGAGTGGTAA	NA	False	NA	5	True	AATAAA	-11	NA	67908045	67926667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
Isoform_32353_13	chr18	+	1423	4	FSM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	-3	5	3	-5	multi-exon	FALSE	canonical	3	112	junction_2	11.1455023315337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	110	False	NA	NA	False	NA	NA	NA	67933179	67938442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435
Isoform_32355_30	chr18	+	2461	17	ISM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	0	50518	0	4359	5prime_fragment	FALSE	canonical	3	91	junction_4	13.350444749146	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGGGAAGAAGCAAG	107	False	NA	NA	False	NA	NA	NA	67933176	67967723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566
Isoform_32356_3	chr18	+	2317	16	NIC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	0	4350	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	30.5698471627772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCACTCAGAAATAAGGGA	113	False	NA	NA	False	NA	NA	NA	67933182	67967714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_67933257_67933724_67933896_67936058_67936227_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566
Isoform_32357_9	chr18	+	2079	12	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	414.246084087488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGCAATTCTGAGAC	NA	False	NA	85	True	AATAAA	-15	NA	68433470	68454975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_68433497_68436502_68436567_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
Isoform_32361_6	chr18	+	2468	7	FSM	ENSMUSG00000009535.14	ENSMUST00000151833.2	2474	7	7	-1	5	1	multi-exon	FALSE	canonical	3	867	junction_3	84.7042239534461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGTGAAAG	NA	False	NA	NA	False	AATAGA	-6	NA	68433475	68448522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058
Isoform_32363_12	chr18	+	1504	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	35	4527	-2	1081	5prime_fragment	FALSE	canonical	3	765	junction_7	145.735681591328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTTTTTCTGA	NA	False	NA	6	True	ATTAAA	-7	NA	68433460	68453396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
Isoform_32365_209	chr18	+	1993	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	327.063064154123	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGCAATTCTGAGAC	NA	False	NA	85	True	AATAAA	-15	NA	68433460	68454975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454695_68454726
Isoform_32367_143	chr18	+	1988	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	327.063064154123	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433470	68454978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454691_68454720
Isoform_32372_24	chr18	+	1817	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	430.6471989924	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433474	68454978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454695_68454726
Isoform_32375_25	chr18	+	1962	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	782	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	341.590397991513	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	False	NA	87	True	AATAAA	-17	NA	68438849	68454977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454689_68454718
Isoform_32376_3	chr18	+	3121	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.7490816425648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAACAGAAAAACAAA	1568	False	NA	82	True	NA	NA	NA	69477167	69816314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32377_3	chr18	+	2348	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114982.8	3694	20	66	1280	14	1	multi-exon	FALSE	canonical	2	4	junction_1	28.7490816425648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3258	False	NA	85	True	NA	NA	NA	69478857	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32378_6	chr18	+	2318	20	FSM	ENSMUSG00000053477.19	ENSMUST00000078486.13	7147	20	108	4721	-22	1	multi-exon	FALSE	canonical	2	4	junction_1	28.0844590851464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3300	False	NA	85	True	NA	NA	NA	69478899	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32379_34	chr18	+	2361	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	481	144	27	1	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3671	False	NA	85	True	NA	NA	NA	69479270	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32381_3	chr18	+	2598	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	423	-35	-31	-13	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTTCTTTTGGAAAAAA	3613	False	NA	NA	False	NA	NA	NA	69479212	69816496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32383_44	chr18	+	2373	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-160	-21	27	1	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3671	False	NA	85	True	NA	NA	NA	69479270	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32384_4	chr18	+	2312	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	85	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	27.706314969636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3729	False	NA	85	True	NA	NA	NA	69479328	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32385_4	chr18	+	2445	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	27.706314969636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	3626	False	NA	115	True	NA	NA	NA	69479225	69816347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32386_4	chr18	+	2300	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	85	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	26.5128411891754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3729	False	NA	85	True	NA	NA	NA	69479328	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32387_4	chr18	+	2412	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	26.5128411891754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3617	False	NA	85	True	NA	NA	NA	69479216	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32388_18	chr18	+	2376	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	25.7485174249798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3665	False	NA	85	True	NA	NA	NA	69479264	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32389_6	chr18	+	2430	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	25.7485174249798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	3611	False	NA	85	True	NA	NA	NA	69479210	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32391_6	chr18	+	1813	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	425	199	0	1	multi-exon	FALSE	canonical	3	8	junction_1	33.3437483729043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69726483	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32394_12	chr18	+	721	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65494	-48	-1761	1	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69811008	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32395_8	chr18	+	741	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84942	199	-1769	1	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	NA	False	NA	85	True	NA	NA	NA	69811000	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32396_3	chr18	+	1524	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	96	-2	-8	2	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCATGTCCTTCCATG	NA	False	NA	5	True	AATAAA	-16	NA	70058632	70102557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_32397_3	chr18	+	1532	11	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	9.48946784598589	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATGTCCTTCCATGTG	NA	False	NA	7	True	AATAAA	-18	NA	70058622	70102559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
Isoform_32398_377	chr18	+	2530	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	89	1	89	-1	multi-exon	FALSE	canonical	3	205	junction_6	27.3663729300567	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349290	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32399_32	chr18	+	2648	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	-29	1	-22	-1	multi-exon	TRUE	canonical	3	205	junction_6	27.3663729300567	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349172	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32400_58	chr18	+	2619	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	1	0	-1	multi-exon	FALSE	canonical	3	205	junction_6	27.3663729300567	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349201	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32402_12	chr18	+	2641	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349191	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32403_60	chr18	+	2534	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	97	-1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349298	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32407_6	chr18	+	2792	14	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	-1	intron_retention	FALSE	canonical	3	205	junction_5	26.6902016460222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCTCTCAATAG	NA	False	NA	13	True	AATAAA	-16	NA	74349299	74354563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
Isoform_32409_13	chr18	+	4696	16	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	19.7033556081755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401254	74414307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
Isoform_32410_20	chr18	+	2962	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-123	-1	-7	1	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401238	74415757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_32411_12	chr18	+	2826	17	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	24	junction_12	22.8219158650189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401350	74415757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_32412_3	chr18	+	2378	17	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	13	-30	at_least_one_novel_splicesite	FALSE	non_canonical	2	24	junction_12	22.8219158650189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGTCAGTGACTGGC	NA	False	NA	NA	False	AAGAAA	-37	NA	74401258	74415217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_32413_18	chr18	+	4422	16	NNC	ENSMUSG00000024561.12	novel	2908	16	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_11	20.3550703484141	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401336	74414307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
Isoform_32414_19	chr18	+	4518	15	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	19	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	18.2702222320409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401264	74414307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
Isoform_32415_25	chr18	+	2735	16	NNC	ENSMUSG00000024561.12	novel	2908	16	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_11	22.2494943762774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401273	74415757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406646_74406669_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_32416_9	chr18	+	2679	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	106	48	-9	-1	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401351	74415755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
Isoform_32418_47	chr18	+	1712	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-196	0	-196	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912071	74939279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_32419_192	chr18	+	1501	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	15	0	15	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912282	74939279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_32422_7	chr18	+	1804	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-288	0	-288	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74911979	74939279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_32423_6	chr18	+	2060	9	NIC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	191	junction_7	16.7779617355625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912280	74939279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74932246_74934367_74934439_74937071_74937227_74938925
Isoform_32426_441	chr18	+	658	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	8	109	8	-108	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTTCTGGTGGTCTTT	NA	False	NA	31	True	AATAAA	-31	NA	75133555	75136343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_32427_32	chr18	+	731	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	45	-1	45	1	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGACTGTCTAGTAGCT	NA	False	NA	22	True	ATTAAA	-38	NA	75133592	75136453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_3243_25	chr10	+	2226	9	NIC	ENSMUSG00000003068.18	novel	2566	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	28.8952850825182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTATGAGGGTGTT	2642	False	NA	20	True	AATAAA	-15	NA	79951631	79966304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_79952742_79960635_79960720_79961312_79961403_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
Isoform_32430_37	chr18	+	888	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	-23	-341	-22	1	multi-exon	FALSE	canonical	3	91	junction_1	354	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138916	75143005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75138972_75141721_75141898_75142348
Isoform_32431_33	chr18	+	940	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	40	-1	8	1	multi-exon	FALSE	canonical	3	169	junction_1	315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138978	75143005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75139086_75141721_75141898_75142348
Isoform_32432_84	chr18	+	1073	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-26	219	5	0	multi-exon	FALSE	canonical	3	388	junction_1	205.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138944	75143004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75139186_75141721_75141898_75142348
Isoform_32435_414	chr18	+	2477	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-21	0	-17	0	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151834	75420035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_32438_9	chr18	+	2315	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	49.9165525875157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151813	75420035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75376355_75376470_75419690
Isoform_32439_12	chr18	+	2232	15	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-40	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	54.3467701760779	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGACTTATTTTTAAA	NA	False	NA	19	True	AATAAA	-19	NA	75151811	75420036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_32440_13	chr18	+	2405	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	51.8457541388128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGACTTATTTTTAAA	NA	False	NA	19	True	AATAAA	-19	NA	75151834	75420036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
Isoform_32442_14	chr18	+	4436	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-165	7	-165	-7	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATCCCTTGTTGTTC	NA	False	NA	12	True	ATTAAA	-17	NA	75500434	75528999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
Isoform_32449_13	chr18	+	2141	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	-11	17	-11	-17	multi-exon	FALSE	canonical	0	0	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACAAAGGGAAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	76192517	76279497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76192689_76269897_76271122_76278751
Isoform_32450_19	chr18	+	2170	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	106	5813	-15	-144	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTTATTTTTGTGT	NA	False	NA	17	True	TATAAA	-28	NA	76374756	76438221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32451_18	chr18	+	2342	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	90	5657	-31	12	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCCTTGACCTTCATG	NA	False	NA	21	True	AATAAA	-34	NA	76374740	76438377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32452_61	chr18	+	2069	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	343	5677	-123	-8	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGTGGATTAACTT	NA	False	NA	1	True	AATAAA	-14	NA	76374993	76438357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32453_24	chr18	+	2536	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	317	5236	-149	433	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGCCTCATTT	NA	False	NA	15	True	AATAAA	-20	NA	76374967	76438798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32454_36	chr18	+	1957	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	319	5813	-147	-144	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTTATTTTTGTGT	NA	False	NA	17	True	TATAAA	-28	NA	76374969	76438221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32455_6	chr18	+	2741	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	116	5232	-5	437	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGCCTCATTTTACT	NA	False	NA	19	True	AATAAA	-24	NA	76374766	76438802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32457_4	chr18	+	2016	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	187	-558	-158	-6	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGTGGATTAACTTGG	NA	False	NA	3	True	AATAAA	-16	NA	76374958	76438359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32459_5	chr18	+	2097	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-24	-6	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGTGGATTAACTTGG	NA	False	NA	3	True	AATAAA	-16	NA	76375220	76438359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
Isoform_32461_82	chr18	+	494	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	22	886	-6	37	multi-exon	FALSE	canonical	3	1641	junction_2	78	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTTTTTTTTTTTTT	NA	False	NA	21	True	AATAAA	-18	NA	77017734	77028422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77017913_77027263_77027366_77028208
Isoform_32462_34	chr18	+	1387	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	16	-1	-12	1	multi-exon	FALSE	canonical	3	1641	junction_2	78	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTCTGATTTATGCCTTT	NA	False	NA	16	True	AATAAA	-18	NA	77017728	77029309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77017913_77027263_77027366_77028208
Isoform_32464_237	chr18	+	1535	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	36	3906	1	-4	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTTTTAATTAGACAT	NA	False	NA	15	True	NA	NA	NA	77031823	77059097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_32465_5	chr18	+	4009	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	21	1447	-14	958	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATCTATTTGACCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	77031808	77061556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_32469_5	chr18	+	1588	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	-19	1500	-19	-3	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTTTAATTAGACATT	NA	False	NA	16	True	NA	NA	NA	77032113	77059098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_32470_7	chr18	+	1581	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	44	1501	-9	-4	multi-exon	FALSE	canonical	0	0	junction_2	156.505235979148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTTTTAATTAGACAT	NA	False	NA	15	True	NA	NA	NA	77032123	77059097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
Isoform_32471_36	chr18	+	1933	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	11	-127	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTGATTCTTTCAA	7910	False	NA	16	True	AATAAA	-26	NA	77152914	77234506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_32472_9	chr18	+	2061	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATGTAGCATTTATGC	7908	False	NA	18	True	ATTAAA	-30	NA	77152912	77234632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_32480_8	chr18	+	2439	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	36	585	-1	98	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTTTCTATGGAGAT	7935	False	NA	111	True	AATAGA	-20	NA	77152939	77240911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32484_196	chr18	+	2200	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	269	2	6	1	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTTGGTTGATGAG	NA	False	NA	18	True	ATTAAA	-20	NA	77861697	77870567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
Isoform_3249_219	chr10	+	955	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	-30	6	-30	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4415	False	NA	14	True	ATTAAA	-13	NA	79978118	79981646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
Isoform_32491_3	chr18	+	3000	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	9	875	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGTATTCTTG	2219	False	NA	NA	False	AATAAA	-17	NA	77877622	77971454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
Isoform_32496_12	chr18	+	3148	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	1	-2	1	2	multi-exon	FALSE	canonical	3	46	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGTGTGTTATTGATA	NA	False	NA	22	True	AATAAA	-16	NA	80090105	80162856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80090358_80123039_80123263_80160183
Isoform_3250_2823	chr10	+	891	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	34	6	-21	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4479	False	NA	14	True	ATTAAA	-13	NA	79978182	79981646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
Isoform_32500_45	chr18	+	2904	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	9	-1945	-7	-11	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250053	80255927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250117_80250368_80250559_80253276
Isoform_32501_45	chr18	+	2917	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	-4	-1945	-4	-11	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250040	80255927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250117_80250368_80250559_80253276
Isoform_32502_2053	chr18	+	1653	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	10	20	10	-11	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	2053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250022	80255927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
Isoform_32503_38	chr18	+	802	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	21	193	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250030	80265746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
Isoform_32506_824	chr18	+	706	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	48	3324	-20	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250057	80265746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
Isoform_32507_76	chr18	+	751	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	3	3324	3	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250012	80265746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
Isoform_32511_76	chr18	+	1611	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	28	11	0	-11	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250109	80255927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
Isoform_32515_46	chr18	+	1726	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	0	29	0	-11	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATATAAAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	80250109	80255927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
Isoform_32521_6	chr18	+	1852	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	5	7	1	-3	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACATGCTTCATGTG	NA	False	NA	-1	True	AATAAA	-32	NA	80299503	80335924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
Isoform_32522_6	chr18	+	1973	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	1	15	0	-3	multi-exon	FALSE	canonical	3	12	junction_3	14.1279864099595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACATGCTTCATGTG	NA	False	NA	-1	True	AATAAA	-32	NA	80299521	80335924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
Isoform_32523_7	chr18	+	1919	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	-11	3	0	-3	multi-exon	FALSE	canonical	3	25	junction_3	7.26291952316697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACATGCTTCATGTG	NA	False	NA	-1	True	AATAAA	-32	NA	80299521	80335924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
Isoform_32526_3	chr18	+	4783	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	-5	19	-5	-19	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTGTACTAATTGCA	NA	False	NA	16	True	ATTAAA	-16	NA	82493265	82576809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
Isoform_32529_287	chr18	+	816	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	5	12	5	-2	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATACCATATGTGTCTG	NA	False	NA	7	True	AATATA	-12	NA	84869467	84897984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
Isoform_32532_148	chr18	+	2083	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-173	0	-173	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	627	False	NA	26	True	AATAAA	-15	NA	84952733	84999598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
Isoform_32533_284	chr18	+	1667	10	FSM	ENSMUSG00000034391.13	ENSMUST00000037718.10	1437	10	-133	-97	-3	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	1043	False	NA	26	True	AATAAA	-15	NA	84953149	84999598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
Isoform_32539_6	chr18	+	4549	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	45	17	2	-17	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATCATTGCATAATTG	4787	False	NA	8	True	AATAAA	-8	NA	90528322	90561374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
Isoform_32546_156	chr18	+	2131	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-127	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	397.186734137922	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTGATTCTTTCAA	6432	False	NA	16	True	AATAAA	-26	NA	77126250	77234506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126373_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_32547_38	chr18	+	2253	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.186734137922	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAACTATGTAGCATTT	6432	False	NA	14	True	ATTAAA	-26	NA	77126250	77234628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126373_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
Isoform_32552_200	chr18	+	2601	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAACAACTTCTGTTTAA	6432	False	NA	50	True	ATTAAA	-22	NA	77126250	77240850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126373_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32553_24	chr18	+	2690	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	98	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTTTCTATGGAGAT	6432	False	NA	111	True	AATAGA	-20	NA	77126250	77240911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32555_15	chr18	+	2717	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26645	-58	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	362.40677900584	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGGTTCTACTTTTC	6440	False	NA	NA	False	AATGAA	-18	NA	77126258	77240974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126391_77126418_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32556_62	chr18	+	2971	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGACTTTTTTTTTC	6432	False	NA	66	True	NA	NA	NA	77126250	77241220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126373_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32562_10	chr18	+	5175	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26646	1907	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAGTCTGACATTGA	6439	False	NA	4	True	AATAAA	-15	NA	77126257	77243403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
Isoform_32565_9	chr18	+	422	3	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	-16612	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	15	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	21194701	21200630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_21194811_21194905_21195074_21200485
Isoform_32566_53	chr18	+	2690	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	-6	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAATTGGTGATCTT	NA	False	NA	3	True	AATAAA	-15	NA	21194701	21233250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_32567_4	chr18	+	2751	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-341	-8	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCAAATTGGTGATC	NA	False	NA	1	True	AATAAA	-13	NA	21194638	21233248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_32568_3	chr18	+	2909	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.5871934353502	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGATCTTTCTCCCT	NA	False	NA	10	True	AATAAA	-22	NA	21194701	21233257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21200688_21200901_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
Isoform_32572_16	chr18	+	887	7	NNC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	76	-108	at_least_one_novel_splicesite	FALSE	canonical	3	266	junction_1	4216.73927803094	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTTCTGGTGGTCTTT	NA	False	NA	31	True	AATAAA	-31	NA	75133623	75136343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_75133912_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
Isoform_32573_15	chr18	+	1075	2	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	9592763	9597952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_9592989_9597102
Isoform_32574_3	chr18	+	993	3	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3418	-531	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAACAATAA	NA	False	NA	NA	False	NA	NA	NA	83377127	83385739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_83377264_83381662_83381799_83385018
Isoform_32575_3	chr18	+	986	5	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3417	260	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.57071421427143	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGGTTCCTATATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	83377126	83386530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_83377264_83381662_83381799_83385018_83385238_83385879_83385988_83386144
Isoform_32576_3	chr18	+	2230	20	NNC	ENSMUSG00000053477.19	novel	1959	17	NA	NA	323	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2799081178644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	4154	False	NA	85	True	NA	NA	NA	69479753	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_69479789_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32578_3	chr18	+	2445	20	NNC	ENSMUSG00000053477.19	novel	4250	21	NA	NA	-51	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2799081178644	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	1566	False	NA	85	True	NA	NA	NA	69477165	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_69477416_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
Isoform_32579_3	chr18	+	2454	20	NNC	ENSMUSG00000053477.19	novel	4250	21	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6330301489812	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGAAAAACAAACAA	1569	False	NA	85	True	NA	NA	NA	69477168	69816317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_69477416_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
Isoform_32580_4	chr18	+	2455	5	NNC	ENSMUSG00000044646.16	novel	4572	5	NA	NA	79612	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.4790199457749	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAATGAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	76032897	76279506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_76033098_76033618_76033833_76144699_76144762_76269897_76271122_76278751
Isoform_32582_4	chr18	+	2309	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	9	-15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCTTCTGAAAGTGTG	NA	False	NA	2	True	AATAAA	-5	NA	37939425	37974911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
Isoform_32583_3	chr18	+	5109	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-6	1011	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAAAAAGCAATAAT	NA	False	NA	NA	False	AATATA	-5	NA	82935872	83020836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
Isoform_32586_3	chr18	+	789	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAACGAAAA	47	False	NA	NA	False	NA	NA	NA	3000140	3000929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_3000100_3000900
Isoform_32590_3	chr18	-	179	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAGCAACAAAA	8928	False	NA	NA	False	NA	NA	NA	74207014	74206835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_74206800_74207000
Isoform_32591_9	chr18	+	511	1	NIC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	45	-2348	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACCAAAAAAAGGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	75133592	75134103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_75133600_75134100
Isoform_32593_3	chr18	-	175	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	75225937	75225762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_75225800_75225900
Isoform_32595_6	chr18	-	188	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATGATGAAATG	NA	False	NA	NA	False	NA	NA	NA	10190631	10190443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_10190400_10190600
Isoform_32596_3	chr18	-	733	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10276043	10275310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_10275300_10276000
Isoform_32598_3	chr18	-	173	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATAAATAAAAA	6787	False	NA	NA	False	NA	NA	NA	77725944	77725771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_77725800_77725900
Isoform_32599_3	chr18	-	319	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGAGACGGCTCAGTG	NA	False	NA	NA	False	GGGGCT	-13	NA	77811476	77811157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_77811200_77811500
Isoform_3260_3	chr10	+	2834	9	NNC	ENSMUSG00000035621.14	novel	3727	9	NA	NA	0	-889	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	5.45435605731786	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTGATGGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	79984105	79993312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990167_79990307_79990967_79991241_79992198
Isoform_32601_3	chr18	-	176	1	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77845170	77844994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_77845000_77845200
Isoform_32603_69	chr18	+	800	1	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	9	-6299	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77861700	77862500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_77861700_77862500
Isoform_32607_4	chr18	-	172	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	77875399	77875227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_77875200_77875400
Isoform_32608_3	chr18	+	459	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77974575	77975034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_77974600_77975000
Isoform_32609_7	chr18	+	1427	1	FSM	ENSMUSG00000117949.2	ENSMUST00000236190.2	253	1	-912	-262	-912	262	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAGGAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	80062481	80063908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_80062500_80063900
Isoform_3261_6	chr10	+	3595	8	FSM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	0	2	0	-2	multi-exon	FALSE	canonical	3	9	junction_7	4.49943307086389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTTGCCCCTGGCTG	NA	False	NA	22	True	AATAAA	-14	NA	79984105	79994199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
Isoform_32614_4	chr18	+	203	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTCTGCATTATCT	4656	False	NA	NA	False	NA	NA	NA	80211850	80212053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_80211800_80212100
Isoform_32618_3	chr18	+	1393	1	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	17663	5	9078	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACTTCTTGGTCATGAT	3217	False	NA	2	True	NA	NA	NA	80267672	80269065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_80267700_80269100
Isoform_32619_6	chr18	-	807	1	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	0	-23783	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAGAAGAAAAAAAAATA	9772	False	NA	NA	False	AATATA	-1	NA	80977247	80976440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_80976400_80977200
Isoform_3262_3	chr10	+	3532	7	NNC	ENSMUSG00000035621.14	novel	3597	8	NA	NA	-220	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	6.23832242407097	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTGCCCCTGGCTGTT	842	False	NA	24	True	AATAAA	-16	NA	79985499	79994201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990167_79990307_79990967_79991241_79992198
Isoform_32620_4	chr18	-	1499	1	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	11	-12694	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCTTAAT	-16	True	NA	NA	False	ACTAAA	-23	NA	10610098	10608599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_10608600_10610100
Isoform_32623_6	chr18	+	500	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	1004	-149	1004	149	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	AGTAAA	-11	NA	82357590	82358090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_82357600_82358100
Isoform_32624_11	chr18	+	425	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	1079	-149	1079	149	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	AGTAAA	-11	NA	82357665	82358090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_82357700_82358100
Isoform_32627_3	chr18	+	2149	1	Antisense	novelGene_ENSMUSG00000048410.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84607664	84609813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_+_84607700_84609800
Isoform_32628_4	chr18	+	3386	1	NIC	ENSMUSG00000024646.15	novel	833	5	NA	NA	-9	-18829	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	84869492	84872878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_84869500_84872900
Isoform_3263_23	chr10	+	1471	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-47	-512	-1	-6	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATCTCGCTCTGACCA	6190	False	NA	NA	False	ATTAAA	-12	NA	80003672	80007483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
Isoform_32631_5	chr18	-	175	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTGATATCTATA	NA	False	NA	NA	False	NA	NA	NA	86003888	86003713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_86003700_86003900
Isoform_32634_4	chr18	+	831	1	NIC	ENSMUSG00000110277.3	novel	2003	4	NA	NA	-7	-8965	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90597912	90598743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_90597900_90598700
Isoform_32635_3	chr18	-	2338	1	FSM	ENSMUSG00000117634.2	ENSMUST00000235010.2	2365	1	21	6	21	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTTTTGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	11790820	11788482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_11788500_11790800
Isoform_32636_3	chr18	-	191	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTGCTAGGAACTG	NA	False	NA	NA	False	NA	NA	NA	11832428	11832237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_11832200_11832400
Isoform_32637_13	chr5	-	170	1	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACAT	4528	False	NA	NA	False	NA	NA	NA	150589986	150589816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_150589800_150590000
Isoform_32639_5	chr18	+	4192	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	3	-1509	3	1509	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTATTCTATTAGC	NA	False	NA	NA	False	NA	NA	NA	3471632	3475824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_3471600_3475800
Isoform_3264_112	chr10	+	1254	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	61	6	-1	-6	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATCTCGCTCTGACCA	6190	False	NA	NA	False	ATTAAA	-12	NA	80003672	80007483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
Isoform_32644_353	chr18	+	587	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	-10	-43	-10	43	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGGAAAAATG	NA	False	NA	NA	False	AATAAA	-40	NA	15965840	15966427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_15965800_15966400
Isoform_32648_3	chr18	+	4203	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	16983731	16987934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_16983700_16987900
Isoform_32649_9	chr18	-	177	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATTTTTTATTAC	NA	False	NA	0	True	NA	NA	NA	19051307	19051130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_19051100_19051300
Isoform_3265_3	chr10	+	1313	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	6	2	6	-2	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGCTCTGACCATTTC	6135	False	NA	NA	False	ATTAAA	-16	NA	80003617	80007487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
Isoform_32650_3	chr18	+	3360	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTCTGCTGAGTAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	20878435	20881795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_+_20878400_20881800
Isoform_32651_19	chr18	-	4053	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-313	-3121	-313	3121	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATAAATAAAAAAAAAAT	-2	True	NA	NA	False	AATATA	-35	NA	4199251	4195198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_4195200_4199300
Isoform_32652_5	chr18	-	4145	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-396	-3130	-396	3130	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGTAATT	0	True	NA	NA	False	AATATA	-44	NA	4199334	4195189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_4195200_4199300
Isoform_32658_3	chr18	+	2389	1	Genic_Genomic	ENSMUSG00000033107.7	novel	NA	NA	NA	NA	-10	-36721	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	5331	False	NA	NA	False	NA	NA	NA	21077671	21080060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_+_21077700_21080100
Isoform_32659_10	chr18	+	184	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAACTAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	24183515	24183699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_24183500_24183700
Isoform_3266_4	chr10	+	834	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	-1	1	-1	-1	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6190	False	NA	NA	False	AATAAA	-16	NA	80003672	80008619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
Isoform_32660_5	chr18	+	2680	1	Genic_Genomic	ENSMUSG00000024236.19	novel	NA	NA	NA	NA	-8	-79865	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAATCAAATTTT	-16	True	NA	NA	False	AAGAAA	-6	NA	4920531	4923211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_+_4920500_4923200
Isoform_32662_8	chr18	+	317	1	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	0	-2105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	341	False	NA	NA	False	NA	NA	NA	24603907	24604224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_24603900_24604200
Isoform_32663_5	chr18	-	184	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	24679183	24678999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_24679000_24679200
Isoform_32664_3	chr18	+	190	1	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACATTTAGAATCACATAA	NA	False	NA	NA	False	NA	NA	NA	24702286	24702476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_24702300_24702500
Isoform_32668_5	chr18	-	184	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACATGGAGAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	27809213	27809029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_27809000_27809200
Isoform_3267_6	chr10	+	2483	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	60	junction_6	113.828330783197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6190	False	NA	NA	False	AATAAA	-16	NA	80003672	80008619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80008347_80008470
Isoform_32670_5	chr18	+	177	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCACAAAC	NA	False	NA	NA	False	NA	NA	NA	31509891	31510068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_31509900_31510100
Isoform_32671_17	chr18	+	2210	1	NIC	ENSMUSG00000024400.17	novel	1756	2	NA	NA	0	-22545	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	5655	False	NA	NA	False	NA	NA	NA	31937150	31939360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_31937200_31939400
Isoform_32672_26	chr18	-	360	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATAAAAATAAAATTTTA	7699	False	NA	NA	False	NA	NA	NA	32029281	32028921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_32028900_32029300
Isoform_32673_4	chr18	-	2205	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	519	3	519	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGAGCTGGATGGTCT	NA	False	NA	NA	False	TATAAA	-15	NA	32044358	32042153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_32042200_32044400
Isoform_32674_6	chr18	-	1117	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	567	1043	567	-1043	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTGGCTTTAAAATAGT	NA	False	NA	-11	True	ATTAAA	-12	NA	32044310	32043193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_32043200_32044300
Isoform_32676_7	chr18	-	857	1	Antisense	novelGene_ENSMUSG00000024384.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTCATGATCTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	32201233	32200376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_-_32200400_32201200
Isoform_32677_12	chr18	+	662	1	FSM	ENSMUSG00000038299.17	ENSMUST00000234434.2	2666	1	-66	2070	3	-2070	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCTGGAAAT	8995	False	NA	NA	False	NA	NA	NA	32970308	32970970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_32970300_32971000
Isoform_32678_3	chr18	-	1299	1	NIC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	-18	-7874	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAAAAAAATAATAAGA	NA	False	NA	NA	False	NA	NA	NA	33346892	33345593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_33345600_33346900
Isoform_32679_3	chr18	+	2583	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-270	-2181	-270	2181	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	33927946	33930529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_33927900_33930500
Isoform_3268_3	chr10	+	763	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	159.6200349441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCGACTCTGTGGCTTG	6190	False	NA	NA	False	AATAAA	-16	NA	80003672	80008619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80008247_80008347_80008470
Isoform_32680_4	chr18	+	404	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-273	1	-273	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTACTCTAGCCTGTGT	NA	False	NA	9	True	NA	NA	NA	33927943	33928347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_33927900_33928300
Isoform_32681_4	chr18	+	648	1	NIC	ENSMUSG00000005871.16	novel	3588	14	NA	NA	1	-42123	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	34353977	34354625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_34354000_34354600
Isoform_32682_3	chr18	+	2131	1	ISM	ENSMUSG00000005871.16	ENSMUST00000115781.10	12346	16	96440	2635	16163	-2635	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATTGTTGACACTTAA	NA	False	NA	-1	True	AATAAA	-10	NA	34450476	34452607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_34450500_34452600
Isoform_32684_16	chr18	-	716	1	Genic_Genomic	ENSMUSG00000036501.8	novel	NA	NA	NA	NA	-31	-11274	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34639915	34639199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_-_34639200_34639900
Isoform_32685_27	chr18	-	2663	1	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-20	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	34757627	34754964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_34755000_34757600
Isoform_32687_3	chr18	-	3138	1	Genic_Genomic	ENSMUSG00000044201.11	novel	NA	NA	NA	NA	-15	-860	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCAAAAATAAAAACATAC	2777	False	NA	NA	False	NA	NA	NA	34884601	34881463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_-_34881500_34884600
Isoform_32688_4	chr18	+	3161	1	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	4	-19972	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATGAGGACAA	NA	False	NA	NA	False	TATAAA	-21	NA	34910122	34913283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_34910100_34913300
Isoform_3269_23	chr10	+	648	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	2	28	2	-28	multi-exon	FALSE	canonical	3	33	junction_1	13	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGAGACCTCCCCCTTG	NA	False	NA	15	True	AATAAA	-21	NA	80008779	80010952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80009009_80010042_80010160_80010650
Isoform_32697_8	chr18	+	162	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35096503	35096665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_35096500_35096700
Isoform_32698_7	chr18	-	206	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35183041	35182835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_35182800_35183000
Isoform_327_35	SIRV4001	+	3996	1	FSM	SIRV4001A	SIRV4001	3997	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	3996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4001_+_0_4000
Isoform_3270_17	chr10	+	1597	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	217	317	217	-317	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80015532	80025527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
Isoform_32704_7	chr17	+	178	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	6989	False	NA	NA	False	NA	NA	NA	6680408	6680586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_6680400_6680600
Isoform_32705_3	chr18	-	690	1	NIC	ENSMUSG00000117874.2	novel	1115	7	NA	NA	16	-14190	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	35795200	35794510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_35794500_35795200
Isoform_32706_30	chr18	-	172	1	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35897489	35897317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_35897300_35897500
Isoform_32709_7	chr2	-	177	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	157613593	157613416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_157613400_157613600
Isoform_32710_3	chr18	-	168	1	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	36382880	36382712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_36382700_36382900
Isoform_32711_9	chr18	-	178	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAACTAAGC	NA	False	NA	NA	False	NA	NA	NA	36396915	36396737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_36396700_36396900
Isoform_32713_6	chr18	+	1293	1	ISM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	5987	4159	5987	-4159	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAACAAAAAAATA	NA	False	NA	NA	False	TATAAA	-18	NA	36420136	36421429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_36420100_36421400
Isoform_32715_3	chr18	-	1072	1	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGCTCCTCACTAATTC	7282	False	NA	NA	False	AATAAA	-15	NA	36693276	36692204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_-_36692200_36693300
Isoform_32719_11	chr18	-	2148	2	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	19	-33	intron_retention	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	75	True	TATAAA	-23	NA	36877591	36875417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr18_-_36877026_36877051
Isoform_32721_3	chr18	+	1042	1	NIC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	50	-3116	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAATTAAAAAGAAAAAAAAA	6666	False	NA	NA	False	CATAAA	-26	NA	36926978	36928020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_36927000_36928000
Isoform_32722_3	chr18	-	179	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTCGAGCCCC	NA	False	NA	NA	False	NA	NA	NA	37179315	37179136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_37179100_37179300
Isoform_32724_3	chr18	+	726	1	FSM	ENSMUSG00000073590.4	ENSMUST00000097608.3	2831	1	-10	2115	-10	-2115	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	AATAGA	-43	NA	37788949	37789675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_37788900_37789700
Isoform_32725_4	chr18	+	3679	1	Genic_Genomic	ENSMUSG00000103897.2_ENSMUSG00000103585.2	novel	NA	NA	NA	NA	-28	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACGACAAAATAT	NA	False	NA	NA	False	AAGAAA	-29	NA	37858730	37862409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_+_37858700_37862400
Isoform_32726_3	chr18	-	3537	1	Genic_Genomic	ENSMUSG00000097330.3	novel	NA	NA	NA	NA	-32	-9920	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	37901327	37897790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_-_37897800_37901300
Isoform_3273_655	chr10	+	2389	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	249	2	3	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8467	False	NA	17	True	TATAAA	-15	NA	80062516	80079735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_32733_5	chr18	+	279	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	177	-45	177	45	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGTAAATAATTTAAAA	210	False	NA	NA	False	ATTAAA	-21	NA	6332808	6333087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_6332800_6333100
Isoform_32734_3	chrX	+	176	1	Intergenic	novelGene_2193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATAAGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	126443939	126444115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_126443900_126444100
Isoform_32735_3	chr18	-	1967	1	FSM	ENSMUSG00000084514.2	ENSMUST00000122565.2	83	1	-211	-1673	-211	1673	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTCTTTTTGTTTTAT	-19	True	NA	NA	False	ATTAAA	-18	NA	6490857	6488890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_6488900_6490900
Isoform_32736_6	chr18	-	191	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTACCAACATATCCT	NA	False	NA	NA	False	NA	NA	NA	42333407	42333216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_42333200_42333400
Isoform_32738_7	chr18	-	205	1	Antisense	novelGene_ENSMUSG00000024491.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCAACT	NA	False	NA	NA	False	TATAAA	-19	NA	42472232	42472027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr18_-_42472000_42472200
Isoform_32739_4	chr18	-	202	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42478974	42478772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_42478800_42479000
Isoform_32740_3	chr18	+	180	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGTTGAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	42496245	42496425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_42496200_42496400
Isoform_32741_10	chr18	-	218	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	42980878	42980660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_42980700_42980900
Isoform_32742_3	chr18	-	3014	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-38	-597	-38	597	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAATGTAGTACTACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	43610899	43607885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_43607900_43610900
Isoform_32743_49	chr18	-	2412	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-34	1	-34	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	43610895	43608483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_43608500_43610900
Isoform_32745_61	chr18	-	1802	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-31	608	-31	-608	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGTTATATCCCAA	NA	False	NA	NA	False	AATAAA	-21	NA	43610892	43609090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_43609100_43610900
Isoform_3275_45	chr10	+	2521	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	248	-129	2	129	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCATTCATTGTTCT	8466	False	NA	17	True	NA	NA	NA	80062515	80079866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_32751_18	chr18	-	193	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACGAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	44511875	44511682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_44511700_44511900
Isoform_32752_3	chr18	+	305	1	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	44137	1	44137	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGGTTTTTTTGTTC	926	False	NA	14	True	AATAAA	-19	NA	44557730	44558035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_+_44557700_44558000
Isoform_32753_3	chr18	-	2422	1	FSM	ENSMUSG00000118282.2	ENSMUST00000237083.2	1810	1	-172	-440	-172	440	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGAAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	46490206	46487784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_46487800_46490200
Isoform_32755_5	chr6	+	218	1	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATTAATGCTGTTTAA	5804	False	NA	NA	False	NA	NA	NA	113313680	113313898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_113313700_113313900
Isoform_32758_4800	chr18	+	1733	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	0	14	0	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	4800	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	48179713	48181446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_48179700_48181400
Isoform_3276_54	chr10	+	2425	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	213	2	-8	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8431	False	NA	17	True	TATAAA	-15	NA	80062480	80079735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_32770_4	chr18	+	204	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTAGCATTCTTGTTAA	NA	False	NA	NA	False	AAGAAA	-3	NA	53586156	53586360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_53586200_53586400
Isoform_32771_5	chr18	-	213	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTTCAGAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	53897546	53897333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_53897300_53897500
Isoform_32772_3	chr18	+	175	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATTGAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	55271944	55272119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_55271900_55272100
Isoform_32773_4	chr11	+	177	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9528	False	NA	NA	False	NA	NA	NA	106698199	106698376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106698200_106698400
Isoform_32774_7	chr18	+	1894	1	NIC	ENSMUSG00000024283.16	novel	2205	13	NA	NA	0	-524	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGGAAAAACTG	11	True	NA	NA	False	TATAAA	-27	NA	7869195	7871089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_7869200_7871100
Isoform_32776_9	chr18	-	196	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTTTTTTTT	3137	False	NA	-5	True	NA	NA	NA	56788357	56788161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_56788200_56788400
Isoform_32778_21	chr18	+	193	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	56807519	56807712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_56807500_56807700
Isoform_32779_6	chr18	+	1147	1	FSM	ENSMUSG00000024594.10	ENSMUST00000237031.2	1147	1	-2	2	-2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57487815	57488962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_57487800_57489000
Isoform_32780_3	chr1	+	172	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	171092301	171092473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_171092300_171092500
Isoform_32781_20	chr18	+	205	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	60612447	60612652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_60612400_60612700
Isoform_32783_3	chr18	+	797	1	NIC	ENSMUSG00000024603.9	novel	2948	14	NA	NA	2	-966	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	AATAGA	-20	NA	60659287	60660084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_60659300_60660100
Isoform_32785_10	chr18	-	2214	1	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	0	-7046	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	5824	False	NA	NA	False	NA	NA	NA	61310122	61307908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_61307900_61310100
Isoform_3279_22	chr10	+	3365	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	28	-1	3	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8467	False	NA	17	True	TATAAA	-15	NA	80062516	80079735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_32793_48	chr18	-	793	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	141	31	130	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7564	False	NA	NA	False	AATAAA	-18	NA	61392902	61392109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61392100_61392900
Isoform_32795_3	chr18	+	3510	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	-3	2467	-3	-2467	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAGTACCACCCTGTCC	-3	True	NA	NA	False	AATAAA	-18	NA	9212159	9215669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_9212200_9215700
Isoform_32799_4	chr18	+	1832	1	FSM	ENSMUSG00000098702.2	ENSMUST00000184181.2	1865	1	31	2	-12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTTGGTCAGACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	61859491	61861323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_61859500_61861300
Isoform_32800_10	chr18	-	2162	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	-19	1	-19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATTGCACCCGTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	62313049	62310887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_62310900_62313000
Isoform_32801_6	chr18	-	499	1	Genic_Genomic	ENSMUSG00000042211.8	novel	NA	NA	NA	NA	-42	-14676	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62681808	62681309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_-_62681300_62681800
Isoform_32802_3	chr18	-	517	1	ISM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	29231	1596	2903	677	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGTCTCATCCTATT	NA	False	NA	-27	True	ATTAAA	-17	NA	63796277	63795760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr18_-_63795800_63796300
Isoform_32803_27	chr18	+	204	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCACCTCCTGCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	64461415	64461619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_64461400_64461600
Isoform_32804_19	chr18	-	1890	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-325	-560	-325	560	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	64583085	64581195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64581200_64583100
Isoform_32805_67	chr18	-	1336	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-325	-6	-325	6	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAGAAGAAAAAACG	NA	False	NA	NA	False	AAGAAA	-28	NA	64583085	64581749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_64581700_64583100
Isoform_32806_14	chr4	-	194	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	51254362	51254168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_51254200_51254400
Isoform_3281_203	chr10	+	2463	14	NIC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8495	False	NA	17	True	TATAAA	-15	NA	80062544	80079735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
Isoform_32810_15	chr18	+	178	1	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTTA	2108	False	NA	NA	False	NA	NA	NA	65053128	65053306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_65053100_65053300
Isoform_32811_3	chr7	-	175	1	Intergenic	novelGene_1787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29688191	29688016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_29688000_29688200
Isoform_32814_7	chr18	-	857	1	NIC	ENSMUSG00000024518.5	novel	2323	2	NA	NA	2321	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTGCTCATCGACTACA	NA	False	NA	NA	False	ATTAAA	-21	NA	66068565	66067708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_-_66067700_66068600
Isoform_32816_7	chr12	-	175	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84451401	84451226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_84451200_84451400
Isoform_32819_53	chr18	+	2404	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	45	75	45	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAAATGTGTTCATTT	NA	False	NA	10	True	ATTAAA	-23	NA	67338481	67340885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67338500_67340900
Isoform_32820_3	chr18	+	2487	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	28	9	28	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCATGGGTTATTTC	NA	False	NA	76	True	CATAAA	-11	NA	67338464	67340951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_+_67338500_67341000
Isoform_32823_9	chr18	+	1726	1	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	1	-4060	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	67422322	67424048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_67422300_67424000
Isoform_32829_11	chr18	+	5188	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	9592764	9597952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_9592800_9598000
Isoform_32836_9	chr18	+	177	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACC	NA	False	NA	NA	False	NA	NA	NA	67738711	67738888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_67738700_67738900
Isoform_32837_3	chr18	-	1984	1	Genic_Genomic	ENSMUSG00000097835.2	novel	NA	NA	NA	NA	-378	460	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	67908305	67906321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr18_-_67906300_67908300
Isoform_32839_8	chr18	+	3122	1	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAACAGC	13	True	NA	NA	False	NA	NA	NA	9958179	9961301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr18_+_9958200_9961300
Isoform_32841_4	chr18	-	182	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGTAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	73623979	73623797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_73623800_73624000
Isoform_32842_4	chr18	-	479	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATCCTGTGCTCACTCG	2167	False	NA	NA	False	ATTAAA	-17	NA	73768341	73767862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_73767900_73768300
Isoform_32843_54	chr19	-	3634	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	85	1850	47	-2	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGCTTGTGTTGGAG	NA	False	NA	-2	True	ATTAAA	-15	NA	3332932	3310925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
Isoform_32845_28	chr19	-	3692	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	27	1850	-10	-2	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGCTTGTGTTGGAG	NA	False	NA	-2	True	ATTAAA	-15	NA	3332990	3310925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
Isoform_32850_3	chr19	-	4874	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	131.748916267338	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625722	3504931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542515_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_32851_3	chr19	-	4710	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	114.748638336148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625707	3504933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
Isoform_32852_4	chr19	-	4914	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	106.049298376747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625715	3504931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3594107_3594256_3625640
Isoform_32853_49	chr19	-	4928	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	25	-1	-2	1	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625724	3504931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_32854_16	chr19	-	4803	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625745	3504929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
Isoform_32855_11	chr19	-	4829	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	5	7	1	-2	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAACTTCCTCGTGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3625715	3504934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
Isoform_32856_7	chr19	-	4720	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	104.600590087781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625751	3504931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
Isoform_32857_51	chr19	-	5162	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-8	7	0	1	multi-exon	TRUE	canonical	2	72	junction_10	15.3130555220533	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACCTGCCATTCCTT	7819	False	NA	-7	True	TATAAA	-13	NA	3736564	3634834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
Isoform_32859_68	chr19	-	2647	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	40	1	19	-1	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957093	3946050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_32861_4	chr19	-	3084	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	39	junction_11	8.75502821418308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957055	3946050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
Isoform_32867_65	chr19	-	966	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	17	0	17	0	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962717	3958866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
Isoform_32870_789	chr19	-	756	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	24	0	-16	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962750	3958866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
Isoform_32871_178	chr19	-	785	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962779	3958866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
Isoform_32874_4	chr19	-	1860	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	60	4	-21	-4	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTACAGGTGTCTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	3979748	3963494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
Isoform_32875_12	chr19	-	1907	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1051	-48	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	2.58198889747161	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCTATCGTCGTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	3980859	3963538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
Isoform_32878_35	chr19	-	1513	10	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	443.068871273257	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6567	False	NA	0	True	AATAAA	-27	NA	4062665	4057499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061425_4062550
Isoform_32879_1269	chr19	-	1517	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	141	3	0	2	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6567	False	NA	0	True	AATAAA	-27	NA	4062665	4057499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
Isoform_32880_460	chr19	-	1576	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	82	3	-16	2	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6508	False	NA	0	True	AATAAA	-27	NA	4062724	4057499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
Isoform_3289_1058	chr10	+	750	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	9	-1	1	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9701	False	NA	24	True	AATAAA	-15	NA	80085294	80092627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_32892_906	chr19	-	760	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	60	1	0	1	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4087925	4085407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
Isoform_32893_100	chr19	-	793	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	27	1	19	1	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4087958	4085407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
Isoform_32894_35	chr19	-	755	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237893.2	806	7	52	-1	0	-1	multi-exon	FALSE	canonical	0	0	junction_6	1359.76024234667	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGGTGTCTTTGGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	4087925	4085409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087865
Isoform_32898_24	chr19	-	992	6	ISM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	30	1	-15	-1	intron_retention	FALSE	canonical	3	1402	junction_5	871.235766024329	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092233	4090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902
Isoform_32899_783	chr19	-	766	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	30	1	-15	-1	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092233	4090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
Isoform_32900_76	chr19	-	794	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	2	1	2	-1	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092261	4090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
Isoform_32901_15	chr19	-	891	8	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	1378.94109033426	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4096012	4090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092672_4095923
Isoform_32905_14	chr19	-	932	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	1174	junction_5	1038.62948157656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092233	4090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4090540_4090707_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
Isoform_32906_10	chr19	-	949	5	ISM	ENSMUSG00000058216.14	ENSMUST00000076451.7	685	6	159	-6	159	5	3prime_fragment	FALSE	canonical	3	57	junction_3	9.36416040016402	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGCTTGTCCTTAATC	9383	False	NA	NA	False	NA	NA	NA	4109136	4107471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734
Isoform_32909_117	chr19	-	1234	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	28	-1	28	1	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	3930	False	NA	-20	True	TATAAA	-18	NA	4171547	4164462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
Isoform_3291_18	chr10	+	750	8	FSM	ENSMUSG00000020153.15	ENSMUST00000157063.2	722	8	-29	1	4	0	multi-exon	FALSE	canonical	3	197	junction_2	732.821330230511	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9696	False	NA	24	True	AATAAA	-15	NA	80085289	80092627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80085326_80088230_80088268_80088912_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_32911_11	chr19	-	1960	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	8	-707	8	689	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCCCTCACTCTTCACT	3910	False	NA	NA	False	AATAAA	-18	NA	4171567	4163756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
Isoform_32913_3	chr19	-	1293	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	68	17	0	1	multi-exon	FALSE	canonical	2	3	junction_6	105.801307490346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	9684	False	NA	-20	True	TATAAA	-18	NA	4175790	4164462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
Isoform_32914_11	chr19	-	1745	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	39	2802	1	-1	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCTTTTGCCGGACT	2788	False	NA	0	True	AGTAAA	-16	NA	4213314	4206791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_32915_4	chr19	-	2009	15	FSM	ENSMUSG00000024830.18	ENSMUST00000130469.8	1979	15	-29	-1	1	1	multi-exon	FALSE	canonical	1	2	junction_9	32.5877935079116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTGGCTTTTGCCGGAC	2774	False	NA	-1	True	AGTAAA	-15	NA	4213328	4206792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_32916_4	chr19	-	1868	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2774	False	NA	-2	True	AGTAAA	-14	NA	4213328	4206793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_32917_6	chr19	-	2317	13	NIC	ENSMUSG00000024830.18	novel	2090	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	84	junction_12	10.3772587902586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2806	False	NA	-2	True	AGTAAA	-14	NA	4213296	4206793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
Isoform_32919_173	chr19	-	2079	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	1	1	1	-1	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTGTGTGTTCCCCGTGA	5999	False	NA	-1	True	AATAAA	-14	NA	4251634	4245195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_3292_17	chr10	+	666	7	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_2	752.472295540212	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9701	False	NA	24	True	AATAAA	-15	NA	80085294	80092627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80085326_80088230_80088268_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
Isoform_32922_5	chr19	-	2167	10	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	334	junction_4	41.9817714705141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGCTGTGTGTTCCCCG	5992	False	NA	-4	True	AATAAA	-11	NA	4251641	4245198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_32923_9	chr19	-	2152	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	-27	-24	2	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	6000	False	NA	0	True	AATAAA	-15	NA	4251633	4245194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
Isoform_32925_6	chr19	-	2811	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	-106	0	-106	0	multi-exon	FALSE	canonical	1	1	junction_12	2.03228381748045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGACATTTTCCATTT	2244	False	NA	-25	True	AATAAA	-14	NA	4319314	4311723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
Isoform_32926_6	chr19	-	2628	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	80	-3	0	3	multi-exon	TRUE	canonical	1	1	junction_12	2.03228381748045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATTTTCCATTTGTG	2430	False	NA	-22	True	AATAAA	-17	NA	4319128	4311720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
Isoform_32927_34	chr19	-	2099	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	40	0	40	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	900	False	NA	-5	True	AATAAA	-17	NA	4333123	4320207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
Isoform_32928_11	chr19	-	3180	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	196	0	4	0	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356054	4336029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_32929_20	chr19	-	2172	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	196	1008	4	-391	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGTTTTATTTTGTA	NA	False	NA	-2	True	NA	NA	NA	4356054	4337037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_32930_15	chr19	-	2229	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	111	1036	-81	-419	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTATTTGTTTTCC	NA	False	NA	-30	True	TATAAA	-21	NA	4356139	4337065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
Isoform_32931_12	chr19	-	3670	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-23	-113	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATGAAAGA	4148	False	NA	NA	False	NA	NA	NA	4384052	4367846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
Isoform_32933_15	chr19	-	1139	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	-3	208	-3	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9145	False	NA	-4	True	ACTAAA	-15	NA	4489463	4475694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
Isoform_32934_6	chr19	-	1909	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	281	1391	-10	418	multi-exon	FALSE	canonical	1	2	junction_3	1.55182578445717	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGCAAGGCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	4527194	4497326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
Isoform_32935_6	chr19	-	3387	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	-194	1	-29	-1	multi-exon	FALSE	canonical	3	59	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTCAGTGTTGGTTTT	NA	False	NA	-8	True	AATAAA	-10	NA	4665724	4661820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4662667_4663183
Isoform_32937_8	chr19	-	2866	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	336	-8	336	1	multi-exon	FALSE	canonical	3	59	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665194	4661811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4662667_4663183
Isoform_32938_15	chr19	-	2405	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	509	4	344	3	multi-exon	FALSE	canonical	3	22	junction_2	18.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTTGGTTTTTCGT	NA	False	NA	-4	True	AATAAA	-14	NA	4665186	4661816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_32939_9	chr19	-	2942	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-28	4	-28	3	multi-exon	FALSE	canonical	3	22	junction_2	18.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTTGGTTTTTCGT	NA	False	NA	-4	True	AATAAA	-14	NA	4665723	4661816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_32942_4	chr19	-	3183	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-269	4	-269	3	multi-exon	FALSE	canonical	3	22	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTTGGTTTTTCGT	NA	False	NA	-4	True	AATAAA	-14	NA	4665964	4661816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4662667_4663183_4664543_4664990
Isoform_32945_4	chr19	-	1407	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	1	9	junction_4	123.357618495237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675681	4672623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674180_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_32946_4	chr19	-	1446	8	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	3	51	junction_4	128.932983699728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675667	4672621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675121_4675220_4675324_4675460
Isoform_32947_3	chr19	-	1598	7	ISM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	-9	3	-9	-1	intron_retention	FALSE	canonical	3	51	junction_4	115.983715332034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675678	4672621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220
Isoform_32948_30	chr19	-	1433	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	19	3	18	-1	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675650	4672621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_3295_56	chr10	+	2048	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-57	3	1	-3	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	9	True	AATAAA	-18	NA	80100850	80124239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_32951_41	chr19	-	1432	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	91.2554163894295	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675678	4672621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220_4675324_4675460
Isoform_32952_5	chr19	-	1560	7	FSM	ENSMUSG00000024889.6	ENSMUST00000224675.3	862	7	-318	-380	3	-1	multi-exon	FALSE	canonical	3	266	junction_6	51.0315806361338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTCTTGGAACCTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	4675665	4672621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220
Isoform_32953_121	chr19	-	1421	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	3	1	3	-1	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675665	4672623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_32955_6	chr19	-	1440	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	121.7077463032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGAACCTTGGGACT	NA	False	NA	-8	True	ATTAAA	-22	NA	4675665	4672617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4673271_4673528_4673605_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
Isoform_32957_12	chr19	-	1727	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	18	865	0	-1	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGGTATGTGTGCTTT	NA	False	NA	-9	True	AATAAA	-11	NA	4843911	4835185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
Isoform_32958_4	chr19	-	1580	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	-23	-146	0	-4	multi-exon	FALSE	canonical	3	70	junction_3	11.4406682011537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTAGGGTATGTGTGC	NA	False	NA	-12	True	AATAAA	-8	NA	4843911	4835188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
Isoform_32965_4	chr19	-	1868	2	FSM	ENSMUSG00000094936.9	ENSMUST00000179820.2	2965	2	3	1094	0	-1094	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	4843908	4841189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4842849_4843699
Isoform_32967_23	chr19	-	2281	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	17.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAAAAAAAGAAC	7800	False	NA	NA	False	NA	NA	NA	4861627	4841189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4842849_4843843_4844038_4861199
Isoform_32969_1846	chr19	-	2775	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	35	355	-14	-2	multi-exon	FALSE	canonical	3	363	junction_1	19	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTTGTCATTGTCTT	7800	False	NA	-2	True	AATAAA	-25	NA	4861627	4850951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4851834_4852578_4854044_4861199
Isoform_32970_47	chr19	-	3131	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	35	-1	-14	1	multi-exon	FALSE	canonical	3	363	junction_1	19	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGATGGTTCTGGCTG	7800	False	NA	NA	False	AATAAA	-18	NA	4861627	4850595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4851834_4852578_4854044_4861199
Isoform_3298_7	chr10	+	1776	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-103	321	-13	194	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGGCTTATTTTTTAA	NA	False	NA	31	True	AATATA	-44	NA	80100804	80123921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_32980_4	chr19	-	929	8	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	206.828727330078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889293	4875393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884200_4884339_4888858_4888932_4889224
Isoform_32981_3	chr19	-	892	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236178.2	870	8	-25	3	-11	-3	multi-exon	FALSE	canonical	3	24	junction_5	202.991002112841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTGTGTCTCTGTGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	4889326	4875396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884267_4884339_4888858_4888932_4889224
Isoform_32982_259	chr19	-	1033	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	34	0	-11	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889326	4875393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_32983_5	chr19	-	1123	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	-56	0	-56	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889416	4875393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_32984_8	chr19	-	983	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	0	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889298	4875394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
Isoform_32985_3	chr19	-	623	5	NIC	ENSMUSG00000034108.7	novel	984	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	254.264011413334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889293	4875393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4888858_4888932_4889224
Isoform_32986_3	chr19	-	1073	7	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	527	junction_4	32.5729949498047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGTGTCTCTGTGTTC	NA	False	NA	-9	True	ATTAAA	-18	NA	4889298	4875395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4875693_4875797_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
Isoform_32987_10	chr19	-	2539	18	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5960	6	5960	1	3prime_fragment	FALSE	canonical	2	12	junction_7	4.36643377879897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGTTTTGTTTTT	6273	False	NA	-2	True	AATAAA	-24	NA	4921977	4911249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798
Isoform_32988_3	chr19	-	2743	19	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	5378	3	5378	-3	3prime_fragment	FALSE	canonical	2	12	junction_7	4.67723670663315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTGTTTTTGTT	5691	False	NA	1	True	AATAAA	-27	NA	4922559	4911246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266
Isoform_32989_17	chr19	-	2864	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	17	6	17	1	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGTTTTGTTTTT	330	False	NA	-2	True	AATAAA	-24	NA	4927920	4911249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
Isoform_3299_10	chr10	+	2052	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105361.10	1537	12	-2	-513	-2	-2	multi-exon	FALSE	canonical	3	55	junction_11	285.507146282737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80100847	80124240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
Isoform_32991_3	chr19	-	5575	18	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.83570915636814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTATTTTGTGTGT	5078	False	NA	NA	False	ATTAAA	-17	NA	4956651	4936906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_4938514_4938534_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
Isoform_32992_4	chr19	-	3322	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	1	2279	0	1326	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGAGCCCTTGTCAC	5074	False	NA	NA	False	AGTAAA	-17	NA	4956655	4939184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
Isoform_32994_20	chr19	-	2640	18	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	191.571230439698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978002	4957258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4977975
Isoform_32996_1072	chr19	-	2645	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	37	1	-3	-1	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	4978278	4957257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
Isoform_330_489	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4002_+_0_4000
Isoform_33001_13	chr19	-	2608	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	-3	1401	-3	-1401	multi-exon	FALSE	canonical	2	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTCACACGTGTGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	5135562	5130758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5133130_5135325
Isoform_33002_3	chr19	-	1320	6	FSM	ENSMUSG00000024873.8	ENSMUST00000025805.8	1343	6	13	10	13	-10	multi-exon	FALSE	canonical	3	9	junction_5	5.2687759489278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACACAAGCCCCAATTC	NA	False	NA	-10	True	AATAAA	-8	NA	5148536	5142905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5143526_5143699_5143844_5143947_5144061_5144311_5144360_5144759_5144829_5148210
Isoform_33003_494	chr19	-	1858	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	54	1	-13	-1	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGTGGTGACTGAGTGTG	1555	False	NA	-1	True	AATAAA	-42	NA	5157046	5149233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
Isoform_33006_81	chr19	-	2904	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	264	1	1	-1	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168324	5157774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
Isoform_33008_123	chr19	-	2941	16	NIC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168324	5157774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
Isoform_3301_285	chr10	+	2047	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	33	1	1	-1	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGTGCTGTCTGCTTG	NA	False	NA	11	True	AATAAA	-20	NA	80100850	80124241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_33010_3	chr19	-	2667	15	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	25.1344344658552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168326	5157774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5168149
Isoform_33011_3	chr19	-	2975	16	NNC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	25.4877748473002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCTTGTTTTGAGGAG	NA	False	NA	-2	True	AATAAA	-17	NA	5168307	5157774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160496_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
Isoform_33012_33	chr19	-	4345	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	-5	529	-5	-529	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTTGGGCTCCTGCCC	NA	False	NA	-5	True	AATAAA	-18	NA	5323152	5183714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
Isoform_33013_5	chr19	-	4225	25	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-4	-532	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	17.6493625947228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGCCTTGGGCTCCTG	NA	False	NA	-8	True	AATAAA	-15	NA	5323151	5183717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566_5322836_5322951
Isoform_33019_82	chr19	-	3174	21	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	100	junction_16	496.484226839081	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3910	False	NA	-26	True	AATAAA	-17	NA	5345439	5323960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_3302_130	chr10	+	2074	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	6	1	6	-1	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGTGCTGTCTGCTTG	NA	False	NA	11	True	AATAAA	-20	NA	80100823	80124241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
Isoform_33021_1136	chr19	-	3177	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	45	0	-2	0	multi-exon	TRUE	canonical	3	1448	junction_15	340.757138589935	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3911	False	NA	-25	True	AATAAA	-18	NA	5345438	5323959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_33047_35	chr19	-	987	8	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	-19	13611	-19	-270	5prime_fragment	FALSE	canonical	3	1448	junction_2	177.082593435829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGTTGGTGATGAA	3847	False	NA	NA	False	NA	NA	NA	5345502	5337570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
Isoform_33049_4	chr19	-	503	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-101	3	-101	-3	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTAAGTTCTTTACTCT	9099	False	NA	-6	True	NA	NA	NA	5357545	5355908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5356162_5357295
Isoform_33052_248	chr19	-	719	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	40	-1	40	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	9026	False	NA	-8	True	AATAAA	-15	NA	5416351	5414667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5415187_5415845_5415985_5416290
Isoform_33056_1513	chr19	-	735	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	524	2	-38	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8705	False	NA	-8	True	AATAAA	-15	NA	5416672	5414667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5415187_5415845_5415985_5416595
Isoform_33065_34	chr19	-	596	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	147	0	-38	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8705	False	NA	-8	True	AATAAA	-15	NA	5416672	5414667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5415187_5416595
Isoform_33067_1054	chr19	-	2529	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	26	2536	26	0	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9066	False	NA	-8	True	AATAAA	-19	NA	5438705	5430086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_33068_195	chr19	-	2570	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	-15	2536	-15	0	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9025	False	NA	-8	True	AATAAA	-19	NA	5438746	5430086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_33070_14	chr19	-	2884	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	26	0	intron_retention	FALSE	canonical	3	368	junction_1	45.1945041999195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9066	False	NA	-8	True	AATAAA	-19	NA	5438705	5430086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
Isoform_33076_4	chr19	-	916	7	FSM	ENSMUSG00000024914.17	ENSMUST00000148219.9	727	7	-211	22	9	-1	multi-exon	FALSE	canonical	3	40	junction_1	395.234705235031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5474998	5472855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5473004_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_33077_9	chr19	-	789	6	FSM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	-38	-17	-9	1	multi-exon	FALSE	canonical	3	999	junction_1	82.8700187039921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474580	5472853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388
Isoform_33078_78	chr19	-	799	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	179	14	-13	2	multi-exon	TRUE	canonical	3	999	junction_1	76.7282361469506	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474828	5472852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_33079_34	chr19	-	950	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	28	14	28	2	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474979	5472852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_33081_4	chr19	-	821	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	120	-2	-14	2	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5474829	5472852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
Isoform_33082_7	chr19	-	1704	15	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	448	11	-19	-3	3prime_fragment	FALSE	canonical	3	83	junction_4	10.1992896911541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAAGCAATGCCAAGGT	NA	False	NA	-9	True	AATAAA	-28	NA	5537982	5532870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789
Isoform_33083_95	chr19	-	1943	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	117	7	0	1	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538313	5532866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_33084_3	chr19	-	2250	14	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-39	1	intron_retention	FALSE	canonical	3	74	junction_13	11.5891195656828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538378	5532866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5533058_5533135_5533220_5533482_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
Isoform_33085_22	chr19	-	2059	13	ISM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	intron_retention	FALSE	canonical	3	118	junction_10	98.9692362414817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879
Isoform_33087_107	chr19	-	1960	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	192	2	-1	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_33088_5	chr19	-	2163	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	-9	0	-9	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3431	False	NA	-3	True	AATAAA	-18	NA	5660274	5653041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_33089_15	chr19	-	1987	14	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	117.018432776497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5659013_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_33090_23	chr19	-	1902	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	3	0	-1	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3632	False	NA	-6	True	AATAAA	-15	NA	5660073	5653044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
Isoform_33092_149	chr19	-	1804	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-16	-402	-1	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3632	False	NA	-5	True	AATAAA	-16	NA	5660073	5653043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_33093_7	chr19	-	1891	12	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	222	junction_8	63.8080800085707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3626	False	NA	-5	True	AATAAA	-16	NA	5660079	5653043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
Isoform_33094_6	chr19	-	2038	9	ISM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	6372	2	-426	1	intron_retention	TRUE	canonical	3	60	junction_4	8.95038406997152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTATTTGTGTTTG	NA	False	NA	-8	True	AAAAAG	-19	NA	5705291	5701220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574
Isoform_33096_13	chr19	-	3561	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	-8	31	7	8	multi-exon	FALSE	canonical	3	17	junction_16	17.2005632175228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAACAACAAGAA	8116	False	NA	-34	True	AAGAAA	-19	NA	5713716	5701246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
Isoform_33097_10	chr19	-	3555	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	20	8	-7	1	multi-exon	FALSE	canonical	3	8	junction_15	19.0524422464826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTATTTGTGTTTG	8117	False	NA	-8	True	AAAAAG	-19	NA	5713715	5701220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
Isoform_33098_3	chr19	-	2733	15	NIC	ENSMUSG00000056917.14	novel	3583	16	NA	NA	6	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	20.504354938124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAACAACAAGAA	8115	False	NA	-34	True	AAGAAA	-19	NA	5713717	5701246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5713631
Isoform_33099_3	chr19	-	1940	8	ISM	ENSMUSG00000054874.13	ENSMUST00000146638.2	3159	13	6432	-2	-533	-1	3prime_fragment	FALSE	canonical	3	108	junction_1	9.40256152680248	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	8756	False	NA	-3	True	NA	NA	NA	5717543	5714663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406
Isoform_33100_3	chr19	-	2540	11	ISM	ENSMUSG00000054874.13	ENSMUST00000146638.2	3159	13	1153	-1	1153	1	3prime_fragment	FALSE	canonical	3	108	junction_1	8.37615663654877	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCAGTTTTATTTTC	8893	False	NA	-4	True	NA	NA	NA	5722822	5714664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785
Isoform_33101_3	chr19	-	5337	30	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-963	-1	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_28	23.7421242965277	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5735660	5714663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119
Isoform_33102_11	chr19	-	1156	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	4	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779677	5778114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5778858_5779264
Isoform_33103_8	chr19	-	2508	5	NIC	ENSMUSG00000118125.2	novel	2532	5	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	202.957353894852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781755	5778114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5778858_5779264_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_33104_48	chr19	-	1213	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	-16	0	-14	0	multi-exon	FALSE	canonical	3	87	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779695	5778114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5778897_5779264
Isoform_33107_31	chr19	-	2527	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	4	1	4	-1	multi-exon	FALSE	canonical	3	87	junction_1	171.430744033852	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGATTGCCTGGTTAA	NA	False	NA	-3	True	AATAAA	-15	NA	5781737	5778116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_33108_13	chr19	-	1236	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	-50	3	-30	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTGATTGCCTGGTTA	NA	False	NA	-4	True	AATAAA	-14	NA	5779711	5778117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5778907_5779264
Isoform_33109_9	chr19	-	784	4	NIC	ENSMUSG00000079478.10	novel	699	4	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	217.355827056823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781755	5780352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5780741_5781161_5781354_5781471_5781624_5781703
Isoform_33110_24	chr19	-	681	4	FSM	ENSMUSG00000079478.10	ENSMUST00000159693.2	705	4	5	19	0	-19	multi-exon	FALSE	canonical	0	0	junction_2	231.015631986717	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGTTTTTCCTCCGC	NA	False	NA	-20	True	NA	NA	NA	5781755	5780353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5780741_5781268_5781354_5781466_5781624_5781703
Isoform_33111_10	chr19	-	2897	4	FSM	ENSMUSG00000079478.10_ENSMUSG00000024939.7	ENSMUST00000025885.6	699	4	18	-2216	-10	0	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781737	5778114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_33112_214	chr19	-	659	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	18	22	-10	-18	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781737	5780352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
Isoform_33114_7	chr19	-	795	3	NIC	ENSMUSG00000079478.10	novel	699	4	NA	NA	0	-18	intron_retention	FALSE	canonical	3	476	junction_2	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTTTCCTCCGCG	NA	False	NA	-19	True	NA	NA	NA	5781755	5780352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5780741_5781268_5781624_5781703
Isoform_33115_6	chr19	-	2573	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	13	0	10	0	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9920	False	NA	-11	True	AATAAA	-13	NA	5821416	5808454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_33117_25	chr19	-	2622	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	31	78	10	-2	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGGGTCCCAGCTCAG	9920	False	NA	-13	True	AATAAA	-11	NA	5821416	5808456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
Isoform_33119_4	chr19	-	3033	2	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-219	-1378	0	4	intron_retention	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAATTGTCATGGCTGT	10001	False	NA	-8	True	AATAAA	-19	NA	5895506	5892330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_5894463_5894605
Isoform_3312_3418	chr10	+	497	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	3	0	3	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	3418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6345	False	NA	30	True	AATAAA	-21	NA	80128289	80129948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
Isoform_33120_82	chr19	-	2937	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	28	1539	-7	-1539	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAATGGTTATAAT	4363	False	NA	-24	True	AATAAA	-15	NA	5925274	5901268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
Isoform_33122_3	chr19	-	3231	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	0	1273	0	-1273	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGTCTCACTGTTTTC	4335	False	NA	NA	False	AATAAA	-15	NA	5925302	5901002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
Isoform_33123_7	chr19	-	2980	11	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	1	-1537	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	59.3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAATGGTTATAATAT	4336	False	NA	-22	True	AATAAA	-17	NA	5925301	5901266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
Isoform_33126_8	chr19	-	2151	2	FSM	ENSMUSG00000044390.6	ENSMUST00000055911.6	2115	2	-42	6	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGGATGTGGAGGACC	8024	False	NA	NA	False	AATAAA	-14	NA	5944177	5941171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5943143_5943997
Isoform_33127_14	chr19	-	2143	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	11	1	11	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGGATGTGGAGGACC	8035	False	NA	NA	False	AATAAA	-14	NA	5944166	5941171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5943146_5943997
Isoform_33130_934	chr19	-	2369	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	86	859	7	12	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGACTCCT	1358	False	NA	-14	True	AATAAA	-26	NA	5962813	5947402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_33131_31	chr19	-	2437	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	8	869	8	2	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1280	False	NA	-24	True	AATAAA	-16	NA	5962891	5947412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_33132_14	chr19	-	2603	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	87	624	-7	247	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACTTTAGCATTTTC	1359	False	NA	NA	False	TATAAA	-33	NA	5962812	5947167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
Isoform_33134_14	chr19	-	1487	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	-1	1925	-1	-1925	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATCCTGTCCCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	5974845	5967588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5969022_5974791
Isoform_33137_157	chr19	-	2374	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1638	False	NA	-6	True	AATAAA	-15	NA	6014218	5990575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
Isoform_33139_118	chr19	-	2411	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	5	5	5	-5	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1631	False	NA	-5	True	AATAAA	-16	NA	6014225	5990574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_3314_47	chr10	+	766	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	-167	-27	25	0	multi-exon	FALSE	canonical	3	7729	junction_2	373	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6367	False	NA	30	True	AATAAA	-21	NA	80128311	80129948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80128695_80129475_80129711_80129800
Isoform_33140_1068	chr19	-	2389	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	27	5	-6	-5	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1653	False	NA	-5	True	AATAAA	-16	NA	6014203	5990574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_33146_17	chr19	-	2366	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	27	-2	-6	2	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1653	False	NA	NA	False	NA	NA	NA	6014203	5991132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
Isoform_33152_13	chr19	-	2300	16	ISM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	5937	0	5934	0	3prime_fragment	FALSE	canonical	2	82	junction_11	44.4894993853106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	8531	False	NA	-6	True	AATAAA	-14	NA	6059299	6038572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116
Isoform_33153_103	chr19	-	3049	22	FSM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	13	0	10	0	multi-exon	FALSE	canonical	2	82	junction_11	40.0795693849892	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2607	False	NA	-6	True	AATAAA	-14	NA	6065223	6038572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
Isoform_33154_165	chr19	-	3014	22	FSM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	43	5	40	-4	multi-exon	FALSE	canonical	2	82	junction_11	40.0795693849892	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	2637	False	NA	-11	True	AATAAA	-9	NA	6065193	6038577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
Isoform_33155_42	chr19	-	3046	22	FSM	ENSMUSG00000024942.20	ENSMUST00000164843.10	3122	22	75	1	-33	-1	multi-exon	FALSE	canonical	2	39	junction_21	51.1945734794372	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATCTGTCTCTGGGTGTT	1978	False	NA	-8	True	AATAAA	-12	NA	6065852	6038574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
Isoform_33156_12	chr19	-	3066	22	FSM	ENSMUSG00000024942.20	ENSMUST00000164843.10	3122	22	52	4	52	-4	multi-exon	FALSE	canonical	2	39	junction_21	51.1945734794372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	1955	False	NA	-11	True	AATAAA	-9	NA	6065875	6038577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
Isoform_33157_7	chr19	-	2221	17	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	5934	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	63.9987487670657	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	8531	False	NA	-6	True	AATAAA	-14	NA	6059299	6038572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6059279
Isoform_33158_5	chr19	-	3030	21	NIC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	17	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	51.2800887284724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2614	False	NA	-6	True	AATAAA	-14	NA	6065216	6038572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
Isoform_33159_117	chr19	-	1711	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	30	23	3	-23	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAATAATCATCTGAAA	NA	False	NA	-23	True	ATTAAA	-19	NA	6107785	6103674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_33160_336	chr19	-	683	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	30	1051	3	258	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGTCCACTTGAG	NA	False	NA	-8	True	CATAAA	-18	NA	6107785	6104702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_33165_7	chr19	-	1770	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	-29	23	-29	-23	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAATAATCATCTGAAA	10007	False	NA	-23	True	ATTAAA	-19	NA	6107844	6103674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
Isoform_33170_8	chr19	-	1309	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	3	-1	3	1	multi-exon	FALSE	canonical	3	20	junction_2	445.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGGTGTTCAGAACCTG	NA	False	NA	-14	True	ATTAAA	-16	NA	6107785	6103925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6105013_6105105_6105231_6107688
Isoform_33172_7	chr19	-	1187	8	ISM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	733	0	-17	0	3prime_fragment	FALSE	canonical	3	192	junction_3	31.9125079438346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	4735	False	NA	0	True	AATAAA	-15	NA	6117139	6112850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997
Isoform_33173_82	chr19	-	1454	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	16	1	1	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	-5	True	NA	-1	True	AATAAA	-14	NA	6117856	6112851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
Isoform_33174_5	chr19	-	1281	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	79.8254932649965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9953	False	NA	-1	True	AATAAA	-14	NA	6117880	6112851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117698
Isoform_33175_11	chr19	-	908	5	FSM	ENSMUSG00000024799.17	ENSMUST00000160354.8	1443	5	-64	599	2	3	multi-exon	FALSE	canonical	3	213	junction_4	26.5988721565408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGAGCGCGCGCATTT	9963	False	NA	-7	True	TATAAA	-16	NA	6117870	6116155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
Isoform_33176_239	chr19	-	2488	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	36	151	3	-3	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTCTTGCCTGCAGG	1023	False	NA	-6	True	AATAAA	-15	NA	6127225	6118022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_33177_126	chr19	-	2514	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	12	149	12	-1	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	999	False	NA	-4	True	AATAAA	-17	NA	6127249	6118020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_33178_5	chr19	-	2862	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	124	junction_6	17.2753437013566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1016	False	NA	-4	True	AATAAA	-17	NA	6127232	6118020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_33180_10	chr19	-	2585	10	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.903548909307	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	994	False	NA	-4	True	AATAAA	-17	NA	6127254	6118020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6118472_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_33182_6	chr19	-	2231	9	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	15	908	-13	-1	5prime_fragment	FALSE	canonical	3	124	junction_6	16.0735613664178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTCTCTAGGTCCAG	1002	False	NA	NA	False	ATTAAA	-15	NA	6127246	6118779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
Isoform_33184_10	chr19	-	857	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	-17	0	-14	0	multi-exon	FALSE	canonical	3	178	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTAACTTTTGTTTC	1001	False	NA	1	True	ATTAAA	-20	NA	6127247	6125932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6126523_6126980
Isoform_33185_13	chr19	-	1273	8	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	201.730978669866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCTGAAGCAGCTT	6668	False	NA	NA	False	AATAAA	-14	NA	6134745	6130795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134675
Isoform_33186_294	chr19	-	1334	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-10	-402	2	-1	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCTGAAGCAGCTT	6458	False	NA	NA	False	AATAAA	-14	NA	6134955	6130795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
Isoform_33187_146	chr19	-	1267	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	18	2	2	1	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGAAGCAGCTTTT	6458	False	NA	NA	False	AATAAA	-16	NA	6134955	6130793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
Isoform_33188_5	chr19	-	1973	7	NIC	ENSMUSG00000024792.10	novel	922	8	NA	NA	2	3	intron_retention	FALSE	canonical	3	381	junction_6	94.6766426668514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGCAGCTTTTTCCAT	6458	False	NA	NA	False	AATAAA	-21	NA	6134955	6130788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
Isoform_33189_192	chr19	-	1303	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	136	3	136	-3	multi-exon	FALSE	canonical	3	283	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAACAGGAACTTTTA	NA	False	NA	-12	True	AATAAA	-22	NA	6168544	6166032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6166618_6167826
Isoform_33191_4	chr19	-	1497	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	136	-191	136	191	multi-exon	FALSE	canonical	3	283	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	6168544	6165838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6166618_6167826
Isoform_33193_49	chr19	-	1596	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	38	1	38	-1	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTCCATTTGCTTATT	NA	False	NA	0	True	NA	NA	NA	6178296	6169429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
Isoform_33194_316	chr19	-	871	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	412	3	4	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191166	6184415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
Isoform_33196_43	chr19	-	894	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	389	3	-19	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191189	6184415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
Isoform_33197_12	chr19	-	3469	3	NIC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	728	junction_2	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191169	6184415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6187671_6187759_6187871_6191066
Isoform_33198_18	chr19	-	737	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	1	2744	1	352	5prime_fragment	FALSE	canonical	3	728	junction_2	28	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTCTGTATCTCAGG	NA	False	NA	24	True	NA	NA	NA	6191169	6187147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_6187671_6187759_6187871_6191066
Isoform_33199_202	chr19	-	2717	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	24	1	-5	-1	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6285878	6277795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
Isoform_33200_6	chr19	-	2833	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	82	junction_10	12.3903524297468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6285884	6277795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
Isoform_33201_3	chr19	-	600	3	FSM	ENSMUSG00000079467.9	ENSMUST00000113496.2	518	3	-15	-67	-15	-9	multi-exon	FALSE	canonical	2	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCACCTAAACACATAA	NA	False	NA	NA	False	NA	NA	NA	6413804	6405560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6405871_6410689_6410812_6413636
Isoform_33202_22	chr19	-	3177	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	-36	-1	-36	1	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6818040	6806576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
Isoform_33203_42	chr19	-	3118	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	27	-5	3	5	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGGTTTGTGTTCAT	NA	False	NA	-1	True	AATAAA	-23	NA	6817977	6806572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
Isoform_33204_106	chr19	-	811	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	451	0	-38	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887023	6884073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_33205_98	chr19	-	1232	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	30	0	30	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887444	6884073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_33208_13	chr19	-	1591	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	-329	0	-329	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887803	6884073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
Isoform_33211_400	chr19	-	2248	7	FSM	ENSMUSG00000024955.16	ENSMUST00000025906.12	2241	7	-6	-1	-1	0	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGTCGGTGAGTCAC	9679	False	NA	0	True	AATATA	-17	NA	6899182	6888344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
Isoform_33213_11	chr19	-	2344	7	NIC	ENSMUSG00000024955.16	novel	2274	7	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	35.8457342882897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACGGTGGTCGGTGAG	9676	False	NA	-4	True	AATATA	-13	NA	6899185	6888348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891661_6897430_6897768_6898989
Isoform_33215_7	chr19	-	756	5	FSM	ENSMUSG00000050623.6	ENSMUST00000057716.6	784	5	25	3	-3	-2	multi-exon	FALSE	canonical	3	36	junction_4	4.76969600708473	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	7415	False	NA	-2	True	ATTAAA	-19	NA	6902723	6899793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902475_6902659
Isoform_33216_3	chr19	-	2123	7	NIC	ENSMUSG00000024958.14	novel	1858	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	8.95203266799719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	6529	False	NA	-14	True	AATAAA	-17	NA	6918845	6915439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6915898_6916123_6916243_6916379_6916505_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_33217_3	chr19	-	2226	6	FSM	ENSMUSG00000024958.14	ENSMUST00000238183.2	1255	6	-973	2	12	0	multi-exon	FALSE	canonical	3	22	junction_3	2.68328157299975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	6511	False	NA	-14	True	AATAAA	-17	NA	6918863	6915439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719
Isoform_33218_88	chr19	-	2158	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-313	13	1	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	6500	False	NA	-12	True	AATAAA	-19	NA	6918874	6915437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_33219_3	chr19	-	3102	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	-1254	10	3	2	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCACTCGTCTGTT	5559	False	NA	-9	True	AATAAA	-22	NA	6919815	6915434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
Isoform_3322_80	chr10	+	1898	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	229	0	-16	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7256	False	NA	18	True	AATAAA	-19	NA	80166015	80172275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
Isoform_33220_3	chr19	-	1627	7	NIC	ENSMUSG00000024958.14	novel	1729	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	9.63356401107895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGTCACTCGTCTG	6504	False	NA	-11	True	AATAAA	-20	NA	6918870	6915436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917851_6918459
Isoform_3323_7	chr10	+	2066	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	28	6	28	-6	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCTGCTTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	80192320	80201317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
Isoform_33230_593	chr19	-	4232	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	25	0	25	0	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4336	False	NA	-8	True	AATAAA	-16	NA	6947157	6931080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
Isoform_33231_13	chr19	-	4141	31	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_30	127.230940506711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	NA	False	NA	-11	True	AATAAA	-13	NA	6951717	6931083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6951562
Isoform_33239_126	chr19	-	598	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	70	-4	9	1	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTGTATTTCTT	NA	False	NA	-2	True	TTTAAA	-36	NA	6957799	6955107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
Isoform_3324_59	chr10	+	1393	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	12	6	-4	-6	multi-exon	FALSE	canonical	3	56	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTTGCCGTTTGCAC	NA	False	NA	-3	True	AATAAA	-9	NA	80438725	80443482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80438784_80442147
Isoform_33240_3	chr19	-	774	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	46	-156	-15	153	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATATCTTCCCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	6957823	6954955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
Isoform_33241_61	chr19	-	667	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-24	-1	-24	1	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTGTATTTCTT	NA	False	NA	-2	True	TTTAAA	-36	NA	6957832	6955107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
Isoform_33242_27	chr19	-	1201	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-44	1	-22	-1	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4736	False	NA	-2	True	GATAAA	-16	NA	6965041	6959841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_33244_19	chr19	-	1248	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-90	0	-68	0	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4690	False	NA	-1	True	GATAAA	-17	NA	6965087	6959840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_33245_4	chr19	-	1154	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGCTTCTGTCATT	4739	False	NA	-3	True	GATAAA	-15	NA	6965038	6959842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_33246_4	chr19	-	996	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	118	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4898	False	NA	-2	True	GATAAA	-16	NA	6964879	6959841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_33248_15	chr19	-	1346	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-64	-1	-64	1	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4694	False	NA	0	True	GATAAA	-18	NA	6965083	6959839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_33249_24	chr19	-	1282	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	0	-1	0	1	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4758	False	NA	0	True	GATAAA	-18	NA	6965019	6959839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
Isoform_3325_10	chr10	+	4300	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	-1	intron_retention	TRUE	canonical	3	56	junction_1	229.039601136766	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCCTTTATCTGTG	NA	False	NA	12	True	AATAAA	-12	NA	80438705	80451616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33250_9	chr19	-	1305	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-68	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	99.8651090221204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4690	False	NA	-2	True	GATAAA	-16	NA	6965087	6959841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964719
Isoform_33252_8	chr19	-	1068	6	FSM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	-228	0	3	0	multi-exon	FALSE	canonical	3	37	junction_3	69.5097115516961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9279	False	NA	-4	True	AATAAA	-17	NA	6969868	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526
Isoform_33253_10	chr19	-	874	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	78.2788817838715	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969916
Isoform_33254_4	chr19	-	937	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	86.5653253650418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969853
Isoform_33255_53	chr19	-	1057	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	17	0	17	0	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9293	False	NA	-4	True	AATAAA	-17	NA	6969854	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
Isoform_33258_50	chr19	-	875	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	60.0194412947449	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCGATTCGGTCCTTC	9935	False	NA	-6	True	AATAAA	-15	NA	6969950	6965280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969916
Isoform_33259_4	chr19	-	877	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-14	2	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	72.0819364026491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGATTCGGTCCTTCAGGT	10000	False	NA	-2	True	AATAAA	-19	NA	6969885	6965276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969853
Isoform_33260_11	chr19	-	763	6	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	77.5035483058679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9935	False	NA	-4	True	AATAAA	-17	NA	6969950	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969916
Isoform_33261_6	chr19	-	1146	5	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	188	junction_2	20.6942020865749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9297	False	NA	-4	True	AATAAA	-17	NA	6969850	6965278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_6965477_6965556_6965644_6966790_6967234_6968085_6968180_6969526
Isoform_33262_68	chr19	-	1020	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	7025	False	NA	-3	True	AATAAA	-17	NA	6973425	6970385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
Isoform_33263_7	chr19	-	1835	11	ISM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	5252	21	5128	0	3prime_fragment	FALSE	canonical	3	13	junction_3	4.73392015141785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	7850	False	NA	-8	True	AATAAA	-17	NA	6991585	6976346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427
Isoform_33265_4	chr19	-	2498	15	FSM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	70	19	0	2	multi-exon	FALSE	canonical	0	0	junction_12	9.77945576717032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTTCTTCCTCCTCT	5502	False	NA	-6	True	AATAAA	-19	NA	6996767	6976344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984_6992219_6996033_6996208_6996645
Isoform_33266_6	chr19	-	768	3	NNC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	19374	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTCCTCCTCTG	8113	False	NA	-5	True	AATAAA	-20	NA	6977339	6976343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_6976889_6977006_6977149_6977258
Isoform_3327_7	chr10	+	1757	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438726	80451617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33272_1465	chr19	-	2106	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	3	-1	3	1	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTCTCCAGTGACTTTC	3766	False	NA	-7	True	AATAAA	-30	NA	7017332	6998068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
Isoform_33273_220	chr19	-	2133	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-26	1	-26	-1	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	3737	False	NA	-9	True	AATAAA	-28	NA	7017361	6998070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
Isoform_33279_318	chr19	-	1023	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	46	644	-36	-636	multi-exon	FALSE	canonical	3	1089	junction_1	76.373351955305	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183635	7176210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
Isoform_3328_234	chr10	+	1805	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	-1	0	1	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438713	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33280_109	chr19	-	1658	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	46	9	-36	-1	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTCTGCTGTCTGGC	NA	False	NA	-7	True	AATAAA	-17	NA	7183635	7175575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
Isoform_33282_3510	chr19	-	497	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	44	9	-29	-9	multi-exon	FALSE	canonical	3	12296	junction_1	0	3510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAAATGCATCATGTC	7410	False	NA	NA	False	AATAAA	-17	NA	7194937	7192526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7192850_7194763
Isoform_33286_51	chr19	-	3239	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	-8	0	-8	0	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218556	7203037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_33287_154	chr19	-	3102	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	129	0	0	0	multi-exon	TRUE	canonical	3	441	junction_1	30.7431757816732	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218419	7203037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_33289_3	chr19	-	3106	7	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-38	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.38377594474	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGCTGGGATGGCATC	NA	False	NA	-23	True	AATAAA	-13	NA	7218586	7203040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_7205457_7205716_7205794_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_3329_5	chr10	+	1976	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_6	283.291801677986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438713	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
Isoform_33290_7	chr19	-	2953	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	179.745576363432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGCTGGGATGGCATC	NA	False	NA	-23	True	AATAAA	-13	NA	7218432	7203040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_33291_3	chr19	-	3454	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	-129	-1756	0	0	multi-exon	FALSE	canonical	3	441	junction_1	33.2060235499525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218548	7203037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
Isoform_33292_11	chr19	-	3246	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_5	122.221904361768	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	4111	False	NA	NA	False	AAGAAA	-14	NA	7318974	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_33294_15	chr19	-	2894	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAGAAAAAGAAAAAA	3862	False	NA	NA	False	AAGAAA	-12	NA	7319223	7254124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_33298_16	chr19	-	3279	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	-618	-1	2	1	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3910	False	NA	NA	False	AAGAAA	-14	NA	7319175	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_33299_37	chr19	-	2693	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3897	False	NA	NA	False	AAGAAA	-14	NA	7319188	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_33301_120	chr19	-	3063	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-188	-1	-17	1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	4099	False	NA	NA	False	AAGAAA	-14	NA	7318986	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_33302_110	chr19	-	3253	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-378	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3909	False	NA	NA	False	AAGAAA	-14	NA	7319176	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
Isoform_33306_14	chr19	-	2751	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3899	False	NA	NA	False	AAGAAA	-14	NA	7319186	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
Isoform_33307_166	chr19	-	2667	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3896	False	NA	NA	False	AAGAAA	-14	NA	7319189	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_33308_132	chr19	-	2697	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3866	False	NA	NA	False	AAGAAA	-14	NA	7319219	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_3331_5	chr10	+	1749	6	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	254.352039504306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438721	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80438784_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33311_9	chr19	-	2504	17	NIC	ENSMUSG00000024969.16	novel	3104	17	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	61.0913442620966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	3897	False	NA	NA	False	AAGAAA	-14	NA	7319188	7254122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
Isoform_33312_743	chr19	-	1925	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	1	1226	1	-3	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTGTGTGGGCTATC	NA	False	NA	NA	False	AATAAA	-18	NA	7360358	7335053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
Isoform_33313_261	chr19	-	1949	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-29	1232	-29	-9	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAAAGTTCTGTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	7360388	7335059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
Isoform_33315_26	chr19	-	1994	5	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	2	-8	intron_retention	FALSE	canonical	3	309	junction_2	11.4345966260293	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360357	7335058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7352216_7360036
Isoform_3332_9	chr10	+	1357	3	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	2	9	junction_1	345	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80438784_80448175_80448294_80450437
Isoform_33322_408	chr19	-	2812	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-47	-3	18	3	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGCAACTTTATTCT	8992	False	NA	-15	True	AATAAA	-20	NA	7460614	7403262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
Isoform_3333_6	chr10	+	1812	7	FSM	ENSMUSG00000113949.2	ENSMUST00000180350.3	1271	7	280	-821	280	1	multi-exon	FALSE	canonical	3	35	junction_1	236.742945453972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80439070	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33334_10	chr19	-	2456	10	FSM	ENSMUSG00000024972.17	ENSMUST00000159983.8	2470	10	15	-1	0	1	multi-exon	FALSE	canonical	2	3	junction_8	5.03322295684717	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTAGTGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	7584543	7574023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026_7584189_7584491
Isoform_33336_352	chr19	-	1401	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	9	-17	9	17	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	NA	False	NA	-4	True	AATAAA	-19	NA	8690340	8684933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
Isoform_33338_2087	chr19	-	1862	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	7	-50	7	20	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8691236	8684930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
Isoform_3334_6	chr10	+	2029	7	NIC	ENSMUSG00000035370.10	novel	4517	6	NA	NA	-239	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	244.454097031642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80442409	80451618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80442704_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
Isoform_33346_164	chr19	-	2034	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	91	688	-80	17	multi-exon	FALSE	canonical	3	190	junction_9	923.220423635268	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	9120	False	NA	-4	True	AATAAA	-19	NA	8700642	8684933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
Isoform_33357_14	chr19	-	759	5	FSM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	13	3	-9	-2	multi-exon	FALSE	canonical	3	67	junction_4	80.9073544246751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	5087	False	NA	-7	True	AATATA	-14	NA	8751818	8749891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8750987_8751698
Isoform_33358_26	chr19	-	831	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	11	-24	-11	-2	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	5085	False	NA	-7	True	AATATA	-14	NA	8751820	8749891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
Isoform_33360_7	chr19	-	650	4	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	106.565577097965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5081	False	NA	-4	True	AATATA	-17	NA	8751824	8749888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8750199_8750391_8750471_8750653_8750789_8751698
Isoform_33364_18	chr19	-	2231	13	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	69.7284415110187	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9929	False	NA	-4	True	AATAAA	-13	NA	8763652	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8762996_8763192_8763573
Isoform_33366_513	chr19	-	2037	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	27	1	-8	-1	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9928	False	NA	-4	True	AATAAA	-13	NA	8763653	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_33367_62	chr19	-	2066	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	-2	1	-2	-1	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9899	False	NA	-4	True	AATAAA	-13	NA	8763682	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_33368_10	chr19	-	2413	12	FSM	ENSMUSG00000003680.17_ENSMUSG00000118346.2	ENSMUST00000176610.9	2065	12	22	-370	-13	365	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGTGTA	9923	False	NA	NA	False	NA	NA	NA	8763658	8751485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_33369_7	chr19	-	1977	12	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	58.6434808929319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9930	False	NA	-4	True	AATAAA	-13	NA	8763651	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763631
Isoform_33370_25	chr19	-	1978	11	FSM	ENSMUSG00000003680.17	ENSMUST00000177056.8	2006	11	29	-1	-6	-1	multi-exon	FALSE	canonical	3	11	junction_10	58.7504042539283	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9930	False	NA	-4	True	AATAAA	-13	NA	8763651	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8763573
Isoform_33371_9	chr19	-	1964	11	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	60.2213417319807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTGTCTATGCTCGT	9926	False	NA	-4	True	AATAAA	-13	NA	8763655	8751856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
Isoform_33373_952	chr19	-	865	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	25	0	-17	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775916	8770490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
Isoform_33374_69	chr19	-	894	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775945	8770490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
Isoform_33375_11	chr19	-	708	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	548.478324295703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTTTGGTTTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	8775921	8770492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8775587_8775698_8775822
Isoform_33378_7	chr19	-	3516	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	299	-2230	-71	9	multi-exon	FALSE	canonical	3	241	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAAATTTATTTCACT	2223	False	NA	-4	True	AATAAA	-20	NA	8796359	8786429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8789203_8793217_8793401_8795799
Isoform_33380_37	chr19	-	3467	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	45	-3	6	3	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATCTTAGAAATTTAT	1930	False	NA	-10	True	AATAAA	-14	NA	8796652	8786435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
Isoform_33381_15	chr19	-	3514	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	4	-9	4	9	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAAATTTATTTCACT	1889	False	NA	-4	True	AATAAA	-20	NA	8796693	8786429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
Isoform_33392_71	chr19	-	782	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-16	877	-16	-877	multi-exon	TRUE	canonical	3	189	junction_2	8	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTCTGTGTTAGCG	4746	False	NA	-4	True	AATAAA	-19	NA	8816574	8815173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8815636_8815917_8816018_8816354
Isoform_33394_102	chr19	-	535	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	29	257	29	-257	multi-exon	FALSE	canonical	3	500	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCGCAGCTGGAC	NA	False	NA	-12	True	AATAAA	-17	NA	8858258	8857634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8857981_8858069
Isoform_33396_26	chr19	-	789	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	29	3	29	-3	multi-exon	FALSE	canonical	3	500	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTTGGAAAGACCAT	NA	False	NA	-11	True	AATGAA	-22	NA	8858258	8857380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8857981_8858069
Isoform_33398_149	chr19	-	1967	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	52	2176	52	-2176	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAGTGTGGTTAGG	NA	False	NA	NA	False	AATAAA	-14	NA	9112948	9089407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
Isoform_33402_29	chr19	-	3078	19	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-60	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	145.134516148908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876851	9849765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_33406_9	chr19	-	3120	18	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	69	junction_17	97.2156665005635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTGTGGATATTGT	NA	False	NA	32	True	AATAAA	-13	NA	9876851	9849707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872832_9876702
Isoform_33407_303	chr19	-	3066	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	64	106	2	-60	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876851	9849765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_33408_95	chr19	-	3124	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	64	48	2	-2	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTGTGGATATTGT	NA	False	NA	32	True	AATAAA	-13	NA	9876851	9849707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_33410_32	chr19	-	3168	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	62	6	0	-6	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGTCTGCAGCAGTAT	NA	False	NA	-9	True	NA	NA	NA	9876853	9849665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_33412_19	chr19	-	3155	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	33	48	-29	-2	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTGTGGATATTGT	NA	False	NA	32	True	AATAAA	-13	NA	9876882	9849707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
Isoform_33425_10	chr19	-	3059	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	90	1	90	-1	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCCTGTAGTTCAGCAA	9961	False	NA	-5	True	AATAAA	-24	NA	10079020	10040129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
Isoform_3343_126	chr10	+	2475	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-120	-7	-120	-1	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGCCTGGGCTTTACC	NA	False	NA	16	True	GGGGCT	-43	NA	80458551	80476582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
Isoform_33431_1255	chr19	-	2182	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	159	0	-15	0	multi-exon	FALSE	canonical	3	832	junction_1	0	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2189	False	NA	NA	False	AATAAA	-14	NA	10181273	10176501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10178462_10181051
Isoform_33436_142	chr19	-	2171	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	-15	-4	-15	0	multi-exon	FALSE	canonical	3	104	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2189	False	NA	NA	False	AATAAA	-14	NA	10181273	10176501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10178462_10181062
Isoform_33438_543	chr19	-	2078	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	22	0	22	0	multi-exon	FALSE	canonical	3	443	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2177	False	NA	NA	False	AATAAA	-14	NA	10181285	10176501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10178462_10181167
Isoform_33440_55	chr19	-	1876	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	2	1103	2	4	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTGATCTACATCC	NA	False	NA	NA	False	AATAAA	-21	NA	10502477	10479000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
Isoform_33442_14	chr19	-	1235	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-72	1818	-5	-4	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTGGCATTGAGGC	NA	False	NA	-8	True	NA	NA	NA	10502551	10479715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
Isoform_33443_5	chr19	-	1820	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-117	-706	-27	3	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTTTGATCTACATC	NA	False	NA	NA	False	AATAAA	-20	NA	10502573	10479001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
Isoform_33446_7	chr19	-	874	6	NIC	ENSMUSG00000024667.13	novel	876	6	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.4717403753266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGCTGGTTGATTTT	NA	False	NA	-8	True	AATAAA	-12	NA	10533102	10527829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
Isoform_33447_15	chr19	-	1029	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	-3	-27	2	3	multi-exon	FALSE	canonical	3	35	junction_4	20.6079474960511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGCTGGTTGATTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	10533118	10527828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
Isoform_33448_24	chr19	-	1032	5	FSM	ENSMUSG00000024667.13	ENSMUST00000154383.2	927	5	-20	-85	-15	3	multi-exon	FALSE	canonical	3	49	junction_4	15.1224171348366	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGCTGGTTGATTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	10533135	10527828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
Isoform_33449_9	chr19	-	1555	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-300	5	-45	-5	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1465	False	NA	-11	True	AATAAA	-8	NA	10554771	10547848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
Isoform_33452_4	chr19	-	1512	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	10	7	4	-5	multi-exon	FALSE	canonical	3	12	junction_4	65.3543227338483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1795	False	NA	-11	True	AATAAA	-8	NA	10554441	10547848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
Isoform_33453_17	chr19	-	1420	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1795	False	NA	-4	True	AATAAA	-15	NA	10554441	10547841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
Isoform_33455_12	chr19	-	1615	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	-32	7	-32	-5	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1478	False	NA	-11	True	AATAAA	-8	NA	10554758	10547848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_33457_57	chr19	-	1335	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	255	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1765	False	NA	-4	True	AATAAA	-15	NA	10554471	10547841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_33459_3	chr19	-	1882	4	FSM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	-294	5	-39	-5	multi-exon	FALSE	canonical	3	102	junction_3	28.0158685192676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1471	False	NA	-11	True	AATAAA	-8	NA	10554765	10547848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_33460_3	chr19	-	1596	4	FSM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	-8	5	-8	-5	multi-exon	FALSE	canonical	3	102	junction_3	28.0158685192676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1757	False	NA	-11	True	AATAAA	-8	NA	10554479	10547848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10548969_10552200_10552373_10552603_10552876_10554447
Isoform_33462_16	chr19	-	2747	18	NIC	ENSMUSG00000034371.10	novel	2437	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	12.7406930547585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9755	False	NA	-25	True	AATAAA	-15	NA	10582782	10569562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304
Isoform_33463_21	chr19	-	2473	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-37	1	-3	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGTCCCTGTTTAC	9752	False	NA	-24	True	AATAAA	-16	NA	10582785	10569561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
Isoform_33465_58	chr19	-	2293	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	222	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9741	False	NA	-25	True	AATAAA	-15	NA	10582796	10569562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
Isoform_33466_4	chr19	-	2449	17	NNC	ENSMUSG00000034371.10	novel	2253	17	NA	NA	1286	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.8962828752362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	NA	False	NA	-25	True	AATAAA	-15	NA	10580336	10569562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10580050
Isoform_33467_52	chr19	-	3485	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	161	11	-1	1	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGGTACTGCTGTGA	NA	False	NA	-10	True	AATAAA	-16	NA	10847143	10835196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_33468_12	chr19	-	3503	11	NNC	ENSMUSG00000024736.16	novel	3657	11	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	16.1496129984591	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTACTGCTGTGACACT	NA	False	NA	-6	True	AATAAA	-20	NA	10847154	10835192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841028_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_33469_9	chr19	-	3902	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	-6	-1	-6	1	multi-exon	FALSE	canonical	3	39	junction_7	10.088497300281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGGTACTGCTGTGA	NA	False	NA	-10	True	AATAAA	-16	NA	10847148	10835196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
Isoform_33470_6	chr19	-	2037	4	FSM	ENSMUSG00000034659.15	ENSMUST00000133303.8	839	4	-11	-1187	-11	-3	multi-exon	TRUE	canonical	1	1	junction_3	71.4749373323731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTGCTGACAAACT	NA	False	NA	-6	True	AATAAA	-14	NA	10857745	10848026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10857543
Isoform_33471_339	chr19	-	1930	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	255	3	-15	-3	multi-exon	FALSE	canonical	3	149	junction_2	8.28653526310404	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTGCTGACAAACT	NA	False	NA	-6	True	AATAAA	-14	NA	10859110	10848026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
Isoform_33473_11	chr19	-	2083	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	0	920	0	-920	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTGAAATAATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	10926630	10919764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
Isoform_33477_16	chr19	-	2663	12	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	185.459046291195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGGGTACTAGTTGTA	7149	False	NA	-19	True	AATAAA	-19	NA	11796294	11752481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_33479_5	chr19	-	2544	11	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	11	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	192.742937613807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGTTGTTGGGTACTA	7148	False	NA	-25	True	AATAAA	-13	NA	11796295	11752487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_11753953_11754451_11754535_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_33482_16	chr19	-	2793	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	12	5	12	-5	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCTGGGGCCATCT	7149	False	NA	-13	True	AATAAA	-20	NA	11796294	11754853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
Isoform_33488_4	chr19	-	1936	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	668	2927	668	1564	multi-exon	TRUE	canonical	3	113	junction_5	14.0003571383019	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAACTGAAGGGCCTG	NA	False	NA	-18	True	GATAAA	-37	NA	12772822	12747310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
Isoform_33495_2108	chr19	-	2093	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	76	448	-53	1	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	2108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGCCTGTGAATTATT	NA	False	NA	-13	True	ATTAAA	-21	NA	15902347	15882489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
Isoform_33503_5	chr19	-	2630	16	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	54.2496287749716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTGAGTGATAAAATAC	162	False	NA	NA	False	AATAAA	-18	NA	15962366	15933135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_15933768_15935458_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_33506_151	chr19	-	2572	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-20	-4	-20	3	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	155	False	NA	NA	False	AATAAA	-20	NA	15962373	15933133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_33507_3	chr19	-	2410	14	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	45.1929459856724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	185	False	NA	NA	False	AATAAA	-17	NA	15962343	15933136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_33508_19	chr19	-	2391	14	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	44.4826939288933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	167	False	NA	NA	False	AATAAA	-20	NA	15962361	15933133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
Isoform_3351_3	chr10	+	1763	9	FSM	ENSMUSG00000020211.16	ENSMUST00000151928.8	781	9	-69	-913	-69	-4	multi-exon	FALSE	canonical	3	55	junction_7	448.68263770175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCTGTCTGCTGTGT	4817	False	NA	25	True	ATTAAA	-13	NA	80634496	80640754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639634_80639723_80639805
Isoform_33510_8	chr19	-	2765	25	ISM	ENSMUSG00000046230.12	ENSMUST00000224149.2	10037	74	-127	94094	-16	11481	5prime_fragment	TRUE	canonical	3	25	junction_11	6.24666577730339	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAATTACAAAAGAAAG	NA	False	NA	NA	False	GATAAA	-12	NA	16758313	16688220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
Isoform_33512_25	chr19	-	2103	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	27	2476	27	52	multi-exon	FALSE	canonical	3	31	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTATCCTTGTAAATAA	8061	False	NA	NA	False	AATAGA	-16	NA	17334004	17305980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_17307853_17310473_17310621_17333920
Isoform_33513_5	chr19	-	4550	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	50	6	50	-4	multi-exon	FALSE	canonical	3	31	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGCTATGTCTGCAC	8084	False	NA	-4	True	AATAAA	-15	NA	17333981	17303510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_17307853_17310473_17310621_17333920
Isoform_33514_5	chr19	-	3294	21	FSM	ENSMUSG00000024713.17	ENSMUST00000050715.10	5768	21	0	2474	0	2080	multi-exon	FALSE	canonical	0	0	junction_6	1.83303027798234	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAAACTGCAAGCCAC	NA	False	NA	NA	False	ATTAAA	-11	NA	17814996	17538011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_17538194_17541145_17541262_17542073_17542204_17542631_17542730_17545632_17545718_17549787_17549982_17553169_17553273_17558499_17558644_17563373_17563511_17571903_17572093_17573024_17573143_17595014_17595119_17619856_17619958_17632051_17632265_17652784_17652958_17655832_17655922_17689278_17689356_17692121_17692266_17729426_17729541_17770992_17771098_17814318
Isoform_33515_50	chr19	-	1330	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-30	1426	4	55	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGATTCGATGTTACT	NA	False	NA	-2	True	AATAAA	-19	NA	18609183	18558117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
Isoform_33516_265	chr19	-	1235	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	7	1484	7	-3	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGTTTTTGTGCTATC	NA	False	NA	-5	True	AATAAA	-18	NA	18609146	18558175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
Isoform_3352_21	chr10	+	1731	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	482	0	-52	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4834	False	NA	29	True	ATTAAA	-17	NA	80634513	80640758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_33520_161	chr19	-	1090	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-30	1666	4	-2	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTGTAATAGTTTTT	NA	False	NA	-4	True	AATAAA	-32	NA	18609183	18558357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
Isoform_33524_6	chr19	-	1400	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	272	2	1	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	7277	False	NA	0	True	AATAAA	-21	NA	20368036	20350793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
Isoform_33525_34	chr19	-	1438	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	176	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
Isoform_33526_4	chr19	-	1332	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179553.2	942	3	-1	-389	-1	0	multi-exon	FALSE	canonical	3	15	junction_2	89.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	628	False	NA	NA	False	AATAAA	-21	NA	21630165	21574675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_21575699_21576118_21576233_21629970
Isoform_33527_14	chr19	-	1858	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	117	-1013	0	0	multi-exon	FALSE	canonical	3	207	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_21576233_21596472_21596580_21629970
Isoform_33528_4	chr19	-	820	6	ISM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-2	51004	-2	3851	5prime_fragment	FALSE	canonical	3	317	junction_3	34.4290574950869	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGATGTGGAAAGATTC	NA	False	NA	NA	False	AATGAA	-8	NA	23251263	23237090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
Isoform_3353_47	chr10	+	1693	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	520	0	-14	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4872	False	NA	29	True	ATTAAA	-17	NA	80634551	80640758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
Isoform_33531_122	chr19	-	4655	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	70	-5	combination_of_known_junctions	TRUE	canonical	0	0	junction_23	82.6461699898347	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202320	24071873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_33532_78	chr19	-	4584	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	0	-128	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTAGTGCTGAGTCT	NA	False	NA	-8	True	AATAAA	-14	NA	24202390	24072014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_33534_19	chr19	-	4796	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-67	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202461	24071873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_33538_8	chr19	-	4604	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	0	-13	0	-5	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACATAAAAATGTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	24202390	24071873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
Isoform_33545_4	chr19	-	585	5	ISM	ENSMUSG00000024812.12	ENSMUST00000232956.2	4728	24	81	38018	77	5	5prime_fragment	FALSE	canonical	0	0	junction_4	166.67408316832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAATCTTCAAAA	NA	False	NA	NA	False	AATAAA	-3	NA	24202313	24109886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
Isoform_33547_7	chr19	-	2652	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	18	-1556	18	1556	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTGTCCCTTTGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	24257951	24237260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
Isoform_33549_85	chr19	-	793	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	18	303	18	106	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCCGGACCTGGCT	NA	False	NA	-7	True	AAAAAG	-15	NA	24257951	24239119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
Isoform_33553_17	chr19	-	2675	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-103	1	-103	-1	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTCATACATTGATT	NA	False	NA	-1	True	AATAAA	-15	NA	24533339	24272158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
Isoform_33554_16	chr19	-	2950	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-378	1	-378	-1	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTCATACATTGATT	NA	False	NA	-1	True	AATAAA	-15	NA	24533614	24272158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
Isoform_33559_13	chr19	-	2212	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	1	-284	1	284	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTTAATTTTCTGT	NA	False	NA	-4	True	ATTAAA	-18	NA	24938964	24896995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_33561_51	chr19	-	1414	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	1	514	1	-514	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATCCTCTGGAGGTT	NA	False	NA	-35	True	AGTAAA	-29	NA	24938964	24897793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_33562_10	chr19	-	1465	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-52	516	-43	-516	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATATCCTCTGGAGG	NA	False	NA	-37	True	AGTAAA	-27	NA	24939017	24897795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
Isoform_33572_360	chr19	-	2148	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-39	1362	-39	1	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACCTTTGGTTTAAT	NA	False	NA	-16	True	TATAAA	-11	NA	27407264	27367459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
Isoform_33573_13	chr19	-	3494	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-26	3	-26	-3	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGTTTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	27407251	27366100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
Isoform_3358_4282	chr10	+	1040	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	4282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662519	80665119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
Isoform_33582_18	chr19	-	2807	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	1	1	1	-1	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCGGGCTGTCTCCATGT	NA	False	NA	-2	True	AATAAA	-15	NA	29025360	28998233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
Isoform_33584_33	chr19	-	814	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	104	102	7	4	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGGCAGTATTCTAAA	NA	False	NA	-101	True	AATAAA	-19	NA	29339266	29326100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
Isoform_33585_4	chr19	-	906	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	110	4	13	-4	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCCCAATGTCCTGCTG	NA	False	NA	-3	True	AATAAA	-17	NA	29339260	29326002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
Isoform_33586_9	chr19	-	684	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGGCAGTATTCTAAA	NA	False	NA	-101	True	AATAAA	-19	NA	29339267	29326100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
Isoform_33587_3	chr19	-	794	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAATGTCCTGCTGCTT	NA	False	NA	0	True	AATAAA	-20	NA	29339276	29325999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
Isoform_33588_66	chr19	-	5057	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	22	1979	-3	9	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGATCTTTTACAAC	NA	False	NA	-8	True	AATAAA	-22	NA	29625793	29587592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
Isoform_33590_7	chr19	-	5336	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-3	320	intron_retention	FALSE	non_canonical	0	0	junction_1	89.4715348899054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGAAGATCCGGAGTAT	NA	False	NA	-6	True	AATAAA	-17	NA	29625793	29587281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_29587458_29587489_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
Isoform_33591_3	chr19	-	2035	2	FSM	ENSMUSG00000046324.13	ENSMUST00000160907.2	1902	2	-27	-106	10	106	multi-exon	FALSE	canonical	3	332	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAATATGAACAAAAAA	NA	False	NA	NA	False	CATAAA	-9	NA	29625805	29622003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29623669_29625435
Isoform_33592_6	chr19	-	2231	3	ISM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-552	39364	-70	-33044	5prime_fragment	FALSE	canonical	3	16	junction_1	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAGAAAAAGAAAAA	3850	False	NA	NA	False	ACTAAA	-10	NA	29783459	29731165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_29732418_29763648_29763850_29782681
Isoform_33600_1033	chr19	-	3763	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	3	1	3	-1	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGAATTTCCCATTTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	30152826	30075847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
Isoform_33601_204	chr19	-	3808	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	-42	1	-42	-1	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGAATTTCCCATTTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	30152871	30075847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
Isoform_33610_16	chr19	-	3239	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	4	19	-2	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	8038	False	NA	-6	True	AATAAA	-13	NA	32188394	32100131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
Isoform_33611_3	chr19	-	2023	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	-18	1257	-18	160	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATACTTTTCATATCT	8001	False	NA	NA	False	AATAAA	-19	NA	32188431	32101384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
Isoform_33612_3	chr19	-	3659	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	-1	7	-1	-4	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATGTGGCTATTATA	8330	False	NA	-8	True	AATAAA	-11	NA	32365913	32100133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
Isoform_33614_3	chr19	-	3598	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	62	5	13	-2	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	8393	False	NA	-6	True	AATAAA	-13	NA	32365850	32100131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
Isoform_33615_16	chr19	-	3367	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3449	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGCTATTATATT	4127	False	NA	-6	True	AATAAA	-13	NA	32219675	32100131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
Isoform_33619_3	chr19	-	2278	2	ISM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	35525	19	3	5prime_fragment	FALSE	canonical	3	81	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAAAAAG	8038	False	NA	NA	False	AATAGA	-36	NA	32188394	32135652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_32137764_32188227
Isoform_33623_110	chr19	-	2836	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	14	921	3	263	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGCACTGAATTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	32689717	32649958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
Isoform_33625_13	chr19	-	2874	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-24	921	-24	263	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGCACTGAATTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	32689755	32649958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
Isoform_33631_5	chr19	-	1618	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-20	-1	10	1	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTTTTATAGCCTCA	NA	False	NA	NA	False	AATAAA	-16	NA	33369685	33115145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
Isoform_33632_12	chr19	-	2757	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	76	6	76	1	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTTTTCTGTTTCTT	NA	False	NA	-7	True	NA	NA	NA	33567632	33532565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
Isoform_33633_8	chr19	-	2964	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	6	-1	6	1	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCGGTGTGGTGTTTGCT	5921	False	NA	-1	True	AATAAA	-21	NA	34504868	34469716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
Isoform_33641_3	chr19	-	3267	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	193	3954	193	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856662	34788293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_33643_12	chr19	-	3140	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	320	3954	320	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856535	34788293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_33645_3	chr19	-	3193	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	266	3955	266	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTAGTGTACATGTT	NA	False	NA	-13	True	AATAAA	-17	NA	34856589	34788294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
Isoform_33646_7	chr19	-	3415	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-45	1689	-45	-2	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	AATACA	-38	NA	37340055	37247830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_33647_13	chr19	-	3286	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-66	1839	-66	-152	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340076	37247980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
Isoform_33648_3	chr19	-	6751	54	FSM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-40	-78	8	-4	multi-exon	TRUE	canonical	3	86	junction_16	23.3368693179296	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8864	False	NA	-5	True	AATAAA	-16	NA	38031839	37887679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
Isoform_33650_5	chr19	-	920	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	18	-1	18	0	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTATGAGTTGAAGAC	5227	False	NA	-4	True	ATTAAA	-14	NA	38113258	38105076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
Isoform_33651_23	chr19	-	1393	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	10	-1	10	1	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGAGTCTTTCCTT	NA	False	NA	-6	True	AATAAA	-21	NA	38212576	38176927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_33652_15	chr19	-	1425	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-22	-1	-4	1	multi-exon	FALSE	canonical	3	295	junction_2	36.3583414649629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGAGTCTTTCCTT	NA	False	NA	-6	True	AATAAA	-21	NA	38212608	38176927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_33654_12	chr19	-	950	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	7	16060	7	2	5prime_fragment	FALSE	canonical	3	315	junction_8	31.196954979613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTTAGCATTATGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	38212579	38192988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
Isoform_33655_84	chr19	-	2940	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	30	1007	30	-1007	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTCATGGTTTTTTT	2318	False	NA	-9	True	AATAAA	-20	NA	38807651	38777578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_33657_32	chr19	-	3946	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	31	0	31	0	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2319	False	NA	NA	False	AATAAA	-17	NA	38807650	38776571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_33658_4	chr19	-	3423	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	8	546	8	-546	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCTTGTTCATTGGCT	2296	False	NA	NA	False	GATAAA	-12	NA	38807673	38777117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
Isoform_33662_132	chr19	-	1411	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	88	1072	88	118	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTGTGACCTCTTA	NA	False	NA	-24	True	AATAAA	-12	NA	40259972	40210688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
Isoform_33664_10	chr19	-	2628	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9863	False	NA	NA	False	NA	NA	NA	40502220	40283213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_33665_9	chr19	-	2601	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9860	False	NA	NA	False	NA	NA	NA	40502223	40283213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_33666_8	chr19	-	2523	23	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	16.9725105892581	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9908	False	NA	NA	False	NA	NA	NA	40502175	40283213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_33667_5	chr19	-	2535	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	9866	False	NA	NA	False	NA	NA	NA	40502217	40283213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
Isoform_33669_65	chr19	-	3444	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	83	0	2	0	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576824	40538700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
Isoform_33671_6	chr19	-	3451	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	-26	2	-11	-2	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576839	40538702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
Isoform_33672_5	chr19	-	1819	7	NIC	ENSMUSG00000025007.14	novel	2493	16	NA	NA	1	1069	intron_retention	FALSE	canonical	3	1135	junction_3	86.92461612736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40576825	40561718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
Isoform_33673_39	chr19	-	2741	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	2	0	2	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	-1	True	CATAAA	-17	NA	40600675	40584889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
Isoform_33675_3	chr19	-	547	3	NNC	ENSMUSG00000061132.14	novel	1701	17	NA	NA	58714	-7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACAGGTGTGATGCA	NA	False	NA	NA	False	AATAAA	-9	NA	40923877	40917377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_40917737_40922870_40923027_40923845
Isoform_33678_81	chr19	-	3177	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-9	2	8	-2	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTGTGACAGTAGA	NA	False	NA	-31	True	AATAAA	-13	NA	41252428	41202232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_33679_48	chr19	-	3233	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-65	2	-48	-2	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTGTGACAGTAGA	NA	False	NA	-31	True	AATAAA	-13	NA	41252484	41202232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_33681_3	chr19	-	6130	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-16	-2944	1	-4	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGATGCTTGCTTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	41252435	41199286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
Isoform_33689_8	chr19	-	5102	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	1	0	1	0	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4528	False	NA	NA	False	ATTAAA	-17	NA	41790485	41755026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
Isoform_33692_331	chr19	-	4342	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	5	-7	5	7	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTTGGCCCCTTCC	NA	False	NA	-1	True	AATAAA	-27	NA	41884607	41851282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
Isoform_33693_17	chr19	-	5222	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-25	-857	-25	857	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATGTTCTTAAGGAG	NA	False	NA	-22	True	NA	NA	NA	41884637	41850432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
Isoform_33695_3	chr19	-	2237	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-2	-1217	0	-57	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAAGTCTGTGCCACAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	41921737	41910787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_33697_132	chr19	-	1042	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-17	-7	-15	7	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATTCTTTTCATTTG	NA	False	NA	-26	True	TATAAA	-29	NA	41921752	41911997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_33700_6	chr19	-	1608	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-5	-585	-3	585	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGTTTAGTGAAAACT	NA	False	NA	-14	True	AATAAA	-16	NA	41921740	41911419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
Isoform_33703_84	chr19	-	3464	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969571	41932639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_33704_48	chr19	-	3470	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	22	3115	1	4	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969574	41932639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
Isoform_33705_32	chr19	-	1802	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-4	2	-4	-2	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTGTTATGAACT	4136	False	NA	-5	True	AATAAA	-19	NA	42074800	42063382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
Isoform_33706_10	chr19	-	1919	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4136	False	NA	-3	True	AATAAA	-21	NA	42074800	42063380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
Isoform_33707_366	chr19	-	854	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	58	132	-12	-132	multi-exon	FALSE	canonical	3	851	junction_1	12	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTCTCACCATCT	NA	False	NA	-2	True	AATAAA	-16	NA	42117440	42111843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_33708_146	chr19	-	982	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	58	4	-12	-4	multi-exon	FALSE	canonical	3	851	junction_1	12	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATTTGTCAGAGTGTG	NA	False	NA	-9	True	AATAAA	-11	NA	42117440	42111715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_33709_27	chr19	-	1051	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	-9	2	-9	-2	multi-exon	FALSE	canonical	3	851	junction_1	12	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCAGAGTGTGCT	NA	False	NA	-7	True	AATAAA	-13	NA	42117507	42111713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_33710_48	chr19	-	912	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	0	132	0	-132	multi-exon	FALSE	canonical	3	851	junction_1	12	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTCTCACCATCT	NA	False	NA	-2	True	AATAAA	-16	NA	42117498	42111843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42112288_42113186_42113466_42117309
Isoform_33713_10	chr19	-	1797	3	FSM	ENSMUSG00000018822.8	ENSMUST00000018966.8	1900	3	95	8	95	-8	multi-exon	FALSE	canonical	2	12	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTAATTTCTTTATCCA	NA	False	NA	-6	True	AATAAA	-18	NA	42190596	42186417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42187471_42188219_42188298_42189930
Isoform_33715_6	chr19	-	1205	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19154	4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGGAAAACTATATCT	2537	False	NA	-13	True	AATAAA	-21	NA	42295547	42271966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
Isoform_33717_6	chr19	-	3721	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	37	-20	-4	20	multi-exon	FALSE	canonical	1	2	junction_12	2.28124563181019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAACTGATTTTACAGC	NA	False	NA	NA	False	AATAAA	-17	NA	42601215	42582400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
Isoform_33718_5	chr19	-	3795	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	-35	-22	-35	22	multi-exon	TRUE	canonical	1	2	junction_12	2.28124563181019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACTGATTTTACAGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	42601287	42582398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
Isoform_33719_3	chr19	-	2063	16	FSM	ENSMUSG00000060224.5	ENSMUST00000076505.4	3119	16	268	788	-3	-2	multi-exon	FALSE	canonical	1	1	junction_10	3.5863940416834	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGCTTGTATTGTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	42740946	42715084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42715429_42716095_42716217_42718060_42718168_42719757_42719913_42722159_42722317_42722521_42722595_42723861_42723997_42724334_42724477_42726527_42726626_42726709_42726772_42728773_42728928_42730946_42731103_42735785_42735860_42735935_42736030_42737822_42737843_42740775
Isoform_33720_13	chr19	-	2754	20	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	28.8133740876661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768391	42743634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_33721_3	chr19	-	2821	20	NIC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	7	-24	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	28.8133740876661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATATCATGTATG	NA	False	NA	64	True	NA	NA	NA	42768391	42743567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_33722_4	chr19	-	2677	20	NIC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	30.2782113590366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTGTCCCTGGCCTT	NA	False	NA	-2	True	AATAAA	-20	NA	42768382	42743633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766678_42766992_42767086_42768352
Isoform_33724_14	chr19	-	2917	20	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	27.100714999103	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768402	42743634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
Isoform_33725_158	chr19	-	2721	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	35	91	16	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768382	42743634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_33726_8	chr19	-	2807	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	15	25	2	-25	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAATATCATGTAT	NA	False	NA	63	True	NA	NA	NA	42768402	42743568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
Isoform_33727_3	chr19	-	2821	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	430	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	29.7319511580991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCAAGCCTGTCCCTGG	NA	False	NA	-6	True	AATAAA	-16	NA	42767968	42743637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42767835
Isoform_33729_1731	chr19	-	1958	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	96	4	-24	-4	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGAGTTTGTGATCCA	8413	False	NA	-7	True	NA	NA	NA	43512948	43488194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
Isoform_33730_115	chr19	-	2022	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	34	2	34	-2	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTTTGTGATCCATT	8351	False	NA	-5	True	NA	NA	NA	43513010	43488192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
Isoform_33737_20	chr19	-	1547	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	-21	9	-21	-5	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAACGCTGTGTTGG	NA	False	NA	-12	True	ATTAAA	-10	NA	43663341	43652248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
Isoform_33738_47	chr19	-	2607	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-9	2	intron_retention	FALSE	canonical	3	293	junction_1	1	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTTGGGTTTGTC	NA	False	NA	-5	True	ATTAAA	-17	NA	43663308	43652241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_43653083_43654210_43655583_43662914
Isoform_33739_19	chr19	-	2631	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-14	0	intron_retention	FALSE	canonical	3	293	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGCTGTGTTGGGTTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	43663334	43652243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_43653083_43654210_43655583_43662914
Isoform_3374_7	chr10	+	3573	14	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-19	0	intron_retention	FALSE	canonical	2	7	junction_5	8.94824038105592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691146	80704542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_33741_270	chr19	-	2927	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	19	1852	19	-1852	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGATTTTTGTTTGGG	NA	False	NA	0	True	AATAAA	-32	NA	43741420	43723544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
Isoform_33747_8	chr19	-	2737	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1854	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	140.673743253019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGATTTTTGTTTG	NA	False	NA	-2	True	AATAAA	-30	NA	43741419	43723546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
Isoform_33748_4	chr19	-	3874	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	28	-1	28	0	multi-exon	TRUE	canonical	3	34	junction_13	13.2052526755398	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTCCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	43868179	43835259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
Isoform_33749_6	chr19	-	1337	8	ISM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	5555	2	5555	-2	3prime_fragment	FALSE	canonical	3	24	junction_2	8.50929863533453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGCCACTTGCATGC	NA	False	NA	1	True	ATTAAA	-20	NA	43969440	43944747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241
Isoform_33751_6	chr19	-	1454	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	372	2	372	-2	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGCCACTTGCATGC	6234	False	NA	1	True	ATTAAA	-20	NA	43974623	43944747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
Isoform_33752_4	chr19	-	1252	8	NNC	ENSMUSG00000025196.5	novel	1828	9	NA	NA	-7127	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	14.059639731791	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGTGCCACTTGCAT	4424	False	NA	-1	True	ATTAAA	-18	NA	43964259	43944749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43964143
Isoform_33753_7	chr19	-	3425	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	-252	-1	-3	1	multi-exon	TRUE	canonical	3	157	junction_6	17.066048165876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTATTTTCT	NA	False	NA	-1	True	AATAAA	-20	NA	44058217	44023381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
Isoform_33755_95	chr19	-	3207	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	18	3	-1	-3	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGTGTGTGTTCTATT	NA	False	NA	-5	True	AATAAA	-16	NA	44058196	44023385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
Isoform_33756_161	chr19	-	3123	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	11	2	1	-2	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTGTTCTATTT	NA	False	NA	-4	True	AATAAA	-17	NA	44058213	44023384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
Isoform_33758_4	chr19	-	2106	2	FSM	ENSMUSG00000025198.17	ENSMUST00000170577.2	2083	2	-20	-3	-8	3	multi-exon	FALSE	canonical	3	207	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	44058203	44054507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44056121_44057710
Isoform_33759_18	chr19	-	3483	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	13	6	2	-5	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095906	44061779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_3376_14	chr10	+	2836	15	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	9.35387074740632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691144	80704542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
Isoform_33760_12	chr19	-	3485	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	-9	5	-6	-5	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGAATCTCTAC	NA	False	NA	-7	True	ATTAAA	-9	NA	44095925	44061779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_33762_7	chr19	-	2034	16	FSM	ENSMUSG00000025199.17	ENSMUST00000147423.8	2337	16	-7	310	1	-310	multi-exon	FALSE	canonical	3	276	junction_3	19.8510005345379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGTAGAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	44095915	44070163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
Isoform_33763_3	chr19	-	1184	3	ISM	ENSMUSG00000025200.8	ENSMUST00000235288.2	1470	7	8249	1	-1122	-1	3prime_fragment	FALSE	canonical	3	162	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGATGTCTTATGTTGC	4910	False	NA	-4	True	AATAGA	-23	NA	44102559	44098460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_44099100_44101387_44101486_44102112
Isoform_33765_15	chr19	-	2154	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	-1	True	AATAGA	-26	NA	44124286	44098457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
Isoform_33766_43	chr19	-	2786	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	18	777	3	2	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTTCCACCTGGCCTC	NA	False	NA	-1	True	AATAAA	-22	NA	44124297	44097852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_33767_122	chr19	-	2179	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	18	1384	3	0	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGATGTCTTATGTTGCT	NA	False	NA	-3	True	AATAGA	-24	NA	44124297	44098459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_3377_18	chr10	+	3570	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	38	0	-19	0	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691146	80704542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_33772_6	chr19	-	2137	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	53.2202079340581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCTTATGTTGCTTA	NA	False	NA	-1	True	AATAGA	-26	NA	44124297	44098457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
Isoform_33773_4	chr19	-	2145	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	40.9509737188349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGATGTCTTATGTTGC	NA	False	NA	-4	True	AATAGA	-23	NA	44124292	44098460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
Isoform_33774_558	chr19	-	852	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	22	11	6	-11	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAGGAAAACAAAA	985	False	NA	NA	False	NA	NA	NA	44134863	44127708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
Isoform_33776_6	chr19	-	996	5	NNC	ENSMUSG00000057506.6	novel	885	5	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_4	525.743758878791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAGGAAAACAAAA	986	False	NA	NA	False	NA	NA	NA	44134862	44127708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134652
Isoform_33779_16	chr19	-	765	3	ISM	ENSMUSG00000057506.6	ENSMUST00000237867.2	683	5	-44	850	0	-850	5prime_fragment	FALSE	canonical	3	1199	junction_2	45	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	966	False	NA	NA	False	NA	NA	NA	44134882	44131016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_44131580_44134379_44134497_44134797
Isoform_3378_5	chr10	+	4061	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	42	-495	-15	495	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80691150	80705037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
Isoform_33780_17	chr19	-	2331	11	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	36462	6	36462	-5	3prime_fragment	FALSE	canonical	3	31	junction_9	13.2003787824441	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	2021	False	NA	-7	True	AATAAA	-11	NA	44144419	44136081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279
Isoform_33781_17	chr19	-	2526	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	35281	6	35281	-5	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	840	False	NA	-7	True	AATAAA	-11	NA	44145600	44136081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_33782_8	chr19	-	2788	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35303	-5	intron_retention	FALSE	canonical	3	31	junction_8	12.458330546265	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	862	False	NA	-7	True	AATAAA	-11	NA	44145578	44136081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_33783_3	chr19	-	2959	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35310	-5	intron_retention	FALSE	canonical	3	31	junction_7	13.1242871646519	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACGTCTTTGCATTTC	869	False	NA	-7	True	AATAAA	-11	NA	44145571	44136081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145490
Isoform_33784_3	chr19	-	3819	9	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35302	-6	intron_retention	FALSE	canonical	3	43	junction_4	11.6189500386223	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACGTCTTTGCATTT	861	False	NA	-8	True	AATAAA	-10	NA	44145579	44136082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44144116_44144279_44144505_44145490
Isoform_3379_52	chr10	+	2829	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	38	2	-19	2	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCTCCTGTCCTGTG	NA	False	NA	9	True	ATTAAA	-17	NA	80691146	80704540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
Isoform_33790_95	chr19	-	4831	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	1	0	1	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	-3	True	NA	-5	True	AATAAA	-22	NA	44396147	44382893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
Isoform_33793_10	chr19	-	4980	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-149	1	21	-1	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGAGCTTTTGTGTGTGG	7291	False	NA	-6	True	AATAAA	-21	NA	44396297	44382894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
Isoform_33798_4	chr19	-	4904	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2691	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	9761	False	NA	-5	True	AATAAA	-22	NA	44399009	44382893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
Isoform_3380_98	chr10	+	803	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	480	1	-35	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCATCCCCCAGAACAAT	249	False	NA	15	True	AATAAA	-18	NA	80765907	80767558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
Isoform_33802_26	chr19	-	597	5	FSM	ENSMUSG00000025204.11	ENSMUST00000168083.2	603	5	8	-2	-6	2	multi-exon	FALSE	canonical	3	85	junction_4	2211.89753096747	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	2003	False	NA	-18	True	AATAAA	-18	NA	44543850	44538689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543454_44543755
Isoform_33803_2197	chr19	-	655	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	14	11	0	2	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGGTTTCTGTGTCT	1988	False	NA	-18	True	AATAAA	-18	NA	44543865	44538689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
Isoform_33808_27	chr19	-	1257	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	20	121	-2	-121	multi-exon	FALSE	canonical	3	460	junction_1	27.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44994861	44993388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44994380_44994501_44994609_44994702
Isoform_3381_4	chr10	+	1282	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	1	1	-1	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCTCGTTGTATTTT	249	False	NA	4	True	AATAAA	-13	NA	80765907	80768037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
Isoform_33812_11	chr19	-	4115	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-924	-1	intron_retention	TRUE	canonical	2	6	junction_9	4.93987284755387	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45035080	45015345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
Isoform_33814_4	chr19	-	2494	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1002	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACCGCGATCGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	45225253	45221125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45222697_45223341_45224081_45225069
Isoform_33815_4	chr19	-	2557	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1060	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCGATCGCATTTGCGA	NA	False	NA	NA	False	AATAAA	-24	NA	45225311	45221120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45222697_45223341_45224081_45225069
Isoform_33818_66	chr19	-	2339	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	-17	2	-17	-2	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548987	45540715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_33819_3	chr19	-	2552	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	20.4435197556585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548912	45540716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548635
Isoform_3382_1618	chr10	+	2460	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	33	339	33	-339	multi-exon	FALSE	canonical	3	459	junction_3	51.2387521532504	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5483	False	NA	10	True	ATTAAA	-16	NA	80905901	80918054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
Isoform_33820_4	chr19	-	3002	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	21	-3	intron_retention	FALSE	canonical	3	33	junction_7	12.7775312999988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548949	45540716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45541610_45541947_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_33821_11	chr19	-	2677	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	33	junction_7	11.0176111340908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548987	45540715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_33822_11	chr19	-	2638	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	22	-2	intron_retention	FALSE	canonical	3	33	junction_7	11.0176111340908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCTGTCTGTGAG	NA	False	NA	0	True	AATAAA	-17	NA	45548948	45540715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_33823_4	chr19	-	3338	7	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	21	-5	intron_retention	FALSE	canonical	3	33	junction_6	11.8988794990677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATTGCCTGCTGTCTGT	NA	False	NA	-3	True	AATAAA	-14	NA	45548949	45540718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_33824_11	chr19	-	2171	9	NIC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-160	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	23.8275051148877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTCTTTGGTGGTT	NA	False	NA	-7	True	AATAAA	-16	NA	45648911	45566694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45567365_45567559_45567647_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
Isoform_33825_77	chr19	-	2238	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	-172	2	-172	-2	multi-exon	FALSE	canonical	3	63	junction_8	9.07520660921833	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTCTTTGGTGGTT	NA	False	NA	-7	True	AATAAA	-16	NA	45648923	45566694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
Isoform_33831_34	chr19	-	1156	5	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	27	1	-15	-1	intron_retention	FALSE	canonical	3	216	junction_3	14.3614066163451	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTGGCTTTTTCA	4914	False	NA	-1	True	AATAAA	-26	NA	45738003	45736173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495
Isoform_33834_1043	chr19	-	860	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	27	1	-15	-1	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTGGCTTTTTCA	4914	False	NA	-1	True	AATAAA	-26	NA	45738003	45736173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
Isoform_33837_129	chr19	-	5047	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	9	1	9	-1	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGCTGTGCTGCTTTT	5485	False	NA	-13	True	AATAAA	-12	NA	45771981	45738698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
Isoform_33838_153	chr19	-	3469	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	9	1579	9	-8	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCATCCAGTGTGGT	5485	False	NA	-8	True	AATAAA	-15	NA	45771981	45740276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
Isoform_3384_22	chr10	+	2486	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	7	339	7	-339	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5457	False	NA	10	True	ATTAAA	-16	NA	80905875	80918054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
Isoform_33847_5	chr19	-	2299	7	ISM	ENSMUSG00000025221.17	ENSMUST00000239049.2	2113	8	7482	3	-388	-3	3prime_fragment	TRUE	canonical	3	16	junction_1	4.2687494916219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45784531	45780787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018
Isoform_33848_10	chr19	-	2014	8	FSM	ENSMUSG00000025221.17	ENSMUST00000086993.11	1005	8	-9	-1000	-9	-3	multi-exon	FALSE	canonical	3	6	junction_7	6.66394502268034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45800739	45780787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
Isoform_33849_3	chr19	-	2302	7	NIC	ENSMUSG00000025221.17	novel	1005	8	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	6	junction_6	7.06320670013903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45800744	45780787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
Isoform_33851_39	chr19	-	3736	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-60	0	-60	0	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6587	False	NA	-3	True	ATTAAA	-17	NA	45986987	45805802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_33853_4	chr19	-	3009	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-109	776	-109	-776	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGCCTACTTTGCTG	6538	False	NA	-2	True	AATAAA	-24	NA	45987036	45806578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_33854_11	chr19	-	3796	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4917	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_25	35.5729335309867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	-3	True	ATTAAA	-17	NA	45982010	45805802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
Isoform_33855_3	chr19	-	3581	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	40.9002003526742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6634	False	NA	-3	True	ATTAAA	-17	NA	45986940	45805802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45963405_45963553_45963657_45963715_45967038_45967152_45986854
Isoform_33857_39	chr19	-	2274	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	8	13	8	9	multi-exon	TRUE	canonical	3	31	junction_10	244.379806858095	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8096	False	NA	-44	True	ATTAAA	-7	NA	46028052	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_33859_319	chr19	-	2118	11	FSM	ENSMUSG00000025223.16	ENSMUST00000185355.7	2088	11	-21	-9	-18	9	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6700	False	NA	-44	True	ATTAAA	-7	NA	46033671	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_33862_13	chr19	-	2273	11	NIC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	267.114750622275	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8091	False	NA	-44	True	ATTAAA	-7	NA	46028057	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_33864_81	chr19	-	2113	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	-19	14	-19	9	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6699	False	NA	-44	True	ATTAAA	-7	NA	46033672	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_33867_14	chr19	-	2967	10	FSM	ENSMUSG00000025223.16	ENSMUST00000137771.2	2014	10	-135	-818	5	9	multi-exon	FALSE	canonical	3	31	junction_9	235.530344562811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	8093	False	NA	-44	True	ATTAAA	-7	NA	46028055	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
Isoform_33869_191	chr19	-	2688	10	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	98	9	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAGTCACT	6820	False	NA	-44	True	ATTAAA	-7	NA	46033551	46021045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
Isoform_33874_7	chr19	-	1193	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	390.981102129275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCATTCTGCTCAT	5832	False	NA	-4	True	AGTAAA	-17	NA	46327089	46318980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
Isoform_33876_24	chr19	-	1041	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	-36	-6	7	0	multi-exon	FALSE	canonical	3	133	junction_8	339.490035752156	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
Isoform_33880_15	chr19	-	1138	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	122	junction_9	349.700542086801	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5829	False	NA	-7	True	AGTAAA	-14	NA	46327092	46318983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
Isoform_33882_18	chr19	-	1168	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	349.486642921081	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5862	False	NA	-2	True	AGTAAA	-19	NA	46327059	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
Isoform_33883_7	chr19	-	1152	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	365.48266750547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
Isoform_33884_14	chr19	-	1185	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	356.842566524722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5855	False	NA	-2	True	AGTAAA	-19	NA	46327066	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
Isoform_33887_32	chr19	-	1044	9	NIC	ENSMUSG00000036748.17	novel	1050	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	390	junction_8	277.077155319597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_33893_13	chr19	-	1060	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	-15	5	7	-1	multi-exon	FALSE	canonical	3	87	junction_5	355.205486303351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5829	False	NA	-7	True	AGTAAA	-14	NA	46327092	46318983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_33895_9	chr19	-	1351	9	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	140	junction_8	319.964036064993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751
Isoform_33896_7	chr19	-	1191	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	122	junction_9	380.63750942366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5826	False	NA	-8	True	AGTAAA	-13	NA	46327095	46318984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326851_46327007
Isoform_33897_13	chr19	-	1251	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	380.445937172565	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5830	False	NA	-2	True	AGTAAA	-19	NA	46327091	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
Isoform_33899_8	chr19	-	1233	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	89	junction_9	387.049363617282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCATTCTGCTCAT	5856	False	NA	-4	True	AGTAAA	-17	NA	46327065	46318980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326870_46326958
Isoform_33901_29	chr19	-	1089	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	-27	728	-9	0	multi-exon	FALSE	canonical	3	133	junction_8	321.93700859019	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5835	False	NA	-2	True	AGTAAA	-19	NA	46327086	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46327007
Isoform_33902_21	chr19	-	1354	9	ISM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-29	-4	7	0	intron_retention	FALSE	canonical	3	415	junction_8	247.19526694498	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
Isoform_33907_37	chr19	-	1192	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-29	1	7	-1	multi-exon	FALSE	canonical	3	122	junction_9	336.647010794011	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	5829	False	NA	-7	True	AGTAAA	-14	NA	46327092	46318983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
Isoform_33908_48	chr19	-	1222	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	336.420298561116	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5862	False	NA	-2	True	AGTAAA	-19	NA	46327059	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
Isoform_33910_7	chr19	-	1194	10	FSM	ENSMUSG00000036748.17	ENSMUST00000167861.8	1941	10	13	734	-9	0	multi-exon	FALSE	canonical	3	50	junction_9	353.322781114268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5835	False	NA	-8	True	AGTAAA	-13	NA	46327086	46318984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
Isoform_33911_43	chr19	-	1232	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	344.205723727706	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5862	False	NA	-2	True	AGTAAA	-19	NA	46327059	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
Isoform_33912_8	chr19	-	1180	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	-12	-1	0	1	multi-exon	FALSE	canonical	3	29	junction_9	358.309542707226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGCTCATTCTGCTCA	5862	False	NA	-5	True	AGTAAA	-16	NA	46327059	46318981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
Isoform_33913_124	chr19	-	1082	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	23	728	1	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5845	False	NA	-2	True	AGTAAA	-19	NA	46327076	46318978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_33914_7	chr19	-	1150	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	-50	733	-8	-1	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATATGCTCATTCTGCT	-12	True	NA	-7	True	AGTAAA	-14	NA	46327149	46318983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
Isoform_33915_602	chr19	-	2744	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	9	4	0	-1	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAGTCTGACCTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	46384177	46365253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
Isoform_33919_207	chr19	-	932	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-100	11	5	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGAAATAGTATTAAAT	NA	False	NA	-32	True	AATAAA	-24	NA	46561632	46519545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
Isoform_3392_70	chr10	+	1553	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	32	820	0	-6	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTAGCTGCGGCTGTGCT	1132	False	NA	7	True	NA	NA	NA	80941780	80959711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_33921_31	chr19	-	1904	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	1824	0	355	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTATCTGTTCTCT	7192	False	NA	-16	True	TTTAAA	-24	NA	46950747	46877091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_33922_18	chr19	-	1930	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-28	1826	-28	353	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTATCTGTTCT	7164	False	NA	-18	True	TTTAAA	-22	NA	46950775	46877093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_33923_3	chr19	-	2730	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	998	0	1	multi-exon	TRUE	canonical	3	118	junction_5	15.8666589126981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCCCTTGTGTAGTA	7192	False	NA	NA	False	AGTAAA	-18	NA	46950747	46876265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_33924_3	chr19	-	2009	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-19	1738	-19	441	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTGTAATGATTTTC	7173	False	NA	70	True	NA	NA	NA	46950766	46877005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
Isoform_33926_3	chr19	-	2054	18	NIC	ENSMUSG00000025041.18	novel	7353	18	NA	NA	-53	350	combination_of_known_junctions	FALSE	canonical	1	5	junction_17	36.1371857478087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTGTATCTGT	6905	False	NA	-21	True	TTTAAA	-19	NA	46951034	46877096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950842
Isoform_33927_25	chr19	-	2341	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-18	825	-18	355	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTATCTGTTCTCT	NA	False	NA	-16	True	TTTAAA	-24	NA	47003610	46877091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
Isoform_33928_12	chr19	-	2181	11	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	203.669830853762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039348	47022056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_47023125_47025676_47025764_47028482_47028582_47030560_47030579_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_33931_390	chr19	-	2146	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	12	1	-2	1	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039331	47022056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_33932_13	chr19	-	2204	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	-46	1	-44	1	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039389	47022056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_33934_60	chr19	-	2142	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	147.016585945974	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGTGTGTTGACAT	NA	False	NA	-20	True	AATAAA	-16	NA	47039331	47022056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_47023125_47025676_47025760_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
Isoform_33938_621	chr19	-	367	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-4	-1	0	1	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTGTCTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	47079086	47071905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
Isoform_33939_80	chr19	-	401	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-38	-1	-34	1	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTGTCTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	47079120	47071905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
Isoform_33942_7	chr19	-	2197	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-156	417	-156	-417	multi-exon	FALSE	canonical	2	8	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCCTAGACAGGGTAT	5173	False	NA	-9	True	GATAAA	-14	NA	47126889	47120678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_33943_5	chr19	-	2279	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-238	417	-238	-417	multi-exon	FALSE	canonical	2	8	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCCTAGACAGGGTAT	5091	False	NA	-9	True	GATAAA	-14	NA	47126971	47120678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_33944_4	chr19	-	2705	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-656	409	-656	-409	multi-exon	FALSE	canonical	2	8	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGGGTATTTGTGCAA	4673	False	NA	-1	True	GATAAA	-22	NA	47127389	47120670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_33946_3	chr19	-	2879	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-830	409	-830	-409	multi-exon	FALSE	canonical	2	8	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGGGTATTTGTGCAA	4499	False	NA	-1	True	GATAAA	-22	NA	47127563	47120670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47121613_47123787_47124505_47126343
Isoform_33948_3	chr19	-	1065	6	NIC	ENSMUSG00000053617.13	novel	799	5	NA	NA	3	8	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	1.83303027798234	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTCCTGTGTTCCTG	7925	False	NA	NA	False	AAGAAA	-21	NA	47452837	47352039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_47352444_47353061_47353154_47361822_47361900_47386254_47386331_47412928_47413010_47452502
Isoform_33949_74	chr19	-	1962	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	16	14	-9	-9	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGGCATTTCAATTCA	NA	False	NA	-24	True	AATAAA	-13	NA	47525542	47489485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
Isoform_33951_5	chr19	-	1974	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	-116	-1300	14	1300	multi-exon	TRUE	canonical	1	2	junction_1	57.4429064376099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGGATGTTACATT	NA	False	NA	NA	False	AATAAA	-13	NA	47525519	47509270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
Isoform_33952_4	chr19	-	2090	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-54	-1346	-6	1346	multi-exon	FALSE	canonical	3	136	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47525539	47523007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47524811_47525252
Isoform_33953_5	chr19	-	780	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-44	-46	4	46	multi-exon	FALSE	canonical	3	136	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACATGTGCTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	47525529	47524307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47524811_47525252
Isoform_33954_3	chr19	-	3760	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	2	-2	2	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGTAGAGTTTGCTT	6776	False	NA	NA	False	ATTAAA	-18	NA	47907736	47883038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_47886625_47907562
Isoform_33955_4	chr19	-	3838	2	NIC	ENSMUSG00000117975.2	novel	351	3	NA	NA	-72	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGGAGTAGAGTTTGCT	6702	False	NA	NA	False	ATTAAA	-17	NA	47907810	47883039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_47886630_47907562
Isoform_33967_1011	chr19	-	2505	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1573	0	0	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5059	False	NA	-3	True	AATAAA	-14	NA	53027072	52979613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
Isoform_33968_94	chr19	-	2536	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1542	0	-31	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5028	False	NA	-3	True	AATAAA	-14	NA	53027103	52979613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
Isoform_33969_1416	chr19	-	2348	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5127	False	NA	-3	True	AATAAA	-14	NA	53027004	52979613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
Isoform_3397_152	chr10	+	1550	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	0	6	0	-6	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTAGCTGCGGCTGTGCT	1132	False	NA	7	True	NA	NA	NA	80941780	80959711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_33976_6	chr19	-	2129	7	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	104.802459682755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGTTAACAAAGGG	NA	False	NA	-6	True	AATAAA	-19	NA	53379004	53367824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53374803_53374988_53377733_53377854_53378846
Isoform_33977_46	chr19	-	1976	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-31	3	-31	-3	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379040	53367829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_33978_7	chr19	-	2064	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-119	3	-119	-3	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379128	53367829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_3398_12	chr10	+	2015	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	0	-459	0	-355	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGAGTGTCTGCACCT	1132	False	NA	33	True	AATACA	-27	NA	80941780	80960176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
Isoform_33980_9	chr19	-	2194	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-36	-210	-36	204	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGAGGTAAACTCTTC	NA	False	NA	NA	False	ATTAAA	-44	NA	53379045	53367616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_33983_16	chr19	-	1506	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-58	500	-58	-16	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAACAAACCATGT	NA	False	NA	-25	True	NA	NA	NA	53379067	53368326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_33986_7	chr19	-	1957	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	1	-480	1	-3	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCCAGTGTGTTAACA	NA	False	NA	-11	True	AATAAA	-14	NA	53379004	53367829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
Isoform_33988_68	chr19	-	581	4	ISM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	5	4163	1	908	5prime_fragment	FALSE	canonical	3	184	junction_2	11.8133634311129	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTGACGCTTCCCAG	NA	False	NA	0	True	NA	NA	NA	53379004	53371989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_33989_16	chr19	-	644	4	ISM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-58	4163	-58	908	5prime_fragment	FALSE	canonical	3	184	junction_2	11.8133634311129	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTGACGCTTCCCAG	NA	False	NA	0	True	NA	NA	NA	53379067	53371989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_53372150_53372884_53373028_53377733_53377854_53378846
Isoform_33991_3	chr19	-	572	4	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-20	908	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	90.6617645733611	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTGACGCTTCCCAG	NA	False	NA	0	True	NA	NA	NA	53378740	53371989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_53372150_53372884_53373028_53377733_53377854_53378591
Isoform_33992_7	chr19	-	631	4	ISM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-35	3683	-31	905	5prime_fragment	FALSE	canonical	3	22	junction_1	82.6075057122535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGAGTGACGCTTCC	NA	False	NA	-3	True	NA	NA	NA	53379040	53371992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_53372167_53372884_53373028_53377733_53377854_53378846
Isoform_33993_3	chr19	-	848	3	ISM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-25	4174	-21	414	5prime_fragment	FALSE	canonical	3	184	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53379030	53372483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_53373028_53377733_53377854_53378846
Isoform_33995_11	chr19	-	744	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	5	-87	5	-3	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATATTGTTGGGCTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	53932654	53919447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
Isoform_33996_25	chr19	-	735	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	156	1152	3	1	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGGGCTTGTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	53932902	53919443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
Isoform_33997_7	chr19	-	860	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	27	1156	19	-3	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATATTGTTGGGCTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	53933031	53919447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
Isoform_33999_19	chr19	-	2954	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-28	906	-28	1	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAGGCTAGTTACTG	8975	False	NA	NA	False	ATTAAA	-20	NA	55087911	55059071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
Isoform_34_52	ERCC-00025	+	1976	1	FSM	ERCC-00025A	DQ883689	1978	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00025_+_0_2000
Isoform_34000_8	chr19	-	5921	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-4	-2085	-4	-13	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCCGACTGATT	8999	False	NA	-13	True	AATAAA	-6	NA	55087887	55056080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
Isoform_34001_45	chr19	-	2257	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	4	2	0	-2	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATTATAGTTTTCAC	7445	False	NA	-28	True	AATAAA	-17	NA	55304458	55286753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
Isoform_34003_530	chr19	-	2163	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	6	-1	0	1	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGTTTTTAGTTT	7445	False	NA	-6	True	AATAAA	-39	NA	55304458	55286731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
Isoform_34007_7	chr19	-	2426	11	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	162.400615762379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATAGTTTTCACCAA	7442	False	NA	-25	True	AATAAA	-20	NA	55304461	55286750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303948
Isoform_34010_15	chr19	-	4097	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	20	-8	20	6	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGATGGGTTTCATTA	8185	False	NA	-2	True	AATAAA	-26	NA	56536464	56517592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
Isoform_34011_5	chr19	-	4275	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-168	2	23	-2	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAGCATATTTGGATG	7997	False	NA	-12	True	AATAAA	-16	NA	56536652	56517602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
Isoform_34013_3	chr19	-	2650	14	ISM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-9	5833	-9	-352	5prime_fragment	TRUE	canonical	3	43	junction_2	9.1554620422511	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAGAAAAAAAACCAAGT	5188	False	NA	NA	False	AATAGA	-37	NA	56810631	56781745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_34014_5	chr19	-	1505	6	ISM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-17	19484	-17	-6926	5prime_fragment	FALSE	canonical	3	51	junction_3	2.03960780543711	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCGGCCATGCTGTGG	5180	False	NA	NA	False	AGTAAA	-45	NA	56810639	56795396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
Isoform_34015_9	chr19	-	1045	3	ISM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-20	22758	-20	-10200	5prime_fragment	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACCAGGTCTGCCAC	5177	False	NA	NA	False	AATAAA	-5	NA	56810642	56798670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_56798798_56801426_56802122_56810419
Isoform_34016_44	chr19	-	909	2	ISM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-9	25512	-9	-12954	5prime_fragment	FALSE	canonical	3	53	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGCTGCTACGGCCCC	5188	False	NA	NA	False	NA	NA	NA	56810631	56801424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_56802122_56810419
Isoform_34017_3	chr19	-	3938	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	-405	-2	-375	2	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGTTTCCCTTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	56997035	56900790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
Isoform_34018_22	chr19	-	3875	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	10	1361	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.9193931188232	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	57107429	57023353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_34019_9	chr19	-	3902	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	0	1361	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.9193931188232	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	57107456	57023353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_34020_6	chr19	-	3874	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	17	1361	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	24.5351448606552	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	57107422	57023353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
Isoform_34023_7	chr19	-	4677	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-21	1326	-21	-1326	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTCTTGTGGCCTT	NA	False	NA	0	True	NA	NA	NA	59334233	59286935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_34025_3	chr19	-	2021	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	0	7410	0	-7410	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGTGTATATACATAAT	NA	False	NA	NA	False	AATAAA	-20	NA	59334212	59293019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
Isoform_34026_8	chr19	-	1721	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	-1	315	-1	-2	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTGTGTGTGTGT	9772	False	NA	NA	False	AGTAAA	-12	NA	60215130	60187332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
Isoform_34027_17	chr19	-	1637	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-3	1	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9781	False	NA	NA	False	AGTAAA	-15	NA	60215121	60187329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
Isoform_34039_5	chr19	-	5698	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	86	8	16	-8	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGTTCCTGGGTTTGA	6432	False	NA	-7	True	AATAAA	-41	NA	60569377	60513141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_3404_50	chr10	+	1881	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-39	-1	-39	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972343	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_34041_22	chr19	-	3194	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	94	2504	24	128	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGTTGTGTTAGTAAA	6440	False	NA	-2	True	AATAAA	-15	NA	60569369	60515637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_34043_15	chr19	-	3526	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	72	2194	2	438	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTCCTGAAAGTA	6418	False	NA	-4	True	AATAAA	-16	NA	60569391	60515327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_34046_8	chr19	-	3578	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	19	2195	19	437	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTATTTCCTGAAAGT	6365	False	NA	-5	True	AATAAA	-15	NA	60569444	60515328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_34047_8	chr19	-	1722	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	24	4046	24	299	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTTTTTGTTTTGTT	6370	False	NA	-23	True	AATACA	-8	NA	60569439	60517179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_34052_3	chr19	-	5749	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	7	36	7	-36	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAACTTGCTTTTTA	6353	False	NA	-35	True	AATAAA	-13	NA	60569456	60513169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_34053_4	chr19	-	2980	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	40	-1715	22	2	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGTTAGTGGTTCCGTG	6438	False	NA	NA	False	AGTAAA	-23	NA	60569371	60515763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
Isoform_3406_17	chr10	+	2017	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-175	-1	103	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972207	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_34062_4	chr19	-	2350	5	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	4486	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	625.228358281996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTCAATGGTGCTA	8097	False	NA	-26	True	AATAAA	-22	NA	60756103	60749549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756010
Isoform_34066_13	chr19	-	5184	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-59	0	-44	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8695	False	NA	-31	True	AATAAA	-17	NA	60779140	60749554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
Isoform_3407_9	chr10	+	2192	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-350	-1	-72	1	multi-exon	FALSE	canonical	3	10	junction_1	36.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972032	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80972494_80979795_80981052_80983803
Isoform_34070_20	chr19	-	2726	17	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-3	7652	-3	2017	5prime_fragment	FALSE	canonical	0	0	junction_12	330.648699528669	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGGGAAAGGCGCAGAG	8751	False	NA	19	True	AAAAAG	-24	NA	60779084	60757206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_-_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
Isoform_34086_4	chr19	-	1290	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	13	6	13	4	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCATCAAAAGGTAT	NA	False	NA	NA	False	AATAAA	-24	NA	60849904	60827191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
Isoform_34087_6	chr19	-	1216	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	83	10	28	0	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAATCATCAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	60849834	60827195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
Isoform_34088_3	chr19	-	1134	13	NIC	ENSMUSG00000063698.10	novel	1309	14	NA	NA	36	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	6.73094016876956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAATCATCAAAAGG	NA	False	NA	NA	False	AATAAA	-21	NA	60849826	60827194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60848466_60848533_60849736
Isoform_34091_798	chr19	-	1432	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	24	22	24	-22	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTGCGTTTTTGACT	1471	False	NA	-23	True	AATAAA	-12	NA	60862970	60852510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
Isoform_34094_6	chr19	-	1467	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTTTCTTGTAATT	5178	False	NA	NA	False	AATAAA	-31	NA	53052911	53039144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_53040340_53050500_53050648_53052786
Isoform_34095_3	chr19	-	1412	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCTTTCTTGTA	5178	False	NA	NA	False	AATAAA	-28	NA	53052911	53039147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_53040340_53050500_53050648_53052838
Isoform_34096_7	chr19	-	2495	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2113829314077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAATTGCCTGCTGTCTG	NA	False	NA	-4	True	AATAAA	-13	NA	45548994	45540719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_45541763_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
Isoform_34097_5	chr19	-	425	3	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTGTCAGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	61301944	61286917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_61287117_61287295_61287423_61301845
Isoform_34098_3	chr19	-	2408	15	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.1944351571976	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTAAGTCTTCCAGCC	NA	False	NA	-5	True	GATAAA	-21	NA	42420224	42271479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_-_42271914_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
Isoform_34102_571	chr19	+	794	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	4	4	0	2	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCTGTGACTTGCTGT	7375	False	NA	9	True	NA	NA	NA	3333063	3341197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
Isoform_34107_59	chr19	+	4314	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	3	0	3	0	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373287	3435733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
Isoform_34108_86	chr19	+	4256	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	63	-2	0	2	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGTCCCTGTCTCCCT	NA	False	NA	20	True	AATAAA	-22	NA	3373347	3435735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
Isoform_3411_41	chr10	+	1844	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	316	3778	9	1	multi-exon	FALSE	canonical	3	9	junction_1	37	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972420	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80972534_80979795_80981052_80983803
Isoform_34113_8	chr19	+	2189	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	7	38	7	0	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTTAGTAGCTGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	3438863	3457785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
Isoform_34114_14	chr19	+	1754	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	36	444	8	90	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTGTTATGTGTTTG	NA	False	NA	NA	False	CATAAA	-16	NA	3438892	3457379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
Isoform_34115_35	chr19	+	1913	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-32	1	8	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758300	3767880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
Isoform_34116_15	chr19	+	1911	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237320.2	772	4	7	-1146	7	0	multi-exon	FALSE	canonical	3	113	junction_1	87.4541149530554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758299	3767880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3758437_3764406_3764626_3765637_3765803_3766490
Isoform_34118_6	chr19	+	916	6	ISM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	39	2160	8	-524	5prime_fragment	FALSE	canonical	3	249	junction_4	23.5592869162036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTATTACACTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	3818156	3852897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787
Isoform_34119_4	chr19	+	2565	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	-17	-1265	-17	-2	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAAGTGTCAGAGCCA	NA	False	NA	-2	True	NA	NA	NA	3818100	3856322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_3412_16	chr10	+	1875	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	285	3778	7	1	multi-exon	FALSE	canonical	3	9	junction_1	37	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80972389	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80972534_80979795_80981052_80983803
Isoform_34121_4	chr19	+	1659	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	31	-407	0	1	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAGAATTGACCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	3818148	3855464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
Isoform_34123_5	chr19	+	2834	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	137	4	1	2	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGTTTTCTTGAGT	NA	False	NA	52	True	AATAAA	-11	NA	3818169	3858831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
Isoform_34124_3	chr19	+	2968	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	707	775	-6	-775	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAAATCCCGCCAC	NA	False	NA	NA	False	NA	NA	NA	3818127	3865616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
Isoform_34127_7	chr19	+	1865	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	-56	1796	3	-1796	multi-exon	FALSE	canonical	3	158	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGTGTCCT	5723	False	NA	NA	False	TTTAAA	-14	NA	3901775	3915874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647
Isoform_34128_7	chr19	+	1808	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	1	1796	1	-1796	multi-exon	FALSE	canonical	3	158	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGTGTCCT	5780	False	NA	NA	False	TTTAAA	-14	NA	3901832	3915874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647
Isoform_34129_9	chr19	+	2806	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.1151794212838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5723	False	NA	4	True	AATAAA	-15	NA	3901775	3944367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3931997_3932122_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34130_11	chr19	+	2651	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	32	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	5752	False	NA	2	True	AATAAA	-13	NA	3901804	3944365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34131_10	chr19	+	2689	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	-5	-1	-5	1	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	5715	False	NA	3	True	AATAAA	-14	NA	3901767	3944366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34136_197	chr19	+	2566	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-244	-3	0	0	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5779	False	NA	4	True	AATAAA	-15	NA	3901831	3944367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34137_88	chr19	+	2602	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-279	-4	0	1	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5744	False	NA	5	True	AATAAA	-16	NA	3901796	3944368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_3414_212	chr10	+	1859	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-10	14	-10	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973776	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_34142_137	chr19	+	2538	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	8	3	-5	1	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	5752	False	NA	3	True	AATAAA	-14	NA	3901804	3944366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34143_10	chr19	+	1787	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	-31	793	-7	-81	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTTTACACTCTCAC	5713	False	NA	7	True	ATTAAA	-20	NA	3901765	3943576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
Isoform_34149_27	chr19	+	2230	11	FSM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	36	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_5	6.90579466824782	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	5221	False	NA	NA	False	AATAAA	-20	NA	3985221	3999340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_3415_19	chr10	+	2177	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-328	14	-328	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973458	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_34150_9	chr19	+	2105	10	NIC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	7.99691298464293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGTGTAGGTTGTGTT	5182	False	NA	NA	False	AATAAA	-18	NA	3985182	3999338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_3985353_3985761_3985904_3986268_3986423_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
Isoform_34151_4	chr19	+	1344	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	-61	1	-61	-1	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACAGTTCTTGTTCT	NA	False	NA	2	True	TATAAA	-16	NA	4036508	4040004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
Isoform_34152_9	chr19	+	1275	8	NIC	ENSMUSG00000024866.11	novel	1284	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	12.795088343356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACAGTTCTTGTTCT	NA	False	NA	2	True	TATAAA	-16	NA	4036572	4040004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4036612_4036827_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
Isoform_34153_44	chr19	+	773	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	12	2	12	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTGGCATCTTCCGT	3525	False	NA	7	True	ATTAAA	-16	NA	4050591	4052101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
Isoform_34154_3	chr19	+	1304	2	ISM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-3	-1	-2	1	intron_retention	FALSE	canonical	3	655	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7093	False	NA	28	True	AATAAA	-17	NA	4147398	4149011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_4147508_4147816
Isoform_34155_17	chr19	+	907	4	FSM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-55	-9	-54	0	multi-exon	FALSE	canonical	3	61	junction_2	272.140078309356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7041	False	NA	36	True	AATAAA	-25	NA	4147346	4149019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
Isoform_34157_205	chr19	+	905	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	169	6	-50	1	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7045	False	NA	28	True	AATAAA	-17	NA	4147350	4149011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
Isoform_34158_11	chr19	+	1363	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	-288	5	-288	2	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGCCTTTCTGTGTG	6588	False	NA	29	True	AATAAA	-18	NA	4146893	4149012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
Isoform_34161_8	chr19	+	1144	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	-54	-1	-54	1	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTGTGTGTGGTTCCT	7041	False	NA	37	True	AATAAA	-26	NA	4147346	4149020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
Isoform_34162_16	chr19	+	1072	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	9	8	8	1	multi-exon	FALSE	canonical	3	90	junction_1	272.960721635102	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7104	False	NA	28	True	AATAAA	-17	NA	4147409	4149011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
Isoform_34163_4	chr19	+	4175	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	32	-1	-16	1	multi-exon	FALSE	canonical	1	1	junction_9	2.52323793539946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCCTTCCTGTCTGGG	1339	False	NA	NA	False	AATAAA	-15	NA	4150029	4163966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
Isoform_34164_99	chr19	+	928	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	14	-4	-2	-1	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4384	False	NA	NA	False	AATAAA	-20	NA	4175972	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_34165_23	chr19	+	888	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	8	576	-7	-1	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4379	False	NA	NA	False	AATAAA	-20	NA	4175967	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
Isoform_34166_15	chr19	+	1048	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	13	554	-2	-1	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4384	False	NA	NA	False	AATAAA	-20	NA	4175972	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_34167_7	chr19	+	1013	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	4	-5	3	-1	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4374	False	NA	NA	False	AATAAA	-20	NA	4175962	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
Isoform_34168_3	chr19	+	1500	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	-26	-537	-6	-13	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAAATAAACAAA	4364	False	NA	NA	False	NA	NA	NA	4175952	4182271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_34169_33	chr19	+	942	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	-9	4	-5	-1	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4381	False	NA	NA	False	AATAAA	-20	NA	4175969	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_3417_34	chr10	+	2060	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-211	14	-211	1	multi-exon	FALSE	canonical	3	48	junction_1	17.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80973575	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_34170_18	chr19	+	897	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	-19	-4	-5	-1	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4381	False	NA	NA	False	AATAAA	-20	NA	4175969	4181730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
Isoform_34171_6	chr19	+	1065	6	NIC	ENSMUSG00000024845.20	novel	937	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	163	junction_2	211.997735836966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGACAGTTGCACTTTC	4375	False	NA	NA	False	AATAAA	-17	NA	4175963	4181727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181029_4181075_4181227_4181282_4181360
Isoform_34174_143	chr19	+	1839	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	140.317354593079	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3610	False	NA	18	True	AATAAA	-19	NA	4198652	4204034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_34176_22	chr19	+	2592	9	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	402	junction_1	84.6935652809586	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3611	False	NA	12	True	AATAAA	-13	NA	4198653	4204028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
Isoform_34177_12	chr19	+	1946	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	402	junction_1	79.8759841223016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
Isoform_34178_372	chr19	+	1840	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	402	junction_1	75.9439925208044	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_34182_11	chr19	+	1967	10	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	21	6	8	-4	intron_retention	FALSE	canonical	3	251	junction_1	120.959129920445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3596	False	NA	12	True	AATAAA	-13	NA	4198638	4204028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
Isoform_34183_255	chr19	+	1847	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	35	6	0	-4	multi-exon	FALSE	canonical	3	251	junction_1	114.751906302248	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGACCTACTG	3610	False	NA	12	True	AATAAA	-13	NA	4198652	4204028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_34184_19	chr19	+	1897	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	-9	0	-9	0	multi-exon	TRUE	canonical	3	251	junction_1	114.751906302248	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3566	False	NA	18	True	AATAAA	-19	NA	4198608	4204034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
Isoform_34188_4330	chr19	+	1379	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	94	0	0	0	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	4330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3371	False	NA	31	True	AATAAA	-20	NA	4242157	4245419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
Isoform_3419_8	chr10	+	3003	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-7	-1133	-7	1133	multi-exon	FALSE	canonical	3	48	junction_1	17.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80973779	80985425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_80973905_80979795_80981052_80983803
Isoform_34204_8	chr19	+	864	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	47	2	-40	1	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCTTACATCTCT	NA	False	NA	4	True	AATAAA	-16	NA	4281999	4283686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
Isoform_34206_92	chr19	+	4019	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	40	2	0	-2	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	1741	False	NA	8	True	AATAAA	-23	NA	4560553	4671705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
Isoform_34207_3	chr19	+	4482	21	FSM	ENSMUSG00000024892.18	ENSMUST00000068004.13	4148	21	73	-407	19	407	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGCTGTGACCTTTGTC	1760	False	NA	NA	False	NA	NA	NA	4560572	4672187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
Isoform_34208_3	chr19	+	2558	11	NIC	ENSMUSG00000024892.18	novel	4044	20	NA	NA	13228	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	31.7523227496824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	NA	False	NA	7	True	AATAAA	-22	NA	4657663	4671704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
Isoform_34211_4	chr19	+	2081	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-14	2127	8	-1486	multi-exon	FALSE	canonical	3	81	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4806578	4809243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4806690_4807273
Isoform_34212_16	chr19	+	1810	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-28	1	0	-1	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCTTAACTGAGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	4806570	4815967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
Isoform_34214_111	chr19	+	1942	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	32	6	0	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905189	4910940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_34215_17	chr19	+	1973	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	1	6	1	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905158	4910940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_34217_3	chr19	+	1891	14	NIC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	27.6749945879631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTGGTGTAAGT	NA	False	NA	2	True	AATAAA	-13	NA	4905250	4910938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_4905515_4905725_4905837_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
Isoform_34218_6	chr19	+	2245	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162088.8	2269	3	14	10	-8	-8	multi-exon	TRUE	canonical	2	7	junction_1	79	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAAGATCATGTCTTT	NA	False	NA	12	True	NA	NA	NA	4928709	4935415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4928765_4930148_4930427_4933503
Isoform_34219_15	chr19	+	2298	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	14	2	0	-2	multi-exon	FALSE	canonical	3	16	junction_1	74.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCATGTCTTTTTGTTT	NA	False	NA	18	True	NA	NA	NA	4928731	4935421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4928834_4930148_4930427_4933503
Isoform_34221_83	chr19	+	2506	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	42	10	-9	-8	multi-exon	FALSE	canonical	3	97	junction_1	34	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAAGATCATGTCTTT	NA	False	NA	12	True	NA	NA	NA	4928741	4935415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4929058_4930148_4930427_4933503
Isoform_34223_3	chr19	+	2722	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1062	-721	1	704	multi-exon	FALSE	canonical	3	165	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTATTTATTATTGTAA	NA	False	NA	2	True	AATAAA	-11	NA	4928732	4934531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_4930427_4933503
Isoform_34225_7	chr19	+	937	6	NNC	ENSMUSG00000024902.6	novel	3045	5	NA	NA	-7	191	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	238.556995286242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTTCTGATTCATG	3752	False	NA	NA	False	NA	NA	NA	5012383	5015163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701_5014998_5015032
Isoform_34226_265	chr19	+	825	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	168	2052	-15	3	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGCTTCTCTCCTGA	3711	False	NA	13	True	AATAAA	-16	NA	5012342	5014975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
Isoform_34227_5	chr19	+	842	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	-26	-3	-8	3	multi-exon	FALSE	canonical	2	9	junction_4	253.71871728353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGCTTCTCTCCTGA	3718	False	NA	13	True	AATAAA	-16	NA	5012349	5014975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
Isoform_34228_55	chr19	+	2412	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	204	3	-7	0	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4262	False	NA	18	True	ATTAAA	-19	NA	5074091	5081997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_34229_67	chr19	+	2365	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	251	3	-3	0	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4309	False	NA	18	True	ATTAAA	-19	NA	5074138	5081997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_34231_14	chr19	+	2230	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4309	False	NA	18	True	ATTAAA	-19	NA	5074138	5081997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_34232_3	chr19	+	2227	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	26.9770272639518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGACGGATTCCTGGAGTG	4280	False	NA	12	True	ATTAAA	-13	NA	5074109	5081991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_34233_18	chr19	+	2280	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	24.5063257139866	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGATTCCTGGAGTGTTC	4309	False	NA	15	True	ATTAAA	-16	NA	5074138	5081994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5074306_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
Isoform_34234_27	chr19	+	2060	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	-26	-2	-26	2	multi-exon	FALSE	canonical	3	75	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTCTGTTACTCTCCT	176	False	NA	11	True	AATAAA	-18	NA	5088827	5091161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5090061_5090334
Isoform_34235_83	chr19	+	2005	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	27	0	27	0	multi-exon	FALSE	canonical	3	75	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTTACTCTC	229	False	NA	9	True	AATAAA	-16	NA	5088880	5091159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5090061_5090334
Isoform_34237_4	chr19	+	2166	8	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	13	2	13	-2	intron_retention	FALSE	canonical	3	224	junction_4	17.8142341619142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGCTGATGTGTGGC	2743	False	NA	6	True	AATAAA	-17	NA	5091394	5099943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536
Isoform_34238_197	chr19	+	1374	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	12	2	12	-2	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGCTGATGTGTGGC	2742	False	NA	6	True	AATAAA	-17	NA	5091393	5099943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
Isoform_34239_7	chr19	+	1477	10	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	76.2029454082248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2757	False	NA	3	True	AATAAA	-14	NA	5091408	5099940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5091640_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
Isoform_34240_8	chr19	+	4434	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	-250	0	102	0	multi-exon	FALSE	canonical	3	10	junction_1	7.87557562074193	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100610	5107099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
Isoform_34241_9	chr19	+	1096	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	13	379	-2	1	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGGCTTGACCCTGGT	NA	False	NA	23	True	NA	NA	NA	5138585	5142530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
Isoform_34242_44	chr19	+	2326	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	231	-1	27	1	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTATGAAGAGTTT	2023	False	NA	24	True	AATAAA	-41	NA	5416999	5421555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34244_6	chr19	+	2881	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	-346	21	-346	-21	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTAACTTCTCT	1446	False	NA	2	True	AATAAA	-19	NA	5416422	5421533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34245_50	chr19	+	1177	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	103	1276	-101	-1276	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	1895	False	NA	24	True	ATTAAA	-24	NA	5416871	5420278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34246_326	chr19	+	989	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	291	1276	10	-1276	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCTGAGTGGCTCTC	2083	False	NA	24	True	ATTAAA	-24	NA	5417059	5420278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34247_8	chr19	+	1301	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	-25	1280	-25	-1280	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGGTGTCTGAGTGGC	1767	False	NA	20	True	ATTAAA	-20	NA	5416743	5420274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34251_8	chr19	+	2528	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	29	-1	29	1	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTATGAAGAGTTT	1821	False	NA	24	True	AATAAA	-41	NA	5416797	5421555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
Isoform_34257_35	chr19	+	1513	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	17	-2	4	2	multi-exon	FALSE	canonical	3	164	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTCCTGATGGTTAT	264	False	NA	36	True	AATAAA	-37	NA	5475188	5477343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5475337_5475978
Isoform_34258_99	chr19	+	1209	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	1	-1	1	1	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510644	5515080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
Isoform_34259_6	chr19	+	1483	9	NIC	ENSMUSG00000024911.8	novel	1569	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510645	5515077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
Isoform_34260_49	chr19	+	1230	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	-12	-3	1	1	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510644	5515080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
Isoform_34261_5	chr19	+	1508	9	NIC	ENSMUSG00000024911.8	novel	1215	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_5	37.3019771593946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCCTTGTTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	5510642	5515078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5514244_5514361_5514460_5514952
Isoform_34262_4	chr19	+	1843	11	NIC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	23.0008695487801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5523978	5531881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5524352_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_34263_15	chr19	+	1541	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	16	0	-3	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524731	5531881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_34264_7	chr19	+	1612	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	-55	0	-55	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524660	5531881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
Isoform_34267_5535	chr19	+	1117	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	66	1171	5	1	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	5535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGCTTTTGGGTTTGGG	NA	False	NA	13	True	NA	NA	NA	5540548	5544058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
Isoform_34277_7	chr19	+	2795	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	-11	1	-11	-1	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTCCTGGCCTGTTTT	7955	False	NA	NA	False	NA	NA	NA	5618041	5621288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5618112_5618467_5618636_5618731
Isoform_34278_4	chr19	+	960	2	FSM	ENSMUSG00000024925.12	ENSMUST00000127071.2	869	2	-23	-68	-9	1	multi-exon	FALSE	canonical	3	310	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTGTGGGCAC	5036	False	NA	5	True	AATAAA	-14	NA	5651891	5652963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5652109_5652220
Isoform_34279_8	chr19	+	884	3	FSM	ENSMUSG00000024925.12	ENSMUST00000155639.2	771	3	-111	-2	-9	0	multi-exon	FALSE	canonical	3	241	junction_2	34.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGTCTGTGGGCA	5036	False	NA	4	True	AATAAA	-13	NA	5651891	5652962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5652109_5652220_5652403_5652477
Isoform_34280_128	chr19	+	631	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	-9	504	-9	1	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTGTGGGCAC	5036	False	NA	5	True	AATAAA	-14	NA	5651891	5652963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
Isoform_34281_131	chr19	+	599	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	23	504	9	1	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTGTGGGCAC	5068	False	NA	5	True	AATAAA	-14	NA	5651923	5652963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
Isoform_34282_3	chr19	+	818	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	-9	317	-9	184	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTCCTGTACAGAATGCT	5036	False	NA	NA	False	TATAAA	-18	NA	5651891	5653150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
Isoform_34283_94	chr19	+	2456	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	261	-1	25	1	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGAGTAGCTGTCTTTC	NA	False	NA	11	True	AATAAA	-17	NA	5687771	5698159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_34285_24	chr19	+	2702	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	12	2	12	-2	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGAGAGTAGCTGTCT	NA	False	NA	8	True	AATAAA	-14	NA	5687522	5698156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_34286_5	chr19	+	2557	11	NIC	ENSMUSG00000024927.9	novel	786	5	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	26.9287949971773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687976	5698158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5688177_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
Isoform_3429_8749	chr10	+	3072	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	2	15	-2	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	8749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
Isoform_34290_21	chr19	+	3754	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5738770	5752891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_34292_12	chr19	+	2445	11	NIC	ENSMUSG00000004054.10	novel	441	3	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.36439292219	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5738779	5752891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_5738859_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_34293_4	chr19	+	3841	12	FSM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	52	5	-45	3	multi-exon	FALSE	canonical	3	4	junction_1	25.7338571721901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTAATGTCACCTTT	NA	False	NA	5	True	AATAAA	-17	NA	5739116	5752888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5739295_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_34295_25	chr19	+	3562	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	720	2	623	-2	3prime_fragment	FALSE	canonical	3	57	junction_1	13.4577528254576	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5739784	5752891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_34296_24	chr19	+	3647	10	ISM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	635	2	538	-2	3prime_fragment	FALSE	canonical	3	57	junction_1	13.4577528254576	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATGTCACCTTTCTT	NA	False	NA	8	True	AATAAA	-20	NA	5739699	5752891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_34297_4	chr19	+	3479	25	ISM	ENSMUSG00000024940.12	ENSMUST00000081496.6	5190	28	5085	0	256	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2.3090251670829	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	5796016	5808560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797885_5798602_5798620_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
Isoform_34298_4	chr19	+	2084	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	397	-1	353	1	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGATCCCTTTCTGTC	3263	False	NA	NA	False	AATAAA	-18	NA	5928241	5935795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
Isoform_34299_3	chr19	+	2524	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	-45	1	-36	-1	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATGATCCCTTTCTG	2821	False	NA	NA	False	AATAAA	-16	NA	5927799	5935793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
Isoform_343_56	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4003_+_0_4000
Isoform_34300_3	chr19	+	751	2	FSM	ENSMUSG00000110156.3	ENSMUST00000209642.2	647	2	135	-239	4	3	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACACTACACAGCGGCTC	9359	False	NA	6	True	NA	NA	NA	5962984	5964860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5963101_5964225
Isoform_34301_3	chr19	+	1257	2	NNC	ENSMUSG00000110156.3	novel	647	2	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAAGCTCACACTAC	9359	False	NA	-4	True	NA	NA	NA	5962984	5964850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_5963101_5963709
Isoform_34302_3	chr19	+	3058	15	ISM	ENSMUSG00000024807.19	ENSMUST00000156550.8	3363	16	391	-6	-8	3	intron_retention	FALSE	canonical	3	88	junction_11	13.7605247289602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAACGTGTCACCTAGGG	1216	False	NA	16	True	AATAAA	-19	NA	6097082	6103745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357
Isoform_34303_90	chr19	+	2978	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	489	-3	0	3	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAACGTGTCACCTAGGG	1228	False	NA	16	True	AATAAA	-19	NA	6097094	6103745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
Isoform_34304_3	chr19	+	3240	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	228	-4	142	4	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACGTGTCACCTAGGGT	967	False	NA	17	True	AATAAA	-20	NA	6096833	6103746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
Isoform_34307_1522	chr19	+	548	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	65	0	-33	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1047	False	NA	4	True	AATAAA	-16	NA	6107938	6109549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
Isoform_34310_208	chr19	+	545	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-34	-3	-33	0	multi-exon	FALSE	canonical	3	1236	junction_1	5677.26170790109	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1047	False	NA	4	True	AATAAA	-16	NA	6107938	6109549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
Isoform_34317_4	chr19	+	2063	5	ISM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	80	4	80	-4	intron_retention	FALSE	canonical	3	441	junction_2	20.5243757517738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	31	True	AATAAA	-16	NA	6135092	6141803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080
Isoform_34318_246	chr19	+	1934	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	86	4	86	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	31	True	AATAAA	-16	NA	6135098	6141803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_34319_102	chr19	+	1957	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	63	4	63	-4	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCAGACTGCTTTT	NA	False	NA	31	True	AATAAA	-16	NA	6135075	6141803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_34320_14	chr19	+	3199	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	108	-1283	108	1283	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGAGGTTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	6135120	6143090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
Isoform_34321_3	chr19	+	1568	10	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-51	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.54062594260057	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAATTCTACTGCCCTG	7987	False	NA	3	True	AATAAA	-19	NA	6234366	6274248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
Isoform_34322_6	chr19	+	3291	18	ISM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	54	10033	54	7	5prime_fragment	FALSE	canonical	3	75	junction_9	12.0109523260459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGCACGTGGTGCAAA	8998	False	NA	NA	False	NA	NA	NA	6291751	6302332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735
Isoform_34323_6	chr19	+	6338	40	FSM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	-2	35	-2	5	multi-exon	TRUE	canonical	3	75	junction_9	16.8787297726361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGTCCAGGTCCTCTG	8942	False	NA	20	True	AATAAA	-20	NA	6291695	6312330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
Isoform_34325_622	chr19	+	3187	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	161	5	-39	-5	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCATGCTCCCTTG	NA	False	NA	11	True	ATTAAA	-19	NA	6326915	6350121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_34330_30	chr19	+	3375	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-30	8	-30	-8	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTCTCATGCTCCC	NA	False	NA	8	True	ATTAAA	-16	NA	6326724	6350118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
Isoform_34340_205	chr19	+	2604	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	52	-4	-8	4	multi-exon	FALSE	canonical	3	66	junction_1	106.997403914508	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	606	False	NA	16	True	GATAAA	-16	NA	6385060	6390914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_34341_26	chr19	+	2656	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	0	-4	0	4	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	554	False	NA	16	True	GATAAA	-16	NA	6385008	6390914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_34343_273	chr19	+	2583	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	51	5	0	4	multi-exon	FALSE	canonical	3	89	junction_1	99.9901229690114	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	639	False	NA	16	True	GATAAA	-16	NA	6385093	6390914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_34346_486	chr19	+	2963	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	7	5	0	4	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATGTATGTAT	621	False	NA	16	True	GATAAA	-16	NA	6385075	6390914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
Isoform_34352_6	chr19	+	4619	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	29	-4	-2	4	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGTGAGGATCAAT	1420	False	NA	NA	False	NA	NA	NA	6391218	6405649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
Isoform_34353_13	chr19	+	2869	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	29	1746	-2	1	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTAGTCTCTCTGAGG	1420	False	NA	11	True	ATTAAA	-15	NA	6391218	6403899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
Isoform_34354_3	chr19	+	2911	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	-12	1745	-7	2	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTAGTCTCTCTGAGGT	1379	False	NA	12	True	ATTAAA	-16	NA	6391177	6403900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
Isoform_34356_58	chr19	+	3518	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	-1	836	-1	-2	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGGTCCGTTTCTTT	601	False	NA	13	True	AATAAA	-13	NA	6413718	6427224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
Isoform_34358_271	chr19	+	3277	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	243	833	11	1	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	845	False	NA	16	True	AATAAA	-16	NA	6413962	6427227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
Isoform_34367_254	chr19	+	2638	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	11	0	11	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	845	False	NA	15	True	AATAAA	-15	NA	6413962	6427226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
Isoform_34368_44	chr19	+	2874	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-225	0	7	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	609	False	NA	15	True	AATAAA	-15	NA	6413726	6427226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
Isoform_34371_44	chr19	+	3287	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	160	junction_10	310.864777229943	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGTTTCTTTTCTTTTA	834	False	NA	20	True	AATAAA	-20	NA	6413951	6427231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687
Isoform_34374_25	chr19	+	2646	13	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	160	junction_10	355.987622678093	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGTCCGTTTCTTTTCTT	834	False	NA	17	True	AATAAA	-17	NA	6413951	6427228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6426325
Isoform_34376_33	chr19	+	3280	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	98	junction_10	326.079521231657	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	845	False	NA	15	True	AATAAA	-15	NA	6413962	6427226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
Isoform_34378_26	chr19	+	2654	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	203	6	0	1	multi-exon	FALSE	canonical	3	98	junction_10	368.940026366828	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	834	False	NA	16	True	AATAAA	-16	NA	6413951	6427227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
Isoform_34382_14	chr19	+	3199	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	-1	intron_retention	FALSE	canonical	3	57	junction_2	340.283668733325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	845	False	NA	14	True	AATAAA	-14	NA	6413962	6427225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
Isoform_34391_14	chr19	+	2856	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	18	0	2	0	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTCTGTTGCAAAATA	NA	False	NA	14	True	AATAAA	-24	NA	6434446	6448489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
Isoform_34392_4	chr19	+	571	5	NIC	ENSMUSG00000032946.17	novel	573	5	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.986081118759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449496	6453667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6449548_6451745_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_34393_47	chr19	+	621	5	NIC	ENSMUSG00000032946.17	novel	648	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.357558422953	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449893	6453667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_34394_14	chr19	+	601	5	FSM	ENSMUSG00000032946.17	ENSMUST00000150713.8	453	5	11	-159	5	-1	multi-exon	TRUE	canonical	0	0	junction_3	119.445332684036	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6449908	6453667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6449995_6451750_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_34395_48	chr19	+	531	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	3	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAGGGTCATGTCAC	NA	False	NA	13	True	NA	NA	NA	6451734	6453667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
Isoform_34397_5	chr19	+	2137	16	ISM	ENSMUSG00000032946.17	ENSMUST00000167240.8	2192	17	1122	2	3	2	3prime_fragment	FALSE	canonical	0	0	junction_2	88.3572043217504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6451734	6465243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_34399_12	chr19	+	927	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	-6	-2	-6	2	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6458428	6465243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_344_771	SIRV4	-	618	2	FSM	SIRV4B	SIRV406	617	2	0	-1	0	1	multi-exon	FALSE	canonical	3	2584	junction_1	0	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAAAATAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	5158	3636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_-_4104_5007
Isoform_34400_56	chr19	+	653	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4666	-2	4666	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463100	6465243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_34402_17	chr19	+	722	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4597	-2	4597	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463031	6465243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
Isoform_34403_4	chr19	+	559	3	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	5355	4	5355	2	3prime_fragment	FALSE	canonical	3	164	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGATCATCAGCCTAAAA	NA	False	NA	16	True	AATAAA	-18	NA	6463789	6465237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6464072_6464821_6464885_6465023
Isoform_34404_3	chr19	+	3319	8	NIC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.44114392723358	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGCCCAGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	6477895	6532727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6478809_6493660_6493679_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
Isoform_34405_6	chr19	+	2558	4	ISM	ENSMUSG00000033768.18	ENSMUST00000113458.8	3503	7	15778	-3	-3599	3	3prime_fragment	FALSE	canonical	1	1	junction_1	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGTAGTTTGTTCGG	NA	False	NA	18	True	AAAAAG	-28	NA	6563635	6583250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_6563836_6566952_6567279_6569278_6569358_6581297
Isoform_34406_99	chr19	+	575	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	401	9	-5	-9	multi-exon	FALSE	canonical	3	803	junction_1	23.6971634495683	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAAAGCGGTTTCTCT	9715	False	NA	7	True	ATTAAA	-7	NA	6887515	6888387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
Isoform_34407_69	chr19	+	994	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-18	9	-18	-9	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAAAGCGGTTTCTCT	9296	False	NA	7	True	ATTAAA	-7	NA	6887096	6888387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
Isoform_34410_14	chr19	+	1423	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	23	6	23	0	multi-exon	FALSE	canonical	2	8	junction_1	43.6526695123626	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	8704	False	NA	10	True	AATAAA	-15	NA	6919251	6929261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
Isoform_34411_3	chr19	+	1019	4	NIC	ENSMUSG00000024959.15	novel	990	4	NA	NA	37	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	40.4502437844597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGCCTCTATCCTTCGT	9421	False	NA	11	True	AATAAA	-16	NA	6919968	6929262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_6919993_6920234_6920415_6928007_6928199_6928638
Isoform_34412_88	chr19	+	890	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	100	0	37	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9421	False	NA	10	True	AATAAA	-15	NA	6919968	6929261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
Isoform_34413_50	chr19	+	920	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	70	0	7	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9391	False	NA	10	True	AATAAA	-15	NA	6919938	6929261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
Isoform_34416_240	chr19	+	735	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	263	1	-10	-1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTTGGCTGGTCTTTT	1843	False	NA	NA	False	AATAAA	-28	NA	6952598	6954691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
Isoform_34419_69	chr19	+	857	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	141	1	-132	-1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTTGGCTGGTCTTTT	1721	False	NA	NA	False	AATAAA	-28	NA	6952476	6954691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
Isoform_34421_38	chr19	+	906	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	92	1	92	-1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTTGGCTGGTCTTTT	1672	False	NA	NA	False	AATAAA	-28	NA	6952427	6954691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
Isoform_34425_8	chr19	+	852	4	FSM	ENSMUSG00000056612.8	ENSMUST00000236218.2	605	4	-35	-212	-18	0	multi-exon	FALSE	canonical	3	53	junction_1	1483.18268897964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGCTTGGCTGGTCTT	1835	False	NA	NA	False	AATAAA	-26	NA	6952590	6954689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6952986_6953911_6953996_6954225_6954259_6954349
Isoform_34427_41	chr19	+	1103	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTTCCTCATCCG	NA	False	NA	38	True	ATTAAA	-44	NA	6973539	6976414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
Isoform_34428_4	chr19	+	917	6	FSM	ENSMUSG00000047656.10	ENSMUST00000237234.2	972	6	51	4	10	-4	multi-exon	FALSE	canonical	3	11	junction_2	13.8650640099496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGATTTGTGGTTCCT	NA	False	NA	32	True	ATTAAA	-38	NA	6973549	6976408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976025_6976137_6976259
Isoform_34429_23	chr19	+	1249	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-16	-5	-16	5	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8516	False	NA	11	True	AATAAA	-21	NA	7034161	7175427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
Isoform_34430_7	chr19	+	1214	10	NIC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-16	5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	15.0185071014251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8516	False	NA	11	True	AATAAA	-21	NA	7034161	7175427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175277
Isoform_34431_109	chr19	+	2305	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	44	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7244733	7252588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_34434_3351	chr19	+	2816	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	7	0	7	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	3351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245650	7252590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_34435_201	chr19	+	2895	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-72	0	-72	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245571	7252590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
Isoform_34453_3	chr19	+	2022	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-53	2399	-13	1	multi-exon	TRUE	canonical	3	31	junction_6	6.18409698788397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGGAAGCAGTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	7471749	7511566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
Isoform_34455_45	chr19	+	761	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	0	2762	0	-928	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTTTGTGAGGATA	NA	False	NA	7	True	AATAAA	-9	NA	7534823	7563148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
Isoform_34456_20	chr19	+	997	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	0	904	0	-904	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCTACCTGGTGTGAAG	NA	False	NA	31	True	AATAAA	-33	NA	7534849	7563172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
Isoform_34457_6	chr19	+	1136	4	NIC	ENSMUSG00000060675.14	novel	1901	5	NA	NA	3	-899	intron_retention	FALSE	canonical	3	191	junction_2	16.9771087709958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTGGTGTGAAGTCTCT	NA	False	NA	36	True	AATAAA	-38	NA	7534844	7563177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
Isoform_34458_102	chr19	+	592	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	1	0	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700850	8703806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_34460_5	chr19	+	783	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	444	junction_1	212.636279830136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700848	8703807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8700871_8701504_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_34461_3	chr19	+	621	10	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	350.936243374178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700847	8703806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8700871_8701504_8701554_8701740_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_34462_132	chr19	+	574	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_34463_6	chr19	+	762	8	FSM	ENSMUSG00000108414.2	ENSMUST00000206135.2	744	8	-18	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	116.047316176794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701503	8703807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
Isoform_34469_592	chr19	+	1221	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-17	0	-5	0	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCTTTTGTGATGG	958	False	NA	28	True	AATAAA	-21	NA	8713185	8717988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
Isoform_34472_8	chr19	+	1306	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1012	junction_7	81.959038248489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGACCTTTTGTGAT	953	False	NA	26	True	AATAAA	-19	NA	8713180	8717986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
Isoform_34474_77	chr19	+	1794	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	30	427	-27	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6579	False	NA	12	True	NA	NA	NA	8718806	8733006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_34475_13	chr19	+	2015	11	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.2485293921929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6937	False	NA	12	True	NA	NA	NA	8719164	8733006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_34476_101	chr19	+	2114	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	190	junction_5	5.51764845241562	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6937	False	NA	12	True	NA	NA	NA	8719164	8733006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
Isoform_34478_277	chr19	+	2251	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	75	0	-2	0	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	8644	False	NA	47	True	GATAAA	-26	NA	8734511	8748286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_34479_216	chr19	+	2312	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	14	0	14	0	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	8583	False	NA	47	True	GATAAA	-26	NA	8734450	8748286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_34482_29	chr19	+	4044	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	1	-3	1	3	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8604	False	NA	35	True	GATAAA	-14	NA	8734471	8748274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
Isoform_34485_233	chr19	+	723	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	7	18	7	-18	multi-exon	FALSE	canonical	3	838	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTACTTAAGCCAT	6526	False	NA	NA	False	AATAAA	-20	NA	8748366	8749821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8748680_8749411
Isoform_34486_8	chr19	+	2229	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	7	-1488	7	1488	multi-exon	FALSE	canonical	3	838	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGTGTTTTAGACTC	6526	False	NA	NA	False	AATAAA	-16	NA	8748366	8751327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8748680_8749411
Isoform_34487_23	chr19	+	2050	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-51	5	-51	-5	multi-exon	FALSE	canonical	3	20	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCCCTTTGAACTGGT	5377	False	NA	7	True	CATAAA	-12	NA	8779867	8782205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8780050_8780337
Isoform_34493_16	chr19	+	3053	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-5	2070	-5	-2070	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTTTGTATTTTCTTT	NA	False	NA	22	True	AATAAA	-32	NA	8797368	8809437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_34495_5	chr19	+	2784	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-32	2366	-32	-2366	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGGTTATTTGTAATCAA	NA	False	NA	19	True	TATAAA	-15	NA	8797341	8809141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
Isoform_34496_8	chr19	+	1949	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	-3	16	-3	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8814827	8826031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_34497_10	chr19	+	1872	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	71	19	71	-2	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8814901	8826028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_34498_19	chr19	+	1733	12	FSM	ENSMUSG00000071657.13	ENSMUST00000159634.8	1684	12	-49	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8815043	8826031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_34500_17	chr19	+	1591	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	205	-1	143	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8816896	8826031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_34501_24	chr19	+	1371	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	18	-1	2	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8817900	8826031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
Isoform_34505_128	chr19	+	1056	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-15	-8	-15	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5897	False	NA	33	True	AATAAA	-21	NA	8848907	8853028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_34507_8	chr19	+	1178	9	NIC	ENSMUSG00000071655.13	novel	1033	10	NA	NA	28	0	intron_retention	FALSE	canonical	3	339	junction_1	343.320345122453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5877	False	NA	33	True	AATAAA	-21	NA	8848887	8853028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8848950_8849034_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_34514_204	chr19	+	1102	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-12	201	-12	-1	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCCTGGCTCCTTCCA	5934	False	NA	31	True	AATAAA	-19	NA	8848944	8853026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_34515_154	chr19	+	1161	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-69	199	28	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5877	False	NA	33	True	AATAAA	-21	NA	8848887	8853028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
Isoform_34520_38	chr19	+	716	5	FSM	ENSMUSG00000071653.10	ENSMUST00000185488.7	500	5	-21	-195	-5	0	multi-exon	FALSE	canonical	3	137	junction_2	1592.05511839258	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866257	8868105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8866329_8866487_8866613_8867000_8867092_8867366_8867465_8867774
Isoform_34522_77	chr19	+	2511	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	41	-1746	-5	1746	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866257	8869991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
Isoform_34523_908	chr19	+	625	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	41	140	-5	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866257	8868105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
Isoform_34527_12	chr19	+	720	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1620.00408950101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866257	8868105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_8866329_8866487_8866613_8866996_8867092_8867366_8867465_8867774
Isoform_34532_782	chr19	+	3259	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	10	5	10	-5	multi-exon	FALSE	canonical	3	204	junction_1	0	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACAGTCCAGTGTTTCT	NA	False	NA	15	True	AATAAA	-16	NA	8870378	8875247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8870513_8872122
Isoform_34534_106	chr19	+	3837	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-11	34	-11	-34	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACGAAACAA	1882	False	NA	-90	True	GATAAA	-8	NA	8875453	8894002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
Isoform_34536_265	chr19	+	3771	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-17	34	-11	-34	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACGAAACAA	1882	False	NA	-90	True	GATAAA	-8	NA	8875453	8894002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
Isoform_34552_56	chr19	+	1512	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	91	0	-19	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4803	False	NA	19	True	AATAAA	-16	NA	8897828	8904600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
Isoform_34553_42	chr19	+	1562	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	41	0	20	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4753	False	NA	19	True	AATAAA	-16	NA	8897778	8904600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
Isoform_34555_10	chr19	+	1326	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-3	-414	-3	-4	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4819	False	NA	15	True	AATAAA	-12	NA	8897844	8904596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
Isoform_34556_9	chr19	+	1425	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-98	-418	-9	0	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4724	False	NA	19	True	AATAAA	-16	NA	8897749	8904600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
Isoform_34558_31	chr19	+	3188	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	119	15	119	-15	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	2034	False	NA	-9	True	NA	NA	NA	8907034	8918931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_34560_16	chr19	+	3432	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	-125	15	-125	-15	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	1790	False	NA	-9	True	NA	NA	NA	8906790	8918931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_34561_23	chr19	+	3192	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-229	15	112	-15	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	2027	False	NA	-9	True	NA	NA	NA	8907027	8918931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_34562_6	chr19	+	3435	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-472	15	-131	-15	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	1784	False	NA	-9	True	NA	NA	NA	8906784	8918931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_34563_8	chr19	+	3323	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-360	15	-19	-15	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTAACTGCC	1896	False	NA	-9	True	NA	NA	NA	8906896	8918931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
Isoform_34567_2784	chr19	+	3124	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	11	0	-11	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	2784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCTCCAGGCTCAGC	3469	False	NA	9	True	AATAAA	-13	NA	8919238	8929656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_34569_193	chr19	+	3157	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-30	8	-30	-8	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3439	False	NA	12	True	AATAAA	-16	NA	8919208	8929659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_34572_53	chr19	+	3254	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-122	3	-122	-3	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTCAGCTATTCTGT	3347	False	NA	17	True	AATAAA	-21	NA	8919116	8929664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
Isoform_34586_4	chr19	+	1952	5	FSM	ENSMUSG00000071645.7	ENSMUST00000236564.2	1858	5	-95	1	-12	-1	multi-exon	FALSE	canonical	3	135	junction_1	17.1955662890176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTGTCCGCATCTC	1345	False	NA	NA	False	AATAAA	-23	NA	8931198	8940864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707
Isoform_34587_322	chr19	+	2757	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-12	8	-12	-8	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGACATTTAATGTTCTT	1345	False	NA	3	True	AATAAA	-18	NA	8931198	8943566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_34588_6	chr19	+	2869	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-122	6	-122	-6	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATTTAATGTTCTTTT	1235	False	NA	5	True	AATAAA	-20	NA	8931088	8943568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_34589_5	chr19	+	2274	8	NIC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-11	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	55.7615184403681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACAGACATTTAATGTT	1346	False	NA	0	True	AATAAA	-15	NA	8931199	8943563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8941383_8941494_8941627_8941739_8941924_8942018_8942397
Isoform_34594_6014	chr19	+	1412	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	154	298	154	-298	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	6014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCCTGTCCTGCCTC	997	False	NA	12	True	ATTAAA	-17	NA	8944558	8955545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
Isoform_34595_357	chr19	+	1593	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	-30	301	-30	-301	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTTTTTCCTGTCCTGC	813	False	NA	9	True	ATTAAA	-14	NA	8944374	8955542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
Isoform_34608_12	chr7	-	627	1	FSM	ENSMUSG00000107383.2	ENSMUST00000201488.2	1342	1	794	-79	794	79	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	116424292	116423665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_116423700_116424300
Isoform_34615_3	chr19	+	1135	7	NIC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	26.9222130508537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTGTGATCACCATG	NA	False	NA	16	True	AATAAA	-17	NA	8966648	9054281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
Isoform_34616_6	chr19	+	1040	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-10	-200	1	0	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCTGTGATCACC	NA	False	NA	13	True	AATAAA	-14	NA	8966648	9054278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
Isoform_34617_4187	chr19	+	866	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	58	5	0	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	4187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4927	False	NA	18	True	AATAAA	-16	NA	9960067	9962457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
Isoform_34618_67	chr19	+	935	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	-11	5	-11	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4858	False	NA	18	True	AATAAA	-16	NA	9959998	9962457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
Isoform_34625_10	chr19	+	2192	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	33	2921	32	1	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTAGGCGGCAGTGGCC	4000	False	NA	3	True	AATAAA	-18	NA	9995589	10012820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_34626_47	chr19	+	2172	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	58	2916	-14	0	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGGCAGTGGCCTTCAC	4025	False	NA	8	True	AATAAA	-23	NA	9995614	10012825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_34627_30	chr19	+	1969	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	34	1	34	-1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTAGGCGGCAGTGG	4002	False	NA	1	True	AATAAA	-16	NA	9995591	10012818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_34629_3	chr19	+	2100	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	34	-130	34	-1	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCATGGCTACCACCA	4002	False	NA	NA	False	ATTAAA	-16	NA	9995591	10012949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
Isoform_34630_255	chr19	+	3405	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	52	3	1	-3	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160303	10174235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
Isoform_34631_24	chr19	+	3465	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	-8	3	-8	-3	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160243	10174235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
Isoform_34634_304	chr19	+	404	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	196	6	-8	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4173	False	NA	27	True	AATAAA	-16	NA	10181573	10185182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
Isoform_34636_7	chr19	+	3521	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-15	-6	-15	6	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGCATTGTATTTTT	NA	False	NA	22	True	AATAAA	-22	NA	10502614	10525023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_34637_5	chr19	+	3593	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-18	-75	-18	75	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGATTCTGCATTGAAT	NA	False	NA	11	True	AATAAA	-16	NA	10502611	10525092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
Isoform_34639_6	chr19	+	2678	9	FSM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	-36	-8	1	1	multi-exon	FALSE	canonical	3	15	junction_1	28.8693176226942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10554928_10555097_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34640_5	chr19	+	2328	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	27.7319531315376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554818	10567194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_10554928_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34641_4	chr19	+	2236	7	NIC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.2845237853262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554816	10567193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_10554928_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34642_31	chr19	+	2849	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	282	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554817	10567194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34643_4	chr19	+	3041	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	283	-194	1	194	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAATTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	10554818	10567387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34644_3	chr19	+	3118	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	14	-2	14	2	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTTGTTCAGACT	NA	False	NA	16	True	ATTAAA	-19	NA	10554549	10567195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34645_8	chr19	+	2754	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	2	-1282	2	1	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554819	10567194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34646_3	chr19	+	3022	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	-267	-1281	15	0	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554550	10567193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
Isoform_34648_55	chr19	+	4234	28	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	848.081981892655	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	632	False	NA	57	True	AATAAA	-17	NA	10582952	10607184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
Isoform_34650_1631	chr19	+	4212	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	248	-1	-12	1	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	618	False	NA	57	True	AATAAA	-17	NA	10582938	10607184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
Isoform_34688_3	chr19	+	2661	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	25	0	11	0	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666139	10691990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
Isoform_34689_79	chr19	+	2174	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-168	4029	15	-2	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCAGCTTCTTGTGTC	NA	False	NA	13	True	ATTAAA	-19	NA	10872609	10882894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
Isoform_34690_524	chr19	+	2119	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	13	2	13	-2	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCAGCTTCTTGTGTC	NA	False	NA	13	True	ATTAAA	-19	NA	10872607	10882894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
Isoform_34693_3	chr19	+	2271	3	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	0	15	0	-15	intron_retention	FALSE	canonical	3	320	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTGG	161	False	NA	NA	False	NA	NA	NA	11747754	11752309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_11747889_11748165_11748232_11750238
Isoform_34695_7	chr19	+	2694	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-14	-1518	-14	1518	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTTGTGAGTTTCC	147	False	NA	4	True	AATAAA	-13	NA	11747740	11753842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_34697_91	chr19	+	987	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	18	157	-3	10	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCTCTTTGGTCAGTT	179	False	NA	35	True	ATTAAA	-23	NA	11747772	11752167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_34698_15	chr19	+	1158	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-11	15	-11	-15	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTGG	150	False	NA	NA	False	NA	NA	NA	11747743	11752309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
Isoform_347_609	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
Isoform_34700_11	chr19	+	4118	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	1	-961	1	-127	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTGTGCTTTATAC	NA	False	NA	1	True	AATAAA	-15	NA	11889807	11922328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_34702_248	chr19	+	4045	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	44	127	0	-127	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTGTGCTTTATAC	NA	False	NA	1	True	AATAAA	-15	NA	11889806	11922328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_34706_18	chr19	+	4221	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	0	-5	0	5	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTCCATCTCTTTTTG	NA	False	NA	26	True	AATAAA	-16	NA	11889762	11922460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
Isoform_34708_7	chr19	+	3266	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	2	-1	2	1	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTTAGTTATTT	NA	False	NA	5	True	AATAAA	-14	NA	12550888	12567127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
Isoform_34711_12	chr19	+	1161	8	ISM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	0	13096	0	-1643	5prime_fragment	FALSE	canonical	3	57	junction_3	14.2427926635594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGCTATTCTTTCAGA	NA	False	NA	10	True	AATAAA	-22	NA	17114129	17185852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594
Isoform_34712_18	chr19	+	4160	9	FSM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	-7	-2350	-7	2	multi-exon	FALSE	canonical	3	57	junction_3	14.3352711868315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTTCCTCTTTCAAC	NA	False	NA	4	True	AATAAA	-16	NA	17114122	17201298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
Isoform_34715_49	chr19	+	2473	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	1	8	1	-8	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCAACCTGAATCCTGT	1325	False	NA	11	True	AATAAA	-26	NA	17371407	17378705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
Isoform_34716_112	chr19	+	2411	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	70	1	70	-1	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAATCCTGTATCTGTT	1394	False	NA	18	True	AATAAA	-33	NA	17371476	17378712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
Isoform_34723_6	chr19	+	1691	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	-4	253	-4	-19	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTATCTAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	18609309	18629539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
Isoform_34728_6	chr19	+	3466	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	26	1026	26	-1026	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	18648153	18683538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_34730_6	chr19	+	3244	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	0	1274	0	-1274	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTGGCTTTTGAAGT	NA	False	NA	NA	False	TATAAA	-15	NA	18648127	18683290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_34733_7	chr19	+	3428	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	61	1029	-54	-1029	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	18648188	18683535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_34735_6	chr19	+	1847	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-13	2684	-13	294	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTTTATTTTATTTT	NA	False	NA	NA	False	AATAGA	-27	NA	18648114	18681880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
Isoform_34740_38	chr19	+	1670	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	8	-1	8	1	multi-exon	FALSE	canonical	3	347	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9322	False	NA	27	True	AATAAA	-20	NA	18690564	18695793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18691024_18694582
Isoform_34741_47	chr19	+	1635	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	43	-1	0	1	multi-exon	FALSE	canonical	3	347	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9357	False	NA	27	True	AATAAA	-20	NA	18690599	18695793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18691024_18694582
Isoform_34743_12	chr19	+	1692	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-60	-1	-17	1	multi-exon	FALSE	canonical	3	77	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9297	False	NA	27	True	AATAAA	-20	NA	18690539	18695793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_18691024_18694585
Isoform_34744_104	chr19	+	2559	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	11	4815	11	-265	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21249652	21259389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
Isoform_34745_17	chr19	+	2599	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	-30	4816	-30	-266	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTTCTTGTTTATTGG	NA	False	NA	15	True	AATAAA	-15	NA	21249611	21259388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
Isoform_34753_3	chr19	+	2366	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-344	237	-4	-9	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAATGAAAGAAAAATA	NA	False	NA	NA	False	AATGAA	-8	NA	21630544	21662764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
Isoform_34754_3	chr19	+	2426	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-401	234	-61	-6	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAGAAAAATAAAA	NA	False	NA	NA	False	AATGAA	-11	NA	21630487	21662767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
Isoform_34756_8	chr19	+	5247	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-22	1377	-6	-1344	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	21755699	21834347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
Isoform_34757_16	chr19	+	449	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	-45	10	-45	-10	multi-exon	FALSE	canonical	3	58	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23112218	23113071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23112319_23112722
Isoform_34765_191	chr19	+	2838	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-14	1662	-14	1001	multi-exon	FALSE	canonical	3	482	junction_1	0	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAGAAAACA	NA	False	NA	NA	False	AAAACA	-20	NA	23118575	23143836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23119624_23142046
Isoform_34799_4	chr19	+	1868	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-3	10709	-3	0	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTATTTTTTAAATGAT	NA	False	NA	NA	False	AATAAA	-13	NA	23664789	23698323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
Isoform_34800_5	chr19	+	1431	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-2	11145	-2	325	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTTGTTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	23664790	23697887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
Isoform_34801_3	chr19	+	2157	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	22	10395	-13	261	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAACTGCAAGGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	23664814	23698637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
Isoform_34802_7	chr19	+	5637	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214338	25411860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_34803_70	chr19	+	2335	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	5	0	5	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25482986	25581693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_34804_4	chr19	+	2492	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	19	-171	19	171	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGTGGTTTTAGAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	25483000	25581864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_34805_74	chr19	+	2088	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	251	1	162	-1	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGTGTGTATATTT	NA	False	NA	11	True	AATAAA	-19	NA	25483232	25581692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_34806_12	chr19	+	2479	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	-139	0	-139	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25482842	25581693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_34814_4	chr19	+	2251	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	251	-162	162	162	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATCCACCAGTGG	NA	False	NA	NA	False	ATTAAA	-12	NA	25483232	25581855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
Isoform_34815_17	chr19	+	2451	3	NIC	ENSMUSG00000042372.6	novel	2391	2	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	17	True	AATAAA	-13	NA	25587621	25601285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_25587719_25587937_25588632_25599625
Isoform_34818_5	chr19	+	2453	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	-62	0	-62	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	17	True	AATAAA	-13	NA	25587838	25601285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25588632_25599625
Isoform_34819_12	chr19	+	2348	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	-16	5	-16	-5	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCCAGTATTTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	25649758	25656350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
Isoform_34821_7	chr19	+	3318	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGGTTTTGATTATT	NA	False	NA	NA	False	ATTAAA	-11	NA	27194255	27227155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_34823_18	chr19	+	3749	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	1	105	1	2	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGTTTTGATTATTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	27194420	27227157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
Isoform_34833_22	chr19	+	3737	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	61	2	0	-2	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTGCCTCTCATCT	NA	False	NA	15	True	AATAAA	-25	NA	28812534	28891358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
Isoform_34834_23	chr19	+	2415	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	61	1324	0	-2	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGCAGCTTCCCTTGTA	NA	False	NA	2	True	AATGAA	-13	NA	28812534	28890036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
Isoform_34835_16	chr19	+	3774	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	24	2	24	-2	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTGCCTCTCATCT	NA	False	NA	15	True	AATAAA	-25	NA	28812497	28891358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
Isoform_34841_25	chr19	+	2648	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-135	2666	-2	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3834	False	NA	23	True	AATAAA	-17	NA	28967764	28994971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
Isoform_34842_25	chr19	+	2528	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-15	2666	0	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3954	False	NA	23	True	AATAAA	-17	NA	28967884	28994971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
Isoform_34846_344	chr19	+	1766	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	45	-8	45	8	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGTAAATCAGAGTA	NA	False	NA	35	True	CATAAA	-27	NA	29078819	29121251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_34847_23	chr19	+	1843	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	45	-85	45	-1	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATCTGGGATTTTATC	NA	False	NA	112	True	NA	NA	NA	29078819	29121328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_34848_12	chr19	+	1843	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	-40	0	-40	0	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078734	29121243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_3485_680	chr10	+	1513	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	24	193	12	21	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCCCACGCCCCGC	8579	False	NA	16	True	AATAAA	-21	NA	81018862	81028838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
Isoform_34852_5	chr19	+	1755	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	45	84	45	2	multi-exon	FALSE	canonical	3	6	junction_8	128.02514401476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCACTGTAGTGTAAATC	NA	False	NA	29	True	CATAAA	-21	NA	29078819	29121245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
Isoform_34854_13	chr19	+	2180	8	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	45	1	intron_retention	FALSE	canonical	3	369	junction_1	17.8885438199983	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCACTGTAGTGTAAAT	NA	False	NA	28	True	CATAAA	-20	NA	29078819	29121244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
Isoform_34855_11	chr19	+	1704	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	-86	1613	-86	36	multi-exon	FALSE	canonical	3	253	junction_1	21.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCAAAACAAAACAAAAC	3999	False	NA	NA	False	NA	NA	NA	30007826	30034599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_30008332_30016463_30016698_30033634
Isoform_34856_100	chr19	+	3575	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-38	-1	-38	1	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACGCATCCAGCTTTA	4047	False	NA	26	True	AATAAA	-16	NA	30007874	30071123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
Isoform_34860_10	chr19	+	3336	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-59	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	68.3643077301933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACGCATCCAGCTTTA	4026	False	NA	26	True	AATAAA	-16	NA	30007853	30071123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
Isoform_34861_698	chr19	+	2459	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	144	10	-10	-10	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAAGTCATCTCTGCAC	NA	False	NA	13	True	AATAAA	-20	NA	32463312	32492754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
Isoform_34867_214	chr19	+	2067	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	130	6095	32	2088	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTGAATAA	7723	False	NA	NA	False	GATAAA	-10	NA	32735026	32797465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
Isoform_34868_130	chr19	+	2112	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	85	6095	-13	2088	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTGAATAA	7678	False	NA	NA	False	GATAAA	-10	NA	32734981	32797465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
Isoform_34870_10	chr19	+	2207	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	-10	6095	-10	2088	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTGAATAA	7583	False	NA	NA	False	GATAAA	-10	NA	32734886	32797465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
Isoform_34871_12	chr19	+	1974	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	4	10	4	-8	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAAGCTGTCCGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	34169632	34217723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
Isoform_34873_15	chr19	+	1979	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	35	10	35	-8	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACAAGCTGTCCGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	34169663	34217723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
Isoform_34881_3	chr19	+	3580	19	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	-63	24812	-32	13991	5prime_fragment	FALSE	canonical	3	103	junction_1	63.1094727878118	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAGAAGAAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	34899728	34928333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140
Isoform_34882_3	chr19	+	1100	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	36061117	36082168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_34885_106	chr19	+	999	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-11	157	4	142	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTAACAGCTTAATTAA	NA	False	NA	25	True	AATAAA	-21	NA	36061119	36082020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_34886_77	chr19	+	1152	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-11	4	4	-4	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGATTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	36061119	36082173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
Isoform_34887_20	chr19	+	1645	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-18	-1	-18	1	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387129	36433593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
Isoform_34888_4	chr19	+	1731	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-97	-8	-97	-4	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAATGCCAGCTTATT	NA	False	NA	2	True	AATAAA	-14	NA	36387050	36433600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
Isoform_34890_21	chr19	+	1567	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	0	-1	0	1	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387147	36433593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_34891_10	chr19	+	1603	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-36	-1	-36	1	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCCAAAATGCCA	NA	False	NA	-5	True	AATAAA	-7	NA	36387111	36433593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
Isoform_34895_3	chr19	+	2313	9	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-4	33402	-4	-2245	5prime_fragment	FALSE	canonical	3	732	junction_8	38.0583433690958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAGCTCTACAC	NA	False	NA	NA	False	AATAGA	-23	NA	36811627	36837475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454
Isoform_34900_56	chr19	+	5846	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	45	590	45	-590	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811676	36870287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_34901_12	chr19	+	5700	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	4	-588	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36811635	36870289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
Isoform_34902_7	chr19	+	2864	20	ISM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	90	26077	90	-3278	5prime_fragment	TRUE	canonical	3	111	junction_9	10.7816402886119	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACGATTAAAAAAGAAGAGA	NA	False	NA	NA	False	CATAAA	-13	NA	36903568	36964075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854
Isoform_34904_142	chr19	+	1798	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	14	-3	-14	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTCATAGTTCATAGT	NA	False	NA	11	True	ATTAAA	-19	NA	37184938	37199536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
Isoform_34905_6	chr19	+	4113	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	-2301	-3	2301	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTATTTTGTCTGT	NA	False	NA	5	True	AATAAA	-15	NA	37184938	37201851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
Isoform_3491_9	chr10	+	1040	6	ISM	ENSMUSG00000034974.14	ENSMUST00000219850.2	1482	8	6404	-17	-179	17	3prime_fragment	FALSE	canonical	3	353	junction_5	19.3659494990563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTCTCCCACGCC	NA	False	NA	12	True	AATAAA	-17	NA	81026155	81028834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
Isoform_34919_9	chr19	+	1851	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATAGTGTACTTTTGAC	NA	False	NA	22	True	ATTAAA	-30	NA	37184938	37199547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
Isoform_34920_5	chr19	+	1352	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-155	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACGCCTCTTTTGTAT	NA	False	NA	22	True	ATTAAA	-16	NA	37184938	37199221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
Isoform_34924_25	chr19	+	2215	15	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-23	12255	-23	3833	5prime_fragment	FALSE	canonical	3	286	junction_7	24.9089157056796	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGTTTTCTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	37364827	37398052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923
Isoform_34928_11	chr19	+	4878	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-59	0	-59	0	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364791	37410307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
Isoform_3493_279	chr10	+	2053	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	43	10	-6	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1363	False	NA	18	True	TATAAA	-21	NA	81104048	81109070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_34930_18	chr19	+	4838	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-17	-2	-17	2	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGCCTGTACATTT	NA	False	NA	10	True	ATTAAA	-17	NA	37364833	37410309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
Isoform_34934_3	chr19	+	1829	7	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-54	-16268	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	128.029618968945	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCCAAAAAACAAAGATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	37364796	37377951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37377062
Isoform_34935_5	chr19	+	1739	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	0	63	0	-4	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGACCCTGTTTGAATT	NA	False	NA	16	True	AATGAA	-29	NA	37423257	37429116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
Isoform_34937_32	chr19	+	2737	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-5	811	-5	-7	multi-exon	TRUE	canonical	3	69	junction_16	11.2298193902402	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTCTCTGCTTGC	1864	False	NA	NA	False	AATAAA	-31	NA	37538860	37671696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
Isoform_3494_4	chr10	+	2349	9	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	174	junction_1	25.6024290839756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTAAGTGGTCAG	1363	False	NA	10	True	TATAAA	-13	NA	81104048	81109062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108794_81108882
Isoform_34940_14	chr19	+	3546	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-5	2	-5	-2	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCGGAGATTCTCATT	1864	False	NA	27	True	ATTAAA	-32	NA	37538860	37672505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
Isoform_34941_15	chr19	+	2464	10	FSM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	-24	2	2	0	multi-exon	FALSE	canonical	3	35	junction_2	104.602716958317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043460	38062869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38043530_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34943_50	chr19	+	2503	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043484	38062870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34945_26	chr19	+	2550	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043459	38062868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34946_3	chr19	+	2753	9	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-4	1	intron_retention	FALSE	canonical	3	204	junction_1	54.1548705104167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043480	38062870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043530_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34947_22	chr19	+	2437	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043458	38062868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34949_8	chr19	+	2394	9	FSM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	-29	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	113.762636660724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043458	38062868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38043530_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_3495_14	chr10	+	2052	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	64.5607465880004	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1337	False	NA	18	True	TATAAA	-21	NA	81104022	81109070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_34950_7	chr19	+	2645	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	120.180419924933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043516	38062870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043766_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34951_7	chr19	+	2706	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	103.855669079738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043516	38062869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34952_7	chr19	+	2733	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	27	-3	-20	1	multi-exon	FALSE	canonical	3	91	junction_1	107.147988119351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38043516	38062872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34953_7	chr19	+	2955	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	91	junction_1	88.100705871179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043513	38062869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38043766_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34954_21	chr19	+	2619	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38043516	38062872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
Isoform_34957_263	chr19	+	3411	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	63	0	2	0	multi-exon	FALSE	canonical	3	381	junction_1	3	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384490	38394058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38384750_38388881_38389063_38391087
Isoform_34958_84	chr19	+	3663	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-189	0	-189	0	multi-exon	FALSE	canonical	3	381	junction_1	3	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384238	38394058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38384750_38388881_38389063_38391087
Isoform_34965_11	chr19	+	3479	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-188	-2	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAGTGTCTCACGACTC	NA	False	NA	33	True	AATAAA	-34	NA	38384239	38394056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38384750_38391087
Isoform_34966_40	chr19	+	3230	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384490	38394058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_38384750_38391087
Isoform_34968_432	chr19	+	362	3	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	45	35514	45	-4963	5prime_fragment	FALSE	canonical	3	1753	junction_2	29.5	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTATGATTAACTA	NA	False	NA	6	True	ACTAAA	-23	NA	38919403	38923981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_38919520_38919834_38919957_38923857
Isoform_3497_10	chr10	+	2020	11	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	67.9482155762754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTGGTCAGAAGCTT	1363	False	NA	16	True	TATAAA	-19	NA	81104048	81109068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81104154_81104643_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_34976_261	chr19	+	3052	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	42	2774	42	-2774	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919400	38956721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
Isoform_3498_40	chr10	+	1974	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	59.7863696840676	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1363	False	NA	18	True	TATAAA	-21	NA	81104048	81109070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
Isoform_34982_5	chr19	+	2685	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-8	4163	-8	-3667	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACACAAAACTTTAATG	NA	False	NA	NA	False	AATAAA	-31	NA	40883140	40902228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
Isoform_34984_3	chr19	+	4666	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	46	-929	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATTTAAAGAAATTC	NA	False	NA	NA	False	NA	NA	NA	41471121	41574046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
Isoform_34985_349	chr19	+	1776	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	4	-5	4	5	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTGTGTCTGTG	4064	False	NA	5	True	AATAAA	-22	NA	41900365	41907104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_34987_1038	chr19	+	1705	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	74	-4	-41	4	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTGTGTCTGT	4134	False	NA	4	True	AATAAA	-21	NA	41900435	41907103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_34988_49	chr19	+	1831	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-59	3	-59	-3	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTACTGTTTGTCTTG	4001	False	NA	-3	True	AATAAA	-14	NA	41900302	41907096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
Isoform_3499_3	chr10	+	2047	16	ISM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	6	3067	-2	-595	5prime_fragment	FALSE	canonical	3	170	junction_14	15.3356519986019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTGCTTCTGTCTCTG	4998	False	NA	NA	False	NA	NA	NA	81128819	81151021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825
Isoform_34996_11	chr19	+	1908	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	121.95691862293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4132	False	NA	10	True	AATAAA	-16	NA	41921921	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_34997_28	chr19	+	1868	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4132	False	NA	10	True	AATAAA	-16	NA	41921921	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_34998_165	chr19	+	1803	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	10	8	10	1	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4149	False	NA	10	True	AATAAA	-16	NA	41921938	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_34999_4	chr19	+	2718	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	11	1	intron_retention	FALSE	canonical	3	397	junction_4	20.8439232344218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4150	False	NA	10	True	AATAAA	-16	NA	41921939	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_35_5	ERCC-00034	+	1001	1	FSM	ERCC-00034A	DQ855001	1003	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00034_+_0_1000
Isoform_350_577	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
Isoform_3500_3	chr10	+	4333	19	FSM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	-19	9	-2	-8	multi-exon	FALSE	canonical	2	3	junction_17	62.7837755246991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAACAGCTCCTCTCC	4998	False	NA	NA	False	AATAAA	-7	NA	81128819	81155798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153159_81153238_81153599
Isoform_35000_3	chr19	+	1905	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	120.241631725455	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4132	False	NA	10	True	AATAAA	-16	NA	41921921	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_35001_4	chr19	+	1720	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	121.178422171606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATGTAGCTTCTCT	4130	False	NA	10	True	AATAAA	-16	NA	41921919	41932535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_41922105_41923278_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
Isoform_35002_107	chr19	+	1784	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-250	-5	-250	5	multi-exon	FALSE	canonical	3	94	junction_1	5.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACATGACTTCCTGTTT	NA	False	NA	15	True	AATAAA	-21	NA	41969951	42023087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41970448_42020327_42020556_42022027
Isoform_35003_16	chr19	+	1982	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-455	2	-455	-2	multi-exon	FALSE	canonical	3	94	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTAGCACATGACTT	NA	False	NA	8	True	AATAAA	-14	NA	41969746	42023080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_41970448_42020327_42020556_42022027
Isoform_35007_3	chr19	+	3636	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-31	-1	-30	1	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACACATTTCTGTGGA	NA	False	NA	76	True	GATAAA	-15	NA	42078878	42110527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_35008_95	chr19	+	3548	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	0	56	0	0	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078909	42110470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_3501_66	chr10	+	4256	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	11	-1716	3	-2	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTCCTCTCCGGTGAC	5003	False	NA	NA	False	AATAAA	-13	NA	81128824	81155804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
Isoform_35011_6	chr19	+	3585	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-44	63	-43	-1	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGACCTCTCTGTCCAG	NA	False	NA	12	True	TTTAAA	-30	NA	42078865	42110463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
Isoform_35012_4	chr19	+	1925	10	FSM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	14	0	-10	0	multi-exon	FALSE	canonical	3	49	junction_9	126.842081267405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078922	42110470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
Isoform_35014_23	chr19	+	3545	9	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_7	148.43159198769	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078909	42110469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104947_42105006_42108231
Isoform_35019_7	chr19	+	2791	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	269	6	-39	-6	multi-exon	FALSE	canonical	3	88	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTGGGTCTCAC	NA	False	NA	23	True	AATAAA	-15	NA	42136107	42140136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42137999_42139236
Isoform_35020_94	chr19	+	2584	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-10	-1	-10	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159022	42180157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_35021_5	chr19	+	2535	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	56.3670116291435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTCAGGTCTCC	NA	False	NA	6	True	AATAAA	-13	NA	42159022	42180155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177960_42178043_42178821
Isoform_35022_213	chr19	+	2694	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTCAGGTCTCC	NA	False	NA	6	True	AATAAA	-13	NA	42159027	42180155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_35025_5	chr19	+	4309	11	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	125	junction_1	17.592327873252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTCAGGTCTCC	NA	False	NA	6	True	AATAAA	-13	NA	42159027	42180155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
Isoform_35027_37	chr19	+	3110	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	27	975	-12	358	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTATGGTGTTTATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	42507224	42579807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
Isoform_35029_6	chr19	+	1474	9	FSM	ENSMUSG00000025192.14	ENSMUST00000144314.2	1829	9	-28	383	3	-383	multi-exon	FALSE	canonical	2	6	junction_1	3.11247489949718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAGAGTGCCTTTAAA	2779	False	NA	NA	False	ATTAAA	-19	NA	43678250	43710630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187
Isoform_35030_13	chr19	+	3015	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	138	2758	1	-2758	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGTTTTTTGTTTG	2777	False	NA	NA	False	AATAAA	-18	NA	43678248	43719378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
Isoform_35032_12	chr19	+	1247	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9260	False	NA	16	True	AATAAA	-19	NA	43741522	43757077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
Isoform_35033_3	chr19	+	1177	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	127	-6	-14	-1	multi-exon	FALSE	canonical	3	9	junction_5	8.4400459121974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGTCTCAGGTTCTTT	9299	False	NA	15	True	AATAAA	-18	NA	43741561	43757076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
Isoform_35034_4	chr19	+	1059	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12289	1995	12289	3	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAAATTCTCCTGTTCT	722	False	NA	10	True	ATTAAA	-28	NA	44203996	44230460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
Isoform_35035_9	chr19	+	746	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-84	-7	-84	7	multi-exon	FALSE	canonical	3	31	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTCCTGTTCTTAGT	NA	False	NA	14	True	ATTAAA	-32	NA	44226169	44230464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44226317_44226814_44227048_44230098
Isoform_35036_1030	chr19	+	5033	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	419	3	17	-3	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTCGTGGTGTTTTG	1486	False	NA	19	True	AATAAA	-20	NA	44282531	44295300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
Isoform_35039_17	chr19	+	5077	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	375	3	-27	-3	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTCGTGGTGTTTTG	1442	False	NA	19	True	AATAAA	-20	NA	44282487	44295300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
Isoform_3504_86	chr10	+	4183	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	23	2	-2	-2	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTCCTCTCCGGTGAC	4998	False	NA	NA	False	AATAAA	-13	NA	81128819	81155804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
Isoform_35045_17	chr19	+	1556	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	387	3512	-15	-626	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGACAGCTCTTCCTTCT	1454	False	NA	21	True	NA	NA	NA	44282499	44291791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
Isoform_35057_15	chr19	+	6194	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	2	-2	-2	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATGTGACTTATTTA	NA	False	NA	9	True	NA	NA	NA	44551286	44564711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
Isoform_3506_889	chr10	+	2596	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	117	2	117	-2	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGCTTCTGATCTGAGT	5586	False	NA	14	True	AATAGA	-13	NA	81157053	81162074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
Isoform_35064_9	chr19	+	1207	5	ISM	ENSMUSG00000036097.9	ENSMUST00000236895.2	6180	20	3	41071	0	9490	5prime_fragment	FALSE	canonical	3	167	junction_3	11.4345966260293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGAGAGTCCTTTCT	1055	False	NA	NA	False	NA	NA	NA	44919601	44929983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897
Isoform_35066_3	chr19	+	6335	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-14	-72	-14	-39	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	1029	False	NA	65	True	NA	NA	NA	44919575	44971699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
Isoform_35067_5	chr19	+	6076	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	12	161	0	-161	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAACTGTTTGCCTT	1055	False	NA	20	True	ATTAAA	-20	NA	44919601	44971466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
Isoform_35068_6	chr19	+	4377	15	FSM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	169	2	9	1	multi-exon	FALSE	canonical	1	6	junction_7	2.98037800643215	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGAGTGTCTGCTTG	NA	False	NA	2	True	AATAAA	-16	NA	44977708	44991834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
Isoform_35069_6	chr19	+	2192	5	FSM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	-1	4	-1	-4	multi-exon	FALSE	canonical	3	8	junction_1	67.8122407829147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCGTTTTTT	1657	False	NA	22	True	AATGAA	-15	NA	44994100	45001197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44994627_44997718_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_3507_12	chr10	+	2886	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	-175	4	-175	-4	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCTTCTGATCTGA	5294	False	NA	12	True	AATAGA	-11	NA	81156761	81162072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
Isoform_35071_97	chr19	+	3543	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-55	0	-55	0	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2498	False	NA	26	True	AATGAA	-19	NA	44994941	45001201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_35073_3	chr19	+	4445	4	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	840	2	-55	-2	3prime_fragment	FALSE	canonical	3	153	junction_1	12.2836838484589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGCGTTTTTTCT	2498	False	NA	24	True	AATGAA	-17	NA	44994941	45001199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_44997960_44998570_44998679_44998856_44998999_45000022
Isoform_35074_7	chr19	+	2762	5	NIC	ENSMUSG00000035342.15	novel	789	4	NA	NA	7	34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.1443684199946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	808	False	NA	NA	False	NA	NA	NA	45002859	45015503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_45002985_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35075_58	chr19	+	2745	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	5	48	5	33	multi-exon	FALSE	canonical	3	23	junction_1	54.407605166925	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTGCAATG	1592	False	NA	NA	False	NA	NA	NA	45003643	45015502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35077_88	chr19	+	2739	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	317	6	-18	-6	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGGAAAAAAATTTAAAA	1569	False	NA	NA	False	NA	NA	NA	45003620	45015463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35078_95	chr19	+	2756	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	340	-34	5	34	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	1592	False	NA	NA	False	NA	NA	NA	45003643	45015503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_3508_14	chr10	+	2398	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	121	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	59.2982774984714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5590	False	NA	13	True	AATAGA	-12	NA	81157057	81162073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160702_81160823_81160923_81161211_81161297
Isoform_35080_98	chr19	+	2686	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	-30	38	26	34	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	121	False	NA	NA	False	NA	NA	NA	45006620	45015503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35083_40	chr19	+	2743	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	-86	37	-30	35	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGCAATGGA	65	False	NA	NA	False	NA	NA	NA	45006564	45015504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35085_10	chr19	+	2913	12	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	27	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	31.0847947204082	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATCTTCAGTTATTC	NA	False	NA	6	True	AATAAA	-17	NA	45036041	45044820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043_45044220_45044243
Isoform_35086_3	chr19	+	2606	12	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	31.0847947204082	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCAGCAGCCCGTCTCTT	NA	False	NA	2	True	NA	NA	NA	45036047	45044523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043_45044220_45044247
Isoform_35087_4	chr19	+	2435	12	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	31.0847947204082	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCAGCAGCCCGTCTCTT	NA	False	NA	2	True	NA	NA	NA	45036226	45044523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043_45044270_45044289
Isoform_35088_4	chr19	+	2264	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTCTCTTGCTTTGCCG	NA	False	NA	18	True	TATAAA	-20	NA	45352226	45517733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_35089_4	chr19	+	2251	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	7	720	1	0	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352196	45517732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_35090_3	chr19	+	2178	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATCTCTCTTGCTTTGC	NA	False	NA	16	True	TATAAA	-18	NA	45352190	45517731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
Isoform_35091_107	chr19	+	804	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	18	531	-2	213	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGACTGCCCCTTTCT	3710	False	NA	15	True	AGTAAA	-22	NA	45549071	45566195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
Isoform_35092_23	chr19	+	794	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-3	213	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGACTGCCCCTTTCT	3709	False	NA	15	True	AGTAAA	-22	NA	45549070	45566195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
Isoform_35093_3	chr19	+	5110	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_35094_7	chr19	+	5118	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	2	combination_of_known_junctions	TRUE	canonical	3	238	junction_7	79.6883723412051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045000	46061242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_35095_7	chr19	+	5116	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	23	107	-19	3	multi-exon	FALSE	canonical	3	236	junction_7	80.0611452719015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_35097_8	chr19	+	2338	10	ISM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	8243	110	-3052	0	3prime_fragment	FALSE	canonical	3	236	junction_3	88.0661928380446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46053220	46061240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
Isoform_351_647	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
Isoform_35103_6	chr19	+	2491	13	FSM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	-49	-1	-1	1	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	214	False	NA	15	True	ATTAAA	-15	NA	46064378	46072901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35106_9	chr19	+	2444	13	FSM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	43	491	-5	1	multi-exon	FALSE	canonical	0	0	junction_11	314.758494281286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	-1	True	NA	15	True	ATTAAA	-15	NA	46064422	46072901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35121_45	chr19	+	2442	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTTGTGATTTTCA	-1	True	NA	13	True	ATTAAA	-13	NA	46064422	46072899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35123_8	chr19	+	3529	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	238	False	NA	10	True	AATAAA	-13	NA	46064402	46073966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35124_13	chr19	+	3490	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCAGAGTTATGTCG	20	False	NA	12	True	AATAAA	-15	NA	46064443	46073968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35126_10	chr19	+	2580	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	122	False	NA	15	True	ATTAAA	-15	NA	46064286	46072901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35136_6	chr19	+	2577	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-122	1068	-15	1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	122	False	NA	15	True	ATTAAA	-15	NA	46064286	46072901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35139_40	chr19	+	2441	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	14	1068	-5	1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	-1	True	NA	15	True	ATTAAA	-15	NA	46064422	46072901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35141_8	chr19	+	3552	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-30	1	-1	1	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCAGAGTTATGTCG	214	False	NA	12	True	AATAAA	-15	NA	46064378	46073968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
Isoform_35146_3	chr19	+	6404	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	14.1633654350608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTCCCGCTGATT	9082	False	NA	16	True	AATAAA	-16	NA	46140978	46274946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
Isoform_35147_3	chr19	+	6418	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	31	1	-8	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9082	False	NA	18	True	AATAAA	-18	NA	46140978	46274948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
Isoform_35148_72	chr19	+	2990	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-15	4	-15	-4	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACAGCAACCCCAATGT	NA	False	NA	19	True	AATAAA	-24	NA	46293167	46300457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_35149_15	chr19	+	3043	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-59	-5	-59	0	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAATGTGCTGCCCAT	NA	False	NA	28	True	AATAAA	-33	NA	46293123	46300466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_3515_4	chr10	+	1783	3	FSM	ENSMUSG00000034881.9	ENSMUST00000105325.4	1765	3	2	-20	2	20	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCCTGTGTCCATTCG	3848	False	NA	NA	False	AATAAA	-35	NA	81164566	81171026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81164752_81168225_81169090_81170292
Isoform_35150_7	chr19	+	3330	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	1	-352	1	-11	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46293183	46300813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_35151_33	chr19	+	3147	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	-5	-1	-5	1	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAATGTGCTGCCCATC	NA	False	NA	29	True	AATAAA	-34	NA	46294129	46300467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
Isoform_35152_5	chr19	+	1259	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	-19	3	-16	-3	multi-exon	FALSE	canonical	0	0	junction_1	11.8004237212059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCGTGGTGCATAGG	6297	False	NA	5	True	AATAAA	-14	NA	46316606	46318881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
Isoform_35153_30	chr19	+	1344	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	3	1	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.08248290463863	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6316	False	NA	8	True	AATAAA	-17	NA	46316625	46318884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
Isoform_35156_416	chr19	+	2236	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	43	-1	-12	1	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_35157_20	chr19	+	2064	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	-12	-1	-12	1	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
Isoform_35159_10	chr19	+	2151	8	NIC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	79.7222218271745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4243	False	NA	14	True	AGTAAA	-14	NA	46345363	46363692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46345424_46354749_46354993_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_3516_4	chr10	+	1420	7	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	78	3158	17	1835	intron_retention	FALSE	canonical	3	217	junction_4	21.4430771009096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGGGCAGTTCGTTTA	900	False	NA	NA	False	NA	NA	NA	81193402	81198901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521
Isoform_35161_7	chr19	+	2541	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9981212905332	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4241	False	NA	14	True	AGTAAA	-14	NA	46345361	46363692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46345424_46350670_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
Isoform_35163_9	chr19	+	1810	7	ISM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	8	32013	8	-8	5prime_fragment	FALSE	canonical	3	32	junction_6	24.709422404329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAATACCTGACTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	46385364	46442474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597
Isoform_35164_12	chr19	+	4523	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	-22	-2754	0	-2	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTTGTGTGCTTCTTT	NA	False	NA	17	True	ATTAAA	-17	NA	46385334	46477241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_35166_11	chr19	+	1844	7	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-132	22914	-2	-3	5prime_fragment	FALSE	canonical	3	63	junction_6	13.5123400391395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTGACTTGGTTTAC	NA	False	NA	NA	False	AATAAA	-20	NA	46385332	46442479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600
Isoform_35167_3	chr19	+	2761	10	FSM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-96	16	12	-16	multi-exon	FALSE	canonical	3	63	junction_6	13.1101694577102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGGTAACGTTAGATT	NA	False	NA	NA	False	TATAAA	-16	NA	46385368	46465377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946
Isoform_35168_5	chr19	+	4537	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	-16	1	-16	-1	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGTGTGCTTCTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	46385318	46477242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_35169_14	chr19	+	4443	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	77	2	-31	-2	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTTGTGTGCTTCTTT	NA	False	NA	17	True	ATTAAA	-17	NA	46385411	46477241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
Isoform_35173_367	chr19	+	3428	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-248	400	-248	-400	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGCACAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	46489892	46504887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
Isoform_3518_190	chr10	+	3918	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	51	2	-10	-2	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	873	False	NA	28	True	AATAAA	-19	NA	81193375	81202057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
Isoform_35180_17	chr19	+	3462	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-282	400	-282	-400	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGCACAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	46489858	46504887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
Isoform_35193_6	chr19	+	1299	11	ISM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	25	4205	25	2140	5prime_fragment	FALSE	canonical	3	36	junction_10	6.8622153857191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTCATGCTCTGG	NA	False	NA	NA	False	TTTAAA	-25	NA	46561830	46581129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738
Isoform_35194_42	chr19	+	1582	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	-2	1625	0	-1625	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	46561803	46583709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
Isoform_35195_3	chr19	+	1448	11	NIC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	33	-1625	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.4692777981487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	46561838	46583709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46561899_46570922_46571103_46571245_46571417_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
Isoform_35197_45	chr19	+	3905	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.2174798466343	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGCCGCTCCTTGTT	NA	False	NA	23	True	AATAAA	-24	NA	46587541	46645827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403_46644694_46644716
Isoform_35198_47	chr19	+	3869	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	57.2174798466343	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGCCGCTCCTTGTT	NA	False	NA	23	True	AATAAA	-24	NA	46587575	46645827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403_46644714_46644738
Isoform_3520_46	chr10	+	3940	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	29	2	29	-2	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	851	False	NA	28	True	AATAAA	-19	NA	81193353	81202057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
Isoform_35200_3	chr19	+	3798	7	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.2606385588173	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGCCGCTCCTTGTT	NA	False	NA	23	True	AATAAA	-24	NA	46587575	46645827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46587615_46587685_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403_46644714_46644738
Isoform_35202_31	chr19	+	3846	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	53	1	13	-1	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGCCGCTCCTTGTT	NA	False	NA	23	True	AATAAA	-24	NA	46587575	46645827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
Isoform_35203_7	chr19	+	2726	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	6	1168	6	-1161	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAGTCTACACAGTG	NA	False	NA	89	True	NA	NA	NA	46587528	46644660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
Isoform_35204_8	chr19	+	2638	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	19	1243	-10	-1236	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACAGACCCGAGGCTG	NA	False	NA	14	True	AATAAA	-28	NA	46587541	46644585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
Isoform_35205_24	chr19	+	683	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	8	1485	8	-1485	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAAGGTACCTC	9079	False	NA	NA	False	AATAAA	-20	NA	46678352	46690336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
Isoform_35208_3	chr19	+	589	5	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	-3	31365	-3	-515	5prime_fragment	FALSE	canonical	3	174	junction_4	14.0801278403287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTATATGTTACTACTT	5971	False	NA	NA	False	AGTAAA	-17	NA	46695893	46698169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985
Isoform_35209_129	chr19	+	1736	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	5974	False	NA	30	True	AATAAA	-40	NA	46695896	46729534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_35211_4	chr19	+	1422	9	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	11	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	60.665064081397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATAATTGATACCACAAT	5985	False	NA	15	True	AATAAA	-25	NA	46695907	46729519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_35212_3	chr19	+	1723	10	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	220	12	1	-4	3prime_fragment	FALSE	canonical	3	159	junction_5	17.1859833786536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGATACCACAATGGA	6194	False	NA	18	True	AATAAA	-28	NA	46696116	46729522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_35214_4	chr19	+	1779	9	FSM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	-64	4	-14	0	multi-exon	FALSE	canonical	3	159	junction_4	13.865424623862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	6420	False	NA	30	True	AATAAA	-40	NA	46696342	46729534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
Isoform_35217_16	chr19	+	3069	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1833	44	-3	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGATCATGTTTTTG	NA	False	NA	26	True	TTTAAA	-22	NA	46750087	46866798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35218_26	chr19	+	3001	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1901	44	-71	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750087	46866730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35219_18	chr19	+	3139	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	204	1612	195	1	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46750238	46867019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35220_33	chr19	+	2854	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	200	1901	191	-71	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750234	46866730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35221_20	chr19	+	3034	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	20	1901	11	-71	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750054	46866730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35222_11	chr19	+	3289	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	44	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.2034510155206	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46750087	46867019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860160_46865646_46865832_46866271
Isoform_35224_12	chr19	+	3139	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	-10	1826	-10	4	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGTTTTTGTTTCTAA	NA	False	NA	33	True	TTTAAA	-29	NA	46750024	46866805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35225_6	chr19	+	3335	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	7	1613	-1	0	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	13	True	AAGAAA	-15	NA	46750041	46867018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
Isoform_35226_4	chr19	+	2853	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	181	17	180	-17	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATGTTTTTTTCCAAG	NA	False	NA	12	True	TTTAAA	-8	NA	46750223	46866784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_35227_10	chr19	+	2784	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	196	71	195	-71	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750238	46866730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_35228_7	chr19	+	3005	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	-23	69	-15	-69	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTATCGTTTCTTTCA	NA	False	NA	15	True	AATAGA	-21	NA	46750019	46866732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_3523_9	chr10	+	1658	4	ISM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	11	1	11	-1	intron_retention	FALSE	canonical	3	742	junction_3	22.6862660362314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220272	81224185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073
Isoform_35230_4	chr19	+	3059	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	-11	3	-3	-3	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGATCATGTTTTTG	NA	False	NA	26	True	TTTAAA	-22	NA	46750031	46866798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_35231_4	chr19	+	3098	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	171	-218	170	1	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46750213	46867019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_35233_19	chr19	+	2681	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	559	0	559	0	multi-exon	FALSE	canonical	3	49	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGACTCGTGCTCTGTGGT	NA	False	NA	12	True	ATTAAA	-15	NA	47003695	47013766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47004259_47010271_47010397_47011773
Isoform_35236_5	chr19	+	3256	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	-17	1	-17	-1	multi-exon	FALSE	canonical	3	49	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGACTCGTGCTCTGTGG	NA	False	NA	11	True	ATTAAA	-14	NA	47003119	47013765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47004259_47010271_47010397_47011773
Isoform_3524_685	chr10	+	1429	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	14	1	14	-1	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220275	81224185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
Isoform_35241_42	chr19	+	3252	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	5	3	5	-3	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTATTGTACAAATTGA	NA	False	NA	12	True	AATAAA	-24	NA	47056189	47071915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
Isoform_35244_4	chr19	+	3091	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	71.9305220334178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056186	47071916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
Isoform_35248_16	chr19	+	6042	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-2	721	-2	-107	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGTGTGTGTGTAAA	NA	False	NA	24	True	NA	NA	NA	47079204	47119583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
Isoform_35250_37	chr19	+	3199	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11418	0	11418	0	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228767	47247874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
Isoform_35252_4	chr19	+	2555	3	NIC	ENSMUSG00000006435.17	novel	3606	6	NA	NA	11372	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	55.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228721	47247874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_47229111_47245150_47245298_47245855
Isoform_35253_55	chr19	+	2547	3	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	24517	0	24517	0	3prime_fragment	FALSE	canonical	3	77	junction_1	18.5	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	1530	False	NA	34	True	AATAAA	-16	NA	47241866	47247874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_47242248_47245150_47245298_47245855
Isoform_35257_7	chr19	+	1817	5	ISM	ENSMUSG00000025060.16	ENSMUST00000051691.8	4239	19	35190	21502	-5461	-4401	internal_fragment	FALSE	canonical	3	226	junction_3	48.996811120725	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTCTGGGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	47603647	47609392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041
Isoform_3526_15	chr10	+	1431	5	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	318.019653480724	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220321	81224185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073_81223315_81223540
Isoform_35261_81	chr19	+	1475	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	78	-55	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	13	True	ATTAAA	-19	NA	47720198	47723972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
Isoform_35266_155	chr19	+	1109	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	68	5	0	-4	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAGTCCAAACCAC	8536	False	NA	16	True	ATTAAA	-25	NA	47843476	47853224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_35269_15	chr19	+	1280	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	-102	4	-102	-3	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAGTCCAAACCACC	8366	False	NA	17	True	ATTAAA	-26	NA	47843306	47853225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_3527_10	chr10	+	1482	5	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	318.019653480724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220270	81224185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073_81223315_81223540
Isoform_35272_5	chr19	+	1063	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	-154	273	-154	-50	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTGGCTCCTTTCT	8314	False	NA	8	True	NA	NA	NA	47843254	47852956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
Isoform_35274_4	chr19	+	1318	9	FSM	ENSMUSG00000025069.16	ENSMUST00000056159.11	1351	9	11	22	1	4	multi-exon	FALSE	canonical	0	0	junction_7	0.992156741649222	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGTCTAATTATCACG	107	False	NA	NA	False	AATAAA	-14	NA	47854216	47874741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_47854369_47858124_47858200_47858647_47858763_47860092_47860243_47860454_47860564_47863268_47863492_47864834_47864937_47873094_47873202_47874456
Isoform_35280_34	chr19	+	4226	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-178	6	0	-6	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGCATTTGGTATAA	2523	False	NA	2	True	AATAAA	-11	NA	53131226	53235512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
Isoform_35288_17	chr19	+	2621	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	6	0	6	0	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	NA	False	NA	18	True	AATAAA	-23	NA	53298954	53361724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_35291_48	chr19	+	2461	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	18	-139	18	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4432	False	NA	18	True	AATAAA	-23	NA	53317861	53361724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_35292_94	chr19	+	2426	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	53	-139	5	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4467	False	NA	18	True	AATAAA	-23	NA	53317896	53361724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_35297_13	chr19	+	2436	6	NNC	ENSMUSG00000025025.15	novel	2340	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.9813313971293	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4455	False	NA	18	True	AATAAA	-23	NA	53317884	53361724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_53318152_53319783_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
Isoform_35298_39	chr19	+	2408	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	36	29	36	-29	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAACAAAAAAAAAAAA	NA	False	NA	50	True	NA	NA	NA	53517575	53530833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
Isoform_35300_4	chr19	+	2454	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	-15	34	-15	-34	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATAACAAAAAAA	NA	False	NA	45	True	NA	NA	NA	53517524	53530828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
Isoform_3531_431	chr10	+	1269	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-56	198	-50	107	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	1	True	NA	18	True	AATAAA	-18	NA	81395271	81401998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_35313_18	chr19	+	4160	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	7	684	7	341	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTGTTGCTTTCAGTT	NA	False	NA	73	True	ATTAAA	-16	NA	53588835	53633580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
Isoform_35315_3	chr19	+	2466	9	ISM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	65	21615	65	-21615	5prime_fragment	FALSE	canonical	1	3	junction_1	1.5612494995996	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGTAAAACCAAGAGAG	4806	False	NA	NA	False	NA	NA	NA	53665801	53832196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653
Isoform_35318_14	chr19	+	2431	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	-59	9	-59	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	409	False	NA	13	True	AATAAA	-18	NA	53891670	53918282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
Isoform_35319_38	chr19	+	2320	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	52	9	-24	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	520	False	NA	13	True	AATAAA	-18	NA	53891781	53918282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
Isoform_3532_734	chr10	+	1219	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-6	198	0	107	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	51	False	NA	18	True	AATAAA	-18	NA	81395321	81401998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_35326_59	chr19	+	2612	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	539	1092	539	950	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55242339	55285060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_35327_17	chr19	+	2893	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	256	1094	256	948	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGCCTGCAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55242056	55285058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_35329_3	chr19	+	537	3	ISM	ENSMUSG00000024983.11	ENSMUST00000225051.2	2919	4	-62	4065	0	-4065	5prime_fragment	FALSE	canonical	3	111	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGATGAGCAGCAGATC	NA	False	NA	NA	False	ATTAAA	-21	NA	55304726	55317005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_55304977_55310370_55310430_55316777
Isoform_3533_153	chr10	+	1446	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-36	1	-30	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTGTGTCCCTGCTTC	21	False	NA	13	True	AATAAA	-15	NA	81395291	81402195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_35330_3	chr19	+	2790	6	NIC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	9	1414	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.5042855124657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTGAACTCAGAACT	NA	False	NA	NA	False	AATAAA	-21	NA	55304735	55436825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55434609
Isoform_35332_11	chr19	+	3433	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-70	42	-14	-42	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCAGAATCAAAAGCAATT	NA	False	NA	3	True	AATAAA	-16	NA	55304712	55614951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
Isoform_35333_17	chr19	+	865	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-56	2596	0	-2596	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGGTCACATGAATCA	NA	False	NA	NA	False	GATAAA	-33	NA	55304726	55612397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
Isoform_35335_11	chr19	+	993	2	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	-14085	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACAGTGGTTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	55304726	55306985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_55304977_55306242
Isoform_35336_55	chr19	+	2387	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-39	2	-39	-2	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTGACTGGTCCGGTC	NA	False	NA	12	True	AATAAA	-45	NA	56385521	56430774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
Isoform_35338_3	chr19	+	1474	5	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	194	27012	194	-15153	5prime_fragment	FALSE	canonical	3	84	junction_1	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAATAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	56536886	56564923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586
Isoform_35339_74	chr19	+	2537	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	203	5851	203	-5851	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACAAATTTCTTCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	56536895	56586084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_3534_265	chr10	+	1417	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-6	0	0	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	51	False	NA	14	True	AATAAA	-16	NA	81395321	81402196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
Isoform_35342_19	chr19	+	3639	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	272	4680	272	-4680	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	56536964	56587255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
Isoform_35347_3	chr19	+	5655	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	297	-1	-53	1	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACATTGTCGTATAT	NA	False	NA	3	True	AATAAA	-14	NA	57349408	57378019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
Isoform_35348_4	chr19	+	3248	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	267	2436	-83	-2436	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAATGTTCTTTTACT	NA	False	NA	NA	False	GATAAA	-29	NA	57349378	57375582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
Isoform_35352_6	chr19	+	5559	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	398	-6	48	6	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTCGTATATTTTTG	NA	False	NA	8	True	AATAAA	-19	NA	57349509	57378024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
Isoform_35354_35	chr19	+	3761	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	1	0	-1	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGAGTTCTTTGCAGTAA	NA	False	NA	17	True	AATAAA	-17	NA	57441370	57479436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
Isoform_35355_52	chr19	+	1664	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	2098	0	1890	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTCTCCTGCCTGTTC	NA	False	NA	10	True	TATAAA	-23	NA	57441370	57477339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
Isoform_35358_3	chr19	+	722	5	NNC	ENSMUSG00000025086.14	novel	2513	6	NA	NA	0	-9808	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	89.3602260516389	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAGATGTTGGATTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	57441370	57462250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57462023
Isoform_35359_5	chr19	+	850	5	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	-2	25282	-2	-25282	5prime_fragment	FALSE	canonical	0	0	junction_1	16.7089048115069	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGGTTTTGTTATGAG	NA	False	NA	NA	False	AATAAA	-19	NA	58500450	58516178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703
Isoform_35360_72	chr19	+	2348	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800028	60824666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_35362_16	chr19	+	2268	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	0	-1	0	1	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800028	60824666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_35363_174	chr19	+	2328	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-20	-1	0	1	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTACTTGATGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	60800028	60824666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
Isoform_35369_20	chr19	+	3880	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTGTGGTGTTT	3901	False	NA	23	True	TATAAA	-26	NA	53933279	54021564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_35372_3	chr19	+	4019	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-46	117	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAATGAAAATATATGAA	3879	False	NA	-17	True	AAAACA	-8	NA	53933257	54021681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_35373_9	chr19	+	3633	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-47	-4	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATTTGGATTTTTGCT	3878	False	NA	NA	False	ATTAAA	-16	NA	53933256	54021294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
Isoform_35375_8	chr19	+	3696	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTAATGTCACCTTTC	NA	False	NA	6	True	AATAAA	-18	NA	5738769	5752889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_35376_6	chr19	+	2412	11	NNC	ENSMUSG00000004054.10	novel	441	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	29.7471006990597	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAATGTAATGTCACC	NA	False	NA	2	True	AATAAA	-14	NA	5738749	5752885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_5738802_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
Isoform_35378_3	chr19	+	1674	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46167	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.2345546661307	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGCCAAGTCTGTCGT	NA	False	NA	14	True	AAGAAA	-16	NA	46807931	46867019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860160_46865646_46865832_46866271
Isoform_35379_4	chr19	+	1594	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46154	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGTGCCAAGTCTGTC	NA	False	NA	12	True	AAGAAA	-14	NA	46807944	46867017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
Isoform_3538_55	chr10	+	1216	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	51	False	NA	18	True	AATAAA	-18	NA	81395321	81401998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
Isoform_35380_6	chr19	+	5552	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-239	1	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	13.2338994508254	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214099	25411861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
Isoform_35384_14	chr19	+	2697	5	NNC	ENSMUSG00000035342.15	novel	398	3	NA	NA	375	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1443684199946	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	2151	False	NA	NA	False	NA	NA	NA	45004202	45015503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_45004263_45009825_45010276_45011980_45012644_45013157_45013419_45014240
Isoform_35387_8	chr19	+	1897	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-52	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCCCTTTGAACTGGT	5376	False	NA	7	True	CATAAA	-12	NA	8779866	8782205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_8779896_8780337
Isoform_3539_22	chr10	+	1412	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACTGTGTCCCTGCTT	51	False	NA	12	True	AATAAA	-14	NA	81395321	81402194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
Isoform_35391_6	chr19	+	2294	7	NNC	ENSMUSG00000025076.13	novel	1603	2	NA	NA	-319	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.8988794990677	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCCTGACTGGTCCGG	NA	False	NA	10	True	AATAAA	-43	NA	56385241	56430772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_56385379_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
Isoform_35393_3	chr19	+	573	3	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTATGTCTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	38337145	38338053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_38337292_38337531_38337604_38337698
Isoform_35394_5	chr19	+	2378	22	NNC	ENSMUSG00000024981.7	novel	455	3	NA	NA	-295	947	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	18.582902438493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGTGCCTGCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55241505	55285057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_55241534_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_35395_3	chr19	+	2416	22	NNC	ENSMUSG00000024981.7	novel	455	3	NA	NA	1452	950	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6677619895606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55243252	55285060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr19_+_55243316_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
Isoform_35397_12	chr19	-	236	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45799313	45799077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_45799100_45799300
Isoform_35399_4	chr4	-	210	2	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTTAAAAAAAAATTATAC	NA	False	NA	NA	False	NA	NA	NA	120856056	120755129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_120755138_120855854
Isoform_354_359	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_-_8991_13672
Isoform_35400_4	chr19	-	1302	1	Genic_Genomic	ENSMUSG00000039901.11	novel	NA	NA	NA	NA	-3	-75917	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACAAAACCCAAAAAA	6644	False	NA	NA	False	NA	NA	NA	45986930	45985628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_45985600_45986900
Isoform_35401_96	chr19	+	2674	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	-27	19	-27	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACTCACAGAGGTTTC	NA	False	NA	6	True	AATACA	-12	NA	45991919	45994593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45991900_45994600
Isoform_35402_173	chr19	+	2642	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	5	19	5	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACTCACAGAGGTTTC	NA	False	NA	6	True	AATACA	-12	NA	45991951	45994593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_45992000_45994600
Isoform_35404_9	chr15	+	208	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAGGACCTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	57954925	57955133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_57954900_57955100
Isoform_35409_8	chr19	-	1149	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9687	False	NA	NA	False	AATAGA	-28	NA	46491255	46490106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_46490100_46491300
Isoform_3541_34	chr10	+	1251	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-35	107	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	16	False	NA	18	True	AATAAA	-18	NA	81395286	81401998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
Isoform_35410_3	chr19	-	1594	1	NIC	ENSMUSG00000025035.10	novel	1005	7	NA	NA	33	-3666	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	46561604	46560010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_46560000_46561600
Isoform_35411_5	chr19	-	163	1	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAAAAAAAGT	1806	False	NA	NA	False	NA	NA	NA	47049063	47048900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_47048900_47049100
Isoform_35413_16	chr19	+	3263	1	NIC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	11424	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACCAAAAAA	NA	False	NA	NA	False	GATAAA	-35	NA	47228773	47232036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_47228800_47232000
Isoform_35415_4	chr19	-	2545	1	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	3	1343	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47525555	47523010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_47523000_47525600
Isoform_35416_3	chr19	-	233	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGTACACCAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	47595268	47595035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_47595000_47595300
Isoform_35419_4	chr19	+	167	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTGATGTG	6329	False	NA	NA	False	NA	NA	NA	53057745	53057912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_53057700_53057900
Isoform_35420_4	chr19	-	186	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAAACGAATGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	53402118	53401932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_53401900_53402100
Isoform_35422_3	chr19	-	196	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACTATTGAAGC	2268	False	NA	NA	False	NA	NA	NA	53586779	53586583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_53586600_53586800
Isoform_35423_4	chr16	-	177	1	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29584020	29583843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_29583800_29584000
Isoform_35425_8	chr19	-	2701	1	NIC	ENSMUSG00000024862.17	novel	2838	16	NA	NA	0	-1787	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5168325	5165624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5165600_5168300
Isoform_35426_4	chr19	+	2622	1	FSM	ENSMUSG00000035283.6	ENSMUST00000038949.6	2952	1	-118	448	-118	-448	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	7028	False	NA	NA	False	AAAACA	-10	NA	56710512	56713134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_56710500_56713100
Isoform_35427_19	chr19	-	526	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCCAAAAG	NA	False	NA	NA	False	CATAAA	-13	NA	57656400	57655874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_57655900_57656400
Isoform_35428_18	chr19	-	659	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCCAAAAG	NA	False	NA	NA	False	CATAAA	-13	NA	57656533	57655874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_57655900_57656500
Isoform_35429_66	chr19	+	468	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-54	-18	-54	18	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCC	NA	False	NA	NA	False	AATAAA	-15	NA	59310748	59311216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_59310700_59311200
Isoform_35430_7	chr7	+	369	1	FSM	ENSMUSG00000078087.6	ENSMUST00000183090.2	399	1	46	-16	46	16	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCACGTT	NA	False	NA	NA	False	AATAAA	-16	NA	55663809	55664178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55663800_55664200
Isoform_35434_4	chr19	+	2110	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-31	1849	-31	-1849	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTCTTGGTGGTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	60744393	60746503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_60744400_60746500
Isoform_35435_3	chr19	+	3382	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-9	555	-9	-555	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60744415	60747797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_60744400_60747800
Isoform_35436_5	chr19	+	1905	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	168	1855	168	-1855	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAACTCCCTCTTGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	60744592	60746497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_60744600_60746500
Isoform_35438_3	chr19	-	192	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	9958	False	NA	NA	False	NA	NA	NA	60864608	60864416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_60864400_60864600
Isoform_3544_24	chr10	+	929	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	30	-130	30	-3	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479666	81483438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
Isoform_35440_25	chr19	-	1658	1	Genic_Genomic	ENSMUSG00000118263.2	novel	NA	NA	NA	NA	-119	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9081	False	NA	-3	True	NA	NA	NA	5357563	5355905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_5355900_5357600
Isoform_35444_8	chr19	+	177	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATATAATAAATATT	1093	False	NA	NA	False	NA	NA	NA	5451350	5451527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_5451400_5451500
Isoform_35445_16	chr19	+	2577	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	0	407	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGACAAAAAAAAAAAAAA	247	False	NA	NA	False	NA	NA	NA	5475171	5477748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_+_5475200_5477700
Isoform_35446_3	chr19	+	538	1	FSM	ENSMUSG00000117771.2	ENSMUST00000237006.2	728	1	276	-86	276	86	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	6005	False	NA	NA	False	GATAAA	-25	NA	5486301	5486839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_5486300_5486800
Isoform_3545_32	chr10	+	780	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	10111	3	11	-3	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479647	81483438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_35451_28	chr19	-	1006	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	343	3366	-47	-3361	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAGCCTGGCCAGCTT	5284	False	NA	-7	True	AATAAA	-17	NA	5507579	5506573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5506600_5507600
Isoform_35456_11	chr19	+	193	1	ISM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	4553	1	4443	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5545035	5545228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr19_+_5545000_5545200
Isoform_35458_3	chr19	+	187	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	5680673	5680860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_5680700_5680900
Isoform_3546_5	chr10	+	989	4	ISM	ENSMUSG00000054708.18	ENSMUST00000154707.8	4635	18	9902	3	-198	-3	3prime_fragment	FALSE	canonical	3	46	junction_1	24.7521042876493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCAAGTCGCAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	81479438	81483438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_81479728_81482138_81482268_81482626_81482693_81482933
Isoform_35466_1395	chr19	-	885	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	1	6097	0	129	mono-exon	FALSE	NA	NA	NA	NA	NA	1395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGCAAGATAGAAAAAC	4062	False	NA	-6	True	AATAGA	-8	NA	5852699	5851814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5851800_5852700
Isoform_3547_8	chr10	+	747	5	NNC	ENSMUSG00000112160.2	novel	2726	4	NA	NA	-30	11707	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	9.08295106229247	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATTGTTTCCTTGCCTT	NA	False	NA	7	True	NA	NA	NA	81919156	81958757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572_81944605_81958320
Isoform_3548_7	chr10	+	3391	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-63	2	-2	-2	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGATGTTTATGTTG	NA	False	NA	1	True	AATAAA	-13	NA	82190086	82215468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
Isoform_35486_101	chr19	-	3177	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1041	-1984	-1041	1984	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCATGGCTGTT	10001	False	NA	-7	True	AATAAA	-20	NA	5895506	5892329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_5892300_5895500
Isoform_35487_11	chr19	-	177	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	8369	False	NA	NA	False	NA	NA	NA	5904474	5904297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_5904300_5904500
Isoform_35488_3	chr19	-	3107	1	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	15	-6883	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAATAAATAAATAA	4350	False	NA	NA	False	NA	NA	NA	5925287	5922180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_5922200_5925300
Isoform_35489_5	chr19	-	201	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTGTGGTGATGCAC	NA	False	NA	NA	False	NA	NA	NA	3638783	3638582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_3638600_3638800
Isoform_35490_3	chr19	-	1199	1	Antisense	novelGene_ENSMUSG00000075227.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAACCACCACCACCA	9712	False	NA	NA	False	AATAAA	-17	NA	6112162	6110963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_6111000_6112200
Isoform_35491_138	chr19	+	1286	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	-6	1	-6	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCAGTGCCTTTTCC	2527	False	NA	10	True	AATAAA	-21	NA	6111215	6112501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_6111200_6112500
Isoform_35495_11	chr19	+	178	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACAAGCC	1417	False	NA	NA	False	NA	NA	NA	6377965	6378143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_6378000_6378100
Isoform_35499_5	chr19	-	1181	1	Antisense	novelGene_ENSMUSG00000024949.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAACAAGTC	NA	False	NA	NA	False	AATATA	-9	NA	6427225	6426044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_6426000_6427200
Isoform_3550_243	chr10	+	2978	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	4	520	4	-45	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCGCAGTCTGAGCGT	NA	False	NA	NA	False	ATTAAA	-17	NA	82465696	82486113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_35501_12	chr15	+	178	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	39045856	39046034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_39045900_39046000
Isoform_35502_8	chr19	-	223	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACGACCAACATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	6730053	6729830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_6729800_6730100
Isoform_35503_26	chr19	-	189	1	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACTAGACTTGAGGAG	3013	False	NA	NA	False	NA	NA	NA	6867736	6867547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_6867500_6867700
Isoform_35505_3	chr19	-	783	1	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGGAATGAAATTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	7114158	7113375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_7113400_7114200
Isoform_35509_7	chr19	-	3926	1	FSM	ENSMUSG00000024764.11	ENSMUST00000235323.2	4520	1	0	594	0	-594	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	7218419	7214493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7214500_7218400
Isoform_35510_3	chr19	-	174	1	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATCTAATGCC	4685	False	NA	NA	False	NA	NA	NA	7228307	7228133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_7228100_7228300
Isoform_35511_4	chr19	-	1974	1	Antisense	novelGene_ENSMUSG00000024968.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	7246228	7244254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_7244300_7246200
Isoform_35517_3	chr19	-	190	1	Genic_Genomic	ENSMUSG00000024970.6	novel	NA	NA	NA	NA	20098	28	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACAGAGA	10005	False	NA	NA	False	NA	NA	NA	7331604	7331414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_7331400_7331600
Isoform_35518_25	chr19	-	1689	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	-53	-982	-53	982	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCCCACTCTGCTGCCT	6551	False	NA	NA	False	NA	NA	NA	7376495	7374806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_7374800_7376500
Isoform_35519_3	chr19	-	183	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTCTACAG	NA	False	NA	NA	False	NA	NA	NA	3787300	3787117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_3787100_3787300
Isoform_3552_5	chr10	+	3497	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	4	1	4	-1	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGCTAACTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	82465696	82486632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
Isoform_35520_7	chr19	+	1103	1	NIC	ENSMUSG00000024759.15	novel	437	3	NA	NA	-10	-13952	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7471752	7472855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_7471800_7472900
Isoform_35525_100	chr19	-	691	1	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	7	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTTCTTTAAAAAAAAAAA	NA	False	NA	-4	True	NA	NA	NA	8691236	8690545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_8690500_8691200
Isoform_35527_6	chr19	+	2956	1	FSM	ENSMUSG00000065087.3	ENSMUST00000083153.3	126	1	-2378	-452	-2378	452	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700851	8703807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_8700900_8703800
Isoform_35528_12	chr19	-	177	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3812066	3811889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_3811900_3812100
Isoform_35529_18	chr19	+	893	1	NIC	ENSMUSG00000117924.2	novel	748	2	NA	NA	7	-580	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6526	False	NA	NA	False	NA	NA	NA	8748366	8749259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_8748400_8749300
Isoform_35531_8	chr19	-	200	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8827317	8827117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_8827100_8827300
Isoform_35532_14	chr19	-	178	1	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8842808	8842630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_8842600_8842800
Isoform_35533_3	chr10	-	179	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66722524	66722345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_66722300_66722500
Isoform_35534_5	chr19	-	969	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	-736	-85	736	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAATCCAATGG	NA	False	NA	NA	False	NA	NA	NA	8866134	8865165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8865200_8866100
Isoform_35535_31	chr19	-	383	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	-150	-85	150	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCTGTGTTCGCTACC	NA	False	NA	-39	True	AATAAA	-15	NA	8866134	8865751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_8865800_8866100
Isoform_35540_19	chr19	+	1065	1	FSM	ENSMUSG00000067608.6	ENSMUST00000088040.6	781	1	-142	-142	-142	142	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTACTTTCTTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	9260601	9261666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_9260600_9261700
Isoform_3555_30	chr10	+	2975	10	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	4	-45	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	344.226023937115	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCGCAGTCTGAGCGT	NA	False	NA	NA	False	ATTAAA	-17	NA	82465696	82486113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
Isoform_35550_4	chr19	+	1949	1	Antisense	novelGene_ENSMUSG00000041488.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	11795949	11797898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_+_11795900_11797900
Isoform_35552_3	chr19	-	2038	1	Genic_Genomic	ENSMUSG00000082848.2	novel	NA	NA	NA	NA	-17	-51784	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	9387	False	NA	NA	False	NA	NA	NA	3902436	3900398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_3900400_3902400
Isoform_35554_8	chr19	+	985	1	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	3	-14851	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACGAAAAAAAAAAAAAA	5782	False	NA	NA	False	NA	NA	NA	3901834	3902819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_3901800_3902800
Isoform_35555_4	chr19	-	198	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	23211076	23210878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_23210900_23211100
Isoform_3556_8	chr10	+	3021	10	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-13	-47	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	344.226023937115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATGCGCAGTCTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	82465648	82486111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
Isoform_35560_3	chr4	-	178	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44109680	44109502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_44109500_44109700
Isoform_35562_3	chr19	-	201	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAATTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	19115140	19114939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_19114900_19115100
Isoform_35563_13	chr19	-	177	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	20900635	20900458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_20900500_20900600
Isoform_35565_10	chr19	+	1043	1	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	6	-7107	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAATATATAGGTCA	NA	False	NA	NA	False	NA	NA	NA	21249647	21250690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_21249600_21250700
Isoform_35567_7	chr19	-	164	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21801110	21800946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_21800900_21801100
Isoform_35570_10	chr19	+	527	1	FSM	ENSMUSG00000118353.2	ENSMUST00000235917.2	780	1	-110	363	-110	-363	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAAAGGCATG	NA	False	NA	6	True	NA	NA	NA	22418388	22418915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_22418400_22418900
Isoform_35571_3	chr19	-	4641	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	22705268	22700602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_22700901_22700925
Isoform_35573_17	chr19	-	2748	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	22705268	22702520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_22702500_22705300
Isoform_35575_13	chr19	-	2181	2	Genic_Genomic	ENSMUSG00000097930.3	novel	816	2	NA	NA	-7	-36339	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATAAATAAAAAA	4883	False	NA	NA	False	NA	NA	NA	23053295	23051092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_23051975_23051996
Isoform_35576_3	chr19	+	581	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACCTAATAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	23060425	23061006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_23060400_23061000
Isoform_35577_4	chr19	-	394	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	23064888	23064494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_23064500_23064900
Isoform_35578_36	chr19	-	169	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAGAAT	9993	False	NA	NA	False	NA	NA	NA	23065923	23065754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_23065800_23065900
Isoform_35579_4	chr19	-	4109	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	4775	False	NA	NA	False	NA	NA	NA	23071141	23067032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_23067000_23071100
Isoform_3558_73	chr10	+	2370	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	114	2953	-90	-1920	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATATGGATTCTT	NA	False	NA	14	True	AATAAA	-23	NA	82534954	82575309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
Isoform_35580_3	chr19	+	591	1	NIC	ENSMUSG00000044387.6	novel	414	2	NA	NA	217	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23112480	23113071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_23112500_23113100
Isoform_35583_51	chr19	+	643	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-13	3	-13	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAAGTTCGTGCTTT	NA	False	NA	NA	False	AAAAAG	-23	NA	23653198	23653841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_23653200_23653800
Isoform_35585_7	chr5	+	173	1	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATACT	668	False	NA	NA	False	NA	NA	NA	129919226	129919399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_129919200_129919400
Isoform_35586_3	chr19	-	1885	1	NIC	ENSMUSG00000059363.11	novel	1114	5	NA	NA	18	-16841	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24257951	24256066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_24256100_24258000
Isoform_35587_19	chr19	-	993	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-99	-39	-99	39	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24454819	24453826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_24453800_24454800
Isoform_35589_11	chr19	-	483	1	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	38	-13492	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	24938927	24938444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_24938400_24938900
Isoform_35590_5	chr19	-	2852	1	NIC	ENSMUSG00000024847.16	novel	1378	7	NA	NA	28	-440	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3930	False	NA	NA	False	NA	NA	NA	4171547	4168695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_4168700_4171500
Isoform_35591_4	chr11	-	175	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35750574	35750399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_35750400_35750600
Isoform_35593_3	chr19	+	368	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCACAACCACCACCAC	NA	False	NA	NA	False	NA	NA	NA	28750449	28750817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_28750400_28750800
Isoform_35594_8	chr19	+	2879	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	-33	13	-33	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAGGTGAAATCTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	28941319	28944198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28941300_28944200
Isoform_35595_9	chr19	+	1356	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	-4	1507	-4	-1507	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACAGATTTTTTTTCT	NA	False	NA	NA	False	AGTAAA	-23	NA	28941348	28942704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_28941300_28942700
Isoform_35596_10	chr19	+	1158	1	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	40	-41271	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGAGAAAAAAA	NA	False	NA	NA	False	GATAAA	-18	NA	29078814	29079972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_29078800_29080000
Isoform_35598_8	chr19	+	652	1	FSM	ENSMUSG00000068466.7	ENSMUST00000084171.7	645	1	-105	98	-105	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGGAGGAGGAAGAT	NA	False	NA	NA	False	AAAAAG	-29	NA	29137412	29138064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_29137400_29138100
Isoform_35599_3	chr19	-	2737	1	NIC	ENSMUSG00000097855.9	novel	1145	4	NA	NA	-208	-15803	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAAAAATTGTACC	770	False	NA	NA	False	TATAAA	-35	NA	29499602	29496865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_29496900_29499600
Isoform_3560_9	chr10	+	3484	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	4	9	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTGAGTGGTGCTCTG	NA	False	NA	24	True	AATAAA	-25	NA	82695044	82733555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_35600_3	chr19	-	4562	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	13	0	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790361	29785799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_29785800_29790400
Isoform_35602_3	chr19	+	241	1	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACTTGAGAGCAT	NA	False	NA	NA	False	AAAAAG	-41	NA	29922561	29922802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_29922600_29922800
Isoform_35604_232	chr19	+	3601	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	154	478	154	-478	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTTGTATGTTTCAT	NA	False	NA	14	True	AATAAA	-16	NA	31060390	31063991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_31060400_31064000
Isoform_35606_21	chr19	+	701	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAATA	5790	False	NA	NA	False	NA	NA	NA	31091337	31092038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_31091300_31092000
Isoform_35611_10	chr19	+	2284	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	-7	-1	-7	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATTAGATATTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	32463315	32465599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_32463300_32465600
Isoform_35612_7	chr19	+	1220	1	NIC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	32	-43997	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAATA	7723	False	NA	NA	False	AATGAA	-2	NA	32735026	32736246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_32735000_32736200
Isoform_35613_6	chr19	-	183	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTAAAGAAAGA	6297	False	NA	NA	False	NA	NA	NA	32751079	32750896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_32750900_32751100
Isoform_35614_11	chr19	+	909	1	Antisense	novelGene_ENSMUSG00000071573.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	33369218	33370127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_+_33369200_33370100
Isoform_35615_3	chr19	-	2725	1	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	193	-36402	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	34856662	34853937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_34853900_34856700
Isoform_35616_4	chr19	+	3047	1	NIC	ENSMUSG00000024800.9	novel	1634	6	NA	NA	4	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36061119	36064166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_36061100_36064200
Isoform_35617_8	chr19	+	3190	1	Genic_Genomic	ENSMUSG00000024811.12	novel	NA	NA	NA	NA	-8	-17599	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36811623	36814813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_+_36811600_36814800
Isoform_35618_3	chr19	+	188	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACCATGGTCTACTCA	NA	False	NA	NA	False	NA	NA	NA	53571973	53572161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_53572000_53572200
Isoform_35619_10	chr15	-	178	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79555844	79555666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_79555700_79555800
Isoform_35620_8	chr19	-	179	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTCAGCAT	NA	False	NA	NA	False	NA	NA	NA	4408534	4408355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_4408400_4408500
Isoform_35621_4	chr19	-	1740	1	Genic_Genomic	ENSMUSG00000056999.17	novel	NA	NA	NA	NA	-75	-57297	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACAGGGCTG	NA	False	NA	NA	False	ATTAAA	-3	NA	37340085	37338345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_37338300_37340100
Isoform_35623_4	chr19	-	1751	1	FSM	ENSMUSG00000102353.2	ENSMUST00000192635.2	1748	1	14	-17	14	17	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAACTCAAGTGAAATA	NA	False	NA	NA	False	AGTAAA	-19	NA	37423090	37421339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_37421300_37423100
Isoform_35624_6	chr18	-	195	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	88849851	88849656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_88849700_88849900
Isoform_35625_14	chr19	+	772	1	Genic_Genomic	ENSMUSG00000024989.16	novel	NA	NA	NA	NA	-6	-7010	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38043452	38044224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_+_38043500_38044200
Isoform_35627_10	chr19	-	1474	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGGAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	38314441	38312967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_38313000_38314400
Isoform_35628_8	chr19	+	212	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTTCATAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	38326715	38326927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_38326700_38326900
Isoform_35629_5	chr19	-	225	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	4528771	4528546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_4528500_4528800
Isoform_35630_3	chr19	+	178	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTATAAAAAGGATTGG	NA	False	NA	NA	False	NA	NA	NA	40261490	40261668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_40261500_40261700
Isoform_35632_321	chr19	-	2837	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1618	-697	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	40550199	40547362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_40547400_40550200
Isoform_35638_89	chr19	+	2777	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	-637	-1618	-637	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATGTATC	NA	False	NA	NA	False	AATAAA	-17	NA	40610266	40613043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_40610300_40613000
Isoform_35641_4	chr19	-	177	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGGCC	NA	False	NA	NA	False	NA	NA	NA	41411758	41411581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_41411600_41411800
Isoform_35643_49	chr16	+	1696	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-76	-651	-76	651	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	24348067	24349763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_+_24348100_24349800
Isoform_35644_12	chr19	+	806	1	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	41514593	41515399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_41514600_41515400
Isoform_35645_10	chr19	-	3853	1	FSM	ENSMUSG00000098346.3	ENSMUST00000184483.3	58	1	-1682	-2113	-1682	2113	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	4675665	4671812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_4671800_4675700
Isoform_35646_23	chr19	-	2136	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	20	5	20	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGGTCTTTGTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	41836551	41834415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_41834400_41836600
Isoform_35647_5	chr3	-	763	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	11079336	11078573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_11078600_11079300
Isoform_35648_5	chr3	-	463	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	11079038	11078575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_11078600_11079000
Isoform_35649_7	chr19	-	1600	1	NIC	ENSMUSG00000034321.15	novel	2296	6	NA	NA	-9	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	41921746	41920146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_-_41920100_41921700
Isoform_3565_570	chr10	+	3405	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-1	-1107	-1	0	multi-exon	FALSE	canonical	1	267	junction_3	142.059218034492	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695039	82733546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_35650_4	chr19	-	185	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTCAAA	5513	False	NA	NA	False	NA	NA	NA	41927784	41927599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_41927600_41927800
Isoform_35652_5	chr19	+	2597	1	NIC	ENSMUSG00000018820.14	novel	636	3	NA	NA	19	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	42159051	42161648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr19_+_42159100_42161600
Isoform_35653_3	chr19	+	175	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGGAACAAGCAGGGACT	8566	False	NA	NA	False	NA	NA	NA	42277256	42277431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_42277300_42277400
Isoform_35654_6	chr19	+	206	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCACAAACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42390431	42390637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_42390400_42390600
Isoform_35655_34	chr19	-	178	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43566956	43566778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_43566800_43567000
Isoform_35657_7	chr19	-	176	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAGAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	43895661	43895485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_43895500_43895700
Isoform_35658_11	chr19	-	247	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	3	-104	3	104	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTCATCAAGACTTCAA	4909	False	NA	-5	True	NA	NA	NA	44102560	44102313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_44102300_44102600
Isoform_3566_20	chr10	+	3448	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-44	-1107	-16	0	multi-exon	TRUE	canonical	1	267	junction_3	142.059218034492	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82694996	82733546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_3569_121	chr10	+	3298	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	27	0	-1	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695039	82733546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_35702_4	chr19	-	699	1	Genic_Genomic	ENSMUSG00000051984.14	novel	NA	NA	NA	NA	-2	-27524	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44534305	44533606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr19_-_44533600_44534300
Isoform_35704_5	chr19	-	217	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAACCTTGTTTCTTCA	6712	False	NA	NA	False	NA	NA	NA	45051608	45051391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_45051400_45051600
Isoform_35706_4	chr19	+	208	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAAGAACGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	45384786	45384994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_45384800_45385000
Isoform_3571_24	chr10	+	3325	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	0	0	0	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695012	82733546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_35710_22	chr1	-	1272	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	1439.42688595149	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTACTGAAGCTCCT	620	False	NA	-9	True	AATAAA	-12	NA	59709962	59678601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59691930_59692028_59694616_59694692_59709838
Isoform_35712_252	chr1	-	1081	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	31	103	-11	-103	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGATTCTGTTTGT	620	False	NA	-4	True	AATAAA	-32	NA	59709962	59678695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
Isoform_35713_1643	chr1	-	1128	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	78	9	-17	-9	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTACTGAAGCTCCT	667	False	NA	-9	True	AATAAA	-12	NA	59709915	59678601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
Isoform_35716_164	chr1	-	1639	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	8358	15	-1275	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137052	60117301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_35718_17	chr1	-	2189	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	7808	15	-725	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTTTGTTTTGTTTT	NA	False	NA	68	True	AGTAAA	-12	NA	60137052	60116751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_35722_8	chr1	-	2883	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	15	7114	15	-31	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGCAATAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	60137052	60116057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
Isoform_35730_6	chr1	-	1575	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	0	1275	0	-1275	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137305	60117301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
Isoform_35731_6	chr1	-	1972	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	451	828	-48	-828	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTCTACATTTTAC	NA	False	NA	-35	True	TATAAA	-21	NA	60137353	60116854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
Isoform_35734_50	chr1	-	1505	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1276	-29	-1276	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137334	60117302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
Isoform_35745_12	chr1	-	2079	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	52	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCTGGTTTTAAAGCT	NA	False	NA	-10	True	NA	NA	NA	60605872	60522348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
Isoform_35746_4	chr1	-	2284	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	-139	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCTGGTTTTAAAGCT	NA	False	NA	-10	True	NA	NA	NA	60606077	60522348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
Isoform_35748_3	chr1	-	1939	10	FSM	ENSMUSG00000040865.16	ENSMUST00000137511.8	1979	10	0	40	0	-26	multi-exon	FALSE	canonical	1	2	junction_9	2.18298696715428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACGAAGCCCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	63153493	63101348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63144814_63144919_63153369
Isoform_35749_63	chr1	-	2784	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	123	junction_19	206.17340683078	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTAAAGTGTGAAGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	63215840	63182752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
Isoform_35750_9	chr1	-	2906	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	11	2	intron_retention	FALSE	canonical	3	123	junction_19	206.17340683078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215970	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
Isoform_35752_8	chr1	-	2740	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGAAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	63215950	63182748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
Isoform_35753_99	chr1	-	2621	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215843	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
Isoform_35754_8	chr1	-	2748	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215970	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
Isoform_35755_126	chr1	-	2695	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	38	-143	-4	4	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTGTGAAGTTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	63215853	63182750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
Isoform_35756_14	chr1	-	2802	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	-79	-133	11	2	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215970	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
Isoform_35759_76	chr1	-	2635	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	20	6	-9	2	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215961	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
Isoform_35760_162	chr1	-	2516	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	139	6	7	2	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTGATATTAAAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	63215842	63182760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
Isoform_35764_4	chr1	-	1351	4	FSM	ENSMUSG00000025959.14	ENSMUST00000114086.8	7662	4	63	6248	54	6231	multi-exon	FALSE	canonical	3	7	junction_1	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAACAAAAGT	NA	False	NA	NA	False	NA	NA	NA	64160587	64074853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058
Isoform_35766_3	chr1	-	913	4	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-10	6231	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAACAAAAGT	NA	False	NA	NA	False	NA	NA	NA	64161451	64074853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64161360
Isoform_35769_7	chr1	-	2041	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCAGTGTTGTCTTCTG	NA	False	NA	0	True	ATTAAA	-20	NA	64656412	64645631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_35770_7	chr1	-	1968	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	56	6	-2	1	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACCTGTCAGTGTTGT	NA	False	NA	-6	True	ATTAAA	-14	NA	64656345	64645637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_35771_3	chr1	-	2561	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-537	6	-537	1	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACCTGTCAGTGTTGT	NA	False	NA	-6	True	ATTAAA	-14	NA	64656938	64645637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
Isoform_35774_20	chr1	-	677	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	30	4	-1	-4	multi-exon	FALSE	canonical	3	111	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAACAGTGCTACCT	7957	False	NA	-20	True	AATAAA	-17	NA	64729788	64719033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64719545_64729622
Isoform_35777_83	chr1	-	3056	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	3	3856	1	55	multi-exon	FALSE	canonical	3	55	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTTTTAT	NA	False	NA	-5	True	AATATA	-14	NA	64776907	64773572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64776013_64776291
Isoform_35782_47	chr1	-	2947	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	2	-54	2	54	multi-exon	FALSE	canonical	3	23	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTTTTTTTTTTTTTA	NA	False	NA	-6	True	AATATA	-13	NA	64776906	64773573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64776013_64776398
Isoform_35784_3	chr1	-	3528	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	2	-635	2	635	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTAGTTAGGACTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	64776906	64772992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64776013_64776398
Isoform_35785_9	chr1	-	3809	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	85	4668	-12	20	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATAAATAGAATTAATGA	NA	False	NA	NA	False	NA	NA	NA	64995898	64832947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
Isoform_35788_7	chr1	-	700	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	-58	-29	-58	29	multi-exon	FALSE	canonical	3	39	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATTTGCTTCTGTTTTT	7562	False	NA	-5	True	AATAAA	-23	NA	65102669	65101001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65101342_65102217_65102461_65102552
Isoform_35789_10	chr1	-	632	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	10	-29	10	29	multi-exon	FALSE	canonical	3	39	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATTTGCTTCTGTTTTT	7630	False	NA	-5	True	AATAAA	-23	NA	65102601	65101001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65101342_65102217_65102461_65102552
Isoform_35791_660	chr1	-	2192	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	104	6	104	-4	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65218236	65197780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
Isoform_35792_252	chr1	-	2229	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	69	4	69	-2	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTATTATGTGTT	NA	False	NA	-10	True	ATTAAA	-24	NA	65218271	65197778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
Isoform_35796_12	chr1	-	2341	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	367.996712277316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225629	65197780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225463
Isoform_35798_30	chr1	-	2275	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	4	4	4	-4	multi-exon	FALSE	canonical	3	72	junction_8	288.761904516506	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225634	65197780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
Isoform_358_327	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_+_1347_1678_1886_2389
Isoform_35800_11	chr1	-	1626	2	FSM	ENSMUSG00000026004.16	ENSMUST00000189846.2	1600	2	-49	23	-33	-23	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAAACCAAACAAAAAAC	6591	False	NA	NA	False	AATAAA	-21	NA	66856754	66839923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_66841328_66856532
Isoform_35801_18	chr1	-	1927	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-29	18	-29	-18	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGTAGACCGTGTG	NA	False	NA	-37	True	AATAAA	-11	NA	66902465	66870015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
Isoform_35802_4	chr1	-	1597	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-121	440	-121	-440	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGGGAGAGAGAAATT	NA	False	NA	-15	True	AATAAA	-18	NA	66902557	66870437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
Isoform_35803_25	chr1	-	1499	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-29	446	-29	-446	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTAACACAGGGAGAGA	NA	False	NA	-21	True	AATAAA	-12	NA	66902465	66870443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
Isoform_35806_93	chr1	-	1584	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	18	2859	11	-1	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078013	67042534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
Isoform_35808_3	chr1	-	1430	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	-49	4	-11	-4	multi-exon	FALSE	canonical	0	0	junction_9	165.875529714376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGGTCGAGTTTTTAT	NA	False	NA	-9	True	AATGAA	-12	NA	67078042	67042537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
Isoform_35809_18	chr1	-	1406	10	FSM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	5	2859	5	-1	multi-exon	FALSE	canonical	3	56	junction_9	152.892845556037	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078019	67042534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077934
Isoform_35810_44	chr1	-	1385	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTCGAGTTTTTATTTC	NA	False	NA	-6	True	AATGAA	-15	NA	67078024	67042534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
Isoform_35811_17	chr1	-	2650	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	179	2830	179	-2830	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTGTTGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	71142126	71069486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
Isoform_35828_15	chr1	-	2044	9	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	53884	2	1080	1	3prime_fragment	FALSE	canonical	3	2354	junction_8	211.965762270703	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	9647	False	NA	-8	True	AATAAA	-16	NA	71638447	71624680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373
Isoform_35834_12	chr1	-	2491	12	ISM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	51899	0	-908	0	3prime_fragment	FALSE	canonical	3	2104	junction_10	258.106519109091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	8866	False	NA	-10	True	AATAAA	-14	NA	71640435	71624682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359
Isoform_35837_12	chr1	-	2659	13	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	50710	1	-86	-1	3prime_fragment	FALSE	canonical	3	2104	junction_10	253.313157091288	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGACGTCATTTCTTT	9931	False	NA	-7	True	AATAAA	-17	NA	71641621	71624679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468
Isoform_35840_12	chr1	-	2876	14	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	49332	0	-996	0	3prime_fragment	FALSE	canonical	3	2104	junction_10	250.191453318473	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	9927	False	NA	-6	True	AATAAA	-18	NA	71642999	71624678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818
Isoform_35845_9	chr1	-	3520	18	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	45150	-1	1545	1	3prime_fragment	FALSE	canonical	3	2093	junction_15	263.199070790632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	6038	False	NA	-5	True	AATAAA	-19	NA	71647181	71624677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062
Isoform_35856_9	chr1	-	8314	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	-2	0	1	multi-exon	TRUE	canonical	3	1514	junction_37	371.719226311845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692331	71624680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_35857_3	chr1	-	4633	26	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	29062	3	234	0	3prime_fragment	FALSE	canonical	3	355	junction_21	486.738122608041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71663269	71624681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236
Isoform_35858_3	chr1	-	8039	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	0	4	0	0	multi-exon	FALSE	canonical	3	355	junction_21	441.858289425336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692331	71624682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_35860_6	chr1	-	6201	32	ISM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	18596	0	-23	5prime_fragment	FALSE	canonical	3	1514	junction_23	176.557054065451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71692331	71643278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_35861_3	chr1	-	5920	31	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	8	18596	-3	-23	5prime_fragment	FALSE	canonical	3	355	junction_7	310.150767996613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71692323	71643278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_35862_4	chr1	-	4494	19	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	8	39121	-3	4812	5prime_fragment	FALSE	canonical	3	1514	junction_10	103.214582303084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAATGTGACTATAATTT	NA	False	NA	NA	False	AAAAAG	-12	NA	71692323	71663803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
Isoform_35864_678	chr1	-	2442	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	48	-206	48	206	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGAGTGTGTGTTATA	4270	False	NA	-7	True	ATTAAA	-20	NA	72251418	72198394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_35866_156	chr1	-	2484	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	8	-208	8	208	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGTGTGTGTTATATT	4230	False	NA	-5	True	ATTAAA	-22	NA	72251458	72198392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_35869_28	chr1	-	2562	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	-70	-208	-70	208	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGTGTGTGTTATATT	4152	False	NA	-5	True	ATTAAA	-22	NA	72251536	72198392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
Isoform_3587_76	chr10	+	3507	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	1	119671	1	-119671	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGTATTTGGTGGCA	NA	False	NA	16	True	TTTAAA	-5	NA	83196085	83204698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
Isoform_35870_13	chr1	-	2398	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	48	206	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	261.207197450606	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGAGTGTGTGTTATA	4270	False	NA	-7	True	ATTAAA	-20	NA	72251418	72198394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175_72251347_72251390
Isoform_35879_63	chr1	-	1172	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	12	2	11	-2	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGTTATCTTTTAAGGA	NA	False	NA	-8	True	AATAAA	-17	NA	72323461	72298332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_35880_3	chr1	-	939	6	NIC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	98.9432160382914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCGGTTATCTTTTAAG	NA	False	NA	-10	True	AATAAA	-15	NA	72323478	72298334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72316445_72316580_72323251
Isoform_35881_3	chr1	-	1168	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	56	7823	1	1	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATGAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	72323417	72306153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_35882_3	chr1	-	1230	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-5	7822	-5	2	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	72323478	72306152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
Isoform_35883_450	chr1	-	1747	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	64	6	6	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323833	74319004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
Isoform_35884_16	chr1	-	1816	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	0	1	0	-1	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTGCATTTTGT	NA	False	NA	0	True	AATAAA	-18	NA	74323897	74318999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
Isoform_35886_30	chr1	-	1752	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	6	-2	6	2	multi-exon	FALSE	canonical	3	93	junction_10	361.877106211487	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323833	74319002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
Isoform_35888_6	chr1	-	2250	10	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-23	1	intron_retention	FALSE	canonical	3	1233	junction_7	53.416601664027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTCTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-14	NA	74323862	74319003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
Isoform_35890_6	chr1	-	2408	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	38.0389100486062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCCTTGAGTTGCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	74343251	74327410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74342933
Isoform_35891_180	chr1	-	2147	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	228	3	38	1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74343336	74327408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_35892_11	chr1	-	2363	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	10	5	10	-1	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCCTTGAGTTGCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	74343554	74327410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
Isoform_35894_3	chr1	-	2196	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	37.2398968494191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74344775	74327408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74344671
Isoform_35896_5	chr1	-	4975	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.0313816742797	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGAGTCTCCTTTTGTCT	NA	False	NA	-1	True	TTTAAA	-32	NA	74544978	74476888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_74478639_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_35898_3	chr1	-	7179	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	3	147	junction_23	24.5588861491903	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTAGTTTGATTTATTT	NA	False	NA	-2	True	ATTAAA	-15	NA	74544965	74474670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
Isoform_359_1430	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV4_+_1886_2251
Isoform_35900_10	chr1	-	1448	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	4	-1	-1	1	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640532	74632910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
Isoform_35901_57	chr1	-	1462	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	13	4	-7	1	multi-exon	FALSE	canonical	3	94	junction_3	8.63384096891663	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640543	74632910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
Isoform_35902_6	chr1	-	1346	8	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-50	-212	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	8.89622712968015	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGGTTACCTGTGAT	NA	False	NA	-5	True	AATAAA	-20	NA	75101894	75006509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097397_75101779
Isoform_35903_3	chr1	-	1952	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	108	2	108	1	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	7014	False	NA	-15	True	AATAAA	-15	NA	75118227	75112413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
Isoform_35904_18	chr1	-	2492	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-39	1216	20	1	multi-exon	FALSE	canonical	3	100	junction_8	23.1405353222435	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9328	False	NA	-15	True	AATAAA	-15	NA	75119321	75112413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
Isoform_35905_10	chr1	-	2404	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	26	-1	26	1	multi-exon	TRUE	canonical	3	17	junction_9	47.8820567438857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	9334	False	NA	-15	True	AATAAA	-15	NA	75119315	75112413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
Isoform_35906_247	chr1	-	2861	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	104	1	-2	-1	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCTGTGGTTTGGTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	75156932	75148361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_35907_48	chr1	-	2966	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75157036	75148360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_35911_12	chr1	-	2963	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	98	-95	-8	95	multi-exon	TRUE	canonical	3	123	junction_18	16.1765910736914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGCCAGTCTTTACTC	NA	False	NA	93	True	AAAAAG	-22	NA	75156938	75148265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
Isoform_35913_11	chr1	-	3907	16	FSM	ENSMUSG00000033124.17	ENSMUST00000189702.7	4110	16	198	5	-3	0	multi-exon	FALSE	canonical	3	11	junction_15	11.6714276000077	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168372	75157508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
Isoform_35915_18	chr1	-	3851	16	FSM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	-86	-1	-47	0	multi-exon	FALSE	canonical	3	19	junction_15	10.0013332444563	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168653	75157508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
Isoform_35916_3	chr1	-	3893	16	NIC	ENSMUSG00000033124.17	novel	4041	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	12.1043610139303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168355	75157508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168130
Isoform_35917_23	chr1	-	3855	16	FSM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	186	0	-48	0	multi-exon	FALSE	canonical	3	15	junction_15	10.8226100774669	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168654	75157508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
Isoform_35919_3	chr1	-	2131	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	1296	-1	12	1	3prime_fragment	FALSE	canonical	2	6	junction_6	4.27083130081252	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTCCACACACCTTC	6530	False	NA	NA	False	ATTAAA	-14	NA	75186126	75175989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
Isoform_35923_223	chr1	-	2052	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	747	-10	-3	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTGTGCTTTCTTTT	NA	False	NA	-5	True	ATTAAA	-17	NA	75195897	75191618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
Isoform_35924_738	chr1	-	1477	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	1322	-10	62	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75195897	75192193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
Isoform_35930_13	chr1	-	2285	3	FSM	ENSMUSG00000026202.14	ENSMUST00000187103.2	815	3	-9	-1461	-9	-2	multi-exon	FALSE	canonical	3	248	junction_1	30.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGCTTTCTTTTG	NA	False	NA	-4	True	ATTAAA	-18	NA	75195896	75191617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75193620_75193855_75194079_75195836
Isoform_35933_57	chr1	-	1678	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	184	0	-20	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293609	75285208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
Isoform_35935_8	chr1	-	2020	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	-158	0	6	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293951	75285208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
Isoform_35939_107	chr1	-	1602	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-31	0	17	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293620	75285208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
Isoform_35940_43	chr1	-	1630	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-59	0	-11	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293648	75285208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
Isoform_35944_146	chr1	-	1839	15	FSM	ENSMUSG00000026209.16	ENSMUST00000185797.7	2510	15	2	669	2	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294301	75285208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
Isoform_3595_5	chr10	+	5418	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	14	426	14	-426	multi-exon	TRUE	canonical	3	259	junction_12	27.5850956133924	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	83379818	83431911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
Isoform_35953_10	chr1	-	2669	4	FSM	ENSMUSG00000026211.19_ENSMUSG00000032997.17	ENSMUST00000138683.2	2455	4	-214	0	-26	0	multi-exon	FALSE	canonical	1	2	junction_3	53.0722777603022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455977	75451219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75452871_75453203_75453384_75453888_75454185_75455435
Isoform_35954_157	chr1	-	2947	4	FSM	ENSMUSG00000026211.19_ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	-61	6	-25	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75455976	75451218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_35955_211	chr1	-	2733	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	155	4	-2	2	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAGTGGAAACTGGTA	NA	False	NA	NA	False	AATAAA	-16	NA	75455760	75451216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_35957_18	chr1	-	3092	4	FSM	ENSMUSG00000026211.19_ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	-206	6	-170	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75456121	75451218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_35958_28	chr1	-	3044	4	FSM	ENSMUSG00000026211.19_ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	-153	1	-117	-1	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTGGAAACTGGTAATT	NA	False	NA	NA	False	AATAAA	-19	NA	75456068	75451213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
Isoform_35959_17	chr1	-	3401	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-28	6	-28	-5	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCTCATGGTAAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	75483033	75472985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_35960_9	chr1	-	3504	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-116	-9	-25	9	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTTCAATTAGGGTCC	NA	False	NA	NA	False	AATAAA	-35	NA	75483121	75472970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_35961_17	chr1	-	3876	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-837	5805	-26	-2	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCATGGTAAATAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	75483122	75472982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_35963_17	chr1	-	3782	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-748	5810	-28	-7	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAACCTCATGGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	75483033	75472987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
Isoform_35969_13	chr1	-	2034	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	3	-1	3	1	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCTCTGCTACTATC	NA	False	NA	NA	False	AATAAA	-19	NA	78465493	78394610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_3597_12	chr10	+	691	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	33	470	-28	129	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTGCCTCTTGTCTTC	NA	False	NA	7	True	CATAAA	-17	NA	83558761	83598156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
Isoform_35971_11	chr1	-	1798	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	3	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465496	78401721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
Isoform_35973_611	chr1	-	1893	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	41	17	3	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465493	78401721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_35974_11	chr1	-	2143	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	41	-233	3	233	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTTTCAGAATCAGTA	NA	False	NA	NA	False	AATAAA	-12	NA	78465493	78401471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
Isoform_3598_10	chr10	+	1122	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	72	0	11	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558800	83598626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
Isoform_35980_18	chr1	-	4484	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	66	1	18	-1	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTAATTTTGTTTGC	NA	False	NA	-1	True	AATAAA	-22	NA	79739420	79679979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
Isoform_35983_47	chr1	-	2019	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	60	131	-1	-131	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAACGTCTCGCTGGAC	NA	False	NA	-12	True	AATAAA	-7	NA	79836353	79772044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
Isoform_35986_3	chr1	-	3951	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	63	695	63	-695	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTCCCCATGCGTCT	NA	False	NA	-15	True	ATTAAA	-12	NA	80318134	80243334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_35987_8	chr1	-	2751	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	63	1895	63	5	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCTTCAGTGTTGAT	NA	False	NA	-22	True	AATAAA	-19	NA	80318134	80244534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
Isoform_35988_3	chr1	-	2680	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	-22	6	-22	-6	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGGCAATTTTATTTAT	418	False	NA	NA	False	AATAAA	-13	NA	84262388	84014022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_35989_6	chr1	-	2615	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	49	0	15	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTATTTATTTTTTT	489	False	NA	NA	False	AATAAA	-19	NA	84262317	84014016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_35990_6	chr1	-	2521	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	51	92	17	-92	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCAGGGCGTTTCACA	491	False	NA	NA	False	AATAAA	-17	NA	84262315	84014108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84016229_84136952_84137100_84262061
Isoform_35991_4	chr1	-	2924	13	NIC	ENSMUSG00000036766.13	novel	3632	13	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	4.19242040936842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTTGTCTCATTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	84618209	84347562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84618145
Isoform_35992_4	chr1	-	2988	13	NIC	ENSMUSG00000036766.13	novel	3632	13	NA	NA	-68	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	4.19242040936842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCACTTGTCTCATTCT	NA	False	NA	-3	True	AATAAA	-15	NA	84618274	84347563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84618145
Isoform_35993_3	chr1	-	3604	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	25	3	25	-3	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTTGTCTCATTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	84673917	84347562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
Isoform_35994_4	chr1	-	3245	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	386	1	184	-1	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTCTCATTCTTTA	NA	False	NA	0	True	AATAAA	-18	NA	84673556	84347560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
Isoform_35995_3	chr1	-	2303	14	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	5257	41	5257	-41	3prime_fragment	FALSE	canonical	3	994	junction_9	127.224816156888	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	NA	False	NA	-24	True	AATAAA	-18	NA	84721741	84702025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540
Isoform_35996_3	chr1	-	3497	22	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9497	-2320	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	239.135574788135	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTGTGGCTGGGGTTC	NA	False	NA	NA	False	NA	NA	NA	84827734	84729259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746454_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
Isoform_35998_4	chr1	-	3631	22	ISM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-157	30357	-150	-2327	5prime_fragment	FALSE	canonical	3	439	junction_21	108.743034807052	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGTAAAGTGTGGCT	7737	False	NA	NA	False	NA	NA	NA	84817182	84729266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
Isoform_35999_5	chr1	-	2392	5	NIC	ENSMUSG00000026220.7	novel	3207	5	NA	NA	-80	-1042	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.96074487943871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	84912935	84884660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912433
Isoform_36_49	ERCC-00035	+	1112	1	FSM	ERCC-00035A	DQ459413	1114	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00035_+_0_1100
Isoform_3600_4	chr10	+	1166	6	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	37.5904243125826	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGATTTCTTAATTATT	NA	False	NA	5	True	ATTAAA	-18	NA	83558750	83598625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_83558899_83573772_83573798_83593313_83593345_83593997_83594078_83595456_83595495_83597781
Isoform_36000_7	chr1	-	2237	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-72	1042	-72	-1042	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	84912927	84884660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
Isoform_36001_3	chr1	-	3013	4	ISM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-72	5032	-72	-5032	5prime_fragment	FALSE	canonical	2	5	junction_2	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84912927	84888650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_84890895_84900574_84900719_84907007_84907286_84912580
Isoform_3601_8	chr10	+	2447	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	272	6	1	-6	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATGGTAATCTTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	84412761	84450217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
Isoform_36035_1418	chr1	-	2389	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	36	5777	0	0	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287086	86278217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
Isoform_36036_52	chr1	-	2453	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-28	5777	-28	0	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287150	86278217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
Isoform_3605_21	chr10	+	4022	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	2	951	1	-951	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGTTTATGTTATT	NA	False	NA	9	True	NA	NA	NA	84458157	84562091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
Isoform_3606_39	chr10	+	4883	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	89	3	88	-3	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCAGTCTGAGAGGTGA	NA	False	NA	19	True	NA	NA	NA	84458244	84563039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
Isoform_36081_94	chr1	-	1123	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	15	21	-15	7	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGATGCTTCCATCTCCT	NA	False	NA	-4	True	ATTAAA	-22	NA	86510254	86470736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
Isoform_36083_5	chr1	-	2880	18	FSM	ENSMUSG00000026247.14	ENSMUST00000160810.2	2898	18	21	-3	21	-1	multi-exon	FALSE	canonical	2	4	junction_8	3.05089470115057	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCCTTGGCCTCCAGAC	6061	False	NA	NA	False	AATAAA	-15	NA	87083866	87075380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083741
Isoform_36084_10	chr1	-	2691	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	52	3	52	-3	multi-exon	FALSE	canonical	1	2	junction_2	3.91578004149024	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAGGTAGAGACCTA	NA	False	NA	NA	False	NA	NA	NA	87438032	87404558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
Isoform_36085_9	chr1	-	3558	30	ISM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-21	3569	-4	-313	5prime_fragment	FALSE	canonical	3	37	junction_28	6.72935253151893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGAAGAAAAAC	NA	False	NA	NA	False	AATAGA	-16	NA	87936277	87877733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
Isoform_36086_10	chr1	-	3521	29	ISM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	0	3716	0	-460	5prime_fragment	FALSE	canonical	3	37	junction_27	6.81562954703738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGGCTTTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	87936256	87877880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
Isoform_36087_6	chr1	-	4139	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	97	642	21	-642	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8688	False	NA	-19	True	AATAAA	-19	NA	88205258	88190834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
Isoform_36088_12	chr1	-	669	3	ISM	ENSMUSG00000044783.17	ENSMUST00000147393.2	2030	5	-97	9748	-24	-14	5prime_fragment	FALSE	canonical	3	259	junction_2	28.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAACAATGC	8621	False	NA	NA	False	NA	NA	NA	88205325	88202447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_88202820_88204940_88205008_88205095
Isoform_3609_4	chr10	+	4088	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	-7	894	-7	-894	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTTCCTCTGAGGTC	NA	False	NA	66	True	TTTAAA	-28	NA	84458148	84562148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
Isoform_36090_13	chr1	-	2729	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	40	11	18	-11	multi-exon	FALSE	canonical	3	259	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAATGCCTC	8685	False	NA	NA	False	NA	NA	NA	88205261	88202444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_88205008_88205095
Isoform_36091_10	chr1	-	2817	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	-48	11	6	-11	multi-exon	FALSE	canonical	3	259	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAATGCCTC	8597	False	NA	NA	False	NA	NA	NA	88205349	88202444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_88205008_88205095
Isoform_36092_170	chr1	-	2196	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	-66	5	-66	-5	multi-exon	FALSE	canonical	3	46	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATAAGCTTAATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	89858967	89855682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_89856866_89857954
Isoform_36096_40	chr1	-	2065	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	-3	-2	0	multi-exon	FALSE	canonical	3	59	junction_8	12	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAATTTGGTCACTGG	NA	False	NA	-1	True	AATAAA	-20	NA	90017868	89969853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
Isoform_36097_5	chr1	-	1344	10	ISM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	5525	-2	-5034	5prime_fragment	FALSE	canonical	3	59	junction_6	13.200261875442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGCTATGAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	90017868	89975381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
Isoform_36098_3	chr1	-	1811	6	FSM	ENSMUSG00000026304.14	ENSMUST00000027529.12	1831	6	19	1	2	1	multi-exon	FALSE	canonical	1	2	junction_1	1.2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCATGAGGTTATATT	NA	False	NA	NA	False	ATTAAA	-17	NA	90897364	90885855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90896951
Isoform_36099_6	chr1	-	1614	6	FSM	ENSMUSG00000026304.14	ENSMUST00000027529.12	1831	6	216	1	103	1	multi-exon	FALSE	canonical	1	2	junction_1	1.2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCATGAGGTTATATT	NA	False	NA	NA	False	ATTAAA	-17	NA	90897167	90885855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90896951
Isoform_3610_3	chr10	+	3341	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	-277	5	-277	-5	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGCCATCTGTGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	84753202	84852306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
Isoform_36100_31	chr1	-	1365	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	-6	True	AATAAA	-20	NA	91326518	91303550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
Isoform_36101_238	chr1	-	1361	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	8	-1	3	1	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGACTGGTCCT	NA	False	NA	-7	True	AATAAA	-19	NA	91326497	91303551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
Isoform_36103_4	chr1	-	1299	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	4	6	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	148.435305773256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACTGGTCCTGAGTT	NA	False	NA	-2	True	AATAAA	-24	NA	91326496	91303546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91326372
Isoform_36104_6	chr1	-	1394	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	140.659720690727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	-6	True	AATAAA	-20	NA	91326539	91303550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91326372
Isoform_36105_139	chr1	-	1313	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	2	20	2	-20	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCCTGGTGTACTGTC	NA	False	NA	-21	True	AATAAA	-15	NA	91340942	91339224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
Isoform_36106_24	chr1	-	1556	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	2	15	2	-15	multi-exon	FALSE	canonical	3	120	junction_1	9	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	-16	True	AATAAA	-20	NA	91340942	91339219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_91340525_91340614_91340702_91340778
Isoform_3611_5	chr10	+	3083	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	-14	0	-14	0	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753465	84852311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
Isoform_36110_96	chr1	-	1461	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	83	476	-10	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
Isoform_36113_3	chr1	-	676	3	FSM	ENSMUSG00000073616.11	ENSMUST00000148508.2	649	3	-41	14	21	-14	multi-exon	FALSE	canonical	3	39	junction_2	285.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTGATTTTAATTCCTG	NA	False	NA	-33	True	AATAAA	-16	NA	92569686	92564880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_92565126_92567408_92567482_92569328
Isoform_36114_4	chr1	-	471	4	NNC	ENSMUSG00000073616.11	novel	649	3	NA	NA	20	-12	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	277.022662530623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569687	92564878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_92565126_92567408_92567482_92569328_92569394_92569601
Isoform_36115_152	chr1	-	389	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	37	12	-25	-12	multi-exon	FALSE	canonical	3	610	junction_1	1	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569670	92564878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_92565126_92567408_92567482_92569601
Isoform_36116_3	chr1	-	325	2	NIC	ENSMUSG00000073616.11	novel	438	3	NA	NA	29	-11	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATTTTAATTCCTGTGC	NA	False	NA	-30	True	AATAAA	-19	NA	92569678	92564877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_92565126_92569601
Isoform_36117_6	chr1	-	4204	14	NIC	ENSMUSG00000034212.15	novel	1809	3	NA	NA	13851	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.0537589601968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92816777	92787547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_92789125_92798530_92798692_92799394_92799471_92804256_92804423_92804732_92804847_92806052_92806185_92807036_92807145_92808701_92808843_92809472_92809614_92811463_92811636_92812556_92812988_92813857_92814017_92814344_92814562_92816168
Isoform_36119_72	chr1	-	1296	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	46	24	-5	-24	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGGGGGTGCAACCC	NA	False	NA	-23	True	AATAAA	-15	NA	93233591	93228950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
Isoform_3612_13	chr10	+	3283	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-374	0	-334	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753145	84852311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_36120_3	chr1	-	2208	3	FSM	ENSMUSG00000026273.14	ENSMUST00000112942.2	1525	3	5	-688	4	-24	multi-exon	FALSE	canonical	3	72	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGGGGGTGCAACCC	NA	False	NA	-23	True	AATAAA	-15	NA	93233581	93228950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93230625_93232329_93232829_93233546
Isoform_36121_12	chr1	-	4681	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	42	1056	42	4	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTGTTTAAGTTCTC	NA	False	NA	-5	True	ATTAAA	-31	NA	93270469	93237555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
Isoform_36126_15	chr1	-	4387	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	37	3	0	-3	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93373371	93335486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
Isoform_36128_4	chr1	-	4377	28	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	111	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	108.478339167721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93405988	93335486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93405928
Isoform_36129_58	chr1	-	4451	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-45	1825	-31	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93406568	93335486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_3613_27	chr10	+	2939	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-30	0	10	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753489	84852311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
Isoform_36130_110	chr1	-	4420	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-14	1825	0	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93406537	93335486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_36131_7	chr1	-	6249	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-14	-4	0	4	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATGGGACTCATTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	93406537	93333657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_36132_4	chr1	-	4542	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-136	1825	-122	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTGCCCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	93406659	93335486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_36133_7	chr1	-	6290	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-62	3	-48	-3	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	-13	True	AATAAA	-11	NA	93406585	93333664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
Isoform_3614_3	chr10	+	3529	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	85	2	-31	-2	multi-exon	FALSE	canonical	3	175	junction_1	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGGAATGTTTCATAA	NA	False	NA	15	True	AATAAA	-15	NA	84938575	84953447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_84938862_84946662_84946730_84950271
Isoform_36141_287	chr1	-	2038	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	55	2156	-38	-5	multi-exon	TRUE	canonical	3	133	junction_7	20.1461601451751	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTGATGTACAGAGC	NA	False	NA	-41	True	AATAAA	-14	NA	93563389	93549628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
Isoform_36142_43	chr1	-	2125	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	-34	2158	-34	-7	multi-exon	FALSE	canonical	3	133	junction_7	20.1461601451751	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCTGATGTACAGA	NA	False	NA	-43	True	AATAAA	-12	NA	93563478	93549630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
Isoform_36143_483	chr1	-	1977	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	125	3456	-5	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTGTAGACTGTACA	NA	False	NA	-2	True	AATAAA	-37	NA	93682377	93633112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
Isoform_36144_94	chr1	-	2188	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	-85	3455	-1	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	-1	True	AATAAA	-38	NA	93682587	93633111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
Isoform_36148_618	chr1	-	962	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	28	13	0	-13	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATATCTCACGAGCTT	2338	False	NA	-33	True	AATAAA	-11	NA	93729628	93720310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
Isoform_3615_3	chr10	+	3839	15	ISM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	174820	5	-36767	-2	3prime_fragment	TRUE	canonical	3	31	junction_1	6.30192714288937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTTTGCATCCTCTTT	NA	False	NA	8	True	ATTAAA	-13	NA	85397497	85496151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
Isoform_36150_47	chr1	-	1781	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	37	-815	9	815	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGTCTCTCGTGAGAT	2347	False	NA	-16	True	NA	NA	NA	93729619	93719482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
Isoform_36153_767	chr1	-	623	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	432	0	-432	multi-exon	FALSE	canonical	3	2511	junction_1	0	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTGGTTTTGT	2338	False	NA	-8	True	ATTAAA	-14	NA	93729628	93728218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93728633_93729419
Isoform_36155_154	chr1	-	653	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	-30	432	-2	-432	multi-exon	FALSE	canonical	3	2511	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTGGTTTTGT	2308	False	NA	-8	True	ATTAAA	-14	NA	93729658	93728218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_93728633_93729419
Isoform_36157_11	chr1	-	2379	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	19	2510	19	-2510	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96799877	96746504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
Isoform_36159_21	chr1	-	2727	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	66	37585	66	0	multi-exon	FALSE	canonical	3	49	junction_2	5.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	-1	True	AATAAA	-18	NA	97589733	97571627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_97574087_97582324_97582415_97589555
Isoform_36162_8	chr1	-	5383	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	387	112	387	-112	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9221	False	NA	-34	True	ATTAAA	-18	NA	97697749	97633884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_36163_3	chr1	-	5411	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	354	-114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.5000737150627	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGACTTGAATTTAAAG	9188	False	NA	-36	True	ATTAAA	-16	NA	97697782	97633886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
Isoform_36164_4	chr1	-	3787	25	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	3	2	combination_of_known_junctions	TRUE	canonical	1	5	junction_2	5.09884927105017	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGAGTGTATTTTTGTG	NA	False	NA	-4	True	AATAAA	-20	NA	98023354	97748816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
Isoform_36166_10	chr1	-	2612	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	28	2878	0	-2878	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8289	False	NA	NA	False	NA	NA	NA	106687429	106651066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
Isoform_36171_39	chr1	-	2874	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	32	1727	-29	-1727	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	56	False	NA	-1	True	AGTAAA	-14	NA	106724426	106698886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
Isoform_36172_50	chr1	-	2803	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	103	1727	42	-1727	multi-exon	TRUE	canonical	3	455	junction_4	35.0793386482699	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	127	False	NA	-1	True	AGTAAA	-14	NA	106724355	106698886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
Isoform_3618_196	chr10	+	2545	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	34	-7	-19	7	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTTTGACTTCACTCT	NA	False	NA	15	True	AATAAA	-26	NA	85707728	85724967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
Isoform_36196_47	chr1	-	3132	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	1125	-2	1125	2	multi-exon	FALSE	canonical	3	45	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	119348853	119343192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119345828_119348356
Isoform_36202_41	chr1	-	2129	5	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	216	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	456.372312372256	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	-7	True	AATAAA	-18	NA	119432308	119398037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432247
Isoform_36210_2109	chr1	-	2117	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	169	3	169	-3	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	-7	True	AATAAA	-18	NA	119432355	119398037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_36211_1317	chr1	-	2222	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	63	4	63	-4	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	119432461	119398038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_36212_351	chr1	-	2285	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	1	3	1	-3	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCGCCCTTTTTCCTG	NA	False	NA	-7	True	AATAAA	-18	NA	119432523	119398037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
Isoform_36221_25	chr1	-	3363	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-14	3093	-14	1	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATAATGT	NA	False	NA	NA	False	TTTAAA	-38	NA	119576680	119475859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
Isoform_36222_12	chr1	-	3299	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	29	13	29	-13	multi-exon	FALSE	canonical	3	113	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	NA	False	NA	NA	False	AATAAA	-8	NA	119840909	119835632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119838885_119840862
Isoform_36223_59	chr1	-	1482	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	38	1821	38	-1821	multi-exon	FALSE	canonical	3	113	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTCTCTGAATTCCAGT	NA	False	NA	-11	True	AATAAA	-17	NA	119840900	119837440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119838885_119840862
Isoform_36224_17	chr1	-	865	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	152	294	-152	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGGAGAGTATCCTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	120001510	119995258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_119996055_120001441
Isoform_36226_296	chr1	-	528	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	30	11	-1	-1	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGGTTACTCTGTTG	NA	False	NA	-12	True	ATTAAA	-18	NA	120048778	120041020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
Isoform_36229_67	chr1	-	2779	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-10	-17	-10	17	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTGTTTATTATTCT	NA	False	NA	-4	True	NA	NA	NA	120193024	120154135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
Isoform_36232_18	chr1	-	2855	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2431	-236	149	6	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTAAAATTGTCCTTTG	NA	False	NA	-15	True	NA	NA	NA	120198004	120154146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
Isoform_36233_4	chr1	-	3035	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2253	-238	-29	8	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAAATTGTCCTTTGTT	NA	False	NA	-13	True	NA	NA	NA	120198182	120154144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
Isoform_36234_11	chr1	-	1234	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	266	1197	7	5	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAAAAAGAAAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	121255487	121233278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
Isoform_36235_12	chr1	-	1101	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	266	1330	7	12	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATATGTTTATGAGTACA	NA	False	NA	NA	False	AATAAA	-26	NA	121255487	121233411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
Isoform_36236_4	chr1	-	2396	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTAGTCCTTTTTA	NA	False	NA	-4	True	ATTAAA	-14	NA	121255487	121232084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
Isoform_36241_545	chr1	-	2204	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	48	6	48	-6	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495670	121481569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
Isoform_36242_183	chr1	-	2234	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	20	4	20	-4	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	-20	True	CATAAA	-19	NA	121495698	121481567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
Isoform_36249_244	chr1	-	2560	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	2	3	2	-3	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363282	125320645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
Isoform_3625_61	chr10	+	1875	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-31	3544	-31	6	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85857804	85884193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_36250_223	chr1	-	2665	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-103	3	57	-3	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363387	125320645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
Isoform_36254_45	chr1	-	2385	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-156	336	4	242	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCAGGCTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	125363440	125320978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
Isoform_3626_29	chr10	+	1925	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-84	3547	-84	3	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	NA	False	NA	13	True	AGTAAA	-16	NA	85857751	85884190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_36260_58	chr1	-	2524	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	25	5	5	-4	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363439	125320646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
Isoform_36263_50	chr1	-	2522	13	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	705.897183259243	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363440	125320646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363389
Isoform_36264_3	chr1	-	1733	8	FSM	ENSMUSG00000026347.14	ENSMUST00000185560.2	3488	8	1755	0	228	0	multi-exon	FALSE	canonical	2	4	junction_7	2.65729646253404	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGAATCTGCATATCTC	NA	False	NA	NA	False	AATAAA	-15	NA	127605530	127418634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_127419398_127423454_127423597_127427920_127428033_127447081_127447179_127479062_127479155_127480497_127480542_127596387_127596508_127605167
Isoform_36265_6	chr1	-	4031	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_20	44.9244922063678	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTAAATTATGG	NA	False	NA	-11	True	AATAAA	-16	NA	128030780	127881926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030743
Isoform_36267_41	chr1	-	4104	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	4	102	4	-102	multi-exon	FALSE	canonical	3	115	junction_3	27.0654761642946	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCTCCTGG	NA	False	NA	-6	True	TATAAA	-17	NA	128030195	127882022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_36268_30	chr1	-	4205	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	-1	6	0	-6	multi-exon	TRUE	canonical	3	115	junction_3	27.0654761642946	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTAAATTATGG	NA	False	NA	-11	True	AATAAA	-16	NA	128030200	127881926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_36271_5	chr1	-	2045	13	NIC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.1305933426774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATATGTGTGATTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	128030202	127914847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
Isoform_3628_3	chr10	+	2130	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-102	-1	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_4	100.668628874671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCAGACTTGACTTTTT	NA	False	NA	9	True	AGTAAA	-12	NA	85857733	85884186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85868823_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_3629_4	chr10	+	1729	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	-68	-6	-68	6	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85857984	85884193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
Isoform_36296_1604	chr1	-	2943	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-19	-14	-19	14	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTACTCTTGATTATT	NA	False	NA	-7	True	AATAAA	-31	NA	128287420	128259312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
Isoform_36297_4307	chr1	-	2897	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	14	-1	-3	1	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTGGATTCATTTCT	NA	False	NA	-20	True	AATAAA	-18	NA	128287387	128259325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
Isoform_3630_3	chr10	+	370	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	22	1230	22	95	multi-exon	FALSE	canonical	3	71	junction_1	95.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGGGGCTCAATGG	NA	False	NA	NA	False	AGTAAA	-19	NA	86521410	86524588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86521473_86521743_86521861_86524397
Isoform_3631_7	chr10	+	491	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-54	1228	32	97	multi-exon	FALSE	canonical	3	53	junction_1	104.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGGGGCTCAATGGCT	NA	False	NA	NA	False	AGTAAA	-21	NA	86521420	86524590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_36313_2107	chr1	-	2174	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	1	0	1	0	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345095	128291443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
Isoform_36314_35	chr1	-	2213	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	-38	0	-29	0	multi-exon	FALSE	canonical	3	1712	junction_8	135.919976456737	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345134	128291443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
Isoform_3632_3	chr10	+	659	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-55	1061	31	264	multi-exon	FALSE	canonical	3	53	junction_1	104.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	NA	False	NA	NA	NA	86521419	86524757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_36320_6	chr1	-	2729	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-37	-20	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAGAAATAAATAAATA	NA	False	NA	NA	False	TTTAAA	-25	NA	130390225	130366783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
Isoform_36321_12	chr1	-	2485	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	28	20	15	-20	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAGAAATAAATAAATA	NA	False	NA	NA	False	TTTAAA	-25	NA	130390453	130366783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_36322_4	chr1	-	2650	10	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-63	-20	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_3	25.3177339886686	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAGAAATAAATAAATA	NA	False	NA	NA	False	TTTAAA	-25	NA	130390251	130366783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_130367260_130367283_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
Isoform_36323_5	chr1	-	2432	10	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	0	17	at_least_one_novel_splicesite	TRUE	non_canonical	2	9	junction_3	22.1058061754523	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGAAATTTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	130390468	130366746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_130367260_130367283_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
Isoform_36326_31	chr1	-	2858	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	-8	4	-8	-4	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025571	130981440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
Isoform_36329_311	chr1	-	2158	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	20	986	20	-986	multi-exon	FALSE	canonical	3	221	junction_1	9	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	257	False	NA	-3	True	ATTAAA	-19	NA	131066057	131056177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_131057983_131063996_131064109_131065816
Isoform_3633_3	chr10	+	1684	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-18	-1	-8	1	multi-exon	FALSE	canonical	3	53	junction_1	104.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTATGTGTATGAGTG	NA	False	NA	2	True	AGTAAA	-11	NA	86521456	86525819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86521602_86521743_86521861_86524397
Isoform_36330_438	chr1	-	2089	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	89	986	-6	-986	multi-exon	FALSE	canonical	3	221	junction_1	9	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	326	False	NA	-3	True	ATTAAA	-19	NA	131065988	131056177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_131057983_131063996_131064109_131065816
Isoform_36331_8	chr1	-	2793	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	62	309	-33	-309	multi-exon	FALSE	canonical	3	221	junction_1	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGGAGGAAGTGCTGC	299	False	NA	-24	True	NA	NA	NA	131066015	131055500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_131057983_131063996_131064109_131065816
Isoform_36337_3	chr1	-	3403	6	FSM	ENSMUSG00000026430.17	ENSMUST00000027688.15	3485	6	73	9	73	-9	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACAAGTCACGATGGA	NA	False	NA	NA	False	AATAAA	-10	NA	131172922	131104155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_131106415_131108289_131108406_131108890_131109189_131109880_131109992_131139993_131140116_131172425
Isoform_36339_11	chr1	-	2653	18	ISM	ENSMUSG00000042349.14	ENSMUST00000161764.8	2867	21	1648	0	1410	0	3prime_fragment	FALSE	canonical	1	1	junction_15	6.08759587435071	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	NA	False	NA	NA	False	AATAAA	-19	NA	131203040	131182338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886
Isoform_3634_3	chr10	+	404	2	FSM	ENSMUSG00000097412.3	ENSMUST00000218536.2	204	2	-115	-85	-7	85	multi-exon	FALSE	canonical	3	262	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACACTTAATTTAGGG	NA	False	NA	NA	False	AGTAAA	-9	NA	86521637	86524578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86521861_86524397
Isoform_36340_3	chr1	-	2772	18	ISM	ENSMUSG00000042349.14	ENSMUST00000161764.8	2867	21	1528	1	1290	-1	3prime_fragment	FALSE	canonical	1	1	junction_15	6.08759587435071	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCAGCTATGGTACC	NA	False	NA	NA	False	AATAAA	-18	NA	131203160	131182339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886
Isoform_36341_5	chr1	-	721	2	ISM	ENSMUSG00000026425.16	ENSMUST00000189893.7	3171	5	-27	162994	-27	-88345	5prime_fragment	FALSE	canonical	3	122	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAGGAAAACATGAC	NA	False	NA	NA	False	NA	NA	NA	131455117	131452757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_131453332_131454970
Isoform_36342_231	chr1	-	2934	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	0	1421	0	928	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	597	False	NA	-6	True	AATATA	-19	NA	132067422	132041395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_36344_50	chr1	-	2970	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	-36	1421	-36	928	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	561	False	NA	-6	True	AATATA	-19	NA	132067458	132041395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_36349_9	chr1	-	2891	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	928	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGAGCAGTCTCA	597	False	NA	-6	True	AATATA	-19	NA	132067422	132041395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
Isoform_3635_19	chr10	+	5914	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	28	10	28	-10	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCCTGGTATGTGTGTT	NA	False	NA	2	True	AATAAA	-12	NA	86614896	86674243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
Isoform_36350_9	chr1	-	3142	21	NIC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	7	-9	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTATCATTAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	132669528	132527581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
Isoform_36351_9	chr1	-	1996	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	33	5076	-26	58	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGTTATGTAATGTT	NA	False	NA	0	True	AATACA	-20	NA	132953121	132919033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
Isoform_36352_8	chr1	-	1952	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	18	-56	0	56	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTGTTATGTAATG	NA	False	NA	-2	True	AATACA	-18	NA	132953076	132919035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
Isoform_36353_3	chr1	-	6988	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953105	132913957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
Isoform_36355_3	chr1	-	1893	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	11	895	2	57	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTGTTATGTAATGT	NA	False	NA	-1	True	AATACA	-19	NA	132953084	132919034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
Isoform_36359_25	chr1	-	3733	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	19.4802281798964	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCCCTTTCTCTGCTG	NA	False	NA	-7	True	AATAAA	-16	NA	133352157	133310039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_36361_19	chr1	-	3762	14	FSM	ENSMUSG00000070643.12	ENSMUST00000153799.8	3693	14	-69	0	-69	0	multi-exon	FALSE	canonical	3	38	junction_8	19.9582404271205	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352184	133310040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_36363_11	chr1	-	4280	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-58	0	intron_retention	FALSE	canonical	3	41	junction_7	18.2412459978905	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352173	133310040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_36364_10	chr1	-	4270	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-44	1	intron_retention	FALSE	canonical	3	38	junction_7	18.8252194911212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCCCTTTCTCTGCTG	NA	False	NA	-7	True	AATAAA	-16	NA	133352159	133310039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
Isoform_36366_29	chr1	-	650	4	FSM	ENSMUSG00000090553.9	ENSMUST00000172079.2	653	4	18	-15	18	-5	multi-exon	FALSE	canonical	3	3763	junction_3	471.411356107027	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTTACATTGTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	133537767	133531618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455
Isoform_36368_983	chr1	-	469	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	26	8	-16	-3	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTACATTGTTTCATT	NA	False	NA	-17	True	AATAAA	-22	NA	133538003	133531616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
Isoform_3637_310	chr10	+	1253	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	13	1	13	1	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982866	88014251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_36373_24	chr1	-	2798	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-56	1654	4	-1654	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
Isoform_36374_18	chr1	-	2776	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-3	-1654	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589109	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
Isoform_36375_28	chr1	-	2750	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	0	1645	0	-1645	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589118	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
Isoform_36376_6	chr1	-	2723	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1647	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
Isoform_36377_3	chr1	-	3204	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-1654	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	109.88493510003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588974
Isoform_36378_5	chr1	-	3150	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1645	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	103.726503363412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588974
Isoform_36379_4	chr1	-	3137	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	-1645	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	105.649904608334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589118	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588993
Isoform_3638_4	chr10	+	1164	9	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	178.136885568374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982861	88014251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88013995
Isoform_36380_6	chr1	-	4110	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1645	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
Isoform_36381_3	chr1	-	4089	17	NIC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	-56	-1578	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589112	133549255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
Isoform_36388_56	chr1	-	2580	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	3	160	3	-160	multi-exon	FALSE	canonical	3	77	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTAGAGAAGGTGGA	NA	False	NA	-10	True	AATAAA	-17	NA	134006855	134003067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_134005442_134006649
Isoform_3639_27	chr10	+	1293	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-15	-1	-15	1	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982923	88014251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_36391_33	chr1	-	3085	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	293	1591	293	6	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254711	134226112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_36392_16	chr1	-	3147	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	230	1592	230	5	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTTGGACTAATTGG	NA	False	NA	-1	True	AATAAA	-18	NA	134254774	134226113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_36393_10	chr1	-	4681	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	287	1	287	0	3prime_fragment	TRUE	canonical	2	30	junction_19	10.0641691162261	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	134254717	134224522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_36394_6	chr1	-	3401	21	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	285	6	intron_retention	FALSE	canonical	2	11	junction_1	12.4638477205075	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254719	134226112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_36395_4	chr1	-	3459	21	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	227	6	intron_retention	FALSE	canonical	2	11	junction_1	12.4638477205075	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254777	134226112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
Isoform_36396_12	chr1	-	3281	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	-8	-1584	4	-1	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCAACTTGTGAG	NA	False	NA	-10	True	AATAAA	-15	NA	134289687	134273835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_36398_3	chr1	-	4002	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	-2	8	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTGAGTTTTTATGT	NA	False	NA	-1	True	AATAAA	-24	NA	134289681	134273826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_36399_122	chr1	-	3111	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	38	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289679	134273834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
Isoform_3640_11	chr10	+	1350	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-72	-1	13	1	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTCCTATTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	87982866	88014251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
Isoform_36405_24	chr1	-	3120	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289691	134273834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
Isoform_36409_3	chr1	-	1602	10	ISM	ENSMUSG00000073557.13	ENSMUST00000132025.2	3213	20	0	41898	0	-41898	5prime_fragment	FALSE	canonical	0	0	junction_8	2.0427529234278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGGGGAGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	134883666	134803701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
Isoform_36410_4	chr1	-	887	6	ISM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	22367	0	237	0	3prime_fragment	FALSE	canonical	3	8	junction_5	3.5213633723318	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTGTGTCTGCTTCTGC	NA	False	NA	-1	True	AATAAA	-18	NA	135037965	135036235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822
Isoform_36411_3	chr1	-	403	3	NIC	ENSMUSG00000097993.8	novel	446	3	NA	NA	-290	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	6	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGTTGTGTCTGCTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	135037617	135036237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_135036434_135036656_135036793_135037546
Isoform_36412_3	chr1	-	2230	2	FSM	ENSMUSG00000026424.9	ENSMUST00000027682.9	2269	2	19	20	19	-20	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCTGTGCCCACAGAA	9956	False	NA	-2	True	AATAAA	-10	NA	135095400	135087991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135089434_135094612
Isoform_36417_1402	chr1	-	1923	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-19	-3	-19	-1	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGAGCTCTCTGTGTA	NA	False	NA	-7	True	AATAAA	-26	NA	135186195	135181313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
Isoform_3642_194	chr10	+	864	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	38	150	-15	1	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88036992	88081870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
Isoform_36421_1408	chr1	-	1985	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	111	-1	-19	1	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186195	135181311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
Isoform_36422_138	chr1	-	2012	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	84	-1	-46	1	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186222	135181311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
Isoform_3643_48	chr10	+	823	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	17	-2	-2	1	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88037030	88081870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
Isoform_36430_707	chr1	-	2231	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	57	0	57	0	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211765	135190449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
Isoform_36431_124	chr1	-	2284	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	3	1	3	-1	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTTGGAGTTATAGAAT	NA	False	NA	-15	True	AATAAA	-21	NA	135211819	135190450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
Isoform_36434_22	chr1	-	2140	10	FSM	ENSMUSG00000041926.16	ENSMUST00000074357.8	2171	10	31	0	31	0	multi-exon	FALSE	canonical	3	54	junction_7	75.0946727574148	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211791	135190449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135205126_135205276_135206504_135206646_135211299
Isoform_36435_9	chr1	-	2446	10	NIC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	30	-3	intron_retention	FALSE	canonical	3	249	junction_7	16.9115345252878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTTGGAGTTATAGA	NA	False	NA	-17	True	AATAAA	-19	NA	135211792	135190452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
Isoform_36438_418	chr1	-	905	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	41	6334	41	269	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCCTTTGAAAGTTAG	NA	False	NA	-18	True	AATAAA	-17	NA	135241475	135229284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
Isoform_3644_29	chr10	+	861	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	-21	-2	-15	1	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTTTGTTGACCAAAT	NA	False	NA	15	True	AATAAA	-18	NA	88036992	88081870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
Isoform_36441_34	chr1	-	1215	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	41	6024	41	579	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135241475	135228974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
Isoform_36447_5	chr1	-	1201	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	163	399	3	-396	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135302812	135299193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
Isoform_36448_4	chr1	-	1603	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	163	-3	3	3	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCCGTCCTTCCTTCCT	NA	False	NA	6	True	NA	NA	NA	135302812	135298791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
Isoform_3645_4	chr10	+	5372	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	8	10	8	-1	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTTTGAGTTTATTGT	NA	False	NA	12	True	CATAAA	-14	NA	88215095	88283181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_36451_12	chr1	-	4161	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	22	6	-11	-6	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTAGTCTGCATAC	NA	False	NA	-25	True	AGTAAA	-13	NA	135358207	135312216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
Isoform_36452_333	chr1	-	4044	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	36	2167	-5	-6	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTAGTCTGCATAC	NA	False	NA	-25	True	AGTAAA	-13	NA	135358201	135312216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_36454_16	chr1	-	4116	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	60	2071	-6	90	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGCATCCTACTGTG	NA	False	NA	71	True	AGTAAA	-21	NA	135358177	135312120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_36456_12	chr1	-	6214	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	30	3	-11	-3	multi-exon	TRUE	canonical	3	518	junction_15	35.6964730086209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTCCTGTCAGTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	135358207	135310052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_36457_57	chr1	-	4080	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	2167	0	-6	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTAGTCTGCATAC	NA	False	NA	-25	True	AGTAAA	-13	NA	135358237	135312216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
Isoform_3646_11	chr10	+	4804	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	9	577	9	-568	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTTTGTCAAATAGTCT	NA	False	NA	7	True	AGTAAA	-16	NA	88215096	88282614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_36467_16	chr1	-	2798	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	200	-10	55	10	multi-exon	TRUE	canonical	3	39	junction_9	8.93736780097342	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGTGTGCTGAGTT	NA	False	NA	-3	True	AATAAA	-30	NA	136161802	136141258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
Isoform_36469_9	chr1	-	2951	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-4	-1191	-4	4	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATACTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	136881372	136772009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_3647_5	chr10	+	5339	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	45	6	45	3	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTTTATTGTTAGT	NA	False	NA	16	True	CATAAA	-18	NA	88215132	88283185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
Isoform_36470_3	chr1	-	4626	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	29	-2899	29	7	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTTATGTTGTCCTTG	NA	False	NA	-7	True	AATAAA	-30	NA	136881339	136770301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_36475_3	chr1	-	3710	7	ISM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	23	42847	23	2047	5prime_fragment	FALSE	canonical	3	24	junction_6	14.2877181134319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	136881345	136816047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
Isoform_36479_10	chr1	-	4026	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-8	1240	-8	-3	multi-exon	TRUE	canonical	3	136	junction_1	7.19739321808962	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTAGTATCTATCAG	NA	False	NA	-15	True	AATAAA	-13	NA	138547495	138411852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
Isoform_3648_7	chr10	+	1169	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
Isoform_36483_11	chr1	-	485	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	26	54	21	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCTGTTACGAATATTT	NA	False	NA	-12	True	AATAAA	-14	NA	138784564	138779774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_138779912_138781308_138781411_138784318
Isoform_36484_3	chr1	-	2803	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	81	8702	81	-1341	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTGTGTTCAATG	NA	False	NA	-2	True	GATAAA	-14	NA	143578550	143483239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_36485_6	chr1	-	2531	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	80	8975	80	-1614	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGTAGTGATTTTT	NA	False	NA	NA	False	ATTAAA	-5	NA	143578551	143483512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
Isoform_36487_3	chr1	-	3966	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	38	4734	38	324	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAATTTAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143652768	143631261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
Isoform_36488_5	chr1	-	2603	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	12	6123	12	-1065	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGATTTTCTGTACCCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	143652794	143632650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
Isoform_36489_8	chr1	-	2922	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	346	5	9	3	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTGGAATTTTAAAA	979	False	NA	NA	False	AATAAA	-16	NA	150268485	150237060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_36491_4	chr1	-	2082	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	-40	1231	-40	-2	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	593	False	NA	NA	False	NA	NA	NA	150268871	150238286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_36493_4	chr1	-	1032	11	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	32.2080735220224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAGTATGACTAT	963	False	NA	NA	False	AATGAA	-7	NA	150268501	150250555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
Isoform_36495_10	chr1	-	1062	11	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	340	13498	3	1	5prime_fragment	FALSE	canonical	3	106	junction_6	14.7932417001819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTATGACTATAA	973	False	NA	NA	False	AATGAA	-9	NA	150268491	150250553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
Isoform_36496_25	chr1	-	2877	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	122	689	103	-24	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304084	151244138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_36497_6	chr1	-	3010	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	-11	689	-11	-24	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304217	151244138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_36498_12	chr1	-	2131	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	103	-26	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304084	151244140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_36499_3	chr1	-	2268	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	-14	-25	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304220	151244139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
Isoform_3650_3	chr10	+	1229	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	-60	0	35	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295465	88309098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
Isoform_36502_5	chr1	-	3055	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-6	-102	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTAAGCAGAAAGTTATT	NA	False	NA	-2	True	ATTAAA	-33	NA	151376568	151345258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
Isoform_36503_4	chr1	-	3153	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTAGATGTGTACTCC	NA	False	NA	-4	True	CATAAA	-21	NA	151376562	151345154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
Isoform_36504_3	chr1	-	3201	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-16	-110	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTTATCTAAGCAGA	NA	False	NA	-10	True	ATTAAA	-25	NA	151376722	151345266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
Isoform_36505_104	chr1	-	2908	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	145	107	1	-107	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATCTAAGCAGAAAG	NA	False	NA	-7	True	ATTAAA	-28	NA	151376561	151345263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_36506_24	chr1	-	3089	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-36	107	-36	-107	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATCTAAGCAGAAAG	NA	False	NA	-7	True	ATTAAA	-28	NA	151376742	151345263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_36508_27	chr1	-	3011	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	147	2	3	-2	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTTATTAGATGTGTA	NA	False	NA	-8	True	CATAAA	-17	NA	151376559	151345158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_36509_7	chr1	-	3211	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-46	-5	-46	4	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGATGTGTACTCCTTT	NA	False	NA	-1	True	CATAAA	-24	NA	151376752	151345151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
Isoform_3651_33	chr10	+	1045	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	95	-1	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_36514_4	chr1	-	3426	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-191	6324	-191	2055	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGTACTTTATTT	NA	False	NA	-1	True	CATAAA	-13	NA	151966067	151766598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
Isoform_36516_25	chr1	-	1654	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-158	8063	-158	316	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGTCTTCTCCCATT	NA	False	NA	-1	True	AATAAA	-19	NA	151966034	151768337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
Isoform_36519_238	chr1	-	1036	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	77	20	-13	-20	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATATCTTGAAA	NA	False	NA	-25	True	AATAAA	-9	NA	152262356	152246505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
Isoform_3652_4	chr10	+	1106	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	31	2	31	-2	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTGGTTTCAGTAT	NA	False	NA	1	True	AATAAA	-13	NA	88295461	88309095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_36520_52	chr1	-	1081	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	32	20	-30	-20	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATATCTTGAAA	NA	False	NA	-25	True	AATAAA	-9	NA	152262401	152246505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
Isoform_36522_4	chr1	-	5792	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-26	1	-2	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778399	152712746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_36525_16	chr1	-	5672	22	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778416	152712745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
Isoform_3653_8	chr10	+	927	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
Isoform_36530_16	chr1	-	4916	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153061793	152998501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
Isoform_36531_11	chr1	-	5084	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-169	1	-169	-1	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGTTTCTGATTTTAT	NA	False	NA	-2	True	AATAAA	-18	NA	153061962	152998502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
Isoform_36532_12	chr1	-	5018	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-101	-1	-101	1	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTCTGATTTTATTA	NA	False	NA	0	True	AATAAA	-20	NA	153061894	152998500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
Isoform_36537_23	chr1	-	7599	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	19	4	19	-4	multi-exon	TRUE	canonical	3	518	junction_2	111.881330429904	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATCTTGTGTGGCCTA	NA	False	NA	-5	True	AATAAA	-20	NA	153208513	153094671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_36538_3	chr1	-	5441	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-147	2328	-147	-2328	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCGGAACTTTCCCTTG	NA	False	NA	-6	True	AATAAA	-26	NA	153208679	153096995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_36539_56	chr1	-	4067	22	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	23	11800	23	-1907	5prime_fragment	FALSE	canonical	3	652	junction_5	74.3336231347879	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGCAGAGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	153208509	153106467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_36540_5	chr1	-	4235	22	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-145	11800	-145	-1907	5prime_fragment	FALSE	canonical	3	652	junction_5	74.3336231347879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGCAGAGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	153208677	153106467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_36541_12	chr1	-	2636	11	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	13	29700	13	-5	5prime_fragment	FALSE	canonical	3	696	junction_9	48.7156032498829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGCCTTCAAGAACT	NA	False	NA	NA	False	AATAAA	-7	NA	153208519	153124367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
Isoform_36543_4	chr1	-	1898	2	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	23	42511	23	-12816	5prime_fragment	FALSE	canonical	3	756	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153208509	153137178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153138441_153207873
Isoform_36544_8	chr1	-	499	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	1	1464	1	-44	multi-exon	FALSE	canonical	3	87	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGTGTTCAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	153283535	153282036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153282348_153283347
Isoform_36545_9	chr1	-	4602	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	9	5	0	-5	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTGTGTCATTGAT	NA	False	NA	-6	True	AATAAA	-13	NA	153363397	153331508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_36546_3	chr1	-	2369	19	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	-68	8583	-16	1	5prime_fragment	TRUE	canonical	3	12	junction_15	32.2507536518313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGTTCCCAAAACTTGT	NA	False	NA	NA	False	CATAAA	-30	NA	153363422	153340086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_36547_10	chr1	-	2346	19	FSM	ENSMUSG00000042699.12	ENSMUST00000188345.2	2346	19	1	-1	1	1	multi-exon	FALSE	canonical	3	83	junction_15	20.3910080642558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGTTCCCAAAACTTGT	NA	False	NA	NA	False	CATAAA	-30	NA	153363396	153340086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_36549_28	chr1	-	502	4	ISM	ENSMUSG00000042699.12	ENSMUST00000189509.2	2658	5	7	4302	0	1230	5prime_fragment	FALSE	canonical	3	106	junction_2	10.7806410858642	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGAAGGTAAGGGACTT	NA	False	NA	NA	False	NA	NA	NA	153363397	153356886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153356996_153358487_153358629_153359485_153359619_153363278
Isoform_3655_201	chr10	+	1758	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	321	1	321	-1	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGATGTCTTTAGTGTCT	NA	False	NA	13	True	AATAAA	-22	NA	88567250	88579955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
Isoform_36553_71	chr1	-	1405	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	333	-3	-1	3	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTAATCTTGTT	NA	False	NA	-13	True	AATAAA	-23	NA	153425458	153378757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
Isoform_36554_3	chr1	-	1546	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	202	-13	-132	13	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGTTTCAAAGGTTT	NA	False	NA	-3	True	AATAAA	-33	NA	153425589	153378747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
Isoform_36555_3	chr1	-	4953	10	FSM	ENSMUSG00000033722.10	ENSMUST00000186156.7	4873	10	-83	3	-83	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.14878662286819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTGGATTCTGTCTT	8244	False	NA	NA	False	ATTAAA	-22	NA	155120273	155088219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155089460_155093127_155093313_155094005_155094134_155097080_155097334_155099020_155099178_155100656_155102195_155108191_155108336_155116481_155116546_155117170_155118073_155119931
Isoform_36556_25	chr1	-	2461	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	-27	-1	18	1	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACGTGTTTGACTTGA	NA	False	NA	-4	True	AATAAA	-20	NA	155688617	155653906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
Isoform_36557_3	chr1	-	3337	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	11	0	11	0	multi-exon	FALSE	canonical	3	21	junction_6	6.25887799202127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	False	NA	-1	True	AATAAA	-23	NA	155688624	155653903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
Isoform_36558_12	chr1	-	1669	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	506	548	76	-1	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCCTAATTATCTGTGA	NA	False	NA	NA	False	AGTAAA	-35	NA	155911720	155882527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_36559_8	chr1	-	1758	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	415	550	-15	-3	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGCCTAATTATCTGT	NA	False	NA	NA	False	AGTAAA	-33	NA	155911811	155882529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_36560_5	chr1	-	2022	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	467	1745	90	-125	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAGGAAGAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	155911706	155882104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_36562_4	chr1	-	1710	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	357	2167	-20	0	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911816	155882526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
Isoform_36563_3	chr1	-	3814	6	NNC	ENSMUSG00000015484.4	novel	3882	5	NA	NA	-62	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.35646599662505	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGAGGGTCTTCCTT	4785	False	NA	NA	False	AATAAA	-19	NA	156032658	155951708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_155952557_155952584_155955057_155955697_155955813_155957137_155957160_155963534_155963633_156032399
Isoform_36564_27	chr1	-	3016	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	91	5264	0	4	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTACTCATATGTGACA	1790	False	NA	-2	True	AATAAA	-24	NA	156301810	156257358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
Isoform_36565_13	chr1	-	3108	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	-4	5267	-4	1	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATGTACTCATATGTG	1695	False	NA	-5	True	AATAAA	-21	NA	156301905	156257361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
Isoform_36567_5	chr1	-	3034	4	ISM	ENSMUSG00000060519.12	ENSMUST00000156861.8	3545	6	4551	1	-3044	-1	3prime_fragment	FALSE	canonical	3	47	junction_2	7.36357401145817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGATGGTTCTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	156497344	156481187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940
Isoform_36570_26	chr1	-	3264	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	20	1	-1	-1	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGATGGTTCTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	156501906	156481187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
Isoform_36574_14	chr1	-	4446	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	73	13	73	-13	multi-exon	FALSE	canonical	3	105	junction_8	37.6710681425414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	156546569	156506114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
Isoform_36577_6	chr1	-	4391	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	47	-24	33	-15	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATTGTATAATGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	156546609	156506116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
Isoform_36578_13	chr1	-	4310	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	131	-27	117	-12	multi-exon	TRUE	canonical	3	86	junction_7	39.1298205610869	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTATAATGTCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	156546525	156506113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
Isoform_36579_32	chr1	-	2292	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-58	713	4	1	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAACTTTGTACTA	NA	False	NA	-5	True	AATAAA	-17	NA	156767159	156636398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36580_15	chr1	-	2995	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-58	10	4	-4	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAACCTTTTCTTG	NA	False	NA	-41	True	AATAAA	-28	NA	156767159	156635695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36581_4	chr1	-	3075	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-138	10	-43	-4	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAACCTTTTCTTG	NA	False	NA	-41	True	AATAAA	-28	NA	156767239	156635695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36583_3	chr1	-	2320	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	7	2071	1	-1	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTTTAACTTTGTAC	NA	False	NA	-7	True	AATAAA	-15	NA	156767162	156636400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36584_3	chr1	-	3017	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	10	1371	4	-9	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAATATAAAACCTTT	NA	False	NA	-46	True	AATAAA	-23	NA	156767159	156635700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36585_53	chr1	-	2214	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-46	2069	4	1	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAACTTTGTACTA	NA	False	NA	-5	True	AATAAA	-17	NA	156767159	156636398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36586_13	chr1	-	2969	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-92	1360	-9	2	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTCTTGTATGAC	NA	False	NA	-35	True	AATAAA	-34	NA	156767205	156635689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36588_35	chr1	-	2915	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-46	1368	4	-6	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATAAAACCTTTTCT	NA	False	NA	-43	True	AATAAA	-26	NA	156767159	156635697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
Isoform_36591_36	chr1	-	1805	8	ISM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-661	35460	0	-15	5prime_fragment	FALSE	canonical	2	7	junction_1	2.84999104903714	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAGGACA	4366	False	NA	NA	False	NA	NA	NA	157240165	157003563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
Isoform_36594_393	chr1	-	1485	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	54	559	-16	-559	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATGAGTTCTGCAAT	7350	False	NA	-10	True	AATAAA	-15	NA	160040391	160030495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
Isoform_36597_190	chr1	-	1541	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	0	557	0	-557	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTTCTGCAATCT	7296	False	NA	-8	True	AATAAA	-17	NA	160040445	160030493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
Isoform_36610_4	chr1	-	2948	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-4	675	-4	-86	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATTCTATTGTGTTG	NA	False	NA	NA	False	AATATA	-45	NA	160898232	160868845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
Isoform_36611_14	chr1	-	2156	17	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-5	-14	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	96.678510409501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTCTTTATTGAGT	NA	False	NA	-30	True	AATGAA	-12	NA	160898233	160869088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160898112
Isoform_36614_7	chr1	-	2622	14	FSM	ENSMUSG00000026709.11	ENSMUST00000160591.8	2126	14	-35	-461	0	461	multi-exon	FALSE	canonical	3	321	junction_2	32.3146512651852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	160898212	160872291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
Isoform_36616_27	chr1	-	4019	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	33	20	33	3	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTAATTTTTAAA	NA	False	NA	-17	True	AATAAA	-17	NA	160959048	160915964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
Isoform_36617_4	chr1	-	2046	8	FSM	ENSMUSG00000026705.17	ENSMUST00000148952.8	4182	8	53	2083	-16	1591	multi-exon	FALSE	canonical	3	82	junction_4	11.5387545750335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGTGTGACTTTGTG	NA	False	NA	NA	False	NA	NA	NA	160959028	160926097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
Isoform_36620_44	chr1	-	1545	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	0	-586	0	3	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078736	161068581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
Isoform_36624_842	chr1	-	1434	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	53	900	0	3	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078736	161068581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
Isoform_36627_111	chr1	-	1464	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	23	900	-10	3	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078766	161068581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
Isoform_3663_6	chr10	+	5098	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	89580866	89654263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_36631_18	chr1	-	1277	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	20	-3	0	3	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTTGTCATGTTTTAA	NA	False	NA	-8	True	AATAAA	-13	NA	161078736	161068581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
Isoform_36632_3	chr1	-	750	3	ISM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-191	46114	-191	-9399	5prime_fragment	FALSE	canonical	3	137	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGGATGACTA	227	False	NA	NA	False	NA	NA	NA	161704442	161689796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_161689872_161691482_161691595_161703879
Isoform_36633_3	chr1	-	546	3	ISM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	7	46120	7	-9405	5prime_fragment	FALSE	canonical	3	137	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAACAAAATAAAGGA	425	False	NA	NA	False	NA	NA	NA	161704244	161689802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_161689872_161691482_161691595_161703879
Isoform_36634_3	chr1	-	641	2	ISM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-164	47807	-164	-11092	5prime_fragment	FALSE	canonical	3	137	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGTACCTTAAATGG	254	False	NA	-1	True	NA	NA	NA	161704415	161691489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_161691595_161703879
Isoform_36635_174	chr1	-	2971	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	24	1546	1	6	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTATCTCAAGTA	NA	False	NA	-5	True	NA	NA	NA	162376096	162361241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
Isoform_36636_5	chr1	-	3404	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	13	1124	0	428	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATGTTCTCAGATTATA	NA	False	NA	NA	False	TTTAAA	-24	NA	162376107	162360819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
Isoform_36637_3	chr1	-	2794	9	NNC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	2	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	32.4884594894864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGGTTTATCTCAA	NA	False	NA	-8	True	NA	NA	NA	162376089	162361244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672_162375892_162376058
Isoform_36638_3	chr1	-	4529	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	13	-1	0	1	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTTTTTTGTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	162376107	162359694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
Isoform_36639_22	chr1	-	2512	8	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	30.8399422959306	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTATCTCAAGTA	NA	False	NA	-5	True	NA	NA	NA	162376097	162361241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373796_162374097_162375672
Isoform_36640_7	chr1	-	2331	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	-4	11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	33.2536547698979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATCTCAAGTATTTTT	NA	False	NA	0	True	NA	NA	NA	162376111	162361236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162373796_162374097_162375672
Isoform_36650_3	chr1	-	2054	12	NIC	ENSMUSG00000040225.16	novel	1827	12	NA	NA	3	78	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	9.98014557935524	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTATGGTGCCCCAC	3423	False	NA	NA	False	AAGAAA	-16	NA	162568116	162537857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
Isoform_36660_16	chr1	-	2512	5	NIC	ENSMUSG00000040124.6	novel	2538	5	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	29.2179311382582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	False	NA	-1	True	AATAAA	-18	NA	163231208	163212476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_163214267_163219978_163220120_163222159_163222262_163224376_163224739_163231091
Isoform_36662_81	chr1	-	2541	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	False	NA	-1	True	AATAAA	-18	NA	163231241	163212476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
Isoform_36665_250	chr1	-	2904	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	18	257	-14	-257	multi-exon	FALSE	canonical	2	170	junction_8	40.7878461455702	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATCTTTATTTGAC	NA	False	NA	NA	False	CATAAA	-18	NA	163822347	163781579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
Isoform_36666_3	chr1	-	3182	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	-5	2	-5	-2	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGCTTACCAGCTTG	NA	False	NA	NA	False	AATAGA	-27	NA	163822370	163781324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
Isoform_36668_27	chr1	-	2412	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	236	-218	19	218	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164134822	164118739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_36669_16	chr1	-	2646	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	2	-218	2	218	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135056	164118739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_3667_47	chr10	+	4957	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	21	1470	21	-1	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	89580873	89654263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_36675_4	chr1	-	2457	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	-29	2	-29	-2	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATAAGGTGCTCATTT	NA	False	NA	-7	True	ATTAAA	-14	NA	164135087	164118959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
Isoform_36679_5	chr1	-	2559	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	2	-959	2	218	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135056	164118739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
Isoform_3668_3	chr10	+	5922	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	23	-1	intron_retention	FALSE	canonical	3	116	junction_11	11.7109698319325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	89580875	89654263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_36682_827	chr1	-	2581	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285925	164264677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
Isoform_36688_48	chr1	-	2629	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-49	0	-49	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285973	164264677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
Isoform_3669_4	chr10	+	4818	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	89580870	89654263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
Isoform_3670_13	chr10	+	3242	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-11	1	-11	-1	multi-exon	FALSE	canonical	3	50	junction_2	27	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATAGAGAGTACTGTCCA	744	False	NA	12	True	AATAAA	-18	NA	90918907	90934518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_90919159_90929000_90929119_90931645
Isoform_36707_4	chr1	-	1096	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	88	4351	-29	550	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTCTCTTGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	165021919	165006256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
Isoform_36709_69	chr1	-	1740	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	6	2634	-5	662	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTTGCTGTTTATTTC	NA	False	NA	-3	True	AATAAA	-20	NA	165064506	165042488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
Isoform_36715_417	chr1	-	2284	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	-1	2	-1	-2	multi-exon	FALSE	canonical	3	372	junction_2	205.630737002035	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462099	165419810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_36716_11	chr1	-	2341	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	-1	-55	-1	55	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCATTGCAGCTGCACA	NA	False	NA	54	True	GATAAA	-12	NA	165462099	165419753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_36717_378	chr1	-	2179	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-9	1	-1	-1	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTTGTCTGCTTGTTT	NA	False	NA	-2	True	AATACA	-18	NA	165462099	165419809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
Isoform_36721_3	chr1	-	2109	2	ISM	ENSMUSG00000040723.15	ENSMUST00000040357.11	2622	7	51901	-2	51901	2	3prime_fragment	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	0	True	AATAAA	-13	NA	165483716	165476513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_165477780_165482873
Isoform_36722_44	chr1	-	2529	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51023	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	0	True	AATAAA	-13	NA	165484594	165476513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_165477780_165482873_165483606_165484063
Isoform_36723_3	chr1	-	2820	19	NIC	ENSMUSG00000026565.19	novel	2679	17	NA	NA	0	4	intron_retention	FALSE	canonical	1	1	junction_16	7.97836580934055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTAAAAGAAAAAAA	9694	False	NA	-5	True	NA	NA	NA	165830198	165703052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165773470_165773572_165780349_165780426_165830130
Isoform_36724_3	chr1	-	2753	18	NIC	ENSMUSG00000026565.19	novel	2679	17	NA	NA	0	13	intron_retention	FALSE	canonical	0	0	junction_17	7.77272313372185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAAG	9694	False	NA	4	True	NA	NA	NA	165830198	165703043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165773470_165773572_165830130
Isoform_36726_20	chr1	-	2643	17	FSM	ENSMUSG00000026565.19	ENSMUST00000160260.9	13022	17	49	10330	0	4	multi-exon	FALSE	canonical	2	8	junction_3	5.36153837531729	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTAAAAGAAAAAAA	9694	False	NA	-5	True	NA	NA	NA	165830198	165703052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_36728_28	chr1	-	2571	16	FSM	ENSMUSG00000026565.19	ENSMUST00000160908.8	2591	16	-7	27	0	4	multi-exon	FALSE	canonical	3	10	junction_7	5.03940031705713	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTAAAAGAAAAAAA	9694	False	NA	-5	True	NA	NA	NA	165830198	165703052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_36729_4	chr1	-	1755	6	ISM	ENSMUSG00000026565.19	ENSMUST00000177472.2	2335	13	-14	19102	0	1189	5prime_fragment	FALSE	canonical	3	13	junction_5	3.3466401061363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAACAAAA	9694	False	NA	NA	False	NA	NA	NA	165830198	165737702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
Isoform_36730_47	chr1	-	3912	5	ISM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	695	-1	695	1	3prime_fragment	FALSE	canonical	3	43	junction_3	2.77263412660235	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTTCATTCTGGTC	NA	False	NA	-5	True	ATTAAA	-15	NA	165954770	165925720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638
Isoform_36731_8	chr1	-	4055	6	FSM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	-14	4	-14	1	multi-exon	FALSE	canonical	1	3	junction_5	17.4768418199628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTTCATTCTGGTC	NA	False	NA	-5	True	ATTAAA	-15	NA	165955505	165925720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360
Isoform_36732_7	chr1	-	1550	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	-5	1	-2	-1	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGCACTCTTGCTTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	166066318	166028954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
Isoform_36735_441	chr1	-	4466	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	262	3	-174	-3	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCTTTGTGGGTGCCT	NA	False	NA	-3	True	AATAAA	-29	NA	167112627	167050454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
Isoform_3674_28	chr10	+	1229	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	105	-6	-12	6	multi-exon	FALSE	canonical	3	39	junction_2	32.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCCATAATATTTTT	743	False	NA	18	True	AATAAA	-23	NA	90918906	90938475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_90919159_90929000_90929119_90937616
Isoform_36748_466	chr1	-	636	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	44	417	44	-417	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCTGCCTGCATCTCT	5000	False	NA	-2	True	AATAAA	-29	NA	167221366	167199951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
Isoform_36749_124	chr1	-	679	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	0	418	0	-418	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCCTGCCTGCATCTC	4956	False	NA	-3	True	AATAAA	-28	NA	167221410	167199952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
Isoform_3675_9	chr10	+	4418	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-247	-12	-232	12	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCACTGTTCTTTATTG	NA	False	NA	27	True	TATAAA	-14	NA	92996504	93077202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
Isoform_36751_42	chr1	-	2060	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	8	0	-2	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358989	169325879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_36753_3	chr1	-	2624	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-39	-517	-3	140	multi-exon	TRUE	canonical	3	87	junction_14	29.0531708199618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAGAAAATCAAGAA	NA	False	NA	NA	False	NA	NA	NA	169359036	169325362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_36754_20	chr1	-	2030	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	-2	377	-2	0	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169359035	169325879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_36755_23	chr1	-	1982	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	50	373	-3	4	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCCAGGATGTTGTTT	NA	False	NA	-5	True	AATAAA	-30	NA	169358983	169325875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_36757_3	chr1	-	1314	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	-43	0	10	0	multi-exon	FALSE	canonical	3	87	junction_10	33.1324614238061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAAGTGTGGGTTTTT	NA	False	NA	-3	True	AATACA	-15	NA	169359023	169337685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
Isoform_36758_4	chr1	-	1213	10	ISM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	34	12184	-2	-1	5prime_fragment	FALSE	canonical	3	65	junction_9	38.1284379142101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAAGTGTGGGTTTT	NA	False	NA	-4	True	AATACA	-14	NA	169358999	169337686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
Isoform_3676_49	chr10	+	3836	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-211	-10	-196	10	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCACTGTTCTTTAT	NA	False	NA	25	True	TATAAA	-12	NA	92996540	93077200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
Isoform_36762_3	chr1	-	4535	10	NNC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	50	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.917828652983	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGACTCAGTT	NA	False	NA	-6	True	AATAAA	-13	NA	169796760	169777108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_169777761_169777782_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
Isoform_36763_5	chr1	-	4550	10	NNC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	31	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.917828652983	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTTTTAGACTCAGT	NA	False	NA	-7	True	AATAAA	-12	NA	169796779	169777109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_169777761_169777785_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
Isoform_36764_5	chr1	-	1375	9	NNC	ENSMUSG00000026675.13	novel	1446	8	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.8885672212687	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTCTCTGTGATCTTA	NA	False	NA	NA	False	AATAAA	-25	NA	169796760	169783068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_169783137_169783158_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
Isoform_36766_67	chr1	-	2251	11	FSM	ENSMUSG00000026670.16	ENSMUST00000027981.8	2283	11	34	-2	-26	1	multi-exon	FALSE	canonical	3	59	junction_3	76.9519330491444	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTACCTTAAG	NA	False	NA	-3	True	AATAAA	-17	NA	170002481	169969569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_36767_327	chr1	-	2257	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	30	0	30	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002485	169969570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_36770_70	chr1	-	2261	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-13	63	-13	1	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTACCTTAAG	NA	False	NA	-3	True	AATAAA	-17	NA	170002539	169969569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_36771_121	chr1	-	2202	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	45	64	-26	0	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002481	169969570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
Isoform_36774_19	chr1	-	4514	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	3	2729	3	-2729	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCTCAGTGGTTAAC	NA	False	NA	NA	False	AATAAA	-12	NA	170695337	170534971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_36776_6	chr1	-	4728	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	-19	2537	-19	-2537	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	170695359	170534779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_36779_8	chr1	-	4517	16	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-1	-2727	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.5630926155453	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTCAGTGGTTAACTT	NA	False	NA	NA	False	AATAAA	-14	NA	170695341	170534969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_170537657_170574674_170574760_170614914_170615027_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
Isoform_36780_112	chr1	-	1284	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	90	0	7	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170713019	170701756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
Isoform_36781_53	chr1	-	1265	6	FSM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-22	-332	-11	0	multi-exon	FALSE	canonical	3	124	junction_5	89.0002247188174	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170712987	170701756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
Isoform_36782_4	chr1	-	1444	7	FSM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	10	8	10	-8	multi-exon	FALSE	canonical	3	21	junction_6	22.7943706500823	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAACCATCTTTCTAT	NA	False	NA	NA	False	AGTAAA	-9	NA	170803686	170788134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
Isoform_36783_50	chr1	-	1298	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	-25	25	-25	-4	multi-exon	FALSE	canonical	3	151	junction_2	7.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170885648	170878767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170879422_170881507_170881763_170885259
Isoform_36786_4	chr1	-	1192	4	ISM	ENSMUSG00000059498.14	ENSMUST00000164044.8	1347	5	793	24	-556	-4	3prime_fragment	FALSE	canonical	3	16	junction_3	67.4536878161602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170886179	170878767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154
Isoform_36787_4	chr1	-	1617	7	NNC	ENSMUSG00000059498.14	novel	1347	5	NA	NA	-1310	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	70.3980744686166	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAAAAAATCAACGGT	NA	False	NA	-32	True	NA	NA	NA	170888282	170878767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154_170886176_170886837_170886964_170887195_170887296_170888079
Isoform_36789_16	chr1	-	1251	6	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	366.673369635702	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978048
Isoform_36790_688	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
Isoform_36792_8	chr1	-	1113	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	241	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	410.610825478335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGACTCTTTGGAAT	456	False	NA	-8	True	ATTAAA	-14	NA	170978172	170956734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170978127
Isoform_36794_9	chr1	-	1007	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	242	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	373.85324660888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGACTCTTTGGAATC	456	False	NA	-7	True	ATTAAA	-15	NA	170978172	170956733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324_170973382_170978127
Isoform_36795_3	chr1	-	1058	3	FSM	ENSMUSG00000038370.7	ENSMUST00000111332.2	1577	3	32	487	32	-487	multi-exon	FALSE	canonical	1	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	171023805	171001317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171002095_171003138_171003194_171023579
Isoform_36796_3	chr1	-	1125	6	ISM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	1218	1305	1218	-744	3prime_fragment	FALSE	canonical	3	111	junction_2	8.00999375780031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTCTCCATTCCTC	9843	False	NA	96	True	AAAAAG	-17	NA	171048535	171046675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373
Isoform_36798_3	chr1	-	1452	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	-1	-746	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGTTTCTCCATTCC	9571	False	NA	94	True	AAAAAG	-15	NA	171050021	171046677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
Isoform_36799_5	chr1	-	1342	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-852	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTTATTTTTGTT	9575	False	NA	-12	True	AGTAAA	-41	NA	171050017	171046783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
Isoform_3680_189	chr10	+	2018	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	12	-1	12	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289284	93320737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
Isoform_36800_68	chr1	-	1546	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	66	3100	0	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9575	False	NA	92	True	AAAAAG	-13	NA	171050017	171046679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_36801_3	chr1	-	2858	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	63	1791	0	0	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	9572	False	NA	NA	False	AGTAAA	-16	NA	171050020	171045370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_36803_11	chr1	-	1612	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	0	3100	0	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9509	False	NA	92	True	AAAAAG	-13	NA	171050083	171046679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
Isoform_36809_1335	chr1	-	1604	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	15	4	15	-4	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	1335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTTGTAATGTGTCTT	NA	False	NA	-5	True	ATTAAA	-24	NA	171074676	171062425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
Isoform_36813_15	chr1	-	1827	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	-4	-2	-4	2	multi-exon	TRUE	canonical	3	37	junction_8	32.2076595444831	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTTTACTATTCATCA	5185	False	NA	-13	True	AGTAAA	-18	NA	171108764	171104562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36814_21	chr1	-	1765	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	54	2	-13	-2	multi-exon	FALSE	canonical	3	37	junction_8	32.2076595444831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5243	False	NA	-17	True	AGTAAA	-14	NA	171108706	171104566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36815_3	chr1	-	1836	13	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	36.6727267719335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5188	False	NA	-17	True	AGTAAA	-14	NA	171108761	171104566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107846_171107961_171108097_171108247_171108343_171108446
Isoform_36816_7	chr1	-	2092	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_8	28.8272440583556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171108097_171108247_171108343_171108446
Isoform_36817_4	chr1	-	1531	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	36.54257790578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5230	False	NA	-15	True	AGTAAA	-16	NA	171108719	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107961_171108097_171108247_171108343_171108446
Isoform_36818_4	chr1	-	2116	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	42	junction_9	30.0522960165736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36819_8	chr1	-	2254	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	42	junction_8	27.874002224295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36820_17	chr1	-	2371	10	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	14	0	intron_retention	FALSE	canonical	3	53	junction_6	23.0656604361988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5203	False	NA	-15	True	AGTAAA	-16	NA	171108746	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_36822_5	chr1	-	2220	11	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	10	junction_8	34.6502525243323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5238	False	NA	-15	True	AGTAAA	-16	NA	171108711	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107846_171107961_171108097_171108247_171108343_171108446
Isoform_36823_6	chr1	-	3132	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	42	junction_7	25.6471787488951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5238	False	NA	-15	True	AGTAAA	-16	NA	171108711	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36824_5	chr1	-	3200	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-19	0	intron_retention	FALSE	canonical	3	42	junction_7	25.6471787488951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5170	False	NA	-15	True	AGTAAA	-16	NA	171108779	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
Isoform_36825_25	chr1	-	3313	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	87	junction_7	17.1386806668425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCTCTTTACTATTCA	5188	False	NA	-16	True	AGTAAA	-15	NA	171108761	171104565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_36827_3	chr1	-	3197	10	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	10	junction_7	34.051522327783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCTCTTTACTATTCA	5188	False	NA	-16	True	AGTAAA	-15	NA	171108761	171104565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107846_171107961_171108097_171108247_171108343_171108446
Isoform_36828_5	chr1	-	3446	8	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	87	junction_6	17.9261523695273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_36829_4	chr1	-	3411	8	FSM	ENSMUSG00000062729.13	ENSMUST00000155083.9	4412	8	-1	1002	-1	0	multi-exon	FALSE	canonical	3	87	junction_6	18.2633792165679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
Isoform_36830_884	chr1	-	2158	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	52	9	-15	4	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115512	171109527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_36831_128	chr1	-	2180	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	30	9	-2	4	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115534	171109527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_36833_22	chr1	-	1897	13	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-15	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	150.066721272017	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115512	171109527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171114183_171114544_171115334
Isoform_36834_45	chr1	-	2114	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	156.020077114485	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115528	171109527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113922_171114544_171115334
Isoform_36835_17	chr1	-	2386	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	4	intron_retention	FALSE	canonical	3	297	junction_10	47.5590976427754	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGATGTTCATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	171115528	171109527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
Isoform_36838_15	chr1	-	993	7	FSM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	-40	-131	6	0	multi-exon	FALSE	canonical	3	36	junction_3	228.930423685645	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7326	False	NA	0	True	AATAAA	-18	NA	171122554	171116135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206_171122401_171122493
Isoform_36842_147	chr1	-	963	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	44	0	7	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7327	False	NA	0	True	AATAAA	-18	NA	171122553	171116135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
Isoform_36843_13	chr1	-	1882	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	20	0	0	0	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	899	False	NA	-10	True	AATATA	-8	NA	171173193	171169811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
Isoform_36845_5	chr1	-	1687	7	NNC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_6	51.8652099195598	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	883	False	NA	-10	True	AATATA	-8	NA	171173209	171169811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172779
Isoform_36846_11	chr1	-	1673	7	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	19	0	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	918	False	NA	-10	True	AATATA	-8	NA	171173174	171169811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
Isoform_36847_18	chr1	-	1367	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	1	1673	0	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	879	False	NA	-10	True	AATATA	-8	NA	171173213	171169811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
Isoform_36848_10	chr1	-	3010	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	-3	-1672	-2	-1	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTTGACTTGGTTC	876	False	NA	1	True	ATTAAA	-22	NA	171173216	171168139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
Isoform_36849_97	chr1	-	1338	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	4	-7	-1	7	multi-exon	FALSE	canonical	3	74	junction_6	27.0025718939676	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATGTCTTTTGGGGGC	883	False	NA	-3	True	AATATA	-15	NA	171173209	171169804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
Isoform_3685_31	chr10	+	1936	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289283	93320737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
Isoform_36852_3	chr1	-	2000	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	17	915	2	0	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	901	False	NA	-10	True	AATATA	-8	NA	171173191	171169811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
Isoform_36853_13	chr1	-	1283	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	1	274	1	-274	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTTTTGTCTCTGAAT	7872	False	NA	NA	False	ATTAAA	-9	NA	171188365	171186287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
Isoform_36856_247	chr1	-	2278	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	9	3411	9	58	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAACCACCCTGCCCT	NA	False	NA	-10	True	GATAAA	-15	NA	171854853	171831937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
Isoform_36863_19	chr1	-	2907	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	102	7	102	-7	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9098	False	NA	43	True	ATTAAA	-14	NA	171910260	171893586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
Isoform_36865_826	chr1	-	2789	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	105	7	105	-7	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9101	False	NA	43	True	ATTAAA	-14	NA	171910257	171893586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
Isoform_36866_77	chr1	-	2862	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	32	7	32	-7	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9028	False	NA	43	True	ATTAAA	-14	NA	171910330	171893586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
Isoform_3687_11	chr10	+	2297	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	300	2722	265	-84	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCACAAT	NA	False	NA	NA	False	TATAAA	-12	NA	93324929	93352444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
Isoform_36871_30	chr1	-	2408	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	93	0	-14	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034278	172024294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
Isoform_36875_5	chr1	-	2762	17	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	8535	2774	8535	60	3prime_fragment	FALSE	canonical	3	101	junction_15	22.0204982629822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172117096	172102049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867
Isoform_36878_20	chr1	-	3394	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	2833	0	1	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCCACAGGTCCCGCT	NA	False	NA	-13	True	AATAAA	-19	NA	172125631	172102108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_36879_11	chr1	-	3859	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	2	2366	2	468	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGGAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	172125629	172101641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_3688_4	chr10	+	3890	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-35	1332	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669644	93695282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
Isoform_36880_11	chr1	-	3793	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	65	2369	65	465	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	172125566	172101644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_36881_19	chr1	-	3453	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	2774	0	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172125631	172102049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
Isoform_36887_674	chr1	-	1598	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	29	1009	29	1	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGACCTTTTTAAAATT	821	False	NA	-21	True	AATAAA	-32	NA	175453172	175428948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
Isoform_36890_13	chr1	-	1787	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	119	7	119	-7	multi-exon	FALSE	canonical	3	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAAGGCTGTTGTCATG	NA	False	NA	NA	False	AATAAA	-23	NA	175520223	175489993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
Isoform_36891_3	chr1	-	4770	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-187	323	-187	-323	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTCATCGAGTCACCTC	NA	False	NA	-7	True	AATAAA	-15	NA	177085956	176850004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
Isoform_36892_413	chr1	-	2532	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	25	214	15	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624052	177590741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
Isoform_36894_11	chr1	-	2722	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	-166	215	-166	-1	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624243	177590742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
Isoform_36895_30	chr1	-	2578	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	-21	214	-21	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624098	177590741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
Isoform_369_1209	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
Isoform_3690_3	chr10	+	4597	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	102	3345	102	2123	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGGTCATAACTGTTT	NA	False	NA	2	True	ATTAAA	-14	NA	93871964	93977856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
Isoform_36903_7	chr1	-	2491	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_9	304.563310195689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624062	177590741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177611614_177611684_177612461_177612565_177623777
Isoform_3691_11	chr10	+	2344	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-142	1530	-142	0	multi-exon	FALSE	canonical	3	23	junction_4	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	False	NA	0	True	AATAAA	-16	NA	93983742	94031543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_36911_945	chr1	-	3401	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	4227	12	3296	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTTGTCTAATGGGA	NA	False	NA	-7	True	ATTAAA	-14	NA	178165350	178156134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_36912_1777	chr1	-	2935	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	4693	12	2830	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTTTATTAAGC	NA	False	NA	-6	True	AGTAAA	-14	NA	178165350	178156600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_36914_301	chr1	-	3675	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	9	3956	9	-3467	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165353	178155863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
Isoform_3692_39	chr10	+	2286	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-84	1530	-84	0	multi-exon	FALSE	canonical	3	23	junction_4	6	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	False	NA	0	True	AATAAA	-16	NA	93983800	94031543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_3693_4	chr10	+	3818	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-86	0	-86	0	multi-exon	FALSE	canonical	3	23	junction_4	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTCTGTATCCTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	93983798	94033073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
Isoform_3694_18	chr10	+	535	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	33	-2	0	2	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTTGTGCGTTCACA	NA	False	NA	15	True	ATTAAA	-15	NA	94034898	94056812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
Isoform_3695_9	chr10	+	448	3	NIC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	1952.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94034896	94056811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_94034993_94035811_94035895_94056542
Isoform_36953_7	chr1	-	2751	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	17	4103	-12	-912	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGACTCCTTCACTGG	NA	False	NA	NA	False	NA	NA	NA	179345582	178783627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36954_19	chr1	-	2009	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	15	4847	-14	443	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGCCTCCATTTATTT	NA	False	NA	NA	False	AATACA	-30	NA	179345584	178784371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36955_289	chr1	-	1564	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	15	5292	-14	-2	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCGACTTGGCTTTGC	NA	False	NA	-7	True	AATAAA	-24	NA	179345584	178784816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36956_4	chr1	-	3791	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	-6	3086	1	0	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	179345605	178782610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36958_5	chr1	-	1467	11	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	17	20012	-12	-14722	5prime_fragment	FALSE	canonical	3	351	junction_9	34.0501101319805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGACTCAACCTGCTTA	NA	False	NA	NA	False	GATAAA	-33	NA	179345582	178799536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36959_5	chr1	-	2391	7	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	26	139274	-3	-133984	5prime_fragment	FALSE	canonical	3	351	junction_5	36.8076833766478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTTGGCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	179345573	178918798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36960_9	chr1	-	2025	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	29	-825	-7	825	multi-exon	FALSE	canonical	2	9	junction_1	165.062412438447	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTTTTTTCCTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	179345577	179221963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_36961_3	chr1	-	2446	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	1	2	1	-2	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTGTATATGTGT	7879	False	NA	NA	False	AATAAA	-13	NA	179373831	179355621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
Isoform_36962_6	chr1	-	2422	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	26	1	-24	-1	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7904	False	NA	NA	False	AATAAA	-14	NA	179373806	179355620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
Isoform_36964_17	chr1	-	4763	32	ISM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	27	10663	27	-1858	5prime_fragment	FALSE	canonical	3	225	junction_15	17.1546191253583	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTAAAAGAAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	179631218	179583121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
Isoform_36966_3	chr1	-	808	2	FSM	ENSMUSG00000026491.14	ENSMUST00000147137.2	746	2	-55	-7	19	1	multi-exon	FALSE	canonical	3	284	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	NA	False	NA	NA	False	NA	NA	NA	179631226	179626404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_179626904_179630917
Isoform_36967_28	chr1	-	2636	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	14	1376	14	405	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATGCGTTCCGTGAA	3879	False	NA	-2	True	AATAAA	-22	NA	180023571	179994178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
Isoform_36972_8	chr1	-	1938	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	56	3	0	-1	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTGGTGTTTGGCCCC	NA	False	NA	-1	True	AATAAA	-16	NA	180083809	180054571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_36973_34	chr1	-	1480	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	56	461	0	3	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	180083809	180055029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_36974_4	chr1	-	1536	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	0	461	0	3	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	180083865	180055029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
Isoform_36976_463	chr1	-	1036	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	71	1734	-14	131	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTCTGGTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	180641126	180630130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
Isoform_36979_22	chr1	-	919	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	32	1890	3	-25	multi-exon	FALSE	canonical	3	2337	junction_3	156.5907617539	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATGGTGTTTGTAGCA	NA	False	NA	NA	False	AGTAAA	-17	NA	180641165	180630286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
Isoform_3698_13	chr10	+	3365	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	-4	2169	-4	1	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	94350714	94424649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
Isoform_36982_43	chr1	-	1703	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	38	0	38	0	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGCCAGATACCTT	5766	False	NA	-3	True	GATAAA	-18	NA	180845096	180817118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
Isoform_36983_86	chr1	-	3091	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	19	6282	19	-161	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATCTATTAACATCTGA	NA	False	NA	-3	True	AATAAA	-20	NA	180971750	180920984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_36984_11	chr1	-	3713	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	5662	17	459	multi-exon	TRUE	canonical	3	480	junction_18	71.7805568876937	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACCTTTCTGATAGACA	NA	False	NA	-22	True	TATAAA	-19	NA	180971752	180920364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_36985_41	chr1	-	3506	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	47	5839	47	282	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGCCATGCCAGA	NA	False	NA	-26	True	GATAAA	-32	NA	180971722	180920541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_3699_6	chr10	+	837	3	ISM	ENSMUSG00000020024.8	ENSMUST00000220352.2	1842	4	-86	2028	-22	-2028	5prime_fragment	FALSE	canonical	3	176	junction_2	18	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATTATATTTGAATTTA	9482	False	NA	NA	False	AATGAA	-11	NA	94524493	94555607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_94524909_94554713_94554982_94555453
Isoform_36990_6	chr1	-	1977	14	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	19	26837	19	-17993	5prime_fragment	FALSE	canonical	3	480	junction_9	88.1404876440457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGTGTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	180971750	180941539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_36991_3	chr1	-	1284	10	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	39655	17	9361	5prime_fragment	FALSE	canonical	3	480	junction_5	102.937953264198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTCTTGGCTATGTCA	NA	False	NA	NA	False	TTTAAA	-15	NA	180971752	180954357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
Isoform_36995_4	chr1	-	3166	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	1	3878	1	-9	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTCATTTGTATACAT	NA	False	NA	-29	True	AATAAA	-25	NA	181039542	181004670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_36997_4	chr1	-	3117	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-546	3881	-5	-16	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAGTGACTTCATTTG	NA	False	NA	-36	True	AATAAA	-18	NA	181039548	181004677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_36999_3	chr1	-	2651	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	42.1032824199319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTTACAGATTGTTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	181039512	181007972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
Isoform_37_4	ERCC-00039	+	721	1	FSM	ERCC-00039A	DQ883656	724	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GC	NA	False	NA	NA	False	NA	NA	NA	1	722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00039_+_0_700
Isoform_37000_15	chr1	-	2630	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	34.0406996222056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATGACTTACAGATTG	NA	False	NA	NA	False	AGTAAA	-16	NA	181039543	181007976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
Isoform_37014_1260	chr1	-	3494	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	36	-20	-17	20	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669908	181642879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
Isoform_37015_365	chr1	-	3529	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	1	-20	1	20	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669943	181642879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
Isoform_37028_4	chr1	-	4449	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	13	-857	3	857	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGTATCTGTATCCT	5646	False	NA	-4	True	NA	NA	NA	181847542	181731107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_3703_7	chr10	+	3032	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	92	515	28	145	multi-exon	TRUE	canonical	0	0	junction_13	58.1305045183297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTGTTTAATTTTCC	9596	False	NA	8	True	AATAAA	-17	NA	94524607	94626200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
Isoform_37037_3	chr1	-	1963	5	ISM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-309	17235	10	451	5prime_fragment	FALSE	canonical	3	327	junction_2	38.0419176698547	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTTGTAGAGGATAAATT	5653	False	NA	NA	False	AATAAA	-17	NA	181847535	181750312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
Isoform_37040_29	chr1	-	1823	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	32	193	32	-193	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTAGTGGAATTTCTTT	NA	False	NA	-6	True	NA	NA	NA	182110337	182103529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182104459_182106540_182107284_182110186
Isoform_37042_6	chr1	-	1433	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	-24	-4	-24	4	multi-exon	FALSE	canonical	3	1179	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	182110393	182106057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182107284_182110186
Isoform_37043_12	chr1	-	1377	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	32	-4	32	4	multi-exon	FALSE	canonical	3	1179	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	182110337	182106057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182107284_182110186
Isoform_37045_62	chr1	-	2832	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	4	2089	4	-3	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGTCAGCAAGGTC	NA	False	NA	-4	True	AATAAA	-12	NA	182169179	182142755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_37047_3	chr1	-	4925	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182169183	182140666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_37048_6	chr1	-	3940	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	985	0	-985	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCTGGATTTTTTAGA	NA	False	NA	-21	True	AATAAA	-19	NA	182169183	182141651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
Isoform_37050_19	chr1	-	4983	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-2	3	-2	-3	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACCTGTCTCCGTCGT	NA	False	NA	-1	True	AATAAA	-31	NA	183003051	182867832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
Isoform_37051_12	chr1	-	1468	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-37	9926	0	1	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTCTGCCTTGCT	NA	False	NA	-1	True	AATAAA	-14	NA	183003086	182877755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
Isoform_37052_3	chr1	-	3481	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	463	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	35.3534980233245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078073	183057919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183077928
Isoform_37053_13	chr1	-	3731	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-301	0	-24	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078837	183057915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
Isoform_37054_34	chr1	-	3446	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-16	0	-16	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078552	183057915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
Isoform_37056_8	chr1	-	3442	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	-27	-2	-14	0	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078827	183057915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
Isoform_37057_3	chr1	-	3100	24	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	36.7126480319773	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	NA	False	NA	-2	True	CATAAA	-17	NA	183126909	183107682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
Isoform_3706_653	chr10	+	1217	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2650	0	1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95351006	95378869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_37060_14	chr1	-	3023	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126903	183107681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
Isoform_37063_4	chr1	-	1544	4	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	31512	0	-14019	5prime_fragment	FALSE	canonical	3	46	junction_3	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAATGGCCTAA	4043	False	NA	NA	False	ACTAAA	-13	NA	183150894	183139193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_183140360_183143388_183143476_183146987_183147122_183150737
Isoform_37067_576	chr1	-	1270	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	36	611	2	-1	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCGCTATTACGTTTT	NA	False	NA	-11	True	AATAAA	-30	NA	184578042	184545875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
Isoform_37068_139	chr1	-	1318	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	-8	607	-8	3	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTATTACGTTTTTCTC	NA	False	NA	-7	True	AATAAA	-34	NA	184578086	184545871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
Isoform_37073_3	chr1	-	981	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	142	1912	142	-1912	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTATCTCCCCCATCT	NA	False	NA	-1	True	AATACA	-22	NA	184615273	184606034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_184606625_184614882
Isoform_37076_223	chr1	-	3485	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	11	1975	11	-1132	multi-exon	FALSE	canonical	3	288	junction_20	32.2887284275964	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061582	185018897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_37078_47	chr1	-	3537	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	21	1913	21	-1070	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGTGGATGACGAAG	NA	False	NA	1	True	AATAAA	-35	NA	185061572	185018835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_37082_13	chr1	-	2560	18	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	31	9843	31	469	5prime_fragment	FALSE	canonical	3	288	junction_15	34.0313309744017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTTTTTCAACA	NA	False	NA	NA	False	NA	NA	NA	185061562	185026765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
Isoform_37085_72	chr1	-	1402	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	22	154	0	-154	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTACTGACTTTCAG	NA	False	NA	-16	True	AATAAA	-10	NA	185849485	185820081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
Isoform_37086_12	chr1	-	1264	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	0	-680	0	-122	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTAGTCCCATGATG	NA	False	NA	16	True	AATAAA	-42	NA	185849485	185820049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
Isoform_37087_6	chr1	-	606	2	NNC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	20428	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186461094	186453284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_186453744_186460947
Isoform_37088_384	chr1	-	1178	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	33	110	0	4	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186481522	186453284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
Isoform_3709_47	chr10	+	1503	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2364	0	287	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGTCCTTGCCATG	NA	False	NA	13	True	AATAAA	-24	NA	95351006	95379155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_37091_8	chr1	-	1293	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	30	-2	-3	2	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTATCTTTTCTATTTT	NA	False	NA	-28	True	CATAAA	-8	NA	186481525	186453172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
Isoform_37092_5	chr1	-	3093	4	FSM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1054	junction_3	20.6774165590278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTCTGCTTCCCTGC	NA	False	NA	-15	True	ATTAAA	-13	NA	186481522	186453287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_186453744_186468312_186468512_186469784_186472061_186481360
Isoform_37094_5	chr1	-	3117	2	ISM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	0	15817	0	-15817	5prime_fragment	FALSE	canonical	3	1054	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAACAAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	186481522	186469105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_186472061_186481360
Isoform_37096_78	chr1	-	3704	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	0	2	0	-2	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGTGTCTTCAGTTA	NA	False	NA	-4	True	ATTAAA	-18	NA	188740037	188703293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_37098_13	chr1	-	3767	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-63	2	-62	-2	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGTGTCTTCAGTTA	NA	False	NA	-4	True	ATTAAA	-18	NA	188740100	188703293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_37102_4	chr1	-	2381	17	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	47.2623991667795	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTTGATATTGAATTA	NA	False	NA	NA	False	NA	NA	NA	188740037	188705997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_188706402_188706483_188706669_188708807_188708905_188710693_188710849_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
Isoform_37105_3	chr1	-	4870	12	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	5	16296	5	1823	5prime_fragment	FALSE	canonical	3	128	junction_1	16.4859068287717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAATTGAAAAG	NA	False	NA	11	True	NA	NA	NA	189420278	189389098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
Isoform_37114_11	chr1	-	1625	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654503	189612689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37115_4	chr1	-	1692	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTTGGTTTCTGAAT	NA	False	NA	-10	True	AATAAA	-13	NA	189654577	189612692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_189613064_189614305_189614415_189616020_189616195_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37116_8	chr1	-	1706	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654585	189612690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37117_3	chr1	-	2996	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654577	189612689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37118_6	chr1	-	2909	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGTTTCTGAATGTC	NA	False	NA	-7	True	AATAAA	-16	NA	189654490	189612689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37119_5	chr1	-	1150	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	-25	4703	-25	-149	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGATGGTCTCCTGTG	NA	False	NA	NA	False	AGTAAA	-8	NA	189654585	189617391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37120_6	chr1	-	1061	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	64	4703	-46	-149	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGATGGTCTCCTGTG	NA	False	NA	NA	False	AGTAAA	-8	NA	189654496	189617391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
Isoform_37121_40	chr1	-	3978	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	15	2	-8	-2	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCTTCCTCATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	190643952	190505077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_37122_10	chr1	-	3902	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	11.9782840983518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCCTCATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	190643968	190505076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_37123_4	chr1	-	3196	12	ISM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	-2	25570	-2	-1	5prime_fragment	FALSE	canonical	3	35	junction_4	5.58036700117193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTCATTGTGTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	190643969	190530645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_37124_3	chr1	-	5577	11	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-9	-254	intron_retention	FALSE	canonical	3	35	junction_3	5.54616984954482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATCGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	190643953	190528519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
Isoform_37125_5	chr1	-	4079	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	-40	1	-40	-1	multi-exon	FALSE	canonical	2	14	junction_1	7.45521608765167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATATGTCCTTTAAAA	NA	False	NA	0	True	AATAAA	-19	NA	190758395	190738044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
Isoform_37126_9	chr1	-	1191	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	1	4	0	-1	multi-exon	FALSE	canonical	2	15	junction_3	9.99011857466179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGTATTTTTAAAAAA	NA	False	NA	-8	True	TATAAA	-12	NA	190795101	190778042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
Isoform_37127_8	chr1	-	1209	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	28	5	0	-5	multi-exon	FALSE	canonical	2	9	junction_2	11.4309521329882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAATGATTTGTCTT	NA	False	NA	7	True	TATAAA	-27	NA	190795101	190778027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
Isoform_37128_172	chr1	-	1894	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	88	2	88	-2	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTAGTGTGGCACTGGT	NA	False	NA	-2	True	AATAAA	-21	NA	190915449	190902494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
Isoform_37129_45	chr1	-	1978	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	4	2	4	-2	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTAGTGTGGCACTGGT	NA	False	NA	-2	True	AATAAA	-21	NA	190915533	190902494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
Isoform_3713_34	chr10	+	1508	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-293	2652	-293	-1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCTTTGTACAGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	95350713	95378867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
Isoform_37130_16	chr1	-	654	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	88	0	88	0	multi-exon	FALSE	canonical	3	115	junction_1	10.5303793326209	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTGTATGGTTCTTG	NA	False	NA	0	True	AATAAA	-19	NA	191050303	191038985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
Isoform_37131_14	chr1	-	2618	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	468	2	-254	-2	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTGCTCTTTTGT	NA	False	NA	-6	True	AATAAA	-22	NA	191128770	191084173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
Isoform_37133_130	chr1	-	4084	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	1	127	1	-127	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTAAGATGGCTTGGG	NA	False	NA	-7	True	AATAAA	-23	NA	191307655	191269603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_37134_72	chr1	-	4182	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	32	-2	-1	2	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAGAGTGTGTTAC	NA	False	NA	-4	True	NA	NA	NA	191307624	191269474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
Isoform_37139_8	chr1	-	2255	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	-40	-1	-40	-1	multi-exon	FALSE	canonical	1	2	junction_6	1.02469507659596	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGGGCTCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	191776908	191729166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
Isoform_37140_4	chr1	-	2232	13	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	13.1811629060396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	191822323	191784776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814123_191814238_191814682_191814761_191821732_191821790_191822035
Isoform_37142_40	chr1	-	2139	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	15	-310	-7	107	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	191822344	191784776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_37143_7	chr1	-	2082	11	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	-8	107	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.1449540151586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	191822345	191784776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_37144_4	chr1	-	1990	12	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.2777767390066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	191822321	191784776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_191785456_191786051_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
Isoform_37146_10	chr1	-	2834	12	FSM	ENSMUSG00000037375.17	ENSMUST00000044190.12	2839	12	6	-1	1	1	multi-exon	TRUE	canonical	3	12	junction_1	5.12327374676559	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATGTGTCTTGATACT	NA	False	NA	NA	False	AATAAA	-15	NA	192453525	192195134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
Isoform_37147_40	chr1	-	2645	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	57	2868	-8	483	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGCTTTGCCTGCGTTT	NA	False	NA	0	True	NA	NA	NA	192812523	192789577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
Isoform_37149_3	chr1	-	3194	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	54	2322	-11	1029	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAGAAGCATTATTT	NA	False	NA	NA	False	AAGAAA	-14	NA	192812526	192789031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
Isoform_37150_3	chr1	-	1298	6	FSM	ENSMUSG00000016194.15	ENSMUST00000016338.15	1623	6	267	58	267	-3	multi-exon	FALSE	canonical	0	0	junction_4	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGTAACTATGAATGG	NA	False	NA	NA	False	AATAAA	-25	NA	192924670	192903999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482
Isoform_37151_45	chr1	-	764	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	108	-1	108	1	multi-exon	FALSE	canonical	3	79	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	0	True	AATAAA	-17	NA	192955417	192954467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192955111_192955296
Isoform_37152_36	chr1	-	840	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	32	-1	32	1	multi-exon	FALSE	canonical	3	79	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	False	NA	0	True	AATAAA	-17	NA	192955493	192954467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_192955111_192955296
Isoform_37154_19	chr1	-	1650	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	1	0	1	0	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGTGGTTCATACTT	NA	False	NA	-1	True	AATAAA	-19	NA	194813868	194786097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
Isoform_37156_30	chr1	-	1331	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAGGTGTGTGGTTCA	NA	False	NA	-6	True	AATAAA	-14	NA	194813868	194786102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
Isoform_37165_17	chr1	-	490	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6202	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAATAACCCTTCTTA	NA	False	NA	-6	True	AATAAA	-12	NA	132206195	132196251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
Isoform_37166_10	chr1	-	594	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6208	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACCCTTCTTAATTTCG	NA	False	NA	0	True	AATAAA	-18	NA	132206195	132196245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
Isoform_37167_4	chr1	-	473	2	Antisense	novelGene_ENSMUSG00000073633.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATCATTAA	NA	False	NA	NA	False	NA	NA	NA	84827723	84821719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_84822113_84827643
Isoform_37168_5	chr1	-	593	3	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11465746	11456111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_11456468_11457012_11457110_11465606
Isoform_37169_12	chr1	-	1350	10	NNC	ENSMUSG00000026260.13	novel	675	6	NA	NA	-10	2602	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	411.765845003093	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTTTGGTCATAGTG	NA	False	NA	NA	False	NA	NA	NA	92401499	92377172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_92377484_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
Isoform_37170_9	chr1	-	552	2	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	119371867	119367898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_119368350_119371766
Isoform_37171_4	chr1	-	4056	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	21	3	intron_retention	FALSE	canonical	0	0	junction_1	14.2572331839295	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTAAAATGTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	39517815	39410944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_39411866_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_37172_6	chr1	-	2258	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1961	23198	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	47.932823363073	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACTATACATAAGTTCT	NA	False	NA	-9	True	NA	NA	NA	132206188	132179255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_132181184_132202453_132202560_132202761_132202875_132206077
Isoform_37173_4	chr1	-	1007	4	NNC	ENSMUSG00000037503.13	novel	525	3	NA	NA	-10	10217	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	220.768355220278	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATGGAAGGCTCTAC	NA	False	NA	NA	False	AGTAAA	-23	NA	34882104	34842082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_34842732_34867847_34867929_34875813_34875895_34881908
Isoform_37174_7	chr1	-	1036	6	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-12	51846	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	157.634260235521	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTGGCATAAATTAGC	NA	False	NA	NA	False	AATAAA	-17	NA	179345582	179153253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_179153693_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
Isoform_37175_4	chr1	-	734	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-19	31	multi-exon	FALSE	canonical	2	41	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	86837424	86836483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_86836834_86837040
Isoform_37176_3	chr1	-	2647	13	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	-286	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.581154442087	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCATTTGCTCTTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	191128802	191084174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_191085305_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
Isoform_37177_4	chr1	-	1110	7	NNC	ENSMUSG00000001143.14	novel	689	6	NA	NA	0	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.8180762051719	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTTTATTGTCATT	NA	False	NA	NA	False	TATAAA	-18	NA	36484338	36466557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_36466863_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37179_45	chr1	-	805	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	1	1088	1	142	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGGTCTTTTTTTTTA	1650	False	NA	1	True	NA	NA	NA	4855932	4844516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
Isoform_3718_6	chr10	+	691	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	-20	-1	-20	1	multi-exon	FALSE	canonical	3	30	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAAGTAATCTAGGT	3200	False	NA	NA	False	NA	NA	NA	95567068	95575216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_95567365_95570676_95570791_95574935
Isoform_37182_1029	chr1	-	1006	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	30	3167	1	-1	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTGCTCAGGTCTTTT	1650	False	NA	-11	True	ATTAAA	-21	NA	4855932	4846600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
Isoform_37190_5	chr1	-	5171	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	3	4575	3	-4575	multi-exon	FALSE	canonical	3	96	junction_2	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTCTTCCTGTTCAT	NA	False	NA	NA	False	AATACA	-16	NA	9818604	9793421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_9795576_9807190_9807278_9815674
Isoform_37191_3	chr1	-	1703	3	ISM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	0	0	0	intron_retention	FALSE	canonical	3	144	junction_1	272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_10012375_10012547_10012617_10012834
Isoform_37192_31	chr1	-	400	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	1	0	-1	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
Isoform_37194_5	chr1	-	1929	2	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	64	0	0	intron_retention	FALSE	canonical	3	538	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014343	10012247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_10012381_10012547
Isoform_37195_24	chr1	-	1708	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-895	3	0	-1	multi-exon	FALSE	canonical	3	538	junction_1	75	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012381_10012547_10012617_10012834
Isoform_37196_13	chr1	-	453	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	-45	65	-45	1	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTGGGCAGTAATTT	NA	False	NA	-14	True	AATAAA	-13	NA	10014388	10012248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_37197_97	chr1	-	406	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	67	0	-1	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_37198_4	chr1	-	473	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_3	129.892263049036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGACTTTTTGTCAAT	NA	False	NA	1	True	AATAAA	-15	NA	10014343	10012183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
Isoform_37201_14	chr1	-	1291	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	313.343653036022	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTTCTGTGGTT	NA	False	NA	-16	True	AATAAA	-11	NA	10108170	10095058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
Isoform_37202_324	chr1	-	1285	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	182	231	0	11	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108170	10095056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_37203_18	chr1	-	1514	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	-47	231	-6	11	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108399	10095056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_37204_8	chr1	-	1521	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	177	0	-5	0	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGACTGGCCTGAGT	NA	False	NA	-1	True	AGTAAA	-40	NA	10108175	10094825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
Isoform_37206_27	chr1	-	1254	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	5	11	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTCCTTCTGTGGTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	10108388	10095056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
Isoform_37207_3	chr1	-	3840	20	FSM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	-416	0	-416	0	multi-exon	FALSE	canonical	3	88	junction_17	20.9399616632847	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATGTAATGTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	10303311	10243299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
Isoform_37210_3	chr1	-	1818	4	ISM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-89	72563	-89	36707	5prime_fragment	FALSE	canonical	2	5	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAAATTTTCT	NA	False	NA	NA	False	AAAAAG	-17	NA	13062963	13009335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_13009425_13014203_13014337_13059803_13061188_13062751
Isoform_37213_8	chr1	-	2621	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1471	-275	1471	275	3prime_fragment	FALSE	canonical	3	343	junction_5	37.0135110466435	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCGTAATTGGATGGC	NA	False	NA	-6	True	AATAAA	-15	NA	13195916	13183405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
Isoform_37214_4	chr1	-	2579	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1265	-27	1265	27	3prime_fragment	FALSE	canonical	3	343	junction_5	37.0135110466435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGGTTCCTCTTTT	NA	False	NA	-31	True	AATAAA	-37	NA	13196122	13183653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
Isoform_37215_5	chr1	-	2608	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	1058	30	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13196329	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
Isoform_37216_5	chr1	-	2685	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	981	30	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13196406	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
Isoform_37217_4	chr1	-	2641	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-834	30	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	143.424871893096	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13198221	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13198120
Isoform_37220_81	chr1	-	2669	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-75	-30	-75	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13197462	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37221_38	chr1	-	2749	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-155	-30	-155	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13197542	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37222_6	chr1	-	3426	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-832	-30	-832	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13198219	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37223_8	chr1	-	2824	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-230	-30	-230	30	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13197617	13183650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37225_5	chr1	-	2911	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-75	-272	-75	272	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCTTCGTAATTGGAT	NA	False	NA	-9	True	AATAAA	-12	NA	13197462	13183408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37227_4	chr1	-	2994	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-155	-275	-155	275	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCGTAATTGGATGGC	NA	False	NA	-6	True	AATAAA	-15	NA	13197542	13183405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37228_3	chr1	-	3556	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-964	-28	-964	28	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGGTTCCTCTTTTC	NA	False	NA	-30	True	AATAAA	-38	NA	13198351	13183652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
Isoform_37229_3	chr1	-	2573	2	NIC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-113	-9994	intron_retention	FALSE	canonical	3	189	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTGTCTCTAAATAA	NA	False	NA	NA	False	AATAAA	-1	NA	13197500	13193674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_13196081_13197333
Isoform_37231_190	chr1	-	2827	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	29	82	-6	-82	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	9685	False	NA	-7	True	AATAAA	-16	NA	13660105	13635003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
Isoform_37232_43	chr1	-	2887	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	48	3	13	-3	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGAGTCTATTTTTTG	9704	False	NA	-12	True	ATTAAA	-12	NA	13660086	13634924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
Isoform_37236_108	chr1	-	1898	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	2570	26	-2570	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTTATGTGTATG	NA	False	NA	28	True	AATATA	-43	NA	13730744	13696123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_37239_89	chr1	-	2936	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	27	1531	27	-1531	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	13730743	13695084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_3724_7	chr10	+	2832	19	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-59	18727	0	165	5prime_fragment	FALSE	canonical	3	30	junction_7	6.63720341226653	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAACTGTCAAAAGT	2720	False	NA	NA	False	NA	NA	NA	95776552	95862653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418
Isoform_37241_435	chr1	-	1040	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	3428	26	3237	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACCCTTGATACTTGT	NA	False	NA	-11	True	ATTAAA	-14	NA	13730744	13696981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
Isoform_3725_423	chr10	+	1815	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	3	3183	3	958	multi-exon	FALSE	canonical	3	461	junction_1	0	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTCTTGTCATGATT	NA	False	NA	NA	False	AATAAA	-24	NA	96452870	96455488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_96453335_96454137
Isoform_37261_6	chr1	-	4055	18	FSM	ENSMUSG00000025932.15	ENSMUST00000027066.13	4347	18	288	4	-76	0	multi-exon	FALSE	canonical	3	31	junction_13	8.24998689314257	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTCCTTGGATGTC	NA	False	NA	-15	True	AATAAA	-17	NA	14380136	14239181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
Isoform_37263_7	chr1	-	1801	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-67	7	-65	-7	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAACATGCATTGTAAA	NA	False	NA	-3	True	AATAAA	-14	NA	14826281	14823576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_14824550_14825453
Isoform_37264_20	chr1	-	1740	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-2	3	0	-3	multi-exon	FALSE	canonical	3	23	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATTGTAAAAGTT	NA	False	NA	1	True	AATAAA	-18	NA	14826216	14823572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_14824550_14825453
Isoform_37275_12007	chr1	-	884	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	266	13	6	-2	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	12007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174620	16171531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
Isoform_37276_1129	chr1	-	926	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	224	13	-36	-2	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174662	16171531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
Isoform_37286_3	chr1	-	3205	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-16	718	-3	-6	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACCCACTGCTCATT	NA	False	NA	NA	False	AATAAA	-10	NA	16589487	16414427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
Isoform_37289_4	chr1	-	3122	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-64	-94	2	1	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGCTCATTTATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	16589528	16414420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_3729_10	chr10	+	1581	6	NIC	ENSMUSG00000019943.11	novel	1249	4	NA	NA	-50	2730	combination_of_known_junctions	FALSE	canonical	3	240	junction_3	8.61626369141521	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGTAGGTGTGGCG	NA	False	NA	NA	False	NA	NA	NA	98750217	98827056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923
Isoform_37290_5	chr1	-	3019	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-62	7	4	1	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGACTTTGATTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	16589526	16414521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
Isoform_37291_4	chr1	-	1550	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGTCTGTTCTTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	16689498	16611012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_37292_10	chr1	-	1545	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-357	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAGTGTGGACATTT	NA	False	NA	NA	False	AATACA	-26	NA	16689513	16640362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
Isoform_37294_8	chr1	-	1966	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	212	3	7	-3	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTGTTTCTATGACA	NA	False	NA	NA	False	TATAAA	-18	NA	16689501	16640008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_37295_45	chr1	-	1597	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	230	354	0	-354	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGTGGACATTTTTA	NA	False	NA	NA	False	AATACA	-29	NA	16689483	16640359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_37297_6	chr1	-	2107	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	194	-120	-11	120	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACGGTATGTAAACCCA	NA	False	NA	NA	False	AATAAA	-19	NA	16689519	16639885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_37298_4	chr1	-	2336	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	201	-356	-4	356	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGTGGACACTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	16689512	16639649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
Isoform_373_522	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
Isoform_37305_19	chr1	-	980	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-6	1040	-6	2	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727114	16712988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
Isoform_37306_165	chr1	-	477	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	17	1520	11	-54	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727091	16713468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
Isoform_37309_35	chr1	-	560	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-24	105	0	-56	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCTGTAGTTCAGTTA	NA	False	NA	-4	True	AATAAA	-37	NA	16727266	16713470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
Isoform_37313_27	chr1	-	1995	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-1035	0	-7	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTACGATCAGCACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	16727266	16711955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_37314_320	chr1	-	482	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	478	0	-54	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727266	16713468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_37315_73	chr1	-	962	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-2	0	2	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727266	16712988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
Isoform_37323_765	chr1	-	2983	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	52	-4	0	4	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTATGTGTGTGAG	NA	False	NA	-8	True	AATACA	-13	NA	20890484	20873187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_37324_2159	chr1	-	2937	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	53	41	1	-3	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	2159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCATGCTTTGTGCTT	NA	False	NA	-15	True	AGTAAA	-21	NA	20890483	20873232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
Isoform_37334_48	chr1	-	1416	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	4	5072	4	2942	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGAGCCGCCAGAT	NA	False	NA	-2	True	AATAAA	-21	NA	21149449	21071594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
Isoform_37335_5	chr1	-	1548	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-24	3320	-24	-20	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23422280	23408824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
Isoform_37336_11	chr1	-	2348	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-61	2	-61	-2	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTTATTTGTGGGTT	NA	False	NA	-4	True	ATTAAA	-15	NA	23961459	23884707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
Isoform_37339_44	chr1	-	637	4	ISM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-64	30752	-64	-27582	5prime_fragment	FALSE	canonical	3	425	junction_3	31.3723161756065	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAAGTAAAACCTTCAT	NA	False	NA	NA	False	GATAAA	-19	NA	23961462	23915457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_23915531_23916789_23916876_23930940_23931075_23961118
Isoform_3734_4	chr10	+	4990	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	240	252	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAACCTTTAGTCTTTT	NA	False	NA	5	True	ATTAAA	-14	NA	98750507	98859937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
Isoform_37341_130	chr1	-	653	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	24	6	-2	-6	multi-exon	FALSE	canonical	3	315	junction_1	0.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	24044713	24035025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24035442_24042237_24042388_24044626
Isoform_37342_3	chr1	-	1494	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	26	-837	0	837	multi-exon	FALSE	canonical	3	315	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTCTAGTACATGTTT	NA	False	NA	NA	False	NA	NA	NA	24044711	24034182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24035442_24042237_24042388_24044626
Isoform_37343_5	chr1	-	5016	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-313	2864	0	1002	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAGGAAAGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	30912975	30844283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_37344_9	chr1	-	2891	6	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-294	18841	19	-122	5prime_fragment	FALSE	canonical	3	122	junction_4	10.4230513766363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATCTACAGCTCTTGC	NA	False	NA	NA	False	AAAAAG	-14	NA	30912956	30860260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_37346_15	chr1	-	2866	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-295	27085	18	7	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTATTTTTCTTTTGAA	NA	False	NA	-5	True	AATAAA	-20	NA	30912957	30868504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
Isoform_37350_3	chr1	-	2595	3	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	17	4	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGGCTATTTTTCTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	30912958	30868507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_30870641_30876185_30876348_30912658
Isoform_37351_3	chr1	-	2116	3	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	17	-475	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATATATGTGGACTC	NA	False	NA	NA	False	AAAAAG	-29	NA	30912958	30868986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_30870641_30876185_30876348_30912658
Isoform_37352_3	chr1	-	1348	2	NIC	ENSMUSG00000048874.16	novel	941	3	NA	NA	18	694	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTGGCAGCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	30912957	30869591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_30870641_30912658
Isoform_37354_227	chr1	-	2846	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	0	5	0	-5	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTTTCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	30988838	30980665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
Isoform_37358_725	chr1	-	2850	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-2	1281	0	-4	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTTCCTTTTCCTAG	NA	False	NA	NA	False	AATAAA	-20	NA	30988838	30980664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
Isoform_37363_12	chr1	-	4125	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-2	6	0	-6	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTCTGAGTGTTTCTG	NA	False	NA	-7	True	ATTAAA	-12	NA	30988838	30979389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
Isoform_37364_4	chr1	-	1114	7	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	226	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.66580310591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCAAGTGGGAG	8803	False	NA	-4	True	AATAAA	-16	NA	33660997	33492892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33660914
Isoform_37365_36	chr1	-	1157	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	255	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	107.409572788139	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	8832	False	NA	0	True	AATAAA	-20	NA	33660968	33492888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660914
Isoform_37366_12	chr1	-	1159	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	111.583043112312	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	8832	False	NA	-2	True	AATAAA	-18	NA	33660968	33492890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33660910
Isoform_37368_44	chr1	-	1377	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14686	-2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_9	88.3062851670253	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCAAGTGGGAG	2980	False	NA	-4	True	AATAAA	-16	NA	33677091	33492892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33677047
Isoform_37369_6	chr1	-	1418	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-13291	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	102.591723488764	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTGCAAGTGGGAGT	4375	False	NA	-3	True	AATAAA	-17	NA	33675696	33492891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33675612
Isoform_37370_4	chr1	-	1622	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14686	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	101.707763399863	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCAAGTGGGAG	2980	False	NA	-4	True	AATAAA	-16	NA	33677091	33492892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33676802
Isoform_37371_273	chr1	-	1947	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	28	0	28	0	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	NA	False	NA	-2	True	AATAAA	-18	NA	33708848	33492890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
Isoform_37372_31	chr1	-	1787	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	27	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2968437932844	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAGCATTGGCCATTA	NA	False	NA	-6	True	NA	NA	NA	33796849	33784565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_33785226_33785270_33786098_33787297_33787408_33796659
Isoform_37374_24	chr1	-	3799	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-35	194	8	-194	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTCTGTGTTATGTG	NA	False	NA	-1	True	AATAAA	-27	NA	33853643	33800819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_37375_46	chr1	-	3959	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-7	6	-7	-6	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAACTAAGAGGAAATTT	NA	False	NA	-8	True	AATAAA	-11	NA	33853615	33800631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_37378_18	chr1	-	3315	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-7	8095	-7	7903	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853615	33808720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_37380_3	chr1	-	3739	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-47	7711	-4	-7711	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTCTAAGATTGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	33853655	33808336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
Isoform_37383_7	chr1	-	2423	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	57	7	9	-7	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATGCACTTTCTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	33946840	33891139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
Isoform_37384_5	chr1	-	2487	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	-7	7	-7	-7	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATGCACTTTCTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	33946904	33891139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
Isoform_37385_4	chr1	-	1066	3	ISM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	62	25717	14	-4011	5prime_fragment	FALSE	canonical	3	39	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAACCAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	33946835	33916849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_33917519_33922521_33922730_33946646
Isoform_37386_128	chr1	-	1386	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	319	0	319	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7523	False	NA	1	True	AATAAA	-23	NA	34478434	34475750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
Isoform_37388_3	chr1	-	4995	8	FSM	ENSMUSG00000037503.13	ENSMUST00000167518.8	5058	8	56	7	-9	0	multi-exon	FALSE	canonical	0	0	junction_4	208.281990952415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882075	34852306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
Isoform_37389_55	chr1	-	4978	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	52	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882094	34852306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
Isoform_37395_9	chr1	-	5017	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	-67	-4009	3	0	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882112	34852306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
Isoform_37397_3	chr1	-	1996	3	NNC	ENSMUSG00000103708.2	novel	654	3	NA	NA	5415	1278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTAGGTGTCTCACTTG	NA	False	NA	NA	False	NA	NA	NA	36044656	36040787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_36042488_36042894_36043073_36044538
Isoform_37398_18	chr1	-	5577	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-3	3459	-3	0	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283389	36182566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_37399_27	chr1	-	5534	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGCTTTTTCTTCT	NA	False	NA	-4	True	NA	NA	NA	36283369	36182565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_37400_3	chr1	-	2563	19	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	39	39245	39	-667	5prime_fragment	FALSE	canonical	3	253	junction_2	55.4345348525717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATACACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	36283347	36218352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
Isoform_37403_4	chr1	-	4584	20	ISM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	1140	9	0	-9	3prime_fragment	FALSE	canonical	3	87	junction_19	29.8025822004935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGCGTTGCTTCAG	NA	False	NA	-16	True	AATAAA	-12	NA	36407122	36374819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
Isoform_37404_15	chr1	-	2167	2	FSM	ENSMUSG00000010453.13	ENSMUST00000185614.2	2177	2	24	-14	22	14	multi-exon	TRUE	canonical	3	130	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36408214	36404977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36407116_36408185
Isoform_37405_19	chr1	-	1091	8	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	59.6068753738756	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGAGTTTCTACTCCCT	NA	False	NA	0	True	AATAAA	-17	NA	36484338	36458950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37407_173	chr1	-	2246	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1118	0	3	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCAGTGGCCTTC	NA	False	NA	0	True	CATAAA	-24	NA	36484338	36462263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37408_7	chr1	-	3045	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	319	0	-319	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATCCTGCCCCAGCT	NA	False	NA	NA	False	ATTAAA	-23	NA	36484338	36461464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37409_4	chr1	-	3361	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	17	0	3	0	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTCTTGTCAGAAGTG	NA	False	NA	NA	False	AATAGA	-13	NA	36484335	36461145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_3741_6	chr10	+	2913	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	27	-78	-19	-8	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATCAATGTCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	98942924	99033928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
Isoform_37410_7	chr1	-	2207	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	65.1654096299939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGAGTTCTGGCTCAGT	NA	False	NA	-7	True	CATAAA	-17	NA	36484335	36462270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
Isoform_37411_4	chr1	-	2161	7	FSM	ENSMUSG00000001143.14	ENSMUST00000001171.13	2174	7	14	-1	0	1	multi-exon	FALSE	canonical	2	10	junction_4	67.569717082926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTGGCTCAGTGGCCT	NA	False	NA	-2	True	CATAAA	-22	NA	36484338	36462265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
Isoform_37413_10	chr1	-	2578	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTGGCTCAGTGGCCT	NA	False	NA	-2	True	CATAAA	-22	NA	36484338	36462265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37414_7	chr1	-	1422	6	ISM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	17	5417	3	910	5prime_fragment	FALSE	canonical	3	153	junction_4	20.8480214888608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATATAGTTTTATTG	NA	False	NA	NA	False	TATAAA	-13	NA	36484335	36466562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
Isoform_37415_10	chr1	-	2682	4	NIC	ENSMUSG00000079610.10	novel	2646	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	27.1947707391615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7026	False	NA	NA	False	NA	NA	NA	36586300	36576586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36578616_36580904_36581144_36581842_36581947_36585990
Isoform_37416_10	chr1	-	853	4	FSM	ENSMUSG00000079610.10	ENSMUST00000194894.4	664	4	30	-219	18	219	multi-exon	FALSE	canonical	3	25	junction_1	19.6015872373189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACATGGGCAAAGATAA	7044	False	NA	-10	True	AATAAA	-17	NA	36586282	36578221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36578616_36580904_36581144_36581842_36581947_36586166
Isoform_37417_3	chr1	-	2468	5	Fusion	ENSMUSG00000079610.10_ENSMUSG00000109510.2	novel	664	4	NA	NA	16	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	27.0601182554696	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7042	False	NA	NA	False	NA	NA	NA	36586284	36576588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_-_36578071_36578090_36578616_36580904_36581144_36581842_36581947_36586166
Isoform_37418_20	chr1	-	2644	4	FSM	ENSMUSG00000079610.10	ENSMUST00000207843.2	2646	4	3	-1	3	1	multi-exon	FALSE	canonical	3	9	junction_3	29.9369708257569	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7029	False	NA	NA	False	NA	NA	NA	36586297	36576586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36585990
Isoform_37421_12	chr1	-	2477	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	220	-588	6	1	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7020	False	NA	NA	False	NA	NA	NA	36586306	36576586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
Isoform_37422_33	chr1	-	820	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	244	1045	18	221	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGGGCAAAGATAAAT	7044	False	NA	-8	True	AATAAA	-19	NA	36586282	36578219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
Isoform_37424_101	chr1	-	2236	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	44	6	44	-2	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722220	36601778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_37425_9	chr1	-	2166	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	36	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	52.7337849106805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722228	36601778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36602102_36603410_36603564_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_37426_4	chr1	-	2088	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	53.5654220357669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722225	36601778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36602102_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_37427_33	chr1	-	1611	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	44	4	44	-4	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-23	NA	36722220	36639060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_37428_4	chr1	-	1693	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	36	-70	36	70	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCGGCAGTGCCTGC	NA	False	NA	NA	False	AGTAAA	-21	NA	36722228	36638986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
Isoform_3743_19	chr10	+	2855	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	85	-78	18	-8	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATCAATGTCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	98942982	99033928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
Isoform_37430_882	chr1	-	2127	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	35	1086	-26	-1086	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749054	36738280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_37431_187	chr1	-	3213	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	35	0	-26	0	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749054	36737194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_37432_13	chr1	-	2199	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	-40	1089	-40	-1089	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCGGTGTGTGGCTCTG	NA	False	NA	-20	True	TATAAA	-25	NA	36749129	36738283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_37435_25	chr1	-	2281	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-26	-1089	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCGGTGTGTGGCTCTG	NA	False	NA	-20	True	TATAAA	-25	NA	36749054	36738283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_37437_25	chr1	-	2455	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-26	-1086	intron_retention	FALSE	canonical	3	484	junction_1	34.797404716444	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749054	36738280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
Isoform_37439_3	chr1	-	6629	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-95	12	-95	-9	multi-exon	TRUE	canonical	3	231	junction_29	35.4925256216009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7126	False	NA	-10	True	AATAAA	-13	NA	36978703	36831283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
Isoform_37440_8	chr1	-	3274	26	NIC	ENSMUSG00000026116.12	novel	591	6	NA	NA	-106	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	61.8143543200121	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATTTTCTTTTCATTA	7115	False	NA	NA	False	AATAAA	-20	NA	36978714	36853224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_36853499_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
Isoform_37441_50	chr1	-	3799	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	57	7	-46	-7	multi-exon	FALSE	canonical	3	395	junction_2	27.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATCTTTGTTCTGTTTC	6329	False	NA	-10	True	NA	NA	NA	37469127	37456171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_37459709_37467422_37467507_37468949
Isoform_37444_5	chr1	-	4376	10	NIC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	-1	True	AATAAA	-15	NA	37758905	37650757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_37651481_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
Isoform_37445_4	chr1	-	3600	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-6	-733	0	-299	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTTGTGTGGA	NA	False	NA	-6	True	NA	NA	NA	37904160	37871782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
Isoform_37446_82	chr1	-	1201	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	29	1	25	-1	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGATCCACTCACCT	NA	False	NA	-1	True	AATAAA	-18	NA	37929463	37917969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
Isoform_37448_6	chr1	-	945	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195032.6	1444	5	691	-192	-267	-55	multi-exon	FALSE	canonical	3	37	junction_4	367.038400579558	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCTATTTTTGTGAT	NA	False	NA	-11	True	TTTAAA	-17	NA	38036006	38026531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38035973
Isoform_37450_255	chr1	-	1062	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	110	2209	19	-2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTCACATGTCTGTTT	NA	False	NA	-7	True	NA	NA	NA	38036286	38026478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_37451_12	chr1	-	1391	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	74	1916	2	289	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTCCATTGGCTGCTC	NA	False	NA	-3	True	ATTAAA	-22	NA	38036322	38026185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_37453_7	chr1	-	1338	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	650	-289	0	289	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTCCATTGGCTGCTC	NA	False	NA	-3	True	ATTAAA	-22	NA	38036324	38026185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
Isoform_37455_42	chr1	-	1039	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	656	4	6	-2	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTCACATGTCTGTTT	NA	False	NA	-7	True	NA	NA	NA	38036318	38026478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
Isoform_37457_15	chr1	-	1757	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	110	3937	19	1132	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGGCACCATAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	38036286	38028206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_3746_5	chr10	+	2793	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	3	0	-3	multi-exon	TRUE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCGTGTTTTTATTTTT	NA	False	NA	6	True	AATAAA	-16	NA	99099092	99103347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_99099954_99100405_99100844_99101853
Isoform_37460_5	chr1	-	2537	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	110	3157	19	-703	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTCTGTTTATTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	38036286	38027426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
Isoform_37463_4	chr1	-	504	4	ISM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	2	46122	2	1	5prime_fragment	FALSE	canonical	3	163	junction_3	17.2497987105808	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAAAGAATTAAAGGGG	NA	False	NA	NA	False	AAAACA	-35	NA	38168741	38137988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_38138103_38146648_38146776_38147484_38147549_38168542
Isoform_37464_15	chr1	-	3115	7	FSM	ENSMUSG00000026080.15	ENSMUST00000027249.13	2975	7	-149	9	2	-1	multi-exon	FALSE	canonical	2	9	junction_6	2.75378527364305	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAAGTGTATCTGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	38937240	38902956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
Isoform_37466_3	chr1	-	3115	7	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1	junction_6	5.07991688470939	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAAGTGTATCTGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	38937248	38902956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936978
Isoform_37467_28	chr1	-	4070	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	11	370	11	5	multi-exon	TRUE	canonical	3	38	junction_12	7.9882184715386	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAATGTCATTTT	NA	False	NA	-1	True	AATAAA	-20	NA	39517825	39410942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_37469_4	chr1	-	2374	9	ISM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-44	15351	11	2531	5prime_fragment	FALSE	canonical	3	38	junction_1	6.14283118765281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39517825	39427747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
Isoform_3747_5	chr10	+	2724	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	72	0	72	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGTTTTTATTTTTAAG	NA	False	NA	9	True	AATAAA	-19	NA	99099164	99103350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_99099954_99100405_99100844_99101853
Isoform_37471_23	chr1	-	2490	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	-2	4	-2	-4	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTCTATGTAACAA	4715	False	NA	-7	True	AATAAA	-13	NA	39616488	39590380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
Isoform_37476_7	chr1	-	5091	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	245	49	-21	-49	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	NA	False	NA	-8	True	ATTAAA	-16	NA	43131644	43086428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_37479_5	chr1	-	2597	11	ISM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	245	4265	-21	3223	5prime_fragment	FALSE	canonical	3	38	junction_10	7.81280999384984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCCAGTTTTTATTT	NA	False	NA	NA	False	TTTAAA	-14	NA	43131644	43090644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
Isoform_3748_5	chr10	+	570	6	ISM	ENSMUSG00000019971.11	ENSMUST00000220346.2	8211	54	51	80907	51	-7447	5prime_fragment	FALSE	canonical	3	24	junction_1	5.2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGGAAAAAGAATTGGATA	NA	False	NA	NA	False	AAAAAG	-17	NA	100323470	100328610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509
Isoform_37480_4	chr1	-	1254	2	FSM	ENSMUSG00000070939.10	ENSMUST00000187525.2	1795	2	-19	560	-19	-319	multi-exon	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTAGGGCTCATTCTTG	NA	False	NA	NA	False	NA	NA	NA	43131642	43113960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_43115113_43131540
Isoform_37481_5	chr1	-	1773	3	ISM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-68	27599	-53	-317	5prime_fragment	FALSE	canonical	3	11	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGGGCTCATTCTTGGT	7715	False	NA	NA	False	NA	NA	NA	43137850	43113958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_43115113_43136011_43136210_43137429
Isoform_37483_77	chr1	-	2021	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	36	2563	-2	-17	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGGTTTTGAGCTACA	NA	False	NA	-19	True	AATAAA	-17	NA	43866924	43788688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
Isoform_37484_22	chr1	-	1711	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	9	2900	9	-354	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGGTACTTATAAATG	NA	False	NA	NA	False	ATTAAA	-30	NA	43866951	43789025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
Isoform_37486_8	chr1	-	2041	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	5	-17	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGGTTTTGAGCTACA	NA	False	NA	-19	True	AATAAA	-17	NA	43866929	43788688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
Isoform_37487_3	chr1	-	895	6	NIC	ENSMUSG00000026049.12	novel	935	7	NA	NA	-3	15	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	156.042814637522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATAAAGTATACCTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	44141586	44126004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141487
Isoform_37488_35	chr1	-	1207	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTTGTTTTACTC	NA	False	NA	-1	True	ATTAAA	-19	NA	44141543	44125773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
Isoform_37489_5	chr1	-	1035	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTCACTCAGCATTGT	NA	False	NA	NA	False	AATAAA	-28	NA	44141591	44125993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
Isoform_3749_4	chr10	+	629	6	ISM	ENSMUSG00000019971.11	ENSMUST00000220346.2	8211	54	-2	80901	-2	-7441	5prime_fragment	FALSE	canonical	3	24	junction_1	5.2	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAATTGGATAAAGAAA	NA	False	NA	NA	False	AAAAAG	-23	NA	100323417	100328616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509
Isoform_37490_3	chr1	-	1316	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTTGTTTTACTC	NA	False	NA	-1	True	ATTAAA	-19	NA	44141652	44125773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
Isoform_37491_47	chr1	-	1192	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	15	-247	-3	-1	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTTGTTTTACTC	NA	False	NA	-1	True	ATTAAA	-19	NA	44141586	44125773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
Isoform_37494_82	chr1	-	1999	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	20	340	20	-1	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGTTTTGTTACAGT	NA	False	NA	-6	True	AATAAA	-16	NA	44157948	44146045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_37496_4	chr1	-	2358	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	1	0	1	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGGCCTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	44157967	44145705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_37499_5	chr1	-	2119	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-35	1	20	-1	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGTTTTGTTACAGT	NA	False	NA	-6	True	AATAAA	-16	NA	44157948	44146045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
Isoform_3750_4	chr10	+	1524	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-40	-1786	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTATCATTTATAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	103203603	103231233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_37501_43	chr1	-	4970	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	528	0	528	0	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	456	False	NA	NA	False	AATAAA	-16	NA	46892678	46846703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
Isoform_37504_3	chr1	-	5108	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	517	-7	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	105.535823301853	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGTGTGGTGTGTTTT	445	False	NA	NA	False	AATAAA	-9	NA	46892689	46846710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
Isoform_37506_39	chr1	-	2837	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	1	0	-1	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATAGGAGTAACAGAAC	NA	False	NA	-2	True	AATAAA	-31	NA	51517558	51508647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
Isoform_37508_4	chr1	-	4815	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-43	-5	-30	0	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGGATTACAACTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	51955130	51789147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_37509_26	chr1	-	3745	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-4	1026	-4	-1026	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATCAGAATAGTTCAT	NA	False	NA	-10	True	ATTAAA	-21	NA	51955091	51790178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_3751_7	chr10	+	1189	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	-24	32	-24	-32	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACAAGTATTCTGGAG	NA	False	NA	NA	False	AATAAA	-13	NA	104030293	104032351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_104030363_104031231
Isoform_37510_24	chr1	-	5010	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-20	-223	-7	-6	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTCTCCGAAGTCTT	NA	False	NA	10	True	AAAAAG	-21	NA	51955107	51788929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_37514_5	chr1	-	2480	16	ISM	ENSMUSG00000018417.15	ENSMUST00000114537.9	4618	29	-23	28866	-23	867	5prime_fragment	FALSE	canonical	3	256	junction_6	28.2437013627227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	51955123	51818006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
Isoform_37518_30	chr1	-	1401	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-342	2582	164	277	multi-exon	FALSE	canonical	3	220	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	338	False	NA	NA	False	TTTAAA	-40	NA	52992345	52964064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_52964894_52991773
Isoform_37531_6	chr1	-	873	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	110	2582	110	277	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	284	False	NA	NA	False	TTTAAA	-40	NA	52992399	52964064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_52964894_52992355
Isoform_37532_6	chr1	-	910	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-272	277	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	TTTAAA	-40	NA	52992781	52964064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_52964894_52992700
Isoform_37533_3	chr1	-	536	8	NIC	ENSMUSG00000060715.10	novel	726	10	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	26	junction_7	12.1504178142657	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACTAGAACAGAATGGAA	NA	False	NA	NA	False	AATAAA	-22	NA	53226767	53197741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_53197948_53202384_53202405_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53226712
Isoform_37534_3	chr1	-	3200	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	39.2778563569857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTTTTCACGTCCA	6057	False	NA	NA	False	AATAAA	-15	NA	53336172	53228348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
Isoform_37535_28	chr1	-	3046	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	3	5	0	-5	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTGTTTTCACGTC	6055	False	NA	NA	False	AATAAA	-13	NA	53336174	53228350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
Isoform_37538_394	chr1	-	2368	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	49	25	49	3	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTGTAGTAGTTTCA	NA	False	NA	-27	True	AATAAA	-16	NA	53391862	53383800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
Isoform_37543_20	chr1	-	2654	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	43	596	-24	-596	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATATTCTTTCCTTGTGT	729	False	NA	-1	True	GATAAA	-26	NA	53824340	53795260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
Isoform_37544_18	chr1	-	2707	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	-13	599	-13	-599	multi-exon	FALSE	canonical	3	57	junction_1	6.25316246521123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGATATTCTTTCCTTG	673	False	NA	-4	True	GATAAA	-23	NA	53824396	53795263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
Isoform_37547_12	chr1	-	4593	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-11	0	-11	0	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6689	False	NA	-6	True	AATAAA	-19	NA	54478141	54435162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
Isoform_37548_98	chr1	-	2997	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	10	1575	10	-1575	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACAATATTGCCTTCT	6710	False	NA	-5	True	AATAAA	-18	NA	54478120	54436737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
Isoform_37560_87	chr1	-	4242	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	98	1855	-10	-1851	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTGTTTTTTGAA	NA	False	NA	-1	True	AATAAA	-21	NA	55066542	55026182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_37561_18	chr1	-	4338	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	0	1857	0	-1853	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066640	55026184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
Isoform_37599_1592	chr1	-	2243	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	179	1	179	-1	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTTACCCTTT	4634	False	NA	-7	True	AATAAA	-15	NA	55127004	55116994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
Isoform_376_1283	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
Isoform_37606_57	chr1	-	2402	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	32	2	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4268	False	NA	-4	True	AATAAA	-18	NA	55127370	55116991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
Isoform_37610_59	chr1	-	2250	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-36	1	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4419	False	NA	-5	True	AATAAA	-17	NA	55127219	55116992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
Isoform_3763_10	chr10	+	1385	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	427	1	-10	-1	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGTGTAATAGAAGCGT	NA	False	NA	NA	False	AATAAA	-17	NA	105677354	105683693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_37632_3	chr1	-	599	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-21	3376	-21	-3376	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGCTTTTGAAGAC	NA	False	NA	NA	False	NA	NA	NA	57416724	57401756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_57401923_57414406_57414679_57416563
Isoform_37634_3	chr1	-	1213	9	FSM	ENSMUSG00000048495.17	ENSMUST00000160837.8	766	9	-27	-420	1	-6	multi-exon	FALSE	canonical	3	10	junction_4	49.931828526502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57445629	57427404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432828_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_37635_12	chr1	-	1234	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	606	7	-24	-4	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTATTGGTGGAGTG	NA	False	NA	-22	True	AATAAA	-39	NA	57445654	57427402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
Isoform_37636_17	chr1	-	1187	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	203	8	0	-8	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAAGTCTATTGGTGG	NA	False	NA	-26	True	AATAAA	-35	NA	57445630	57427406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
Isoform_37638_11	chr1	-	3027	7	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.1859749331515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACTTTTCTGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	58009197	57994415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58008565
Isoform_37639_32	chr1	-	2426	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	77	9	1	-4	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACTTTTCTGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	58009210	57994415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_37640_4	chr1	-	2576	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	71	-135	-5	-12	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCTCAGAAGGTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	58009216	57994271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_37641_5	chr1	-	2512	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	-10	10	-10	-5	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009297	57994416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
Isoform_37642_33	chr1	-	1752	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	44	0	44	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463181	58451158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
Isoform_37643_19	chr1	-	1661	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	44	0	44	0	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463181	58451158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
Isoform_37644_3	chr1	-	3051	11	FSM	ENSMUSG00000026034.18	ENSMUST00000156931.8	4865	11	0	1814	0	-3	multi-exon	FALSE	canonical	3	126	junction_10	34.9097407609968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAAGGTCTATAGCTTG	NA	False	NA	-15	True	AATAAA	-17	NA	58463225	58451161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
Isoform_37645_20	chr1	-	1066	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	-39	6	9	-3	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATGTGAGTGTCCTTT	NA	False	NA	-5	True	AATAGA	-22	NA	58484632	58470158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
Isoform_37647_6	chr1	-	878	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	20	-2	16	-1	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484625	58470153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
Isoform_37648_12	chr1	-	821	7	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	60.3869467131212	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484645	58470152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
Isoform_37650_11	chr1	-	2192	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	223	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTCTCTGGAGACTT	NA	False	NA	-16	True	GATAAA	-14	NA	58544115	58503139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_37651_7	chr1	-	2949	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-2	-424	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTCTGCACTTT	NA	False	NA	1	True	AATAAA	-19	NA	58544086	58502353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
Isoform_37653_19	chr1	-	2170	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	180	1211	-4	222	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTCTCTGGAGACT	NA	False	NA	-17	True	GATAAA	-13	NA	58544088	58503140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_37654_18	chr1	-	2954	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	182	425	-2	-425	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544086	58502354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_37655_14	chr1	-	2988	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	146	427	-8	-427	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCTGGTCTGCAC	NA	False	NA	-2	True	AATAAA	-16	NA	58544122	58502356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_37658_4	chr1	-	3408	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	149	4	-5	-4	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTTTGTAGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	58544119	58501933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_37659_13	chr1	-	2229	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	124	1208	-30	225	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTCTGGAGACTTCT	NA	False	NA	-14	True	GATAAA	-16	NA	58544144	58503137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
Isoform_37664_7	chr1	-	4208	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	26	4451	0	-236	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58625456	58566415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
Isoform_37666_5	chr1	-	4082	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	76	2031	75	1024	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGCTTGCTTTGAAA	1623	False	NA	NA	False	ATTAAA	-19	NA	59012513	58941638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
Isoform_37669_4	chr1	-	1808	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	21	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGTTTTTCCTTTTTA	4361	False	NA	0	True	AATAAA	-34	NA	59158944	59139738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
Isoform_3767_23	chr10	+	999	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	401	413	-36	-413	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTCTGAGCTCACAGT	NA	False	NA	4	True	AATATA	-10	NA	105677328	105683281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
Isoform_37670_22	chr1	-	1468	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	12	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAATAAAAT	4352	False	NA	NA	False	NA	NA	NA	59158953	59140087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
Isoform_37671_7	chr1	-	1442	11	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	6	-18	combination_of_known_splicesites	FALSE	canonical	3	28	junction_10	51.7934358775318	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAATAAAAT	4346	False	NA	NA	False	NA	NA	NA	59158959	59140087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
Isoform_37672_3	chr1	-	968	7	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	18	-225	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	73.2380062232415	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAGTACTTTTCATA	4358	False	NA	NA	False	ATTAAA	-15	NA	59158947	59147578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
Isoform_37673_16	chr1	-	6319	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	19	4	14	-4	multi-exon	TRUE	canonical	2	89	junction_12	16.3968238094348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTTCTATGACTGT	NA	False	NA	-2	True	AATAAA	-16	NA	59276371	59202088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_37674_18	chr1	-	2951	13	FSM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	9	17	4	-17	multi-exon	FALSE	canonical	2	94	junction_2	9.94847838728226	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	59276381	59230784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_37675_9	chr1	-	2166	8	ISM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	9	14667	4	9375	5prime_fragment	FALSE	canonical	3	104	junction_1	7.16567783084826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCTTCTTTT	NA	False	NA	NA	False	AATGAA	-32	NA	59276381	59245434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
Isoform_37678_388	chr1	+	709	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	63	197	-3	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929620	37937419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
Isoform_37679_99	chr1	+	628	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	8	26	-3	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929620	37937419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
Isoform_37692_7	chr1	+	1301	5	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	-5	30209	-5	-23628	5prime_fragment	FALSE	canonical	3	579	junction_4	48.9948976935354	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTATACTGGTAGTG	1403	False	NA	NA	False	NA	NA	NA	38037204	38060893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674
Isoform_37696_3	chr1	+	641	3	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	52253	3558	5629	0	3prime_fragment	FALSE	canonical	3	704	junction_1	11	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	NA	False	NA	37	True	ATTAAA	-24	NA	38089343	38091102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_38089407_38090203_38090366_38090686
Isoform_377_802	SIRV5	+	2028	16	FSM	SIRV5A	SIRV505	2029	16	1	0	1	0	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
Isoform_37703_92	chr1	+	2544	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	330	junction_4	508.177450294338	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACATGTTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	4928034	4968126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959682_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_37709_297	chr1	+	2547	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-2	2	-2	-2	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACATGTTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	4928034	4968126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_37714_14	chr1	+	2665	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-120	2	-120	-2	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACATGTTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	4927916	4968126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
Isoform_37723_20	chr1	+	1729	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2186	-1	-47	1	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGTAAGATTTATTT	NA	False	NA	4	True	AATACA	-14	NA	39026874	39036320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
Isoform_37730_536	chr1	+	439	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	70	540	-17	5	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTTTCCTTTCTGT	NA	False	NA	31	True	AATAAA	-20	NA	39406992	39410452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_37731_534	chr1	+	510	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	-2	541	-2	4	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGTTTTCCTTTCTG	NA	False	NA	30	True	AATAAA	-19	NA	39406920	39410451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_37738_283	chr1	+	486	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	3	-2	3	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407012	39410447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_37743_77	chr1	+	627	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	3	0	3	0	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGGTTTGGTTTTCCT	NA	False	NA	25	True	AATAAA	-14	NA	39407012	39410446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
Isoform_37750_111	chr1	+	3209	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-44	-3	-44	3	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAATATTAGA	NA	False	NA	NA	False	NA	NA	NA	39574838	39585957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_37752_328	chr1	+	1733	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-44	1473	-44	-1	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTTTCCCATGGATGA	NA	False	NA	26	True	AGTAAA	-14	NA	39574838	39584481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_37754_17	chr1	+	1786	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-119	1495	-119	-23	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTAAAATTTCCTTTTT	NA	False	NA	4	True	TATAAA	-15	NA	39574763	39584459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_37756_14	chr1	+	1582	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-57	0	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	27	True	AGTAAA	-15	NA	39574825	39584482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
Isoform_37759_3	chr1	+	1234	8	ISM	ENSMUSG00000026073.14	ENSMUST00000027243.13	1419	9	17724	30	16437	-18	3prime_fragment	FALSE	canonical	1	2	junction_5	1.35526185435788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAATAAAGGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	40141581	40164361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_40141698_40144423_40144683_40151114_40151296_40154183_40154359_40157114_40157178_40160068_40160205_40162281_40162425_40164200
Isoform_37760_282	chr1	+	1917	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	49	83	-3	27	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153351	5232669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_37762_6	chr1	+	2678	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	52	-681	0	681	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTATTTCTTTTAG	NA	False	NA	NA	False	AATAAA	-15	NA	5153354	5233433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_37764_21	chr1	+	1863	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-25	-27	-3	27	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153351	5232669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_37765_4	chr1	+	2376	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-7	17	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGTTTTGAAATGAT	NA	False	NA	115	True	AATAAA	-34	NA	5153339	5232769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_37766_4	chr1	+	1857	14	NIC	ENSMUSG00000033793.13	novel	970	5	NA	NA	372	27	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTTAAATTTTGC	NA	False	NA	15	True	ATTAAA	-15	NA	5153758	5232669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
Isoform_3777_4	chr10	+	2156	11	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-80	26024	-80	-2034	5prime_fragment	FALSE	canonical	3	203	junction_7	15.2973853975116	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	107997973	108087188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774
Isoform_37770_5	chr1	+	1495	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	265.216892373016	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890424	42944843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42927014_42927123_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
Isoform_37771_253	chr1	+	1387	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	32	-1	-11	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890424	42944843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
Isoform_37772_86	chr1	+	3406	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	45	7	45	-7	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATCTTGAGCAGGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	43137914	43155100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
Isoform_37777_5	chr1	+	4679	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	-2	-28	-2	-1	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	3302	False	NA	7	True	AATAAA	-17	NA	43973164	44042159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_37778_8	chr1	+	3995	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	22	632	-4	3	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTGGCGTGTGGCT	3326	False	NA	7	True	ATTAAA	-20	NA	43973188	44041499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_3778_114	chr10	+	2440	16	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-71	16439	-71	7436	5prime_fragment	FALSE	canonical	3	168	junction_12	22.3352238005851	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAGAGAAAGAAAAAG	NA	False	NA	NA	False	AAAACA	-39	NA	107997982	108096773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
Isoform_37783_16	chr1	+	4637	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-6	0	2	0	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3306	False	NA	8	True	AATAAA	-18	NA	43973168	44042160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_37784_40	chr1	+	3969	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	0	662	0	2	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3312	False	NA	6	True	ATTAAA	-19	NA	43973174	44041498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
Isoform_37786_14	chr1	+	3289	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTATGAATTTTAATGTC	NA	False	NA	20	True	AATAAA	-20	NA	44158156	44183676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_37787_11	chr1	+	3317	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.9479728143057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44158147	44183675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_44158356_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_37789_10	chr1	+	3230	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	86	254	75	6	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTATGAATTTTAATGTC	NA	False	NA	20	True	AATAAA	-20	NA	44159213	44183676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
Isoform_3779_9	chr10	+	2784	16	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-415	16439	-415	7436	5prime_fragment	TRUE	canonical	3	168	junction_12	22.3352238005851	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAGAGAAAGAAAAAG	NA	False	NA	NA	False	AAAACA	-39	NA	107997638	108096773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
Isoform_37791_10	chr1	+	3646	15	FSM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	67	194	5	-194	multi-exon	FALSE	canonical	0	0	junction_3	30.0296622066399	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAACCTAATTTA	NA	False	NA	NA	False	ACTAAA	-16	NA	44187073	44220226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
Isoform_37797_5	chr1	+	4003	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	24	26730	6	889	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAGATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6284892	6320142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
Isoform_37798_3	chr1	+	2978	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	149	11	-33	1	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATTAAACTGTATGAT	NA	False	NA	NA	False	AATAAA	-9	NA	44590819	44835987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
Isoform_37806_435	chr1	+	2608	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	342	3	1	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAAAGCCTTGTGTT	NA	False	NA	5	True	TATAAA	-21	NA	45834667	45862776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
Isoform_37807_69	chr1	+	2669	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	281	3	-2	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAAAGCCTTGTGTT	NA	False	NA	5	True	TATAAA	-21	NA	45834606	45862776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
Isoform_37811_81	chr1	+	925	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGTTTATATGAAAC	NA	False	NA	14	True	AATAAA	-16	NA	134890315	134901899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
Isoform_37812_24	chr1	+	553	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3186	-2	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCATGCCTCTTGTGTC	NA	False	NA	9	True	AATAAA	-15	NA	171049436	171053940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
Isoform_37813_3	chr1	+	651	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3277	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGTGTCTTTGGGT	NA	False	NA	16	True	AATAAA	-22	NA	171049345	171053947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
Isoform_37814_29	chr1	+	942	2	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAAATGCA	2301	False	NA	NA	False	NA	NA	NA	181856073	181857397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181856461_181856842
Isoform_37815_15	chr1	+	2120	3	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189576863	189584174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_189576951_189578530_189578610_189582220
Isoform_37816_5	chr1	+	2849	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	166	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTTCTGTGAGTTATT	NA	False	NA	NA	False	NA	NA	NA	189576863	189602431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_37819_3	chr1	+	2313	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTAGTAGTATTTTA	NA	False	NA	13	True	AATAAA	-24	NA	183170324	183191017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_3782_13	chr10	+	2296	15	NIC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	-95	7436	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	54.0060937604758	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAGAGAAAGAAAAAG	NA	False	NA	NA	False	AAAACA	-39	NA	107997958	108096773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696
Isoform_37820_3	chr1	+	1498	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	-828	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCTACAGTGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	183170314	183190192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_37821_3	chr1	+	518	3	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAACAATAACCAGGT	NA	False	NA	NA	False	NA	NA	NA	119233328	119247231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_+_119233438_119234108_119234328_119247041
Isoform_37822_3	chr1	+	1061	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3293	191	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGGAGTATTCGAACAT	NA	False	NA	13	True	AATAAA	-19	NA	21327037	21335436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_37823_5	chr1	+	996	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3357	190	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGGAGTATTCGAACA	NA	False	NA	12	True	AATAAA	-18	NA	21327101	21335435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_37826_8	chr1	+	2468	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	45	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	124.599258451291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	6	True	AATAAA	-17	NA	63769846	63791625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_63770096_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
Isoform_37827_5	chr1	+	1936	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	331	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	9.30653373968708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36810403	36821897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_36810653_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
Isoform_37828_4	chr1	+	2324	6	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	21662	-2	intron_retention	FALSE	canonical	2	8	junction_1	77.9717897704035	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTCTTTGTTCACCC	NA	False	NA	7	True	AATAAA	-16	NA	165979697	165994076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_165980032_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_37829_3	chr1	+	4047	5	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	98.9709553353912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGTCTTTGTCCA	NA	False	NA	16	True	AATAAA	-17	NA	152969254	152995010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_152969358_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_37830_6	chr1	+	563	2	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCAGTTGAACCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	181061459	181062292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181061702_181061971
Isoform_37831_14	chr1	+	2601	24	FSM	ENSMUSG00000062939.12	ENSMUST00000027277.7	2982	24	381	0	-2	0	multi-exon	TRUE	canonical	3	8	junction_15	7.16402480577569	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTCTGGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	52047782	52146343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122020_52122039_52122136_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
Isoform_37832_4	chr1	+	2691	3	Antisense	novelGene_ENSMUSG00000102279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGGTTGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	36024633	36033719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_+_36024686_36026666_36026768_36031181
Isoform_37833_4	chr1	+	3547	18	NNC	ENSMUSG00000037995.16	novel	636	6	NA	NA	-994	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.67635293929406	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	87	False	NA	4	True	AATAAA	-16	NA	172317659	172326444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_172317728_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_37834_4	chr1	+	331	3	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	8.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	525	False	NA	NA	False	NA	NA	NA	161705393	161708912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_161705610_161708770_161708785_161708811
Isoform_37835_3	chr1	+	1068	7	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	-5264	199	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	30.7064958744707	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCGAACATTGTCATTC	NA	False	NA	21	True	AATAAA	-27	NA	21318480	21335444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_21318604_21319974_21320083_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_37837_3	chr1	+	3679	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	36	-1090	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350061	139375831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_37838_3	chr1	+	1048	3	NNC	ENSMUSG00000039384.9	novel	2792	4	NA	NA	5165	-758	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCAGTTTCCCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	183771742	183807075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_183771798_183801048_183801421_183806454
Isoform_37839_3	chr1	+	863	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3536	194	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.8644324286721	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTATTCGAACATTGT	NA	False	NA	16	True	AATAAA	-22	NA	21327280	21335439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_21327312_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_3784_97	chr10	+	2413	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-78	-590	-78	590	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5520	False	NA	13	True	AATAAA	-15	NA	108167903	108250691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_37840_4	chr1	+	2695	23	FSM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	50	89	0	-8	multi-exon	FALSE	canonical	3	19	junction_12	6.78598458418965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAATGAAACAAAGTT	3298	False	NA	NA	False	NA	NA	NA	52158648	52194482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
Isoform_37841_4	chr1	+	3335	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	-15	1831	0	474	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAAGGGGGCCAGCTTT	3248	False	NA	NA	False	AATAAA	-16	NA	52158598	52199193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_37842_3	chr1	+	4213	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	-5	943	-5	-85	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTTATGAGTTGGTT	3258	False	NA	NA	False	TATAAA	-14	NA	52158608	52200081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_37843_4	chr1	+	3241	25	NNC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	-9	479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	8.8857524848615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCCAGCTTTCTTAA	3348	False	NA	NA	False	AATAAA	-21	NA	52158698	52199198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186451_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
Isoform_37844_11	chr1	+	3380	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	16	0	16	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669877	52691078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
Isoform_37846_11	chr1	+	3331	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-25	-1283	-15	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669880	52691078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
Isoform_37847_5	chr1	+	2641	4	NIC	ENSMUSG00000043015.16	novel	3247	8	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	18.263503375737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669876	52691078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_52670011_52676523_52676640_52687908_52688086_52688864
Isoform_37848_52	chr1	+	1710	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-4	124	-2	-119	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTGTGTTGATGCCTTA	NA	False	NA	7	True	AATAAA	-17	NA	52884200	52960021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
Isoform_37849_35	chr1	+	1824	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	16	70	16	-70	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTAAGTTTTCCA	NA	False	NA	23	True	AATAAA	-17	NA	53336269	53349398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
Isoform_3785_457	chr10	+	2316	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	19	-590	19	590	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5617	False	NA	13	True	AATAAA	-15	NA	108168000	108250691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_37851_3	chr1	+	4461	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	-6	-450	-3	450	multi-exon	FALSE	canonical	3	159	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53352809	53358267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_53353018_53354014
Isoform_37852_6	chr1	+	1829	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	37	2	-2	-2	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGGCCTTGTGTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	53352819	53365500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
Isoform_37854_5	chr1	+	1648	8	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	46.6559268496949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53352815	53365320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_53353018_53354014_53354259_53357065_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
Isoform_37855_3	chr1	+	3214	3	ISM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	84	5595	-15	-4846	5prime_fragment	FALSE	canonical	3	186	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	3643	False	NA	NA	False	AATAAA	-15	NA	55092012	55106266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_55092150_55100433_55100584_55103339
Isoform_37856_66	chr1	+	1665	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	68	0	-31	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3627	False	NA	22	True	AATAAA	-28	NA	55091996	55111861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
Isoform_3786_40	chr10	+	2445	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-110	-590	-110	590	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5488	False	NA	13	True	AATAAA	-15	NA	108167871	108250691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_37860_1010	chr1	+	594	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	185	-5	3	5	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTTGGTAATTTAAGG	NA	False	NA	18	True	AATAAA	-19	NA	55127475	55130471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_37861_1407	chr1	+	525	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	181	68	-1	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127471	55130398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_37862_106	chr1	+	797	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	-16	-7	-16	7	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTAATTTAAGGTC	NA	False	NA	20	True	AATAAA	-21	NA	55127274	55130473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_37864_122	chr1	+	703	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	3	68	3	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127293	55130398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
Isoform_37873_11	chr1	+	2732	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	57	51	1	-50	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCCTCCCTGTAGTAT	NA	False	NA	24	True	AATAAA	-24	NA	55170446	55194007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
Isoform_37877_6	chr1	+	1019	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	-4	1825	-4	75	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTGCTAAACAATCATT	NA	False	NA	11	True	AATAAA	-19	NA	55170385	55192233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
Isoform_37878_26	chr1	+	2977	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	27	4	7	-4	multi-exon	FALSE	canonical	3	44	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTATTTGGATGTGT	NA	False	NA	4	True	ATTAAA	-15	NA	57416805	57424578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_57417106_57421901
Isoform_37879_92	chr1	+	1067	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	425	2048	-6	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445911	57455064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_37881_12	chr1	+	1279	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	213	2048	213	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445699	57455064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
Isoform_37882_10	chr1	+	2498	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	2	1429	2	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814021	57986124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
Isoform_37883_8	chr1	+	2503	14	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	8.58855713199065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814013	57986124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
Isoform_37886_3	chr1	+	2693	7	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	20	8872	20	-8871	5prime_fragment	FALSE	canonical	3	186	junction_3	14.4539498638492	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGAAAAACAGAAATAATTT	5159	False	NA	NA	False	AAGAAA	-18	NA	58035149	58056186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
Isoform_37891_10	chr1	+	4313	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	42	251	-8	-251	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTCTGTGCTGAG	NA	False	NA	8	True	ATTAAA	-18	NA	58152336	58239606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
Isoform_37898_833	chr1	+	2832	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	244	800	10	-800	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	901	False	NA	23	True	AATAAA	-18	NA	58432300	58445712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_37899_269	chr1	+	3639	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	238	-1	4	1	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	895	False	NA	14	True	NA	NA	NA	58432294	58446513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
Isoform_379_356	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
Isoform_37915_6	chr1	+	3480	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	372	-83	-105	83	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTAGCCTGGCTTCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	58484681	58502698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_37917_72	chr1	+	2139	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	441	1189	-36	1	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGACACACTGTATT	NA	False	NA	14	True	NA	NA	NA	58484750	58501426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_37919_126	chr1	+	1396	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	441	1932	-36	140	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTTGTTTCTTGG	NA	False	NA	16	True	ATTAAA	-16	NA	58484750	58500683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_37921_7	chr1	+	1723	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	114	1932	-2	140	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTTGTTTCTTGG	NA	False	NA	16	True	ATTAAA	-16	NA	58484423	58500683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
Isoform_37923_3	chr1	+	3140	2	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	64	50528	54	-37802	5prime_fragment	FALSE	canonical	3	138	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	7159207	7193324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_7159441_7190417
Isoform_37924_3	chr1	+	723	2	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	64	52945	54	-40219	5prime_fragment	FALSE	canonical	3	138	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTTGTAACTATGTCT	NA	False	NA	NA	False	TATAAA	-36	NA	7159207	7190907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_7159441_7190417
Isoform_37927_3	chr1	+	4278	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	68	886	58	83	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159211	7242966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
Isoform_37929_234	chr1	+	502	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	218	43	218	-43	multi-exon	FALSE	canonical	3	979	junction_1	90.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTGTAACTCTTAAA	NA	False	NA	9	True	AATAAA	-14	NA	58625760	58635080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58625830_58630248_58630409_58634807
Isoform_37930_12	chr1	+	747	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	-26	42	-26	-42	multi-exon	FALSE	canonical	3	979	junction_1	90.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTGTAACTCTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	58625516	58635081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58625830_58630248_58630409_58634807
Isoform_37932_40	chr1	+	2281	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	78	601	78	-8	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAACATCTCTTTTAT	NA	False	NA	7	True	AATAAA	-9	NA	59012758	59034273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
Isoform_37933_38	chr1	+	2315	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	44	601	44	-8	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAACATCTCTTTTAT	NA	False	NA	7	True	AATAAA	-9	NA	59012724	59034273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
Isoform_37934_6	chr1	+	2101	11	FSM	ENSMUSG00000026027.14	ENSMUST00000123301.8	2070	11	86	-117	86	-8	multi-exon	FALSE	canonical	1	4	junction_7	23.192455669894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAACATCTCTTTTAT	NA	False	NA	7	True	AATAAA	-9	NA	59012766	59034273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031809_59031915_59032051_59032297_59032719_59032763_59033451
Isoform_37940_4	chr1	+	2138	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724116	59750666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_37947_29	chr1	+	1786	14	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-53	8392	-15	-627	5prime_fragment	FALSE	canonical	3	1434	junction_3	175.9835589416	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGATTTTGGTGTTGT	NA	False	NA	17	True	NA	NA	NA	59724114	59749811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653
Isoform_37949_40	chr1	+	1993	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-21	7535	3	-1	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724146	59750668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
Isoform_37950_4	chr1	+	1879	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	125	1235	18	-166	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCTGTTTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	9618297	9646960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_37951_14	chr1	+	1838	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	18	166	18	-166	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCTGTTTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	9618297	9646960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
Isoform_37953_4	chr1	+	3396	12	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	144	10978	144	-10978	5prime_fragment	FALSE	canonical	0	0	junction_11	3.62041959122543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTCAACAAAAGAACCC	NA	False	NA	NA	False	NA	NA	NA	59802702	59907195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
Isoform_37954_4	chr1	+	709	5	ISM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	6	138142	6	14288	5prime_fragment	FALSE	canonical	3	9	junction_2	5.58457697592217	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGTGAATACATTCCT	NA	False	NA	3	True	NA	NA	NA	60219763	60239345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263
Isoform_37955_93	chr1	+	2226	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	-3	0	-3	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382478	60427219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
Isoform_37956_7	chr1	+	4165	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-150	-2344	34	-16	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60448811	60518661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
Isoform_37957_17	chr1	+	4089	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	23	1656	23	-16	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60448800	60518661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_37958_5	chr1	+	5749	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	17	2	17	-2	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	13	True	AATAAA	-15	NA	60448794	60520315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_37959_7	chr1	+	4282	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	29	1457	29	183	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTCTCCTACAGTATT	NA	False	NA	3	True	AATAAA	-13	NA	60448806	60518860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_37961_6	chr1	+	4161	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-46	1653	-46	-13	multi-exon	TRUE	canonical	3	110	junction_7	24.0559244262198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	60448731	60518664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_37962_4	chr1	+	4132	9	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-23	-16	intron_retention	FALSE	canonical	3	27	junction_5	45.7295036054405	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60448754	60518661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
Isoform_37963_22	chr1	+	826	6	NIC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	1264.85610248755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63216290	63218808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_63216451_63216881_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_37965_1552	chr1	+	795	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	307	837	1	-7	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63216290	63218808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_37967_87	chr1	+	1092	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	10	837	10	-7	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACCCTTGGCTCTTC	NA	False	NA	23	True	AATAAA	-8	NA	63215993	63218808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
Isoform_3797_138	chr10	+	888	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	387	109	-14	-1	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCTTTCAGAGGAGCT	NA	False	NA	30	True	AATAAA	-31	NA	110756036	110775374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_37979_5	chr1	+	891	2	FSM	ENSMUSG00000086730.3	ENSMUST00000141027.2	462	2	260	-689	-135	336	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAACAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	63239731	63247462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63239834_63246673
Isoform_3798_4	chr10	+	1010	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	349	25	-52	-25	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGACG	NA	False	NA	114	True	NA	NA	NA	110755998	110775458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_37980_6	chr1	+	1053	6	Fusion	ENSMUSG00000027520.17_ENSMUSG00000086730.3	novel	462	2	NA	NA	-135	8173	multi-exon	FALSE	canonical	3	22	junction_2	8.44748483277715	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAACTAAGTATAAA	NA	False	NA	NA	False	ACTAAA	-7	NA	63239731	63342354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_+_63239834_63246673_63246774_63317089_63317143_63319925_63320037_63334074_63334206_63341798
Isoform_37981_4	chr1	+	1101	5	NIC	ENSMUSG00000027520.17	novel	12523	6	NA	NA	-42	8173	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13.8834433769148	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAACTAAGTATAAA	9129	False	NA	NA	False	ACTAAA	-7	NA	63312381	63342354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_63312632_63317089_63317143_63319925_63320037_63334074_63334206_63341798
Isoform_37982_7	chr1	+	3075	26	FSM	ENSMUSG00000025964.16	ENSMUST00000114107.3	6110	26	-330	3365	-10	-1	multi-exon	FALSE	canonical	2	8	junction_25	13.3899066464259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAATCCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	63485039	63632070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
Isoform_37983_4	chr1	+	3081	26	FSM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	-21	3366	-17	-2	multi-exon	TRUE	canonical	2	14	junction_24	11.498591218058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAATCCTTTTTTT	NA	False	NA	8	True	ATTAAA	-13	NA	63485032	63632069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
Isoform_37985_3	chr1	+	2934	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-280	1	-4	-1	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAATCCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	63485089	63632070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
Isoform_37986_3	chr1	+	2236	19	NNC	ENSMUSG00000025964.16	novel	3496	22	NA	NA	5	-5977	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	13.9518572594352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCTTAATAAGTATTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	63485058	63600092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63599895
Isoform_37987_422	chr1	+	2282	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	15	2189	-12	1	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	6	True	AATAAA	-17	NA	63769787	63791625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
Isoform_37989_8	chr1	+	3252	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-328	-1	-166	1	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCGAGTGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	64730175	64764800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
Isoform_3799_3	chr10	+	1077	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	180	127	180	-19	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTACCACCTCTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	110755829	110775356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
Isoform_37991_3	chr1	+	2007	8	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	-7	9245	3	610	5prime_fragment	FALSE	canonical	3	68	junction_7	18.3492200801838	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGATGGAGTCAGGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	65225844	65256031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092
Isoform_37993_3	chr1	+	3626	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	55	-1	6	1	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGGACTATTTCATGC	9869	False	NA	NA	False	ATTAAA	-15	NA	9918551	9971069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_37996_14	chr1	+	2642	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	50	988	1	2	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGTGAATGTGTGTC	9864	False	NA	NA	False	AATAAA	-13	NA	9918546	9970080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_37997_5	chr1	+	3339	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	49	292	0	-219	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGATTTTTGTTGTT	9863	False	NA	NA	False	ATTAAA	-41	NA	9918545	9970776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_37998_5	chr1	+	3386	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	-1	295	-1	-222	multi-exon	TRUE	canonical	3	97	junction_4	18.6899036915657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTAGATTTTTGTT	9813	False	NA	NA	False	ATTAAA	-38	NA	9918495	9970773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_38_142	ERCC-00042	+	1004	1	FSM	ERCC-00042A	DQ516783	1007	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AAAACA	-4	NA	2	1006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00042_+_0_1000
Isoform_38001_6	chr1	+	2747	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-19	0	-19	0	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTGTGAATGTGTG	9920	False	NA	NA	False	AATAAA	-11	NA	9918602	9970078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_38002_4	chr1	+	3733	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-14	-991	-14	1	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGGACTATTTCATGC	9925	False	NA	NA	False	ATTAAA	-15	NA	9918607	9971069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
Isoform_38004_3	chr1	+	2350	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-38	-293	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTGTAAGTATTGAA	NA	False	NA	17	True	NA	NA	NA	66740027	66758671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_38005_24	chr1	+	2385	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	11	296	11	-296	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAGTTTGTAAGTATT	NA	False	NA	14	True	NA	NA	NA	66740000	66758668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
Isoform_38016_6	chr1	+	2515	15	FSM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	0	38	0	-38	multi-exon	FALSE	canonical	2	3	junction_12	9.43857694220254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAGGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	9978862	10011141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
Isoform_38017_4	chr1	+	2462	14	NIC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	-4	-35	intron_retention	TRUE	canonical	1	3	junction_3	10.2131137420325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGAAAAATTACC	NA	False	NA	NA	False	NA	NA	NA	9978858	10011144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
Isoform_3802_4	chr10	+	877	6	FSM	ENSMUSG00000020189.16	ENSMUST00000220139.2	2460	6	-50	1633	0	-1633	multi-exon	FALSE	canonical	3	53	junction_5	12.3450394896088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTATAGTTATTTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	111000612	111099120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040
Isoform_38020_1580	chr1	+	2554	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	63	228	0	-228	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTGTGGTTACTTTT	NA	False	NA	13	True	AATAAA	-13	NA	71596371	71618562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_38021_58	chr1	+	2803	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	43	-1	14	1	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTGTGCTGGCTGAT	NA	False	NA	16	True	AATAAA	-16	NA	71596351	71618791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_38022_74	chr1	+	2618	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	0	227	0	-227	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596308	71618563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
Isoform_3803_15	chr10	+	2733	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	10	1	10	1	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCATGTAAGTTAATTG	NA	False	NA	NA	False	AATAAA	-19	NA	111134549	111137587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111134769_111135073
Isoform_38038_13	chr1	+	2225	19	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	7	11183	7	-11183	5prime_fragment	FALSE	canonical	3	464	junction_5	74.141110869663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCGAGAGCCAATGCCCT	329	False	NA	NA	False	NA	NA	NA	72346592	72422928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860
Isoform_38039_221	chr1	+	2512	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	38	-1	38	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	360	False	NA	23	True	TATAAA	-29	NA	72346623	72434112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
Isoform_38040_471	chr1	+	2444	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	106	-1	106	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	428	False	NA	23	True	TATAAA	-29	NA	72346691	72434112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
Isoform_38045_180	chr1	+	3034	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	22	3	22	-3	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTATTCCGTTTGT	NA	False	NA	6	True	AATAAA	-13	NA	72622431	72672290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
Isoform_38049_3935	chr1	+	363	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	195	0	1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	3935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTTTTTGCCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	72750448	72752777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_38050_112	chr1	+	557	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	1	0	-1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTACATAGCTTGGTT	NA	False	NA	18	True	AATAAA	-16	NA	72750448	72752971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_38051_149	chr1	+	407	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-44	195	-44	1	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTTTTTGCCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	72750404	72752777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_38052_250	chr1	+	418	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	140	0	56	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTCGAAAGATG	NA	False	NA	33	True	ATTAAA	-20	NA	72750448	72752832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
Isoform_38061_7648	chr1	+	1308	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-11	10	-11	-3	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	7648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAAGTGTGTGTCT	1279	False	NA	8	True	ATTAAA	-8	NA	72863650	72891623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
Isoform_38063_243	chr1	+	1351	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-54	10	-54	-3	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAAGTGTGTGTCT	1236	False	NA	8	True	ATTAAA	-8	NA	72863607	72891623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
Isoform_38079_327	chr1	+	1401	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	38	0	-15	0	multi-exon	FALSE	canonical	3	1389	junction_1	306.215936881149	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7866	False	NA	14	True	AATAAA	-19	NA	74275693	74307368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_3808_22	chr10	+	1446	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-85	4	-27	-4	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATTTTTTTTTTTTAT	NA	False	NA	0	True	AATAAA	-17	NA	111309056	111330866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
Isoform_38082_78	chr1	+	1230	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	-11	220	-11	1	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTCCA	7817	False	NA	19	True	NA	NA	NA	74275644	74307148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_38085_66	chr1	+	1600	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	27	-223	-6	1	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAATTTGTTGATTTTT	7875	False	NA	15	True	AATAAA	-20	NA	74275702	74307369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
Isoform_38092_632	chr1	+	610	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	128	2	3	-2	multi-exon	FALSE	canonical	3	1381	junction_1	89	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGCCAGGTTGAATTT	NA	False	NA	4	True	AATAAA	-22	NA	74324216	74326611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74324297_74325000_74325170_74326250
Isoform_38093_9	chr1	+	682	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	53	5	53	-5	multi-exon	FALSE	canonical	3	1381	junction_1	89	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGAGGCCAGGTTGAA	NA	False	NA	1	True	AATAAA	-19	NA	74324141	74326608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74324297_74325000_74325170_74326250
Isoform_38095_31	chr1	+	2929	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	13	-5	3	3	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAGCTCTCAATGGC	NA	False	NA	8	True	NA	NA	NA	74324216	74392848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
Isoform_38096_28	chr1	+	2844	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	12	3	12	-1	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGGTCTGAGCTCTC	9375	False	NA	2	True	NA	NA	NA	74371780	74392842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
Isoform_38098_3	chr1	+	2295	15	FSM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	20	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_1	14.5525087254426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4991	False	NA	NA	False	NA	NA	NA	74414381	74425221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74414481_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_38099_3	chr1	+	2089	14	NNC	ENSMUSG00000026177.12	novel	604	4	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.6190278859903	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAG	6393	False	NA	NA	False	NA	NA	NA	74415783	74425211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_74415821_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_3810_45	chr10	+	2073	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	42	-765	3	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309144	111332745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_38100_3	chr1	+	2244	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1397	11	-57	0	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCTTAAAGA	6368	False	NA	NA	False	NA	NA	NA	74415758	74425210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_38101_4	chr1	+	2184	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1459	9	5	1	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTTAAAGAGT	6430	False	NA	NA	False	NA	NA	NA	74415820	74425212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_38102_11	chr1	+	1135	5	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	8446	9	49	1	3prime_fragment	FALSE	canonical	3	29	junction_1	7.87400787401181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTTAAAGAGT	4370	False	NA	NA	False	NA	NA	NA	74422807	74425212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
Isoform_38104_24	chr1	+	2416	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	167	293	-119	-290	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCGCCTCTGTGGTTTT	3477	False	NA	12	True	ACTAAA	-21	NA	74430834	74436151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_38106_17	chr1	+	2678	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-95	293	-95	-290	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCGCCTCTGTGGTTTT	3215	False	NA	12	True	ACTAAA	-21	NA	74430572	74436151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_38107_18	chr1	+	2700	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	169	7	-117	-4	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3479	False	NA	NA	False	AATAAA	-10	NA	74430836	74436437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_3811_12	chr10	+	3334	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	42	-2026	3	-5	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTGGTGATATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	111309144	111334006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_38111_11	chr1	+	2891	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-23	8	-23	-5	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACGGTGCCCCCAC	3287	False	NA	NA	False	AATAAA	-9	NA	74430644	74436436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_38112_4	chr1	+	2946	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-77	7	-77	-4	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3233	False	NA	NA	False	AATAAA	-10	NA	74430590	74436437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_38114_4	chr1	+	2544	7	NIC	ENSMUSG00000026176.14	novel	393	4	NA	NA	-43	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	7.90393713425292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACGGTGCCCCCACC	3920	False	NA	NA	False	AATAAA	-10	NA	74431277	74436437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_74431409_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
Isoform_38117_5	chr1	+	2500	20	ISM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	1	23834	1	-3797	5prime_fragment	FALSE	canonical	2	35	junction_1	31.9066331817889	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAGAAAGAGGAGG	NA	False	NA	NA	False	AATGAA	-42	NA	10108442	10183159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100
Isoform_38119_7	chr1	+	2480	20	NIC	ENSMUSG00000056763.17	novel	2535	8	NA	NA	0	-3797	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	24.8042753887778	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAGAAAGAGGAGG	NA	False	NA	NA	False	AATGAA	-42	NA	10109997	10183159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100
Isoform_3812_45	chr10	+	2176	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-59	-767	-40	2	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTGTCTCGGTTTGTA	NA	False	NA	25	True	AATAAA	-27	NA	111309043	111332747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_38120_11	chr1	+	3017	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	856	False	NA	30	True	AATAAA	-15	NA	74545212	74569993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_38122_865	chr1	+	2999	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	270	-1	268	1	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTTTAAATT	1130	False	NA	39	True	AATAAA	-24	NA	74545486	74570002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_38123_125	chr1	+	3267	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	-4	5	-4	-5	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTGTTTT	856	False	NA	33	True	AATAAA	-18	NA	74545212	74569996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
Isoform_38133_20	chr1	+	1521	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	35	-68	24	3	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCTACAAGATCTACAT	1166	False	NA	16	True	AATAAA	-17	NA	74627482	74631351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_38134_7	chr1	+	1548	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	5	-65	5	0	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1136	False	NA	13	True	AATAAA	-14	NA	74627452	74631348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_38136_3	chr1	+	1835	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	-28	-319	-28	0	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	1103	False	NA	NA	False	NA	NA	NA	74627419	74631602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_38137_4	chr1	+	1571	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	65	254	-9	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1207	False	NA	13	True	AATAAA	-14	NA	74627523	74631348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
Isoform_38139_8	chr1	+	2704	8	ISM	ENSMUSG00000033276.19	ENSMUST00000123154.2	3016	11	1387	7	1387	-4	3prime_fragment	FALSE	canonical	2	5	junction_2	4.82341229032404	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGATGAGTGTGATT	746	False	NA	NA	False	ATTAAA	-11	NA	74667010	74676046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_74667141_74667300_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
Isoform_38140_12	chr1	+	4254	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	8	5757	3	-4	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCCATGTGTGAT	NA	False	NA	6	True	TATAAA	-18	NA	74700911	74737132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_38141_7	chr1	+	4324	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-58	5753	-58	0	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCATGTGTGATTTAT	NA	False	NA	10	True	TATAAA	-22	NA	74700845	74737136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
Isoform_38143_4	chr1	+	2555	9	NIC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	34.3647712054074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119426	75124551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121995_75122323_75122460_75123073
Isoform_38144_77	chr1	+	2618	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-62	5	-54	1	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGTCTGCCTGC	NA	False	NA	10	True	AATAAA	-17	NA	75119367	75124552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
Isoform_38145_199	chr1	+	2558	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-3	6	-3	0	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119426	75124551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
Isoform_38146_12	chr1	+	2448	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	-11	1	-3	1	multi-exon	FALSE	canonical	3	9	junction_9	31.2054126359159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGTCTGCCTGC	NA	False	NA	10	True	AATAAA	-17	NA	75119426	75124552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
Isoform_38147_84	chr1	+	1175	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	25	6	5	-2	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2057	False	NA	10	True	AGTAAA	-16	NA	75145314	75148267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_38148_35	chr1	+	1074	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2057	False	NA	10	True	AGTAAA	-16	NA	75145314	75148267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
Isoform_38149_30	chr1	+	1184	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	43.344727846634	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATGAGTGCTGTTTCT	2046	False	NA	11	True	AGTAAA	-17	NA	75145303	75148268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_3815_9	chr10	+	3450	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-74	-2026	-55	-5	multi-exon	TRUE	canonical	3	980	junction_10	363.653962004586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTGGTGATATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	111309028	111334006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
Isoform_38150_11	chr1	+	1091	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	55.5417760689095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2037	False	NA	10	True	AGTAAA	-16	NA	75145294	75148267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
Isoform_38151_10	chr1	+	1216	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	98	2	-25	-2	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGAGTGCTGTTTC	2139	False	NA	10	True	AGTAAA	-16	NA	75145396	75148267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
Isoform_38152_61	chr1	+	2715	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	18	6	-14	-6	multi-exon	FALSE	canonical	2	42	junction_4	25.5582124222768	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTGTGTACTT	62	False	NA	13	True	AATAAA	-9	NA	75168821	75176025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_38154_5	chr1	+	3382	10	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	4	12	intron_retention	TRUE	canonical	3	90	junction_5	16.0100277218474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTCAGAGGGATTGTA	48	False	NA	31	True	AATAAA	-27	NA	75168807	75176043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
Isoform_38156_4	chr1	+	654	3	FSM	ENSMUSG00000026201.13	ENSMUST00000123825.8	636	3	-17	-1	9	0	multi-exon	FALSE	canonical	3	65	junction_1	98.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTGGTTTGGCCTTT	NA	False	NA	NA	False	CATAAA	-14	NA	75187500	75188879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75187669_75187883_75188059_75188568
Isoform_38157_34	chr1	+	1457	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187508	75190886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_38158_4	chr1	+	1942	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	9	4	intron_retention	FALSE	canonical	3	65	junction_1	67.8056044881247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTCAATGTGTCTGG	NA	False	NA	13	True	AATAAA	-21	NA	75187500	75190890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
Isoform_38159_3	chr1	+	2090	5	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	65	junction_1	75.0612250099877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187500	75190886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75190342_75190457
Isoform_38160_3	chr1	+	2557	4	NIC	ENSMUSG00000026201.13	novel	1570	7	NA	NA	-3	1	intron_retention	FALSE	canonical	3	65	junction_1	85.8150465957004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTAGGTCAATGT	NA	False	NA	7	True	AATAAA	-15	NA	75187486	75190884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187669_75187883_75188059_75188568_75190342_75190457
Isoform_38161_4	chr1	+	701	3	FSM	ENSMUSG00000026201.13	ENSMUST00000144355.8	691	3	-5	-5	-3	5	multi-exon	FALSE	canonical	3	176	junction_1	43	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTTGGCCTTTTGTTT	NA	False	NA	NA	False	CATAAA	-19	NA	75187486	75188884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75187697_75187883_75188059_75188568
Isoform_38162_155	chr1	+	1487	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	27	1362	-5	2	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGGTCAATGTGTCT	NA	False	NA	11	True	AATAAA	-19	NA	75187508	75190888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_38164_6	chr1	+	1409	7	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	75.900519687871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTAGGTCAATGT	NA	False	NA	7	True	AATAAA	-15	NA	75187486	75190884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75190219_75190342_75190457
Isoform_38165_3	chr1	+	1615	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	167	junction_4	31.580584752872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTAGGTCAATG	NA	False	NA	6	True	AATAAA	-14	NA	75187501	75190883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
Isoform_38166_14	chr1	+	1965	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187501	75190886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
Isoform_38167_10	chr1	+	2125	5	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	176	junction_1	31.068472765812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTAGGTCAATGT	NA	False	NA	7	True	AATAAA	-15	NA	75187491	75190884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75190342_75190457
Isoform_38168_4	chr1	+	2239	5	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	176	junction_1	31.2329953734828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTTAGGTCAATGTG	NA	False	NA	8	True	AATAAA	-16	NA	75187486	75190885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75189873_75190219_75190342_75190457
Isoform_38169_4	chr1	+	2564	4	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	176	junction_1	35.311313893551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187509	75190886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187697_75187883_75188059_75188568_75190342_75190457
Isoform_3817_53	chr10	+	1482	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	4	0	0	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
Isoform_38170_6	chr1	+	1592	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.9262977118624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGGTCAATGTGTCT	NA	False	NA	11	True	AATAAA	-19	NA	75187509	75190888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
Isoform_38171_20	chr1	+	1627	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1701	865	0	-865	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCATGGCCCTGTCAT	NA	False	NA	2	True	AATAAA	-13	NA	75338673	75344358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
Isoform_38172_3	chr1	+	1695	14	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	6	2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	88.7478310427522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTGGACTCCTACTTG	NA	False	NA	15	True	AATAAA	-19	NA	75412617	75419820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75412656_75412758_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38173_13	chr1	+	1662	14	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.7478310427522	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412617	75419819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_75412656_75412790_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38174_66	chr1	+	1494	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	44	1	6	0	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412617	75419817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38175_4	chr1	+	1498	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	77.4526288916149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412607	75419817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75412656_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38176_23	chr1	+	1797	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	6	1	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412617	75419819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38177_8	chr1	+	1788	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	14	junction_1	75.8797934601535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412618	75419817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75412957_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
Isoform_38178_11	chr1	+	4044	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	14	400	-9	0	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2754	False	NA	18	True	AATAAA	-17	NA	75498186	75513579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_3818_26	chr10	+	1523	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-37	0	-37	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309046	111332745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
Isoform_38180_16	chr1	+	4167	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	-11	-3	-11	0	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2752	False	NA	18	True	AATAAA	-17	NA	75498184	75513579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
Isoform_38181_5	chr1	+	4026	5	FSM	ENSMUSG00000032908.10	ENSMUST00000036172.10	4002	5	-25	1	-25	-1	multi-exon	FALSE	canonical	2	4	junction_1	2.12132034355964	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTCTGTGGATT	NA	False	NA	NA	False	AATAAA	-43	NA	78286956	78396925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78287140_78336707_78336867_78367111_78367292_78369995_78370086_78393511
Isoform_38182_18	chr1	+	3637	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-155	3911	-155	17	multi-exon	FALSE	canonical	2	10	junction_2	87	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTTAAGAGAGCTG	NA	False	NA	16	True	NA	NA	NA	78635599	78645318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78635821_78640857_78640998_78642042
Isoform_38190_92	chr1	+	3124	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	58	768	0	8	multi-exon	TRUE	canonical	3	149	junction_2	98.3136477470617	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTCGAATATATGCC	NA	False	NA	11	True	AATAAA	-22	NA	78635599	78684692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_38191_12	chr1	+	3894	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	58	-2	0	2	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTCAGAGTCTTGTAT	NA	False	NA	9	True	AATAAA	-21	NA	78635599	78685462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_38200_191	chr1	+	2993	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	-17	0	17	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATATGCCTGACACTGT	NA	False	NA	20	True	AATAAA	-31	NA	78635599	78684701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_38204_12	chr1	+	3749	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	-773	0	-3	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCTCTTCAGAGTCT	NA	False	NA	4	True	AATAAA	-16	NA	78635599	78685457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
Isoform_38206_270	chr1	+	1318	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	106	0	8	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753840	79759162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
Isoform_38208_3	chr1	+	1162	3	ISM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	146	102038	-44	23598	5prime_fragment	FALSE	canonical	3	170	junction_1	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	82294318	82321049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_82294370_82318039_82318552_82320450
Isoform_38209_222	chr1	+	3490	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	145	1	-45	-1	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTGTTGCTCGAGTC	NA	False	NA	13	True	AATAAA	-19	NA	82294317	82423086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
Isoform_3821_178	chr10	+	2592	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	120	2311	-9	-773	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTTTGTTTATGATGA	NA	False	NA	6	True	ATTAAA	-44	NA	111808688	111822026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
Isoform_38212_9	chr1	+	3542	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	91	3	91	-3	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294263	82423084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
Isoform_38221_3	chr1	+	1867	9	NIC	ENSMUSG00000026150.15	novel	1894	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	196.540350500858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
Isoform_38223_22	chr1	+	1708	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	-1	-1	0	1	multi-exon	FALSE	canonical	3	146	junction_5	154.121870675152	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
Isoform_38225_26	chr1	+	1648	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
Isoform_38227_14	chr1	+	1864	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	28	2	0	1	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
Isoform_38228_36	chr1	+	1705	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-22	-38	0	1	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
Isoform_38231_74	chr1	+	1645	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702638	82730109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
Isoform_38234_29	chr1	+	3254	13	FSM	ENSMUSG00002074851.1_ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	-196	-706	-5	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817198	82874102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38235_3	chr1	+	3991	13	FSM	ENSMUSG00002074851.1_ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	-214	-1425	14	719	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTTTAAAGACTATT	NA	False	NA	4	True	ATTAAA	-10	NA	82817180	82874821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38236_55	chr1	+	2546	13	FSM	ENSMUSG00002074851.1_ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	-201	7	-10	-7	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817193	82873389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_3824_9	chr10	+	2698	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	7	2318	7	-780	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAAAGTAGTTTGTTT	NA	False	NA	-1	True	ATTAAA	-37	NA	111808575	111822019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
Isoform_38240_9	chr1	+	2553	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-23	5514	-23	-7	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817180	82873389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
Isoform_38241_3	chr1	+	3272	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-33	4805	-33	-4	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCCCTAAGTTATGAAT	NA	False	NA	10	True	ATTAAA	-16	NA	82817170	82874098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
Isoform_38243_6	chr1	+	3269	13	Fusion	ENSMUSG00002074851.1_ENSMUSG00000026159.14	novel	2352	13	NA	NA	14	0	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817180	82874102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38244_14	chr1	+	2556	13	Fusion	ENSMUSG00002074851.1_ENSMUSG00000026159.14	novel	2352	13	NA	NA	14	-7	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817180	82873389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38245_5	chr1	+	2543	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	147.369056755103	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817187	82873389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
Isoform_38246_4	chr1	+	2505	13	FSM	ENSMUSG00002074851.1_ENSMUSG00000026159.14	ENSMUST00000063380.11	2896	13	-213	604	12	0	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTTTGTGTTCTTG	NA	False	NA	15	True	AATAAA	-15	NA	82817178	82873396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38247_3	chr1	+	2248	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	95	-7	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTATTGTTTTTGT	NA	False	NA	8	True	AATAAA	-8	NA	82817888	82873389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
Isoform_38248_10	chr1	+	875	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	24	2	12	-2	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTTCTGGTTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	84817585	84878206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
Isoform_38249_5	chr1	+	874	4	FSM	ENSMUSG00000073633.10	ENSMUST00000139562.8	881	4	5	2	5	-2	multi-exon	FALSE	canonical	3	8	junction_1	23.5843639350783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTTCTGGTTTGTA	4249	False	NA	NA	False	AATAAA	-13	NA	84844161	84878206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_84844265_84858812_84858922_84874210_84874384_84877717
Isoform_38250_3	chr1	+	3904	10	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	13	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	161.294072357845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTTGTGATGTCCTT	NA	False	NA	10	True	AATAAA	-11	NA	85721174	85779292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_85721543_85723077_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
Isoform_38252_124	chr1	+	3782	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	18	5	18	-5	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTTGTGATGTCCTT	NA	False	NA	10	True	AATAAA	-11	NA	85721179	85779292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
Isoform_38256_364	chr1	+	1913	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	301	16	-37	-16	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAACAACAA	NA	False	NA	-24	True	NA	NA	NA	85822302	85836380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
Isoform_38268_69	chr1	+	3205	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	41	-134	19	134	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGACCAGACTTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	85992381	86067007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
Isoform_38273_50	chr1	+	2187	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	-26	-1	3	1	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTCTCTTTATTGTT	NA	False	NA	9	True	AATAAA	-14	NA	86082510	86180212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
Isoform_38274_26	chr1	+	2522	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-25	2199	-21	-2199	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCAGTTTGCTCTCTGG	NA	False	NA	5	True	AATACA	-16	NA	86082480	86185350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_38275_7	chr1	+	2516	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	26	2154	0	-2154	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGCCTGCCCCAGAGT	NA	False	NA	50	True	NA	NA	NA	86082531	86185395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
Isoform_38276_5	chr1	+	2383	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	0	-2201	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	24.1024376360566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATCTCAGTTTGCTCTCT	NA	False	NA	3	True	AATACA	-14	NA	86082501	86185348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947
Isoform_38279_82	chr1	+	2344	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	232	6	-65	-6	multi-exon	FALSE	canonical	3	186	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATTAGCTGCTTCCTT	NA	False	NA	30	True	AATAAA	-21	NA	86231187	86235021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86231277_86232766
Isoform_3828_19	chr10	+	1240	2	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	27	41705	27	-39807	5prime_fragment	FALSE	canonical	3	118	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGGTGACGCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	115220890	115226972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_115221713_115226554
Isoform_38281_30	chr1	+	2589	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	-18	11	-18	-11	multi-exon	FALSE	canonical	3	186	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTGAATTAGCTGCT	NA	False	NA	25	True	AATAAA	-16	NA	86230937	86235016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86231277_86232766
Isoform_38291_9722	chr1	+	1207	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-4	13	-4	-13	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	9722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTCTCAAAGCCTGGT	NA	False	NA	44	True	AATAAA	-33	NA	86454443	86458421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
Isoform_3831_3	chr10	+	4094	20	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	1	17132	1	-15234	5prime_fragment	FALSE	canonical	3	82	junction_8	29.9156709505412	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATAAAAGAAAATGGAAG	NA	False	NA	NA	False	NA	NA	NA	115220864	115251545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524
Isoform_3832_3	chr10	+	2786	9	NNC	ENSMUSG00000020183.12	novel	5195	9	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.3418742493994	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTTTGTGTAAATGCG	NA	False	NA	NA	False	NA	NA	NA	117465404	117520848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_117465433_117465625_117465793_117495676_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182
Isoform_38325_7	chr1	+	2260	8	FSM	ENSMUSG00000026240.13	ENSMUST00000121534.8	5383	8	11	3112	11	-63	multi-exon	FALSE	canonical	3	5	junction_1	127.599500990643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGTGTCAATATTTGT	6018	False	NA	30	True	AATACA	-20	NA	86510636	86533985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86510819_86514737_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_38326_21	chr1	+	2039	7	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	11	-64	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	132.540140670247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAATATTTG	6018	False	NA	29	True	AATACA	-19	NA	86510636	86533984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_38328_377	chr1	+	1950	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	42	239	0	-65	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	NA	False	NA	28	True	AATACA	-18	NA	86514863	86533983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_3833_46	chr10	+	3075	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977736	118004903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_38331_14	chr1	+	2188	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	42	1	0	-1	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	86514863	86534221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_38332_7	chr1	+	2510	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	41	-320	-1	-158	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCCATATCCTCACTG	NA	False	NA	12	True	NA	NA	NA	86514862	86534542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
Isoform_38333_8	chr1	+	1860	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	1	717	1	-65	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	NA	False	NA	28	True	AATACA	-18	NA	86514864	86533983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
Isoform_38335_12	chr1	+	3168	22	FSM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	-13	-1	-2	1	multi-exon	FALSE	canonical	3	10	junction_6	26.8303649010897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631527	86977818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_38336_121	chr1	+	3104	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-15	-4	0	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631549	86977818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_38337_6	chr1	+	3232	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-143	-4	-108	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631421	86977818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
Isoform_38344_470	chr1	+	959	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	50	798	-15	-6	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87141685	87155780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_38347_30	chr1	+	3096	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	62	236	-3	-236	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87141697	87167974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
Isoform_38354_127	chr1	+	1423	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-310	6	-3	-6	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87141697	87155780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_38355_413	chr1	+	1085	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	28	6	28	-6	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTTGTCTCATGCTC	NA	False	NA	9	True	AATAAA	-9	NA	87142035	87155780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
Isoform_38356_14	chr1	+	3198	7	NIC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	64	-236	combination_of_known_junctions	FALSE	canonical	3	212	junction_6	831.352646126914	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87142071	87167974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
Isoform_3836_3	chr10	+	3010	13	FSM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	-94	6	-2	-6	multi-exon	FALSE	canonical	2	6	junction_12	29.3295452099452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAACTTGATGCTTCT	NA	False	NA	5	True	ATTAAA	-8	NA	117977734	118004896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
Isoform_38363_13	chr1	+	1908	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTGCCTTTTTGGT	1354	False	NA	NA	False	AATAAA	-25	NA	87192030	87238561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
Isoform_38364_4	chr1	+	951	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	0	2064	0	-2	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTAATAGTTTCATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	87254751	87283442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
Isoform_38368_3	chr1	+	3517	26	ISM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	32	8757	2	19	5prime_fragment	FALSE	canonical	3	77	junction_9	28.9699430444728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAGAAAGTAGAAGAAGAA	NA	False	NA	NA	False	AGTAAA	-26	NA	87254756	87369761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732
Isoform_3837_23	chr10	+	2961	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977715	118004903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
Isoform_38371_3	chr1	+	3570	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	-162	3043	2	-1415	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGTCATGCATGGA	NA	False	NA	NA	False	AATAAA	-8	NA	11484330	11668802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
Isoform_38376_3	chr1	+	2731	14	ISM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	56	13232	56	-4889	5prime_fragment	FALSE	canonical	3	377	junction_4	52.3853495938607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAACAATGATAA	9426	False	NA	NA	False	NA	NA	NA	87604016	87634992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655
Isoform_38377_29	chr1	+	3116	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	36	790	36	18	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9406	False	NA	20	True	NA	NA	NA	87603996	87647434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
Isoform_38379_13	chr1	+	3938	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	7	-3	7	2	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTCCTGACTGTGTGGT	9377	False	NA	17	True	AATAAA	-18	NA	87603967	87648227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
Isoform_38380_18	chr1	+	3905	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	36	1	36	-1	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9406	False	NA	13	True	AATAAA	-14	NA	87603996	87648223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
Isoform_38381_96	chr1	+	3299	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	36	790	36	18	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9406	False	NA	20	True	NA	NA	NA	87603996	87647434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_38382_7	chr1	+	3391	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-56	790	-56	18	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9314	False	NA	20	True	NA	NA	NA	87603904	87647434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_38383_8	chr1	+	3459	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	28	638	28	170	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTAACCGGCCGGGCTC	9398	False	NA	NA	False	ATTAAA	-19	NA	87603988	87647586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_38384_77	chr1	+	4075	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	55	-5	55	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9425	False	NA	19	True	AATAAA	-20	NA	87604015	87648229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_38385_5	chr1	+	4187	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-56	-6	-56	1	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9314	False	NA	20	True	AATAAA	-21	NA	87603904	87648230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
Isoform_38390_12	chr1	+	3117	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	8	5	8	1	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	7253	False	NA	18	True	AATAAA	-27	NA	87683742	87720145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_38391_18	chr1	+	3064	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	58	8	-5	-2	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCCTTGCGTCTTGA	7303	False	NA	15	True	AATAAA	-24	NA	87683792	87720142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_38392_118	chr1	+	3010	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-5	-1	-5	1	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	7303	False	NA	18	True	AATAAA	-27	NA	87683792	87720145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_38394_3	chr1	+	3149	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-147	2	59	-2	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCCTTGCGTCTTGA	7161	False	NA	15	True	AATAAA	-24	NA	87683650	87720142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_38395_3	chr1	+	3304	16	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	160	junction_8	19.8422668955832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCAAACTCCTTGCG	7244	False	NA	9	True	AATAAA	-18	NA	87683733	87720136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
Isoform_38396_5	chr1	+	723	4	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-11	29041	-11	-295	5prime_fragment	FALSE	canonical	3	363	junction_2	19.7033556081755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAATATTATCTTTTC	4059	False	NA	NA	False	ATTAAA	-9	NA	87780997	87843171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821
Isoform_38398_38	chr1	+	5704	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-9	0	-9	0	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4061	False	NA	20	True	AATAAA	-24	NA	87780999	87872212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
Isoform_38401_4	chr1	+	474	3	FSM	ENSMUSG00000097398.3	ENSMUST00000181016.3	479	3	4	1	4	-1	multi-exon	FALSE	canonical	3	8	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGTCTTGGCTCCT	NA	False	NA	16	True	NA	NA	NA	88682615	88683457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_88682681_88682805_88683013_88683255
Isoform_38402_6	chr1	+	357	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	17	True	NA	NA	NA	88682619	88683458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_88682774_88683255
Isoform_38403_3	chr1	+	2632	3	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-17	15157	-17	-15157	5prime_fragment	FALSE	canonical	3	96	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88998119	89067633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_88998320_89034979_89035059_89065280
Isoform_38404_3	chr1	+	5004	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-11	2	-11	-2	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTGGACATTTCA	NA	False	NA	10	True	ATTAAA	-20	NA	88998125	89082788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_38405_7	chr1	+	3704	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	31	1260	-7	-1260	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCCTTTTCAAATTAT	NA	False	NA	37	True	AGTAAA	-31	NA	88998167	89081530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
Isoform_38409_3	chr1	+	4330	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-63	7654	-63	-38	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTCATAAATATGCATT	NA	False	NA	1	True	AATAAA	-2	NA	89382464	89817685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_3841_4	chr10	+	2879	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	33.7594798440207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977736	118004902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
Isoform_38410_8	chr1	+	4277	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	0	7644	0	-28	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATTGATTTTTGCA	NA	False	NA	11	True	AATAAA	-12	NA	89382527	89817695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_38415_7	chr1	+	3949	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-96	225	-28	-225	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGAATTCGGCTGAAA	NA	False	NA	28	True	NA	NA	NA	89382499	89817498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_38416_4	chr1	+	4122	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-66	22	2	-22	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGATTTTTGCACAGACA	NA	False	NA	17	True	AATAAA	-18	NA	89382529	89817701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
Isoform_38417_48	chr1	+	2067	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-8	-687	-8	687	multi-exon	FALSE	canonical	3	31	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGATTCTTTGAAGCTCTT	NA	False	NA	22	True	GATAAA	-29	NA	89857947	89860271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89858176_89858432
Isoform_38419_3	chr1	+	2630	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-11	-1247	-11	-181	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTGACAGTCTTCAAT	NA	False	NA	NA	False	AATAAA	-24	NA	89857944	89860831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89858176_89858432
Isoform_3842_4	chr10	+	2293	3	FSM	ENSMUSG00000020225.11	ENSMUST00000134797.8	486	3	-6	-1801	-6	1801	multi-exon	FALSE	canonical	3	595	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120044678	120055423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_120044848_120051445_120051555_120053408
Isoform_38420_28	chr1	+	2011	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	24	1030	-2	-1030	multi-exon	FALSE	canonical	3	47	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATGTGTGCTTTGG	NA	False	NA	7	True	AATAAA	-15	NA	90131725	90143443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_90131810_90141516
Isoform_38422_133	chr1	+	1579	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	492	216	-3	1	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGCTCTAGAAATTTC	NA	False	NA	26	True	AATAAA	-31	NA	90531194	90540847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_38424_22	chr1	+	1772	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	512	3	-6	-3	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTAGTGGGTTACC	NA	False	NA	18	True	ATTAAA	-19	NA	90531214	90541060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_38426_6	chr1	+	2574	7	FSM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	18	1	-5	-1	multi-exon	FALSE	canonical	3	708	junction_6	25.9293913027925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTGGCTCTAGAAATT	NA	False	NA	24	True	AATAAA	-29	NA	90531215	90540845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_90531350_90532096_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
Isoform_38427_3	chr1	+	2261	16	FSM	ENSMUSG00000026303.7	ENSMUST00000027528.7	4499	16	0	2238	0	-2238	multi-exon	FALSE	canonical	0	0	junction_5	0.718021974284601	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCGCTGTGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	90842806	90876626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_90842976_90849566_90849701_90855704_90855927_90856044_90856158_90857811_90857916_90859215_90859339_90861038_90861244_90863034_90863175_90865375_90865460_90867080_90867234_90867441_90867598_90869409_90869503_90870593_90870681_90871416_90871472_90873335_90873437_90876304
Isoform_38428_9	chr1	+	3730	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTTGTTCTGGTCTTT	NA	False	NA	10	True	AATAAA	-24	NA	90981168	91045043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
Isoform_3843_167	chr10	+	858	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	43	3	0	-3	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTGTGTTCTTCTATA	NA	False	NA	28	True	ATTAAA	-40	NA	120044697	120060819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
Isoform_38430_8	chr1	+	2208	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981176	91056666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_38432_7	chr1	+	2136	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981176	91056666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
Isoform_38434_7	chr1	+	3892	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-37	-4	-23	4	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4227	False	NA	15	True	AATAAA	-21	NA	91072787	91098521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_38435_7	chr1	+	3355	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-15	511	-1	-9	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTACTCAAGACTCC	4249	False	NA	23	True	ATTAAA	-39	NA	91072809	91098006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_38436_7	chr1	+	3343	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	7	501	7	1	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACTCCAAGCTGTATT	4271	False	NA	33	True	TATAAA	-21	NA	91072831	91098016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_38437_7	chr1	+	3270	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGACTCCAAGCTGTA	4251	False	NA	31	True	TATAAA	-19	NA	91072811	91098014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
Isoform_38439_8	chr1	+	1351	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	20	-217	-6	30	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTGTATTCATTGT	331	False	NA	NA	False	NA	NA	NA	91178052	91213679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38440_3	chr1	+	1913	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	20	-779	-6	494	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGCCTAGCATTCAC	331	False	NA	8	True	AATAAA	-20	NA	91178052	91214241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38441_11	chr1	+	1326	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-31	-185	-3	31	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	334	False	NA	NA	False	NA	NA	NA	91178055	91213680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38443_15	chr1	+	1844	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	15	-496	-3	496	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCCTAGCATTCACAC	334	False	NA	10	True	AATAAA	-22	NA	91178055	91214243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38444_102	chr1	+	1281	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	15	67	-3	31	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTATTCATTGTA	334	False	NA	NA	False	NA	NA	NA	91178055	91213680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38447_3	chr1	+	1230	9	NIC	ENSMUSG00000034343.15	novel	1363	10	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	108.195136212309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGATGCTTTAATTATT	322	False	NA	NA	False	NA	NA	NA	91178043	91213647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_91178160_91181981_91182116_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38448_6	chr1	+	1820	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	10	3824	10	488	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCACTGCCTGCCTAGC	347	False	NA	2	True	AATAAA	-14	NA	91178068	91214235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_38449_14	chr1	+	1281	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-9	4382	-9	28	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTTTGTATTCATT	328	False	NA	NA	False	NA	NA	NA	91178049	91213677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
Isoform_3845_32	chr10	+	1139	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	14	511	14	0	multi-exon	FALSE	canonical	3	990	junction_2	137	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120062988	120067976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_120063029_120063878_120064109_120067107
Isoform_38452_3	chr1	+	2771	7	FSM	ENSMUSG00000026307.13	ENSMUST00000153621.8	2301	7	-24	-446	8	446	multi-exon	FALSE	canonical	3	66	junction_4	6.51707159867238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-42	NA	91226067	91239498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518
Isoform_38453_82	chr1	+	2192	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	8	2	8	-2	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCTGAAGTGGCCTGG	NA	False	NA	13	True	ATTAAA	-22	NA	91226067	91248795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
Isoform_38455_37	chr1	+	2851	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-39	3	-39	-3	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGCATTCTCTGTCT	NA	False	NA	5	True	ATTAAA	-17	NA	91294112	91301936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
Isoform_38458_18	chr1	+	3506	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	-35	3	12	-3	multi-exon	FALSE	canonical	2	37	junction_5	6.41943795619752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTATGGACTGTCAAA	8949	False	NA	5	True	ATTAAA	-21	NA	91422380	91457026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
Isoform_38460_3	chr1	+	3558	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	-89	5	-42	-5	multi-exon	FALSE	canonical	2	37	junction_5	6.41943795619752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGTATGGACTGTCA	8895	False	NA	3	True	ATTAAA	-19	NA	91422326	91457024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
Isoform_38461_38	chr1	+	3609	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-1	568	-1	-568	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTGGTAAGACTCGG	7182	False	NA	20	True	ATTAAA	-31	NA	92759365	92787933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
Isoform_38463_75	chr1	+	3020	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	49	268	7	1	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGACCTCCCTTCCTGT	6706	False	NA	20	True	ATTAAA	-14	NA	92838553	92848295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_38465_9	chr1	+	3095	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-21	263	-21	6	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCCCTTCCTGTCTGTC	6636	False	NA	25	True	ATTAAA	-19	NA	92838483	92848300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
Isoform_38467_8	chr1	+	2457	3	ISM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-37	-389	-37	389	intron_retention	FALSE	canonical	3	122	junction_1	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	2613	False	NA	NA	False	NA	NA	NA	92862450	92869083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_92862737_92865666_92865799_92867044
Isoform_38468_4	chr1	+	2738	3	ISM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-311	-396	79	396	intron_retention	FALSE	canonical	3	122	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2339	False	NA	NA	False	NA	NA	NA	92862176	92869090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_92862737_92865666_92865799_92867044
Isoform_38469_20	chr1	+	1277	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-10	1	-10	-1	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCGGACCTGCTGTGG	2640	False	NA	17	True	CATAAA	-17	NA	92862477	92868693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
Isoform_38470_96	chr1	+	2563	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	380	-41	-10	41	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTAGCCAGCTTCAAC	2640	False	NA	NA	False	AAAAAG	-19	NA	92862477	92875704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
Isoform_38472_16	chr1	+	2877	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	26	-1	26	1	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGTCTTGTTCCAAAA	2286	False	NA	NA	False	AATAAA	-15	NA	92862123	92875664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
Isoform_38475_101	chr1	+	3651	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	792	5872	-9	-5872	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCTGATAGACTTGAG	NA	False	NA	17	True	AATAAA	-19	NA	93271367	93295339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
Isoform_38478_230	chr1	+	1297	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	794	8224	-7	-8224	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGGTGAATTGATGAAA	NA	False	NA	15	True	ATTAAA	-16	NA	93271369	93292987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
Isoform_3848_149	chr10	+	734	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	8	922	8	96	multi-exon	FALSE	canonical	3	990	junction_2	137	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTTATGCTGAAGTT	NA	False	NA	5	True	AATAAA	-17	NA	120062982	120067565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_120063029_120063878_120064109_120067107
Isoform_38484_5	chr1	+	3542	9	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-15	-5870	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	208.918307898087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGATAGACTTGAGCT	NA	False	NA	19	True	AATAAA	-21	NA	93271361	93295341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93285478_93285584_93288447_93288535_93292611
Isoform_38491_221	chr1	+	1634	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	12	622	1	-40	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGGTTTGTTCTATTCCA	NA	False	NA	11	True	ATTAAA	-16	NA	15875881	15913654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_38492_6	chr1	+	1965	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	1	302	1	280	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTCTCGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	15875870	15913974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_38493_6	chr1	+	2114	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	154	0	-154	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15875869	15914122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_38499_7	chr1	+	1548	9	FSM	ENSMUSG00000025925.15	ENSMUST00000027057.8	1581	9	-6	39	1	-39	multi-exon	FALSE	canonical	3	29	junction_3	336.315978656977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15875881	15913655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
Isoform_38500_6	chr1	+	3346	14	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	9	-531	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	343.313233551171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406723	93437451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38501_208	chr1	+	3195	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	55	529	-2	-529	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTAGTCCTCTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	93406740	93437453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38502_70	chr1	+	3217	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	33	529	4	-529	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTAGTCCTCTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	93406718	93437453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38507_12	chr1	+	3189	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	26	4	26	-4	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406740	93437451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38509_6	chr1	+	3264	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	-2	5	-2	-5	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGAGTAGTCCTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	93406780	93437450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38510_5	chr1	+	3242	13	NIC	ENSMUSG00000026276.21	novel	477	6	NA	NA	-4	-531	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	275.56259371612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406937	93437451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_93407037_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
Isoform_38512_34	chr1	+	1367	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	100	1	58	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613481	93623485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_38513_15	chr1	+	1512	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-45	1	-45	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613336	93623485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_38514_7	chr1	+	1605	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-138	1	-138	-1	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGAGACTCTACTCTGC	NA	False	NA	5	True	AATAAA	-15	NA	93613243	93623485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_38515_3	chr1	+	2080	4	NIC	ENSMUSG00000026278.15	novel	1468	5	NA	NA	-46	3	intron_retention	FALSE	canonical	3	47	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTACTCTGCTTTC	NA	False	NA	9	True	AATAAA	-19	NA	93613335	93623489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_93614392_93616878_93617008_93621781_93621946_93622758
Isoform_38516_8	chr1	+	2911	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	11	-1183	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93679232	93717149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_38518_81	chr1	+	2872	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	118	1183	-12	-1183	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93682744	93717149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_38519_48	chr1	+	2958	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	32	1183	32	-1183	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-15	NA	93682658	93717149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
Isoform_38527_28	chr1	+	4527	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	10	-4	-8	-2	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTGAAAGTAGATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	93731696	93749821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
Isoform_38529_35	chr1	+	829	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	10	3694	-8	19	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACCTTATTTTGACTG	NA	False	NA	21	True	AATATA	-38	NA	93731696	93746123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
Isoform_38531_9	chr1	+	2915	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	5	312	5	-312	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTTACCTTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	93752966	93779758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_38532_6	chr1	+	2907	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	0	-308	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACCTTGTTCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	93752961	93779762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_38533_4	chr1	+	2849	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	23	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9625045767704	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGCTTACCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	93753018	93779756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_93753042_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
Isoform_38534_7	chr1	+	1226	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	70	816	65	-816	multi-exon	FALSE	canonical	3	133	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTAAGTGGTACAG	NA	False	NA	-3	True	AATAAA	-10	NA	95241417	95262193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_95241976_95252833_95252969_95261660
Isoform_38535_3	chr1	+	1286	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	10	816	5	-816	multi-exon	FALSE	canonical	3	133	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTAAGTGGTACAG	NA	False	NA	-3	True	AATAAA	-10	NA	95241357	95262193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_95241976_95252833_95252969_95261660
Isoform_38538_6	chr1	+	1000	3	FSM	ENSMUSG00000026333.15	ENSMUST00000112842.8	1037	3	-9	46	-2	-46	multi-exon	FALSE	canonical	3	41	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	97697894	97705818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_97697981_97703171_97703318_97705050
Isoform_38539_18	chr1	+	1829	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	13	204	6	-204	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATGCGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	97697909	97720490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
Isoform_38542_8	chr1	+	1632	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	11	-7	8	7	multi-exon	FALSE	canonical	3	53	junction_1	240	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTTTGTTTGGTTTT	NA	False	NA	12	True	NA	NA	NA	16735441	16748426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_16735730_16737888_16737998_16747191
Isoform_38543_89	chr1	+	1625	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	8	77	8	3	multi-exon	FALSE	canonical	3	512	junction_1	10.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTATGTGTTTGTTTGG	NA	False	NA	8	True	NA	NA	NA	16735441	16748422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_16735730_16737891_16737998_16747191
Isoform_38544_26	chr1	+	1704	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	5	1	5	-1	multi-exon	FALSE	canonical	3	512	junction_1	10.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGTTTTGTTTGCCT	NA	False	NA	21	True	ATTAAA	-11	NA	16735438	16748498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_16735730_16737891_16737998_16747191
Isoform_38547_24	chr1	+	924	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	-54	4	0	-4	multi-exon	FALSE	canonical	3	51	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATGTGTCTGCTTCA	NA	False	NA	7	True	AATAAA	-9	NA	105591607	105592871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_105592359_105592698
Isoform_38549_7	chr1	+	5370	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	2	-1044	2	-67	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTGTATTTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	105591609	105682844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_38551_3	chr1	+	5386	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	0	-66	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	105591585	105682845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
Isoform_38552_76	chr1	+	1866	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	33	-10	18	10	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTAAATTTATTTAT	NA	False	NA	16	True	NA	NA	NA	118249601	118261562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_38553_201	chr1	+	1624	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	33	232	18	-232	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTCCTTTTTGTCCA	NA	False	NA	24	True	AATATA	-18	NA	118249601	118261320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_38555_3	chr1	+	1502	6	FSM	ENSMUSG00000026377.13	ENSMUST00000112688.10	849	6	-6	-647	-6	-234	multi-exon	FALSE	canonical	2	4	junction_1	175.552157491727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAAGCTTCCTTTTTGTC	NA	False	NA	22	True	AATATA	-16	NA	118249577	118261318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118249728_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
Isoform_38556_3	chr1	+	1816	16	ISM	ENSMUSG00000064302.14	ENSMUST00000191445.7	4914	39	-17	100205	0	-616	5prime_fragment	FALSE	canonical	3	198	junction_15	22.4881203206394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATAAAGAAAGGAATAC	NA	False	NA	NA	False	NA	NA	NA	118317185	118434690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669
Isoform_38557_8	chr1	+	2388	5	ISM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	7	29550	7	17852	5prime_fragment	FALSE	canonical	3	1618	junction_3	162.015431363806	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAACAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118555682	118583348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445
Isoform_3856_19	chr10	+	2242	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	44	8	-20	-3	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTGTATGGGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	120869908	120936547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
Isoform_38564_3	chr1	+	1716	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	-40	-995	-27	-759	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTGTGAAGATAT	NA	False	NA	33	True	NA	NA	NA	119453862	119455954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_119454278_119454653
Isoform_38565_7	chr1	+	503	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-21	6	-13	-6	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTGGTTTGATTTA	NA	False	NA	9	True	AATAAA	-10	NA	120048903	120115913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
Isoform_38566_4	chr1	+	2098	2	FSM	ENSMUSG00000036907.12	ENSMUST00000037286.12	1999	2	-98	-1	-98	1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCTCCTGCTCTTTTT	6793	False	NA	NA	False	ATTAAA	-15	NA	120268213	120270904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_120269531_120270123
Isoform_38567_24	chr1	+	2360	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	46	4868	0	4	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTGAGCAACTGCTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	121358823	121429321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
Isoform_3857_4	chr10	+	1357	2	FSM	ENSMUSG00000034707.8	ENSMUST00000219847.2	1358	2	-17	18	1	-18	multi-exon	FALSE	canonical	3	195	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	121200995	121208137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_121201264_121207048
Isoform_38570_31	chr1	+	2661	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-20	92	-20	-92	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGTGCTGCTTCCTT	NA	False	NA	NA	False	TATAAA	-18	NA	125488732	125523465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
Isoform_38571_8	chr1	+	2731	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	16	-14	16	14	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTGATTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	125488768	125523571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
Isoform_38572_4	chr1	+	3092	6	ISM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	-5	119929	-2	-19805	5prime_fragment	FALSE	canonical	0	0	junction_2	2.41660919471891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127132749	127296144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139
Isoform_38573_3	chr1	+	3865	18	FSM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	-37	4608	-34	24	multi-exon	FALSE	canonical	0	0	junction_2	2.16930457818656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTGCTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	127132717	127411465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263
Isoform_38574_13	chr1	+	2842	4	FSM	ENSMUSG00000026349.15	ENSMUST00000125760.8	665	4	38	-2215	38	4	multi-exon	FALSE	canonical	3	495	junction_3	16.8193010820572	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127701938	127723541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094
Isoform_38575_32	chr1	+	1005	5	FSM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	38	-3	38	3	multi-exon	FALSE	canonical	3	475	junction_4	23.7539470404394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127701938	127723540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991
Isoform_38579_10	chr1	+	4572	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	38	2128	38	1	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701938	127733670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
Isoform_3858_3	chr10	+	2309	2	ISM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	20	5480	19	-4998	5prime_fragment	FALSE	canonical	3	147	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121575861	121583290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_121576116_121581235
Isoform_38583_4	chr1	+	4469	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	43	-1	43	1	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701943	127733670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
Isoform_38586_32	chr1	+	4219	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	22	2	6	-2	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3051	False	NA	16	True	AATAAA	-13	NA	127796531	127871603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
Isoform_3859_108	chr10	+	3106	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	13	4	12	-4	multi-exon	FALSE	canonical	3	147	junction_1	1	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACATGTATATATGGT	NA	False	NA	NA	False	AATAAA	-21	NA	121575854	121588766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_121576116_121581235_121581522_121586207
Isoform_38591_5	chr1	+	4489	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_38592_13	chr1	+	4582	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031039	128165473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
Isoform_38594_39	chr1	+	822	7	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	141	18490	141	1353	5prime_fragment	FALSE	canonical	3	326	junction_2	18.4179863780551	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCACTTAGCAGTG	235	False	NA	48	True	AAGAAA	-33	NA	128172039	128188625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570
Isoform_38601_38	chr1	+	2175	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	147	1791	147	567	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGAATGATCTTAT	241	False	NA	9	True	AATAAA	-12	NA	128172045	128205324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
Isoform_38603_30	chr1	+	2199	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	123	1791	123	567	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGAATGATCTTAT	217	False	NA	9	True	AATAAA	-12	NA	128172021	128205324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
Isoform_38607_6	chr1	+	2347	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	-25	1791	-25	567	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGAATGATCTTAT	69	False	NA	9	True	AATAAA	-12	NA	128171873	128205324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
Isoform_38610_51	chr1	+	2199	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	32	731	32	-2	5prime_fragment	FALSE	canonical	3	546	junction_5	45.0821734931215	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGTTTTGCTTGCAT	NA	False	NA	23	True	ATTAAA	-16	NA	131080949	131099245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
Isoform_38611_21	chr1	+	2117	15	FSM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	32	4	32	-4	multi-exon	FALSE	canonical	3	28	junction_14	169.094301066184	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGAGCCTTTGTGTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	131080949	131099972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131099657
Isoform_38612_823	chr1	+	1975	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	32	2	32	-2	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTTATTTCTAATCTA	NA	False	NA	39	True	AATAAA	-20	NA	131080949	131101213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
Isoform_38614_24	chr1	+	1402	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	-48	837	-48	-837	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACGTTTACTGTTTTA	NA	False	NA	13	True	AGTAAA	-26	NA	131455592	131466773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
Isoform_38615_6	chr1	+	3148	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-45	2227	-45	-1632	multi-exon	FALSE	canonical	3	9	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTGTTCTTGGGA	9055	False	NA	NA	False	AATATA	-18	NA	20960784	21007647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_20960911_21002283_21002464_21004805
Isoform_38616_35	chr1	+	3532	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	21	3347	4	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725139	131745852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
Isoform_38618_3	chr1	+	3392	11	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	3	1738	intron_retention	FALSE	canonical	0	0	junction_7	20.743432695675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725138	131745852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131734636_131734709_131739772_131739942_131741628_131741729_131743724
Isoform_3862_5	chr10	+	2270	5	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.0590036012156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACATGTATATATGGT	NA	False	NA	NA	False	AATAAA	-21	NA	121575855	121588766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_121576116_121581235_121581522_121586207_121587020_121587832_121587924_121587945
Isoform_38622_72	chr1	+	4659	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	35	3	35	-3	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTATCCCTGTGTG	5237	False	NA	20	True	AATAAA	-17	NA	131755749	131776600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
Isoform_38628_8	chr1	+	4702	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	-8	3	-8	-3	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTATCCCTGTGTG	5194	False	NA	20	True	AATAAA	-17	NA	131755706	131776600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
Isoform_38629_7	chr1	+	1197	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	26	3	26	-3	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGGGTTGTGATGCT	NA	False	NA	12	True	ATTAAA	-14	NA	131795003	131800622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
Isoform_3863_8	chr10	+	1020	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	-17	-5000	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	69	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	121575824	121583288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_121576116_121581235_121581522_121582845
Isoform_38630_20	chr1	+	1305	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	42	-145	26	-3	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGGGTTGTGATGCT	NA	False	NA	12	True	ATTAAA	-14	NA	131795003	131800622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
Isoform_3864_18	chr10	+	2915	5	NNC	ENSMUSG00000053684.9	novel	2968	3	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.6157447410968	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACATGTATATATGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	121575835	121588767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_121576116_121581402_121581522_121586207_121587359_121587380_121587924_121587945
Isoform_38642_32	chr1	+	2089	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-57	3966	-35	-324	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTGAGATTTATCCTT	9247	False	NA	NA	False	AATAAA	-29	NA	131838236	131860093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
Isoform_38645_27	chr1	+	2689	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-48	3357	-26	285	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCACCTAGTAGCAG	9256	False	NA	NA	False	TTTAAA	-40	NA	131838245	131860702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
Isoform_38646_8	chr1	+	6046	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-48	0	-26	0	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9256	False	NA	27	True	TATAAA	-18	NA	131838245	131864059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
Isoform_3865_12	chr10	+	3113	10	FSM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	1	3255	1	1091	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCATTGTGATGTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	122514687	122778445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_122515336_122618087_122618251_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
Isoform_38654_9	chr1	+	2684	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-24	-285	-24	285	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCACCTAGTAGCAG	9258	False	NA	NA	False	TTTAAA	-40	NA	131838247	131860702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
Isoform_38655_12	chr1	+	2051	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-2	326	-2	-326	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTGAGATTTATCC	9280	False	NA	NA	False	AATAAA	-27	NA	131838269	131860091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
Isoform_38658_34	chr1	+	3229	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890687	131910707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
Isoform_38659_41	chr1	+	3185	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	27	0	27	0	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890731	131910707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
Isoform_38661_6	chr1	+	4449	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	-17	1	-17	-1	multi-exon	FALSE	canonical	3	11	junction_4	2.9474565306379	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACCTTTCAGTGACTTC	26	False	NA	NA	False	NA	NA	NA	131935327	131954185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
Isoform_38662_15	chr1	+	2206	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-70	10	-8	-10	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGAAGACTGGTGCC	NA	False	NA	2	True	NA	NA	NA	21021841	21061055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
Isoform_38663_3	chr1	+	2943	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	-35	199	-35	-4	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTCTTGTTCACT	NA	False	NA	NA	False	ATTAAA	-20	NA	132243828	132261027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
Isoform_38664_6	chr1	+	5212	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	26	1044	-23	-1044	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	2951	False	NA	NA	False	NA	NA	NA	132345318	132393652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
Isoform_38665_4	chr1	+	5373	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-137	1046	-137	-1046	multi-exon	TRUE	canonical	3	42	junction_10	4.74561200830128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	2788	False	NA	NA	False	NA	NA	NA	132345155	132393650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
Isoform_38667_7	chr1	+	3381	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	94.1666657939292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAGTATACATGCTT	NA	False	NA	7	True	AATAAA	-16	NA	132405116	132433395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_38668_5	chr1	+	3496	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	18	5	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	114.801397843169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACATGCTTGTTTGTA	NA	False	NA	14	True	AATAAA	-23	NA	132405122	132433402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
Isoform_38669_105	chr1	+	3498	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAGTATACATGCTT	NA	False	NA	7	True	AATAAA	-16	NA	132405116	132433395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_3867_45	chr10	+	2081	8	ISM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	123674	3255	-8788	1091	3prime_fragment	FALSE	canonical	3	22	junction_1	4.03049599419025	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCATTGTGATGTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	122638360	122778445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
Isoform_38673_6	chr1	+	3736	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-226	0	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAAGTATACATGC	NA	False	NA	5	True	AATAAA	-14	NA	132404876	132433393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_38674_6	chr1	+	3685	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	185	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTGATGTTAATGAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	132405116	132433582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
Isoform_38675_5	chr1	+	3611	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	12	-767	12	1	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405116	132433394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
Isoform_38676_3	chr1	+	3590	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	61	-795	-7	25	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGCCTGCTTCTGGAA	NA	False	NA	34	True	AATAAA	-43	NA	132405165	132433422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
Isoform_38678_15	chr1	+	3356	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	58	14	-24	-14	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGAGAAGATGATCCTT	NA	False	NA	8	True	AATAAA	-21	NA	132808068	132867729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132808414_132864718
Isoform_38679_18	chr1	+	3298	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	110	20	28	-20	multi-exon	FALSE	canonical	3	16	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGTGGGGAGAAGATG	NA	False	NA	2	True	AATAAA	-15	NA	132808120	132867723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_132808414_132864718
Isoform_38681_6	chr1	+	3720	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	-37	5	-37	-5	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGCTATGTGACTTTA	5731	False	NA	10	True	AATAAA	-15	NA	133059044	133067516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133059649_133064400
Isoform_38682_4	chr1	+	3800	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	-107	-5	94	5	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTATGTATTTTAT	5661	False	NA	20	True	AATAAA	-25	NA	133058974	133067526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133059649_133064400
Isoform_38684_98	chr1	+	5458	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	134	2	-67	-2	multi-exon	FALSE	canonical	3	372	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGACTTTATGT	5701	False	NA	13	True	AATAAA	-18	NA	133059014	133067519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133061354_133064400
Isoform_38686_11	chr1	+	2795	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	89	2710	89	-2710	multi-exon	FALSE	canonical	3	372	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTCTTTTCCTATTTA	5656	False	NA	96	True	AATGAA	-17	NA	133058969	133064811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133061354_133064400
Isoform_38691_5	chr1	+	5568	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	22	4	22	-4	multi-exon	FALSE	canonical	3	372	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTATGTGACTTTAT	5589	False	NA	11	True	AATAAA	-16	NA	133058902	133067517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133061354_133064400
Isoform_38693_5	chr1	+	5647	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	-56	3	-56	-3	multi-exon	FALSE	canonical	3	372	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTATGTGACTTTATG	5511	False	NA	12	True	AATAAA	-17	NA	133058824	133067518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133061354_133064400
Isoform_38695_6	chr1	+	656	3	FSM	ENSMUSG00000115958.2	ENSMUST00000195286.5	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133251787_133254872_133255079_133257093
Isoform_38696_12	chr1	+	581	3	NIC	ENSMUSG00000115958.2	novel	656	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	18	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_133251787_133254947_133255079_133257093
Isoform_38697_5	chr1	+	450	2	NIC	ENSMUSG00000115958.2	novel	656	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	5608	False	NA	4	True	AATAAA	-16	NA	133251703	133257460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_133251787_133257093
Isoform_38698_3	chr1	+	651	2	FSM	ENSMUSG00000116158.2	ENSMUST00000178033.5	496	2	-154	-1	-154	1	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTGTTATTTTTCCC	8700	False	NA	5	True	AATAAA	-17	NA	133254795	133257461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133255079_133257093
Isoform_38699_141	chr1	+	2280	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	-2	19	-2	1	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGGTCTTGGAAGGACAG	NA	False	NA	6	True	ATTAAA	-16	NA	133291307	133308055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
Isoform_38703_9	chr1	+	926	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	243	-1	156	1	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCATTCATTTCTATG	NA	False	NA	18	True	AATAAA	-18	NA	21289041	21300392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
Isoform_38704_6	chr1	+	1108	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	58	2	-29	1	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTCATTCATTTCT	NA	False	NA	15	True	AATAAA	-15	NA	21288856	21300389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
Isoform_38705_3	chr1	+	1842	11	FSM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	-9	-5	-9	4	multi-exon	TRUE	canonical	1	1	junction_1	2.5219040425837	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGTTTCTGTGGCAATG	9936	False	NA	NA	False	AATAAA	-19	NA	134121176	134128974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
Isoform_38706_19	chr1	+	2191	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	217	12	3	-12	multi-exon	TRUE	canonical	3	35	junction_5	130.869925880624	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATCTCAAGGAATCAT	8188	False	NA	27	True	AATAAA	-15	NA	134333735	134339462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_38707_8	chr1	+	1923	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	217	11	3	-7	intron_retention	FALSE	canonical	3	291	junction_1	56.9597064885811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAAGGAATCATTGTCG	8188	False	NA	32	True	AATAAA	-20	NA	134333735	134339467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230
Isoform_38708_182	chr1	+	1615	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	217	5	3	-1	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATCATTGTCGTCGTGT	8188	False	NA	38	True	AATAAA	-26	NA	134333735	134339473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_38709_3	chr1	+	2142	7	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	6	-11	intron_retention	FALSE	canonical	3	337	junction_4	42.0452798249168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8224	False	NA	28	True	AATAAA	-16	NA	134333771	134339463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230
Isoform_38710_23	chr1	+	1833	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	6	-6	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGGAATCATTGTCGT	8224	False	NA	33	True	AATAAA	-21	NA	134333771	134339468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
Isoform_38711_173	chr1	+	2088	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	20	1015	20	-1012	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTTGGCATTCAAAGAGT	NA	False	NA	7	True	AATAAA	-15	NA	134343135	134360074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_38712_559	chr1	+	2041	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	78	1004	0	-1001	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTAACTGTGTTG	NA	False	NA	18	True	AATAAA	-26	NA	134343193	134360085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_38713_46	chr1	+	3074	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	47	2	-31	1	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTCTTGGTTCCAT	NA	False	NA	6	True	NA	NA	NA	134343162	134361087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_3872_67	chr10	+	3940	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-55	131	-21	-2	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTACTGAAGTTTT	NA	False	NA	12	True	TATAAA	-14	NA	125802066	125851097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
Isoform_38723_94	chr1	+	2170	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	266	1010	158	-1010	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGCATTCAAAGAGTTA	NA	False	NA	9	True	AATAAA	-17	NA	134343459	134360076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_38725_18	chr1	+	2431	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	0	1015	0	-1015	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGCTTGGCATTCAAAG	NA	False	NA	4	True	AATAAA	-12	NA	134343193	134360071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
Isoform_38730_4	chr1	+	3345	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	21	-5	multi-exon	TRUE	canonical	3	12	junction_1	47.209573199224	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134363386	134418606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_+_134363609_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_38731_62	chr1	+	3294	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-17	0	7	0	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	134383275	134418611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_38732_6	chr1	+	3412	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	11	-146	11	1	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGGATTTATTGTC	NA	False	NA	NA	False	NA	NA	NA	134383303	134418757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_38733_114	chr1	+	3252	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	7	149	7	-4	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTTAAGAGAATTTG	NA	False	NA	13	True	ATTAAA	-14	NA	134383275	134418607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_38734_3	chr1	+	3420	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	-11	-1	-11	1	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGGATTTATTGTC	NA	False	NA	NA	False	NA	NA	NA	134383257	134418757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
Isoform_38735_6	chr1	+	3171	12	NIC	ENSMUSG00000026455.15	novel	3220	12	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	48.4638401455445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTTAAGAGAATTTG	NA	False	NA	13	True	ATTAAA	-14	NA	134383275	134418607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416753_134416860_134417069
Isoform_38738_327	chr1	+	1970	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	891	0	-891	multi-exon	FALSE	canonical	3	479	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCATCTGTTTTCT	6638	False	NA	NA	False	NA	NA	NA	134422385	134435621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134422548_134433813
Isoform_38739_32	chr1	+	2855	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	6	0	-6	multi-exon	FALSE	canonical	3	479	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACGGGGCTGGCGAGAT	6638	False	NA	NA	False	ATTAAA	-7	NA	134422385	134436506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134422548_134433813
Isoform_3874_83	chr10	+	4575	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	242	0	-70	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814827	126835838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
Isoform_38740_12	chr1	+	2038	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-68	891	-68	-891	multi-exon	FALSE	canonical	3	479	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCATCTGTTTTCT	6570	False	NA	NA	False	NA	NA	NA	134422317	134435621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134422548_134433813
Isoform_38749_13	chr1	+	1005	6	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	-55	35631	-34	5205	5prime_fragment	FALSE	canonical	0	0	junction_3	380.374341931734	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTAAGAGATTTTTAC	6681	False	NA	22	True	NA	NA	NA	134487874	134523629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537
Isoform_3875_78	chr10	+	4603	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	214	0	-98	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814799	126835838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
Isoform_38753_33	chr1	+	5325	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	52	3337	16	426	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTGTTGGTGCTTTA	6767	False	NA	7	True	ATTAAA	-17	NA	134487960	134559686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_38754_122	chr1	+	4900	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	52	3762	16	1	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAACAACTAA	6767	False	NA	-19	True	NA	NA	NA	134487960	134559261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_38756_36	chr1	+	4927	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	25	3762	4	1	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAACAACTAA	6740	False	NA	-19	True	NA	NA	NA	134487933	134559261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_38758_16	chr1	+	5565	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	56	3093	20	670	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGACTACAGCTTCTT	6771	False	NA	8	True	AATAAA	-18	NA	134487964	134559930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_38761_7	chr1	+	5649	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-28	3093	-28	670	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGACTACAGCTTCTT	6687	False	NA	8	True	AATAAA	-18	NA	134487880	134559930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
Isoform_38764_6	chr1	+	976	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16579	-193	3665	193	3prime_fragment	FALSE	canonical	3	69	junction_1	2	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGTATTCGAACATTG	NA	False	NA	15	True	AATAAA	-21	NA	21327409	21335438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
Isoform_38766_200	chr1	+	1084	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	31	1	5	-1	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGTTTATATGAAAC	NA	False	NA	14	True	AATAAA	-16	NA	134890333	134901899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
Isoform_38769_117	chr1	+	1722	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074552	135084007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
Isoform_38770_17	chr1	+	1795	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-82	0	-82	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074479	135084007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
Isoform_38772_10	chr1	+	2076	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	-253	5	-253	-5	multi-exon	FALSE	canonical	3	16	junction_1	177.543684765187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135647545	135679965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_38773_364	chr1	+	1738	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	80	5	80	-5	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135656964	135679965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_38774_8	chr1	+	1808	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	11	4	11	-4	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTCTGCTTTCCTGTCT	NA	False	NA	20	True	AATAAA	-13	NA	135656895	135679966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
Isoform_38776_918	chr1	+	1411	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	22	2	22	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6767	False	NA	20	True	AATGAA	-27	NA	135693878	135696872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135694633_135696215
Isoform_38780_137	chr1	+	1476	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-43	2	-43	-2	multi-exon	FALSE	canonical	3	639	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTCTACTGAGTGAAAT	6702	False	NA	20	True	AATGAA	-27	NA	135693813	135696872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135694633_135696215
Isoform_38788_7	chr1	+	777	4	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	7660	5	2436	-5	3prime_fragment	FALSE	canonical	3	71	junction_1	12.2565175405668	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAATGGTTTCTGTAGC	6007	False	NA	38	True	ATTAAA	-19	NA	135735230	135738722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_135735349_135736370_135736548_135737363_135737474_135738350
Isoform_38789_17	chr1	+	2909	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	96	-12	96	12	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTTCCATACTTTTC	5714	False	NA	NA	False	NA	NA	NA	135746431	135761092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_3879_14	chr10	+	4836	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814566	126835838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
Isoform_38790_135	chr1	+	2300	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	316	377	316	258	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTGGTAATGTCGA	5934	False	NA	16	True	NA	NA	NA	135746651	135760703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_38791_38	chr1	+	2691	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	312	-10	312	10	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTCCGTTCCATACTTT	5930	False	NA	NA	False	NA	NA	NA	135746647	135761090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_38793_96	chr1	+	2521	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	95	377	95	258	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTGGTAATGTCGA	5713	False	NA	16	True	NA	NA	NA	135746430	135760703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
Isoform_38797_1072	chr1	+	1421	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	70	315	-25	247	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGCAGATCTCAAGGG	NA	False	NA	21	True	ATTAAA	-16	NA	135945774	135962765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
Isoform_38801_23	chr1	+	1570	6	FSM	ENSMUSG00000026411.18	ENSMUST00000117950.2	847	6	12	-735	12	247	multi-exon	FALSE	canonical	2	15	junction_1	164.577519728546	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGCAGATCTCAAGGG	NA	False	NA	21	True	ATTAAA	-16	NA	135945811	135962765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
Isoform_38805_10	chr1	+	2540	14	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	4	23572	4	4433	5prime_fragment	FALSE	canonical	3	43	junction_3	9.2946507489189	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTCTGCTACTTTT	6178	False	NA	NA	False	AAAAAG	-15	NA	136059130	136082164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
Isoform_38806_5	chr1	+	5854	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	10	2449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	15.6241539563335	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTGGAAACTGACTTG	6184	False	NA	29	True	AATATA	-30	NA	136059136	136102486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087751_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_38807_3	chr1	+	2539	14	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	5	4430	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	17.2472448704511	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGCTTCTCTGCTACT	6179	False	NA	NA	False	AAAAAG	-12	NA	136059131	136082161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841
Isoform_38808_9	chr1	+	2904	18	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	-937	2456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6602632626599	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGACTTGAAGTTTC	NA	False	NA	36	True	AATATA	-37	NA	136087158	136102493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_136087215_136087375_136087524_136087751_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_38809_5	chr1	+	2872	17	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	-940	2459	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	17.2839340139911	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTTGAAGTTTCTTC	NA	False	NA	39	True	AATATA	-40	NA	136087155	136102496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
Isoform_38811_69	chr1	+	2139	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	24	3	24	-3	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGTTATTTATTTCAGT	NA	False	NA	7	True	AATAAA	-13	NA	136343032	136367893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
Isoform_38812_3	chr1	+	1966	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	66	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	23.4004985701872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATCGTTATTTATTTCA	NA	False	NA	5	True	AATAAA	-11	NA	136343074	136367891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136367490
Isoform_38816_3	chr1	+	3706	20	ISM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	28050	-88	7545	5prime_fragment	FALSE	canonical	3	49	junction_12	7.93114412247141	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAGCAAAACAAA	NA	False	NA	NA	False	ATTAAA	-8	NA	136395584	136431199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
Isoform_38818_199	chr1	+	3103	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	68	1762	68	-1762	multi-exon	FALSE	canonical	3	143	junction_1	0	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	TTTAAA	-43	NA	136552706	136556029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_136552790_136553009
Isoform_38820_4	chr1	+	360	3	NNC	ENSMUSG00000056268.16	novel	730	9	NA	NA	-60	-77896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATATGGTACATTTA	NA	False	NA	NA	False	NA	NA	NA	138891386	138906958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_138891623_138893903_138893969_138906899
Isoform_38821_6	chr1	+	4119	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-4	-2183	combination_of_known_junctions	TRUE	canonical	3	41	junction_8	11.4355000396583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGTTTGCAAA	NA	False	NA	NA	False	NA	NA	NA	138891461	139099649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
Isoform_38822_4	chr1	+	4061	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	15	4130	-4	-2181	multi-exon	FALSE	canonical	3	22	junction_7	13.1823079402048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTTTGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	138891461	139099651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
Isoform_38823_4	chr1	+	3526	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-79	-1089	intron_retention	TRUE	canonical	3	36	junction_4	7.92464510246358	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAGTTTAGAAACTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	139349946	139375832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
Isoform_38826_10	chr1	+	3906	16	ISM	ENSMUSG00000033952.15	ENSMUST00000200083.5	6072	27	-8	19751	-8	3	5prime_fragment	TRUE	canonical	3	70	junction_14	8.2435159704798	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAACTAAAAAGAGA	NA	False	NA	NA	False	AAGAAA	-36	NA	139382501	139402075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982
Isoform_38827_15	chr1	+	624	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-44	0	5	0	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615308	143622514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
Isoform_38828_95	chr1	+	663	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	49	2625	-4	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615343	143622514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_38829_39	chr1	+	710	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	2	2625	2	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615296	143622514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_38831_5	chr1	+	3562	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	49	-274	-4	-1	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTGCTGAATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143615343	143625413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
Isoform_38836_11	chr1	+	1458	12	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	455.061706831934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTCCATTCTTCAATT	NA	False	NA	24	True	NA	NA	NA	143653032	143682678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
Isoform_38837_84	chr1	+	1320	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	0	376	0	-12	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCTGGCTAAACTCC	NA	False	NA	13	True	NA	NA	NA	143653009	143682667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
Isoform_38839_9	chr1	+	1654	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	40	2	7	-2	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCTTGGATTATTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	143653049	143683041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
Isoform_38842_7	chr1	+	1483	12	NIC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	458.199927492049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCATTCTTCAATTCTG	NA	False	NA	27	True	NA	NA	NA	143653007	143682681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143678665_143678816_143682421
Isoform_38845_50	chr1	+	1294	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	14	537	-10	-12	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCTGGCTAAACTCC	NA	False	NA	13	True	NA	NA	NA	143653032	143682667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
Isoform_38852_10	chr1	+	2701	19	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-37	33582	-37	-170	5prime_fragment	FALSE	canonical	3	82	junction_1	111.088622724226	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAACACCCCCTGGCT	NA	False	NA	NA	False	AATGAA	-21	NA	150268551	150291984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819
Isoform_38866_29	chr1	+	726	6	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	52	8402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	213.469810511932	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGGAATTGCTACACA	NA	False	NA	20	True	TTTAAA	-37	NA	150269052	150279648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278095_150279374_150279453_150279625
Isoform_38877_28	chr1	+	2545	18	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	49	33702	49	-170	5prime_fragment	FALSE	canonical	3	414	junction_6	51.6480637715441	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAACACCCCCTGGCT	NA	False	NA	NA	False	AATGAA	-21	NA	150269049	150291984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819
Isoform_38879_36	chr1	+	2769	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	13	1	4	-1	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGTCTGTAGCCTTTT	NA	False	NA	10	True	ATTAAA	-27	NA	151220272	151232549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
Isoform_38883_30	chr1	+	4261	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-52	-894	8	-156	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220276	151240010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_38886_107	chr1	+	3339	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	9	163	9	-156	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220236	151240010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_38887_225	chr1	+	3471	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	34	6	2	1	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCACTGTGGGATT	NA	False	NA	11	True	ATTAAA	-15	NA	151220261	151240167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_38889_544	chr1	+	3299	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	49	163	8	-156	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220276	151240010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_38891_47	chr1	+	3496	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	9	6	9	1	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCACTGTGGGATT	NA	False	NA	11	True	ATTAAA	-15	NA	151220236	151240167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
Isoform_38900_40	chr1	+	2458	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304410	151333911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_38904_251	chr1	+	2642	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	106	1	0	-1	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304398	151333911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_38906_23	chr1	+	2747	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	1	1	1	-1	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGACTGGGCTCGCG	NA	False	NA	14	True	AATAAA	-15	NA	151304293	151333911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
Isoform_38907_5	chr1	+	2577	14	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	51.733614448493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	13	True	AATAAA	-14	NA	151304399	151333910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151333213_151333341_151333432
Isoform_38908_7	chr1	+	4039	15	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-94	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151446842	151595094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_38910_68	chr1	+	3844	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	91	2596	12	1	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151447214	151595094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_38914_12	chr1	+	3878	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	57	2596	-22	1	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151447180	151595094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
Isoform_38918_3	chr1	+	2607	19	ISM	ENSMUSG00000043019.13	ENSMUST00000188145.7	3262	21	-19	7231	-19	-7231	5prime_fragment	TRUE	canonical	3	102	junction_16	20.6908460704513	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCCAGGGCGGGCAG	NA	False	NA	NA	False	NA	NA	NA	151631102	151687455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269
Isoform_38919_3	chr1	+	4076	12	FSM	ENSMUSG00000032649.15	ENSMUST00000044311.9	4093	12	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_2	1.8227216050694	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCCTGTGTTTCTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	152275597	152386446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_152276149_152344199_152344311_152347438_152347557_152348845_152348981_152360588_152360794_152365530_152365651_152371552_152371630_152375655_152375763_152378708_152378842_152379828_152379957_152382543_152382751_152384262
Isoform_3892_14	chr10	+	1058	2	FSM	ENSMUSG00000006732.15	ENSMUST00000135655.2	1057	2	1	-2	0	2	multi-exon	FALSE	canonical	3	433	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	126877826	126879873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126877940_126878928
Isoform_38921_8	chr1	+	1984	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-124	736	-71	-736	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGACAACTCAGAAGATT	435	False	NA	NA	False	ATTAAA	-21	NA	152683516	152712005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
Isoform_38922_9	chr1	+	1998	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	39	2416	9	639	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCTTTGTTGCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	24717749	24802113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_38923_10	chr1	+	1918	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	118	2417	9	638	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCCCTTTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	24717828	24802112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_38924_7	chr1	+	2101	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	-61	2413	-61	642	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTTGTTGCTTTTAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	24717649	24802116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
Isoform_38925_6	chr1	+	394	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	4	141	4	-141	multi-exon	FALSE	canonical	3	57	junction_2	72	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTATAGGTGTGGCTT	NA	False	NA	0	True	AAGAAA	-12	NA	152969229	152970202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_152969301_152969782_152969860_152969956
Isoform_38927_30	chr1	+	4012	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGTCTTTGTCCA	NA	False	NA	16	True	AATAAA	-17	NA	152969232	152995010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_38931_8	chr1	+	2096	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-24	-1847	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCGGGTTCTTATTTG	NA	False	NA	NA	False	AATAGA	-21	NA	152969201	152993063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_38933_6	chr1	+	4050	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-29	5	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTCTTTGTCCAGA	NA	False	NA	18	True	AATAAA	-19	NA	152969196	152995012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
Isoform_38934_7	chr1	+	2329	5	FSM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	5	5	5	-5	multi-exon	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATTTCCCAGGACAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	153616099	153621209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_153616259_153616608_153616720_153617365_153617428_153617708_153617876_153619379
Isoform_38936_3	chr1	+	2733	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	59	0	-59	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTGACTTGTTTCTT	NA	False	NA	28	True	TATAAA	-21	NA	153775689	153785410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
Isoform_38937_85	chr1	+	1354	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	2	1436	2	105	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTAATCTTGCTTTTGTT	NA	False	NA	24	True	NA	NA	NA	153775691	153784033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
Isoform_38939_30	chr1	+	2771	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-19	1837	-19	1575	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATGTGGGCCTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	155034441	155079568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
Isoform_38940_318	chr1	+	2468	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-19	2140	-19	1272	multi-exon	TRUE	canonical	3	152	junction_7	29.3257565972304	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGTATTTTATCTT	NA	False	NA	9	True	AATAAA	-19	NA	155034441	155079265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
Isoform_38943_9	chr1	+	1331	8	NNC	ENSMUSG00000026470.15	novel	4589	8	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	70.5112525395336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGGATGAGATTGGTC	NA	False	NA	NA	False	TATAAA	-14	NA	155034441	155081400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155080957
Isoform_38946_236	chr1	+	988	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	5	0	-1	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	15	True	NA	NA	NA	155433870	155448034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
Isoform_3895_51	chr10	+	1009	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	756	0	-6	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126877826	126881478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_38951_119	chr1	+	1447	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	48	4097	44	138	multi-exon	FALSE	canonical	3	134	junction_7	98.5478232605254	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	29	True	AATAAA	-21	NA	155433915	155562979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_38953_13	chr1	+	1591	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	9	3992	5	243	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGAAATTTATCACTG	NA	False	NA	6	True	AATATA	-19	NA	155433876	155563084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_38954_6	chr1	+	1654	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	31	3907	27	328	multi-exon	FALSE	canonical	3	134	junction_7	98.5478232605254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCCCTCTCTCTCT	NA	False	NA	91	True	ATTAAA	-16	NA	155433898	155563169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
Isoform_38955_16	chr1	+	2500	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	-13	4	-13	-4	multi-exon	FALSE	canonical	3	72	junction_1	87	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155911458	155929271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155911667_155916820_155916881_155927039
Isoform_38957_10	chr1	+	2426	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155911472	155929271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_155911667_155927039
Isoform_38958_13	chr1	+	2667	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155911462	155929271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_155911838_155916820_155916881_155927039
Isoform_3896_23	chr10	+	1351	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	414	0	52	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877826	126881820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_38960_85	chr1	+	2405	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-27	211	0	-4	multi-exon	FALSE	canonical	3	163	junction_1	41.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155916635	155929271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155916749_155916820_155916881_155927039
Isoform_38962_89	chr1	+	2342	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-24	211	3	-4	multi-exon	FALSE	canonical	3	145	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTCAGCAGGTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	155916638	155929271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155916749_155927039
Isoform_38963_8	chr1	+	2557	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	-1	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCTTTTGTCTCTTT	NA	False	NA	11	True	AATAAA	-20	NA	155916635	155929483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155916749_155927039
Isoform_38968_7	chr1	+	5087	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	0	48	0	-48	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTTTTTACTAA	NA	False	NA	3	True	AATAAA	-15	NA	155916635	155944559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
Isoform_38969_7	chr1	+	1755	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	0	-1134	0	-726	multi-exon	FALSE	canonical	3	246	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTTTCTCCTCTTAT	NA	False	NA	15	True	AATAAA	-19	NA	155916635	155928549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_155916881_155927039
Isoform_3897_14	chr10	+	1762	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	3	0	-3	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTTTGAGTGTTTGC	NA	False	NA	10	True	TTTAAA	-15	NA	126877826	126882231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
Isoform_38970_256	chr1	+	812	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	380	2	92	1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGGCCCAGTGTCT	NA	False	NA	33	True	AATAAA	-15	NA	157240301	157247804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_157240696_157241313_157241366_157247438
Isoform_38971_517	chr1	+	790	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	402	2	114	1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGGCCCAGTGTCT	NA	False	NA	33	True	AATAAA	-15	NA	157240323	157247804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_157240696_157241313_157241366_157247438
Isoform_38978_16	chr1	+	1623	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	-4	-1	-1	1	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	157286145	157316631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
Isoform_38980_610	chr1	+	602	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	45	2352	-43	-2	multi-exon	FALSE	canonical	3	2655	junction_1	51	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGGTCTTTCCTTCAA	NA	False	NA	15	True	AATAAA	-15	NA	160022829	160027388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_38981_141	chr1	+	849	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	45	2105	-43	245	multi-exon	FALSE	canonical	3	2655	junction_1	51	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGTTTCATCTTTTA	NA	False	NA	3	True	AATAAA	-11	NA	160022829	160027635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_38983_86	chr1	+	627	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	20	2352	20	-2	multi-exon	FALSE	canonical	3	2655	junction_1	51	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGGTCTTTCCTTCAA	NA	False	NA	15	True	AATAAA	-15	NA	160022804	160027388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_38984_12	chr1	+	889	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	11	2099	11	251	multi-exon	FALSE	canonical	3	2655	junction_1	51	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCATCTTTTAAATTTT	NA	False	NA	9	True	AATAAA	-17	NA	160022795	160027641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160022882_160024515_160024675_160026997
Isoform_38989_8	chr1	+	4087	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-10	6929	-10	232	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTTTATTTTAATAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	160733977	160795619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
Isoform_38995_266	chr1	+	500	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	3	-1	0	1	multi-exon	TRUE	canonical	3	1206	junction_7	1656.43137771865	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_38996_517	chr1	+	459	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	99	-1	0	1	multi-exon	FALSE	canonical	3	3085	junction_7	1053.46856146731	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_38999_33	chr1	+	344	8	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1954.09814262754	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864422_160865794_160865843_160866026
Isoform_39001_32	chr1	+	894	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
Isoform_39022_5	chr1	+	1399	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	223	3261	-14	-11	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGATCAAATTAGATTTT	NA	False	NA	NA	False	AATAAA	-11	NA	160898505	160911029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
Isoform_39023_36	chr1	+	1666	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	233	11	15	3	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTTCCAATTGAAGTTA	NA	False	NA	9	True	AATAAA	-15	NA	160898569	160913897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
Isoform_39024_9	chr1	+	1621	5	FSM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-13	389	3	-3	multi-exon	FALSE	canonical	3	21	junction_2	42.0200844834943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGAAGTTATTTATTCT	NA	False	NA	17	True	AATAAA	-23	NA	160898522	160913905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477_160911021_160913557
Isoform_39025_4	chr1	+	529	2	ISM	ENSMUSG00000044835.16	ENSMUST00000125018.8	673	5	4	11826	4	-11826	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGTCAAACTTACCTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	160970264	160979039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_160970289_160978534
Isoform_39026_21	chr1	+	3638	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTATGTTACACGTTT	NA	False	NA	5	True	NA	NA	NA	160970306	160998067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
Isoform_39028_6	chr1	+	3592	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-4	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.7634477270591	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTACACGTTTTC	NA	False	NA	7	True	NA	NA	NA	160970288	160998069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995541_160995565_160995688_160995735
Isoform_39030_39	chr1	+	2514	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	16	1792	1	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTCTTTTTTTTC	NA	False	NA	69	True	TATAAA	-12	NA	33758991	33779853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
Isoform_39031_79	chr1	+	2467	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	1	1854	1	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGCTTTTCCTTTCTT	NA	False	NA	7	True	TATAAA	-17	NA	33758976	33779791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
Isoform_39034_12	chr1	+	4306	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	15	1	0	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATTGTGTGTGGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	33758990	33781644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
Isoform_39036_6	chr1	+	1474	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	16	706	16	-706	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	11	True	ATTAAA	-14	NA	161796772	161799193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_161796849_161797795
Isoform_39037_3	chr1	+	1467	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	10	1813	8	-708	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCATTGTCTAGTATTT	NA	False	NA	9	True	ATTAAA	-12	NA	161796764	161799191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_161796849_161797808
Isoform_39038_23	chr1	+	2181	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	40	-760	3	760	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162398198	162423694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
Isoform_3904_1878	chr10	+	1356	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	58	639	-11	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899460	126903150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_39040_27	chr1	+	1327	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	40	94	3	-94	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTGTTTGAAAACGAG	NA	False	NA	22	True	AATAAA	-18	NA	162398198	162422840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
Isoform_39045_7	chr1	+	2626	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	115	11	3	-5	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAGTAAGCACTGT	NA	False	NA	62	True	AATAAA	-13	NA	162398198	162426642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
Isoform_39047_15	chr1	+	519	3	ISM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	84	123010	84	-123010	5prime_fragment	FALSE	canonical	3	150	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTAAGCAGAAGGAGTC	NA	False	NA	10	True	NA	NA	NA	163607235	163621668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_163607472_163610553_163610686_163621517
Isoform_39048_11	chr1	+	591	3	ISM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	10	123012	10	-123012	5prime_fragment	FALSE	canonical	3	150	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTAAGCAGAAGGAG	NA	False	NA	8	True	NA	NA	NA	163607161	163621666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_163607472_163610553_163610686_163621517
Isoform_3905_635	chr10	+	1386	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	28	639	28	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899430	126903150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_39050_15	chr1	+	3878	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	63	5	63	-5	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTCCAACTCTCATTT	NA	False	NA	13	True	ATTAAA	-20	NA	163607214	163744673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
Isoform_39051_9	chr1	+	3936	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	6	4	6	-4	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCCAACTCTCATTTT	NA	False	NA	14	True	ATTAAA	-21	NA	163607157	163744674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
Isoform_39052_3	chr1	+	1178	6	ISM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	223	14798	208	-4532	5prime_fragment	FALSE	canonical	3	79	junction_2	14.0939703419583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAAGTTTCTTTATGC	NA	False	NA	NA	False	ATTAAA	-16	NA	163757581	163767881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449
Isoform_39053_3	chr1	+	4331	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	22	15	-3	1	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGTTACAATTATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	163757355	163782680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39054_19	chr1	+	2965	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	291	1112	251	212	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAAAGCTCTTTTATGT	NA	False	NA	6	True	AATAAA	-15	NA	163757624	163781583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39056_7	chr1	+	3237	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	22	1109	-3	215	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757355	163781586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39058_8	chr1	+	3007	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	254	1107	214	217	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTTTTATGTGCTAT	NA	False	NA	11	True	AATAAA	-20	NA	163757587	163781588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_3906_53	chr10	+	1440	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	-26	639	-26	-16	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899376	126903150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
Isoform_39060_7	chr1	+	4061	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	294	13	254	-1	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTACAATTATTTCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	163757627	163782682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39061_14	chr1	+	2949	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	209	215	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757582	163781586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39064_3	chr1	+	3036	14	FSM	ENSMUSG00000026584.15	ENSMUST00000162234.2	4336	14	206	1094	206	213	multi-exon	FALSE	canonical	3	18	junction_6	30.7224644598249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAAGCTCTTTTATGTG	NA	False	NA	7	True	AATAAA	-16	NA	163757579	163781584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
Isoform_39065_18	chr1	+	1417	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	1	1	1	-1	multi-exon	FALSE	canonical	3	75	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGACTGTTCAATTTC	NA	False	NA	8	True	AATAAA	-15	NA	163822458	163824811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163822547_163823482
Isoform_39066_14	chr1	+	1505	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	7	1	7	-1	multi-exon	FALSE	canonical	3	49	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGACTGTTCAATTTC	NA	False	NA	8	True	AATAAA	-15	NA	163822464	163824811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_163822641_163823482
Isoform_39067_18	chr1	+	3409	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	20	3	20	-3	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076643	164092935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
Isoform_39068_219	chr1	+	3553	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	0	18	0	-2	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076614	164092936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
Isoform_39071_21	chr1	+	1878	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	28	3	28	-3	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGGTGTCATCTTG	NA	False	NA	17	True	AATAAA	-17	NA	164103181	164115413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
Isoform_39073_34	chr1	+	1732	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	3	5	3	1	multi-exon	FALSE	canonical	3	68	junction_2	20.0017750691572	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	164135243	164264864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_39074_18	chr1	+	1729	14	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	27.275061761302	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	164135243	164264864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_39075_3	chr1	+	704	4	FSM	ENSMUSG00000026575.16	ENSMUST00000193237.2	1974	4	-38	1308	-14	-1308	multi-exon	FALSE	canonical	3	68	junction_1	30.12566274052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGGGATTGGTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	164135627	164160498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164135820_164140421_164140508_164155861_164155970_164160180
Isoform_39078_6	chr1	+	690	6	FSM	ENSMUSG00000026575.16	ENSMUST00000192710.2	687	6	0	-3	0	1	multi-exon	FALSE	canonical	3	9	junction_1	52.9550752997293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTGACTTTGGTTTTA	7384	False	NA	NA	False	AATAAA	-15	NA	164200837	164264864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_164200904_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
Isoform_39080_133	chr1	+	746	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	185	94	-2	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288790	165308689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_39084_3	chr1	+	1331	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	-400	94	0	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288205	165308689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_39085_5	chr1	+	877	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	54	94	54	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288659	165308689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_39086_4	chr1	+	852	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	174	-1	-13	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCCCCACTTCATCTTT	NA	False	NA	108	True	AATAAA	-17	NA	165288779	165308784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
Isoform_39087_5	chr1	+	702	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288793	165308689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
Isoform_39089_66	chr1	+	2143	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	18	2	18	-2	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTTGGACTGATTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	165591332	165602875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
Isoform_3909_36	chr10	+	2019	7	FSM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	3	16	1	-16	multi-exon	FALSE	canonical	3	4641	junction_3	424.742274797318	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATGGTCTTTATTTT	NA	False	NA	13	True	AAAACA	-11	NA	126899485	126903150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
Isoform_39092_11	chr1	+	731	4	FSM	ENSMUSG00000000544.15	ENSMUST00000027847.7	787	4	57	-1	7	1	multi-exon	FALSE	canonical	3	10	junction_3	86.0736119067085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTCTTTCTCGGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	165958042	165981706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165981478
Isoform_39093_13	chr1	+	2499	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	16	0	16	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957822	165994079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_39094_70	chr1	+	2335	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	180	0	1	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957986	165994079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_39095_100	chr1	+	2299	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	210	6	-19	-5	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACTTTTCTTTGTTCA	NA	False	NA	4	True	AATAAA	-13	NA	165958016	165994073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_39096_13	chr1	+	2252	8	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_7	69.1452183776275	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958011	165994079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992854_165992911
Isoform_39097_3	chr1	+	2995	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	176	junction_5	20.3862698893152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958013	165994079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165992285_165992715
Isoform_39098_9	chr1	+	2178	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	10	junction_1	77.1974092829546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACTTTTCTTTGTTCA	NA	False	NA	4	True	AATAAA	-13	NA	165957982	165994073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_165958174_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
Isoform_39099_21	chr1	+	2229	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	-16	2	-16	-2	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTTCCTGTTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	166206649	166221188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
Isoform_39100_12	chr1	+	2276	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	-65	4	-65	-4	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCTTTTCCTGTTTAT	NA	False	NA	11	True	AATAAA	-11	NA	166206600	166221186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
Isoform_39101_41	chr1	+	1933	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	278	4	36	-4	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCTTTTCCTGTTTAT	NA	False	NA	11	True	AATAAA	-11	NA	166206943	166221186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
Isoform_39106_218	chr1	+	1193	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	381	-1	23	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136327	167158355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
Isoform_39107_20	chr1	+	1292	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	282	-1	-10	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136228	167158355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
Isoform_39112_16	chr1	+	2353	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	234	248	-11	-248	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTTTTTCTGTCC	NA	False	NA	14	True	AATAAA	-11	NA	167177793	167195853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_39114_8	chr1	+	2550	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	34	251	34	-251	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACGCTGTGTTTTTCTG	NA	False	NA	11	True	AATAAA	-8	NA	167177593	167195850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
Isoform_39118_3	chr1	+	2757	8	FSM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	285	719	285	-718	multi-exon	FALSE	canonical	2	2	junction_1	2.0995626366713	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTCAGTAGGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	171079969	171087487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
Isoform_39119_82	chr1	+	2099	9	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	1	46	junction_1	80.4478674359986	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	15	True	AATAAA	-15	NA	171097903	171104468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_39120_5	chr1	+	1979	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	91.0706284978862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097903	171104469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_39121_346	chr1	+	1993	8	FSM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	6	-1	-5	0	multi-exon	FALSE	non_canonical	1	74	junction_2	53.1005976368228	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097903	171104469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_39122_11	chr1	+	1870	8	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	74.0904025842892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097903	171104467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
Isoform_39124_6	chr1	+	3083	7	NNC	ENSMUSG00000052423.16	novel	1758	8	NA	NA	-4	2	intron_retention	FALSE	non_canonical	3	46	junction_6	66.4665747241089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTTCTGCATCT	NA	False	NA	18	True	AATAAA	-18	NA	171097904	171104471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678_171104391_171104422
Isoform_39126_18	chr1	+	2329	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	254	-20	0	20	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1446	False	NA	NA	False	AATAAA	-37	NA	171156966	171169919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39127_18	chr1	+	2243	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	325	-5	62	5	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGAAACTGAAATCT	1517	False	NA	NA	False	AATAAA	-22	NA	171157037	171169904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39132_69	chr1	+	2292	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	-5	-669	4	20	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1450	False	NA	NA	False	AATAAA	-37	NA	171156970	171169919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39135_22	chr1	+	2292	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-8	20	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAGGTCAGGTCAAAG	1649	False	NA	NA	False	AATAAA	-37	NA	171157169	171169919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39138_21	chr1	+	2241	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	8	-1400	8	18	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTGAGGTCAGGTCAA	1665	False	NA	NA	False	AATAAA	-35	NA	171157185	171169917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39140_4	chr1	+	1546	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-29	-668	12	1	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGACTCTGAAGTGTA	1628	False	NA	3	True	AGTAAA	-14	NA	171157148	171169185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39141_3	chr1	+	3179	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-5	-2325	-5	943	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGCTTCTATTTTG	1652	False	NA	NA	False	NA	NA	NA	171157172	171170842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
Isoform_39143_11	chr1	+	684	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-31	232	29	200	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173266	171185738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
Isoform_39144_1044	chr1	+	622	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	29	1084	29	200	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173266	171185738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
Isoform_39150_7	chr1	+	3665	7	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14229	10	14184	-10	3prime_fragment	FALSE	canonical	0	0	junction_5	9.51606828241346	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTAAACAGTGTATGT	874	False	NA	NA	False	AATAAA	-18	NA	171230750	171237798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
Isoform_39153_7	chr1	+	1848	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.998015837865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_39154_3	chr1	+	3346	11	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1205	intron_retention	FALSE	canonical	3	21	junction_1	69.6218356552023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGAGTTGTATTTA	6737	False	NA	NA	False	AATAAA	-13	NA	171238880	171247915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
Isoform_39155_16	chr1	+	1753	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	0	-638	0	2	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_39157_4	chr1	+	3249	11	Fusion	ENSMUSG00000103711.2_ENSMUSG00000026641.14	novel	1115	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	27	junction_10	65.466709097067	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGAGTTGTATTTA	6739	False	NA	NA	False	AATAAA	-13	NA	171238882	171247915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
Isoform_39158_65	chr1	+	1784	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	383	0	2	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
Isoform_39159_5	chr1	+	3287	11	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1210	intron_retention	FALSE	canonical	3	27	junction_10	51.4105047631318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTTGTATTTAATTTG	6737	False	NA	NA	False	AATAAA	-18	NA	171238880	171247920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
Isoform_39160_3	chr1	+	1926	9	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	185	junction_1	10.4035751066641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6737	False	NA	64	True	GATAAA	-16	NA	171238880	171246326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
Isoform_39161_13	chr1	+	2490	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	23	5	-21	-5	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTTTTTTTATGTTTT	NA	False	NA	18	True	ATTAAA	-18	NA	171265125	171292166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_39162_62	chr1	+	1902	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	23	593	-21	365	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTTTGTTGAACATG	NA	False	NA	15	True	AATAAA	-17	NA	171265125	171291578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_39163_3	chr1	+	2515	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	-8	11	-8	-11	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGGAATTTTTTTTA	NA	False	NA	12	True	ATTAAA	-12	NA	171265094	171292160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_39164_29	chr1	+	1934	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	-8	592	-8	366	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTGTTGAACATGG	NA	False	NA	16	True	AATAAA	-18	NA	171265094	171291579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
Isoform_39166_10	chr1	+	1933	5	FSM	ENSMUSG00000026553.18	ENSMUST00000138407.8	2973	5	163	877	1	-877	multi-exon	FALSE	canonical	3	862	junction_4	82.5753443831753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAAAATTG	3041	False	NA	NA	False	NA	NA	NA	171910372	171920250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730
Isoform_39170_11	chr1	+	4365	33	FSM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	-16	2	11	0	multi-exon	FALSE	canonical	1	15	junction_16	205.587019193668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	3051	False	NA	13	True	AATAAA	-18	NA	171910382	171949895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_39171_20	chr1	+	4642	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	-21	1	-21	-1	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	2743	False	NA	9	True	AATAAA	-14	NA	171910074	171949891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_39172_385	chr1	+	4336	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	285	1	9	-1	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3049	False	NA	9	True	AATAAA	-14	NA	171910380	171949891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
Isoform_39178_387	chr1	+	1904	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	13	0	-5	0	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954334	171962850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_39179_66	chr1	+	2402	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	14	-499	-4	499	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGTTCGTAACATCATT	NA	False	NA	27	True	AAGAAA	-24	NA	171954335	171963349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_39185_7	chr1	+	1884	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	162.388081117085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTTATTTTTCATCC	NA	False	NA	25	True	AATAAA	-15	NA	171954310	171962851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961773
Isoform_39186_32	chr1	+	2356	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	502	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCGTAACATCATTTCC	NA	False	NA	30	True	AAGAAA	-27	NA	171954334	171963352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_39190_9	chr1	+	2318	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	409	junction_5	19.2440466984814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954334	171962850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171954416_171956197_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
Isoform_39194_298	chr1	+	2715	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-2	41	-2	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975682	172023033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39197_142	chr1	+	3637	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	-883	0	1	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTGTGGTATGTGG	NA	False	NA	17	True	AGTAAA	-17	NA	171975684	172023957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39198_39	chr1	+	2788	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-75	41	-41	0	multi-exon	TRUE	canonical	3	418	junction_1	55.9704063816991	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975609	172023033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39199_18	chr1	+	3710	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-75	-881	-41	-1	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGTGTGGTATGT	NA	False	NA	15	True	AGTAAA	-15	NA	171975609	172023955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39204_270	chr1	+	2834	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	24	1	-12	-1	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTATCAAGTTAAAATT	NA	False	NA	14	True	ATTAAA	-16	NA	171975732	172023032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39206_97	chr1	+	3763	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	24	-928	-12	5	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGGTATGTGGTCCA	NA	False	NA	21	True	AGTAAA	-21	NA	171975732	172023961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
Isoform_39211_197	chr1	+	2411	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	20	7	20	-1	intron_retention	FALSE	canonical	3	675	junction_3	48.3553513067582	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGAGGCCTGTTGTGTC	3763	False	NA	12	True	AATAAA	-12	NA	172139953	172147401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
Isoform_39213_2174	chr1	+	2251	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	20	7	20	-1	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGAGGCCTGTTGTGTC	3763	False	NA	12	True	AATAAA	-12	NA	172139953	172147401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
Isoform_39215_33	chr1	+	2318	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-47	7	-47	-1	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGAGGCCTGTTGTGTC	3696	False	NA	12	True	AATAAA	-12	NA	172139886	172147401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
Isoform_39220_7	chr1	+	4134	21	FSM	ENSMUSG00000037995.16	ENSMUST00000052629.13	4133	21	-1	0	-1	0	multi-exon	TRUE	canonical	2	4	junction_16	2.95127091267474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	NA	False	NA	4	True	AATAAA	-16	NA	172309780	172326444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_39221_5	chr1	+	3647	17	ISM	ENSMUSG00000037995.16	ENSMUST00000111235.8	4205	21	7806	2	-967	-1	3prime_fragment	FALSE	canonical	2	4	junction_12	2.97318747306657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCACCTCTCTTTG	114	False	NA	3	True	AATAAA	-15	NA	172317686	172326443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
Isoform_39222_229	chr1	+	1332	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	34	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327845	172334947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334455_172334476
Isoform_39223_126	chr1	+	1352	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	448.58916616432	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTGGCTGTTTCTAG	NA	False	NA	25	True	AATAAA	-22	NA	172327821	172334943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334436_172334457
Isoform_39224_6	chr1	+	1764	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	-182	4	-182	-4	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTGGCTGTTTCTAG	9859	False	NA	25	True	AATAAA	-22	NA	172327431	172334943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
Isoform_39225_7	chr1	+	1834	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	70	4	-22	-4	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACAGCTCCACTTCA	5492	False	NA	2	True	ATTAAA	-15	NA	172348680	172373433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
Isoform_39226_3	chr1	+	2551	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-92	-327	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	39.9591588374931	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173246669	173293271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_173247122_173248136_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_39233_42	chr1	+	2206	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69723	337	4	-329	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173248167	173293269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_39235_3	chr1	+	2123	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-3	-329	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	40.7531143169527	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173248160	173293269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_39237_14	chr1	+	2056	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	16	-327	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173248179	173293271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_39238_4	chr1	+	2380	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	4	-15	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTCAGAAAGTTAGAAA	NA	False	NA	0	True	AATAAA	-18	NA	173248167	173293583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
Isoform_39239_3	chr1	+	2562	3	ISM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	10	240176	10	1	5prime_fragment	TRUE	canonical	3	7	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAATAAAAGCTT	NA	False	NA	NA	False	AATATA	-9	NA	174329400	174410119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_174331158_174364610_174364778_174409481
Isoform_3924_4	chr10	+	1681	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	-184	0	-31	0	multi-exon	FALSE	canonical	3	48	junction_1	9.6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	323	False	NA	NA	False	ATTAAA	-24	NA	127001062	127004392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
Isoform_39242_177	chr1	+	2838	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	213	4745	0	0	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_39245_5	chr1	+	2600	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	122.651234986799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGAAGTTTAAATGCTAA	9770	False	NA	9	True	AATAAA	-17	NA	175708363	175736302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_39246_10	chr1	+	2711	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	116.815132358479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9766	False	NA	10	True	AATAAA	-18	NA	175708359	175736303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_39247_10	chr1	+	2865	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	109.828275047913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCTAATTGGACAAAT	9768	False	NA	19	True	AATAAA	-27	NA	175708361	175736312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_175708423_175708697_175708794_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_3925_24	chr10	+	2427	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-32	0	-32	0	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	322	False	NA	8	True	GGGGCT	-23	NA	127001061	127008199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_39250_135	chr1	+	2985	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9766	False	NA	10	True	AATAAA	-18	NA	175708359	175736303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
Isoform_39255_11	chr1	+	3976	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	121	4705	121	1695	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTATAGTTCTTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	178015218	178080162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
Isoform_39256_3	chr1	+	4112	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	-18	4708	-18	1692	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTTTATAGTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	178015079	178080159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
Isoform_39261_49	chr1	+	466	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	0	5	0	-5	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGTTTTACATGA	NA	False	NA	15	True	ATTAAA	-18	NA	178146694	178150253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
Isoform_39262_6	chr1	+	781	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	-315	5	-315	-5	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGTTTTACATGA	NA	False	NA	15	True	ATTAAA	-18	NA	178146379	178150253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
Isoform_39264_3	chr1	+	756	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-53	2877	-35	165	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGGAAGGACAAGTTAA	NA	False	NA	NA	False	CATAAA	-20	NA	178233614	178309201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
Isoform_39265_6	chr1	+	650	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-70	3000	-52	42	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAATTTCACATTTTAT	NA	False	NA	NA	False	NA	NA	NA	178233597	178309078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
Isoform_39266_17	chr1	+	4566	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	140	3	1	-3	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTCCGAGAATTTAT	NA	False	NA	NA	False	TTTAAA	-14	NA	179374074	179455040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
Isoform_39267_15	chr1	+	4650	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	56	3	56	-3	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTCCGAGAATTTAT	NA	False	NA	NA	False	TTTAAA	-14	NA	179373990	179455040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
Isoform_39269_15	chr1	+	1910	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	35	3	-15	-3	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	179495809	179514751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
Isoform_3927_4	chr10	+	2240	10	FSM	ENSMUSG00000006731.11	ENSMUST00000217678.2	2212	10	-34	6	-32	-6	multi-exon	FALSE	canonical	3	10	junction_5	17.4384278371675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATTTTTACTTGTGTC	322	False	NA	2	True	GGGGCT	-17	NA	127001061	127008193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_39270_17	chr1	+	1843	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	105	0	55	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495879	179514754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
Isoform_3928_3	chr10	+	2184	5	FSM	ENSMUSG00000006731.11	ENSMUST00000220055.2	1499	5	-684	-1	-50	0	multi-exon	FALSE	canonical	3	64	junction_1	5.19615242270663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	304	False	NA	NA	False	ATTAAA	-24	NA	127001043	127004392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
Isoform_39280_1071	chr1	+	3882	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-8	-1	-3	1	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTGTTGTGTGCCTCAT	3139	False	NA	11	True	ATTAAA	-19	NA	180396485	180428820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_39281_1563	chr1	+	3614	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	3	256	3	-254	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3150	False	NA	14	True	AATAAA	-15	NA	180396496	180428563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_39282_89	chr1	+	3910	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-37	0	-32	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3110	False	NA	10	True	ATTAAA	-18	NA	180396456	180428819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
Isoform_3929_5	chr10	+	2217	10	ISM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	663	-1	29	1	3prime_fragment	FALSE	canonical	3	39	junction_5	12.6383699527165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTGTCTCTGTGG	1017	False	NA	9	True	GGGGCT	-24	NA	127001756	127008200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_3930_4	chr10	+	2926	10	NIC	ENSMUSG00000006731.11	novel	2395	11	NA	NA	-47	0	intron_retention	FALSE	canonical	3	39	junction_5	12.6383699527165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	307	False	NA	8	True	GGGGCT	-23	NA	127001046	127008199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
Isoform_3932_384	chr10	+	1652	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-13	145	6	-145	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9203	False	NA	21	True	ATTAAA	-16	NA	127102242	127117674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_39323_26	chr1	+	2967	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	192	1	8	-1	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTCTGAGAATCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	180468906	180518251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
Isoform_3933_18	chr10	+	1893	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-106	-3	-87	3	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAGTTTCAAAATATTC	9110	False	NA	19	True	AATAAA	-21	NA	127102149	127117822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_39332_13	chr1	+	3406	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	25	40	25	-40	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCGTCGATGTTTCTGT	NA	False	NA	15	True	ATTAAA	-12	NA	180553632	180581729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
Isoform_3934_179	chr10	+	1778	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	9	-3	9	3	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAGTTTCAAAATATTC	9225	False	NA	19	True	AATAAA	-21	NA	127102264	127117822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_39340_42	chr1	+	3178	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	34	1	34	-1	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTGGAGTTTTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	180678725	180695677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
Isoform_39342_14	chr1	+	3266	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-60	7	-60	-7	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAATTGTTTTGGAGTT	NA	False	NA	15	True	AATAAA	-15	NA	180678631	180695671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
Isoform_39346_1155	chr1	+	2471	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	2	0	-2	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGAGAGCGAGTCATC	NA	False	NA	19	True	AATAAA	-17	NA	180720672	180726666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
Isoform_3935_47	chr10	+	1739	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-100	145	-81	-145	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9116	False	NA	21	True	ATTAAA	-16	NA	127102155	127117674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
Isoform_39350_27	chr1	+	2785	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	-312	0	312	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCAGTGTCTGTTTA	NA	False	NA	22	True	NA	NA	NA	180720672	180726980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
Isoform_3936_7	chr10	+	1820	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	-145	intron_retention	FALSE	canonical	3	604	junction_8	37.2904329404861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9216	False	NA	21	True	ATTAAA	-16	NA	127102255	127117674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
Isoform_39366_335	chr1	+	1580	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	16	False	NA	32	True	NA	NA	NA	180731857	180735653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
Isoform_39373_411	chr1	+	1603	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	18	-1	18	1	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTTTCCTTATTT	NA	False	NA	9	True	AATAAA	-18	NA	180762604	180765966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
Isoform_39376_12	chr1	+	3226	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	75	5	-40	4	multi-exon	TRUE	canonical	3	13	junction_1	9.65307299163423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCATGCTTCTTC	NA	False	NA	10	True	AATAAA	-26	NA	180770098	180802672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_39377_3	chr1	+	3525	23	NIC	ENSMUSG00000026519.17	novel	704	3	NA	NA	-235	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.3524490385799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180773235	180802670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_180773563_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
Isoform_39379_3	chr1	+	2427	11	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-3076	-60	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	15.9862440867141	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34329459	34347425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
Isoform_39381_31	chr1	+	3223	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	39	6	39	-6	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATCTGATTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	180978534	180996553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
Isoform_39382_196	chr1	+	659	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	39	2570	39	43	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGGTGTTTTGTCTCC	NA	False	NA	46	True	AATAAA	-39	NA	180978534	180993989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
Isoform_39384_18	chr1	+	3260	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	6	2	6	-2	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTTCTATTGCT	NA	False	NA	NA	False	NA	NA	NA	180978501	180996557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
Isoform_39387_78	chr1	+	1309	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	39	19	8	-19	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGAAGTTTTGGAT	NA	False	NA	7	True	AATAAA	-15	NA	181952353	181959953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_181952541_181956248_181956318_181958900
Isoform_39388_102	chr1	+	726	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	39	602	8	0	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTATGTTTCTTTTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	181952353	181959370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_181952541_181956248_181956318_181958900
Isoform_39389_25	chr1	+	762	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	3	602	3	0	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTATGTTTCTTTTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	181952317	181959370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_181952541_181956248_181956318_181958900
Isoform_39392_3	chr1	+	1269	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	33	-479	-11	-9	multi-exon	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGGATTTCTTGTATA	NA	False	NA	17	True	AATAAA	-25	NA	181952334	181959963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_181952541_181958900
Isoform_39393_9	chr1	+	665	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	44	114	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTATGTTTCTTTTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	181952345	181959370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_181952541_181958900
Isoform_39394_39	chr1	+	4356	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	4	1	4	-1	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTCCTGGTTTTCCT	NA	False	NA	7	True	AATAAA	-20	NA	182236740	182289996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
Isoform_39399_16	chr1	+	1788	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	-349	4397	-349	445	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCGTCTATTCCCTGCC	5264	False	NA	15	True	NA	NA	NA	34478582	34484040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
Isoform_3940_242	chr10	+	864	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	23	3	3	-3	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTCTCACTTTTTCTT	NA	False	NA	26	True	AGTAAA	-15	NA	127126665	127132154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
Isoform_39400_304	chr1	+	1393	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	43	4400	-4	442	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTAGCGTCTATTCCCT	5656	False	NA	12	True	NA	NA	NA	34478974	34484037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
Isoform_39405_6	chr1	+	3066	9	FSM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	174	-1342	174	-17	multi-exon	FALSE	canonical	3	16	junction_5	5.55512151082224	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAGAAAACGA	NA	False	NA	NA	False	NA	NA	NA	182591750	182724139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
Isoform_39408_55	chr1	+	2395	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	12	1872	12	-4	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACATGATGGATGGTTG	NA	False	NA	NA	False	AATAAA	-8	NA	183078604	183104459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
Isoform_39409_45	chr1	+	2115	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.6279971183286	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACATGATGGATGGTTG	NA	False	NA	NA	False	AATAAA	-8	NA	183078863	183104459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103518_183103538
Isoform_3941_12	chr10	+	813	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	4	-217	3	-6	multi-exon	FALSE	canonical	0	0	junction_1	357	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAGCCTCTCACTTTTT	NA	False	NA	23	True	AGTAAA	-12	NA	127126665	127132151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127126761_127131189_127131348_127131591
Isoform_39410_7	chr1	+	2968	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	12	1299	12	568	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCTTTCTCATTTC	NA	False	NA	10	True	ATTAAA	-17	NA	183078604	183105032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
Isoform_39411_4	chr1	+	2639	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	-37	569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.6279971183286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCCTTTCTCATTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	183078911	183105033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343_183103516_183103538
Isoform_39414_8	chr1	+	2381	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	1	2	1	-2	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170325	183191018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
Isoform_39416_7	chr1	+	2639	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	67	86	67	-86	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCCTTGGT	NA	False	NA	NA	False	TTTAAA	-14	NA	183766644	183807747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
Isoform_39418_6	chr1	+	2707	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	0	85	0	-85	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATATCCTTGGTG	NA	False	NA	NA	False	TTTAAA	-15	NA	183766577	183807748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
Isoform_3942_3	chr10	+	2046	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219511.2	2217	16	328	-157	328	2	multi-exon	FALSE	canonical	3	14	junction_1	20.2809160433042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	7417	False	NA	12	True	ATTAAA	-18	NA	127158160	127165814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127158301_127158562_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_39421_4	chr1	+	4324	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	17	77	17	-77	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCAATCCTGTCTAA	NA	False	NA	11	True	AATAAA	-17	NA	184936330	185016305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_39422_30	chr1	+	4391	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	10	2651	10	-77	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCAATCCTGTCTAA	NA	False	NA	11	True	AATAAA	-17	NA	184936323	185016305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_39423_3	chr1	+	4967	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	24	2061	24	-25	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAACAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	184936337	185016895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
Isoform_39424_93	chr1	+	2187	11	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	1	46	junction_10	79.109354693361	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064376	185089967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674_185089202_185089221
Isoform_39425_16	chr1	+	2210	11	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	1	46	junction_10	79.109354693361	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064353	185089967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674_185089202_185089221
Isoform_39427_3	chr1	+	1270	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	-42	-2	-19	2	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATACGCTTAAGACTTAA	NA	False	NA	5	True	ATTAAA	-19	NA	185064326	185088980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_39428_80	chr1	+	2142	10	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	1	46	junction_9	73.8286303995047	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	185064376	185089967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674_185089202_185089221
Isoform_39429_15	chr1	+	2159	10	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.6005445767384	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGGGTAATTGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	185064356	185089965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674_185089200_185089220
Isoform_3943_9	chr10	+	1927	15	ISM	ENSMUSG00000040345.11	ENSMUST00000219511.2	2217	16	706	-154	706	-1	3prime_fragment	FALSE	canonical	3	18	junction_1	17.5692507361177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACATACATAGACTAAAT	7795	False	NA	9	True	ATTAAA	-15	NA	127158538	127165811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_39431_7	chr1	+	2058	10	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	1	19	junction_1	99.3545838566764	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGGGTAATTGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	185064376	185089965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674_185089202_185089221
Isoform_39432_4	chr1	+	2012	9	NNC	ENSMUSG00000026617.17	novel	1046	8	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.349444946497	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGGGTAATTGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	185064376	185089965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674_185089200_185089220
Isoform_39433_3	chr1	+	2082	9	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	107.599880924655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGCTGGGTAATTGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	185064376	185089964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_185064461_185073419_185073525_185077511_185077625_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_39434_3	chr1	+	2256	10	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	7	-9	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	91.6710436665449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGGGTAATTGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	185064383	185089965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_185064519_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
Isoform_39435_5	chr1	+	1229	9	NIC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	89.8244816294533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTAATACGCTTAAGAC	NA	False	NA	1	True	ATTAAA	-15	NA	185064376	185088976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_185064519_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
Isoform_3944_3	chr10	+	1922	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	26	-2	-23	2	multi-exon	FALSE	canonical	2	5	junction_1	22.9759294335035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	8858	False	NA	12	True	ATTAAA	-18	NA	127159601	127165814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_3945_10	chr10	+	1722	12	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1886	-2	1319	2	3prime_fragment	FALSE	canonical	3	51	junction_1	7.05117070169648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	NA	False	NA	12	True	ATTAAA	-18	NA	127161510	127165814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
Isoform_39460_70	chr1	+	4884	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	14	8	0	-8	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTATCTATTTGGTTC	NA	False	NA	14	True	AATAAA	-16	NA	185095254	185160549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
Isoform_3948_3	chr10	+	3911	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	63	-3	combination_of_known_junctions	TRUE	canonical	3	158	junction_11	25.3408705892718	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAAAAAAAGCAAAAAA	NA	False	NA	-17	True	NA	NA	NA	127216730	127335215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
Isoform_39480_3	chr1	+	2771	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	57	3008	57	-6	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAACTGTATTGAGAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	185187101	185197951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
Isoform_39481_5	chr1	+	840	7	ISM	ENSMUSG00000026126.16	ENSMUST00000027302.14	1559	15	11690	9	-1265	-9	3prime_fragment	FALSE	canonical	2	6	junction_1	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAATAGGGGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34510535	34512856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
Isoform_39484_15	chr1	+	4813	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	9	-275	-2	-2	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGTTGTTGGTGTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	186947716	187083899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
Isoform_39486_3	chr1	+	3639	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-85	24720	-85	-1	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATATTGTTGGATTGTA	NA	False	NA	1	True	AATAAA	-14	NA	189460379	189584172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
Isoform_39487_7	chr1	+	3547	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	10	24717	3	2	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	4	True	AATAAA	-17	NA	189460474	189584175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
Isoform_39488_3	chr1	+	2876	7	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	121564	6460	4789	167	3prime_fragment	FALSE	canonical	3	10	junction_5	3.54729944229879	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTCTGTGAGTTATTA	NA	False	NA	NA	False	NA	NA	NA	189582028	189602432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
Isoform_3949_51	chr10	+	933	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	0	1	0	-1	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGCGCCTGCTAATC	NA	False	NA	NA	False	AATACA	-20	NA	127350835	127353022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
Isoform_39492_15	chr1	+	3198	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	48	468	48	-468	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTACTCATTTATTCC	NA	False	NA	14	True	AATAAA	-14	NA	190660736	190678691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_39499_7	chr1	+	3055	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	7	-468	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTACTCATTTATTCC	NA	False	NA	14	True	AATAAA	-14	NA	190661025	190678691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
Isoform_39504_3	chr1	+	843	5	FSM	ENSMUSG00000062510.13	ENSMUST00000139340.8	837	5	-6	0	6	0	multi-exon	FALSE	canonical	2	3	junction_4	96.9442494426565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTCTGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	190795214	190809136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190808813
Isoform_39505_147	chr1	+	2968	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-8	1919	-1	-1919	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATTTTTACTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	190795219	190816752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
Isoform_39506_3	chr1	+	2915	5	NIC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-1	-1917	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	96.8229698986764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTTTTACTGTATTT	NA	False	NA	15	True	AATAAA	-19	NA	190795219	190816754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_190795470_190797371_190797451_190802186_190802318_190812685_190812754_190814367
Isoform_39507_60	chr1	+	2234	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	10	2	10	-2	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCCTGCTACCTTTGT	NA	False	NA	4	True	AATAAA	-13	NA	191058118	191083109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
Isoform_39508_20	chr1	+	2601	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	13	-368	13	368	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGTGTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	191058121	191083479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
Isoform_3951_23	chr10	+	3726	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	38	11	22	-11	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	2309	False	NA	-17	True	AATAAA	-11	NA	127478892	127496815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_39511_3	chr1	+	2390	15	ISM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	116	9776	-10	4277	5prime_fragment	FALSE	canonical	2	189	junction_14	28.7147299183836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTGTTGTGTTT	8309	False	NA	NA	False	AGTAAA	-23	NA	191307863	191346024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750
Isoform_39512_89	chr1	+	4207	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	127	1013	1	-71	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTTACCTTTTTT	8320	False	NA	27	True	AATAAA	-16	NA	191307874	191354787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_39513_124	chr1	+	3226	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	126	1995	0	47	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCGAGACAGGGT	8319	False	NA	NA	False	AATAAA	-17	NA	191307873	191353805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_39515_8	chr1	+	5179	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTGTGAAAGTAACTG	8316	False	NA	5	True	AATAAA	-15	NA	191307870	191355803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353908_191353955
Isoform_39516_7	chr1	+	3322	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	34	1991	34	51	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGAGACAGGGTTTCT	8227	False	NA	NA	False	AATAAA	-21	NA	191307781	191353809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_39519_3	chr1	+	3082	19	FSM	ENSMUSG00000037461.11	ENSMUST00000194877.6	3069	19	11	-24	-9	24	multi-exon	FALSE	canonical	1	2	junction_1	68.875894831856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAAGTGCTTTTTTTT	8310	False	NA	NA	False	AAGAAA	-19	NA	191307864	191353782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_3952_3	chr10	+	3621	22	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	149	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	73.19724540373	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTACACAATCTGAAAAGAA	2436	False	NA	6	True	AATAAA	-34	NA	127479019	127496838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494129_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_39520_6	chr1	+	2978	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	-23	1047	-3	53	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGACAGGGTTTCTCT	8296	False	NA	NA	False	AATAAA	-23	NA	191307850	191353811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_39521_3	chr1	+	3954	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	-24	72	-4	-72	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8295	False	NA	26	True	AATAAA	-15	NA	191307849	191354786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
Isoform_39523_15	chr1	+	2763	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	184	4286	-9	-8	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACCAAAAAGAGAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	191450129	191512081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
Isoform_39526_336	chr1	+	3156	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	70	1	4	-1	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553625	191565161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
Isoform_39535_85	chr1	+	3135	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553625	191565161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
Isoform_39538_3	chr1	+	2609	6	ISM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	37	4093	0	-2	5prime_fragment	FALSE	canonical	3	14	junction_5	6.40624695121879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGTGGAAAGTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	34840821	34848297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722
Isoform_39539_63	chr1	+	2680	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	37	570	0	0	multi-exon	FALSE	canonical	3	11	junction_6	6.35959467611297	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTGGTCAGCTGG	NA	False	NA	10	True	CATAAA	-19	NA	34840821	34851820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
Isoform_3954_4	chr10	+	1655	6	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15174	-19	-1240	19	3prime_fragment	FALSE	canonical	3	57	junction_1	71.0070419043069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCTGAAAAGAAAGACACG	834	False	NA	13	True	AATAAA	-41	NA	127494028	127496845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_39540_3	chr1	+	4073	7	NIC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	11	junction_4	6.70198975429437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTGCTGGTCAGC	NA	False	NA	7	True	CATAAA	-16	NA	34840821	34851817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34846853_34848777_34849636_34850166_34850245_34850758
Isoform_39542_14	chr1	+	4108	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	6	-1	6	1	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATAAAGCTAGAGT	NA	False	NA	NA	False	AATAAA	-11	NA	192835424	192854332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
Isoform_39543_21	chr1	+	1948	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	8	2157	8	377	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCCTTAAAACTCTGAC	NA	False	NA	NA	False	NA	NA	NA	192835426	192852174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
Isoform_39544_8	chr1	+	2668	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	7	-418	1	418	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAGAAAG	968	False	NA	NA	False	NA	NA	NA	192855894	192859026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_192856089_192856552
Isoform_39545_8	chr1	+	2253	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	5	-1	-1	1	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCCTGAAATCATTTGA	966	False	NA	NA	False	AATAAA	-18	NA	192855892	192858609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_192856089_192856552
Isoform_39546_3	chr1	+	2782	7	FSM	ENSMUSG00000026123.12	ENSMUST00000156687.8	5176	7	-6	2400	-6	-2400	multi-exon	FALSE	canonical	3	235	junction_4	21.2733531808118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAGAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	34889050	34910637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380
Isoform_39547_237	chr1	+	3300	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-18	-3	-2	3	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATTGTGACTTCTGT	NA	False	NA	21	True	ATTAAA	-21	NA	34889054	34918664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
Isoform_39548_3	chr1	+	905	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-43	2417	-27	-2414	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGTAATCTAATAATTG	NA	False	NA	NA	False	TTTAAA	-13	NA	34889029	34916244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
Isoform_3955_5	chr10	+	1580	4	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15392	11	-1022	-11	intron_retention	FALSE	canonical	3	216	junction_3	14.6590889515307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	1052	False	NA	-17	True	AATAAA	-11	NA	127494246	127496815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457
Isoform_39551_3	chr1	+	3544	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	172	3	172	-3	multi-exon	FALSE	canonical	3	381	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGCTGTGGTCTG	1935	False	NA	17	True	AATAAA	-12	NA	36107652	36145524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36108266_36142593
Isoform_39552_38	chr1	+	2177	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	0	2463	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.46572158042361	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGGTGTACAGCACT	NA	False	NA	NA	False	AATAAA	-25	NA	36346834	36359609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_39553_5	chr1	+	2051	6	FSM	ENSMUSG00000037447.17	ENSMUST00000116629.9	2056	6	3	2	-1	0	multi-exon	FALSE	canonical	3	6	junction_2	8.63481325796916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGGGGTGTACAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	36346837	36359607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36346918_36355289_36355409_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_39554_8	chr1	+	2174	7	FSM	ENSMUSG00000037447.17	ENSMUST00000126413.8	870	7	21	-1325	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.27479439153761	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGGTGTACAGCACT	NA	False	NA	NA	False	AATAAA	-25	NA	36346834	36359609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36346918_36355292_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
Isoform_39556_1542	chr1	+	485	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	87	293	-39	2	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730651	36732469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_39557_40	chr1	+	571	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	-1	295	-1	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTAGTCTTATGTC	NA	False	NA	23	True	AATAAA	-28	NA	36730563	36732467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_3956_89	chr10	+	1503	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15392	11	-1022	-11	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAAAATAAATAATC	1052	False	NA	-17	True	AATAAA	-11	NA	127494246	127496815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
Isoform_39560_21	chr1	+	788	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	76	1	-50	-1	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCTAAAAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	36730640	36732761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_39561_53	chr1	+	633	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	87	145	-39	-145	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTATTTGTT	NA	False	NA	9	True	TTTAAA	-16	NA	36730651	36732617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
Isoform_39564_4	chr1	+	1252	6	FSM	ENSMUSG00000026117.11	ENSMUST00000190128.2	1338	6	87	-1	87	1	multi-exon	FALSE	canonical	3	25	junction_2	6.93974062915899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36818151	36821897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
Isoform_39565_4	chr1	+	1449	9	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71280	46271	-55	-2	internal_fragment	TRUE	canonical	3	35	junction_7	9.96164519544839	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGCAGATTTCTCCCT	NA	False	NA	3	True	AATAAA	-20	NA	37139693	37180415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
Isoform_39566_307	chr1	+	2431	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	72	4	-1	-4	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTGCTTTATATAGTAC	NA	False	NA	17	True	AATAAA	-18	NA	4878117	4916958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_39567_34	chr1	+	2475	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	28	4	21	-4	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTGCTTTATATAGTAC	NA	False	NA	17	True	AATAAA	-18	NA	4878073	4916958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_39569_11	chr1	+	2680	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	-163	-10	-128	10	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTACTGTTTCTTTTTTCT	NA	False	NA	31	True	AATAAA	-32	NA	4877882	4916972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
Isoform_39570_13	chr1	+	2333	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	-16	-1387	-1	0	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878117	4916962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
Isoform_39571_7	chr1	+	2248	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	45	4	-2	-4	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
Isoform_39572_66	chr1	+	1045	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	45	4	-2	-4	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_39574_4	chr1	+	1067	6	NIC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	192.902669758612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469242	37478065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_37469364_37470377_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_39575_4	chr1	+	1103	6	NIC	ENSMUSG00000026111.16	novel	1414	6	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469261	37478061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_39576_7	chr1	+	2462	5	ISM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	11	144	4	-4	intron_retention	FALSE	canonical	3	180	junction_1	134.998148135447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469261	37478061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457
Isoform_39577_59	chr1	+	1256	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	14	144	-2	-4	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCTGTGACTGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	37469264	37478061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
Isoform_39578_22	chr1	+	1493	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-10	2	-10	-2	multi-exon	FALSE	canonical	3	65	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCCTTTTCCTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	37911276	37915307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_37911407_37913944
Isoform_39579_9	chr1_GL456212v1_random	+	210	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTATAAAACAGAAATGC	NA	False	NA	NA	False	NA	NA	NA	29066	29276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_GL456212v1_random_+_29100_29300
Isoform_39581_3	chr1	-	707	1	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	9061	4914	872	862	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGATGTTTGGTTTTTT	NA	False	NA	-14	True	AATACA	-44	NA	86278061	86277354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_86277400_86278100
Isoform_39584_3	chr1	+	2746	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCCCAAA	1539	False	NA	NA	False	NA	NA	NA	86415487	86418233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_86415500_86418200
Isoform_39597_6	chr1	-	433	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	489	-31	489	31	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	86836916	86836483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_86836500_86836900
Isoform_3960_5	chr10	+	6030	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-28	0	-26	0	multi-exon	TRUE	canonical	3	115	junction_7	22.4499443206436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	16	True	AATAAA	-16	NA	127512906	127536918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
Isoform_39600_9	chr1	-	968	1	Genic_Genomic	ENSMUSG00000042414.8	novel	NA	NA	NA	NA	-76	-12815	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13197463	13196495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_13196500_13197500
Isoform_39601_4	chr1	-	1851	1	Genic_Genomic	ENSMUSG00000042414.8	novel	NA	NA	NA	NA	-964	-12820	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTATATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13198351	13196500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_13196500_13198400
Isoform_39603_3	chr1	+	334	1	ISM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	123437	23	7112	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAATTAAATA	NA	False	NA	-16	True	NA	NA	NA	87378161	87378495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_87378200_87378500
Isoform_39604_7	chr1	+	702	1	NIC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	56	9004	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAGAAAAAAAAGAA	9426	False	NA	NA	False	NA	NA	NA	87604016	87604718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_87604000_87604700
Isoform_39606_3	chr1	+	4609	1	NIC	ENSMUSG00000026289.16	novel	749	6	NA	NA	0	-7299	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAGAAAAAAAGAA	7308	False	NA	NA	False	NA	NA	NA	87683797	87688406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_87683800_87688400
Isoform_39607_12	chr13	+	178	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7765	False	NA	NA	False	NA	NA	NA	44774386	44774564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_44774400_44774600
Isoform_39608_19	chr1	+	3509	1	Genic_Genomic	ENSMUSG00000070738.11	novel	NA	NA	NA	NA	-6	-58955	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAGAAAAAATAA	4064	False	NA	NA	False	NA	NA	NA	87781002	87784511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_+_87781000_87784500
Isoform_39609_3	chr1	-	2633	1	FSM	ENSMUSG00000005501.15	ENSMUST00000187871.2	2335	1	-318	20	3	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGGCAACTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	87936269	87933636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_87933600_87936300
Isoform_39610_5	chr1	-	2796	1	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-12	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAATGCCTC	8706	False	NA	NA	False	NA	NA	NA	88205240	88202444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_88202400_88205200
Isoform_39611_15	chr1	-	1969	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	50	1978	50	-1978	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATTGGAGGTGGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	88629893	88627924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_88627900_88629900
Isoform_39613_18	chr1	+	3066	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-34	-2	-7	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	89857948	89861014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_89857900_89861000
Isoform_39615_16	chr1	+	392	1	NIC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-3	-1794	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	90531194	90531586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_90531200_90531600
Isoform_39617_5	chr1	-	1996	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAGACAGGATCTA	NA	False	NA	NA	False	NA	NA	NA	90555271	90553275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_90553300_90555300
Isoform_39618_3	chr1	-	2176	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACAGTGGTAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	90555470	90553294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_90553300_90555500
Isoform_3962_17	chr10	+	3044	24	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1632	2	1632	-2	3prime_fragment	FALSE	canonical	2	6	junction_6	3.36837286056462	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATGCGTATTTATTTC	NA	False	NA	20	True	AATAAA	-26	NA	127542670	127556807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
Isoform_39621_3	chr1	+	2204	1	NIC	ENSMUSG00000034292.14	novel	2257	16	NA	NA	15	-31091	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCCCAGCCCAGC	8952	False	NA	NA	False	NA	NA	NA	91422383	91424587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_91422400_91424600
Isoform_39623_7	chr1	+	2576	1	FSM	ENSMUSG00000026269.15	ENSMUST00000180306.2	2556	1	-12	-8	-12	8	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	6715	False	NA	NA	False	NA	NA	NA	92838562	92841138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_92838600_92841100
Isoform_39624_3	chr1	-	1116	1	ISM	ENSMUSG00000100632.2	ENSMUST00000191563.2	1689	2	15931	18	15931	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92862381	92861265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_92861300_92862400
Isoform_39629_5	chr11	+	175	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	26244629	26244804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_26244600_26244800
Isoform_39631_5	chr1	+	246	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	322	-37	322	37	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95426667	95426913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_95426700_95426900
Isoform_39633_7	chr1	+	250	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103095246	103095496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_103095200_103095500
Isoform_39634_3	chr15	+	175	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAACTTAT	NA	False	NA	NA	False	NA	NA	NA	82719237	82719412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_82719200_82719400
Isoform_3964_17	chr10	+	715	6	ISM	ENSMUSG00000025395.15	ENSMUST00000133285.8	3128	11	-24	8134	0	-390	5prime_fragment	FALSE	canonical	3	618	junction_1	24.1876001289917	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGGGAAAGACCCCC	984	False	NA	NA	False	AAAAAG	-39	NA	127851040	127857600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541
Isoform_39640_4	chr1	-	2644	1	FSM	ENSMUSG00000025930.7	ENSMUST00000190471.2	1226	1	0	-1418	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATTGTAAAAGTT	NA	False	NA	1	True	AATAAA	-18	NA	14826216	14823572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_14823600_14826200
Isoform_39643_3	chr1	-	226	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTTAGAGCCTGAAACAT	NA	False	NA	NA	False	NA	NA	NA	111220437	111220211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_111220200_111220400
Isoform_39644_12	chr1	-	1136	1	NIC	ENSMUSG00000038702.7	novel	5759	2	NA	NA	4	316	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATTAGAAAAAAGTT	NA	False	NA	NA	False	AATATA	-5	NA	111792644	111791508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_111791500_111792600
Isoform_39646_3	chr1	-	1052	1	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	11843	3744	10413	1128	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTAGTGTGCTGCTGT	NA	False	NA	-9	True	AATAAA	-19	NA	118227303	118226251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_118226300_118227300
Isoform_39649_14	chr1	+	1186	1	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2	-15175	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAGAAATAAATGTT	NA	False	NA	NA	False	NA	NA	NA	15875878	15877064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_15875900_15877100
Isoform_39651_5	chr1	+	3998	1	NIC	ENSMUSG00000026380.11	novel	478	3	NA	NA	0	-5824	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGGAGGGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118555674	118559672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_118555700_118559700
Isoform_39652_13	chr1	-	193	1	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCTTGAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	118606798	118606605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_118606600_118606800
Isoform_39655_5	chr1	+	4004	2	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	53182	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118608857	118612898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_118609404_118609440
Isoform_39656_6	chr1	+	3912	2	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	53267	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	NA	False	NA	12	True	AATAAA	-13	NA	118608942	118612891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_118609404_118609440
Isoform_39657_4	chr1	+	3740	1	FSM	ENSMUSG00000088363.3	ENSMUST00000157738.3	130	1	-398	-3212	-398	3212	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGTGGCTGGAACCT	NA	False	NA	13	True	AATAAA	-14	NA	118609152	118612892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118609200_118612900
Isoform_39658_8	chr1	+	3650	1	FSM	ENSMUSG00000088363.3	ENSMUST00000157738.3	130	1	-302	-3218	-302	3218	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118609248	118612898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118609200_118612900
Isoform_39662_10	chr1	+	3275	1	FSM	ENSMUSG00000088363.3	ENSMUST00000157738.3	130	1	67	-3212	67	3212	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGTGGCTGGAACCT	NA	False	NA	13	True	AATAAA	-14	NA	118609617	118612892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_118609600_118612900
Isoform_39669_13	chr1	+	2701	1	ISM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	54522	0	54522	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118610197	118612898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_118610200_118612900
Isoform_3967_73	chr10	+	1531	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	48	4	24	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGATGTGCTCGGTTCT	1032	False	NA	14	True	TATAAA	-16	NA	127851088	127865902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_39680_3	chr1	-	2663	1	Genic_Genomic	ENSMUSG00000048402.15	novel	NA	NA	NA	NA	-777	-183692	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTAAATAAAC	452	False	NA	NA	False	TTTAAA	-39	NA	118982126	118979463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_118979500_118982100
Isoform_39681_3	chr1	-	780	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118983040	118982260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_118982300_118983000
Isoform_39683_4	chr1	+	1572	1	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAACTAAGCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	119233328	119234900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_+_119233300_119234900
Isoform_39684_140	chr1	+	2085	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-21	760	-21	-760	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCTGTGTGAAGATA	NA	False	NA	32	True	NA	NA	NA	119453868	119455953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_119453900_119456000
Isoform_39685_26	chr1	+	2148	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-10	686	-10	-686	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAATCCTGTCCGAGTC	NA	False	NA	106	True	NA	NA	NA	119453879	119456027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_119453900_119456000
Isoform_39688_3	chr1	-	1325	1	Genic_Genomic	ENSMUSG00000026383.15	novel	NA	NA	NA	NA	34068	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATGAGCTGTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	119474086	119472761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_119472800_119474100
Isoform_39691_4	chr1	-	3082	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	127701616	127698534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_127698500_127701600
Isoform_39692_10	chr2	-	178	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69752152	69751974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_69752000_69752200
Isoform_39694_3	chr1	+	359	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	96	-41	96	41	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	127966401	127966760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_127966400_127966800
Isoform_39695_10	chr1	+	3583	1	FSM	ENSMUSG00000056211.14	ENSMUST00000185389.2	8458	1	-14	4889	-4	-4889	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	ACTAAA	-4	NA	128031053	128034636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_128031100_128034600
Isoform_39696_4	chr1	+	1313	2	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	141	-13898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGACATG	235	False	NA	NA	False	NA	NA	NA	128172039	128173374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_128172530_128172551
Isoform_39701_53	chr1	-	383	1	FSM	ENSMUSG00000094122.2	ENSMUST00000086596.2	378	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTCATGTCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	129729506	129729123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_129729100_129729500
Isoform_39702_8	chr1	-	178	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131044163	131043985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_131044000_131044200
Isoform_39710_5	chr1	-	199	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	131913563	131913364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_131913400_131913600
Isoform_39711_3	chr1	-	174	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAAATGGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	132335385	132335211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_132335200_132335400
Isoform_39712_6	chr1	-	177	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132752721	132752544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_132752500_132752700
Isoform_39713_3	chr1	-	2655	1	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	36542	0	12547	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132916612	132913957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_132914000_132916600
Isoform_39714_3	chr1	-	2029	1	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	37167	1	13172	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132915987	132913958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_132914000_132916000
Isoform_39715_3	chr1	-	2559	1	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	36637	1	12642	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132916517	132913958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_132914000_132916500
Isoform_39716_5	chr1	-	178	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	132964018	132963840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_132963800_132964000
Isoform_39717_4	chr1	-	297	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCATAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	133049909	133049612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_133049600_133049900
Isoform_39719_4	chr1	+	179	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	133266897	133267076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_133266900_133267100
Isoform_3972_52	chr10	+	1553	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	22	8	-2	-4	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTCTGATGTGCTCGG	1006	False	NA	10	True	TATAAA	-12	NA	127851062	127865898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_39722_37	chr1	-	1955	1	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	9	-39546	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAAGAAGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	133589109	133587154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_133587200_133589100
Isoform_39724_117	chr1	+	166	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATTTAAAAAAAAAAAAA	8107	False	NA	NA	False	NA	NA	NA	134284712	134284878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_134284700_134284900
Isoform_39725_3	chr11	+	178	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCCATCA	8653	False	NA	NA	False	NA	NA	NA	4995610	4995788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_4995600_4995800
Isoform_39726_6	chr1	-	179	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGGGATGGTCAAA	NA	False	NA	NA	False	NA	NA	NA	134369560	134369381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_134369400_134369600
Isoform_39727_3	chr1	-	191	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATTAATGTTATA	1527	False	NA	NA	False	NA	NA	NA	134404105	134403914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_134403900_134404100
Isoform_3973_5	chr10	+	1370	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	204.658958406903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGATGTGCTCGGTT	1033	False	NA	12	True	TATAAA	-14	NA	127851089	127865900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_127851221_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
Isoform_39730_5	chr1	+	2276	2	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	16	-11795	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAATTAAAAACAAAGA	6654	False	NA	NA	False	AATATA	-2	NA	134422401	134424717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_+_134423326_134423365
Isoform_39731_5	chr1	+	853	1	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	71859	2403	9230	1360	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGGTCTGCAGTGTC	NA	False	NA	23	True	ATTAAA	-15	NA	134559767	134560620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_134559800_134560600
Isoform_39732_7	chr1	-	176	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135139618	135139442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_135139400_135139600
Isoform_39733_6	chr1	+	1328	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	76	-173	76	173	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTCAAAAAAAAATGTTA	4237	False	NA	NA	False	AATAAA	-10	NA	135159808	135161136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_135159800_135161100
Isoform_39734_3	chr1	+	184	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAAGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	135202773	135202957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_135202800_135203000
Isoform_39735_5	chr1	-	177	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTGGACAGAG	6919	False	NA	NA	False	NA	NA	NA	135271025	135270848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_135270800_135271000
Isoform_39736_3	chr8	+	181	1	Intergenic	novelGene_1947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	95517764	95517945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_95517800_95517900
Isoform_39738_3	chr1	-	179	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGCCGGGCGTGGTA	5879	False	NA	NA	False	NA	NA	NA	135807282	135807103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_135807100_135807300
Isoform_39740_3	chr1	+	243	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGATTTTATTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	136376020	136376263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_136376000_136376300
Isoform_39744_7	chr1	+	176	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136617185	136617361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_136617200_136617400
Isoform_39745_6	chr19	+	201	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGTTCTGGAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	3567037	3567238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_3567000_3567200
Isoform_39746_12	chr1	-	215	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTTTAAAGTAAAACT	NA	False	NA	NA	False	NA	NA	NA	138778008	138777793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_138777800_138778000
Isoform_39748_3	chr1	-	1336	1	FSM	ENSMUSG00000100954.6	ENSMUST00000186597.2	2498	1	-35	1197	-35	-1197	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151221017	151219681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_151219700_151221000
Isoform_39749_5	chr1	+	2145	1	FSM	ENSMUSG00000053286.12	ENSMUST00000186244.2	1989	1	2	-158	2	158	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304400	151306545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_151304400_151306500
Isoform_39750_3	chr1	-	202	1	Antisense	novelGene_ENSMUSG00000102633.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACCTCAGTAGGTAGC	NA	False	NA	NA	False	NA	NA	NA	21306601	21306399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_21306400_21306600
Isoform_39757_11	chr1	-	2119	2	Genic_Genomic	ENSMUSG00000026478.15	novel	7622	28	NA	NA	44	-81972	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAACAAAATTC	NA	False	NA	NA	False	NA	NA	NA	153208488	153206334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_153206793_153206827
Isoform_39758_3	chr1	+	178	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	153292359	153292537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_153292400_153292500
Isoform_39759_5	chr1	-	694	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	2	-7291	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTGTTGTCATCTACT	NA	False	NA	NA	False	AGTAAA	-4	NA	153289977	153289283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_153289300_153290000
Isoform_39761_14	chr1	-	314	1	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	31532	5	22063	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTGTGTCATTGAT	1202	False	NA	-6	True	AATAAA	-13	NA	153331822	153331508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_153331500_153331800
Isoform_39763_5	chr1	-	178	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGACATGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	153376810	153376632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_153376600_153376800
Isoform_39764_14	chr1	-	245	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAATCAGGAT	NA	False	NA	45	True	NA	NA	NA	153385458	153385213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_153385200_153385500
Isoform_39765_5	chr1	+	193	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGGCAATCATGCCAG	NA	False	NA	NA	False	NA	NA	NA	21405209	21405402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_21405200_21405400
Isoform_39766_22	chr1	-	2105	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	4	1167	4	-1167	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCACTGCCTGTTTGTA	NA	False	NA	-6	True	ATTAAA	-12	NA	154975378	154973273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_154973300_154975400
Isoform_39767_3	chr1	+	198	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGAAGTGTATTTGTAA	NA	False	NA	5	True	NA	NA	NA	155899491	155899689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_155899500_155899700
Isoform_39768_14	chr1	+	1262	1	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-9	-14691	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCGATTT	NA	False	NA	NA	False	NA	NA	NA	155911462	155912724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_155911500_155912700
Isoform_3977_3938	chr10	+	846	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	39	0	-21	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	3938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4951	False	NA	0	True	AATAAA	-24	NA	127871482	127884502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
Isoform_39770_21	chr1	-	208	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	156015666	156015458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_156015500_156015700
Isoform_39771_967	chr1	+	446	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	967	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	156193609	156194055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_156193600_156194100
Isoform_39778_81	chr1	+	2661	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	-9	-19	-9	19	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	156351572	156354233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_156351600_156354200
Isoform_39781_25	chr1	+	215	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-10	NA	22446159	22446374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_22446200_22446400
Isoform_39782_3	chr1	-	176	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	156385763	156385587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_156385600_156385800
Isoform_39783_10	chr1	-	186	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGGGA	5667	False	NA	NA	False	NA	NA	NA	156425248	156425062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_156425100_156425200
Isoform_39784_10	chr11	-	180	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTCCTT	4845	False	NA	NA	False	NA	NA	NA	20148930	20148750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_20148800_20148900
Isoform_39786_15	chr1	+	215	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTTAAGTGTTAGCCG	NA	False	NA	NA	False	ATTAAA	-6	NA	156540056	156540271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_156540100_156540300
Isoform_39787_11	chr1	+	174	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157052866	157053040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_157052900_157053000
Isoform_39788_3	chr1	-	204	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACCAAGTTTAGTTTG	NA	False	NA	NA	False	NA	NA	NA	157164156	157163952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_157164000_157164200
Isoform_39790_7	chr1	+	189	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGTTATTAAACTA	1432	False	NA	NA	False	NA	NA	NA	160046342	160046531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_160046300_160046500
Isoform_39791_6	chr1	-	217	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATTGCAAAGTTATTT	NA	False	NA	NA	False	AAAAAG	-15	NA	160750453	160750236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_160750200_160750500
Isoform_39793_34	chr1	+	3373	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2190	-1099	-2190	1099	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTGCATTTTG	NA	False	NA	21	True	ATTAAA	-17	NA	160862735	160866108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_160862700_160866100
Isoform_39794_3	chr1	-	283	1	Antisense	novelGene_ENSMUSG00000044835.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	160978837	160978554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_160978600_160978800
Isoform_39795_34	chr1	-	2559	1	FSM	ENSMUSG00000026701.16	ENSMUST00000194613.2	2558	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	161078732	161076173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_161076200_161078700
Isoform_39797_5	chr1	-	3819	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	23825272	23821453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_23821500_23825300
Isoform_39798_7	chr1	+	1029	1	ISM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	27530	11	23224	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAGTAAGCACTGT	NA	False	NA	62	True	AATAAA	-13	NA	162425613	162426642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_+_162425600_162426600
Isoform_39799_13	chr5	-	179	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	135258547	135258368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_135258400_135258500
Isoform_39801_7	chr1	+	185	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	164732312	164732497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_164732300_164732500
Isoform_39802_13	chr1	-	2216	1	NIC	ENSMUSG00000026566.16	novel	889	6	NA	NA	-1	-23877	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165462099	165459883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_165459900_165462100
Isoform_39803_3	chr1	-	293	1	FSM	ENSMUSG00000100131.2	ENSMUST00000187714.2	876	1	123	460	123	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACGCCTAAACGCAG	NA	False	NA	NA	False	NA	NA	NA	24651368	24651075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24651100_24651400
Isoform_39806_794	chr1	-	346	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	794	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTAATTAGTTTAAAAA	NA	False	NA	NA	False	AAAAAG	-20	NA	24652199	24651853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24651900_24652200
Isoform_39809_3	chr1	-	176	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	6077	False	NA	NA	False	NA	NA	NA	165942459	165942283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_165942300_165942500
Isoform_39810_4084	chrM	+	784	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4084	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	-1	True	NA	NA	False	NA	NA	NA	8607	9391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_8600_9400
Isoform_39813_85	chr1	-	594	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	191	-2	191	2	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	False	NA	NA	False	NA	NA	NA	24652861	24652267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24652300_24652900
Isoform_39815_119	chr1	-	381	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	404	-2	404	2	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	False	NA	NA	False	NA	NA	NA	24652648	24652267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24652300_24652600
Isoform_39825_1190	chrM	+	840	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	-160	1	-160	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCCACCAAACTCATGC	-10	True	NA	NA	False	AATACA	-3	NA	7766	8606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_7800_8600
Isoform_39828_46	chr1	-	478	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	202	-2	202	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCCACCAAACTCATGC	NA	False	NA	NA	False	AATACA	-3	NA	24653530	24653052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24653100_24653500
Isoform_39839_1712	chr1	-	687	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1712	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	NA	False	NA	NA	False	ACTAAA	-38	NA	24654646	24653959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24654000_24654600
Isoform_39848_62	chr1	-	495	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	67	-70	67	70	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTAGTAAAATCAATT	NA	False	NA	NA	False	NA	NA	NA	24655211	24654716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24654700_24655200
Isoform_39867_5	chr1	-	190	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAGAGGGATGAGGAG	NA	False	NA	NA	False	NA	NA	NA	167124793	167124603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_167124600_167124800
Isoform_39868_10	chr1	-	529	1	Antisense	novelGene_ENSMUSG00000052428.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	167136162	167135633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_167135600_167136200
Isoform_39869_6	chr1	-	611	1	Antisense	novelGene_ENSMUSG00000052428.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	167136244	167135633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_167135600_167136200
Isoform_39873_6	chr1	-	1556	1	NIC	ENSMUSG00000026659.14	novel	1875	5	NA	NA	22	-3210	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCGGAAACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	170713004	170711448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_170711400_170713000
Isoform_39876_4	chr1	+	172	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	171089372	171089544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_171089400_171089500
Isoform_39877_6	chr1	+	178	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	171095776	171095954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_171095800_171096000
Isoform_39878_11	chr1	+	2675	1	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	3	401	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTTACTAAGT	NA	False	NA	NA	False	NA	NA	NA	171097900	171100575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_171097900_171100600
Isoform_3988_209	chr10	+	1996	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	1	3	1	-3	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGCAGTGTCACCTTG	847	False	NA	36	True	AATAAA	-37	NA	127894823	127913138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_39880_16	chr1	+	2280	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	171139985	171142265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_171140000_171142300
Isoform_39888_3	chr1	+	175	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACAGC	4179	False	NA	NA	False	NA	NA	NA	171292254	171292429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_171292300_171292400
Isoform_39889_4	chr1	+	1201	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	74	-2	74	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGCCTTTGATGCA	1481	False	NA	NA	False	AATAAA	-13	NA	171331119	171332320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_171331100_171332300
Isoform_3989_632	chr10	+	1721	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	0	279	0	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	846	False	NA	14	True	AATAAA	-15	NA	127894822	127912862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_39894_3	chr1	+	205	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	28488031	28488236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_28488000_28488200
Isoform_39896_3	chr1	-	182	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGCACTT	NA	False	NA	NA	False	NA	NA	NA	171859700	171859518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_171859500_171859700
Isoform_39897_4	chr1	-	173	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	171959254	171959081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_171959100_171959300
Isoform_39899_51	chr1	+	2489	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	10	5055	10	-5055	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGAGCCTGTCTGTG	5460	False	NA	30	True	AATAAA	-43	NA	172204122	172206611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172204100_172206600
Isoform_3990_671	chr10	+	1661	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	60	279	3	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	906	False	NA	14	True	AATAAA	-15	NA	127894882	127912862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
Isoform_39900_3	chr1	+	2601	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	10	4943	10	-4943	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGAAGATAGGATTTTT	5460	False	NA	NA	False	AATAAA	-24	NA	172204122	172206723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_172204100_172206700
Isoform_39901_3	chr8	-	176	1	Intergenic	novelGene_1979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATCTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120646682	120646506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_120646500_120646700
Isoform_39902_3	chr1	-	181	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	4427	False	NA	NA	False	NA	NA	NA	172293571	172293390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_172293400_172293600
Isoform_39903_16	chr1	+	1341	1	NIC	ENSMUSG00000026547.16	novel	1101	2	NA	NA	34	-4233	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	172327845	172329186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_172327800_172329200
Isoform_39908_5	chr1	+	617	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	178156136	178156753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_+_178156100_178156800
Isoform_39913_3	chr1	+	173	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	6156716	6156889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_6156700_6156900
Isoform_39914_3	chr1	-	2473	1	FSM	ENSMUSG00000048874.16	ENSMUST00000185604.2	824	1	-402	-1247	17	1247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAAAAATAAAATGGA	NA	False	NA	NA	False	NA	NA	NA	30912958	30910485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_30910500_30913000
Isoform_39915_4	chr1	-	2875	1	NIC	ENSMUSG00000010609.16	novel	1997	11	NA	NA	2	-7730	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTATAGAAAAATAAAAAATA	NA	False	NA	NA	False	AAAACA	-24	NA	180083807	180080932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_180080900_180083800
Isoform_39916_3	chr1	+	171	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	4053	False	NA	NA	False	NA	NA	NA	180378992	180379163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_180379000_180379200
Isoform_39918_5	chr1	+	1063	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAGA	7144	False	NA	NA	False	NA	NA	NA	180605408	180606471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_180605400_180606500
Isoform_39921_4	chr1	-	3162	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180721988	180718826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_180718800_180722000
Isoform_39922_11	chr1	-	2320	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGTGTTTTTATTAT	NA	False	NA	NA	False	TATAAA	-7	NA	180721984	180719664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_180719700_180722000
Isoform_39926_6	chr1	-	188	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	180864736	180864548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_180864500_180864700
Isoform_39927_3	chr1	-	183	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATCCATCAGTTAG	846	False	NA	NA	False	NA	NA	NA	180946737	180946554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_180946600_180946700
Isoform_39928_4	chr1	+	424	1	Genic_Genomic	ENSMUSG00000062169.14	novel	NA	NA	NA	NA	-265	-21397	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCTCAGGGGGAAAAAACA	NA	False	NA	NA	False	ATTAAA	-38	NA	180971992	180972416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_+_180972000_180972400
Isoform_39929_4	chr1	+	182	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTTTTCTTTATTCTTT	2065	False	NA	NA	False	NA	NA	NA	181064131	181064313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181064100_181064300
Isoform_39931_5	chr1	-	199	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	177	-43	177	43	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	181069708	181069509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_181069500_181069700
Isoform_39933_3	chr1	+	2230	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAATTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	181078839	181081069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181078800_181081100
Isoform_39934_4	chr15	-	168	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80994245	80994077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_80994100_80994200
Isoform_39938_4	chr1	+	1224	1	Genic_Genomic	ENSMUSG00000047369.18	novel	NA	NA	NA	NA	1897	804	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAATCAAATGGCAAAA	NA	False	NA	NA	False	AATGAA	-34	NA	181642919	181644143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_+_181642900_181644100
Isoform_39940_3	chr1	+	175	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGTGGTTTA	NA	False	NA	NA	False	NA	NA	NA	181827636	181827811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181827600_181827800
Isoform_39941_3	chr1	-	1692	1	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	15	-62163	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCTCAAAAAAAAAAAAAAA	5658	False	NA	NA	False	NA	NA	NA	181847530	181845838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_181845800_181847500
Isoform_39942_3	chr1	-	223	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCCCAAATACACTT	6340	False	NA	NA	False	NA	NA	NA	181930886	181930663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_181930700_181930900
Isoform_39943_4	chr1	-	4267	1	NIC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	45	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	182110324	182106057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_182106100_182110300
Isoform_39944_5	chr1	-	1063	1	NIC	ENSMUSG00000047539.10	novel	4925	5	NA	NA	4	-23308	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAAAAAATTGCC	NA	False	NA	NA	False	NA	NA	NA	182169179	182168116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_182168100_182169200
Isoform_39945_4	chr1	-	196	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	182209226	182209030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_182209000_182209200
Isoform_39946_5	chr1	+	1479	1	FSM	ENSMUSG00000042901.11	ENSMUST00000192252.2	1932	1	450	3	-9	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAATCAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	183078583	183080062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_183078600_183080100
Isoform_39948_3	chr1	-	288	1	ISM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	10997	8	10997	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTGGAGGGCTGTG	8495	False	NA	-11	True	AATAAA	-20	NA	184604418	184604130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_184604100_184604400
Isoform_39951_15	chr1	+	3460	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	23	-271	23	271	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTATGGTTTTTTGTTT	NA	False	NA	5	True	NA	NA	NA	186699635	186703095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_186699600_186703100
Isoform_39952_85	chr1	+	3219	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	264	-271	264	271	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTATGGTTTTTTGTTT	NA	False	NA	5	True	NA	NA	NA	186699876	186703095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_186699900_186703100
Isoform_39955_6	chr1	+	975	1	NIC	ENSMUSG00000004768.15	novel	444	3	NA	NA	1	-2967	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCCAAATAAC	NA	False	NA	NA	False	TTTAAA	-27	NA	33758976	33759951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_33759000_33760000
Isoform_39957_82	chr1	-	521	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	-21	-119	-21	119	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATAGT	NA	False	NA	NA	False	AATAAA	-18	NA	189010041	189009520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_189009500_189010000
Isoform_39959_10	chr1	-	186	1	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	47294	1	8064	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAACAGGCTTTGATC	NA	False	NA	NA	False	NA	NA	NA	189372989	189372803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_189372800_189373000
Isoform_39960_10	chr1	-	1011	1	FSM	ENSMUSG00000026605.15	ENSMUST00000194165.2	1027	1	5	11	5	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAATAATAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	189420278	189419267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_189419300_189420300
Isoform_39961_3	chr1	+	2118	1	NIC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	4817	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189582056	189584174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_189582100_189584200
Isoform_39962_3	chr1	-	1268	1	FSM	ENSMUSG00000066595.10	ENSMUST00000191946.2	1216	1	-68	16	-34	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTTGGCAGTATTAC	NA	False	NA	NA	False	AATAAA	-12	NA	190758389	190757121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_190757100_190758400
Isoform_39963_6	chr1	+	2832	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAAAAGGAAAAAAG	3785	False	NA	NA	False	ACTAAA	-24	NA	190915654	190918486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_190915700_190918500
Isoform_39966_7	chr1	-	2439	1	FSM	ENSMUSG00000037474.14	ENSMUST00000192014.2	4693	1	-31	2285	0	-2285	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	191307656	191305217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191305200_191307700
Isoform_39968_3	chr1	-	257	1	FSM	ENSMUSG00000103653.2	ENSMUST00000195526.2	631	1	436	-62	436	62	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	191758314	191758057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_191758100_191758300
Isoform_39972_3	chr7	+	196	1	Intergenic	novelGene_1848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCACGAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	105167805	105168001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_105167800_105168000
Isoform_39973_16	chr1	-	178	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	194366960	194366782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_194366800_194367000
Isoform_39974_3	chr1	+	176	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAATTCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33888549	33888725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_33888500_33888700
Isoform_39977_4	chr1	-	619	1	NIC	ENSMUSG00000037503.13	novel	5058	8	NA	NA	0	-13753	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34882094	34881475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_34881500_34882100
Isoform_39978_3	chr1	+	178	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATGCTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	34985330	34985508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_34985300_34985500
Isoform_39979_13	chr1	+	198	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAAACGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	36019592	36019790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_36019600_36019800
Isoform_39980_6	chr11	-	224	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAAAATTGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	74609104	74608880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_74608900_74609100
Isoform_39981_35	chr1	+	217	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAACAAAGCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	36090766	36090983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_36090800_36091000
Isoform_39983_7	chr1	-	1514	1	FSM	ENSMUSG00000001143.14	ENSMUST00000193502.2	1513	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAAACATT	NA	False	NA	NA	False	NA	NA	NA	36484338	36482824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_36482800_36484300
Isoform_39984_6	chr1	+	1246	1	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	23	-70704	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAGAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	7159176	7160422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_7159200_7160400
Isoform_39990_3	chr1	+	195	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTTTTGGTAG	3773	False	NA	NA	False	NA	NA	NA	36775115	36775310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_36775100_36775300
Isoform_39991_3	chr1	-	775	1	ISM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	146550	12	17559	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	NA	False	NA	-10	True	AATAAA	-13	NA	36832058	36831283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_36831300_36832100
Isoform_39992_6	chr1	-	2141	1	NIC	ENSMUSG00000026088.16	novel	1175	8	NA	NA	8	-6330	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	37929480	37927339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_37927300_37929500
Isoform_39993_5	chr1	-	1265	1	FSM	ENSMUSG00000077704.3	ENSMUST00000104516.3	110	1	4	-1159	4	1159	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATTGTGGTTATTCA	NA	False	NA	-15	True	AATAAA	-6	NA	39587931	39586666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_39586700_39587900
Isoform_39996_5	chr1	+	176	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	43160578	43160754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_43160600_43160800
Isoform_39998_1118	chr1	+	653	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	-51	-119	-51	119	mono-exon	FALSE	NA	NA	NA	NA	NA	1118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	43228264	43228917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_43228300_43228900
Isoform_40000_9	chr15	-	176	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	81330930	81330754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_81330800_81330900
Isoform_40001_8	chr1	-	492	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAGAAAGGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	44865299	44864807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_44864800_44865300
Isoform_40002_9	chr1	+	2902	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	45596640	45599542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_45596600_45599500
Isoform_40003_3	chr1	-	176	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAATACATA	NA	False	NA	NA	False	NA	NA	NA	45708322	45708146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_45708100_45708300
Isoform_40004_4	chr1	-	176	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	47813446	47813270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_47813300_47813400
Isoform_40005_16	chr1	+	1002	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9006615	9007617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_9006600_9007600
Isoform_40007_7	chr16	-	178	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32923621	32923443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_32923400_32923600
Isoform_40009_5	chr1	-	2120	1	Genic_Genomic	ENSMUSG00000043629.13	novel	NA	NA	NA	NA	-270	-26303	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTAAAGAAAAGAA	NA	False	NA	NA	False	AAGAAA	-34	NA	52992779	52990659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_52990700_52992800
Isoform_4001_9639	chr10	+	1765	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	118	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	9639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
Isoform_40010_3	chr1	-	3415	3	NNC	ENSMUSG00000026098.14	novel	459	3	NA	NA	0	1743	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6055	False	NA	NA	False	NA	NA	NA	53336174	53332708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr1_-_53333140_53333164_53335554_53335579
Isoform_40011_3	chr4	+	184	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	156109178	156109362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_156109200_156109400
Isoform_40012_7	chr7	-	180	1	Intergenic	novelGene_1813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49211016	49210836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_49210800_49211000
Isoform_40014_3	chr1	-	3097	1	FSM	ENSMUSG00000073678.5	ENSMUST00000189506.2	3025	1	-76	4	-19	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATACAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	54596862	54593765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_54593800_54596900
Isoform_40015_10	chr1	-	177	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54926535	54926358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_54926400_54926500
Isoform_40016_3	chr1	-	172	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAACATTT	NA	False	NA	NA	False	NA	NA	NA	54987451	54987279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_54987300_54987500
Isoform_40019_110	chr1	+	2036	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	8	4	8	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTATTTGCATTATTTT	NA	False	NA	15	True	AATAAA	-15	NA	9615640	9617676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_9615600_9617700
Isoform_4002_216	chr10	+	1882	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	1	0	-1	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGGGCCTTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	127919174	127926259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
Isoform_40023_9	chr1	+	813	1	NIC	ENSMUSG00000025979.14	novel	1816	7	NA	NA	0	-13284	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCACCCACG	NA	False	NA	NA	False	NA	NA	NA	55170445	55171258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_55170400_55171300
Isoform_40024_26	chr1	+	2844	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	32	8418	32	-8418	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACAGCTGTTTGGTTA	NA	False	NA	19	True	ATTAAA	-19	NA	55276367	55279211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_55276400_55279200
Isoform_40029_3	chr1	-	175	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACAAAAAT	NA	False	NA	NA	False	NA	NA	NA	57443106	57442931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_57442900_57443100
Isoform_40030_3	chr1	-	1288	1	NIC	ENSMUSG00000048495.17	novel	1847	8	NA	NA	9	-11990	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAACAAACAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	57445621	57444333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_57444300_57445600
Isoform_40031_3	chr1	-	854	1	NIC	ENSMUSG00000054770.17	novel	2114	4	NA	NA	-5	-5602	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	58009216	58008362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_58008400_58009200
Isoform_40032_11	chr1	-	210	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCCAGTGGTATTC	NA	False	NA	NA	False	NA	NA	NA	58189413	58189203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_58189200_58189400
Isoform_40035_5	chr11	-	183	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7040	False	NA	NA	False	NA	NA	NA	19918464	19918281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_19918300_19918500
Isoform_40036_5	chr1	+	197	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	3098	546	3098	-546	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGATGGAGTTAGGAAT	8431	False	NA	NA	False	NA	NA	NA	58840039	58840236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_58840000_58840200
Isoform_4004_217	chr10	+	1807	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	-9	118	-9	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919132	127926142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
Isoform_40042_3	chr1	-	2992	1	Antisense	novelGene_ENSMUSG00000041075.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATACAGTCTTCAAG	NA	False	NA	NA	False	AATAAA	-28	NA	59522545	59519553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_59519600_59522500
Isoform_40043_23	chr1	+	4852	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-327	7	-327	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAAGTGAATGTT	5027	False	NA	NA	False	AATAAA	-8	NA	59521255	59526107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_59521300_59526100
Isoform_40045_3	chr2	+	174	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26783280	26783454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_26783300_26783500
Isoform_40046_4	chr1	-	208	1	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGGCAGTCTATAGCCT	NA	False	NA	NA	False	NA	NA	NA	59734666	59734458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_59734500_59734700
Isoform_40048_3	chr1	-	182	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	60059714	60059532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_60059500_60059700
Isoform_40050_3	chr1	+	1083	1	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-4	-11520	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	9978888	9979971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_9978900_9980000
Isoform_40051_16	chr1	-	2093	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1569	-437	-1569	437	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014343	10012250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_10012200_10014300
Isoform_40052_2108	chr1	+	1779	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-14	-547	-14	547	mono-exon	FALSE	NA	NA	NA	NA	NA	2108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	98	True	AATAAA	-19	NA	60743076	60744855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_+_60743100_60744900
Isoform_40075_29	chr1	+	209	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGAAGAATTTTTTTC	NA	False	NA	7	True	NA	NA	NA	10055084	10055293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_10055100_10055300
Isoform_40076_7	chr1	-	257	1	ISM	ENSMUSG00000040865.16	ENSMUST00000097718.9	13675	11	7	66603	7	-52240	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153819	63153562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_63153600_63153800
Isoform_40077_3	chr1	-	368	1	Genic_Genomic	ENSMUSG00000040865.16	novel	NA	NA	NA	NA	-103	-52239	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153929	63153561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_63153600_63153900
Isoform_40079_4	chr1	+	2019	1	NIC	ENSMUSG00000086730.3	novel	462	2	NA	NA	-108	-4996	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63239758	63241777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_63239800_63241800
Isoform_40080_5	chr1	+	217	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCATTTTTCCCTAAAA	27	False	NA	NA	False	AAAAAG	-20	NA	63273243	63273460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_63273200_63273500
Isoform_40081_632	chr1	-	712	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	-26	-32	-26	32	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	65033789	65033077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_65033100_65033800
Isoform_40082_3	chr1	+	358	1	Antisense	novelGene_ENSMUSG00000084416.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATCGTACTTCTTAGCC	3243	False	NA	NA	False	NA	NA	NA	65033077	65033435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_+_65033100_65033400
Isoform_40089_4	chr1	-	1037	1	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	3	-10144	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAAATCTTTTCTT	NA	False	NA	NA	False	CATAAA	-28	NA	65225635	65224598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_-_65224600_65225600
Isoform_40090_4	chr1	-	1169	1	Genic_Genomic	ENSMUSG00000026000.17	novel	NA	NA	NA	NA	-14	-18109	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67078045	67076876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_67076900_67078000
Isoform_40095_4	chr1	+	1986	1	NIC	ENSMUSG00000073652.11	novel	826	3	NA	NA	8	-2415	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACACACACAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	71692003	71693989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_71692000_71694000
Isoform_40100_5	chr1	-	175	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	74213194	74213019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_74213000_74213200
Isoform_40101_5	chr11	+	175	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAAAAAAATTGAAAATA	NA	False	NA	NA	False	NA	NA	NA	102484216	102484391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_102484200_102484400
Isoform_40102_5	chr1	-	473	1	Antisense	novelGene_ENSMUSG00000103403.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAACAAAAAAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	74347266	74346793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr1_-_74346800_74347300
Isoform_40104_3	chr1	-	2280	1	ISM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	68011	2	29782	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74476951	74474671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_74474700_74477000
Isoform_40107_7	chr1	+	382	1	NIC	ENSMUSG00000026172.13	novel	1488	8	NA	NA	18	-2209	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1160	False	NA	NA	False	AAAAAG	-7	NA	74627476	74627858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_74627500_74627900
Isoform_40109_7	chr1	-	208	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74858474	74858266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_74858300_74858500
Isoform_40110_9	chr17	+	497	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGGTTTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	32588586	32589083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_32588600_32589100
Isoform_40111_5	chr1	+	2737	1	NIC	ENSMUSG00000049339.17	novel	2477	9	NA	NA	0	-231	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	75119437	75122174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr1_+_75119400_75122200
Isoform_40112_4	chr1	-	1031	1	ISM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	146873	0	9392	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	NA	False	NA	-3	True	AATAAA	-23	NA	77344852	77343821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_77343800_77344900
Isoform_40113_3	chr1	-	1376	1	ISM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	146522	6	9041	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAAATCTGGTTGTCT	NA	False	NA	-9	True	AATAAA	-17	NA	77345203	77343827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr1_-_77343800_77345200
Isoform_40115_3	chr1	-	175	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGAAAGGACA	9560	False	NA	NA	False	NA	NA	NA	82801048	82800873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_82800900_82801000
Isoform_40116_3	chr1	-	1398	1	FSM	ENSMUSG00000045658.17	ENSMUST00000187992.2	1431	1	31	2	19	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	493	False	NA	NA	False	NA	NA	NA	84262313	84260915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_84260900_84262300
Isoform_40117_6	chr1	-	179	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAATAGTTCTCT	8624	False	NA	NA	False	NA	NA	NA	84883281	84883102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_84883100_84883300
Isoform_40118_4	chr1	-	2785	1	Genic_Genomic	ENSMUSG00000026220.7	novel	NA	NA	NA	NA	-72	-3088	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84912927	84910142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_-_84910100_84912900
Isoform_40119_8	chr1	-	283	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	84939271	84938988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_84939000_84939300
Isoform_40123_75	chr2	-	1027	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	15	0	15	0	multi-exon	FALSE	canonical	3	304	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2332	False	NA	-15	True	AATAAA	-18	NA	3333665	3329985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3330911_3333563
Isoform_40129_36	chr2	-	2601	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-39	1765	-39	0	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476107	3458616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
Isoform_40131_6	chr2	-	4369	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-46	4	-46	-4	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTCCTGTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-12	NA	3476114	3456855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
Isoform_40137_19	chr2	-	2462	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-108	-23	-46	0	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476114	3458616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
Isoform_40142_4	chr2	-	1202	3	ISM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-42	8427	-42	-6639	5prime_fragment	FALSE	canonical	3	149	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTGTACTTTCTAAC	NA	False	NA	-1	True	ATTAAA	-16	NA	3476110	3465278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_3465964_3473538_3473685_3475739
Isoform_40144_977	chr2	-	1753	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	39	3	-32	-3	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGAGTCTTTGTTTT	3981	False	NA	-8	True	ATTAAA	-17	NA	3513812	3489889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
Isoform_40145_118	chr2	-	1783	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	9	3	9	-3	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGGAGTCTTTGTTTT	3951	False	NA	-8	True	ATTAAA	-17	NA	3513842	3489889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
Isoform_40157_12	chr2	-	3546	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-30	6	-3	-6	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACAGGTGCTGCTT	NA	False	NA	92	True	AGTAAA	-17	NA	4656927	4626874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
Isoform_40158_24	chr2	-	3446	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-24	100	3	-100	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGACTGTGTCCGTTTC	NA	False	NA	-2	True	TTTAAA	-34	NA	4656921	4626968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
Isoform_40162_185	chr2	-	3425	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	69	0	-7	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017533	4995534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
Isoform_40163_148	chr2	-	3456	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	38	0	0	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017564	4995534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
Isoform_40173_13	chr2	-	2554	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	-143	0	-30	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTATCTGATTTA	NA	False	NA	-2	True	AGTAAA	-15	NA	5068892	5025454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_40177_42	chr2	-	2635	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-21	0	-15	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068877	5025452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_40178_3	chr2	-	1438	7	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-20	15652	-14	9863	5prime_fragment	FALSE	canonical	3	74	junction_6	40.7635458058627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	5068876	5041104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
Isoform_40181_3	chr2	-	1414	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	39	-158	39	158	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATGGACCTTCTTGCT	1216	False	NA	NA	False	NA	NA	NA	5680818	5303539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
Isoform_40182_5	chr2	-	3009	2	ISM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	40	263978	40	2621	5prime_fragment	FALSE	canonical	3	45	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGAGG	1217	False	NA	NA	False	NA	NA	NA	5680817	5567675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_5570592_5680724
Isoform_40184_505	chr2	-	1246	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	205	376	-18	-5	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGGAAGCCTACTGT	NA	False	NA	-12	True	AATAAA	-10	NA	5849770	5799480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
Isoform_40185_50	chr2	-	1213	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-18	-5	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGGAAGCCTACTGT	NA	False	NA	-12	True	AATAAA	-10	NA	5849770	5799480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
Isoform_40190_22	chr2	-	1020	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCATCATTGCTTTTT	NA	False	NA	1	True	AATACA	-17	NA	5849787	5814366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
Isoform_40193_3	chr2	-	2204	11	NIC	ENSMUSG00000025816.16	novel	2110	11	NA	NA	0	4	combination_of_known_splicesites	TRUE	canonical	3	8	junction_3	114.611517745818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900145	5875793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881170_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_40195_89	chr2	-	2400	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	52	-4	-46	4	multi-exon	FALSE	canonical	3	221	junction_3	37.3630833845388	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900191	5875793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_40197_6	chr2	-	2193	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-31	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	84.6070919013294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCTCTAAGAGTATTT	NA	False	NA	-13	True	AATAAA	-14	NA	5900176	5875793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_5876833_5878553_5878631_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_40198_14	chr2	-	1353	6	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-61	3952	-46	1	5prime_fragment	FALSE	canonical	3	245	junction_1	28.7193314685422	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5900191	5886617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
Isoform_40199_10	chr2	-	3412	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	11	2057	11	-994	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTATGGTCG	NA	False	NA	NA	False	AGTAAA	-15	NA	5947592	5902982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
Isoform_40200_6	chr2	-	2283	4	ISM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	20	-1146	20	-19	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134930	6104854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
Isoform_40201_10	chr2	-	2107	5	FSM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	-16	-1146	-9	-19	multi-exon	FALSE	canonical	0	0	junction_3	17.007351351695	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134966	6104854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438_6134641_6134852
Isoform_40202_18	chr2	-	2030	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	12	19	5	-19	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134945	6104854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
Isoform_40203_27	chr2	-	1956	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	5	2437	5	-19	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6135017	6104854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
Isoform_40204_44	chr2	-	1909	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	52	2437	-13	-19	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134970	6104854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
Isoform_40205_12	chr2	-	2325	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-13	36687	-13	-35161	5prime_fragment	FALSE	canonical	3	137	junction_1	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	10053420	9956049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_9957757_10047237_10047481_10053045
Isoform_40216_2539	chr2	-	1088	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	75	3	-8	-3	multi-exon	TRUE	canonical	3	3857	junction_2	289.314942238504	2539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGTCTCATTATTAAT	9579	False	NA	-5	True	AATAAA	-16	NA	10085246	10060843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
Isoform_40217_356	chr2	-	1147	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	16	3	16	-3	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGTCTCATTATTAAT	9520	False	NA	-5	True	AATAAA	-16	NA	10085305	10060843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
Isoform_40227_6	chr2	-	4613	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	26	-5	0	3	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGACTCGCTTCTCAGGTT	6334	False	NA	0	True	AATAAA	-22	NA	11506886	11476631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
Isoform_40228_11	chr2	-	4573	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	63	-2	-21	0	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGGACTCGCTTCTCAG	6371	False	NA	-3	True	AATAAA	-19	NA	11506849	11476634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
Isoform_40229_4	chr2	-	4452	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	-46	395	-46	0	multi-exon	FALSE	canonical	3	18	junction_2	9.7969174660571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCGGGACTCGCTTC	NA	False	NA	-7	True	AATAAA	-15	NA	11558934	11476638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
Isoform_40230_5	chr2	-	4385	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	24	392	24	-1	multi-exon	FALSE	canonical	3	18	junction_2	9.7969174660571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	NA	False	NA	-4	True	AATAAA	-18	NA	11558864	11476635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
Isoform_40231_347	chr2	-	1558	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	33	8	33	-4	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTCTCTGG	NA	False	NA	-32	True	TATAAA	-10	NA	11608040	11590255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
Isoform_40236_10	chr2	-	3617	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	40	junction_19	66.9909695406776	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782387	11747383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782214
Isoform_40237_11	chr2	-	3559	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_19	58.1895824009762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782359	11747385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
Isoform_40239_62	chr2	-	3538	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-16	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782334	11747383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
Isoform_40240_41	chr2	-	3566	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782362	11747383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
Isoform_40242_188	chr2	-	3538	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	31	-2	-1	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782362	11747383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
Isoform_40244_59	chr2	-	2058	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	29	257	0	112	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGTGGGAACTTCTAT	NA	False	NA	-2	True	AATAAA	-23	NA	12424252	12352330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
Isoform_40246_13	chr2	-	2304	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	39	1	0	-1	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12424242	12352074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
Isoform_40248_4	chr2	-	1455	8	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-8	105	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	51.1843407175855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTACTATGTGGGAA	NA	False	NA	-9	True	AATAAA	-16	NA	12424289	12352337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
Isoform_40250_122	chr2	-	1481	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	110	-45	3	45	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGTGCACATTTTTT	7153	False	NA	0	True	AATAAA	-15	NA	13276116	13081777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
Isoform_40252_8	chr2	-	1620	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	-29	-45	-29	45	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGTGCACATTTTTT	7014	False	NA	0	True	AATAAA	-15	NA	13276255	13081777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
Isoform_40254_5	chr2	-	1437	8	FSM	ENSMUSG00000026727.11	ENSMUST00000114791.9	1604	8	18	149	-4	42	multi-exon	FALSE	canonical	2	5	junction_6	120.515389820858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGGGTGTGCACATTT	7143	False	NA	-3	True	AATAAA	-12	NA	13276126	13081780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13275721_13275834_13276010
Isoform_40255_7	chr2	-	2147	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	185	5286	185	847	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGCCTGCTTCTGAT	NA	False	NA	NA	False	AAGAAA	-16	NA	13798690	13661117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_40259_5	chr2	-	3591	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	109	3918	109	2215	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13798766	13659749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_40260_27	chr2	-	3481	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	219	3918	219	2215	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13798656	13659749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_40261_5	chr2	-	3500	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	106	4012	106	2121	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGAGGCTCTTTTATGC	NA	False	NA	NA	False	AATAAA	-26	NA	13798769	13659843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
Isoform_40263_10	chr2	-	866	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	-2	7	-2	-7	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGGATTGCATTGT	NA	False	NA	-9	True	AATAAA	-12	NA	14060833	14031648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
Isoform_40264_23	chr2	-	827	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	37	7	37	-7	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGGATTGCATTGT	NA	False	NA	-9	True	AATAAA	-12	NA	14060794	14031648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
Isoform_40266_3	chr2	-	2528	5	ISM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-29	41303	3	1	5prime_fragment	FALSE	canonical	3	61	junction_4	7.69334127671456	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCTTATATTTGATGA	949	False	NA	NA	False	AATAAA	-18	NA	15054120	15041244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
Isoform_40270_3	chr2	-	3452	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAGCCTACTTTGC	NA	False	NA	-24	True	ATTAAA	-16	NA	18033637	18030004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_18033050_18033230
Isoform_40272_3	chr2	-	3273	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	112	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATAGCCTACTTTG	NA	False	NA	-25	True	ATTAAA	-15	NA	18033459	18030005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_18033050_18033230
Isoform_40273_10	chr2	-	2098	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	6	3393	0	-7	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	18397635	18221952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
Isoform_40278_15	chr2	-	3651	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-174	0	-174	0	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19003111	18847065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
Isoform_40281_9	chr2	-	3094	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	12	297	1	-1	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATTTGGATATTGTTA	NA	False	NA	-8	True	AATAAA	-15	NA	22930241	22830381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40283_3	chr2	-	3318	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	73	12	17	1	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGTTGAAATTATTTCT	NA	False	NA	-21	True	AATAAA	-13	NA	22930180	22830096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40286_10	chr2	-	3041	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	67	295	11	1	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTGGATATTGTTAAA	NA	False	NA	-6	True	AATAAA	-17	NA	22930186	22830379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40289_5	chr2	-	3267	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	91	2	0	-2	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTCTTAAAATGATT	NA	False	NA	-11	True	AATAAA	-23	NA	22930116	22830086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40290_28	chr2	-	3055	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	8	297	0	-1	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATTTGGATATTGTTA	NA	False	NA	-8	True	AATAAA	-15	NA	22930199	22830381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40292_5	chr2	-	3392	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-34	2	1	-2	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTCTTAAAATGATT	NA	False	NA	-11	True	AATAAA	-23	NA	22930241	22830086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40294_5	chr2	-	2096	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	102.292396467186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTTTGGCCTCTCCTT	NA	False	NA	-4	True	TATAAA	-32	NA	22930189	22831243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
Isoform_40295_12	chr2	-	2922	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	131	2537	4	-2537	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAGGGAGTGAGCCG	NA	False	NA	-27	True	AATAAA	-18	NA	23045905	23008154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_40298_4	chr2	-	4519	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	130	941	3	-941	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTGCAGCAGTGTTGT	NA	False	NA	NA	False	AAAAAG	-30	NA	23045906	23006558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_40299_5	chr2	-	1228	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-24	-3	-24	3	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATACTGGTCT	NA	False	NA	NA	False	TATAAA	-19	NA	23045933	23026692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_40300_4	chr2	-	1183	4	ISM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-10	8093	-10	-8093	5prime_fragment	FALSE	canonical	3	131	junction_1	17.2497987105808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGAGAGAGAGA	NA	False	NA	NA	False	CATAAA	-15	NA	23045919	23034788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_23035465_23036053_23036194_23040999_23041138_23045690
Isoform_40301_4	chr2	-	2286	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-107	-663	-7	65	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTTATAATGACTTAC	NA	False	NA	NA	False	AATAAA	-27	NA	23462097	23400618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_40302_5	chr2	-	2733	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	30	3832	4	620	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTAGTTGATCACTCATC	NA	False	NA	NA	False	AATAAA	-17	NA	23462086	23400063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_40303_7	chr2	-	2186	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	28	4381	2	71	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAATGACTTACATTTGA	NA	False	NA	NA	False	AATAAA	-33	NA	23462088	23400612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_40304_4	chr2	-	1078	7	ISM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-100	26162	0	5811	5prime_fragment	FALSE	canonical	3	30	junction_2	7.19760762722973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTAAATCTGAGCAT	NA	False	NA	NA	False	AATAAA	-6	NA	23462090	23427443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
Isoform_40305_3	chr2	-	4690	27	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	60.9931124252043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTGTAAAAAAAAAAAAAGA	9593	False	NA	NA	False	AATAAA	-7	NA	24809623	24681172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_40306_3	chr2	-	5066	27	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	2	16	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	60.9931124252043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGGAGTTTTCATTA	9599	False	NA	-9	True	AATAAA	-11	NA	24809617	24680790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_40307_5	chr2	-	5085	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	3	26	combination_of_known_junctions	TRUE	canonical	3	18	junction_23	52.763749995707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9593	False	NA	1	True	AATAAA	-21	NA	24809623	24680780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_40308_7	chr2	-	4701	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	52.763749995707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	9591	False	NA	NA	False	AATAAA	-13	NA	24809625	24681166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_4031_3	chr10	+	2596	14	NNC	ENSMUSG00000040054.18	novel	8443	30	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	120.361732895311	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCGAGAAAAGAAAGAAAA	NA	False	NA	24	True	NA	NA	NA	127927481	127955189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127927646_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138
Isoform_40311_7	chr2	-	5077	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-24	-438	3	18	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAGTTTTCATTATG	9593	False	NA	-7	True	AATAAA	-13	NA	24809623	24680788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_40312_13	chr2	-	4693	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-18	-60	2	2	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	9599	False	NA	NA	False	AATAAA	-13	NA	24809617	24681166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_40313_17	chr2	-	4690	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-10	0	-3	0	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	9603	False	NA	NA	False	AATAAA	-11	NA	24809613	24681168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_40314_6	chr2	-	5068	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-6	-382	1	20	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9607	False	NA	-5	True	AATAAA	-15	NA	24809609	24680786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_40318_3	chr2	-	5082	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	16	855	0	12	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTAAATGGAGTTTTC	9606	False	NA	-13	True	AATAAA	-7	NA	24809610	24680794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_40322_5	chr2	-	873	4	ISM	ENSMUSG00000036893.18	ENSMUST00000152161.8	1121	6	-26	14159	-19	-13562	5prime_fragment	FALSE	canonical	3	73	junction_3	91.3977874762598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCTGGTCAACCATCG	9571	False	NA	NA	False	NA	NA	NA	24809645	24767466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_24767639_24774157_24774715_24777014_24777079_24809565
Isoform_40323_17	chr2	-	830	4	ISM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	4	86298	0	-13562	5prime_fragment	FALSE	canonical	3	178	junction_3	43.2075096353503	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCTGGTCAACCATCG	9617	False	NA	NA	False	NA	NA	NA	24809599	24767466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_24767639_24774157_24774715_24777014_24777082_24809565
Isoform_40324_19	chr2	-	1592	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	74	0	-4	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9391	False	NA	-31	True	AATAAA	-17	NA	24825190	24815363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
Isoform_40325_5	chr2	-	1520	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	24.8445164976097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCGAGTGGCTGGC	9350	False	NA	-33	True	AATAAA	-15	NA	24825231	24815365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24825039
Isoform_40326_7	chr2	-	1706	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-27	0	intron_retention	FALSE	canonical	3	75	junction_2	4.41273409829124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9354	False	NA	-31	True	AATAAA	-17	NA	24825227	24815363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
Isoform_40327_3	chr2	-	2340	5	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	76	junction_4	3.96074487943871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9368	False	NA	-31	True	AATAAA	-17	NA	24825213	24815363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24815689_24815767_24816740_24816889_24817045_24817137_24817852_24825039
Isoform_40328_219	chr2	-	718	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	56	2	-53	-2	multi-exon	FALSE	canonical	3	317	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	-5	True	ATTAAA	-19	NA	24865054	24864130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_24864694_24864899
Isoform_40329_27	chr2	-	2996	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	259	0	132	0	multi-exon	FALSE	canonical	3	13	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	8521	False	NA	NA	False	AATAAA	-17	NA	25086639	25082977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25085938_25086603
Isoform_4033_3	chr10	+	4166	9	ISM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	30995	7	27398	-6	3prime_fragment	FALSE	canonical	3	377	junction_6	78.4996019098186	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGACTCAAGATTGCAT	NA	False	NA	-7	True	AATAAA	-13	NA	127959646	127965165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
Isoform_40332_545	chr2	-	2506	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	125	6	17	-2	multi-exon	TRUE	canonical	3	539	junction_7	54.5501807716732	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATGGTGAGGAATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	25101376	25089729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
Isoform_40338_187	chr2	-	1470	3	ISM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	425	4	377	-4	3prime_fragment	FALSE	canonical	3	1343	junction_2	31.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCGCCTGTCCAAT	NA	False	NA	-28	True	ATTAAA	-14	NA	25114289	25112175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25113381_25113945_25114057_25114135
Isoform_4034_4	chr10	+	3558	6	ISM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	32201	5	28604	-4	3prime_fragment	FALSE	canonical	3	377	junction_3	88.6760396048448	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTCAAGATTGCATGT	NA	False	NA	-5	True	AATAAA	-15	NA	127960852	127965167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
Isoform_40341_3830	chr2	-	1550	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	45	3	-3	-3	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	3830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCGCCTGTCCAATT	NA	False	NA	-27	True	ATTAAA	-15	NA	25114669	25112174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
Isoform_40348_63	chr2	-	2310	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	26	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145395	25137240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_40349_10	chr2	-	4746	14	FSM	ENSMUSG00000115018.3_ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	3	-2413	3	3	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCTGCCATCCTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	25145418	25134827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
Isoform_4035_113	chr10	+	2421	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	151	1	-29	-1	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030476	128045807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_40350_12	chr2	-	2386	14	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	48.1394670101744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145385	25137240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
Isoform_40351_57	chr2	-	1023	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	27	-44	-1	-3	multi-exon	FALSE	canonical	3	843	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTCTGCTAGCTA	NA	False	NA	-9	True	AATAAA	-13	NA	25162423	25161053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25161594_25161940
Isoform_40355_491	chr2	-	858	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	4	0	-2	0	multi-exon	FALSE	canonical	3	707	junction_2	68	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162424	25161050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25161594_25161940_25162141_25162309
Isoform_40358_21	chr2	-	846	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	-2	1	-2	-1	multi-exon	FALSE	canonical	3	46	junction_2	398.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTGCTAGCTACC	NA	False	NA	-7	True	AATAAA	-15	NA	25162424	25161051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25161594_25161940_25162141_25162320
Isoform_40359_4	chr2	-	3251	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7584	-4	-6114	4	3prime_fragment	FALSE	canonical	0	0	junction_1	7.78428903043448	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTTTGTCTATTGTTGA	9878	False	NA	0	True	NA	NA	NA	25201523	25181188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25182141_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_4036_7	chr10	+	2592	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.0851081808844	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030550	128045807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_128030939_128030966_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_40360_12	chr2	-	3138	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114317.10	3809	20	7584	-2	-6114	2	3prime_fragment	FALSE	canonical	3	13	junction_1	5.11699069278028	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTTTGTCTATTGTT	9878	False	NA	-2	True	NA	NA	NA	25201523	25181190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_40361_11	chr2	-	3618	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114310.10	4276	21	7564	5	-6134	-5	3prime_fragment	FALSE	canonical	2	8	junction_2	6.39852924277042	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTTCCGGGTTTTGTC	9858	False	NA	-9	True	NA	NA	NA	25201543	25181197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_40362_4	chr2	-	3487	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114308.10	4165	20	7584	5	-6114	-5	3prime_fragment	FALSE	canonical	1	3	junction_1	6.67990222608086	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTTCCGGGTTTTGTC	9878	False	NA	-9	True	NA	NA	NA	25201523	25181197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25182497_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_40363_3	chr2	-	2640	16	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7584	4159	-6114	-3282	internal_fragment	FALSE	canonical	3	19	junction_2	4.55289895439037	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGTGTGGATTTGTGGT	9878	False	NA	NA	False	NA	NA	NA	25201523	25185351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_40364_4	chr2	-	1832	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7586	11507	-6112	793	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	9880	False	NA	NA	False	NA	NA	NA	25201521	25192699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
Isoform_40365_3	chr2	-	1765	12	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	3	2	3	-2	intron_retention	FALSE	canonical	3	250	junction_10	27.0884684684635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9004	False	NA	-19	True	AATAAA	-15	NA	25246368	25242303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040
Isoform_40366_108	chr2	-	1676	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	6	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9007	False	NA	-17	True	AATAAA	-17	NA	25246365	25242301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
Isoform_40367_12	chr2	-	1708	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-23	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	144.070241115228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGGACTCTGATTGTC	NA	False	NA	-25	True	NA	NA	NA	25255650	25251510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25251752_25252082_25252150_25252661_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_4037_6	chr10	+	2675	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-38	-1	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_1	27.8856239788777	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATTTTTATTTTATA	NA	False	NA	9	True	AATAAA	-15	NA	128030467	128045807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_128030962_128030989_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
Isoform_40370_449	chr2	-	1684	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	56	1609	-11	-4	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGACTCTGATTGTCT	NA	False	NA	-24	True	NA	NA	NA	25255638	25251509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_40371_11	chr2	-	1948	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	31	-3	intron_retention	FALSE	canonical	3	362	junction_3	38.6892380754279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCTGATTGTCTG	NA	False	NA	-23	True	NA	NA	NA	25255663	25251508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254700_25254892_25255098_25255338
Isoform_40373_27	chr2	-	1618	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	144.900342908497	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGATTGTCTGT	NA	False	NA	-22	True	NA	NA	NA	25255638	25251507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253323_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_40376_17	chr2	-	1544	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	159.624303811628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCTGATTGTCTG	NA	False	NA	-23	True	NA	NA	NA	25255638	25251508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_40377_13	chr2	-	2077	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	414	junction_3	22.9889059313045	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGACTCTGATTGTCT	NA	False	NA	-24	True	NA	NA	NA	25255636	25251509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
Isoform_4038_183	chr10	+	1741	13	ISM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-9	8023	0	899	5prime_fragment	FALSE	canonical	3	289	junction_8	43.2845879679541	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGGGCAGCCCCAAGGT	6606	False	NA	18	True	NA	NA	NA	128067948	128080698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528
Isoform_40383_7	chr2	-	928	6	FSM	ENSMUSG00000047617.12	ENSMUST00000125710.8	917	6	38	-49	-5	0	multi-exon	FALSE	canonical	3	10	junction_3	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTGTGAAGATTGGC	5360	False	NA	-4	True	AATAAA	-32	NA	25350982	25349493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666
Isoform_40384_3	chr2	-	838	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	142	1	0	-1	multi-exon	FALSE	canonical	3	6	junction_6	3.94405318873308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGTTGTGAAGATTGG	5378	False	NA	-5	True	AATAAA	-31	NA	25350964	25349494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
Isoform_40385_12	chr2	-	1217	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	-67	0	-67	0	multi-exon	FALSE	canonical	3	9	junction_1	2.38047614284762	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTCGTTTTTTGTC	NA	False	NA	-1	True	ATTAAA	-19	NA	25390692	25388662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
Isoform_40387_17	chr2	-	2137	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	22	-8	22	8	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTCATCTGGCTCCT	NA	False	NA	-10	True	ATTAAA	-21	NA	25436900	25408869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
Isoform_40389_163	chr2	-	2108	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	52	884	22	0	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436900	25408877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
Isoform_40390_14	chr2	-	2156	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	4	884	4	0	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436948	25408877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
Isoform_40392_73	chr2	-	603	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	333	1	-13	-1	multi-exon	FALSE	canonical	3	774	junction_2	2.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTGACTTGTGTCTTG	5533	False	NA	-9	True	ATTAAA	-19	NA	25464903	25463442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25463712_25464199_25464325_25464694
Isoform_40393_4	chr2	-	755	3	FSM	ENSMUSG00000036504.7	ENSMUST00000147096.2	656	3	-27	-72	-27	0	multi-exon	FALSE	canonical	3	48	junction_2	365.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5519	False	NA	-8	True	ATTAAA	-20	NA	25464917	25463441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25463712_25464199_25464462_25464694
Isoform_40395_260	chr2	-	3174	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	56	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3274	False	NA	-6	True	CATAAA	-15	NA	25498477	25473029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
Isoform_40406_6	chr2	-	761	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	0	34	0	3	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCTCTGAAGCAATTAA	NA	False	NA	-3	True	AATAAA	-21	NA	25512017	25510112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
Isoform_40407_4	chr2	-	5552	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	1	531	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAGAAAAAAAA	NA	False	NA	-114	True	NA	NA	NA	25873219	25819206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
Isoform_40411_1303	chr2	-	1844	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	0	8	0	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911751	25888554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_40412_25	chr2	-	2065	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	-221	8	221	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCATGGCTACTTCTTC	NA	False	NA	NA	False	NA	NA	NA	25911751	25888333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_40419_96	chr2	-	1705	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911751	25888554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
Isoform_4042_40	chr10	+	4434	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	15	8	0	1	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6606	False	NA	12	True	AATAAA	-42	NA	128067948	128088802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_40427_3	chr2	-	2815	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	2055	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	8907	False	NA	NA	False	NA	NA	NA	26012822	25949020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
Isoform_40428_54	chr2	-	2920	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-14	3472	-14	2057	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8885	False	NA	NA	False	NA	NA	NA	26012844	25949018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
Isoform_40430_6	chr2	-	2980	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-74	3472	-74	2057	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8825	False	NA	NA	False	NA	NA	NA	26012904	25949018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
Isoform_40432_5	chr2	-	2971	6	NNC	ENSMUSG00000026932.15	novel	6675	6	NA	NA	11574	2056	intron_retention	FALSE	canonical	1	2	junction_5	16.6685332288117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4103	False	NA	NA	False	NA	NA	NA	26001221	25949019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26001025
Isoform_40434_114	chr2	-	2457	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	26	0	26	0	multi-exon	FALSE	canonical	3	70	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030507	26026825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26028926_26030150
Isoform_40436_19	chr2	-	2390	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	164	5	164	-5	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127373	26099141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_40438_56	chr2	-	3870	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	164	-5	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127373	26099141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_4044_26	chr10	+	4430	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-9	-80	0	0	multi-exon	FALSE	canonical	3	180	junction_28	54.1443059549842	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
Isoform_40441_8	chr2	-	3938	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	96	-5	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127441	26099141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_40443_3	chr2	-	3042	12	ISM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	-57	1054	-57	-1054	5prime_fragment	FALSE	canonical	3	117	junction_2	7.1269480445526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAAACTTGTGCCTAAA	NA	False	NA	-5	True	AATACA	-18	NA	26127594	26100190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
Isoform_40444_21	chr2	-	2933	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	20	-37	10	37	multi-exon	FALSE	canonical	3	313	junction_2	24.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTAGTATCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	26242102	26238095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26240571_26241346_26241487_26241784
Isoform_40445_28	chr2	-	726	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	20	2170	10	-2170	multi-exon	FALSE	canonical	3	313	junction_2	24.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	-19	True	AGTAAA	-20	NA	26242102	26240302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26240571_26241346_26241487_26241784
Isoform_40448_11	chr2	-	722	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	15	-2173	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGGGCCTGGGCTCCTG	NA	False	NA	-22	True	AGTAAA	-17	NA	26242097	26240305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_26240571_26241346_26241491_26241784
Isoform_40449_4	chr2	-	2884	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGCGGGGCGGCCACC	NA	False	NA	NA	False	AATAAA	-16	NA	26242088	26238134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_26240571_26241346_26241491_26241784
Isoform_4045_24	chr10	+	4431	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105242.8	4385	29	-54	8	0	1	multi-exon	FALSE	canonical	3	88	junction_23	64.9742001387741	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6606	False	NA	12	True	AATAAA	-42	NA	128067948	128088802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_40450_24	chr2	-	577	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	19	2170	19	-2170	multi-exon	FALSE	canonical	3	60	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGCCTGGGCTCCTGTTT	NA	False	NA	-19	True	AGTAAA	-20	NA	26242093	26240302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26240571_26241784
Isoform_40451_3	chr2	-	2762	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	0	4	0	-4	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTATGCGGGGCGGCCA	NA	False	NA	NA	False	AATAAA	-14	NA	26242112	26238136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26240571_26241784
Isoform_40452_15	chr2	-	1117	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2095	11	2095	0	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGGTTGGATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	26247664	26242198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
Isoform_40453_3	chr2	-	1074	9	NNC	ENSMUSG00000026928.15	novel	1947	12	NA	NA	2075	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	9.56229574945264	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGTTGGTTGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	26247684	26242201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247256_26247341_26247476
Isoform_40454_21	chr2	-	4339	23	FSM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	25	-1	-2	1	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270640	26252784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
Isoform_40455_5	chr2	-	4342	23	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_22	13.922824473587	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270647	26252784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
Isoform_40456_6	chr2	-	4363	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	13.1962303658192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270640	26252784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
Isoform_40457_3	chr2	-	4357	23	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_22	15.1671812948139	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270638	26252784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
Isoform_40458_25	chr2	-	2266	9	ISM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	10	0	0	0	intron_retention	FALSE	canonical	3	96	junction_8	85.196739227508	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279318	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927
Isoform_40459_60	chr2	-	2183	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	10	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279318	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
Isoform_4046_11	chr10	+	4430	29	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	88	junction_23	70.0407315897875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6604	False	NA	12	True	AATAAA	-42	NA	128067946	128088802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
Isoform_40460_177	chr2	-	2015	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	16	0	3	0	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279300	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_40462_18	chr2	-	2527	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	113.093784451811	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279318	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597
Isoform_40463_13	chr2	-	2421	9	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	27	junction_7	132.397070870167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279298	26272816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597_26279078_26279160
Isoform_40465_7	chr2	-	2079	9	FSM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	17	3	-7	-2	multi-exon	FALSE	canonical	3	6	junction_7	137.145907704167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279286	26272816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278927_26279078_26279160
Isoform_40466_131	chr2	-	1946	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	9	0	3	0	multi-exon	FALSE	canonical	3	120	junction_7	82.5556089640708	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279300	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
Isoform_40467_10	chr2	-	2190	7	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	120	junction_6	87.5817078821574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279300	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26279160
Isoform_40468_5	chr2	-	2866	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	146	junction_7	75.6811248136629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279312	26272814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_40469_6	chr2	-	2398	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_7	75.6981114799613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279303	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_4047_6	chr10	+	1939	12	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	899	intron_retention	FALSE	canonical	3	289	junction_7	43.1664087338199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGGGCAGCCCCAAGGT	6615	False	NA	18	True	NA	NA	NA	128067957	128080698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528
Isoform_40471_5	chr2	-	1998	9	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_3	120.39927065809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279326	26272813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
Isoform_40475_23	chr2	-	3341	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	-1	807	-1	-2	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTCTGGCCAAAGAG	985	False	NA	1	True	AATAAA	-21	NA	26299213	26287067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
Isoform_40476_6	chr2	-	3882	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	7	258	7	9	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	993	False	NA	NA	False	NA	NA	NA	26299205	26286518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
Isoform_40477_6	chr2	-	1252	6	NIC	ENSMUSG00000026922.14	novel	1273	6	NA	NA	-37	-25	combination_of_known_junctions	FALSE	canonical	3	216	junction_5	206.37577377202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACCAGAGGTCTCTTTC	9901	False	NA	-24	True	TATAAA	-20	NA	26493765	26483093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26493673
Isoform_40478_239	chr2	-	1374	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	91	24	-30	-24	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGAGGTCTCTTTCA	9572	False	NA	-23	True	TATAAA	-21	NA	26494253	26483092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
Isoform_40479_28	chr2	-	1578	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	-106	17	-21	-17	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTTTCAGAGAGTG	9375	False	NA	-16	True	TATAAA	-28	NA	26494450	26483085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
Isoform_4048_8	chr10	+	1733	13	ISM	ENSMUSG00000039994.16	ENSMUST00000105243.9	1746	14	-11	1280	0	899	5prime_fragment	FALSE	canonical	3	40	junction_1	95.2964672307776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGGGCAGCCCCAAGGT	6606	False	NA	18	True	NA	NA	NA	128067948	128080698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528
Isoform_40482_11	chr2	-	1320	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-67	20	54	-20	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGTCTCTTTCAGAGA	9535	False	NA	-19	True	TATAAA	-25	NA	26494290	26483088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
Isoform_40486_344	chr2	-	2589	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	45	337	16	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26792846	26780783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
Isoform_40489_7	chr2	-	561	4	ISM	ENSMUSG00000036160.14	ENSMUST00000114043.2	894	5	-38	2223	-9	-320	5prime_fragment	FALSE	canonical	3	289	junction_3	18.8738502225228	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAAGAGGAAGGAGCGC	NA	False	NA	4	True	NA	NA	NA	26792900	26783006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_26783080_26789348_26789438_26789740_26789945_26792705
Isoform_4049_6	chr10	+	4420	29	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	73.5504824551665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGACTTTTGTTGT	6612	False	NA	12	True	AATAAA	-42	NA	128067954	128088802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
Isoform_40490_58	chr2	-	1342	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-47	-322	-38	-4	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTTGTCTGTCTTTCT	NA	False	NA	-8	True	AATAAA	-14	NA	26800628	26795277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
Isoform_40491_14	chr2	-	1408	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-112	-323	-4	-3	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCTGTCTTTCTT	NA	False	NA	-7	True	AATAAA	-15	NA	26800693	26795276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
Isoform_40492_10	chr2	-	3521	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	-20	5	-20	-5	multi-exon	FALSE	canonical	3	168	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	26800709	26795278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26798314_26799004_26799086_26800304
Isoform_40493_70	chr2	-	3466	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	35	5	35	-5	multi-exon	FALSE	canonical	3	168	junction_1	2.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	26800654	26795278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26798314_26799004_26799086_26800304
Isoform_40495_105	chr2	-	981	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	188	4	3	-4	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806354	26803398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_40496_7	chr2	-	1152	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	17	4	17	-4	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806525	26803398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_40497_11	chr2	-	1018	9	FSM	ENSMUSG00000015790.17	ENSMUST00000167661.7	1151	9	129	4	6	-4	multi-exon	FALSE	canonical	3	32	junction_7	110.059571937201	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806351	26803398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
Isoform_40498_5	chr2	-	1053	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	0	-6	intron_retention	FALSE	canonical	3	328	junction_3	29.0460577254084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCATGGCTCAGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	26806357	26803400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
Isoform_40501_318	chr2	-	2804	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	477	0	-68	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	-2	True	AATAAA	-18	NA	26823463	26810051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
Isoform_40502_37	chr2	-	2880	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	400	1	-145	-1	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGTGGTCCTATATG	NA	False	NA	-3	True	AATAAA	-17	NA	26823540	26810052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
Isoform_40509_5	chr2	-	3533	7	ISM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	71	2	9	-2	intron_retention	FALSE	canonical	3	152	junction_5	25.8182751812226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGAGTGTGTGGAAG	NA	False	NA	-11	True	AATAAA	-9	NA	26854327	26843579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394
Isoform_40510_133	chr2	-	2214	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	65	-1	3	1	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTGTGTGGAAGTTC	NA	False	NA	-8	True	AATAAA	-12	NA	26854333	26843576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
Isoform_40512_6	chr2	-	2035	7	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	59.1629106789042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTGTGTGGAAGTTC	NA	False	NA	-8	True	AATAAA	-12	NA	26854348	26843576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394_26852736_26854063
Isoform_40515_15	chr2	-	3002	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	10	2260	-3	4	multi-exon	TRUE	canonical	3	192	junction_7	30.2258714644446	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27365688	27337850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
Isoform_4052_6	chr10	+	4476	24	FSM	ENSMUSG00000040033.17	ENSMUST00000085708.3	4394	24	-80	-2	-63	2	multi-exon	FALSE	canonical	0	0	junction_14	16.4593788801125	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTGTGAGAGTGTGCC	2298	False	NA	NA	False	AATAAA	-22	NA	128106364	128128720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128117970_128117989_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
Isoform_40524_87	chr2	-	742	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	11	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	63.8957484240279	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCCACGCCTCTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	28356317	28352013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_28352447_28355148_28355228_28356045_28356125_28356166
Isoform_40525_6	chr2	-	961	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	-192	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.8957484240279	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCCACGCCTCTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	28356536	28352013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_28352447_28355148_28355228_28356045_28356125_28356166
Isoform_40526_27	chr2	-	2621	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	110	8	20	-8	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCCAGCACTGGTGTTT	NA	False	NA	-57	True	AATAAA	-14	NA	28473181	28456330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_40527_112	chr2	-	2443	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	290	6	-1	-6	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCACTGGTGTTTGA	NA	False	NA	-55	True	AATAAA	-16	NA	28473001	28456328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_40529_9	chr2	-	2658	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	75	6	-15	-6	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCACTGGTGTTTGA	NA	False	NA	-55	True	AATAAA	-16	NA	28473216	28456328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_40532_3	chr2	-	3112	11	NIC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	0	0	intron_retention	TRUE	canonical	3	147	junction_6	18.5916647990437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473000	28456322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_28457190_28457619_28457797_28458496_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_40533_3	chr2	-	2461	12	FSM	ENSMUSG00000026816.15	ENSMUST00000113889.9	2667	12	197	9	-4	-9	multi-exon	FALSE	canonical	2	4	junction_2	52.8098100077803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGCCAGCACTGGTGTT	NA	False	NA	-58	True	AATAAA	-13	NA	28473004	28456331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28457190_28457619_28457815_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
Isoform_40534_3	chr2	-	3137	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-52	3856	14	-3856	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGATCAGGTGACT	NA	False	NA	-9	True	AATAAA	-13	NA	28730350	28716172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
Isoform_40537_29	chr2	-	1737	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	844	827	2	751	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTTTCTTTCTTATG	NA	False	NA	-7	True	TATAAA	-20	NA	29677670	29666948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_40538_23	chr2	-	2567	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	841	0	-1	0	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677673	29666121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_40539_8	chr2	-	2513	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-9	1426	2	0	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677681	29666121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
Isoform_40541_4	chr2	-	1598	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	-35	-819	3	750	multi-exon	FALSE	canonical	2	14	junction_1	60.8041025662651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGTTTTCTTTCTTAT	NA	False	NA	-8	True	TATAAA	-19	NA	29677669	29666949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_40542_30	chr2	-	995	7	ISM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	856	2332	2	152	5prime_fragment	FALSE	canonical	3	126	junction_1	24.0791518861349	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29677658	29668453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_40543_14	chr2	-	945	6	FSM	ENSMUSG00000039826.14	ENSMUST00000177133.8	806	6	13	-152	2	152	multi-exon	FALSE	canonical	3	76	junction_3	43.1879612855249	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29677670	29668453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
Isoform_40544_10	chr2	-	1972	6	ISM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	-47	685	2	152	5prime_fragment	FALSE	canonical	3	134	junction_3	19.239542614106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29677681	29668453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
Isoform_40545_122	chr2	-	1796	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	3	15	3	-15	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTCTACCTGA	NA	False	NA	-15	True	NA	NA	NA	29938890	29921572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_40547_3	chr2	-	2107	8	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	26	-17	intron_retention	FALSE	canonical	3	156	junction_3	12.0678354753959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAACTCTACCT	NA	False	NA	-17	True	NA	NA	NA	29938847	29921574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_40548_5	chr2	-	1939	8	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	13	-13	intron_retention	FALSE	canonical	3	156	junction_2	12.6813377263841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTCTACCTGAGA	NA	False	NA	-13	True	NA	NA	NA	29938860	29921570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_29921985_29922084_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
Isoform_4055_6	chr10	+	4402	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	-28	5	11	1	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCGCTAGTGTGGGAT	NA	False	NA	10	True	AATAAA	-19	NA	128139214	128157217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
Isoform_40550_78	chr2	-	1183	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	11	-7	-8	0	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983636	29980955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
Isoform_40552_488	chr2	-	1141	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	24	0	-8	0	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983636	29980955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_40553_42	chr2	-	1167	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	-3	1	-3	-1	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983663	29980956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_40557_31	chr2	-	1241	4	FSM	ENSMUSG00000015335.17	ENSMUST00000137001.2	846	4	-8	-387	-8	0	multi-exon	FALSE	canonical	3	619	junction_3	30.9443945740671	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983636	29980955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_29981846_29981999_29982078_29982416_29982554_29983500
Isoform_40558_5	chr2	-	2171	11	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	83	-25	62	7	3prime_fragment	FALSE	canonical	3	299	junction_5	40.0311128998433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGCTCACGTGACTGTA	NA	False	NA	-3	True	AATAAA	-40	NA	30068379	30063457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931
Isoform_40559_220	chr2	-	1822	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	2	-19	2	1	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACCTATGCTCACGTG	NA	False	NA	-9	True	AATAAA	-34	NA	30068460	30063463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
Isoform_4056_20	chr10	+	820	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	-62	5	-53	-5	multi-exon	FALSE	canonical	3	76	junction_1	1015.96602305392	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158274	128163051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40560_50	chr2	-	2023	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	11	-24	2	4	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTATGCTCACGTGACT	NA	False	NA	-6	True	AATAAA	-37	NA	30068460	30063460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
Isoform_40562_4	chr2	-	2167	11	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	72	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	115.679254838541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACCTATGCTCACGTGA	NA	False	NA	-8	True	AATAAA	-35	NA	30068369	30063462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931
Isoform_40564_7	chr2	-	1109	2	ISM	ENSMUSG00000039660.17	ENSMUST00000127309.8	2123	10	-8	3465	0	-555	5prime_fragment	FALSE	canonical	3	347	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAACAAATGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30068462	30066929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_30067978_30068401
Isoform_40565_6	chr2	-	1941	14	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	49.6595510039827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095828	30075137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
Isoform_40566_25	chr2	-	1708	12	ISM	ENSMUSG00000039648.15	ENSMUST00000113661.10	2057	13	4199	-6	-48	1	3prime_fragment	FALSE	canonical	3	127	junction_6	13.3880420309128	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	9488	False	NA	-4	True	AATAAA	-24	NA	30084172	30075136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
Isoform_40567_7	chr2	-	2099	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	-70	-3	-24	-2	multi-exon	FALSE	canonical	3	14	junction_13	49.789616559678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCAGCTTCTCTCTTC	NA	False	NA	-7	True	AATAAA	-21	NA	30095883	30075139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
Isoform_40569_23	chr2	-	1854	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	21	1	-10	1	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGCTTCTCTCTTCCTT	NA	False	NA	-4	True	AATAAA	-24	NA	30095838	30075136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
Isoform_40571_3	chr2	-	2358	10	NIC	ENSMUSG00000039648.15	novel	1850	13	NA	NA	-49	-3	intron_retention	FALSE	canonical	3	133	junction_9	11.5801021339235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTCAAGGCAGCTTCT	9487	False	NA	-13	True	AATAAA	-15	NA	30084173	30075145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
Isoform_40572_5	chr2	-	1938	12	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	91	junction_11	21.2688419140215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCAGCTTCTCTCTTC	NA	False	NA	-7	True	AATAAA	-21	NA	30095828	30075139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
Isoform_40573_12	chr2	-	1778	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	-30	1	-5	-1	multi-exon	FALSE	canonical	3	26	junction_3	118.792269553979	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249282	30234821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40575_80	chr2	-	1765	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	42	3	-9	-1	multi-exon	FALSE	canonical	3	213	junction_5	55.8	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249286	30234823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40577_9	chr2	-	1802	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	7	1	-4	-1	multi-exon	FALSE	canonical	3	213	junction_5	55.8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249321	30234821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40579_5	chr2	-	1705	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	-12	1	12	-1	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249289	30234823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_4058_12	chr10	+	884	6	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	1028.12695714099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158398	128163051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128158588_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40580_3	chr2	-	3249	10	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	236	junction_2	49.504457961124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATCTCAGTCCATGA	NA	False	NA	-11	True	AATAAA	-15	NA	30249318	30234821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40581_6	chr2	-	2260	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	213	junction_4	53.8401841759365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATCAGGATCTCAGTCCA	NA	False	NA	-14	True	AATAAA	-12	NA	30249369	30234824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40583_4	chr2	-	5271	8	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	286	junction_4	33.7463527885698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATCAGGATCTCAGTCCA	NA	False	NA	-14	True	AATAAA	-12	NA	30249260	30234824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
Isoform_40584_96	chr2	-	2705	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	292	836	3	561	multi-exon	TRUE	canonical	3	47	junction_2	7.8897731722819	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305533	30291948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_40585_31	chr2	-	2783	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	214	836	1	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305611	30291948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_40586_5	chr2	-	3205	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	-208	836	-208	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30306033	30291948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_40587_4	chr2	-	2725	14	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	-2	561	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.006244807594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305538	30291948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30292806_30293500_30293654_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
Isoform_40588_5	chr2	-	1428	7	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	8.78287475083693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTCTCCCAGTAAAAGC	NA	False	NA	NA	False	AATAAA	-30	NA	30691723	30685596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30685818_30686120_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
Isoform_40589_4	chr2	-	1562	6	ISM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	-15	263	-15	-1	intron_retention	FALSE	canonical	3	17	junction_1	5.63560112144215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGGTGCCTGATTGGG	NA	False	NA	NA	False	AGTAAA	-5	NA	30691734	30685575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925
Isoform_40590_5	chr2	-	1425	7	FSM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	-15	262	-15	0	multi-exon	FALSE	canonical	3	15	junction_6	6.6248689714506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTGCCTGATTGGGG	NA	False	NA	NA	False	AGTAAA	-6	NA	30691734	30685574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
Isoform_40591_199	chr2	-	2077	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2066	4	-2	-4	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTGTGTCTTTGTAT	1748	False	NA	-23	True	ATTAAA	-15	NA	30718279	30713112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
Isoform_40592_3	chr2	-	2173	5	NIC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	80	junction_2	9.60468635614927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTCTGTGTCTTTGTA	1745	False	NA	-24	True	ATTAAA	-14	NA	30718282	30713113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30714517_30714652_30714740_30715463_30715774_30716934_30717111_30718085
Isoform_40593_3	chr2	-	2805	5	FSM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	-15	2	-4	-2	multi-exon	FALSE	canonical	3	92	junction_4	10.6858551365813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGTCTTTGTATGA	1746	False	NA	-21	True	ATTAAA	-17	NA	30718281	30713110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934_30717111_30718085
Isoform_40594_7	chr2	-	2918	4	NIC	ENSMUSG00000039483.11	novel	2792	5	NA	NA	3	-2	intron_retention	FALSE	canonical	3	92	junction_3	6.48074069840786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGTCTTTGTATGA	1727	False	NA	-21	True	ATTAAA	-17	NA	30718300	30713110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30714517_30714652_30715774_30716934_30717111_30718085
Isoform_40595_3	chr2	-	2168	6	NNC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.3915085836775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1731	False	NA	-22	True	ATTAAA	-16	NA	30718296	30713111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_30714517_30714652_30714813_30715463_30715573_30715666_30715774_30716934_30717111_30718085
Isoform_40596_3	chr2	-	3604	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	37	6	37	-6	multi-exon	FALSE	canonical	3	78	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCTGTGGTCAT	8448	False	NA	NA	False	NA	NA	NA	30793272	30779488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_40597_12	chr2	-	817	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	36	2794	36	17	multi-exon	FALSE	canonical	3	78	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGCCATCATCCCATAT	8447	False	NA	NA	False	AATAAA	-16	NA	30793273	30782276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_40598_3	chr2	-	778	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	13	2856	13	-31	multi-exon	FALSE	canonical	3	78	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCTTAAACATCACAC	8424	False	NA	NA	False	NA	NA	NA	30793296	30782338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30782839_30790878_30790962_30793101
Isoform_4060_948	chr10	+	937	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	75	371	-11	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158402	128163051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40600_857	chr2	-	1364	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	35	2	-10	-2	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGGTGGCTTTGTGTGTC	NA	False	NA	-10	True	TTTAAA	-28	NA	30857910	30850640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
Isoform_40606_88	chr2	-	1284	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	37	663	37	-663	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGCCTGTCTTCTA	NA	False	NA	NA	False	ATTAAA	-10	NA	30871916	30862851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
Isoform_40607_7	chr2	-	1562	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	-241	663	19	-663	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGCCTGTCTTCTA	NA	False	NA	NA	False	ATTAAA	-10	NA	30872194	30862851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
Isoform_40608_3	chr2	-	2728	8	NIC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	25	-663	intron_retention	FALSE	canonical	3	354	junction_3	15.6973935182025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGCCTGTCTTCTA	NA	False	NA	NA	False	ATTAAA	-10	NA	30871928	30862851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30871555_30871789
Isoform_4061_69	chr10	+	964	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	48	371	-7	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158375	128163051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40611_13	chr2	-	4697	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4783	False	NA	-5	True	AATAAA	-18	NA	31032005	30916217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40612_8	chr2	-	2050	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-194	3	0	-3	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAACAAAAAGCATTG	4780	False	NA	7	True	NA	NA	NA	31032008	30923013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40613_4	chr2	-	3181	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-225	-1097	-19	792	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGCCTTTCCTTTCC	4749	False	NA	NA	False	AATAAA	-28	NA	31032039	30921913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40614_7	chr2	-	2424	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-152	-413	1	108	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTAGCCTGGAACGTTC	4822	False	NA	NA	False	AATAAA	-16	NA	31031966	30922597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40615_7	chr2	-	2488	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-215	-414	-9	109	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGCCTGGAACGTTCT	4759	False	NA	NA	False	AATAAA	-17	NA	31032029	30922596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40616_25	chr2	-	1981	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	-67	-4	2	4	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGTCTTCTTGTTT	4770	False	NA	-9	True	NA	NA	NA	31032018	30943242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
Isoform_40617_3	chr2	-	468	2	FSM	ENSMUSG00000087269.2	ENSMUST00000133550.2	920	2	38	414	38	-414	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTTATGT	8924	False	NA	NA	False	TATAAA	-16	NA	31042265	31041066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_31041263_31041993
Isoform_40618_6	chr2	-	3070	2	FSM	ENSMUSG00000050592.9	ENSMUST00000130178.2	525	2	3	-2548	3	-5	multi-exon	TRUE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31969361	31956883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_31959786_31969193
Isoform_40619_8	chr2	-	4058	2	FSM	ENSMUSG00000050592.9	ENSMUST00000056406.7	4107	2	44	5	44	-5	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31973751	31956883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_31959786_31972595
Isoform_4062_17	chr10	+	1315	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	57	11	2	-11	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGAGATGAGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	128158384	128163411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40621_3	chr2	-	4556	3	ISM	ENSMUSG00000050592.9	ENSMUST00000139629.2	3236	6	-161	16813	27	-1	5prime_fragment	FALSE	canonical	2	4	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGGCTCTGGTGGCAA	NA	False	NA	NA	False	AATAAA	-34	NA	31974842	31956879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_31959786_31972595_31973621_31974217
Isoform_40622_4	chr2	-	4349	3	ISM	ENSMUSG00000050592.9	ENSMUST00000139629.2	3236	6	42	16817	42	-5	5prime_fragment	FALSE	canonical	2	4	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31974639	31956883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_31959786_31972595_31973621_31974217
Isoform_40623_6	chr2	-	3990	3	NIC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	AATAAA	-35	NA	31974896	31956878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_31959786_31972595_31973621_31974838
Isoform_40624_7	chr2	-	2991	2	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	4880	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCCTTGGCTCTGGTG	NA	False	NA	NA	False	AATAAA	-30	NA	31964484	31956883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_31959786_31964395
Isoform_40625_321	chr2	-	1912	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	90	3	-8	-3	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATTTGTCCTGTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	32150081	32145016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_40626_17	chr2	-	1991	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	13	1	13	-1	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150158	32145014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_40628_4	chr2	-	2105	6	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	135	junction_2	21.5072080940321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150121	32145014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148680_32149591_32149752_32149920
Isoform_40629_4	chr2	-	3337	6	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	136	junction_1	18.9567929777165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150081	32145014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32146224_32146629_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_40630_5	chr2	-	1971	8	NNC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.0064932327138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	32150084	32145014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_32146224_32146370_32146425_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_40631_4	chr2	-	3747	5	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	158	junction_1	12.3592070943083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATTTGTCCTGTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	32150087	32145016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
Isoform_40634_743	chr2	-	746	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	22	0	-15	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178058	32168827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
Isoform_40636_12	chr2	-	627	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	-3	-102	-3	0	multi-exon	FALSE	canonical	3	43	junction_4	1473.86522026269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178084	32168827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
Isoform_40637_9	chr2	-	611	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113397.9	580	4	-31	0	-5	0	multi-exon	FALSE	canonical	3	66	junction_2	1606.82426612938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178048	32168827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32169144_32170720_32170816_32177608_32177658_32177897
Isoform_40638_8	chr2	-	2461	2	FSM	ENSMUSG00000044627.12	ENSMUST00000127131.3	4511	2	0	2050	0	-2050	multi-exon	FALSE	canonical	3	3619	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	32178043	32175342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32177658_32177897
Isoform_40639_3	chr2	-	3817	22	NIC	ENSMUSG00000026825.18	novel	4605	22	NA	NA	9	-1	combination_of_known_splicesites	TRUE	canonical	1	4	junction_5	4.15351666425839	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGTGTACCTCTGCTGG	NA	False	NA	1	True	AATAAA	-23	NA	32243341	32198483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32199647_32202138_32202355_32202695_32202938_32204901_32205073_32205347_32205360_32205810_32205923_32206909_32207020_32210515_32210630_32213190_32213203_32213433_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
Isoform_4064_24	chr10	+	1083	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	-71	371	-71	-5	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAAACTGTGTTGTCT	NA	False	NA	28	True	AATGAA	-24	NA	128158256	128163051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
Isoform_40640_31	chr2	-	635	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	38	7	-38	-7	multi-exon	FALSE	canonical	3	268	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	32271912	32269119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32269546_32271703
Isoform_40643_16	chr2	-	3314	11	FSM	ENSMUSG00000026819.16	ENSMUST00000028160.15	3294	11	-20	0	3	0	multi-exon	FALSE	canonical	3	9	junction_7	31.7200252206709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8156	False	NA	-6	True	AATAAA	-17	NA	32341454	32304498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32341078
Isoform_40645_4	chr2	-	3555	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113308.8	2643	10	-432	-480	-15	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	2281	False	NA	-9	True	AATAAA	-14	NA	32321196	32304501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32320540
Isoform_40646_228	chr2	-	3280	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	1	-3	1	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8154	False	NA	-6	True	AATAAA	-17	NA	32341456	32304498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
Isoform_40648_60	chr2	-	3303	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	-22	-3	-22	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8131	False	NA	-6	True	AATAAA	-17	NA	32341479	32304498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
Isoform_40653_1018	chr2	-	2248	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	26	-1	-24	1	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTCTCCTAGCTCCCT	NA	False	NA	-12	True	AATAAA	-21	NA	32584171	32572619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
Isoform_40661_13	chr2	-	2123	14	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	3	-6	intron_retention	FALSE	canonical	2	5	junction_4	102.490236221359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584144	32572627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
Isoform_40667_717	chr2	-	1684	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	47	2	20	-2	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGCGTTTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	32602749	32597451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_40668_45	chr2	-	2180	7	FSM	ENSMUSG00000009555.17_ENSMUSG00000105841.3_ENSMUSG00000093280.3	ENSMUST00000009699.16	1733	7	-451	4	-159	2	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGCTGCGTTTCCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	32603247	32597453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_40669_11	chr2	-	3369	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	18	-1654	-9	0	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	32602778	32595795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_40673_45	chr2	-	1861	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGCGTTTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	32602769	32597451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
Isoform_40677_10	chr2	-	3561	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-31	362	-31	-3	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGGTGCCTGGGCC	5118	False	NA	-26	True	AATAAA	-12	NA	32737288	32677975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
Isoform_40679_3	chr2	-	3937	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_25	6.16389487256231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTACACAGTTTGCA	NA	False	NA	-9	True	AATAAA	-17	NA	32851614	32815235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851191_32851573
Isoform_40680_20	chr2	-	4057	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	-26	-1	-26	1	multi-exon	TRUE	canonical	3	22	junction_16	3.74165738677394	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACACAGTTTGCATAGAT	NA	False	NA	-4	True	AATAAA	-22	NA	32851652	32815230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
Isoform_40682_552	chr2	-	2092	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	26	-10	12	10	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCAGAAGTCTTTTGC	3976	False	NA	-3	True	AATAAA	-25	NA	32872068	32862991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
Isoform_40683_11	chr2	-	2233	9	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	16	2	intron_retention	FALSE	canonical	3	167	junction_4	8.8175960442742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGTGGAGCCAGAAG	3980	False	NA	-11	True	AATAAA	-17	NA	32872064	32862999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
Isoform_40686_6	chr2	-	2646	8	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	-5	1	intron_retention	FALSE	canonical	3	169	junction_5	7.85064666516233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTCAGTGGAGCCAGAA	3956	False	NA	-12	True	AATAAA	-16	NA	32872088	32863000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
Isoform_40687_12	chr2	-	2786	7	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	10	6	intron_retention	FALSE	canonical	3	169	junction_5	8.47381587925744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGAGCCAGAAGTCTT	3974	False	NA	-7	True	AATAAA	-21	NA	32872070	32862995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
Isoform_40689_48	chr2	-	3609	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	-8	True	AATAAA	-20	NA	33020615	32876383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_4069_2657	chr10	+	2855	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	68	3	-8	-3	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGAGCTTGCTCTTAC	NA	False	NA	15	True	AATAAA	-15	NA	128173670	128198345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_40690_10	chr2	-	3798	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTACTGCCTGTTCACT	NA	False	NA	NA	False	TATAAA	-19	NA	33020655	32876234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40691_5	chr2	-	3738	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	28.3486429226437	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33020656	32876385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40692_3	chr2	-	1589	9	ISM	ENSMUSG00000038860.16	ENSMUST00000049618.9	3678	28	78922	3901	884	-3901	internal_fragment	FALSE	canonical	3	73	junction_3	8.20727573558973	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAATGACAT	NA	False	NA	NA	False	NA	NA	NA	32897456	32880286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260
Isoform_40693_9	chr2	-	3316	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	1	-3901	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	18.5239251366749	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAATGACAT	NA	False	NA	NA	False	NA	NA	NA	33020619	32880286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40694_6	chr2	-	2261	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-17	-5791	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGGCCTGGGCCTGTG	NA	False	NA	NA	False	TATAAA	-32	NA	33020637	32915111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40695_3	chr2	-	2765	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	5	-5265	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAACAGAGCTCACAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	33020615	32914585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40696_6	chr2	-	1628	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	6	-6401	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAGAGCAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	33020614	32915721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
Isoform_40697_3	chr2	-	2523	18	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	9.43122987132713	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGTCTTGTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	33261487	33026983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
Isoform_40698_4	chr2	-	5113	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	-57	-3228	-3	-7	multi-exon	FALSE	canonical	3	37	junction_1	10.6770782520313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAAGTTGTGTTGTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	33358574	33340305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
Isoform_4070_61	chr10	+	2930	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	-7	3	-7	-3	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGAGCTTGCTCTTAC	NA	False	NA	15	True	AATAAA	-15	NA	128173595	128198345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_40701_3	chr2	-	5174	4	NIC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	-5	True	AATAAA	-21	NA	33358569	33340302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_33345136_33352277_33352370_33354925_33355050_33358444
Isoform_40705_9	chr2	-	5051	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	-57	4	-30	-4	multi-exon	FALSE	canonical	3	44	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	-5	True	AATAAA	-21	NA	33358601	33340302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_33345136_33354925_33354987_33358444
Isoform_40709_10	chr2	-	5055	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	31	-4599	4	-2	multi-exon	TRUE	canonical	3	37	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGTTGTTTTCACTC	NA	False	NA	-3	True	AATAAA	-23	NA	33358540	33340300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_33345136_33354925_33355050_33358444
Isoform_40713_8	chr2	-	4515	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	483	0	19	0	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTTGCTGTTATTT	4232	False	NA	-1	True	AATAAA	-20	NA	33777475	33619964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
Isoform_40715_11	chr2	-	524	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	0	-4	0	4	multi-exon	FALSE	canonical	3	76	junction_1	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGTGTGTTTTGATG	4213	False	NA	-1	True	AATAAA	-19	NA	33777494	33763621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_33763860_33764349_33764473_33777331
Isoform_40716_8	chr2	-	5121	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	139	498	3	0	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGCTGTGACATTCCC	5919	False	NA	NA	False	AATAAA	-20	NA	34644434	34567494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_40717_5	chr2	-	5597	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	159	2	9	-2	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	5939	False	NA	NA	False	NA	NA	NA	34644414	34566998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_40718_3	chr2	-	5052	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	138	505	2	-7	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAGAGTAGGCTGTGA	5918	False	NA	NA	False	AATAAA	-13	NA	34644435	34567501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
Isoform_4072_482	chr10	+	1651	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	11	1264	11	-1264	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTTTAAGACTTAAGAT	NA	False	NA	27	True	AATAAA	-23	NA	128173613	128197084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_40725_5	chr2	-	1459	8	NIC	ENSMUSG00000070953.14	novel	1431	8	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	158.767317872696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGACTTTTTACAAA	2808	False	NA	-24	True	AATAAA	-15	NA	34689753	34669230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689434
Isoform_40727_33	chr2	-	1167	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGACTTTTTACAAA	2772	False	NA	-24	True	AATAAA	-15	NA	34689789	34669230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_40729_11	chr2	-	1176	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	140.541227882404	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2772	False	NA	-22	True	AATAAA	-17	NA	34689789	34669228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689762
Isoform_40734_30	chr2	-	1464	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	-13	-20	13	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2808	False	NA	-22	True	AATAAA	-17	NA	34689753	34669228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
Isoform_40735_211	chr2	-	1172	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	135	1661	-23	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2772	False	NA	-22	True	AATAAA	-17	NA	34689789	34669228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_40736_13	chr2	-	1710	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	135	1123	-23	538	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGTAAAAAAA	2772	False	NA	NA	False	NA	NA	NA	34689789	34668690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
Isoform_40738_4	chr2	-	2102	8	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	128.342971632057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTTGAAATTGAA	9217	False	NA	-1	True	ATTAAA	-17	NA	34716226	34695347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715691_34716083_34716183
Isoform_4074_166	chr10	+	1693	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	11	1222	11	-1222	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATTTGAAGTTAAAA	NA	False	NA	-20	True	ATTAAA	-19	NA	128173613	128197126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
Isoform_40740_34	chr2	-	1821	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	18	-1	0	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9214	False	NA	-3	True	ATTAAA	-15	NA	34716229	34695349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
Isoform_40742_6	chr2	-	2975	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	21	-1158	1	333	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGCGCTTTGTTTT	9217	False	NA	NA	False	NA	NA	NA	34716226	34694192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
Isoform_40743_4	chr2	-	2122	8	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	2	-66	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	121.468900865823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTAATCTGCTAATTG	9218	False	NA	-17	True	AGTAAA	-13	NA	34716225	34695418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715691_34716083_34716183
Isoform_40745_5	chr2	-	1960	7	FSM	ENSMUSG00000035949.16	ENSMUST00000028220.10	2030	7	-90	160	4	0	multi-exon	FALSE	canonical	3	260	junction_4	71.5238887831658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9268	False	NA	-3	True	ATTAAA	-15	NA	34716175	34695349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
Isoform_40746_36	chr2	-	1909	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	15	-1	0	-1	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTTGTTCTTTGAAAT	9216	False	NA	-5	True	ATTAAA	-13	NA	34716227	34695351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40747_84	chr2	-	1887	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	37	-1	8	-1	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTTGTTCTTTGAAAT	9238	False	NA	-5	True	ATTAAA	-13	NA	34716205	34695351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40749_3	chr2	-	2007	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	6	-90	6	-73	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTTTGAATTCTGTG	9207	False	NA	84	True	TTTAAA	-14	NA	34716236	34695262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40751_3	chr2	-	3066	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	18	-1161	3	334	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCGCTTTGTTTTA	9219	False	NA	NA	False	NA	NA	NA	34716224	34694191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40752_3	chr2	-	1989	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	29	-95	0	-68	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAATTCTGTGACATT	9230	False	NA	89	True	TTTAAA	-19	NA	34716213	34695257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40755_7	chr2	-	1836	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	94	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAGCTCCAATATGTT	9214	False	NA	NA	False	NA	NA	NA	34716229	34701850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40756_7	chr2	-	929	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	102	899	-2	0	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTC	9222	False	NA	NA	False	NA	NA	NA	34716221	34702749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
Isoform_40757_15	chr2	-	827	2	FSM	ENSMUSG00000035949.16	ENSMUST00000126051.2	852	2	14	11	0	-11	multi-exon	FALSE	canonical	3	239	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAATAAAACAAAA	9230	False	NA	NA	False	NA	NA	NA	34716213	34715285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34716083_34716183
Isoform_40758_628	chr2	-	2008	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2366	-6	2	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760951	34742111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
Isoform_40763_56	chr2	-	1875	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	14	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34760951	34742099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
Isoform_40766_5	chr2	-	2148	11	FSM	ENSMUSG00000026875.15	ENSMUST00000113064.8	2325	11	176	1	1	-1	multi-exon	FALSE	canonical	1	1	junction_10	3.16385840391127	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTTCAGGTGTGAGACC	NA	False	NA	NA	False	AAAACA	-22	NA	34851608	34833270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849486_34849526_34850832_34850900_34851535
Isoform_40769_20	chr2	-	2989	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	85	7	-53	-7	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAACATAGTTGCATTA	9637	False	NA	NA	False	AATAAA	-19	NA	35091047	35070223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40770_122	chr2	-	2935	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	145	1	1	-1	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTTGCATTATTTTTG	9697	False	NA	NA	False	AATAAA	-25	NA	35090987	35070217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40772_43	chr2	-	1661	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	109	1311	-29	613	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAGTTTGTACAGTG	9661	False	NA	-16	True	AATAAA	-27	NA	35091023	35071527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40773_49	chr2	-	1036	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	85	1960	-53	-2	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	9637	False	NA	NA	False	NA	NA	NA	35091047	35072176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40774_336	chr2	-	977	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	144	1960	0	-2	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	9696	False	NA	NA	False	NA	NA	NA	35090988	35072176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40776_8	chr2	-	1725	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	45	1311	45	613	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAGTTTGTACAGTG	9597	False	NA	-16	True	AATAAA	-27	NA	35091087	35071527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
Isoform_40781_43	chr2	-	2821	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-33	-1	-33	1	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	1	True	AATAAA	-21	NA	35227021	35203996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
Isoform_40782_5	chr2	-	3472	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	26.2678510731274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	1183	False	NA	-2	True	AATAAA	-14	NA	35335827	35290193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_40783_12	chr2	-	3426	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	182	-2	-1	-2	multi-exon	FALSE	canonical	3	26	junction_8	26.0836994117016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351279	35290192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_40784_4	chr2	-	3419	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	821	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35352422	35290192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40785_6	chr2	-	3428	8	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	1190	False	NA	-3	True	AATAAA	-13	NA	35335820	35290194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_40787_13	chr2	-	3378	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	11	2	-6	-2	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351267	35290192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_40788_4	chr2	-	3570	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	633	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352610	35290193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40789_6	chr2	-	3478	8	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	724	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352519	35290194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40790_6	chr2	-	3441	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	762	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352481	35290193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40791_3	chr2	-	3348	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	33.8797392949515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	1240	False	NA	-3	True	AATAAA	-13	NA	35335770	35290194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
Isoform_40792_3	chr2	-	3408	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	762	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	34.0293990543471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	False	NA	-5	True	AATAAA	-11	NA	35352481	35290196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40793_11	chr2	-	3350	7	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.0646049233246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35351306	35290193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35351206
Isoform_40794_5	chr2	-	3370	7	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	766	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.4846117415616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352477	35290194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40795_4	chr2	-	3333	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	710	-93	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.4846117415616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGTAAGCTTAGGATT	NA	False	NA	-96	True	AATAAA	-22	NA	35352533	35290287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40796_3	chr2	-	3440	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	700	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	32.4846117415616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTGGTATGGATTA	NA	False	NA	1	True	AATAAA	-17	NA	35352543	35290190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
Isoform_40797_373	chr2	-	792	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	62	7	62	-7	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACAGTTGTGTTTTA	NA	False	NA	-8	True	ATTAAA	-8	NA	35939356	35926344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
Isoform_40798_429	chr2	-	763	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	91	7	91	-7	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACAGTTGTGTTTTA	NA	False	NA	-8	True	ATTAAA	-8	NA	35939327	35926344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
Isoform_408_868	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
Isoform_40801_3	chr2	-	2511	4	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	12623	9	2836	-8	3prime_fragment	FALSE	canonical	1	1	junction_2	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCCAGAATGCCATGG	NA	False	NA	NA	False	AATAAA	-31	NA	35981449	35971973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
Isoform_40802_103	chr2	-	2455	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	162	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026623	36006090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
Isoform_40805_5	chr2	-	1294	3	ISM	ENSMUSG00000026889.13	ENSMUST00000134668.2	714	6	4	8449	0	3	5prime_fragment	FALSE	canonical	3	277	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36026623	36016228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_36017264_36024146_36024276_36026493
Isoform_40806_4	chr2	-	2829	5	FSM	ENSMUSG00000009030.15	ENSMUST00000147703.3	685	5	-61	-2083	-4	-1	multi-exon	FALSE	canonical	2	4	junction_4	84.8130296593631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	-8	True	AATAAA	-19	NA	37249269	37240086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363_37248411_37249154
Isoform_40807_60	chr2	-	2746	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	111	1	-25	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	-8	True	AATAAA	-19	NA	37249233	37240086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
Isoform_40810_23	chr2	-	2808	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	49	1	-30	-1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	-8	True	AATAAA	-19	NA	37249295	37240086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
Isoform_40813_14	chr2	-	504	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	3	4760	2	1551	multi-exon	FALSE	canonical	3	22	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAACAAATTAAGAG	NA	False	NA	NA	False	NA	NA	NA	37333130	37326939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37327012_37332698
Isoform_40815_27	chr2	-	3214	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-70	0	3	0	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	37593357	37473167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
Isoform_40816_52	chr2	-	2716	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-70	498	3	-498	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGCCTGGTTCCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37593357	37473665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
Isoform_40818_3	chr2	-	3253	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTCTTGTGGCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	37593870	37473166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
Isoform_40819_3	chr2	-	2771	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-17	-499	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593888	37473666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
Isoform_40826_20	chr2	-	4348	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-8	2	-6	-2	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177395	37689004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
Isoform_40828_4	chr2	-	4298	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	17.917868176767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGACTGACCGTTTA	NA	False	NA	-8	True	AATAAA	-9	NA	38177396	37689011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38133413_38133485_38177124
Isoform_40829_5	chr2	-	4170	20	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	18.3463145513678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177387	37689004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38049818_38049863_38133413_38133485_38177124
Isoform_4083_4	chr10	+	2237	3	ISM	ENSMUSG00000025373.15	ENSMUST00000217826.2	1984	6	-1	8887	-1	-8887	5prime_fragment	FALSE	canonical	3	130	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAATTAAAATGAATTA	281	False	NA	NA	False	GATAAA	-24	NA	128247580	128266399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128247695_128250987_128251171_128264459
Isoform_40833_1540	chr2	-	961	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	169	30	2	-30	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	1540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAAAGAC	2382	False	NA	-48	True	AAAACA	-24	NA	38533930	38478077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
Isoform_40836_26	chr2	-	4797	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-185	1329	-127	-1329	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	ACTAAA	-36	NA	38816414	38614714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
Isoform_40838_3	chr2	-	4729	10	NIC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-103	-1328	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	35.8869968541515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	ACTAAA	-37	NA	38816390	38614713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38775207_38775250_38816129
Isoform_40839_20	chr2	-	4805	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-137	-1328	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	22.851914580621	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	ACTAAA	-37	NA	38816424	38614713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
Isoform_4084_72	chr10	+	2322	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-97	919	-8	2	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTCTTATGCCCTTT	218	False	NA	NA	False	AAGAAA	-31	NA	128247517	128275288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_40844_4632	chr2	-	446	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	499	1	-3	-1	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	4632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
Isoform_4085_77	chr10	+	2249	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-31	926	2	-5	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAAACCTTTCTTAT	284	False	NA	NA	False	AAGAAA	-24	NA	128247583	128275281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_40851_11	chr2	-	3452	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	99	564	-32	-564	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTGTCTACTTTGAAT	NA	False	NA	-17	True	AATAAA	-18	NA	39116364	39084929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_40852_28	chr2	-	1569	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	102	2444	-29	-21	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCCTTGTTGTGTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	39116361	39086809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_40853_14	chr2	-	3966	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	133	16	2	-16	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGTGAAAAATAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	39116330	39084381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_40854_3	chr2	-	4078	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	30	7	30	-7	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTTATCTCATGC	NA	False	NA	NA	False	AATAAA	-22	NA	39116433	39084372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_40855_7	chr2	-	1646	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	25	2444	25	-21	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCCTTGTTGTGTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	39116438	39086809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_40858_5	chr2	-	1701	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	-30	2444	-30	-21	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCCTTGTTGTGTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	39116493	39086809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
Isoform_4086_8	chr10	+	3155	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-10	-1	-10	1	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTCACCCCCCTT	305	False	NA	NA	False	AATAAA	-18	NA	128247604	128276208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_40860_81	chr2	-	2554	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_10	9.30644937664198	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	False	NA	-3	True	AATAAA	-28	NA	44817280	44454423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
Isoform_40861_5	chr2	-	4023	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	37	6	2	-6	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATATCTGATGAAGCA	NA	False	NA	NA	False	AGTAAA	-12	NA	48839251	48792841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_40864_86	chr2	-	1647	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	37	2382	2	110	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839251	48795217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_40866_3	chr2	-	1449	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	16	110	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	129.679171419315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839227	48795217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_40867_7	chr2	-	1170	7	FSM	ENSMUSG00000026761.13	ENSMUST00000090976.10	1153	7	-6	-11	1	11	multi-exon	FALSE	canonical	3	33	junction_1	170.808290847436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGTTTTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	48839252	48821958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_48822610_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
Isoform_40868_3	chr2	-	1414	9	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	256.06270594329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCTTGTGTTTTTTAT	NA	False	NA	-4	True	AATAAA	-16	NA	50186719	50169896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_50170415_50170584_50170671_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
Isoform_40869_4	chr2	-	1588	7	NIC	ENSMUSG00000026766.17	novel	803	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	58	junction_6	217.804193409279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186699	50169894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263
Isoform_4087_3	chr10	+	3240	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-94	-2	-5	2	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAGTCACCCCCCTTA	221	False	NA	NA	False	AATAAA	-19	NA	128247520	128276209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
Isoform_40870_19	chr2	-	1256	8	NIC	ENSMUSG00000026766.17	novel	803	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186699	50169893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
Isoform_40871_3	chr2	-	1621	7	ISM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-17	-468	-9	-1	intron_retention	FALSE	canonical	3	69	junction_6	213.816445163187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186716	50169893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263
Isoform_40872_17	chr2	-	1272	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-3	-466	-3	-3	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTTGTGTTTTTTATT	NA	False	NA	-3	True	AATAAA	-17	NA	50186702	50169895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
Isoform_40873_44	chr2	-	1647	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	27	1	-3	-1	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186702	50169893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
Isoform_40874_165	chr2	-	1311	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	30	1	0	-1	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186699	50169893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
Isoform_40875_9	chr2	-	1320	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTGTTTTTTATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	50186743	50169893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
Isoform_40877_603	chr2	-	2824	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	4	0	3	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039119	51020449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
Isoform_40878_32	chr2	-	2898	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	-70	0	-70	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039193	51020449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
Isoform_40883_4	chr2	-	647	4	NNC	ENSMUSG00000086523.2	novel	603	3	NA	NA	-82228	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.16024689946929	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCCTAGTT	NA	False	NA	NA	False	TATAAA	-9	NA	51337739	51253582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_51253903_51266332_51266409_51306587_51306703_51337603
Isoform_40884_3	chr2	-	5235	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	2	2	2	-2	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTCTTGGGGGTTTT	4757	False	NA	-5	True	AATAAA	-20	NA	52314911	52287964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_40887_25	chr2	-	1478	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-8	3769	-8	667	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTTTTTGTTGCTCAG	4747	False	NA	0	True	AATGAA	-24	NA	52314921	52291731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_40888_15	chr2	-	1621	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	55	3563	55	873	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATGGTGTGAAATATA	4810	False	NA	-3	True	ATTAAA	-24	NA	52314858	52291525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_40891_5	chr2	-	3223	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-7	2023	-7	-2023	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCATAACATTTG	4748	False	NA	NA	False	GATAAA	-16	NA	52314920	52289985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
Isoform_40894_37	chr2	-	4154	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	22	541	2	-541	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTGTAAATGTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	52632190	52582216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_40895_67	chr2	-	2998	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	21	1698	1	-1698	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAATCTTATCGTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	52632191	52583373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_40897_3	chr2	-	3772	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-11	956	-11	-956	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGATCCAGTTGAACTG	NA	False	NA	NA	False	NA	NA	NA	52632223	52582631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_40898_4	chr2	-	3374	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-8	1351	-8	-1351	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCCTTGATAACGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	52632220	52583026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_40899_7	chr2	-	3258	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-239	1698	-158	-1698	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAATCTTATCGTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	52632451	52583373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
Isoform_409_685	SIRV5	+	519	2	ISM	SIRV5A	SIRV503	526	3	0	149	0	2	5prime_fragment	FALSE	canonical	3	11825	junction_1	0	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	8201	10993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_SIRV5_+_8586_10858
Isoform_4090_4	chr10	+	3693	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	17	823	3	-7	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAACTTTTTTAAT	2684	False	NA	NA	False	AAAAAG	-17	NA	128295179	128325218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_40900_5	chr2	-	2608	24	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-14	3187	3	-2484	5prime_fragment	FALSE	canonical	3	422	junction_23	69.4211279487094	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGCATAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	53081213	53031673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
Isoform_4091_5	chr10	+	2690	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15198	822	291	-6	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAACTTTTTTAATT	6972	False	NA	NA	False	AAAAAG	-18	NA	128310360	128325219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_40911_4	chr2	-	3076	12	FSM	ENSMUSG00000026836.16	ENSMUST00000112601.9	3050	12	-28	2	-28	-2	multi-exon	FALSE	canonical	3	10	junction_10	14.1281034036818	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGATGATTTTCCTTC	NA	False	NA	-7	True	AATAAA	-12	NA	58456868	58336454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
Isoform_40912_3	chr2	-	2050	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	4	junction_10	23.1810267244572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712927	59682709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
Isoform_40913_3	chr2	-	2092	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	-22	2	-15	-2	multi-exon	FALSE	canonical	3	14	junction_10	21.0228447171167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712950	59682709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
Isoform_40915_5	chr2	-	2052	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	21.0570653225942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATTGCAATGCCTAAG	NA	False	NA	-6	True	AATAAA	-14	NA	59712930	59682713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
Isoform_40916_4	chr2	-	2063	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	18.5580171354593	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712918	59682709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
Isoform_40917_4	chr2	-	1995	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	14.3488675511345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712927	59682709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
Isoform_40919_3	chr2	-	2112	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	19.790149064623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAATGCCTAAGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	59712930	59682709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712744
Isoform_4092_6	chr10	+	2492	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15222	996	315	-180	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTTTCTAATGCCTG	6996	False	NA	13	True	NA	NA	NA	128310384	128325045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_40920_7	chr2	-	2053	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	18.0765040867973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAATGCCTAAGTGTGT	NA	False	NA	-1	True	AATAAA	-19	NA	59712947	59682708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
Isoform_40922_4	chr2	-	2534	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39408	-10492	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_7	31.1854230730465	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTAGCTGAGAATCAA	1578	False	NA	NA	False	NA	NA	NA	59881006	59765557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_40923_6	chr2	-	2947	16	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_12	34.6288255006657	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_40924_9	chr2	-	2758	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_12	33.1397781821059	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_40925_3	chr2	-	2752	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_12	36.456361948645	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
Isoform_40926_3	chr2	-	2662	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_11	34.2839285249232	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1573	False	NA	0	True	NA	NA	NA	59881011	59767028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_40927_5	chr2	-	2502	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39374	-11963	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_6	32.3097068968958	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	1544	False	NA	0	True	NA	NA	NA	59881040	59767028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
Isoform_40928_14	chr2	-	2879	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	10699	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_11	35.8412742348191	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGCCGTGCGCTGGGC	1573	False	NA	NA	False	TATAAA	-7	NA	59881011	59773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_4093_5	chr10	+	3496	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15216	-2	309	2	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	6990	False	NA	48	True	TATAAA	-21	NA	128310378	128326043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
Isoform_40930_4	chr2	-	2854	15	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	10699	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_11	38.7385269387951	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGCCGTGCGCTGGGC	1592	False	NA	NA	False	TATAAA	-7	NA	59880992	59773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_40931_6	chr2	-	2665	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	10699	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	37.823163748903	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGGCCGTGCGCTGGGC	1592	False	NA	NA	False	TATAAA	-7	NA	59880992	59773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
Isoform_40932_6	chr2	-	2595	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	10700	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_10	35.5537762539672	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCCGTGCGCTGGGCA	1573	False	NA	NA	False	TATAAA	-8	NA	59881011	59773105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
Isoform_40936_3	chr2	-	516	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-115	5	-24	-5	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTCCTTTAATTGAC	9088	False	NA	NA	False	AATAAA	-11	NA	60040207	60036942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_60037308_60040056
Isoform_40937_20	chr2	-	1017	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	337	0	267	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4269	False	NA	-4	True	AATAAA	-15	NA	60114495	60082336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
Isoform_40940_13	chr2	-	6854	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-30	-1652	-30	-5	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTAATCTCCTTGG	NA	False	NA	-16	True	AATAAA	-15	NA	60213605	60122451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_40946_6	chr2	-	2154	6	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-72	62489	0	-62489	5prime_fragment	FALSE	canonical	3	533	junction_4	45.5174691739336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGAAAGTGCTTTCTGG	NA	False	NA	NA	False	GATAAA	-5	NA	60213647	60186592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
Isoform_40949_14	chr2	-	1832	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	15	-41	15	41	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60711799	60583024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
Isoform_4095_27	chr10	+	2172	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-32	-117	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGGGAGGGCTTTTGTTG	NA	False	NA	1	True	AATAAA	-12	NA	128541016	128555990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_40953_4	chr2	-	2062	15	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	-66	41	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	91.0514824095665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60793602	60583024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
Isoform_40958_17	chr2	-	1798	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	1	41	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60711813	60583024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
Isoform_4096_47	chr10	+	2018	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	112	0	-112	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGGCTTTTGTTGCTGTT	NA	False	NA	6	True	AATAAA	-17	NA	128542126	128555995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
Isoform_40960_4	chr2	-	3321	25	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	793	1640	421	-1640	3prime_fragment	FALSE	canonical	3	167	junction_12	33.8549807594425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTTTGTGTTATTAT	NA	False	NA	-37	True	ATTAAA	-41	NA	62241782	62162056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558
Isoform_40962_15	chr2	-	3377	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	331	1560	-41	-1560	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATGGGTTATGTCTTG	NA	False	NA	-4	True	AGTAAA	-19	NA	62242244	62161976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_40965_5	chr2	-	3481	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	226	1561	16	-1561	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAATGGGTTATGTCTT	NA	False	NA	-5	True	AGTAAA	-18	NA	62242349	62161977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_40968_3	chr2	-	3707	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	-2	1563	-2	-1563	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTAATGGGTTATGTC	NA	False	NA	-7	True	AGTAAA	-16	NA	62242577	62161979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
Isoform_4097_5	chr10	+	1211	4	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	137.41502424731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583757	128602430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128583868_128586151_128586207_128601015_128601110_128601478
Isoform_40974_8	chr2	-	1992	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	-14	8	-14	-8	multi-exon	FALSE	canonical	1	2	junction_8	3.05182068075037	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGACTCGTGTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	64853140	64742827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
Isoform_40975_3	chr2	-	1233	6	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-37	57560	-12	-11087	5prime_fragment	FALSE	canonical	2	9	junction_3	7.79743547584717	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTGAATTGCATCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	66086973	66072546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
Isoform_40976_4	chr2	-	1546	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	-19	0	3	0	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036498	69024238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
Isoform_40978_6	chr2	-	4329	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-21	-2956	-21	2956	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTCCCAACTTGAAA	NA	False	NA	-1	True	AATAAA	-15	NA	69036559	69021282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_40979_163	chr2	-	1338	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	14	0	0	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036524	69024238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
Isoform_4098_87	chr10	+	1159	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	0	-1	0	0	multi-exon	FALSE	canonical	3	275	junction_1	26	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128583757	128602433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128583868_128601015_128601110_128601478
Isoform_40983_3	chr2	-	4414	25	FSM	ENSMUSG00000027070.15	ENSMUST00000100051.9	4359	25	-56	1	-20	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.25761568939888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCTCATTAATATCTC	NA	False	NA	NA	False	AATAAA	-14	NA	69416429	69336548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69337101_69338108_69338226_69338311_69338432_69339476_69339723_69340686_69340969_69341273_69341412_69343590_69343722_69344480_69344607_69346734_69346928_69348652_69348857_69350257_69350399_69352062_69352266_69353489_69353697_69354264_69354489_69355504_69355675_69357859_69357989_69363796_69363917_69365252_69365403_69366328_69366446_69367858_69367973_69368294_69368406_69379283_69379401_69381173_69381297_69382696_69382805_69416158
Isoform_40984_32	chr2	-	3759	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-904	10	6	-10	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAATGACTATGGC	7061	False	NA	NA	False	NA	NA	NA	69543854	69517168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
Isoform_40986_202	chr2	-	935	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	14	19	3	1	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTACTTGTCTCTAG	6820	False	NA	-24	True	AATAAA	-15	NA	69715945	69701560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_40988_25	chr2	-	877	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	-7	-19	0	3	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTCTTTTCTTATG	6817	False	NA	-2	True	AATAAA	-37	NA	69715948	69701538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
Isoform_40989_5	chr2	-	891	6	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	228.92933407495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTACTTGTCTCTAG	6812	False	NA	-24	True	AATAAA	-15	NA	69715953	69701560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_69701661_69702075_69702126_69709445_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_4099_15	chr10	+	1100	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	61	-5	-12	0	multi-exon	FALSE	canonical	3	93	junction_1	117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128584384	128602433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128584436_128601015_128601110_128601478
Isoform_40991_4	chr2	-	2084	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	10	-4	3	4	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAAGTACAG	6827	False	NA	NA	False	NA	NA	NA	69715938	69708087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
Isoform_40994_10	chr2	-	901	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	6	2765	-1	-2765	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGATTTTTCCTTGTG	6823	False	NA	NA	False	TATAAA	-27	NA	69715942	69710856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_69711293_69711640_69711756_69715592
Isoform_40995_3	chr2	-	3972	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-36	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	60.8990354667102	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGTAAAGACTGTGA	NA	False	NA	NA	False	AATAAA	-10	NA	70655777	70542762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579671_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
Isoform_40996_3	chr2	-	4067	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	211	2	-120	-2	multi-exon	TRUE	canonical	3	163	junction_17	29.5425886295749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTGAAAATTACACT	NA	False	NA	NA	False	AATAAA	-20	NA	70655861	70542752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
Isoform_40997_8	chr2	-	2116	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885927	70794907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
Isoform_40998_55	chr2	-	2340	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	4	3	4	-3	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885923	70794907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
Isoform_40999_3	chr2	-	2864	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	416	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCATGGAGTTGGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	71164438	71104617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
Isoform_41_161	ERCC-00043	+	1005	1	FSM	ERCC-00043A	DQ516787	1007	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	2	1007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00043_+_0_1000
Isoform_41000_17	chr2	-	2393	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-55	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164438	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
Isoform_41001_6	chr2	-	2373	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5285	-55	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	37.8665419598886	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164469	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164435
Isoform_41002_3	chr2	-	2631	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5583	-55	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	39.6401292095523	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71168793	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71168501
Isoform_41003_4	chr2	-	2432	18	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-61	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_16	41.686837101695	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAATTCATTCTCCTC	NA	False	NA	-13	True	AATAAA	-8	NA	71164438	71105094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71163948_71164065_71164384
Isoform_41004_3	chr2	-	2609	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5230	-55	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	45.2950887153165	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164414	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160179_71160375_71163948_71164065_71164384
Isoform_41006_3	chr2	-	2449	17	NIC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-10	-55	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	36.5893064125299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71178182	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71178111
Isoform_41007_23	chr2	-	2468	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	195	3688	-21	-61	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAATTCATTCTCCTC	NA	False	NA	-13	True	AATAAA	-8	NA	71197898	71105094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
Isoform_41008_6	chr2	-	2949	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	195	3207	-21	420	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71197898	71104613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
Isoform_41009_58	chr2	-	2289	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-55	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71164438	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
Isoform_4101_174	chr10	+	3022	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	2	1109	2	647	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATCTTCCTTCTCTTCT	4018	False	NA	NA	False	TATAAA	-16	NA	128641424	128654019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_41010_11	chr2	-	2764	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	420	at_least_one_novel_splicesite	TRUE	canonical	3	57	junction_15	22.4311291636323	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164438	71104613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
Isoform_41011_17	chr2	-	2284	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5302	-57	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	28.2830141408035	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCATTCTCCTCCTGA	NA	False	NA	-9	True	AATAAA	-12	NA	71164486	71105090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164435
Isoform_41012_7	chr2	-	2547	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5563	-55	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	30.983436435188	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTCTCCTCCTGATG	NA	False	NA	-7	True	AATAAA	-14	NA	71168813	71105088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71168501
Isoform_41014_23	chr2	-	3898	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-22	-6	-22	2	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTAGTCCGATGCA	4023	False	NA	0	True	AATAAA	-24	NA	72809652	72766989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
Isoform_41019_11	chr2	-	4123	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-35	-218	-35	-7	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAGCTTGAAAAAGT	4010	False	NA	-19	True	ATTAAA	-18	NA	72809665	72766777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
Isoform_41025_10	chr2	-	3989	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-34	226	-34	-1	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	2851	False	NA	-7	True	AATAAA	-17	NA	72810824	72766996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
Isoform_41028_3	chr2	-	4126	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-27	82	-27	-82	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGTGTATAGAGGTG	2858	False	NA	-8	True	AATAAA	-13	NA	72810817	72766852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
Isoform_4103_10	chr10	+	3815	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	-788	1106	704	650	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	3228	False	NA	NA	False	TATAAA	-19	NA	128640634	128654022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_41033_3	chr2	-	1862	3	ISM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	234	9740	234	4	5prime_fragment	FALSE	canonical	3	322	junction_2	42.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGCCC	4279	False	NA	NA	False	NA	NA	NA	72809396	72776735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_72777083_72800498_72801859_72809241
Isoform_41037_101	chr2	-	1736	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	35	404	0	-3	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCCTTGGTGTGTTT	NA	False	NA	-8	True	AATAAA	-11	NA	73044756	72923548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_41038_25	chr2	-	2140	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	35	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	73044756	72923144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_41039_21	chr2	-	1766	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	5	404	5	-3	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCCTTGGTGTGTTT	NA	False	NA	-8	True	AATAAA	-11	NA	73044786	72923548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_41044_7	chr2	-	929	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	-31	7	-31	-7	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGGTTGCGTGTTTTG	NA	False	NA	-8	True	AATAAA	-12	NA	73044708	72967877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
Isoform_41047_6	chr2	-	818	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	1	55	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACACAAGAAACGT	NA	False	NA	NA	False	NA	NA	NA	73142910	73115305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
Isoform_41050_15	chr2	-	290	3	ISM	ENSMUSG00000041777.13	ENSMUST00000136519.3	1113	9	27	21841	27	-21841	5prime_fragment	FALSE	canonical	3	68	junction_1	10	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTACCCGCCTCGTTTCC	NA	False	NA	NA	False	NA	NA	NA	73142884	73137201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_73137273_73140800_73140896_73142760
Isoform_41051_11	chr2	-	2106	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	259	1685	-20	-9	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAAACACTAATAGCT	NA	False	NA	50	True	ATTAAA	-14	NA	73605431	73442688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
Isoform_41056_6	chr2	-	4223	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-71	-1756	2	-1	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTGTTTTTAATCTG	NA	False	NA	0	True	AATAAA	-25	NA	73722970	73646853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_41060_5	chr2	-	3862	13	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	-6	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	108.680213879477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTATAATTTGCT	NA	False	NA	-13	True	AATAAA	-12	NA	73722944	73646866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_73648081_73648108_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_41061_3	chr2	-	1709	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	2	224	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCACTCTTCCCACTTC	NA	False	NA	NA	False	AATAAA	-13	NA	73722935	73648941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
Isoform_41068_459	chr2	-	697	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	25	1	-9	-1	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTGTGATTTGTAC	NA	False	NA	-22	True	ATTAAA	-14	NA	73741644	73738791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
Isoform_41070_1167	chr2	-	687	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	26	1	-9	-1	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTGTGATTTGTAC	NA	False	NA	-22	True	ATTAAA	-14	NA	73741644	73738791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
Isoform_41074_5	chr2	-	3168	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	20	7	3	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAAGATGTGTTTATTT	NA	False	NA	-21	True	ATTAAA	-36	NA	74409272	74350684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
Isoform_41075_365	chr2	-	2345	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	125	5	-27	-5	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTGGACTTTTTGA	NA	False	NA	-4	True	AATAAA	-17	NA	75534860	75505861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
Isoform_41076_179	chr2	-	2376	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	94	5	-58	-5	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTGGACTTTTTGA	NA	False	NA	-4	True	AATAAA	-17	NA	75534891	75505861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
Isoform_4108_16	chr10	+	3039	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-103	1293	-10	650	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4035	False	NA	NA	False	TATAAA	-19	NA	128641441	128654022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_41089_45	chr2	-	655	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
Isoform_41090_19	chr2	-	600	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCACTCGTGCGTTATG	NA	False	NA	-6	True	AATAAA	-23	NA	76190775	76184292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_76184581_76186423_76186617_76190656
Isoform_41091_30	chr2	-	1576	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-2	40	-2	-40	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGCTCTGCTCATTTT	NA	False	NA	-5	True	NA	NA	NA	76478361	76460281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
Isoform_41092_9	chr2	-	821	6	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-2	6846	-2	51	5prime_fragment	FALSE	canonical	3	42	junction_4	3.65513337649941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCCTTCATTTCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	76478361	76467087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
Isoform_41093_5	chr2	-	903	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	-45	2	1	-2	multi-exon	FALSE	canonical	3	16	junction_2	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTTTGCAAATCTGA	NA	False	NA	-15	True	AATAAA	-24	NA	76503459	76493389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
Isoform_41094_3	chr2	-	896	4	NNC	ENSMUSG00000002732.15	novel	860	4	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	14.7271480229163	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTGTTTTGCAAATCT	NA	False	NA	-17	True	AATAAA	-22	NA	76503457	76493391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_76493697_76496020_76496152_76502040_76502193_76503149
Isoform_41096_7	chr2	-	3011	18	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	-14	20571	4	82	5prime_fragment	TRUE	canonical	3	17	junction_6	6.20190840145751	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGAAAGTTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	77000975	76860909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
Isoform_41098_5	chr2	-	2063	12	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	-10	39561	8	-4585	5prime_fragment	FALSE	canonical	3	25	junction_4	5.66269509178089	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTTTTGTAGATATTAT	NA	False	NA	9	True	AATAAA	-28	NA	77000971	76879899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
Isoform_41099_4	chr2	-	3389	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-193	-476	-193	476	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCTTTTATGTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	77111129	77016422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
Isoform_41100_13	chr2	-	2910	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-179	-11	-179	11	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTAGTTACGTCCTGC	NA	False	NA	NA	False	AATAAA	-25	NA	77111115	77016887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
Isoform_41103_13	chr2	-	3165	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	192	114	0	-1	multi-exon	FALSE	canonical	3	27	junction_20	67.1203955590251	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776527	77726110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
Isoform_41104_7	chr2	-	3279	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	-5	114	-5	-1	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776702	77726110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_41105_11	chr2	-	3101	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	170	117	0	-2	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	77776527	77726113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_41106_5	chr2	-	3166	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_20	70.3935188778058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	77776528	77726113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77776493
Isoform_41107_5	chr2	-	3304	20	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	102	junction_18	49.445736787175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATCATTGTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	77776728	77726114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_41108_5	chr2	-	3107	20	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	3	102	junction_18	49.445736787175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776527	77726110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_41109_8	chr2	-	3146	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	1	-1	combination_of_known_junctions	TRUE	canonical	3	27	junction_20	72.1889707642379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776526	77726110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
Isoform_41110_9	chr2	-	3092	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	164	-1	0	-1	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTCTTTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77776533	77726110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
Isoform_41111_11	chr2	-	3084	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	2	4	-1	-2	multi-exon	FALSE	canonical	3	78	junction_1	57.3448044097962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	77776525	77726113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
Isoform_41113_27	chr2	-	4303	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	159	7	159	-1	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411449	80330862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
Isoform_41115_16	chr2	-	4340	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	114	15	114	-9	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACACCTTGAATGATT	NA	False	NA	-15	True	AATAAA	-10	NA	80411494	80330870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
Isoform_41116_11	chr2	-	4477	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-18	10	-18	-4	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGAATGATTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	80411626	80330865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
Isoform_41119_17	chr2	-	1320	9	FSM	ENSMUSG00000027082.16	ENSMUST00000028487.10	1492	9	174	-2	174	2	multi-exon	FALSE	canonical	3	41	junction_8	57.5972004527998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCATGTTGACTGTCCCC	NA	False	NA	-5	True	AATAAA	-16	NA	84304344	84263201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286
Isoform_41120_6	chr2	-	1580	10	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	79.6129526033435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307107	84263199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84307034
Isoform_41121_4	chr2	-	1670	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	89.6026785313921	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307107	84263200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307034
Isoform_41122_4	chr2	-	1456	10	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.5367794209961	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307107	84263200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84307084
Isoform_41123_42	chr2	-	1337	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307107	84263199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
Isoform_41124_61	chr2	-	1299	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTTGACTGTCCCCCT	NA	False	NA	-3	True	AATAAA	-18	NA	84307119	84263199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
Isoform_41125_3	chr2	-	2435	5	ISM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	41745	2	657	-2	3prime_fragment	FALSE	canonical	3	171	junction_3	51.1486803348825	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	3802	False	NA	-40	True	AATAAA	-14	NA	84439364	84431128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303
Isoform_41126_3	chr2	-	5351	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	62.0501589218128	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481079	84431126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454902_84480747
Isoform_41129_690	chr2	-	653	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	85	9	-9	-3	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGGAGCAAGTTTAAA	381	False	NA	-17	True	AATAAA	-16	NA	84501029	84499567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
Isoform_41132_111	chr2	-	617	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	35	2	3	-2	multi-exon	FALSE	canonical	3	329	junction_1	946.216677088287	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGGAGCAAGTTTAAAT	393	False	NA	-16	True	AATAAA	-17	NA	84501017	84499566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
Isoform_41133_48	chr2	-	643	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	10	1	-1	-1	multi-exon	FALSE	canonical	3	329	junction_1	946.216677088287	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAGCAAGTTTAAATT	368	False	NA	-15	True	AATAAA	-18	NA	84501042	84499565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
Isoform_41136_990	chr2	-	1987	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5281	False	NA	-8	True	AATAAA	-16	NA	84508410	84501660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
Isoform_41144_55	chr2	-	1860	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	66	0	-3	0	multi-exon	FALSE	canonical	3	107	junction_5	582.842865235181	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5295	False	NA	-7	True	AATAAA	-17	NA	84508396	84501659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
Isoform_41147_58	chr2	-	1848	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	1	-11	-1	multi-exon	FALSE	canonical	3	238	junction_1	30.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTATGATTCTTTTTT	NA	False	NA	-22	True	AATAAA	-16	NA	84557631	84553466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84554562_84555872_84556501_84557506
Isoform_41149_3	chr2	-	2184	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	-335	-11	335	multi-exon	FALSE	canonical	3	238	junction_1	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-34	NA	84557631	84553130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84554562_84555872_84556501_84557506
Isoform_41150_25	chr2	-	1827	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	516	-27	240	27	3prime_fragment	FALSE	canonical	3	78	junction_3	14.4270194041905	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGTACTAGTTCCC	NA	False	NA	1	True	AATAAA	-28	NA	84605232	84595703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
Isoform_41151_4	chr2	-	1816	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	-27	-21	13	21	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGCCTCTGTGTACTA	NA	False	NA	-5	True	AATAAA	-22	NA	84605775	84595709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
Isoform_41152_13	chr2	-	621	3	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6947	-6	6947	6	3prime_fragment	FALSE	canonical	3	139	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGTTTGCCAGGTCT	4716	False	NA	-13	True	AATAAA	-25	NA	84646049	84641513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84641884_84645634_84645787_84645950
Isoform_41154_10	chr2	-	1026	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6374	0	6374	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4143	False	NA	-19	True	AATAAA	-19	NA	84646622	84641519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
Isoform_41155_13	chr2	-	797	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6603	0	6603	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4372	False	NA	-19	True	AATAAA	-19	NA	84646393	84641519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
Isoform_41156_13	chr2	-	889	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6509	2	6509	-2	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATGTGTGGCAGTTTG	4278	False	NA	-21	True	AATAAA	-17	NA	84646487	84641521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
Isoform_41157_4	chr2	-	859	5	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	5603	0	5603	0	3prime_fragment	FALSE	canonical	3	6	junction_4	55.2222781130949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	3372	False	NA	-19	True	AATAAA	-19	NA	84647393	84641519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321
Isoform_41158_3	chr2	-	1654	8	FSM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	104	3	104	-3	multi-exon	FALSE	canonical	2	2	junction_5	63.4909603078763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCATGTGTGGCAGTTT	NA	False	NA	-22	True	AATAAA	-16	NA	84652892	84641522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321_84647368_84647467_84647601_84648619_84649255_84652836
Isoform_41159_5	chr2	-	2236	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	-320	-613	-320	613	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGTAAGATTTTTT	9989	False	NA	NA	False	ATTAAA	-15	NA	84717374	84701654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_84703040_84710731_84711214_84717005
Isoform_4116_1081	chr10	+	893	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	29	-4	-9	-3	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTGTTTTATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128657791	128713490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_41160_4	chr2	-	2170	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	87327473	87319430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
Isoform_41162_225	chr2	-	948	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	106	-8	-19	6	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735065	90724971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
Isoform_41163_12	chr2	-	2760	5	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	-19	6	intron_retention	FALSE	canonical	3	1877	junction_4	26.2963875846094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735065	90724971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90734833_90734927
Isoform_41164_8	chr2	-	901	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	278	-139	3	intron_retention	FALSE	canonical	3	356	junction_2	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748152	90741334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_90741664_90744327_90744520_90747772
Isoform_41165_4	chr2	-	1177	3	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	2	-139	-2	intron_retention	FALSE	canonical	3	356	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGACTCCCCTCA	NA	False	NA	-3	True	AATAAA	-24	NA	90748152	90741058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_90741664_90744327_90744520_90747772
Isoform_41166_19	chr2	-	1322	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	False	NA	-1	True	AATAAA	-26	NA	90748395	90741056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_41167_63	chr2	-	801	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	278	-139	3	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748152	90741334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_41168_46	chr2	-	1010	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	28	278	28	3	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGTCTGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	90748361	90741334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_41170_29	chr2	-	1077	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	2	-139	-2	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGACTCCCCTCA	NA	False	NA	-3	True	AATAAA	-24	NA	90748152	90741058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_41173_4	chr2	-	1362	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-46	0	-46	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	False	NA	-1	True	AATAAA	-26	NA	90748435	90741056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
Isoform_41175_15	chr2	-	2378	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	91	0	-28	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	0	True	AATAAA	-15	NA	90900671	90892135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
Isoform_41177_5	chr2	-	2423	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	-51	-1081	-36	-2	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCTCTTCCACATACTA	4250	False	NA	-2	True	AATAAA	-13	NA	90900679	90892137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
Isoform_41178_7	chr2	-	2276	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_5	17.0105665690476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	0	True	AATAAA	-15	NA	90900671	90892135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90899085_90900499
Isoform_4118_26	chr10	+	813	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-9	-7	combination_of_known_splicesites	FALSE	canonical	3	355	junction_8	1412.89957529774	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	128657791	128713479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
Isoform_41180_23	chr2	-	1817	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	51	-311	-24	27	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGACCTGGTAAGAGTG	3048	False	NA	1	True	ACTAAA	-37	NA	91067276	91041889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
Isoform_41182_3	chr2	-	2165	8	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	10	3	intron_retention	FALSE	canonical	3	12	junction_6	30.9970373831212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACCCAAAAGCCCAAC	3029	False	NA	-39	True	AATAAA	-22	NA	91067295	91041929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91064452_91065297_91067034
Isoform_41183_19	chr2	-	1601	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-38	414	0	0	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	False	NA	-7	True	AATAAA	-18	NA	91275025	91108588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
Isoform_41184_6	chr2	-	1863	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	501	0	482	0	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAGTGTGCCCAATGC	NA	False	NA	NA	False	AATAAA	-15	NA	91466258	91455664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
Isoform_41185_4	chr2	-	1995	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	371	-2	352	2	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGCCCAATGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	91466388	91455662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
Isoform_41186_4	chr2	-	3714	4	FSM	ENSMUSG00000075040.10	ENSMUST00000111333.2	3740	4	24	2	-7	-2	multi-exon	FALSE	canonical	3	9	junction_3	6.54896090146283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	91480112	91474034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495
Isoform_41187_15	chr2	-	3463	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	-12	18	0	1	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGACAAAAGC	NA	False	NA	NA	False	NA	NA	NA	91480136	91474031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
Isoform_41188_11	chr2	-	3633	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	-36	7	21	-7	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	False	NA	-8	True	AATAAA	-12	NA	91540900	91504970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_41190_4	chr2	-	3483	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-115	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91536194	91504969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
Isoform_41192_150	chr2	-	3528	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	21	2	21	-1	multi-exon	TRUE	canonical	3	217	junction_4	20.2170445141937	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91540900	91504964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_41196_13	chr2	-	3483	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-17	-6	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91540938	91504969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
Isoform_4120_367	chr10	+	890	11	NIC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTGTTTTATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128657791	128713490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_41200_26	chr2	-	956	4	ISM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	-29	22	-18	1	intron_retention	FALSE	canonical	3	2268	junction_3	242.697342383472	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762062	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716
Isoform_41203_158	chr2	-	871	5	FSM	ENSMUSG00000027239.15	ENSMUST00000090602.6	714	5	-18	-139	-18	1	multi-exon	FALSE	canonical	3	492	junction_4	939.630878324036	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762062	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761878
Isoform_41205_49	chr2	-	778	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	-29	22	-18	1	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762062	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
Isoform_41206_611	chr2	-	728	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	46	-1	-35	1	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762079	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
Isoform_41207_14	chr2	-	822	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	-48	-1	-48	1	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762173	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
Isoform_41209_23	chr2	-	739	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	316	-1	-201	1	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762326	91760171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
Isoform_41213_112	chr2	-	3480	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	101	3	101	-2	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91793901	91763173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41214_47	chr2	-	3579	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	3	2	3	-1	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91793999	91763172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41215_13	chr2	-	3638	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	-56	2	-56	-1	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91794058	91763172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41216_4	chr2	-	3528	31	FSM	ENSMUSG00000040479.13	ENSMUST00000239257.2	3393	31	-138	3	-138	-2	multi-exon	FALSE	canonical	2	7	junction_30	54.3341104238908	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91796083	91763173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
Isoform_41218_4	chr2	-	3977	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	-470	5	-470	-2	multi-exon	FALSE	canonical	3	27	junction_30	51.2884652399218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91806679	91763173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
Isoform_41219_3	chr2	-	3627	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.420981977754	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91793954	91763173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767116_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771477_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41220_56	chr2	-	3489	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	101	1	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_9	44.504232008503	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793901	91763167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41221_11	chr2	-	3550	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_9	44.504232008503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793965	91763170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
Isoform_41222_20	chr2	-	2441	15	FSM	ENSMUSG00000040434.17	ENSMUST00000176774.8	2377	15	-64	0	7	0	multi-exon	FALSE	canonical	0	0	junction_10	41.8854731039636	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201395	92195390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
Isoform_41224_4	chr2	-	2458	14	ISM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	71	3	0	2	intron_retention	FALSE	canonical	0	0	junction_10	36.163337542994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGAGTGTTTTGTC	NA	False	NA	-3	True	GGGGCT	-45	NA	92201331	92195393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083
Isoform_41225_157	chr2	-	2430	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	13	2	-8	-1	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTCT	NA	False	NA	-2	True	NA	NA	NA	92201389	92195392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_41226_4	chr2	-	2598	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_9	20.7327314612946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201363	92195396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_41227_3	chr2	-	2746	13	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	7	-1	intron_retention	FALSE	canonical	3	81	junction_9	19.1664855063902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATGTGTGAGTGTTT	NA	False	NA	-7	True	GGGGCT	-41	NA	92201395	92195397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_41228_3	chr2	-	2337	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	48.3013224609771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201402	92195396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
Isoform_41229_25	chr2	-	2303	14	FSM	ENSMUSG00000040434.17	ENSMUST00000090582.11	2291	14	6	-18	1	-1	multi-exon	FALSE	canonical	0	0	junction_9	42.5506311706155	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATGTGTGAGTGTTT	NA	False	NA	-7	True	GGGGCT	-41	NA	92201372	92195397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
Isoform_4123_67	chr10	+	935	12	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	128657791	128713479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_41230_30	chr2	-	2620	10	ISM	ENSMUSG00000027223.16	ENSMUST00000111279.9	3274	12	3426	-2	3426	2	3prime_fragment	FALSE	canonical	3	69	junction_2	10.4822012578407	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	-4	True	ATTAAA	-20	NA	92219650	92214018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319
Isoform_41231_73	chr2	-	2987	12	FSM	ENSMUSG00000027223.16	ENSMUST00000050312.3	2930	12	-51	-6	-51	2	multi-exon	FALSE	canonical	3	50	junction_10	15.2158030073021	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	-4	True	ATTAAA	-20	NA	92231659	92214018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
Isoform_41232_21	chr2	-	3966	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	7	3	0	-3	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTTGTGTAATCTA	NA	False	NA	NA	False	TATAAA	-21	NA	92264381	92233993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
Isoform_41234_34	chr2	-	3074	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	56	9	-29	-6	multi-exon	FALSE	canonical	3	54	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAAGATACAGC	NA	False	NA	NA	False	AATAAA	-15	NA	92290083	92283117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92285120_92289011
Isoform_41235_28	chr2	-	3105	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	18	16	18	-13	multi-exon	FALSE	canonical	3	54	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAACAAACAAG	NA	False	NA	NA	False	AATAAA	-8	NA	92290121	92283124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_92285120_92289011
Isoform_41236_20	chr2	-	1303	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	-42	2490	-24	-3	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	93164874	93034594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
Isoform_41237_13	chr2	-	1791	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	31	2	-28	-2	multi-exon	TRUE	canonical	2	9	junction_8	1.4229164972073	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTCTGAAGAGGCGG	NA	False	NA	NA	False	ATTAAA	-15	NA	93292816	93249457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
Isoform_41239_13	chr2	-	3051	16	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-5	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	164.700725222717	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652903	93525977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93651954_93652027_93652731
Isoform_41240_9	chr2	-	2986	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	155.373562350713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTGTCTAGAATGC	NA	False	NA	-15	True	ATTAAA	-15	NA	93652912	93525979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
Isoform_41241_77	chr2	-	2938	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	124.260444885995	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652910	93525977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
Isoform_41242_576	chr2	-	2867	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	0	4	0	-4	multi-exon	FALSE	canonical	3	390	junction_9	31.3157237855525	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTGTCTAGAATGC	NA	False	NA	-15	True	ATTAAA	-15	NA	93652913	93525979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_41243_25	chr2	-	2774	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-3	-2	combination_of_known_splicesites	TRUE	canonical	3	30	junction_1	114.321519068906	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652901	93525977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_41245_9	chr2	-	2487	13	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	3	7303	0	22	5prime_fragment	FALSE	canonical	3	390	junction_8	29.4206796129676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTAGTTAACTGTCTGT	NA	False	NA	NA	False	AATATA	-39	NA	93652910	93533278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
Isoform_41247_20	chr2	-	3041	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-235	0	intron_retention	FALSE	canonical	1	2	junction_14	23.4539279161056	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699737	93685706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
Isoform_41248_41	chr2	-	2436	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	-213	1	-213	0	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699715	93685706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
Isoform_4125_28	chr10	+	932	12	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1539.19360662578	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	128657791	128713479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
Isoform_41251_63	chr2	-	2351	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61372	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93760874	93685706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
Isoform_41253_3	chr2	-	3217	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-213	-2	intron_retention	FALSE	canonical	1	2	junction_14	30.3497469982394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCAGGCCTGCTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	93699715	93685708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
Isoform_41254_4	chr2	-	2562	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61386	2	intron_retention	FALSE	canonical	2	7	junction_1	23.1600465263358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCCAGGCCTGCTTTA	NA	False	NA	-4	True	AATAAA	-19	NA	93760888	93685709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
Isoform_41255_14	chr2	-	1385	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATCCAAAAGCTTTT	8870	False	NA	-1	True	ATTAAA	-26	NA	93841080	93810975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
Isoform_41256_3	chr2	-	1472	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGAACATGTTTGTTC	8863	False	NA	79	True	AATACA	-23	NA	93841087	93810895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
Isoform_41257_35	chr2	-	1257	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-24	-5	0	-3	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATCCAAAAGCTTT	8851	False	NA	-2	True	ATTAAA	-25	NA	93841099	93810976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_41258_7	chr2	-	1166	9	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	40.6799628195504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTTGATCCAAAAGCT	8851	False	NA	-4	True	ATTAAA	-23	NA	93841099	93810978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
Isoform_41259_220	chr2	-	1833	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	62	7	7	6	multi-exon	TRUE	canonical	3	670	junction_5	45.0653969249135	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGTATTTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	93988247	93863040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
Isoform_41260_34	chr2	-	1892	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	3	7	3	6	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGTATTTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	93988306	93863040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
Isoform_41263_24	chr2	-	4569	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	16	5	6	-5	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTCCGTGGTGTAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94237018	94131116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_41264_4	chr2	-	3496	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	17	-105	8	105	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATCTAAATCCCTGCCT	NA	False	NA	NA	False	ATTAAA	-3	NA	94237016	94158176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_41265_25	chr2	-	3404	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	13	-9	4	9	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATAAAAAGAAAGTGATC	NA	False	NA	NA	False	NA	NA	NA	94237020	94158272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
Isoform_41267_163	chr2	-	3686	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	4	46	4	-46	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268477	94242072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_41272_29	chr2	-	989	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-41	1325	-22	18	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCGGCTGTATTCATTTG	NA	False	NA	-2	True	AATAAA	-33	NA	101459376	101392450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
Isoform_41273_37	chr2	-	3830	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	3	0	3	0	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016727	101780547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
Isoform_41274_4	chr2	-	2595	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-32	3049	-32	1326	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTGTAAGTGGACAG	NA	False	NA	NA	False	ACTAAA	-22	NA	102231277	102133512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
Isoform_41275_4	chr2	-	2473	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	-29	62	-29	-62	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGTAATCAAGTTTGT	NA	False	NA	NA	False	AATACA	-15	NA	102903887	102851481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_41276_134	chr2	-	1751	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38	717	-13	-717	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTGGTTCATTTG	NA	False	NA	0	True	ATTAAA	-16	NA	102903820	102852136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_41277_49	chr2	-	2469	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38	-1	-13	1	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATATGACATGCAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	102903820	102851418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_41282_10	chr2	-	1790	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	-3	719	-3	-719	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATGTTTGGTTCATT	NA	False	NA	-2	True	ATTAAA	-14	NA	102903861	102852138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_41284_4	chr2	-	1669	10	NIC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-13	-718	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	106.464391543213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGTTTGGTTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	102903820	102852137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102903634
Isoform_41285_4	chr2	-	1062	5	FSM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	-13	1029	-13	-1029	multi-exon	FALSE	canonical	3	362	junction_1	7.44983221287567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	102903820	102870992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
Isoform_41286_510	chr2	-	2416	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	43	154	8	-154	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACCGTGTTTGGTTGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	103315462	103284347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
Isoform_41287_176	chr2	-	2441	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	16	156	16	-156	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGACCGTGTTTGGTTGC	NA	False	NA	-11	True	AATAAA	-13	NA	103315489	103284349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
Isoform_41290_172	chr2	-	3804	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	73	2	0	-2	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591542	103551602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_41291_52	chr2	-	3856	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	21	2	-8	-2	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591594	103551602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_41296_4	chr2	-	1579	4	FSM	ENSMUSG00000027185.16	ENSMUST00000127581.8	1639	4	41	19	-16	-19	multi-exon	FALSE	canonical	3	307	junction_1	12.4721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACCTAATAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	103591565	103583383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103584576_103587513_103587606_103588015_103588139_103591393
Isoform_41315_724	chr2	-	4043	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	31	-5	31	5	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627418	103595357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_4132_1110	chr10	+	856	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	207	0	-16	0	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	1110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAGATGGTCTCA	561	False	NA	28	True	ATTAAA	-20	NA	128745774	128748684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
Isoform_41326_310	chr2	-	4072	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	25	2072	-25	5	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627969	103595357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
Isoform_41332_98	chr2	-	3445	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	76	2090	-55	-1	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAGTACTGGTGGAA	NA	False	NA	-10	True	NA	NA	NA	103627373	103597452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
Isoform_41334_46	chr2	-	3513	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	31	4167	-19	-1	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAGTACTGGTGGAA	NA	False	NA	-10	True	NA	NA	NA	103627963	103597452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
Isoform_41339_5	chr2	-	638	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	0	-8	0	8	multi-exon	FALSE	canonical	3	159	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104542511	104535286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_104535547_104536700_104536888_104542320
Isoform_41340_91	chr2	-	1727	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	70	4	70	-4	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTACTCAGAATGG	NA	False	NA	-13	True	AATAAA	-20	NA	104573153	104552132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
Isoform_41342_3	chr2	-	3614	3	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-236	32293	-236	-32293	5prime_fragment	FALSE	canonical	3	56	junction_1	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAAGCTAAAGGAAA	NA	False	NA	NA	False	AAAACA	-26	NA	104647341	104617432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_104620543_104625532_104625640_104646944
Isoform_41343_4	chr2	-	1889	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	135	848	135	-848	multi-exon	FALSE	canonical	1	4	junction_1	3.61109401705356	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCGGCACTCGATAC	NA	False	NA	NA	False	NA	NA	NA	104680086	104661933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
Isoform_41345_740	chr2	-	1244	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	37	2	0	1	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGACTAATCTAGCTAA	2677	False	NA	-18	True	AGTAAA	-15	NA	104847388	104830002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
Isoform_41347_441	chr2	-	2167	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-84	637	-84	1	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	105229748	105217272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_41348_613	chr2	-	2000	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	83	637	83	1	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	105229581	105217272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_41349_41	chr2	-	3007	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	51	-338	51	338	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTCTTTGGTCATGGT	NA	False	NA	-5	True	NA	NA	NA	105229613	105216297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_41350_33	chr2	-	3140	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-84	-336	-84	336	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGCTCTTTGGTCATG	NA	False	NA	-7	True	NA	NA	NA	105229748	105216299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
Isoform_41359_14	chr2	-	2987	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	64	-3	-17	3	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTCTTACCCTGTTG	NA	False	NA	-1	True	AATAAA	-33	NA	105734845	105531368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
Isoform_41362_81	chr2	-	1574	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	59	1415	-22	-1415	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTTTGCCTTAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	105734850	105532786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
Isoform_41365_27	chr2	-	898	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	292	7	6	-7	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGGTAAGAGTATTC	NA	False	NA	-6	True	TATAAA	-12	NA	105833602	105797060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_41366_5	chr2	-	1281	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	292	-376	6	376	multi-exon	TRUE	canonical	3	201	junction_2	6.37867541108654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAGTGTGAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	105833602	105796677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
Isoform_41371_4	chr2	-	3316	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	10	11	10	-11	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAATAATGCAGACTT	NA	False	NA	NA	False	AATAAA	-8	NA	106804759	106792882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_41373_16	chr2	-	1385	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTAATTTTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	106804741	106794765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_41375_5	chr2	-	3272	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATGCAGACTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	106804742	106792879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_41376_4	chr2	-	3853	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	6	-2	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGACTTACTGTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	106804736	106792873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_41377_4	chr2	-	1958	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	2	1	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATAAACTTTAATTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	106804740	106794772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
Isoform_41379_5	chr2	-	1934	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1	6	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTAATTTTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	106804741	106794767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
Isoform_41380_31	chr2	-	1882	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	10	2	0	1	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	109108625	108922643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
Isoform_41381_3	chr2	-	1913	6	NIC	ENSMUSG00000057234.10	novel	1894	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	109111071	108922642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
Isoform_41382_491	chr2	-	957	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	15	11	8	-11	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTAATGTTTCACAAGT	5012	False	NA	-16	True	AATAAA	-18	NA	112198357	112193366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
Isoform_41386_3	chr2	-	3648	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-58	1368	-53	347	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCAAGTGCTGGTGTGT	5959	False	NA	NA	False	AATAAA	-22	NA	113679059	113663258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
Isoform_41387_3	chr2	-	5032	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-21	-53	-16	-1	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCTTGTCTGCGTGTTGT	5996	False	NA	-5	True	ATTAAA	-16	NA	113679022	113661837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
Isoform_41388_98	chr2	-	4851	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	33	4	-29	-4	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAAGGCATACTTGC	7842	False	NA	-7	True	ATTAAA	-15	NA	114005787	113931654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
Isoform_41392_28	chr2	-	2492	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	12	230	1	-6	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114485433	114347130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
Isoform_41393_25	chr2	-	2724	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	13	-3	2	-1	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGTGAATGTCAGT	NA	False	NA	-3	True	NA	NA	NA	114485432	114346897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
Isoform_41398_5	chr2	-	2856	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	40	-2098	-23	2098	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGTCTTGTGTGCTTG	NA	False	NA	NA	False	AGTAAA	-5	NA	118310152	118304232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
Isoform_41399_418	chr2	-	731	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	67	0	4	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310125	118306330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
Isoform_41400_11	chr2	-	4646	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	-11	7	-11	-7	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGATCTGTTCTTTATT	NA	False	NA	-6	True	AATAAA	-9	NA	118380179	118359244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
Isoform_41405_6	chr2	-	1467	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	14	-382	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859844	118848641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
Isoform_41407_13	chr2	-	1461	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	27	382	11	-382	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859847	118848641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
Isoform_41408_375	chr2	-	2175	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	75	-1	5	1	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	118987440	118967480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
Isoform_41409_54	chr2	-	2195	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	53	1	-17	-1	multi-exon	FALSE	canonical	3	215	junction_12	29.1989107483291	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTTTTGACTGTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	118987462	118967482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
Isoform_41411_107	chr2	-	1002	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	6	0	-6	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTACTTTTCTTC	NA	False	NA	-10	True	AATAAA	-9	NA	119039276	119002986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
Isoform_41412_15	chr2	-	1076	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	-74	6	-74	-6	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCTACTTTTCTTC	NA	False	NA	-10	True	AATAAA	-9	NA	119039350	119002986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
Isoform_41414_11	chr2	-	744	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	41	2	0	-2	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGGGAGTGTGGTGTGT	NA	False	NA	NA	False	GATAAA	-16	NA	119060346	119048601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
Isoform_41415_6	chr2	-	770	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	16	1	16	-1	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGAGTGTGGTGTGTA	NA	False	NA	NA	False	GATAAA	-17	NA	119060371	119048600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
Isoform_41416_4	chr2	-	801	5	NNC	ENSMUSG00000027317.9	novel	790	5	NA	NA	-336	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	15.337861650178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGGGAGTGTGGTGTGT	NA	False	NA	NA	False	GATAAA	-16	NA	119060723	119048601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022_119060323_119060642
Isoform_41418_15	chr2	-	1749	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6737	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	7.54247233265651	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTCTGTGGTCTCC	4268	False	NA	-6	True	AATAAA	-16	NA	119108490	119099682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119108411
Isoform_41419_4	chr2	-	1827	3	ISM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	98050	4	60043	-4	3prime_fragment	FALSE	canonical	3	56	junction_1	6	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAAAGTGTCTGTGGT	NA	False	NA	-4	True	AATAAA	-22	NA	119210118	119203526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_119205063_119207827_119208044_119210043
Isoform_41420_3	chr2	-	2202	6	ISM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	94781	2	56774	-2	3prime_fragment	FALSE	canonical	3	50	junction_4	6.49923072370877	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGTGTCTGTGGTCT	NA	False	NA	-2	True	AATAAA	-24	NA	119213387	119203524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344
Isoform_41421_4	chr2	-	958	6	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	-16	48621	-16	-18036	5prime_fragment	TRUE	canonical	3	19	junction_5	4.83321838943783	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATTTATTCTTTC	NA	False	NA	NA	False	AAAAAG	-32	NA	119308110	119281810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
Isoform_41422_6	chr2	-	2591	13	NNC	ENSMUSG00000048647.10	novel	6042	13	NA	NA	216	-2889	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.89087250997625	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGAGGTGTTACACTTC	NA	False	NA	NA	False	AGTAAA	-26	NA	119377459	119349880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_119350434_119350464_119351207_119354003_119354196_119355052_119355197_119359164_119359246_119359326_119359432_119360569_119360657_119363922_119363982_119369228_119369357_119369603_119369659_119370504_119370574_119371839_119372026_119377269
Isoform_41423_66	chr2	-	1564	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-20	-462	-20	3	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTTGT	7460	False	NA	NA	False	NA	NA	NA	119448970	119439989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
Isoform_41428_3	chr2	-	1437	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAATTT	7462	False	NA	NA	False	NA	NA	NA	119448968	119439991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
Isoform_41429_3	chr2	-	974	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTTTGCTTATGTAA	7461	False	NA	NA	False	NA	NA	NA	119448969	119440455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
Isoform_41430_9	chr2	-	1472	5	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	131.115407180087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493279	119485926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493073
Isoform_41432_43	chr2	-	1456	5	FSM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	0	-5	0	0	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493279	119485926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
Isoform_41434_4	chr2	-	1302	5	NIC	ENSMUSG00000027305.10	novel	1451	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	132.411055052061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCCTCAGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-17	NA	119493279	119485930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493239
Isoform_41435_44	chr2	-	1314	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-6	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493308	119485926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
Isoform_41436_3	chr2	-	1128	4	NIC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	130.10337769977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCAGCCTTTTTCTGC	NA	False	NA	-3	True	AATAAA	-19	NA	119493310	119485928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119486274_119486848_119486924_119490482_119491141_119493260
Isoform_41437_7	chr2	-	2420	15	ISM	ENSMUSG00000027297.16	ENSMUST00000028759.13	3080	20	1910	-7	0	1	3prime_fragment	FALSE	canonical	3	7	junction_14	8.0156097709407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGAGTGAATGTGGA	NA	False	NA	-3	True	NA	NA	NA	119589002	119581799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
Isoform_41438_19	chr2	-	2229	14	FSM	ENSMUSG00000027297.16	ENSMUST00000182203.3	2232	14	4	-1	0	-1	multi-exon	FALSE	canonical	3	10	junction_7	7.17243243134772	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCAGTTCTCTGAGTG	NA	False	NA	-11	True	NA	NA	NA	119589002	119581807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_41440_4	chr2	-	2264	14	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.68070123138613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCAGTTCTCTGAGTG	NA	False	NA	-11	True	NA	NA	NA	119588989	119581807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119582416_119582546_119582638_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
Isoform_41441_4	chr2	-	2091	13	NIC	ENSMUSG00000027297.16	novel	2240	14	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.17423929634859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCAGTTCTCTGAG	NA	False	NA	-13	True	NA	NA	NA	119589001	119581809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119582416_119582546_119582638_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_41442_5	chr2	-	2699	10	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	7	0	intron_retention	FALSE	canonical	3	14	junction_9	5.33333333333333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGTTCTCTGAGTGA	NA	False	NA	-10	True	NA	NA	NA	119588993	119581806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119582416_119582546_119583080_119583175_119583269_119583406_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
Isoform_4145_9	chr10	+	2493	13	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	485	1	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	74.2667863553793	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAAAGGTAAA	NA	False	NA	30	True	NA	NA	NA	127932733	127955195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138
Isoform_41455_5	chr2	-	4906	25	ISM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	intron_retention	FALSE	canonical	3	165	junction_24	62.6318470419713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
Isoform_41457_99	chr2	-	4789	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
Isoform_41458_88	chr2	-	4769	26	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	88.1886704741601	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
Isoform_41459_129	chr2	-	4712	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	29	3	-4	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
Isoform_41461_56	chr2	-	4692	25	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_24	80.8678191041818	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
Isoform_41463_172	chr2	-	3399	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	17	314	17	-314	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTCGTGAGTCTGTCT	NA	False	NA	-11	True	AATATA	-11	NA	119985070	119919969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
Isoform_41468_8	chr2	-	3710	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	21	-1	21	1	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCACAGTTCCTAGACT	NA	False	NA	NA	False	AATAAA	-21	NA	119985066	119919654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
Isoform_41472_6	chr2	-	4231	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	243	3	-10	-3	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGGTTCATCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120075573	119996895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
Isoform_41473_8	chr2	-	972	2	ISM	ENSMUSG00000046971.8	ENSMUST00000142183.2	2610	15	11172	9	11172	0	3prime_fragment	FALSE	canonical	2	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCACTGAGCCTGT	5920	False	NA	NA	False	AATAAA	-22	NA	120131686	120130446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120131110_120131377
Isoform_41474_4	chr2	-	1541	6	ISM	ENSMUSG00000046971.8	ENSMUST00000054651.8	3116	20	10723	-10	8935	1	3prime_fragment	FALSE	canonical	2	5	junction_5	3.9293765408777	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCCTGTGTTCTGGTTC	3683	False	NA	NA	False	AATAAA	-32	NA	120133923	120130436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547_120133656_120133733
Isoform_41477_10	chr2	-	4199	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	2	138	-2	-138	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183604	120147079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
Isoform_41479_3	chr2	-	360	4	ISM	ENSMUSG00000033808.17	ENSMUST00000143182.2	5125	7	3	13133	0	-13133	5prime_fragment	TRUE	canonical	3	432	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGCTTGTCTGGGAG	NA	False	NA	NA	False	AATAGA	-26	NA	120234559	120224917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120224957_120227842_120227929_120233190_120233252_120234385
Isoform_41482_8	chr2	-	6343	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-57	2799	-21	-5	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATGTGCAGTGTC	9764	False	NA	51	True	TTTAAA	-19	NA	120394345	120340099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_41483_3	chr2	-	9097	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-14	2	-7	-2	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9807	False	NA	-8	True	AATAAA	-19	NA	120394302	120337302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_41485_18	chr2	-	3942	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-6	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATGTGCAGTGT	9797	False	NA	50	True	TTTAAA	-18	NA	120394312	120340100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_41487_13	chr2	-	6740	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	1	-4	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9795	False	NA	-10	True	AATAAA	-17	NA	120394314	120337304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_41488_16	chr2	-	4405	10	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-34	19443	2	0	5prime_fragment	FALSE	canonical	3	679	junction_5	193.010522325585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9787	False	NA	-3	True	AATAAA	-43	NA	120394322	120356743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_41489_14	chr2	-	2047	8	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	389	junction_5	258.657365356298	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAAGTTTCATTGTTC	9775	False	NA	-6	True	AATAAA	-40	NA	120394334	120356746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
Isoform_4149_33	chr10	+	2480	13	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	497	3	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	39.5561310039291	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAAGGTAAAAG	NA	False	NA	32	True	NA	NA	NA	127932745	127955197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138
Isoform_41493_13	chr2	-	2777	5	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-40	26589	-4	-1523	5prime_fragment	FALSE	canonical	3	681	junction_1	204.702680734767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCCATTGTAGATGT	9781	False	NA	NA	False	ATTAAA	-38	NA	120394328	120363889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
Isoform_41496_58	chr2	-	1960	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	1	1	1	-1	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439835	120434719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
Isoform_41497_3	chr2	-	1888	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	-42	2	-2	-2	multi-exon	FALSE	canonical	1	2	junction_5	68.2800117164606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439838	120434720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
Isoform_41498_52	chr2	-	1801	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439835	120434719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
Isoform_41500_26	chr2	-	1792	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	168	1	3	-1	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439833	120434719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
Isoform_41501_14	chr2	-	4329	28	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_26	17.8771144441848	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
Isoform_41502_8	chr2	-	4332	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	16.0161955070022	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
Isoform_41503_5	chr2	-	3986	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-23	-870	5	870	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTAAGTGTCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	120680894	120575281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
Isoform_41504_4	chr2	-	2586	24	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	81	55129	-21	6037	5prime_fragment	FALSE	canonical	3	73	junction_12	7.35977931780602	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAGAAAACAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	120801115	120745878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
Isoform_41505_9	chr2	-	2616	23	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	33	56154	10	5012	5prime_fragment	FALSE	canonical	3	73	junction_11	7.49503968199707	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGAGTATCCTTTTCA	NA	False	NA	NA	False	AAAACA	-14	NA	120801163	120746903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
Isoform_41507_14	chr2	-	2617	3	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	-21	4948	-21	-503	5prime_fragment	FALSE	canonical	3	33	junction_1	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGTTTTTCATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	121001627	120996124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_120997200_120999679_120999885_121000290
Isoform_41509_4	chr2	-	3302	17	ISM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	3	21304	3	1	5prime_fragment	TRUE	canonical	3	115	junction_1	16.3868039516557	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGACAAAGAAAGAC	8075	False	NA	NA	False	NA	NA	NA	121101885	121046622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
Isoform_41510_3	chr2	-	5554	31	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	6	-1	combination_of_known_junctions	TRUE	canonical	3	47	junction_6	18.7459328922303	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGGGGTGTGACTCCTT	NA	False	NA	-6	True	AATAAA	-16	NA	121185805	121141042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_41511_6	chr2	-	1416	10	ISM	ENSMUSG00000033526.17	ENSMUST00000150081.8	2485	18	-19	6706	0	-16	5prime_fragment	FALSE	canonical	3	56	junction_9	18.8017598335769	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTAAAAGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	121185811	121177544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
Isoform_41512_3	chr2	-	1162	4	ISM	ENSMUSG00000033486.15	ENSMUST00000038073.5	2247	13	4	15378	4	493	5prime_fragment	FALSE	canonical	3	12	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	121244269	121240213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121240688_121240857_121241032_121242630_121242772_121243896
Isoform_41513_68	chr2	-	1687	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	-11	-2	-11	2	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCGATCATTAGCCT	NA	False	NA	-15	True	ATTAAA	-17	NA	121273093	121269505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
Isoform_41514_3	chr2	-	1744	10	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	70	junction_4	8.33259255966786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273077	121269507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
Isoform_41517_72	chr2	-	2591	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	47	724	47	-724	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	9242	False	NA	-7	True	AATAAA	-15	NA	121304501	121291439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
Isoform_41520_6	chr2	-	2758	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	65	539	65	-539	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAGCCACA	9260	False	NA	NA	False	NA	NA	NA	121304483	121291254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
Isoform_41526_6	chr2	-	3342	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	20	836	20	-836	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGATTTATTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	121337126	121323227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
Isoform_4153_36	chr10	+	3371	15	Fusion	ENSMUSG00000020250.12_ENSMUSG00000056821.14	novel	894	3	NA	NA	-62	0	multi-exon	FALSE	canonical	1	47	junction_2	264.185193238627	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82647894	82733546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr10_+_82647970_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
Isoform_41534_5	chr2	-	2577	2	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	15	8570	15	-8570	5prime_fragment	FALSE	canonical	3	409	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121337131	121330961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121333351_121336943
Isoform_41537_4	chr2	-	2121	15	NIC	ENSMUSG00000027238.18	novel	2222	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.04325043443386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121637551	121378787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_121379191_121379369_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
Isoform_41538_7	chr2	-	2293	14	FSM	ENSMUSG00000027238.18	ENSMUST00000110592.2	2222	14	-71	0	-6	0	multi-exon	FALSE	canonical	2	7	junction_6	7.44049371651923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121637544	121378787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
Isoform_41539_3	chr2	-	7344	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	53	274	-37	-274	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTTGAGTTGAAAAG	7032	False	NA	-9	True	AATAAA	-18	NA	121948814	121884274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
Isoform_4154_11	chr10	+	2123	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.89112761149	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCATGGACTTTAGTGT	NA	False	NA	25	True	NA	NA	NA	75399939	75422023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_41542_6	chr2	-	1813	6	FSM	ENSMUSG00000033396.14	ENSMUST00000135847.2	1813	6	-5	5	-5	-5	multi-exon	FALSE	canonical	3	87	junction_3	7.08237248385031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTCTTGTGTGTCTT	6985	False	NA	NA	False	NA	NA	NA	121948861	121938151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
Isoform_41544_23	chr2	-	1348	10	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60416	0	60416	0	3prime_fragment	FALSE	canonical	3	83	junction_9	15.8449275288675	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGTTGCCAGACTTT	NA	False	NA	0	True	AATAAA	-20	NA	121956254	121950588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
Isoform_41547_15	chr2	-	1465	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60064	7	60064	-7	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGCTTCCGTGTTGCC	NA	False	NA	-7	True	AATAAA	-13	NA	121956606	121950595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
Isoform_41549_11	chr2	-	1782	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	-230	5	-11	-5	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTTCCGAGCATCC	NA	False	NA	-16	True	TATAAA	-33	NA	122199629	122179378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
Isoform_4155_10	chr10	+	2131	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.650286311549	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75399939	75422034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
Isoform_41551_7	chr2	-	1367	6	NNC	ENSMUSG00000033256.15	novel	1431	6	NA	NA	-1036	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	49.9199358973947	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTTCCGAGCATCC	NA	False	NA	-16	True	TATAAA	-33	NA	122200679	122179378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122200592
Isoform_41552_3	chr2	-	1932	5	NIC	ENSMUSG00000033256.15	novel	1557	6	NA	NA	-11	0	intron_retention	TRUE	canonical	3	75	junction_4	29.1493996507647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199629	122179372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122199127
Isoform_41553_3	chr2	-	1802	9	FSM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	27	560	27	462	multi-exon	FALSE	canonical	2	6	junction_3	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAATAA	NA	False	NA	NA	False	AAAACA	-38	NA	122441757	122425507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
Isoform_41554_18	chr2	-	3009	16	NIC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	215.150634569261	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965546	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41556_42	chr2	-	2944	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965532	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41557_4	chr2	-	3091	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-12	121	intron_retention	FALSE	canonical	0	0	junction_12	185.119500841583	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGAGTCACTTCTTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	124965558	124929539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41559_57	chr2	-	2915	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965503	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_4156_45	chr10	+	609	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6367	False	NA	30	True	AATAAA	-21	NA	80128311	80129948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
Isoform_41562_5	chr2	-	2434	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-10	-533	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATTCTATTATTTC	NA	False	NA	1	True	ATTAAA	-18	NA	124965556	124930194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41565_4	chr2	-	2937	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965546	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41566_7	chr2	-	2892	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965501	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41568_61	chr2	-	2843	14	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965503	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_41569_29	chr2	-	2897	14	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965557	124929660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
Isoform_4157_21	chr10	+	1922	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4110	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977896	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80978088_80979795_80981052_80983803
Isoform_41573_3	chr2	-	6708	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	81	8	81	-8	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGAATTTCTGTGTTCT	385	False	NA	NA	False	AATAAA	-28	NA	125624709	125578913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
Isoform_41578_64	chr2	-	1925	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	144	4	1	-4	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGCTTGGTTCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	125700915	125673525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41579_28	chr2	-	3230	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	-1300	0	2	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125700916	125672221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_4158_12	chr10	+	2016	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4016	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977802	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80978088_80979795_80981052_80983803
Isoform_41580_9	chr2	-	3162	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	57	-1146	-19	-152	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTATTTTCTTC	NA	False	NA	74	True	AATAAA	-18	NA	125701002	125672375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41582_39	chr2	-	3074	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	-1144	0	-154	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATGTGTATTTTCT	NA	False	NA	72	True	AATAAA	-16	NA	125700916	125672377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41583_19	chr2	-	1993	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	76	4	0	-4	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGCTTGGTTCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	125700983	125673525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41584_3	chr2	-	3306	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	67	-1300	-9	2	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125700992	125672221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41586_45	chr2	-	1947	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	1302	0	-4	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGCTTGGTTCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	125700916	125673525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41587_10	chr2	-	2032	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	58	1302	-18	-4	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGCTTGGTTCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	125701001	125673525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41588_8	chr2	-	3256	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	137	-1	-6	1	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125700922	125672222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_41589_20	chr2	-	3097	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	152	0	-152	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTATTTTCTTC	NA	False	NA	74	True	AATAAA	-18	NA	125700916	125672375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
Isoform_4159_10	chr10	+	2361	7	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	158	590	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	264.853838098593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTTGGTATTTAGGG	5756	False	NA	13	True	AATAAA	-15	NA	108168139	108250691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_108168294_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
Isoform_41591_4	chr2	-	2655	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	-42	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517464	126470832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41592_10	chr2	-	2612	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	0	1	0	-1	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126517422	126470833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41593_82	chr2	-	2617	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	66	1470	0	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517422	126470831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41594_49	chr2	-	2648	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	35	1470	11	1	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517453	126470831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41595_5	chr2	-	1372	8	ISM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	-20	10107	-20	1	5prime_fragment	FALSE	canonical	3	55	junction_2	122.412484357318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTGAATGAGTGCAGAA	NA	False	NA	-16	True	NA	NA	NA	126517442	126480939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41596_5	chr2	-	1451	9	NIC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	161.744976738074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTGAATGAGTGCAGAA	NA	False	NA	-16	True	NA	NA	NA	126517420	126480939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
Isoform_41597_35	chr2	-	1360	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-16	-6	0	6	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTGCAGAATTTGT	NA	False	NA	-11	True	NA	NA	NA	126517422	126480934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41598_22	chr2	-	1401	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-58	-5	0	5	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGAGTGCAGAATTTG	NA	False	NA	-12	True	NA	NA	NA	126517464	126480935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
Isoform_41601_34	chr2	-	2047	16	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	-6	37709	-6	-6	5prime_fragment	FALSE	canonical	3	201	junction_10	20.8373596109381	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGGAAAGAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	126718156	126671193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
Isoform_41605_4	chr2	-	2600	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	168	2848	168	1025	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTCTGATCTT	8447	False	NA	NA	False	ATTAAA	-19	NA	126774987	126735158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_41607_5	chr2	-	2138	16	NNC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	174	604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.58836422143355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGTGTTTTGCCTGT	8453	False	NA	NA	False	AATAAA	-30	NA	126774981	126735579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_126736032_126736066_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_41608_3	chr2	-	2862	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	177	2577	177	1296	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTCCTTCTGCA	8456	False	NA	NA	False	NA	NA	NA	126774978	126734887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
Isoform_41609_412	chr2	-	2650	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	28	17	-24	1	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975846	126945745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
Isoform_4161_5	chr10	+	1539	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	5.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGGCTGCATTCACAA	NA	False	NA	NA	False	NA	NA	NA	61751902	61759355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_+_61752029_61757919_61759238_61759260
Isoform_41612_5	chr2	-	3689	2	FSM	ENSMUSG00000074825.5	ENSMUST00000110386.2	1898	2	-160	-1631	-24	-6	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGTATGAACTGGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	126985386	126980697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_126984135_126985134
Isoform_41614_7	chr2	-	2976	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	86	13	86	-13	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGGGGGCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	127089650	127082870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_41615_134	chr2	-	1397	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	59	1619	59	63	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAGCTTTTGAAATTGT	NA	False	NA	-21	True	AATATA	-21	NA	127089677	127084476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_41616_4	chr2	-	2623	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	59	393	59	-393	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTTTGTGACTCTAA	NA	False	NA	NA	False	NA	NA	NA	127089677	127083250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_41617_43	chr2	-	1419	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	89	1567	89	115	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTGTTTTATAAGTAAG	NA	False	NA	-17	True	NA	NA	NA	127089647	127084424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
Isoform_41619_41	chr2	-	1226	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	-15	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286485	127278134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
Isoform_4162_3	chr10	+	3413	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	384	-8	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	34.3374118308248	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGAACGGAGTTCGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	103204087	103255228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_41620_8	chr2	-	2721	6	NIC	ENSMUSG00000027371.11	novel	1211	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	84	junction_4	10.5754432531218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286476	127278134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282523_127283793_127284045_127286336
Isoform_41621_9	chr2	-	2929	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	-6	-1627	-6	-5	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGACTCTCTCCA	9622	False	NA	-4	True	AATAAA	-13	NA	127324425	127298422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
Isoform_41623_18	chr2	-	1154	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	35	107	35	3	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCAGTTTACTTC	9663	False	NA	-8	True	AATATA	-7	NA	127324384	127300156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
Isoform_41626_3	chr2	-	2988	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	12.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAATGAATACTGAAGT	NA	False	NA	-30	True	NA	NA	NA	127426596	127417463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424007_127426549
Isoform_41627_8	chr2	-	2765	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	1	-1	1	1	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTGAAGTGTCTC	NA	False	NA	-25	True	NA	NA	NA	127426596	127417458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
Isoform_41628_4	chr2	-	2740	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110366.8	4912	6	2407	877	-10	1	3prime_fragment	FALSE	canonical	0	0	junction_4	13.4536240470737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTGAAGTGTCTC	NA	False	NA	-25	True	NA	NA	NA	127426607	127417458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426585
Isoform_41629_96	chr2	-	2309	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	468	1	-8	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498147	127475146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
Isoform_4163_4	chr10	+	1079	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	381	-1787	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	41.1969355656461	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGTATCATTTATAGTA	NA	False	NA	3	True	ATTAAA	-16	NA	103204084	103231232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850
Isoform_41632_7	chr2	-	2527	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	250	1	-226	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498365	127475146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
Isoform_41633_10	chr2	-	2403	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	374	1	-102	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498241	127475146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
Isoform_41637_9	chr2	-	1993	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	9	4	9	-4	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	-2	True	AATAAA	-17	NA	127571843	127546309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
Isoform_41638_37	chr2	-	2291	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	6	-1	6	-1	multi-exon	FALSE	canonical	3	41	junction_11	13.7437973922422	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2797	False	NA	1	True	AATAAA	-17	NA	127630811	127582654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_41639_20	chr2	-	2270	20	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	-19	-1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_12	17.789940822269	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2815	False	NA	1	True	AATAAA	-17	NA	127630793	127582654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_4164_6	chr10	+	3280	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	399	2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	33.5120553120764	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTGTCCCTCATTGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	103204102	103255240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
Isoform_41640_22	chr2	-	2294	20	FSM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	-37	3	6	-1	multi-exon	FALSE	canonical	3	19	junction_11	16.3928570350886	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2797	False	NA	1	True	AATAAA	-17	NA	127630811	127582654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_41641_4	chr2	-	2290	20	NNC	ENSMUSG00000027378.17	novel	2260	20	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	19.8002490261068	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2798	False	NA	1	True	AATAAA	-17	NA	127630810	127582654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
Isoform_41642_189	chr2	-	430	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	12	358	12	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	127634396	127633665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127633753_127634053
Isoform_41643_13	chr2	-	454	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-12	358	-12	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	127634420	127633665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127633753_127634053
Isoform_41646_5	chr2	-	810	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-5	-5	-5	5	multi-exon	FALSE	canonical	3	537	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCCTTGGTTATTTA	NA	False	NA	0	True	GATAAA	-19	NA	127634413	127633302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127633753_127634053
Isoform_41647_69	chr2	-	3394	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	28	-4	22	4	multi-exon	TRUE	canonical	0	0	junction_18	145.15221297161	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	-4	True	AATAAA	-19	NA	127673757	127643040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
Isoform_4165_15	chr10	+	1976	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4089	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977875	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80978121_80979795_80981052_80983803
Isoform_41651_36	chr2	-	6335	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	4	2603	4	-2603	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATTGCTTTGGA	NA	False	NA	-5	True	AATAAA	-20	NA	128529307	128454626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_41652_15	chr2	-	6336	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	1	-2603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	67.3526357791667	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATTGCTTTGGA	NA	False	NA	-5	True	AATAAA	-20	NA	128529310	128454626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514076_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
Isoform_41654_32	chr2	-	1564	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	58	2	58	-2	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785939	128768189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
Isoform_41655_8	chr2	-	1620	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	2	2	2	-2	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785995	128768189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
Isoform_41656_14	chr2	-	1551	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_6	71.0922595997623	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785938	128768189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
Isoform_41660_94	chr2	-	3112	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	25	0	25	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139107	129110129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
Isoform_41672_2143	chr2	-	1115	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	37	9	-32	-9	multi-exon	TRUE	canonical	3	3295	junction_4	264.518850409989	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTGATATATTCATTT	NA	False	NA	-20	True	AATAAA	-19	NA	130021286	130013563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
Isoform_41676_16	chr2	-	1225	12	FSM	ENSMUSG00000027406.14	ENSMUST00000239288.2	1233	12	13	-5	13	1	multi-exon	FALSE	canonical	3	48	junction_1	222.733469301557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	130126368	130121231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_41677_378	chr2	-	1506	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	107	3	-6	1	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	130126360	130121231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_41678_8	chr2	-	2028	11	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	6	-1	intron_retention	FALSE	canonical	3	745	junction_5	50.444523984274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATCTGGTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	130126348	130121233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
Isoform_41679_236	chr2	-	2366	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	-3	True	ATTAAA	-19	NA	130239494	130232694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
Isoform_4168_6	chr10	+	1260	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6095	285	multi-exon	FALSE	canonical	2	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAAGTATTCTAGAG	NA	False	NA	NA	False	AATAAA	-12	NA	100186001	100193264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_100186070_100192072
Isoform_41680_69	chr2	-	2387	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-22	1	-22	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239516	130232695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
Isoform_41684_13	chr2	-	2977	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-26	545	6	-3	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAAGCTTTTTTGGTT	8031	False	NA	NA	False	ATTAAA	-11	NA	130266224	130260147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_41685_19	chr2	-	2244	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-32	1284	0	3	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACATTCCTGTGTCGG	8025	False	NA	-5	True	AATAAA	-15	NA	130266230	130260886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_41686_3	chr2	-	3519	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-21	-2	11	2	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTGAAGAGTTTAAAATA	8036	False	NA	NA	False	AATAAA	-24	NA	130266219	130259600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_41687_4	chr2	-	1931	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	11.0250179323284	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGACATTCCTGTGT	8039	False	NA	-8	True	AATAAA	-12	NA	130266216	130260889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130265768
Isoform_41688_4	chr2	-	2335	6	FSM	ENSMUSG00000037773.15	ENSMUST00000153663.8	3032	6	-43	740	1	5	multi-exon	FALSE	canonical	3	20	junction_5	6.96850055607374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACATTCCTGTGTCGGGG	8026	False	NA	-3	True	AATAAA	-17	NA	130266229	130260884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264625_130264732_130264813_130265331
Isoform_41689_3	chr2	-	2031	7	NNC	ENSMUSG00000037773.15	novel	3496	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	11.6045967903528	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGACATTCCTGTGTC	8054	False	NA	-7	True	AATAAA	-13	NA	130266201	130260888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130261254_130261549_130261629_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
Isoform_4169_9	chr10	+	1181	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6095	206	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTTGTGGATAAATAG	NA	False	NA	NA	False	AATACA	-16	NA	100186001	100193185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_100186070_100192072
Isoform_41690_46	chr2	-	2366	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	36	1329	25	-1329	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATTCCTCCTAGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	130471922	130433250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
Isoform_41692_7	chr2	-	2854	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	-2	879	-2	-879	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTGATTGCCTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	130471960	130432800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
Isoform_41693_98	chr2	-	2516	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	22	-1329	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATTCCTCCTAGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	130471925	130433250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_41694_14	chr2	-	2998	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	1	-879	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTGATTGCCTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	130471957	130432800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_41696_5	chr2	-	3858	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	15	6	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATTTCTCATTAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	130471932	130431915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_41697_7	chr2	-	2572	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	26	-1331	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGGATTCCTCCTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	130471921	130433252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_41698_10	chr2	-	2502	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	21	3156	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	32.6398529408452	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	130471926	130438548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
Isoform_41699_24	chr2	-	2978	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	25	12	25	-12	multi-exon	FALSE	canonical	3	43	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471922	130455771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130458663_130471835
Isoform_4170_7	chr10	+	1861	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4014	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977800	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80977931_80979795_80981052_80983803
Isoform_41700_39	chr2	-	3129	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	21	-12	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471926	130455771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130458663_130470408_130470556_130471835
Isoform_41701_6	chr2	-	1182	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	56	0	56	0	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCAGAAGTCCCACT	NA	False	NA	71	True	AATAAA	-18	NA	130506523	130495879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
Isoform_41702_199	chr2	-	1111	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	56	71	56	4	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTGTTTGTAGAAGAC	NA	False	NA	0	True	ATTAAA	-20	NA	130506523	130495950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
Isoform_41704_47	chr2	-	3151	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	45	0	-5	0	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539394	130526032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
Isoform_41706_3	chr2	-	3151	21	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	30.7900552126819	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539906	130526032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539790
Isoform_41707_25	chr2	-	3043	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539394	130526032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
Isoform_41708_19	chr2	-	4978	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	-11	1661	0	1269	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130682065	130549780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
Isoform_41709_21	chr2	-	1313	8	Fusion	ENSMUSG00000027309.19_ENSMUSG00000089662.2	novel	1984	7	NA	NA	0	115	multi-exon	TRUE	canonical	3	31	junction_1	16.7063473211928	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	1	True	AATAAA	-32	NA	130682052	130645305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_-_130645843_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
Isoform_41710_3	chr2	-	1116	4	ISM	ENSMUSG00000027316.16	ENSMUST00000110239.8	810	6	1170	-572	-1	3	intron_retention	FALSE	canonical	3	10	junction_1	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTGGTTTTCTGTCAT	NA	False	NA	-2	True	AATAAA	-17	NA	130883432	130881555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_130882179_130882318_130882396_130882935_130883071_130883151
Isoform_41711_5	chr2	-	1191	4	FSM	ENSMUSG00000027316.16	ENSMUST00000156509.2	1125	4	-62	-4	-8	-3	multi-exon	FALSE	canonical	2	5	junction_1	6.48074069840786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGTTTTCTGTCATT	NA	False	NA	-1	True	AATAAA	-18	NA	130883439	130881554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151
Isoform_41713_12	chr2	-	1262	6	NIC	ENSMUSG00000027327.17	novel	874	7	NA	NA	-3	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	267.333050706418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001957	130988236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993677_130995513_130995631_131001872
Isoform_41714_9	chr2	-	1295	6	FSM	ENSMUSG00000027327.17	ENSMUST00000028800.12	832	6	24	-487	-15	7	multi-exon	FALSE	canonical	3	7	junction_4	282.042124513343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001977	130988236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995504_130995631_131001872
Isoform_41715_680	chr2	-	1273	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-24	-8	-2	7	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGCGGGGGTTTTTT	NA	False	NA	-7	True	AATAAA	-22	NA	131001964	130988236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
Isoform_41717_3	chr2	-	3210	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	10	2758	-9	1824	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTTCTTTGTCAAGT	NA	False	NA	NA	False	CATAAA	-14	NA	131194791	131142741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
Isoform_41718_18	chr2	-	4660	12	NNC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	108	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.4229858935924	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	0	True	AATAAA	-15	NA	131871813	131834771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_131836034_131836061_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
Isoform_4172_7	chr10	+	600	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	60	-4	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	3.96988664825584	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTGACTGATGCAATA	NA	False	NA	2	True	AATAAA	-12	NA	127563775	127567632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
Isoform_41720_12	chr2	-	6375	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	-13	2	-13	-2	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7586	False	NA	-3	True	AATAAA	-15	NA	131987041	131894417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
Isoform_41721_128	chr2	-	1568	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	45	-1	-3	1	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTGTTATTGATT	4915	False	NA	-1	True	TATAAA	-21	NA	132089682	132081410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
Isoform_41725_3	chr2	-	1055	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	21	536	2	-534	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTATCTGTCTTA	4891	False	NA	NA	False	NA	NA	NA	132089706	132081947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
Isoform_41726_13	chr2	-	1537	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	13	1	0	-1	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGTTGTTATTGA	4921	False	NA	-3	True	TATAAA	-19	NA	132089676	132081412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
Isoform_41727_3	chr2	-	1522	4	FSM	ENSMUSG00000027341.11	ENSMUST00000180286.2	1531	4	7	2	7	-2	multi-exon	FALSE	canonical	3	7	junction_3	263.641591728029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGTGTTGTTAT	4896	False	NA	-6	True	TATAAA	-16	NA	132089701	132081415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089552
Isoform_41728_3	chr2	-	1455	3	NIC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	306.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGTTGTTATTGA	4903	False	NA	-3	True	TATAAA	-19	NA	132089694	132081412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_132082547_132087875_132087995_132089492
Isoform_4173_4	chr10	+	682	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-22	-4	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTGACTGATGCAATA	NA	False	NA	2	True	AATAAA	-12	NA	127563693	127567632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
Isoform_41734_140	chr2	-	1285	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	102	131	102	-131	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCATAGAGCAGTGCCG	8327	False	NA	-10	True	AATAAA	-14	NA	132095132	132091212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_41735_1053	chr2	-	1257	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	124	137	-124	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8362	False	NA	-3	True	AATAAA	-21	NA	132095097	132091205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_41738_24	chr2	-	1383	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	134	1	134	-1	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACGTTGTGCAAAGTTTT	8359	False	NA	-11	True	AATAAA	-26	NA	132095100	132091082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
Isoform_41746_15	chr2	-	3609	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	76	1	21	0	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420077	132371002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
Isoform_41747_7	chr2	-	3664	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	21	1	5	0	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420132	132371002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
Isoform_41749_5	chr2	-	3603	20	FSM	ENSMUSG00000027346.16	ENSMUST00000110142.8	3703	20	100	0	-15	0	multi-exon	TRUE	canonical	3	30	junction_19	19.1733598654971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420068	132371002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
Isoform_4175_6	chr10	+	1305	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCCAGAAGTTTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	22237784	22250042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
Isoform_41750_3	chr2	-	2918	11	FSM	ENSMUSG00000037376.15	ENSMUST00000147336.8	2948	11	23	7	-19	-7	multi-exon	FALSE	canonical	3	23	junction_6	111.30929880293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAAGTCATTAATGATA	NA	False	NA	-19	True	AATAAA	-16	NA	132657952	132646133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
Isoform_41752_101	chr2	-	2784	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	43	1	2	-1	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATTAATGATACAATGC	NA	False	NA	-13	True	AATAAA	-22	NA	132657931	132646127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
Isoform_41753_28	chr2	-	2805	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	17	6	17	-6	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAGTCATTAATGATAC	NA	False	NA	-18	True	AATAAA	-17	NA	132657957	132646132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
Isoform_41757_7	chr2	-	3483	4	ISM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	901	209	901	-209	3prime_fragment	FALSE	canonical	3	9	junction_1	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	132721910	132710433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154
Isoform_41759_6	chr2	-	3530	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-25	210	-25	-210	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	132722836	132710434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
Isoform_4176_5	chr10	+	1220	8	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-8841	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.1452920898866	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGTGTTTATCTCAG	NA	False	NA	2	True	AATAAA	-15	NA	39508288	39530818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_39508350_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_41760_3	chr2	-	2283	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	11	3194	-2	1624	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAAATCTCTATC	2703	False	NA	NA	False	NA	NA	NA	134486054	134439298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
Isoform_41761_45	chr2	-	2954	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	222	2	-13	-2	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTATACAATCCTTAC	NA	False	NA	-2	True	AATAAA	-18	NA	136733087	136715701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
Isoform_41766_3	chr2	-	5405	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	197	10	197	-10	multi-exon	FALSE	canonical	3	87	junction_14	16.9906327133512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACATGGAACAGTGTG	NA	False	NA	-11	True	AATAAA	-34	NA	136958367	136923385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
Isoform_41767_7	chr2	-	5333	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	269	10	269	-10	multi-exon	TRUE	canonical	3	87	junction_14	16.9906327133512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACATGGAACAGTGTG	NA	False	NA	-11	True	AATAAA	-34	NA	136958295	136923385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
Isoform_41769_4	chr2	-	2482	14	FSM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-3	1	-3	-1	multi-exon	FALSE	canonical	3	23	junction_13	23.0823070642491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTGTGTGACTGCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	139908683	139675400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
Isoform_4177_3	chr10	+	1288	9	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-8837	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	30.1307048540189	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39508292	39530820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_39508350_39509687_39509758_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
Isoform_41770_17	chr2	-	2273	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	-15	0	-15	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908740	139675399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_41771_4	chr2	-	2227	14	NNC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	25.4783816007627	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGACTGCTTGTCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	139908702	139675394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789089_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_41772_4	chr2	-	1855	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	5	143042	5	10	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGCCCATTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	139908700	139818441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
Isoform_41773_6	chr2	-	2010	10	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	19088	13	9839	5prime_fragment	FALSE	canonical	3	379	junction_4	14.7857121556798	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAGAGAAGAAAAGA	6990	False	NA	NA	False	GATAAA	-29	NA	140012471	139980890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
Isoform_41781_39	chr2	-	2851	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	1126	0	1	multi-exon	FALSE	canonical	3	47	junction_1	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATACA	-6	NA	140513389	140501243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_140503672_140505180_140505380_140513165
Isoform_41782_9	chr2	-	5110	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	82	1191	-5	46	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTGTAGTTCAGTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	142743369	142460584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_41783_4	chr2	-	5451	26	NNC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-22	371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	18.5924715947074	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTGTATGCTTCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	142743386	142460259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581443_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
Isoform_41789_12	chr2	-	3088	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	85.5170105353847	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9728	False	NA	-1	True	ATTAAA	-20	NA	143853213	143789314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143852918
Isoform_4179_7	chr10	+	1986	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4068	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80977854	80984278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_80978110_80979795_80981052_80983803
Isoform_41793_11	chr2	-	1486	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	77	3116	77	-3116	5prime_fragment	FALSE	canonical	3	227	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAGGACAAAAAAATAG	9835	False	NA	NA	False	NA	NA	NA	143853106	143830888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_143832187_143852918
Isoform_41796_3	chr2	-	1604	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	-30	3105	-30	-3105	5prime_fragment	FALSE	canonical	3	227	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGAAGGAGCCCAG	9728	False	NA	NA	False	AAAACA	-6	NA	143853213	143830877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_143832187_143852918
Isoform_41802_27	chr2	-	2233	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	-221	407	-9	-407	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112713	144092449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
Isoform_4181_6	chr10	+	2959	7	Fusion	ENSMUSG00000025354.6_ENSMUSG00000078427.4	novel	427	7	NA	NA	-569	651	multi-exon	FALSE	canonical	3	6	junction_1	135.15299972007	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTCTCTTCTTTAC	3447	False	NA	NA	False	TATAAA	-20	NA	128640853	128654023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr10_+_128640915_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
Isoform_41814_119	chr2	-	2041	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	64	407	-58	-407	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112762	144092449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_41815_508	chr2	-	1992	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	407	-9	-407	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112713	144092449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_41816_179	chr2	-	2397	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	2	-9	-2	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112713	144092044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_41817_82	chr2	-	2110	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	-7	409	-7	-409	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGAGTGCTTTTGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	144112833	144092451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_41818_54	chr2	-	2453	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	57	2	57	-2	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112769	144092044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_41820_34	chr2	-	2487	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	23	2	23	-2	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTTTCTGACTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	144112803	144092044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
Isoform_4183_5	chr10	+	933	6	NNC	ENSMUSG00000000295.14	novel	631	3	NA	NA	35	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.023485765176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAACACTCCAGACT	NA	False	NA	4	True	ATTAAA	-11	NA	31189502	31204184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_31189695_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
Isoform_41832_13	chr2	-	1537	4	FSM	ENSMUSG00000037279.14	ENSMUST00000037423.4	1539	4	1	1	1	-1	multi-exon	FALSE	canonical	3	14	junction_1	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCTTTTTTAAAATTT	NA	False	NA	-13	True	AATAAA	-18	NA	144174065	144147095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144147840_144159630_144159821_144172823_144173042_144173680
Isoform_41833_175	chr2	-	2114	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	55	1	-24	-1	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGACTGCTGTGGTG	NA	False	NA	-10	True	AATAAA	-19	NA	144392734	144384185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
Isoform_41836_141	chr2	-	2350	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	297	781	-3	-781	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTACTTGAGTCCG	NA	False	NA	-15	True	AGTAAA	-15	NA	145776637	145760179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
Isoform_41839_4	chr2	-	1451	2	FSM	ENSMUSG00000054160.3	ENSMUST00000067020.3	1725	2	264	10	264	-10	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACTAAGTATACGGAT	NA	False	NA	NA	False	AATAAA	-8	NA	146927101	146925245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_146926410_146926814
Isoform_4184_3	chr10	+	2491	14	NNC	ENSMUSG00000040054.18	novel	2455	13	NA	NA	624	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	120.928214805705	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAAAGGTAAA	NA	False	NA	30	True	NA	NA	NA	127929275	127955195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_127929388_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138
Isoform_41840_3	chr2	-	3522	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	1	788	1	-788	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGACTGAAA	NA	False	NA	NA	False	NA	NA	NA	148574332	148536692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
Isoform_41843_701	chr2	-	780	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	80	0	-45	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	-6	True	ATTAAA	-20	NA	148717416	148713641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_148713964_148714736_148714851_148717072
Isoform_41850_3	chr2	-	2366	4	FSM	ENSMUSG00000068134.14	ENSMUST00000122859.8	4181	4	1	1814	1	936	multi-exon	FALSE	canonical	2	3	junction_1	24.3903441732356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149978597	149958139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_149960121_149961400_149961549_149961744_149961872_149978487
Isoform_41851_7	chr2	-	2283	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	31	1813	1	937	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149978597	149958138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
Isoform_41852_3	chr2	-	711	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	14	2009	14	-2009	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGACATGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	150326997	150314919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
Isoform_41853_68	chr2	-	2212	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	23	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1022	False	NA	NA	False	AATAAA	-15	NA	150450464	150424999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
Isoform_41854_15	chr2	-	2909	10	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	30121	0	-22	0	3prime_fragment	FALSE	canonical	3	171	junction_6	13.5655700712511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	5032	False	NA	-5	True	AATAAA	-27	NA	150480057	150460024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766
Isoform_41856_12	chr2	-	2834	11	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	53.8924855615326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGGATGTTTTTGGTTG	5032	False	NA	-7	True	AATAAA	-25	NA	150480057	150460026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150479992
Isoform_41857_4	chr2	-	3399	13	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	8166	5	8122	-5	3prime_fragment	FALSE	canonical	3	168	junction_11	14.0185888495716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATGGGGATGTTTTTGG	NA	False	NA	-10	True	AATAAA	-22	NA	150502012	150460029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755
Isoform_41859_123	chr2	-	3568	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	44	6	0	-6	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510134	150460030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
Isoform_41860_27	chr2	-	3353	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7987	-6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	46.5577201092917	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150502147	150460030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
Isoform_41861_5	chr2	-	4785	2	NIC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-32	2815	intron_retention	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150548828	150543640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_150548201_150548603
Isoform_41862_32	chr2	-	1949	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	28	22	18	2	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTTTTCTCTACA	NA	False	NA	-27	True	AATAAA	-16	NA	150746633	150674434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
Isoform_41864_3	chr2	-	1074	9	ISM	ENSMUSG00000032046.16	ENSMUST00000138608.8	1334	10	-41	905	28	-905	5prime_fragment	FALSE	canonical	3	259	junction_1	23.9553621346036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGAGCAAGTAGATAA	NA	False	NA	NA	False	AATAAA	-33	NA	150746623	150680183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
Isoform_41865_7	chr2	-	5045	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	47	1	-19	-1	multi-exon	FALSE	canonical	3	41	junction_10	8.5081968705865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTTAAAGTTTTAAAT	7610	False	NA	1	True	ATTAAA	-17	NA	150851271	150776439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_41869_16	chr2	-	2314	13	ISM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	13	23563	-9	477	5prime_fragment	FALSE	canonical	3	46	junction_10	8.16836716989523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTATTAGTCAGCTCT	7576	False	NA	NA	False	ATTAAA	-13	NA	150851305	150800001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_41870_3	chr2	-	2640	13	ISM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	-1	23251	-1	789	5prime_fragment	FALSE	canonical	3	46	junction_10	8.16836716989523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAACTCCTGCCCTTG	7562	False	NA	NA	False	NA	NA	NA	150851319	150799689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
Isoform_41872_49	chr2	-	1347	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	36	11	0	-11	multi-exon	FALSE	canonical	3	184	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCATCCTTTTAG	NA	False	NA	-12	True	ATTAAA	-27	NA	150881282	150871615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150872837_150881156
Isoform_41873_23	chr2	-	1371	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	12	11	12	-11	multi-exon	FALSE	canonical	3	184	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCATCCTTTTAG	NA	False	NA	-12	True	ATTAAA	-27	NA	150881306	150871615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_150872837_150881156
Isoform_41874_4	chr2	-	3322	5	FSM	ENSMUSG00000027457.16	ENSMUST00000109877.10	3367	5	49	-4	-4	4	multi-exon	TRUE	canonical	1	1	junction_2	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACATAAAATCCATATAT	1688	False	NA	NA	False	AATAAA	-18	NA	151474464	151433640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_151436520_151439028_151439179_151442897_151442995_151474067_151474175_151474375
Isoform_41876_42	chr2	-	2844	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	35	930	18	-680	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAATAGCTTTATTA	NA	False	NA	-1	True	AATAAA	-19	NA	151583195	151558661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_41877_210	chr2	-	1315	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	45	2449	28	4	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	-24	True	AATACA	-19	NA	151583185	151560180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
Isoform_41879_77	chr2	-	1736	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	17	1	17	-1	multi-exon	FALSE	canonical	3	86	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGGACTCTTCTCTG	NA	False	NA	-2	True	AATAAA	-21	NA	151822122	151811318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_151812845_151821912
Isoform_41885_295	chr2	-	2386	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	-3	1	-3	-1	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAAGGTGTCATGCTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	152174335	152158254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_4189_3	chr10	+	2014	11	NNC	ENSMUSG00000044475.15	novel	1473	11	NA	NA	-88	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	72.0639299511205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGTGCTGTGGTCTG	NA	False	NA	22	True	AATAAA	-12	NA	59839060	59935804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_59839698_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
Isoform_41893_68	chr2	-	2250	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	1	1	1	-1	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAAGGTGTCATGCTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	152174572	152158254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
Isoform_419_1680	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1680	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV5_+_11100_13600
Isoform_41903_74	chr2	-	2189	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174301	152158256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_41909_10	chr2	-	2104	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	188.779118430921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174328	152158256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
Isoform_4191_3	chr10	+	514	2	Antisense	novelGene_ENSMUSG00000004356.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	88662229	88666783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_+_88662471_88666510
Isoform_41915_1680	chr2	-	2052	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-28	2	-28	-2	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTTGGTGACTTTCT	NA	False	NA	-6	True	AATAAA	-27	NA	152185980	152179343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
Isoform_41920_20	chr2	-	1964	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5973	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	427.130737206615	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTTGGTGACTTTCT	NA	False	NA	-6	True	AATAAA	-27	NA	152191925	152179343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191809
Isoform_41926_53	chr2	-	2592	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-21	-3	-21	-1	multi-exon	FALSE	canonical	3	144	junction_2	91.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152672607	152622588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152624203_152671346_152672023_152672305
Isoform_41927_153	chr2	-	2569	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	6	-7	6	3	multi-exon	FALSE	canonical	3	144	junction_2	91.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTGGCTCTGCGCCGC	NA	False	NA	-2	True	AATAAA	-25	NA	152672580	152622584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152624203_152671346_152672023_152672305
Isoform_4193_12	chr14	+	176	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6119	False	NA	NA	False	NA	NA	NA	55069058	55069234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_55069100_55069200
Isoform_41930_15	chr2	-	3200	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-624	-8	-178	4	multi-exon	FALSE	canonical	3	144	junction_2	91.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152673210	152622583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152624203_152671346_152672023_152672305
Isoform_41933_13	chr2	-	2414	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	154.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152672584	152622588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_152624203_152671346_152672023_152672460
Isoform_41934_232	chr2	-	2391	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	25	1	7	-1	multi-exon	FALSE	canonical	3	148	junction_2	89.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152673623	152622588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152624203_152671346_152672023_152673522
Isoform_41936_14	chr2	-	2609	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	150.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	False	NA	-7	True	AATAAA	-20	NA	152672607	152622589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_152624203_152671346_152672041_152672305
Isoform_41937_21	chr2	-	2409	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	148	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCCTTGGCTCTGCG	NA	False	NA	-6	True	AATAAA	-21	NA	152673623	152622588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_152624203_152671346_152672041_152673522
Isoform_41939_75	chr2	-	1228	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	38	7	-12	-7	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAGCTCTGAGTTGTC	8677	False	NA	NA	False	AATAAA	-14	NA	152857309	152850816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
Isoform_41941_4	chr2	-	4456	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	-1	1155	-1	-1155	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAATCCGTCCGTGGTC	NA	False	NA	-6	True	AGTAAA	-20	NA	153286400	153250540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
Isoform_41942_4	chr2	-	1333	10	FSM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	9	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_9	72.7254264636584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAAGCTCTGAATCC	NA	False	NA	-20	True	ATTAAA	-16	NA	153474651	153460754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
Isoform_41943_40	chr2	-	1266	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	44	1900	3	1	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGCTCTGAATCCAC	NA	False	NA	-18	True	ATTAAA	-18	NA	153474657	153460752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
Isoform_41946_6	chr2	-	1162	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	17	2031	17	-130	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTTTGTCTCTTTG	NA	False	NA	-4	True	NA	NA	NA	153474684	153460883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
Isoform_41947_7	chr2	-	2039	14	NIC	ENSMUSG00000027487.12	novel	1970	14	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	25.3818180276853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGCTTCCTTGTCT	5706	False	NA	-19	True	AATAAA	-8	NA	154214613	154177309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214501
Isoform_41948_83	chr2	-	1974	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-8	4	4	-4	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGCTTCCTTGTCT	5672	False	NA	-19	True	AATAAA	-8	NA	154214647	154177309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
Isoform_41949_3	chr2	-	2272	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-305	3	-14	-3	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGGCTTCCTTGTCTA	5375	False	NA	-18	True	AATAAA	-9	NA	154214944	154177308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
Isoform_4195_3	chr10	-	678	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	77814311	77813633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_77813600_77814300
Isoform_41950_4	chr2	-	2215	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	-65	10	-65	-4	multi-exon	FALSE	canonical	2	7	junction_14	23.0212856251934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGCTTCCTTGTCT	5324	False	NA	-19	True	AATAAA	-8	NA	154214995	154177309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
Isoform_41952_411	chr2	-	2132	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	-9	8	-9	-8	multi-exon	FALSE	canonical	3	100	junction_7	15.9808558939138	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATCATGTCTGTGG	NA	False	NA	-7	True	AATAAA	-22	NA	154250028	154218240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
Isoform_41954_6	chr2	-	1832	8	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-13215	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	44.4453344582088	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGTCTGTGGTTTGTG	NA	False	NA	-1	True	AATAAA	-28	NA	154263234	154218234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154263111
Isoform_41955_10	chr2	-	1999	9	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-13215	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.6328665558722	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATCATGTCTGTGG	NA	False	NA	-7	True	AATAAA	-22	NA	154263234	154218240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154254470_154254644_154263111
Isoform_41956_7	chr2	-	2430	8	NNC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	38	-429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.3588927861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGAGCGTTTATTTATT	9540	False	NA	-3	True	NA	NA	NA	154411774	154401982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
Isoform_41957_7	chr2	-	2887	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-134	2	38	-2	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTGGGTTTGAAACT	9540	False	NA	-23	True	AATAAA	-14	NA	154411774	154401555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
Isoform_41959_20	chr2	-	2695	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	39	-2	39	2	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTTGTGTCGAATGC	9541	False	NA	-1	True	AGTAAA	-16	NA	154411773	154401324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_4196_60	chr10	-	2138	1	FSM	ENSMUSG00000020277.11	ENSMUST00000220304.2	2141	1	-10	13	-10	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAC	NA	False	NA	NA	False	AAAAAG	-14	NA	77845580	77843442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_77843400_77845600
Isoform_41960_119	chr2	-	2005	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	453.49652924892	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATGGAGCGTTTATTT	9540	False	NA	-6	True	NA	NA	NA	154411774	154401985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_41961_79	chr2	-	2444	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	453.49652924892	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9540	False	NA	-20	True	AATAAA	-17	NA	154411774	154401552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154402318_154402341_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_41964_5	chr2	-	2310	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-429	intron_retention	TRUE	non_canonical	0	0	junction_1	473.966741683657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGAGCGTTTATTTATT	9541	False	NA	-3	True	NA	NA	NA	154411773	154401982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154402321_154402350_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
Isoform_41965_4	chr2	-	2741	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	1	intron_retention	TRUE	non_canonical	0	0	junction_1	473.966741683657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9541	False	NA	-20	True	AATAAA	-17	NA	154411773	154401552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_154402338_154402366_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
Isoform_41966_16	chr2	-	1189	4	ISM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	38	3172	38	-2945	5prime_fragment	FALSE	canonical	3	965	junction_3	42.6953028902348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9540	False	NA	NA	False	NA	NA	NA	154411774	154404498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_154405011_154405814_154406035_154406337_154406429_154411408
Isoform_41968_7	chr2	-	1491	3	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-2945	intron_retention	FALSE	canonical	3	965	junction_2	51	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9541	False	NA	NA	False	NA	NA	NA	154411773	154404498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_154405011_154405814_154406429_154411408
Isoform_41970_7	chr2	-	1847	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-1	943	-1	-943	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATTAAAGAACATGTAA	NA	False	NA	-28	True	NA	NA	NA	154445629	154428620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
Isoform_41971_89	chr2	-	961	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-1	1829	-1	-1829	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTCTGTGGCTTGA	NA	False	NA	-2	True	NA	NA	NA	154445629	154429506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
Isoform_41981_185	chr2	-	2431	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	104	7	0	1	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGCTCCATTGCTTTT	3736	False	NA	-15	True	AATAAA	-25	NA	154734751	154713336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_41983_51	chr2	-	2474	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	61	7	-43	1	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGCTCCATTGCTTTT	3693	False	NA	-15	True	AATAAA	-25	NA	154734794	154713336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_41984_1274	chr2	-	1389	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	127	1026	0	-1018	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGAAGTCGATCTGT	3759	False	NA	-24	True	ATTAAA	-16	NA	154734728	154714355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_41985_395	chr2	-	1434	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	82	1026	-22	-1018	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGAAGTCGATCTGT	3714	False	NA	-24	True	ATTAAA	-16	NA	154734773	154714355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
Isoform_4200_7	chr9	+	193	1	Intergenic	novelGene_2064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	65781842	65782035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_65781800_65782000
Isoform_42007_348	chr2	-	2121	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	381	-9	-381	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGCATGTATGTGGCT	NA	False	NA	-21	True	ATTAAA	-20	NA	154916376	154901610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_42008_94	chr2	-	2499	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	3	-9	-3	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGTCTAAGTACCCT	NA	False	NA	-11	True	AATAAA	-27	NA	154916376	154901232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_42010_11	chr2	-	2158	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-421	intron_retention	FALSE	canonical	0	0	junction_5	377.087854484867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTGGCTCTATTAA	NA	False	NA	-61	True	GATAAA	-20	NA	154916376	154901650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
Isoform_42012_9	chr2	-	1634	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	-1	3	-1	-2	multi-exon	FALSE	canonical	3	155	junction_4	21.4987987363815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTGTTCTGATGACA	NA	False	NA	-3	True	AATAAA	-20	NA	155199351	155120165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
Isoform_42013_48	chr2	-	1603	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	28	5	17	-4	multi-exon	FALSE	canonical	3	155	junction_4	21.4987987363815	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTTGTTCTGATGA	NA	False	NA	-5	True	AATAAA	-18	NA	155199322	155120167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
Isoform_42014_14	chr2	-	4051	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACTTAAAGGTATGTTA	NA	False	NA	-24	True	AATAAA	-12	NA	155315726	155232589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
Isoform_42018_12	chr2	-	2434	14	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8240	7	346	-7	3prime_fragment	FALSE	canonical	2	7	junction_10	4.74933816628712	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGACTCTGGCTTGATT	8947	False	NA	NA	False	ATTAAA	-17	NA	155348528	155332305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
Isoform_42020_6	chr2	-	2584	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	21	9	21	-9	multi-exon	FALSE	canonical	1	3	junction_14	5.44593089061054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTGACTCTGGCTTGA	728	False	NA	NA	False	ATTAAA	-15	NA	155356747	155332307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
Isoform_42028_2312	chr2	-	1866	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	96	1	0	-1	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCATTGTTTCATGTA	8446	False	NA	-3	True	AATAAA	-18	NA	155434634	155405101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_42029_188	chr2	-	1917	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	45	1	-38	-1	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCATTGTTTCATGTA	8395	False	NA	-3	True	AATAAA	-18	NA	155434685	155405101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_4203_6	chr10	-	1247	1	FSM	ENSMUSG00000060301.7	ENSMUST00000219729.2	1510	1	11	252	11	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	78933402	78932155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_78932200_78933400
Isoform_42032_34	chr2	-	1791	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	290.295347687297	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCATTGTTTCATGTA	8431	False	NA	-3	True	AATAAA	-18	NA	155434649	155405101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
Isoform_42036_33	chr2	-	3114	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	0	-23	0	-14	multi-exon	TRUE	canonical	3	16	junction_11	88.2006865682525	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534252	155476204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_42037_11	chr2	-	3140	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	-26	-23	24	-14	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534278	155476204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_4204_3	chr10	+	2219	1	FSM	ENSMUSG00000111977.2	ENSMUST00000219233.2	1665	1	-557	3	-557	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCGCTGTTGACGGAGGA	NA	False	NA	NA	False	AATAAA	-17	NA	79473132	79475351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_79473100_79475400
Isoform_42041_618	chr2	-	3138	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	52	14	0	-14	multi-exon	FALSE	canonical	3	309	junction_12	37.6501520663235	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534252	155476204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_42042_235	chr2	-	3161	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	29	14	-23	-14	multi-exon	FALSE	canonical	3	309	junction_12	37.6501520663235	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGATGTGGACCTGAC	NA	False	NA	-7	True	AATAAA	-37	NA	155534275	155476204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
Isoform_42047_15	chr2	-	2112	10	ISM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	60	347	60	-347	intron_retention	FALSE	canonical	3	287	junction_6	14.4435897183012	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	155571335	155543943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810
Isoform_42048_264	chr2	-	1883	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	65	342	65	-342	multi-exon	TRUE	canonical	3	287	junction_6	17.8672885463911	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGCTGGATTCTTGATA	NA	False	NA	-3	True	AATAAA	-23	NA	155571330	155543938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
Isoform_42051_4	chr2	-	1669	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	65	-344	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	100.051961808494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGCTGGATTCTTGA	NA	False	NA	-5	True	AATAAA	-21	NA	155571330	155543940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
Isoform_42052_8	chr2	-	1417	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	188	10	188	-10	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATAAAACGCTGTACAA	7287	False	NA	NA	False	NA	NA	NA	155661158	155659659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155661004_155661085
Isoform_42053_8	chr2	-	1406	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	212	-3	212	3	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAAACCTATGAATCAC	7311	False	NA	NA	False	NA	NA	NA	155661134	155659646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155661004_155661085
Isoform_42054_570	chr2	-	1245	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	250	5	-12	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668595	155661756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
Isoform_42055_10	chr2	-	1323	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	172	5	13	0	multi-exon	FALSE	canonical	3	1052	junction_5	244.745255316625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668673	155661756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
Isoform_4206_4	chr10	+	2429	1	NIC	ENSMUSG00000020327.5	novel	1070	3	NA	NA	16	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79590925	79593354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_79590900_79593400
Isoform_42061_388	chr2	-	2395	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	264	-26	0	-1	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCCTGGAATGGATGG	NA	False	NA	-32	True	AATAAA	-19	NA	155771966	155688814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
Isoform_4207_5	chr10	+	2162	1	NIC	ENSMUSG00000035863.15	novel	2651	9	NA	NA	2	-11936	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629407	79631569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_79629400_79631600
Isoform_42070_24	chr2	-	2412	10	FSM	ENSMUSG00000005882.19	ENSMUST00000136933.8	2413	10	0	1	0	-1	multi-exon	FALSE	canonical	3	22	junction_7	134.914879429061	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCCTGGAATGGATGG	NA	False	NA	-32	True	AATAAA	-19	NA	155771980	155688814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
Isoform_42071_10	chr2	-	2289	9	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_3	140.423856146312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771970	155688815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
Isoform_42072_34	chr2	-	3479	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	16	-3	8	1	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	155953847	155913763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
Isoform_42073_18	chr2	-	3504	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	70.9506595723394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953841	155913764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
Isoform_42074_190	chr2	-	3426	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	17	-2	-13	-1	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCGCTCTTGTTGTG	NA	False	NA	-1	True	AATAAA	-20	NA	155953842	155913762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
Isoform_42075_4	chr2	-	3340	16	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	83.2064634241569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953880	155913766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953825
Isoform_42076_19	chr2	-	3714	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	-3	2924	2	2603	multi-exon	FALSE	canonical	3	132	junction_2	80.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953879	155936801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155940293_155945268_155945318_155953705
Isoform_42077_4	chr2	-	2133	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	6	4528	6	999	multi-exon	FALSE	canonical	3	245	junction_2	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATGAGAGAGATTGAGA	NA	False	NA	NA	False	AAAAAG	-42	NA	155953870	155938405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_42078_69	chr2	-	3709	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	34	2924	-6	2603	multi-exon	FALSE	canonical	3	245	junction_2	24	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953842	155936801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_42079_7	chr2	-	3972	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	30	2665	-10	-2665	multi-exon	FALSE	canonical	3	245	junction_2	24	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTTGACCGCCAAG	NA	False	NA	-1	True	AATAAA	-23	NA	155953846	155936542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155940293_155945268_155945350_155953705
Isoform_4208_5	chr10	-	417	1	FSM	ENSMUSG00000091994.3	ENSMUST00000217802.2	3420	1	829	2174	814	-2174	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	79689976	79689559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79689600_79690000
Isoform_42081_352	chr2	-	2028	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	13	10	7	1	multi-exon	FALSE	canonical	3	228	junction_1	23.0952135493242	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3119	False	NA	-12	True	AATAAA	-7	NA	155986093	155965568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_42083_8	chr2	-	1559	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5500	1	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_8	81.7823903722556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3226	False	NA	-12	True	AATAAA	-7	NA	155976229	155965568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
Isoform_42085_6	chr2	-	2944	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	-13	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.714115751637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCCTGATCCTTGA	3126	False	NA	-12	True	AATAAA	-7	NA	155986086	155965568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_155966636_155966665_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_42087_5	chr2	-	1769	4	FSM	ENSMUSG00000027618.18	ENSMUST00000125449.2	1649	4	9	-129	9	129	multi-exon	FALSE	canonical	3	266	junction_1	23.1564725772779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGGAAAAAAAAAAAAGAG	3148	False	NA	NA	False	NA	NA	NA	155986064	155980297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_42088_9	chr2	-	675	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	27	7	0	-7	multi-exon	FALSE	canonical	3	275	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCATTTCGCGGGTCA	3139	False	NA	-7	True	NA	NA	NA	155986073	155983713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155984163_155985286_155985379_155985939
Isoform_4209_3	chr10	-	585	1	FSM	ENSMUSG00000091994.3	ENSMUST00000217802.2	3420	1	660	2175	645	-2175	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	79690145	79689560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_79689600_79690100
Isoform_42092_11	chr2	-	2801	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	156022102	155989166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_42095_36	chr2	-	2730	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-15	-4	2	1	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022102	155989164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_42101_17	chr2	-	2814	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	1	-695	1	1	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022095	155989164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_42103_51	chr2	-	2748	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	56	6	2	1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022102	155989164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_42105_17	chr2	-	2768	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	34	8	-8	-1	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAATTTTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	156022124	155989166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
Isoform_42116_59	chr2	-	481	4	FSM	ENSMUSG00000027620.17	ENSMUST00000132929.8	672	4	12	179	0	21	multi-exon	FALSE	canonical	3	383	junction_1	893.526844712694	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAGTTTGACTAAGG	NA	False	NA	-5	True	NA	NA	NA	156022104	156019259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156019306_156020799_156020873_156021096_156021161_156021806
Isoform_42117_201	chr2	-	406	3	ISM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	56	2566	2	21	5prime_fragment	FALSE	canonical	3	1623	junction_1	363	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAGTTTGACTAAGG	NA	False	NA	-5	True	NA	NA	NA	156022102	156019259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_156019306_156021096_156021161_156021806
Isoform_42118_29	chr2	-	452	3	ISM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	10	2566	10	21	5prime_fragment	FALSE	canonical	3	1623	junction_1	363	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAGTTTGACTAAGG	NA	False	NA	-5	True	NA	NA	NA	156022148	156019259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_156019306_156021096_156021161_156021806
Isoform_42119_14	chr2	-	752	4	ISM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	-35	229	0	-229	5prime_fragment	FALSE	canonical	3	90	junction_1	977.365279150477	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTCTTGATGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	156022104	156019509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_156019827_156020799_156020873_156021096_156021161_156021806
Isoform_42120_89	chr2	-	771	3	FSM	ENSMUSG00000027620.17	ENSMUST00000137340.2	715	3	-37	-19	2	17	multi-exon	FALSE	canonical	3	533	junction_1	908	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAGAAAAAGAACAGAAG	NA	False	NA	-15	True	AATAGA	-25	NA	156022102	156020461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156020873_156021096_156021161_156021806
Isoform_42123_67	chr2	-	995	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	30	-17	2	17	multi-exon	FALSE	canonical	3	2349	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAGAAAAAGAACAGAAG	NA	False	NA	-15	True	AATAGA	-25	NA	156022102	156020461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156021161_156021806
Isoform_42128_257	chr2	-	602	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	201	0	201	0	multi-exon	FALSE	canonical	3	384	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154466	156153765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156154323_156154421
Isoform_42129_8	chr2	-	822	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	384	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154686	156153765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156154323_156154421
Isoform_42130_8	chr2	-	3289	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	-73	-2342	-1	2342	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681813	156672626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
Isoform_42131_17	chr2	-	3211	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	5	-2342	5	2342	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681735	156672626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
Isoform_42132_22	chr2	-	3021	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-9	2339	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681729	156672629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
Isoform_42134_13	chr2	-	3102	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	5	2342	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681807	156672626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
Isoform_42135_3	chr2	-	2149	3	ISM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	20	3101	0	1672	5prime_fragment	FALSE	canonical	3	47	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	156681720	156678069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_156679834_156680337_156680457_156681454
Isoform_42136_6	chr2	-	2641	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	-29	0	-16	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5898	False	NA	0	True	AATAAA	-22	NA	156833992	156769264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_42138_5	chr2	-	2698	16	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_15	44.4400220021948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCGGCTGCTGGTGTTA	6036	False	NA	-3	True	AATAAA	-19	NA	156833854	156769267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833681
Isoform_42139_173	chr2	-	2577	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	9	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5923	False	NA	0	True	AATAAA	-22	NA	156833967	156769264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_4214_3	chr10	-	179	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4805	False	NA	NA	False	NA	NA	NA	79706898	79706719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_79706700_79706900
Isoform_42140_8	chr2	-	1329	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-22	1279	-22	-221	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCCCCACTTCCTTT	5892	False	NA	NA	False	AATAGA	-16	NA	156833998	156770543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_42141_3	chr2	-	1567	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-41	1060	-41	-2	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATGTGTGTGCGAGC	5873	False	NA	-17	True	NA	NA	NA	156834017	156770324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_42142_8	chr2	-	2605	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	42.7715812574811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5859	False	NA	0	True	AATAAA	-22	NA	156834031	156769264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
Isoform_42143_3	chr2	-	2551	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.603188119024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCGGCTGCTGGTGTTAT	5895	False	NA	-2	True	AATAAA	-20	NA	156833995	156769266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156770802_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
Isoform_42144_4	chr2	-	2947	10	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	223	11	178	1	3prime_fragment	FALSE	canonical	3	171	junction_9	21.9027029168029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAAGTGTACACTATG	8357	False	NA	-17	True	AATAAA	-19	NA	156848772	156837195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
Isoform_42145_76	chr2	-	2064	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	4	12	4	0	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8138	False	NA	-18	True	AATAAA	-18	NA	156848991	156837196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
Isoform_42146_19	chr2	-	4082	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	4	-2006	4	914	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	8138	False	NA	NA	False	AATAAA	-16	NA	156848991	156835178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
Isoform_42149_5	chr2	-	2105	11	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	162	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	61.4528274369862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8341	False	NA	-18	True	AATAAA	-18	NA	156848788	156837196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
Isoform_42150_7	chr2	-	2559	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	91	-14	12	2	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGACAGTGTGTCT	8146	False	NA	-4	True	AATAAA	-32	NA	156848983	156837182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
Isoform_42153_21	chr2	-	2123	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-86	-1	0	1	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977126	156941319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42154_21	chr2	-	2043	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-6	-1	-6	1	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977046	156941319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42155_58	chr2	-	2000	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	59	1867	0	1	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTGCGGTTAGT	NA	False	NA	-4	True	AGTAAA	-19	NA	156977126	156941319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42156_3	chr2	-	3755	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	167	4	-5	-4	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTAGTCTCTCGAGTT	NA	False	NA	-9	True	ATTAAA	-14	NA	156977018	156939456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42158_16	chr2	-	2041	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	16	1869	16	-1	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAATATCTGCGGTTA	NA	False	NA	-6	True	AGTAAA	-17	NA	156977169	156941321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42159_3	chr2	-	3810	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	111	5	-34	-5	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTAGTCTCTCGAGT	NA	False	NA	-10	True	ATTAAA	-13	NA	156977074	156939457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
Isoform_42160_21	chr2	-	4865	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-12	9	2	-9	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAACTATTGTACTT	NA	False	NA	NA	False	NA	NA	NA	157046444	156987821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_42162_11	chr2	-	2316	15	ISM	ENSMUSG00000027641.14	ENSMUST00000154721.8	2715	16	8	2811	0	-2811	5prime_fragment	FALSE	canonical	3	55	junction_2	35.4011991034087	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTCTGTATTTTTTAA	NA	False	NA	NA	False	CATAAA	-37	NA	157046446	157011708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_42163_18	chr2	-	2394	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	-8	-3	0	3	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTGTATACATGTTTT	NA	False	NA	-3	True	NA	NA	NA	157046454	157016902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
Isoform_42165_3	chr2	-	2081	2	FSM	ENSMUSG00000067787.11	ENSMUST00000088494.3	2108	2	27	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	157408254	157398281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157400248_157408139
Isoform_42166_234	chr2	-	2053	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	3	0	3	0	multi-exon	FALSE	canonical	3	207	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	157408254	157398281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157400248_157408167
Isoform_42167_23	chr2	-	633	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-4	0	4	multi-exon	FALSE	canonical	3	113	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAATATGTATG	8707	False	NA	-9	True	NA	NA	NA	157439240	157437498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157437906_157439014
Isoform_42168_4	chr2	-	712	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-83	0	83	multi-exon	FALSE	canonical	3	113	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTGGTGGGAAGAAAGA	8707	False	NA	-1	True	AATAAA	-20	NA	157439240	157437419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157437906_157439014
Isoform_4217_4	chr10	+	2020	1	NIC	ENSMUSG00000004665.11	novel	2460	7	NA	NA	16	-4065	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAGATTAAAAAAAAA	1785	False	NA	NA	False	NA	NA	NA	79824433	79826453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_79824400_79826500
Isoform_42170_193	chr2	-	3799	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	21	10	21	-1	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATGTCTTGATGAGAG	NA	False	NA	-18	True	NA	NA	NA	157870332	157823732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
Isoform_42171_3	chr2	-	5627	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	21	-4	intron_retention	FALSE	canonical	3	176	junction_6	11.066716867356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGATGAGAGATTTAT	NA	False	NA	-12	True	NA	NA	NA	157870332	157823726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
Isoform_42175_606	chr2	-	3524	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	70	2	0	-2	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGTCTGCCTTGTCCT	8876	False	NA	NA	False	AATAAA	-20	NA	157988286	157958323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
Isoform_42176_49	chr2	-	3589	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	5	2	5	-2	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGTCTGCCTTGTCCT	8811	False	NA	NA	False	AATAAA	-20	NA	157988351	157958323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
Isoform_4218_8	chr10	+	2803	1	Genic_Genomic	ENSMUSG00000035722.16	novel	NA	NA	NA	NA	-10	-16267	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAACACAAAACAAAACA	6000	False	NA	NA	False	NA	NA	NA	79832317	79835120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_79832300_79835100
Isoform_42180_8	chr2	-	861	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	58	14	0	6	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8347	False	NA	-11	True	AATAAA	-18	NA	158203442	158197698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
Isoform_42181_5	chr2	-	965	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.4310598204457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTAAATCTGTGT	8350	False	NA	-10	True	AATAAA	-19	NA	158203439	158197697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202378_158202520_158202862_158202991_158203324
Isoform_42182_19	chr2	-	959	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGCCTTTTAAATCT	8347	False	NA	-14	True	AATAAA	-15	NA	158203442	158197701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
Isoform_42183_3	chr2	-	1100	6	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	36.7456119829293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCAGTCTGCCTTTTAA	8328	False	NA	-18	True	AATAAA	-11	NA	158203461	158197705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158203117_158203324
Isoform_42184_16	chr2	-	887	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGCCTTTTAAATCT	8356	False	NA	-14	True	AATAAA	-15	NA	158203433	158197701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
Isoform_42186_6	chr2	-	2347	4	ISM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	-20	14	0	6	intron_retention	FALSE	canonical	3	82	junction_3	6.79869268479038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8327	False	NA	-11	True	AATAAA	-18	NA	158203462	158197698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862
Isoform_42187_7	chr2	-	1991	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	2	14	-1	6	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTTAAATCTGTG	8349	False	NA	-11	True	AATAAA	-18	NA	158203440	158197698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
Isoform_42188_11	chr2	-	3945	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	-45	-504	-34	504	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGTTTTGCTACTGT	NA	False	NA	0	True	NA	NA	NA	160754282	160747852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
Isoform_4219_4	chr10	+	182	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAACAAAAAACAAAA	2952	False	NA	NA	False	NA	NA	NA	79877462	79877644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_79877500_79877600
Isoform_42190_21	chr2	-	4063	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	-10	-506	-10	505	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTTTTGCTACTGTT	NA	False	NA	1	True	NA	NA	NA	160754258	160747851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
Isoform_42192_3	chr2	-	1493	10	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	-15	17848	-15	4	5prime_fragment	FALSE	canonical	3	41	junction_1	19.8997487421324	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGTGTATTTGACTGGG	NA	False	NA	NA	False	CATAAA	-19	NA	160951010	160867801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
Isoform_42196_66	chr2	-	1633	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	-15	2	-15	-2	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTATTGTGTGTTGTTTC	NA	False	NA	-6	True	NA	NA	NA	163261463	163247743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
Isoform_42198_150	chr2	-	1567	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	44	9	44	-9	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGAGGTATTGTGTG	NA	False	NA	-13	True	NA	NA	NA	163261404	163247750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
Isoform_4220_9	chr10	-	174	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAATTGTGTTCGG	NA	False	NA	NA	False	NA	NA	NA	79947839	79947665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_79947700_79947800
Isoform_42202_6	chr2	-	1957	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	31	1979	31	-1979	multi-exon	FALSE	canonical	3	58	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	163314518	163310277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163312039_163314322
Isoform_42205_133	chr2	-	2246	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	48	1389	42	-1389	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGTGTATTTG	NA	False	NA	-9	True	ATTAAA	-16	NA	163487003	163466580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_42206_47	chr2	-	2283	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	11	1389	5	-1389	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGTGTATTTG	NA	False	NA	-9	True	ATTAAA	-16	NA	163487040	163466580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_42209_3	chr2	-	3609	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	32	42	26	-42	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGTAATAGAGTTCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	163487019	163465233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
Isoform_42211_18	chr2	-	1446	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	12	230	12	-230	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592147	163568733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
Isoform_42212_8	chr2	-	2299	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	1	2	1	-2	multi-exon	FALSE	canonical	3	55	junction_6	196.655155030322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTGGCTCTGACGCAT	5949	False	NA	-7	True	ATTAAA	-14	NA	163913021	163895461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
Isoform_42213_8	chr2	-	1845	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	457	0	457	0	multi-exon	FALSE	canonical	3	55	junction_6	196.655155030322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	6405	False	NA	-5	True	ATTAAA	-16	NA	163912565	163895459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
Isoform_42215_301	chr2	-	1855	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	68	0	1	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5949	False	NA	-5	True	ATTAAA	-16	NA	163913021	163895459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
Isoform_42216_132	chr2	-	1906	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	17	0	17	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5898	False	NA	-5	True	ATTAAA	-16	NA	163913072	163895459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
Isoform_42217_7	chr2	-	2276	2	ISM	ENSMUSG00000040164.4	ENSMUST00000045196.4	2712	4	2422	1	2422	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGGTCATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	164010611	164005539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164006936_164009731
Isoform_42219_5	chr2	-	492	3	FSM	ENSMUSG00000051769.3	ENSMUST00000063251.3	488	3	-23	19	-23	-19	multi-exon	FALSE	canonical	3	20	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAACTAAAAATACAT	NA	False	NA	NA	False	ATTAAA	-19	NA	164042073	164040801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164040933_164041577_164041737_164041871
Isoform_42220_28	chr2	-	2454	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	4	0	-4	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCCTGTCAGTTTTATT	NA	False	NA	43	True	AATAAA	-20	NA	164285106	164266170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
Isoform_42225_68	chr2	-	1101	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	51	0	-9	0	multi-exon	TRUE	canonical	3	284	junction_4	26.9250812440743	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_42226_37	chr2	-	1144	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	6	2	5	-2	multi-exon	FALSE	canonical	3	284	junction_4	26.9250812440743	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGCTGACCTTTAATAG	8172	False	NA	-3	True	AATAAA	-17	NA	164646796	164634689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
Isoform_42227_7	chr2	-	960	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	50	7	-9	-4	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTAGCTGACCTTTAAT	8217	False	NA	-5	True	AATAAA	-15	NA	164646751	164634691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
Isoform_42228_3	chr2	-	411	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	607	-4	607	4	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGTCTCCTTGCCTCT	NA	False	NA	NA	False	AATAAA	-28	NA	164674769	164672647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164672908_164674618
Isoform_42229_3	chr2	-	1030	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	-18	2	-18	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTGGAGGGTCTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	164675394	164672653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164672908_164674618
Isoform_4223_10	chr10	+	1324	1	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	9	-12060	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	80100826	80102150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80100800_80102200
Isoform_42231_17	chr2	-	1970	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	253	3	253	-3	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699209	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
Isoform_42232_39	chr2	-	1910	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	314	2	314	-2	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGGTTTCTCTAGCTC	NA	False	NA	-3	True	NA	NA	NA	164699148	164681439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
Isoform_42233_8	chr2	-	2233	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	-10	3	-10	-3	multi-exon	FALSE	canonical	3	336	junction_14	23.0625812315366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699472	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
Isoform_42237_14	chr2	-	1775	16	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	95.1360195836583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699561	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
Isoform_42238_336	chr2	-	1736	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	70	3	-8	-3	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699561	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_42239_156	chr2	-	1778	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	28	3	28	-3	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699603	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_42240_25	chr2	-	2177	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	-371	3	-371	-3	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164700002	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
Isoform_42247_8	chr2	-	1754	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	91.9865690679291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699513	164681440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699437
Isoform_42249_3	chr2	-	4725	27	ISM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	496	10	496	-10	3prime_fragment	FALSE	canonical	3	65	junction_13	19.3627776871841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753181	164733811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
Isoform_42250_4	chr2	-	4454	27	ISM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	771	6	771	-6	3prime_fragment	TRUE	canonical	3	65	junction_13	19.3627776871841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTCTCTTTGTATAT	NA	False	NA	-6	True	AATAAA	-19	NA	164752906	164733807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
Isoform_42251_14	chr2	-	4417	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	160	10	160	-10	multi-exon	FALSE	canonical	3	65	junction_13	19.1818958999235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753517	164733811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
Isoform_42252_5	chr2	-	4494	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	161	-10	intron_retention	FALSE	canonical	3	65	junction_13	19.3627776871841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753516	164733811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
Isoform_42253_43	chr2	-	3160	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	-39	-4	2	1	multi-exon	FALSE	canonical	3	14	junction_1	35.3784207259344	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3022	False	NA	-8	True	ATTAAA	-13	NA	164876747	164842278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_42254_217	chr2	-	3117	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	60	2	-4	1	multi-exon	TRUE	canonical	3	73	junction_1	19.1790702249582	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGCTAATCTTTCTT	3042	False	NA	-8	True	ATTAAA	-13	NA	164876727	164842278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_42255_11	chr2	-	3161	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	15	3	15	0	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	2997	False	NA	-9	True	ATTAAA	-12	NA	164876772	164842279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
Isoform_42256_10	chr2	-	3052	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.2812171439856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	3042	False	NA	-6	True	ATTAAA	-15	NA	164876727	164842276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164876602
Isoform_42257_21	chr2	-	2074	6	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	92540	2	39146	-2	3prime_fragment	FALSE	canonical	2	10	junction_5	4.63033476111609	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTATCCTTGTGGTTA	NA	False	NA	-7	True	NA	NA	NA	164984233	164953428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973
Isoform_42258_13	chr2	-	2307	7	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	90978	-3	37584	3	3prime_fragment	FALSE	canonical	2	10	junction_5	5.30461015427985	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTTGTGGTTACTAGC	NA	False	NA	-2	True	NA	NA	NA	164985795	164953423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
Isoform_42259_4	chr2	-	3126	11	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	53668	3	274	-3	3prime_fragment	TRUE	canonical	0	0	junction_10	8.62554346113913	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGTTATCCTTGTGGTT	NA	False	NA	-8	True	NA	NA	NA	165023105	164953429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561_164985756_164988524_164988693_164999169_164999290_165012542_165012838_165022823
Isoform_4226_25	chr10	+	3037	1	NIC	ENSMUSG00000035504.17	novel	2208	6	NA	NA	4	-1247	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	7223	False	NA	NA	False	NA	NA	NA	80165982	80169019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80166000_80169000
Isoform_42260_9	chr2	-	1977	6	ISM	ENSMUSG00000053166.15	ENSMUST00000138643.2	2521	11	39182	-819	39182	-1	3prime_fragment	FALSE	canonical	1	4	junction_5	6.91664658631623	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTATCCTTGTGGTTAC	NA	False	NA	-6	True	NA	NA	NA	164984197	164953427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164984035
Isoform_42264_11	chr2	-	1827	11	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	81.3242891146304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5721	False	NA	-34	True	AATAAA	-18	NA	165129728	165118473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125524_165129703
Isoform_42265_19	chr2	-	1994	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	0	-3	0	3	multi-exon	FALSE	canonical	2	10	junction_9	78.2020175926143	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAGACTACCAGTG	5774	False	NA	-31	True	AATAAA	-21	NA	165129675	165118470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
Isoform_42266_90	chr2	-	2007	10	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	0	33	intron_retention	TRUE	canonical	3	63	junction_9	61.9452167365908	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCATTCCGGCTCTGC	5691	False	NA	-1	True	NA	NA	NA	165129758	165118440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129703
Isoform_42267_137	chr2	-	1964	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	61	-17	16	17	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCCTCAGCCCAGATT	5721	False	NA	-17	True	AATAAA	-35	NA	165129728	165118456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
Isoform_42268_60	chr2	-	1980	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	31	-3	0	3	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAGACTACCAGTG	5691	False	NA	-31	True	AATAAA	-21	NA	165129758	165118470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
Isoform_42270_6	chr2	-	3461	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-5	2	combination_of_known_junctions	TRUE	canonical	3	11	junction_3	74.0802774022884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCTATCCACACCTC	NA	False	NA	-15	True	AATAAA	-17	NA	165168404	165131072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_42271_8	chr2	-	3501	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_12	97.9880829442692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168398	165131074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_42272_4	chr2	-	3447	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	75.0502997995344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCTATCCACACCT	NA	False	NA	-16	True	AATAAA	-16	NA	165168385	165131073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_42276_195	chr2	-	3456	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	10	0	10	0	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168389	165131074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
Isoform_42280_5	chr2	-	5074	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-41	3172	-41	-3172	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTGAGACTTTTA	4499	False	NA	-3	True	ATTAAA	-14	NA	165230220	165219355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
Isoform_42281_295	chr2	-	1869	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	11	0	-11	multi-exon	FALSE	canonical	3	240	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAACAGTTTTCGGA	NA	False	NA	-28	True	NA	NA	NA	165335244	165332040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165333632_165334966
Isoform_42284_7	chr2	-	2251	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	-371	0	371	multi-exon	FALSE	canonical	3	240	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGTGGGCTGTACAAG	NA	False	NA	NA	False	AATAAA	-25	NA	165335244	165331658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165333632_165334966
Isoform_42288_5	chr2	-	3230	10	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	43843	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.4703784233791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165650199	165626075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165626691_165626710_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438
Isoform_42289_11	chr2	-	3234	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	165740930	165627227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_42290_3	chr2	-	3280	20	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.691674028171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165740903	165627229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_42291_3	chr2	-	3204	19	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	402	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	177.634395304124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165703523	165627229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
Isoform_42292_5	chr2	-	2729	10	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	44190	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.3977759503657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165649852	165626073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165626691_165626710_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594
Isoform_42293_4	chr2	-	1941	9	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	49895	1156	43844	1	3prime_fragment	FALSE	canonical	3	102	junction_8	24.3871764458291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	165650198	165627227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594
Isoform_42295_3	chr2	-	3855	23	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	190.404245907238	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	165740898	165627227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679256_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_42296_8	chr2	-	3051	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.212551861858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165726597	165627229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
Isoform_42297_8	chr2	-	3049	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165740903	165627229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_42298_4	chr2	-	4228	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740926	165626073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_42299_5	chr2	-	3118	20	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.564509023521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165740897	165627229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_42300_3	chr2	-	4271	20	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	174.44831918503	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740895	165626073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679256_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
Isoform_42301_14	chr2	-	658	6	FSM	ENSMUSG00000039671.19	ENSMUST00000136842.2	629	6	14	-43	14	43	multi-exon	FALSE	canonical	3	218	junction_5	120.234104978579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTCTACCACCGAGC	NA	False	NA	NA	False	AATATA	-36	NA	165740922	165681917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
Isoform_4231_4	chr10	-	175	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATCCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	80441710	80441535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_80441500_80441700
Isoform_42316_11	chr2	-	3753	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	236	3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165996969	165915830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
Isoform_42317_57	chr2	-	3760	21	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	182.354352840836	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165996768	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
Isoform_42320_216	chr2	-	3673	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	255	-1	-224	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165996950	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_42321_37	chr2	-	3771	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	157	-1	157	1	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997048	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_42322_9	chr2	-	3801	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	134	-8	134	2	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGACTTTTTTGCTC	NA	False	NA	-8	True	NA	NA	NA	165997071	165915831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
Isoform_42326_93	chr2	-	3743	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	7	830	7	1	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997576	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
Isoform_42328_41	chr2	-	3788	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-38	830	-38	1	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997621	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
Isoform_42331_9	chr2	-	3890	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-93	1	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_20	188.49392563157	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165997298	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996997
Isoform_42334_17	chr2	-	3700	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_20	191.779143808705	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTATCTTGGGACTTT	NA	False	NA	-15	True	NA	NA	NA	165996765	165915838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996654
Isoform_42338_4	chr2	-	3205	7	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	84	-2	intron_retention	FALSE	canonical	0	0	junction_6	13.2748718344933	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAACTCATTCTTGACT	NA	False	NA	-8	True	AATAAA	-42	NA	166349907	166341962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349381_166349480_166349807
Isoform_42339_3	chr2	-	3116	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	61	-16	intron_retention	FALSE	canonical	3	12	junction_5	9.90757286120067	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAATTAAAAAACCCA	NA	False	NA	-22	True	AATAAA	-28	NA	166349930	166341976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349807
Isoform_4234_71	chr10	+	509	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	22	82	22	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAGTCATGTGTATTT	NA	False	NA	NA	False	AATGAA	-26	NA	11484988	11485497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11485000_11485500
Isoform_42340_5	chr2	-	6521	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	10	2	10	-2	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTGTGGCCTGCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	166555742	166408263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
Isoform_42341_37	chr2	-	2975	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	3	591	3	7	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCCAATTGAGCAGT	NA	False	NA	-14	True	AATAAA	-16	NA	166838195	166790059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_42343_123	chr2	-	2812	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	32	725	19	-1	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTGTTAATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	166838166	166790193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_42345_71	chr2	-	2827	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	20	129	20	-3	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTTTTGTTAATTT	NA	False	NA	NA	False	AATAAA	-10	NA	166838165	166790195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_42346_45	chr2	-	2961	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	19	-4	19	4	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTTTCCAATTGAGC	NA	False	NA	-17	True	AATAAA	-13	NA	166838166	166790062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
Isoform_4235_13	chr10	+	666	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	14	-67	14	67	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCTTTCTAGAATTTG	NA	False	NA	NA	False	TATAAA	-16	NA	11484980	11485646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11485000_11485600
Isoform_42350_5	chr2	-	3710	2	FSM	ENSMUSG00000050556.10	ENSMUST00000207917.2	11153	2	26	7417	26	26	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGCACTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	167030712	166945305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_166948280_167029976
Isoform_42351_39	chr2	-	1118	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19240	285	-12948	-285	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCCAAATCGGGCTG	NA	False	NA	-29	True	AATAAA	-24	NA	167063284	167045111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
Isoform_42352_13	chr2	-	1816	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	3	288	3	-288	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	5250	False	NA	-32	True	AATAAA	-21	NA	167082521	167045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
Isoform_42354_3	chr2	-	1167	7	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-13861	-288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.8675134594813	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	NA	False	NA	-32	True	AATAAA	-21	NA	167064197	167045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167064141
Isoform_42356_34	chr2	-	4176	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	32	2	32	-2	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGTAGTCGTCTCTC	NA	False	NA	-3	True	AGTAAA	-21	NA	167191071	167140365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
Isoform_42358_3	chr2	-	3933	4	NIC	ENSMUSG00000047030.16	novel	1531	4	NA	NA	2	32	intron_retention	FALSE	canonical	1	1	junction_2	24.9844396019247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTGTTCATGGTGTT	4593	False	NA	NA	False	AATAAA	-17	NA	167334796	167323320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_167326500_167327077_167327514_167331088_167331289_167334678
Isoform_42359_45	chr2	-	3731	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	13	268	-2	32	multi-exon	FALSE	canonical	3	52	junction_2	1	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTGTTCATGGTGTT	4595	False	NA	NA	False	AATAAA	-17	NA	167334794	167323320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167326500_167327077_167327514_167334678
Isoform_4236_5	chr10	-	204	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGTCCC	7777	False	NA	NA	False	NA	NA	NA	80579529	80579325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_80579300_80579500
Isoform_42360_3	chr2	-	4000	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	13	-1	-2	1	multi-exon	FALSE	canonical	3	52	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCGAAGATTTTTTTCT	4595	False	NA	NA	False	ATTAAA	-18	NA	167334794	167323051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167326500_167327077_167327514_167334678
Isoform_42362_28	chr2	-	1836	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	8	-920	0	-2	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGGTGGTTTTATTTT	9434	False	NA	NA	False	AATAAA	-20	NA	167473899	167449765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
Isoform_42363_841	chr2	-	1719	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	116	206	0	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9434	False	NA	NA	False	AATAAA	-22	NA	167473899	167449763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
Isoform_42368_57	chr2	-	2349	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-21	1	-21	-1	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTATTATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503497	167484528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_42369_18	chr2	-	1761	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-49	617	-49	3	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTGCCGTGTGGTGT	NA	False	NA	-5	True	AATATA	-28	NA	167503525	167485144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_42371_5	chr2	-	2781	5	NIC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-17	0	intron_retention	FALSE	canonical	3	233	junction_2	10.6389614154766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTGGTTGCCGTGTGG	NA	False	NA	-8	True	AATATA	-25	NA	167503493	167485147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_167486103_167486683_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_42372_3	chr2	-	3415	5	NIC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-19	12	intron_retention	FALSE	canonical	3	233	junction_2	10.6389614154766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTTTGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	167503495	167484515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_167486103_167486683_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_42373_4	chr2	-	2267	5	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	-34	35375	-34	-35375	5prime_fragment	FALSE	canonical	3	221	junction_1	16.0214699700121	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTGCCGTGTGGTGT	NA	False	NA	-5	True	AATATA	-28	NA	167503450	167485144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
Isoform_42374_7	chr2	-	1292	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	19	-2	19	2	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAGCTACTTTATTTG	7148	False	NA	-2	True	NA	NA	NA	167996414	167994520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_167995672_167996273
Isoform_42375_53	chr2	-	1040	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	17	1236	0	-2	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTGCTTTCATTT	NA	False	NA	-22	True	AATAAA	-20	NA	168072282	168052203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_42377_113	chr2	-	854	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	17	1422	0	46	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTTATCAATGTTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	168072282	168052389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
Isoform_4238_7	chr10	+	1295	1	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	38961	0	2713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	321	False	NA	16	True	AATAAA	-20	NA	80630000	80631295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_80630000_80631300
Isoform_42380_3	chr2	-	4065	3	FSM	ENSMUSG00000074575.5	ENSMUST00000109191.2	4089	3	28	-4	28	4	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCTCTGGTGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	168123024	168102032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168105071_168110388_168111189_168122797
Isoform_42382_16	chr2	-	2601	16	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-72	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	72.489508819476	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	2929	False	NA	-26	True	GATAAA	-13	NA	168512338	168476360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511919
Isoform_42384_11	chr2	-	3135	23	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	44836	1	-19157	-1	3prime_fragment	TRUE	canonical	3	231	junction_21	28.7459662998549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	NA	False	NA	-24	True	GATAAA	-15	NA	168531423	168476358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218
Isoform_42387_117	chr2	-	3632	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	96	1	96	-1	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	NA	False	NA	-24	True	GATAAA	-15	NA	168576163	168476358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_42388_24	chr2	-	3684	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	42	3	42	-3	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	NA	False	NA	-26	True	GATAAA	-13	NA	168576217	168476360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_4239_11	chr10	+	1164	1	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	39092	0	2844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	452	False	NA	16	True	AATAAA	-20	NA	80630131	80631295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_80630100_80631300
Isoform_42390_32	chr2	-	3504	28	FSM	ENSMUSG00000027546.16	ENSMUST00000029060.11	3529	28	24	1	24	-1	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6647	False	NA	-24	True	GATAAA	-15	NA	168583696	168476358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
Isoform_42391_29	chr2	-	3455	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6290	False	NA	-24	True	GATAAA	-15	NA	168584053	168476358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
Isoform_42392_3	chr2	-	3522	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-9586	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	58.3027433020369	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6968	False	NA	-24	True	GATAAA	-15	NA	168564468	168476358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168564355
Isoform_42393_3	chr2	-	2525	14	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	88	32712	88	-71	5prime_fragment	FALSE	canonical	3	71	junction_13	52.9239713699013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGATTTCTTTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	168576171	168509069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_42394_3	chr2	-	2600	14	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	84	32641	84	0	5prime_fragment	FALSE	canonical	3	71	junction_13	52.9239713699013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGTGTTTATTATTA	NA	False	NA	NA	False	AAGAAA	-18	NA	168576175	168508998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
Isoform_42406_24	chr2	-	5105	4	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-174	-5	intron_retention	FALSE	canonical	3	69	junction_3	260.140133176119	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCGGGCTTGTGTGT	NA	False	NA	-22	True	AATAAA	-17	NA	168607340	168590256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607013
Isoform_42407_53	chr2	-	5066	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	2	5	2	-5	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCGGGCTTGTGTGT	NA	False	NA	-22	True	AATAAA	-17	NA	168609119	168590256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
Isoform_42409_6	chr2	-	5157	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	-90	6	-90	-6	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGAGGCGGGCTTGTGTG	NA	False	NA	-23	True	AATAAA	-16	NA	168609211	168590257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
Isoform_42410_152	chr2	-	5015	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	55	3	-29	-3	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609066	168590254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
Isoform_42417_15	chr2	-	3698	4	FSM	ENSMUSG00000027547.18	ENSMUST00000103074.2	3741	4	40	3	40	-3	multi-exon	FALSE	canonical	3	42	junction_2	261.72037665332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609081	168590254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168592381_168594373_168594661_168597685_168598721_168608831
Isoform_42418_5	chr2	-	3461	2	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	82	5216	-2	1367	5prime_fragment	FALSE	canonical	3	532	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCTCTGTTTTCTTT	NA	False	NA	0	True	CATAAA	-22	NA	168609039	168595467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168598721_168608831
Isoform_42419_5	chr2	-	3429	2	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	109	5221	25	1362	5prime_fragment	FALSE	canonical	3	532	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGAGCCTCTGTTT	NA	False	NA	-5	True	CATAAA	-17	NA	168609012	168595472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168598721_168608831
Isoform_42420_31	chr2	-	2036	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	30	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATGTGAGCGTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	168754523	168735252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
Isoform_42421_38	chr2	-	1997	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	63	-8	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGAGGGATGTGAGCG	NA	False	NA	NA	False	AATAAA	-14	NA	168754490	168735258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
Isoform_42422_9	chr2	-	2511	9	FSM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	329	8	8	-8	multi-exon	FALSE	canonical	3	7	junction_4	271.408824469655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGAGGGATGTGAGCG	NA	False	NA	NA	False	AATAAA	-14	NA	168797178	168735258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_42425_223	chr2	-	2440	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-7	5	-7	-5	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTATAGTTTGTATTGTAT	NA	False	NA	-5	True	AATAAA	-24	NA	168797199	168767285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_42426_28	chr2	-	2731	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-293	0	22	0	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168797485	168767280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_42428_26	chr2	-	976	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	26	7	3	-7	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTGTTACTGTTGT	NA	False	NA	-8	True	TATAAA	-12	NA	168797183	168776739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_4243_3	chr10	+	675	1	NIC	ENSMUSG00000035011.16	novel	5938	3	NA	NA	1	-6866	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	80972400	80973075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_80972400_80973100
Isoform_42430_4	chr2	-	1942	4	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	24	3822	1	-3822	5prime_fragment	FALSE	canonical	3	552	junction_1	42.967688118192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	168797185	168780554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_42431_4	chr2	-	1383	4	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	10	4395	-7	-4395	5prime_fragment	FALSE	canonical	3	552	junction_1	42.967688118192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	168797199	168781127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_168781954_168782656_168782819_168793464_168793699_168797038
Isoform_42432_3	chr2	-	1602	2	ISM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-784	14	1	intron_retention	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4160	False	NA	-2	True	AATAAA	-19	NA	170191701	170189066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_170190069_170191101
Isoform_42433_10	chr2	-	1326	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-13	-942	-13	1	multi-exon	FALSE	canonical	3	30	junction_2	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4133	False	NA	-2	True	AATAAA	-19	NA	170191728	170189066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_170190069_170191101_170191384_170191686
Isoform_42434_4	chr2	-	1496	4	FSM	ENSMUSG00000013523.14	ENSMUST00000133673.8	688	4	-13	-795	-13	-2	multi-exon	FALSE	canonical	3	7	junction_2	32.9983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATACTTGAGGTGGTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	170199046	170189069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_170190069_170191101_170191384_170198167_170198234_170198897
Isoform_42435_46	chr2	-	1918	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-15	2	0	-2	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212441	172198117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
Isoform_42437_528	chr2	-	1840	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	14	8	0	-2	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212441	172198117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
Isoform_42440_9	chr2	-	2081	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	-381	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	431.844300645499	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212836	172198117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212546
Isoform_42442_9	chr2	-	2524	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1025	junction_7	145.890789459032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212441	172198117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
Isoform_42446_64	chr2	-	2254	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-255	1671	-255	-1671	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACGTTACAGATATAT	NA	False	NA	-35	True	AATAAA	-19	NA	172782369	172711475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
Isoform_42449_10	chr2	+	1748	12	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	0	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	251.140045221883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171881	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42451_10	chr2	+	1794	12	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	22	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	251.140045221883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171835	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42452_125	chr2	+	1792	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-47	-29	21	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171834	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42454_127	chr2	+	1745	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	0	-29	0	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171881	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42455_21	chr2	+	1872	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-150	-6	-67	6	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAATAAAAATTAAAAATGA	NA	False	NA	-11	True	ATTAAA	-4	NA	174171731	174188511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42466_9	chr2	+	1961	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-216	-29	-133	-3	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171665	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42470_15	chr2	+	1708	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	78	3	-5	-3	multi-exon	FALSE	non_canonical	0	0	junction_2	262.324150622851	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	NA	False	NA	12	True	AATAAA	-16	NA	174171876	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42473_10	chr2	+	1732	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109084.8	1695	11	-42	5	34	-5	multi-exon	FALSE	canonical	3	59	junction_2	245.35078968693	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATACGGTGTTGCTCTT	NA	False	NA	10	True	AATAAA	-14	NA	174171847	174188532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174172228_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_42478_593	chr2	-	1375	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	65	1	65	-1	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGTACTTTATTTAC	5394	False	NA	-1	True	AGTAAA	-16	NA	174280767	174269286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
Isoform_42480_561	chr2	-	402	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	16	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305882	174302867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174303015_174304292_174304423_174305757
Isoform_42481_165	chr2	-	1407	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	136	10	-11	-10	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAGACAGAAGAGCAG	NA	False	NA	-14	True	AATAAA	-35	NA	174314738	174306869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
Isoform_42483_25	chr2	-	1455	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	88	10	-59	-10	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGAGACAGAAGAGCAG	NA	False	NA	-14	True	AATAAA	-35	NA	174314786	174306869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
Isoform_42487_5	chr2	-	1831	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	-18	-1249	-18	-508	multi-exon	FALSE	canonical	3	40	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGTAATATTATGTTA	NA	False	NA	NA	False	NA	NA	NA	174909592	174903849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174905454_174905660_174905788_174909492
Isoform_42489_4	chr2	-	1426	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	-25	-436	-7	436	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	175048717	175038298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
Isoform_42490_6	chr2	+	1336	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	19	90	-7	-90	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	175661030	175671359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
Isoform_42491_5	chr2	-	1240	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	-3	2201	-3	-315	multi-exon	FALSE	canonical	3	24	junction_1	41.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGCTATAAATGTG	NA	False	NA	NA	False	NA	NA	NA	175592889	175583350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_175584326_175584530_175584658_175592751
Isoform_42492_3	chr2	-	462	5	NIC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-27	680	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	176898241	176885961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_42493_5	chr2	-	1218	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-30	-276	-30	276	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGAGTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	176898244	176886365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
Isoform_42494_5	chr2	-	282	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5328	-845	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCATGACTGTAACCAA	NA	False	NA	-40	True	NA	NA	NA	176964157	176957291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_176957402_176958542_176958604_176964046
Isoform_42495_4	chr2	-	586	7	FSM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	9	-7	8	7	multi-exon	FALSE	canonical	3	26	junction_4	128.500324253806	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	177090104	177079686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177085086_177085189_177086489_177086545_177090016
Isoform_42496_10	chr2	+	501	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-23	266	-23	-266	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	177401057	177411489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_42497_7	chr2	+	458	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3011	663	combination_of_known_junctions	FALSE	canonical	3	515	junction_3	284.818460700067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	174855122	174860068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174855276_174858430_174858558_174858749_174858811_174859951
Isoform_42498_8	chr2	+	456	5	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-15	663	combination_of_known_junctions	FALSE	canonical	3	233	junction_1	354.600743795046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	174852018	174860068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749_174858811_174859951
Isoform_42499_10	chr2	-	496	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-68	-986	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAACACCATGACTGT	2269	False	NA	NA	False	NA	NA	NA	177270071	177261982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
Isoform_4250_6	chr10	+	175	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGATCA	NA	False	NA	NA	False	NA	NA	NA	81117730	81117905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_81117700_81117900
Isoform_42500_25	chr2	-	408	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-30	970	-19	-970	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAACCAATGTGGTAAAG	2318	False	NA	NA	False	NA	NA	NA	177270022	177261966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
Isoform_42501_3	chr2	-	1321	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108943.2	531	4	3042	-726	3031	726	3prime_fragment	FALSE	canonical	3	782	junction_2	220	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	5379	False	NA	NA	False	NA	NA	NA	177266961	177262293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_177263288_177263479_177263607_177266761
Isoform_42503_7	chr2	-	1327	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-8	1169	3	854	5prime_fragment	FALSE	canonical	3	827	junction_2	197.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATTCATACAGATAAA	2340	False	NA	NA	False	NA	NA	NA	177270000	177262165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_177263288_177263479_177263607_177269922
Isoform_42504_4	chr2	-	1239	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-52	1301	-41	722	5prime_fragment	FALSE	canonical	3	827	junction_2	197.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTGTTCCCATTTC	2296	False	NA	NA	False	NA	NA	NA	177270044	177262297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_177263288_177263479_177263607_177269922
Isoform_42505_16	chr2	-	1056	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-759	-5	759	multi-exon	FALSE	canonical	3	312	junction_1	213.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	-5	True	NA	NA	NA	177482116	177475262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_42510_7	chr2	-	1405	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-42	-1053	-42	1053	multi-exon	FALSE	canonical	3	312	junction_1	213.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATTCATACAGATAAA	NA	False	NA	NA	False	NA	NA	NA	177482171	177474968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177476105_177476312_177476440_177482029
Isoform_42517_20	chr2	-	1362	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	7	3	7	-3	multi-exon	FALSE	canonical	3	51	junction_1	29	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAAATTTTAAAAGAAT	NA	False	NA	-17	True	NA	NA	NA	177720262	177710285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177711409_177711615_177711743_177720150
Isoform_42518_4	chr2	-	1187	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-19	204	-19	-204	multi-exon	FALSE	canonical	3	51	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGAGTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	177720288	177710486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_177711409_177711615_177711743_177720150
Isoform_42520_1099	chr2	-	908	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	5	1	5	-1	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGATGAGAACCTGT	NA	False	NA	-13	True	AATAAA	-16	NA	179684221	179678167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
Isoform_42521_393	chr2	-	937	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-18	-5	-18	5	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684244	179678161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
Isoform_42525_8	chr2	-	3683	2	FSM	ENSMUSG00000039059.12	ENSMUST00000166392.2	1040	2	-1136	-1507	17	-12	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGCTGACTTTTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	179746264	179741269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_179743210_179744521
Isoform_42526_6	chr2	-	2714	3	FSM	ENSMUSG00000039059.12	ENSMUST00000056480.10	2706	3	-11	3	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGGGGACTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	179746292	179741260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_179743210_179744521_179744689_179745694
Isoform_42530_4	chr2	-	3567	22	ISM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	43390	3	-2826	-3	3prime_fragment	FALSE	canonical	3	206	junction_19	45.9620271148688	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179824262	179818168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150
Isoform_42531_3	chr2	-	2516	14	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-501	0	intron_retention	TRUE	canonical	3	256	junction_11	29.6426447965181	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179821937	179818165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821752_179821866
Isoform_42532_70	chr2	-	2943	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	31	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915258	179900333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
Isoform_42537_4	chr2	-	2903	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
Isoform_42538_4	chr2	-	2418	8	ISM	ENSMUSG00000038914.16	ENSMUST00000103057.8	4906	15	-63	6530	-63	-5605	5prime_fragment	FALSE	canonical	3	75	junction_2	44.2391460226836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAGTAGGAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	180351855	180316610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_42539_29	chr2	-	4662	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-49	0	-49	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351841	180322850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
Isoform_4254_5	chr10	-	2099	1	NIC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	-746	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81237134	81235035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_81235000_81237100
Isoform_42547_226	chr2	-	3191	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-8	1	-8	-1	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTCTTGTTTT	NA	False	NA	-3	True	NA	NA	NA	180562750	180546170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
Isoform_42548_6	chr2	-	3249	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-66	1	-66	-1	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTCTTGTTTT	NA	False	NA	-3	True	NA	NA	NA	180562808	180546170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
Isoform_42550_39	chr2	-	932	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	15	3	10	-3	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACAATTCGCATCCCT	NA	False	NA	NA	False	NA	NA	NA	180596477	180576567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
Isoform_42551_3	chr2	-	1418	8	ISM	ENSMUSG00000016346.18	ENSMUST00000139458.8	1816	11	-101	8307	-17	3671	5prime_fragment	FALSE	canonical	2	6	junction_1	2.97609523657138	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGATTCTGTGTGGTTT	NA	False	NA	NA	False	TTTAAA	-45	NA	180777071	180746565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
Isoform_42552_18	chr2	-	4073	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	45	3	26	-3	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGTGTGTTTGTCTCTTG	6221	False	NA	-7	True	AATAAA	-13	NA	180929783	180893244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
Isoform_42554_47	chr2	-	924	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	213	-1	213	1	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTGGCTTTTCATT	NA	False	NA	-5	True	AATAAA	-17	NA	180956080	180948250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
Isoform_42555_6	chr2	-	2663	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	-17	-824	0	-606	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTAGATGGTGGTTCC	6129	False	NA	-7	True	AATAAA	-26	NA	181007144	181000283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
Isoform_42556_14	chr2	-	898	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTGTAGGTATTCAG	6129	False	NA	NA	False	NA	NA	NA	181007144	181001108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
Isoform_42557_51	chr2	-	1749	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	40	658	-3	-606	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTAGATGGTGGTTCC	6116	False	NA	-7	True	AATAAA	-26	NA	181007157	181000283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_42558_94	chr2	-	914	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	53	1480	0	2	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGTATTCAGAGA	6129	False	NA	NA	False	NA	NA	NA	181007144	181001105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_4256_4	chr10	+	1205	1	FSM	ENSMUSG00000074862.12	ENSMUST00000099442.4	2785	1	-730	2310	-8	-2046	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	81442128	81443333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_81442100_81443300
Isoform_42560_3	chr2	-	815	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	19	1484	-3	2	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGTATTCAGAGA	6157	False	NA	NA	False	NA	NA	NA	181007116	181001105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
Isoform_42561_20	chr2	-	2581	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	-7	3	-7	-3	multi-exon	FALSE	canonical	3	29	junction_1	2	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGTCTGCTCTCTTT	8531	False	NA	-5	True	AATAAA	-14	NA	181101226	181052340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181053774_181065211_181066182_181101048
Isoform_42562_29	chr2	-	1817	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	26	6	-4	-3	multi-exon	FALSE	canonical	3	84	junction_14	14.4936650482413	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCGTGTGGCAGAAT	4573	False	NA	-5	True	AATAAA	-17	NA	181223775	181210947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_42564_3	chr2	-	1903	13	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	17	junction_6	29.3976567471325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGATCGTGTGGCAGA	4573	False	NA	-7	True	AATAAA	-15	NA	181223775	181210949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
Isoform_42565_6	chr2	-	2125	5	FSM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	7	-1	7	1	multi-exon	FALSE	canonical	3	8	junction_4	19.6850196850295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCAGTGTTGGGTCT	1050	False	NA	-4	True	AATAAA	-12	NA	181240984	181237012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239387_181240724
Isoform_42566_14	chr2	-	2143	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	25	-4	11	4	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGGGTCTCTGGGG	1054	False	NA	2	True	AATAAA	-18	NA	181240980	181237006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
Isoform_42568_4	chr2	-	895	6	NIC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	48.4090900554844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTTTCAAGTTGCT	NA	False	NA	-12	True	AATAAA	-17	NA	181335728	181330211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_181330512_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
Isoform_4257_3	chr10	+	776	1	NIC	ENSMUSG00000054708.18	novel	3161	15	NA	NA	0	-1424	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7966	False	NA	NA	False	NA	NA	NA	81469532	81470308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_81469500_81470300
Isoform_42570_21	chr2	-	1465	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	46	0	-1	0	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335724	181330214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
Isoform_42571_9	chr2	-	1362	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	13	-596	-4	0	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335727	181330214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
Isoform_42573_385	chr2	-	869	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1746	-8	multi-exon	FALSE	canonical	3	698	junction_1	0	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACGGTCCGGGCTGTG	923	False	NA	-11	True	AATAAA	-9	NA	162931521	162928961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_162929768_162931458
Isoform_42574_298	chr2	-	750	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1753	-8	multi-exon	FALSE	canonical	3	735	junction_1	0	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACGGTCCGGGCTGTG	916	False	NA	-11	True	AATAAA	-9	NA	162931528	162928961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_162929642_162931458
Isoform_42576_109	chr2	-	3682	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	13	-46	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268468	94242072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
Isoform_42579_18	chr2	-	2955	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	11	-12	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471936	130455771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130458626_130471835
Isoform_4258_3	chr10	+	2661	1	Genic_Genomic	ENSMUSG00000096856.8	novel	NA	NA	NA	NA	-17	-12529	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAGCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	81484875	81487536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_81484900_81487500
Isoform_42580_23	chr2	-	3088	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	25	-12	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACATTGATCCACAAA	NA	False	NA	-17	True	AATAAA	-13	NA	130471922	130455771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_130458626_130470408_130470556_130471835
Isoform_42581_13	chr2	-	739	4	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTGGAATCTTTCTTT	NA	False	NA	-9	True	AATAAA	-13	NA	26530256	26527190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
Isoform_42582_11	chr2	-	829	7	NNC	ENSMUSG00000027618.18	novel	1649	4	NA	NA	0	6392	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	101.365674663566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAATAT	3106	False	NA	NA	False	NA	NA	NA	155986106	155974034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_155974157_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
Isoform_42583_5	chr2	-	362	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	7342	False	NA	NA	False	NA	NA	NA	77139809	77117279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_77117450_77139617
Isoform_42584_8	chr2	-	657	4	NNC	ENSMUSG00000078861.9	novel	1372	3	NA	NA	-29	12806	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	39.4743235815666	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACCTGGAAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	177720298	177696681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_177697003_177711347_177711409_177711615_177711743_177720150
Isoform_42585_8	chr2	-	544	3	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	0	True	NA	NA	NA	170515750	170512871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_170513139_170515342_170515518_170515648
Isoform_42586_5	chr2	-	2358	2	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166279607	166273866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_166276134_166279516
Isoform_42587_3	chr2	-	699	4	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTGTAGTCAGTTAT	NA	False	NA	NA	False	NA	NA	NA	172136502	172132002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_172132278_172134257_172134405_172135339_172135530_172136415
Isoform_42589_5	chr2	-	3113	22	NNC	ENSMUSG00000037110.21	novel	3730	16	NA	NA	-35	1279	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.102589898328	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAGAATACCTC	NA	False	NA	NA	False	AATAAA	-7	NA	146353981	146245475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_146245609_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
Isoform_4259_9	chr10	+	1552	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTATGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	81832842	81834394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_81832800_81834400
Isoform_42590_3	chr2	-	1607	2	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	-2	True	NA	NA	NA	166096602	166094480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_166095994_166096508
Isoform_42591_3	chr2	-	1451	12	NNC	ENSMUSG00000017697.4	novel	1688	12	NA	NA	10	-230	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	19.317700528764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592149	163568733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_-_163568972_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
Isoform_42592_3	chr2	-	3156	2	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTAGGACTTTTTCTGA	3934	False	NA	NA	False	AATAAA	-23	NA	75463884	75439316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_75442388_75463799
Isoform_42593_15	chr2	+	4152	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-9	6	-9	-6	multi-exon	TRUE	canonical	3	29	junction_6	7.31785627135183	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATGTGTTTATTCT	877	False	NA	NA	False	AATAAA	-14	NA	3119409	3228837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
Isoform_42597_15	chr2	+	4458	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	1	2	1	-2	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGAGTGTTTTCTGT	988	False	NA	19	True	AATAAA	-19	NA	3285249	3329912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_42598_15	chr2	+	2561	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-2	1902	-2	259	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGATGTTGTTTTTACC	985	False	NA	NA	False	NA	NA	NA	3285246	3328012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_42599_15	chr2	+	2656	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	1	1804	1	357	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGCCATTGTATAGAC	988	False	NA	NA	False	AATAAA	-7	NA	3285249	3328110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_4260_3	chr10	-	358	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8460	False	NA	NA	False	NA	NA	NA	81977945	81977587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_81977600_81977900
Isoform_42600_34	chr2	+	1820	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-40	2681	-40	-2	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGTAGTTGTTAACA	947	False	NA	8	True	AATAAA	-17	NA	3285208	3327233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
Isoform_42606_3	chr2	+	535	4	FSM	ENSMUSG00000026644.8	ENSMUST00000115089.2	531	4	0	-4	0	4	multi-exon	FALSE	canonical	2	5	junction_2	7.54247233265651	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTGTATGGATATTT	1038	False	NA	NA	False	AATAAA	-20	NA	3337204	3342034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3337259_3341369_3341488_3341591_3341655_3341734
Isoform_42608_3	chr2	+	3730	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	-1	-1260	-1	1260	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTTGAGTATGATGAC	1020	False	NA	9	True	AATAAA	-20	NA	3425185	3456389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
Isoform_42609_103	chr2	+	3119	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	35	2	15	-2	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCATGTTTGTCTCGTTT	979	False	NA	17	True	AATAAA	-23	NA	3714529	3783177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
Isoform_4261_10	chr10	-	211	1	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCGGGTGTGGTGGCGCA	8460	False	NA	NA	False	NA	NA	NA	81977945	81977734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_81977700_81977900
Isoform_42613_4	chr2	+	3845	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	17	493	-2	-493	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCGTTGTGGTTCATTT	4450	False	NA	85	True	AAAAAG	-24	NA	4564583	4616902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_42614_3	chr2	+	5790	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	18	-1453	-1	-4	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACCCCAGTTGCCTCT	4451	False	NA	NA	False	ATTAAA	-15	NA	4564584	4618848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_42616_5	chr2	+	3753	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	43	559	24	-559	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCCTTTCAGTTTTTGT	4476	False	NA	19	True	AGTAAA	-23	NA	4564609	4616836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
Isoform_42618_3	chr2	+	3823	9	FSM	ENSMUSG00000048186.15	ENSMUST00000184139.8	2251	9	4	-1576	1	-3	multi-exon	FALSE	canonical	2	4	junction_5	3.45506874027131	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCACATGAGTCTTGCT	4447	False	NA	1	True	AATAAA	-12	NA	4722645	4806950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343_4801395_4804764
Isoform_42619_102	chr2	+	3014	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	243	2062	243	358	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4335	False	NA	18	True	AATAAA	-27	NA	4886617	4913306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_4262_4	chr10	+	4430	1	Genic_Genomic	ENSMUSG00000073427.5	novel	NA	NA	NA	NA	-5	-20957	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	82190083	82194513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_82190100_82194500
Isoform_42621_52	chr2	+	3299	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-42	2062	-42	358	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4050	False	NA	18	True	AATAAA	-27	NA	4886332	4913306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_42623_6	chr2	+	4040	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	242	1037	242	-1037	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTTCTAGATCTTC	4334	False	NA	4	True	AATAAA	-17	NA	4886616	4914331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_42625_24	chr2	+	1708	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-69	3680	-69	-1260	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCATTGTGTCTACAC	4023	False	NA	17	True	ATTAAA	-17	NA	4886305	4911688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_4263_3	chr10	+	172	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATTTTTTGAGTAA	NA	False	NA	5	True	NA	NA	NA	82444257	82444429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_82444300_82444400
Isoform_42630_15	chr2	+	2885	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	268	358	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTGTTGGACTTGC	4360	False	NA	18	True	AATAAA	-27	NA	4886642	4913306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_42631_15	chr2	+	2249	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	247	-299	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTCTTGTATAATCAG	4339	False	NA	18	True	AATAAA	-15	NA	4886621	4912649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_42637_8	chr2	+	3679	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-390	-356	291	356	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTATACTGTTGGACTT	4383	False	NA	16	True	AATAAA	-25	NA	4886665	4913304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
Isoform_4264_4	chr10	-	521	1	NIC	ENSMUSG00000112375.2	novel	646	4	NA	NA	39	-12716	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-25	NA	82694803	82694282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_82694300_82694800
Isoform_42645_72	chr2	+	1443	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	-7	2	-7	-2	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCATATTAAGTCAATTT	984	False	NA	7	True	AATAAA	-18	NA	4923822	4943539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
Isoform_4265_3	chr10	-	1289	1	Antisense	novelGene_ENSMUSG00000020250.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAACAGAATTGA	NA	False	NA	NA	False	NA	NA	NA	82733546	82732257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_-_82732300_82733500
Isoform_42650_52	chr2	+	2669	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-12	13	-12	-13	multi-exon	FALSE	canonical	3	30	junction_2	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAAGTGAGTG	4715	False	NA	NA	False	AATAAA	-29	NA	5142574	5235676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_5143119_5146041_5146217_5233726
Isoform_42651_9	chr2	+	2734	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-77	13	-77	-13	multi-exon	FALSE	canonical	3	30	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAAGTGAGTG	4650	False	NA	NA	False	AATAAA	-29	NA	5142509	5235676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_5143119_5146041_5146217_5233726
Isoform_42653_3	chr2	+	1467	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	13	-3	intron_retention	FALSE	canonical	3	607	junction_1	58.7319121091762	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAGAAGACTTGGGGG	1949	False	NA	NA	False	NA	NA	NA	5850076	5873544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871043_5871219_5872899
Isoform_42654_14	chr2	+	1363	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGACTTGGGGGTTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
Isoform_42660_4	chr2	+	5169	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	0	5	0	0	multi-exon	TRUE	canonical	3	171	junction_5	24.2975694686972	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1678	False	NA	12	True	AATAAA	-16	NA	5956279	6061509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
Isoform_42661_5	chr2	+	4523	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	64	2897	-41	-1	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTCTGTGTCTT	4718	False	NA	NA	False	NA	NA	NA	6327541	6448304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
Isoform_42663_14	chr2	+	1377	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-10	105	-10	-105	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTATTTTATCTTTG	4815	False	NA	NA	False	AATAAA	-24	NA	10085424	10097512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
Isoform_42666_3	chr2	+	1895	6	FSM	ENSMUSG00000061186.16	ENSMUST00000114864.9	1901	6	9	-3	-3	3	multi-exon	FALSE	canonical	3	38	junction_1	9.3936148526539	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAATAATGCCT	4698	False	NA	NA	False	AATATA	-12	NA	10377255	10443951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757
Isoform_42667_5	chr2	+	2353	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	-738	3	-123	2	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAGTTGGCCTATTCA	4030	False	NA	30	True	AATAAA	-32	NA	11782563	11795133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_42668_11	chr2	+	1599	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	16	3	16	2	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAGTTGGCCTATTCA	4784	False	NA	30	True	AATAAA	-32	NA	11783317	11795133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
Isoform_4267_8	chr10	+	202	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTTTAATGAATTTA	NA	False	NA	NA	False	NA	NA	NA	83187883	83188085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_83187900_83188100
Isoform_42670_3	chr2	+	1836	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	28	-632	0	-2	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTATGTGTTTTCCACTT	4740	False	NA	NA	False	AATAAA	-37	NA	12928879	13006423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
Isoform_42671_32	chr2	+	1847	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	-3	True	NA	7	True	AATAAA	-7	NA	13578768	13587630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_42672_4	chr2	+	2607	8	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	353	7	-17	-6	intron_retention	FALSE	canonical	3	229	junction_1	32.2553586751923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	74	False	NA	7	True	AATAAA	-7	NA	13579115	13587630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423
Isoform_42673_226	chr2	+	1832	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	354	7	-16	-6	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	75	False	NA	7	True	AATAAA	-7	NA	13579116	13587630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_42674_19	chr2	+	2174	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	12	7	12	-6	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGTTTTGGTGTGT	3	True	NA	7	True	AATAAA	-7	NA	13578774	13587630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
Isoform_4268_4	chr10	+	763	2	NNC	ENSMUSG00000020255.9	novel	123179	4	NA	NA	29	-127469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83196113	83196900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_+_83196269_83196292
Isoform_42680_45	chr2	+	2860	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	40	2100	30	-6	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTTATATTCTGATT	4722	False	NA	21	True	ATTAAA	-23	NA	14078948	14152345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_42681_26	chr2	+	2897	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	3	2100	3	-6	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTTATATTCTGATT	4685	False	NA	21	True	ATTAAA	-23	NA	14078911	14152345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_42684_13	chr2	+	3799	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	52	1149	-39	945	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTTAGTTACGTCAC	4734	False	NA	14	True	AATAAA	-14	NA	14078960	14153296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
Isoform_42689_3	chr2	+	3607	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	25	-24	1	24	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATGAAAAACAAAACA	4766	False	NA	NA	False	AAGAAA	-39	NA	15060158	15084001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
Isoform_42690_5	chr2	+	915	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	0	2693	0	-122	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCCATGTACTAATCTC	4741	False	NA	NA	False	CATAAA	-18	NA	15060133	15081284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
Isoform_42691_39	chr2	+	2771	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	28	4148	28	1	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGTTCAAATGTTCTT	127	False	NA	16	True	AATAAA	-29	NA	16361142	16756502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_42692_5	chr2	+	3344	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	69	3534	69	448	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAGCAAAC	168	False	NA	NA	False	NA	NA	NA	16361183	16757116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_42694_3	chr2	+	924	9	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	18	-11	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	82.8232304368768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4660	False	NA	NA	False	NA	NA	NA	18069464	18131029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944
Isoform_42701_4	chr2	+	887	7	NIC	ENSMUSG00000026743.17	novel	825	7	NA	NA	-51	-11	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	69.7577156226384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4591	False	NA	NA	False	NA	NA	NA	18069395	18131029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944
Isoform_42702_5	chr2	+	798	7	NIC	ENSMUSG00000026743.17	novel	825	7	NA	NA	-10	-11	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	69.7577156226384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4680	False	NA	NA	False	NA	NA	NA	18069484	18131029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944
Isoform_42703_3	chr2	+	779	6	NIC	ENSMUSG00000026743.17	novel	825	7	NA	NA	-53	-11	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	85.5523231712617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4589	False	NA	NA	False	NA	NA	NA	18069393	18131029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18127055_18127160_18128529_18128624_18130944
Isoform_42708_3	chr2	+	5064	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-102	-1419	-51	1	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4591	False	NA	13	True	AATAAA	-17	NA	18069395	18217200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_42709_8	chr2	+	913	7	FSM	ENSMUSG00000026743.17	ENSMUST00000154041.8	825	7	-99	11	-51	-11	multi-exon	FALSE	canonical	3	39	junction_3	71.9639184283037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAAAGTAAGTGGA	4591	False	NA	NA	False	NA	NA	NA	18069395	18131029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944
Isoform_42710_3	chr2	+	2090	4	ISM	ENSMUSG00000026743.17	ENSMUST00000114669.2	3865	16	80817	-4	36722	2	3prime_fragment	FALSE	canonical	3	256	junction_2	17.2819751957543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	NA	False	NA	14	True	AATAAA	-18	NA	18211783	18217201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_18211956_18212593_18212691_18213560_18213759_18215578
Isoform_42711_83	chr2	+	923	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	10	2	0	-1	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTTTGGAGTTTGTG	70	False	NA	35	True	AATAAA	-29	NA	18677243	18681040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
Isoform_42712_4	chr2	+	2888	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	205	501	-57	-2	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAATACTATGCTCTT	4860	False	NA	-1	True	AATAAA	-12	NA	18682033	18690939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_42713_3	chr2	+	3384	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	210	0	-52	0	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4865	False	NA	10	True	AATAAA	-15	NA	18682038	18691440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
Isoform_42714_147	chr2	+	1182	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	14	0	14	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4798	False	NA	19	True	AATAAA	-20	NA	19376460	19399787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
Isoform_42715_8	chr2	+	1244	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	14	-62	14	62	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAATAAATAAAAAT	4798	False	NA	81	True	NA	NA	NA	19376460	19399849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
Isoform_42716_6	chr2	+	1016	2	ISM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	21430	0	21225	0	3prime_fragment	FALSE	canonical	3	173	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	8825	False	NA	19	True	AATAAA	-20	NA	19397876	19399787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_19398167_19399061
Isoform_42717_13	chr2	+	3253	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9567	24823	-177	2	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGGGGTTTTGTTGTT	4619	False	NA	28	True	AATATA	-29	NA	20524424	20790512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
Isoform_42718_6	chr2	+	4020	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9544	24079	-200	746	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAGAGAAAAAAAAAAAA	4596	False	NA	NA	False	NA	NA	NA	20524401	20791256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
Isoform_4272_3	chr10	-	180	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACAGTTCTC	4208	False	NA	NA	False	NA	NA	NA	84523503	84523323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_84523300_84523500
Isoform_42720_5	chr2	+	1375	2	FSM	ENSMUSG00000075514.5	ENSMUST00000126967.2	854	2	-169	-352	-169	352	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTATATTTGTGATTT	3440	False	NA	9	True	AATAAA	-20	NA	20973695	20975160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_20974195_20974284
Isoform_42721_27	chr2	+	2610	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	13	1276	-2	454	multi-exon	FALSE	canonical	3	53	junction_1	4.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCTTTATTTT	4797	False	NA	15	True	AATAAA	-24	NA	21210547	21218544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_21210657_21214695_21214853_21216200
Isoform_42722_5	chr2	+	3562	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	11	326	-4	307	multi-exon	FALSE	canonical	3	53	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATCAGCTCTCTGGTT	4795	False	NA	NA	False	ATTAAA	-12	NA	21210545	21219494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_21210657_21214695_21214853_21216200
Isoform_42723_4	chr2	+	1628	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-2	3	intron_retention	FALSE	canonical	3	18	junction_1	98.1149604012836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAAGTGGTTTGTCTT	5679	False	NA	11	True	AATAAA	-13	NA	22785604	22830270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_42724_85	chr2	+	1553	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	79	10	6	1	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAAGTGGTTTGTC	5687	False	NA	9	True	AATAAA	-11	NA	22785612	22830268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_42726_18	chr2	+	1672	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	-38	8	-38	3	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAAGTGGTTTGTCTT	5570	False	NA	11	True	AATAAA	-13	NA	22785495	22830270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
Isoform_42729_6	chr2	+	1429	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-8	1	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAAGTGGTTTGTC	5697	False	NA	9	True	AATAAA	-11	NA	22785622	22830268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
Isoform_4273_6	chr10	+	203	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAATGAATATTTTTC	NA	False	NA	NA	False	AAGAAA	-13	NA	84993603	84993806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_84993600_84993800
Isoform_42730_9	chr2	+	3578	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	7	-1599	7	-6	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22958219	23004516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_42731_4	chr2	+	3662	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	57	-89	53	-6	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22959136	23004516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
Isoform_42737_127	chr2	+	3015	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1543	0	-1543	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGTATAATTACATTG	7222	False	NA	114	True	AGTAAA	-21	NA	23046529	23087729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_42738_128	chr2	+	2937	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1621	0	-1621	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACTATCTCACTGAC	7222	False	NA	36	True	ATTAAA	-28	NA	23046529	23087651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_42743_28	chr2	+	4548	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	150	9	1	-9	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTATCACATTCCAA	7223	False	NA	15	True	AATAAA	-17	NA	23046530	23089263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_42745_31	chr2	+	3850	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	708	0	-708	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGAGTTTAGTTGGTT	7222	False	NA	9	True	AGTAAA	-22	NA	23046529	23088564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
Isoform_42751_4	chr2	+	3499	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	-1	1250	-1	472	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCTCCACTTGCGGAA	NA	False	NA	NA	False	NA	NA	NA	24275342	24297491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
Isoform_42753_40	chr2	+	2814	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-17	1106	-17	-1106	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGTTGTTGTAAAGGGT	NA	False	NA	8	True	GATAAA	-18	NA	24839786	24850981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_42754_7	chr2	+	3925	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-28	6	-28	-6	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTTTAGTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	24839775	24852081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_42755_12	chr2	+	3480	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-17	440	-17	-440	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAAATTGTTGTCTGTT	NA	False	NA	-3	True	NA	NA	NA	24839786	24851647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_42757_368	chr2	+	1257	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-17	2663	-17	146	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGACTGTCGTGTAGTCA	NA	False	NA	33	True	AATAGA	-45	NA	24839786	24849424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
Isoform_4276_278	chr10	+	740	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3101	0	3101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTATGGATTGCTG	NA	False	NA	23	True	TATAAA	-18	NA	12884187	12884927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_12884200_12884900
Isoform_42762_10	chr2	+	1646	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	28.4250659629841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTATGCATCTGTC	NA	False	NA	35	True	ATTAAA	-38	NA	24852433	24862174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42763_46	chr2	+	1605	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	60	1	-6	1	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTATGCATCTGTC	NA	False	NA	35	True	ATTAAA	-38	NA	24852471	24862174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42764_11	chr2	+	1542	8	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	37.5004761874528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATTATGTGTATGCAT	NA	False	NA	30	True	ATTAAA	-33	NA	24852444	24862169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852638_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42765_5	chr2	+	1418	7	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	41.9076365356005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGTGTATGCATCT	NA	False	NA	32	True	ATTAAA	-35	NA	24852436	24862171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852638_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42766_3	chr2	+	1388	7	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.6122700117649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852467	24862175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852638_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42767_10	chr2	+	1826	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	36.416857360294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTATGCATCTG	NA	False	NA	33	True	ATTAAA	-36	NA	24852436	24862172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42768_4	chr2	+	1827	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	33.0924368247489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852433	24862173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
Isoform_42769_4	chr2	+	2898	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	23	1	0	0	multi-exon	TRUE	canonical	1	2	junction_11	1.80136003041693	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	9554	False	NA	1	True	ATTAAA	-17	NA	24944418	24952892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
Isoform_4277_480	chr10	+	696	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3145	0	3145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTATGGATTGCTG	NA	False	NA	23	True	TATAAA	-18	NA	12884231	12884927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_12884200_12884900
Isoform_42770_501	chr2	+	2774	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	13	0	13	0	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152642	25159897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
Isoform_42772_18	chr2	+	2867	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-82	2	-82	-2	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTTTTGCCTTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	25152547	25159895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
Isoform_42773_12	chr2	+	2848	3	NIC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	24	-2	intron_retention	FALSE	canonical	3	142	junction_1	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTTTTGCCTTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	25152653	25159895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25154566_25158843_25159252_25159367
Isoform_42774_441	chr2	+	2710	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	-9	303	-9	-303	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	35	True	ATTAAA	-22	NA	25162480	25175624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_42775_27	chr2	+	2987	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	18	-1	18	1	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGGCATCTGTGG	NA	False	NA	19	True	ATTAAA	-20	NA	25162507	25175928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_42776_7	chr2	+	2939	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	23	-304	intron_retention	FALSE	canonical	3	416	junction_6	46.7767689745934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25162512	25175623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
Isoform_42778_436	chr2	+	3735	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	19	1	-14	-1	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3984	False	NA	32	True	ATTAAA	-20	NA	25222759	25242223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
Isoform_42780_20	chr2	+	4079	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	302	junction_8	32.9823393764572	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3984	False	NA	32	True	ATTAAA	-20	NA	25222759	25242223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
Isoform_42782_83	chr2	+	2384	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	8	729	-1	681	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6665	False	NA	3	True	NA	NA	NA	25262340	25267496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_42784_3	chr2	+	1773	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-11	2	intron_retention	FALSE	canonical	3	90	junction_3	11.0090871556183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTATTTCTCATAATG	6685	False	NA	8	True	AGTAAA	-17	NA	25262360	25266817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266287_25266363
Isoform_42785_5	chr2	+	2287	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6698	False	NA	3	True	AGTAAA	-12	NA	25262373	25266812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_42786_4	chr2	+	1599	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	-1	2	-1	1	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGGCTGTATTTCTCAT	6665	False	NA	4	True	AGTAAA	-13	NA	25262340	25266813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
Isoform_42787_15	chr2	+	1878	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	54	3	12	-3	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAAGTGTCCATAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	25285939	25291330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
Isoform_42788_12	chr2	+	1408	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	74	3	-24	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	3200	False	NA	9	True	ATTAAA	-17	NA	25293156	25299503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
Isoform_42789_7	chr2	+	1483	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	-1	3	-1	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	3125	False	NA	9	True	ATTAAA	-17	NA	25293081	25299503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
Isoform_42790_40	chr2	+	2308	9	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	79.815314163386	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390855	25395483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_42791_312	chr2	+	2298	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	89	1	-20	-1	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390850	25395482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_42792_19	chr2	+	2335	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	53	0	-13	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390814	25395483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_42793_18	chr2	+	2132	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	82.0069683450306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390859	25395483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25390899_25391947_25392164_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_42795_65	chr2	+	3339	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390859	25395483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
Isoform_42798_1209	chr2	+	699	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	25	-2	1	2	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	1209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGGATTTTTCCTCC	NA	False	NA	19	True	NA	NA	NA	25447883	25452096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
Isoform_42802_5	chr2	+	3326	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	57	1	-20	-1	multi-exon	FALSE	canonical	1	3	junction_2	5.66521619677599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTCTGTTGGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	26205583	26238248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
Isoform_42803_6	chr2	+	1936	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	0	-959	0	-3	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGGCTTCTGTTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	26232300	26238246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
Isoform_42806_853	chr2	+	3128	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	9	-2	0	2	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	853	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	653	False	NA	21	True	AATAAA	-18	NA	26279359	26287136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
Isoform_42817_4	chr2	+	1304	8	ISM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	-3	-1	-3	0	intron_retention	FALSE	canonical	3	256	junction_1	48.6524534272404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	169	False	NA	13	True	AATAAA	-13	NA	26476638	26482694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129
Isoform_42818_7	chr2	+	1143	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	154	False	NA	13	True	AATAAA	-13	NA	26476623	26482694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
Isoform_42819_12	chr2	+	1132	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	104.879692982007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	173	False	NA	13	True	AATAAA	-13	NA	26476642	26482694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482262_26482429
Isoform_4282_5	chr5	-	162	1	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	139326917	139326755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_139326800_139326900
Isoform_42820_179	chr2	+	1160	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	4	-1	4	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	176	False	NA	13	True	AATAAA	-13	NA	26476645	26482694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
Isoform_42821_14	chr2	+	1069	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	202	False	NA	13	True	AATAAA	-13	NA	26476671	26482694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
Isoform_42822_4	chr2	+	1258	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	112.21853679317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATGGGGGAATGGGG	221	False	NA	17	True	AATAAA	-17	NA	26476690	26482698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26476833_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
Isoform_42824_45	chr2	+	1563	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	54	5	17	-5	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCGGGTATGTGGAT	2489	False	NA	12	True	AATAAA	-12	NA	26518522	26526504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
Isoform_42825_16	chr2	+	1627	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	-9	4	-9	-4	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCGGGTATGTGGATC	2426	False	NA	13	True	AATAAA	-13	NA	26518459	26526505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
Isoform_42827_3073	chr2	+	860	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	42	12	-11	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	3073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800817	26803318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_42828_507	chr2	+	913	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-11	12	-11	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800764	26803318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_42829_47	chr2	+	967	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-65	12	-65	-12	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800710	26803318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_4283_8	chr10	-	366	1	Genic_Genomic	ENSMUSG00000004356.9	novel	NA	NA	NA	NA	-19	-1451	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACATTA	NA	False	NA	NA	False	GGGGCT	-31	NA	88662685	88662319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_88662300_88662700
Isoform_42834_64	chr2	+	1035	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-12	intron_retention	FALSE	canonical	3	4686	junction_6	264.743114483959	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCTTGACTGCCTTT	NA	False	NA	-6	True	AATATA	-7	NA	26800817	26803318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
Isoform_4284_147	chr10	+	323	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	89714111	89714434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_89714100_89714400
Isoform_42846_8	chr2	+	1171	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	119.474516111177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806416	26810193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808876_26809068_26809203_26809371_26809738
Isoform_42847_11	chr2	+	1310	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	1	-2	combination_of_known_junctions	TRUE	canonical	3	27	junction_5	113.91821627817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806393	26810193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809614
Isoform_42848_94	chr2	+	1184	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	17	2	3	-2	multi-exon	FALSE	canonical	3	245	junction_5	33.4388995034227	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATATGTGTATCATTG	NA	False	NA	35	True	CATAAA	-30	NA	26806395	26810193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
Isoform_4285_5	chr10	-	177	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGTGCA	NA	False	NA	NA	False	NA	NA	NA	90964517	90964340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_90964300_90964500
Isoform_42850_3	chr2	+	1090	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	115.994827470883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTTTTGCCAAACCAA	NA	False	NA	21	True	CATAAA	-45	NA	26806419	26810179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26809738
Isoform_42851_7	chr2	+	2509	5	FSM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	6	4	6	2	multi-exon	FALSE	canonical	3	245	junction_4	33.741665637606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTTGCCAAACCAAT	NA	False	NA	22	True	CATAAA	-17	NA	26806398	26810180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809738
Isoform_42852_3	chr2	+	1535	3	FSM	ENSMUSG00000015488.15	ENSMUST00000114004.8	2194	3	86	573	-1	2	multi-exon	FALSE	canonical	3	82	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTGTTCATCTATTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	26900023	26906863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_26900118_26904104_26904178_26905495
Isoform_42853_6	chr2	+	2606	6	NNC	ENSMUSG00000015488.15	novel	2689	5	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.6641024692693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTCTGCCTGTCACC	NA	False	NA	42	True	AGTAAA	-19	NA	26899961	26911102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899_26909516_26909575
Isoform_42854_927	chr2	+	2841	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	48	1	48	-1	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTCCATATAAGTTT	NA	False	NA	32	True	AATAAA	-18	NA	27405216	27426546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
Isoform_42855_77	chr2	+	2873	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	16	1	16	-1	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTCCATATAAGTTT	NA	False	NA	32	True	AATAAA	-18	NA	27405184	27426546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
Isoform_42864_3	chr2	+	4760	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	145	0	84	0	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTGTGTTGGGGAGT	NA	False	NA	28	True	AATATA	-18	NA	27567357	27652969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_42865_10	chr2	+	2007	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	134	2764	73	10	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCCCTGAGATATCAC	NA	False	NA	4	True	TATAAA	-12	NA	27567346	27650205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_42866_3	chr2	+	1893	9	NIC	ENSMUSG00000015846.16	novel	673	4	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	28.6879765755621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	5018	False	NA	3	True	TATAAA	-11	NA	27630215	27650204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_27630495_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
Isoform_42867_454	chr2	+	2065	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	0	15	0	-2	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTGGTGTCAGACTC	NA	False	NA	13	True	NA	NA	NA	28358077	28361175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
Isoform_42870_8	chr2	+	2685	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	0	-605	0	605	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTGGAAAATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	28358077	28361795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
Isoform_42873_7	chr2	+	3761	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-182	11	19	0	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28403155	28443082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_42874_36	chr2	+	3630	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-50	10	-50	1	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403287	28443083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_42875_4	chr2	+	3772	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403109	28443083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_42876_23	chr2	+	3580	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403299	28443081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
Isoform_42877_3	chr2	+	3084	10	ISM	ENSMUSG00000026812.17	ENSMUST00000153625.8	2388	11	0	1	0	-1	intron_retention	FALSE	canonical	3	21	junction_1	13.8198283028765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAATGG	3465	False	NA	NA	False	NA	NA	NA	28531261	28563764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
Isoform_42878_3	chr2	+	2576	11	ISM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	13	17412	0	2	intron_retention	FALSE	canonical	3	21	junction_1	14.2828568570857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGGGGG	3465	False	NA	NA	False	NA	NA	NA	28531261	28563767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404
Isoform_42879_4	chr2	+	2297	12	ISM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	9	17415	3	-1	5prime_fragment	FALSE	canonical	3	21	junction_1	13.6303016829028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAATGG	3461	False	NA	NA	False	NA	NA	NA	28531257	28563764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796
Isoform_4288_3	chr10	+	174	1	FSM	ENSMUSG00000089214.3	ENSMUST00000158589.3	119	1	101	-156	101	156	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTACAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	92998747	92998921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_92998700_92998900
Isoform_42881_6	chr2	+	3971	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	14	3689	1	-1070	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGGGTCCAATATGCC	3466	False	NA	28	True	NA	NA	NA	28531262	28577490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_42882_3	chr2	+	3971	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1069	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGTCCAATATGCCA	3452	False	NA	29	True	NA	NA	NA	28531248	28577491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_42883_3	chr2	+	2300	12	ISM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	29	17415	18	-1	5prime_fragment	FALSE	canonical	3	29	junction_1	12.3903454817461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAATGG	3487	False	NA	NA	False	NA	NA	NA	28531283	28563764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796
Isoform_42884_3	chr2	+	3693	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	0	-1378	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGGTCTGTCAGTGT	3465	False	NA	NA	False	NA	NA	NA	28531261	28577182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
Isoform_42887_35	chr2	+	2923	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-7	355	-7	-355	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTAGTCCATATGT	NA	False	NA	8	True	GATAAA	-17	NA	28730463	28795228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
Isoform_42888_22	chr2	+	3277	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-8	2	-8	-2	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGGACTCAGCAGAGA	NA	False	NA	16	True	AATAAA	-17	NA	28730462	28795581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
Isoform_42898_4	chr2	+	3922	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	18	True	AATAAA	-20	NA	28950295	28977665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
Isoform_42901_5	chr2	+	3089	10	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	169	36392	169	15630	5prime_fragment	FALSE	canonical	3	142	junction_8	20.4341761653255	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAGATAAAGAGTGAG	NA	False	NA	NA	False	AAAACA	-13	NA	29015172	29036091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614
Isoform_42906_87	chr2	+	1232	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	17	5	3	-5	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGCTCTGTGTTCTGC	NA	False	NA	27	True	AATAAA	-15	NA	29236847	29414800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
Isoform_42908_4	chr2	+	3396	14	ISM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	57	13635	57	-6882	5prime_fragment	FALSE	canonical	3	225	junction_2	52.6120106880459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACTAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29509838	29617355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217
Isoform_42909_6	chr2	+	5763	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	15	624	15	1	multi-exon	TRUE	canonical	3	225	junction_2	42.1435569818812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGCCATGTCTGTGTC	NA	False	NA	8	True	AATAAA	-15	NA	29509796	29630366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_42911_7	chr2	+	5620	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	46	3	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509827	29630368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_42912_3	chr2	+	3124	7	ISM	ENSMUSG00000039844.21	ENSMUST00000147488.2	4223	16	31627	-1	1548	1	3prime_fragment	FALSE	canonical	3	341	junction_6	16.0355507822117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	2672	False	NA	18	True	AATAAA	-25	NA	29624120	29630376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
Isoform_42913_4	chr2	+	3483	4	ISM	ENSMUSG00000026798.11	ENSMUST00000148791.2	613	6	0	2379	0	-2379	5prime_fragment	FALSE	canonical	3	105	junction_3	21.2759645296439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29678282	29683635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468
Isoform_42915_170	chr2	+	1236	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	20	735	8	22	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	49	True	AATAAA	-39	NA	29678290	29687020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
Isoform_42917_4	chr2	+	1724	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-486	753	280	4	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTTGTCCTAGACTT	NA	False	NA	31	True	AATAAA	-21	NA	29677784	29687002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
Isoform_42918_6	chr2	+	1260	7	NIC	ENSMUSG00000026798.11	novel	1991	7	NA	NA	-7	22	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	46.5608920304011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	49	True	AATAAA	-39	NA	29678263	29687020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685395_29685523_29685947_29686042_29686419
Isoform_42919_236	chr2	+	2934	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	54	1066	54	-1066	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGCCTGGCTCCTT	NA	False	NA	29	True	AATAAA	-21	NA	29692699	29706468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_4292_26	chr10	+	2949	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93621516	93624465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_93621500_93624500
Isoform_42920_150	chr2	+	2957	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	31	1066	31	-1066	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACAGCCTGGCTCCTT	NA	False	NA	29	True	AATAAA	-21	NA	29692676	29706468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_42924_5	chr2	+	3974	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	41	39	41	-39	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTTGAAGCAGGTCT	NA	False	NA	NA	False	NA	NA	NA	29692686	29707495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
Isoform_42928_7	chr2	+	1285	6	FSM	ENSMUSG00000069020.10	ENSMUST00000147325.2	681	6	36	-640	2	-3	multi-exon	FALSE	canonical	3	23	junction_3	146.238708965855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTTGTTTACTAGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	29717408	29734073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732473_29732559_29732732_29732782_29733114
Isoform_42929_21	chr2	+	2158	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	32	6	13	-6	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATTTTTGTTGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	29717385	29735008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
Isoform_42930_157	chr2	+	1205	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	51	940	-2	-2	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717404	29734074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
Isoform_42932_3	chr2	+	1311	5	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.749779541275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717385	29734074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733027
Isoform_42933_6	chr2	+	1306	6	NNC	ENSMUSG00000069020.10	novel	681	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	146.967207226646	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717385	29734074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732476_29732559_29732732_29732782_29733114
Isoform_42934_5	chr2	+	1129	4	FSM	ENSMUSG00000069020.10	ENSMUST00000156944.8	497	4	55	-687	2	-3	multi-exon	FALSE	canonical	1	2	junction_1	149.455307329278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTTGTTTACTAGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	29717408	29734073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29717448_29731413_29731496_29732732_29732782_29733114
Isoform_42938_5	chr2	+	2671	12	NIC	ENSMUSG00000039787.14	novel	599	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.67547627297666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759169	29772852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29759358_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
Isoform_42939_42	chr2	+	2690	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	25	0	-25	0	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759530	29772852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
Isoform_4294_93	chr16	-	2905	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43591544	43588639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_43588600_43591500
Isoform_42943_20	chr2	+	3747	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	275.689789437331	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42954_35	chr2	+	3756	21	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	300.030898408814	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7220	False	NA	14	True	AATAAA	-14	NA	29779823	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42955_152	chr2	+	2252	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7220	False	NA	11	True	AATAAA	-15	NA	29779823	29812549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_42956_254	chr2	+	3753	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7220	False	NA	14	True	AATAAA	-14	NA	29779823	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_4296_3	chr10	-	602	1	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	30719	5	4906	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTTGGAGTGAAAGA	NA	False	NA	-19	True	AATAAA	-18	NA	93694957	93694355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_93694400_93695000
Isoform_42963_25	chr2	+	3801	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113759.9	3807	21	7	-1	-1	0	multi-exon	FALSE	non_canonical	0	0	junction_8	298.874656001475	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42965_119	chr2	+	2303	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	0	2	0	1	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7226	False	NA	11	True	AATAAA	-15	NA	29779829	29812549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_42966_266	chr2	+	3813	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	12	1	-4	-1	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7215	False	NA	12	True	AATAAA	-12	NA	29779818	29821756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42971_19	chr2	+	3704	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	29	-651	-1	0	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42973_22	chr2	+	3811	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	282.415381132119	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7181	False	NA	13	True	AATAAA	-13	NA	29779784	29821757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42976_31	chr2	+	2098	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7220	False	NA	11	True	AATAAA	-15	NA	29779823	29812549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_42977_82	chr2	+	3599	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7220	False	NA	14	True	AATAAA	-14	NA	29779823	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42979_26	chr2	+	2171	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	76	2	1	1	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCGTGTTGCACAAA	7204	False	NA	11	True	AATAAA	-15	NA	29779807	29812549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
Isoform_42980_86	chr2	+	3656	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7220	False	NA	14	True	AATAAA	-14	NA	29779823	29821758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
Isoform_42989_14	chr2	+	817	3	FSM	ENSMUSG00000019715.15	ENSMUST00000154490.8	860	3	28	15	28	-15	multi-exon	FALSE	canonical	3	530	junction_2	57.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-26	NA	29825467	29828952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29825611_29826021_29826250_29828506
Isoform_4299_3	chr10	+	2494	1	Genic_Genomic	ENSMUSG00000005897.15	novel	NA	NA	NA	NA	-80	-44915	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	93983804	93986298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_93983800_93986300
Isoform_42992_204	chr2	+	3050	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	30	950	28	-950	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTGATATGTGGTTAC	NA	False	NA	9	True	AATAAA	-19	NA	29825467	29849433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
Isoform_4300_19	chr10	+	261	1	ISM	ENSMUSG00000020022.18	ENSMUST00000135292.3	1386	5	21969	474	21652	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94056550	94056811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_94056600_94056800
Isoform_43000_5	chr2	+	3116	21	ISM	ENSMUSG00000057738.15	ENSMUST00000100225.9	7892	57	-42	32226	-39	5182	5prime_fragment	FALSE	canonical	3	215	junction_7	24.1163844719726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGGATATCCTCACC	NA	False	NA	NA	False	NA	NA	NA	29855649	29889231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137
Isoform_43001_3	chr2	+	3831	29	ISM	ENSMUSG00000057738.15	ENSMUST00000100225.9	7892	57	-3	23860	0	-517	5prime_fragment	FALSE	canonical	3	62	junction_22	65.6926983175824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGTACCAAGCATTAG	NA	False	NA	NA	False	NA	NA	NA	29855688	29897597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505
Isoform_43002_3	chr2	+	3711	25	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	45031	2	6626	1	3prime_fragment	TRUE	canonical	3	336	junction_1	63.1538575403136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTGCTCCTCTTTAT	7662	False	NA	19	True	AATAAA	-19	NA	29900725	29921461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_43003_3	chr2	+	3178	21	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	47992	2	-8146	1	3prime_fragment	FALSE	canonical	3	347	junction_4	59.5503148606286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTGCTCCTCTTTAT	104	False	NA	19	True	AATAAA	-19	NA	29903686	29921461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_43004_4	chr2	+	3013	20	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	49907	2	-6231	1	3prime_fragment	FALSE	canonical	3	347	junction_3	59.5741117621049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTGCTCCTCTTTAT	2019	False	NA	19	True	AATAAA	-19	NA	29905601	29921461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
Isoform_4301_3	chr10	+	793	1	NIC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3101	-4428	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95193850	95194643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_95193800_95194600
Isoform_43012_1481	chr2	+	2570	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	8	246	-8	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952110	29962581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_43018_304	chr2	+	1170	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	209	1445	209	14	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATCTCCGTTTCTGTT	NA	False	NA	2	True	AATACA	-7	NA	29952073	29961144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_4302_7	chr10	-	3303	1	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	54	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAAATTGCTTTAC	NA	False	NA	NA	False	AAGAAA	-21	NA	95252665	95249362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95249400_95252700
Isoform_4303_3	chr10	+	2131	1	Genic_Genomic	ENSMUSG00000097766.2	novel	NA	NA	NA	NA	-1638	-10773	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAGAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	95251598	95253729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_95251600_95253700
Isoform_43039_617	chr2	+	2841	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-11	4	-11	-4	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29956456	29962585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
Isoform_4304_4	chr10	-	2739	1	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	24	-13146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1577	False	NA	NA	False	NA	NA	NA	95297062	95294323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_95294300_95297100
Isoform_4307_5	chr10	+	2635	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	-22	2476	-22	-2476	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAAAGGCCTGGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	98943998	98946633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_98944000_98946600
Isoform_43075_3	chr9	+	510	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	548	-283	548	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81560212	81560722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_81560200_81560700
Isoform_43082_100	chr2	+	2982	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	19.7860437769826	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1362	False	NA	25	True	AATAAA	-27	NA	29967739	29981035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_43083_64	chr2	+	3030	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	77	junction_7	19.7860437769826	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1313	False	NA	24	True	AATAAA	-26	NA	29967690	29981034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_43084_4	chr2	+	3525	21	FSM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	-62	-3	-3	3	multi-exon	FALSE	canonical	3	77	junction_6	20.1955440629858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCAGGGGTTGTGTAGT	1315	False	NA	18	True	AATAAA	-20	NA	29967692	29981028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_43085_3	chr2	+	3560	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	77	junction_6	20.0504902848988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGGTTGTGTAGTGT	1362	False	NA	20	True	AATAAA	-22	NA	29967739	29981030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
Isoform_43086_4	chr2	+	3673	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.24933858267454	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGTCGGTGCTGTGCTG	2759	False	NA	17	True	AATAAA	-16	NA	30023819	30042022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027194_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
Isoform_43087_44	chr2	+	3511	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	7	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	5.73488351136175	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGTGTCGGTGCTGTG	2749	False	NA	14	True	AATAAA	-13	NA	30023809	30042019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040358_30040383
Isoform_43088_3	chr2	+	3448	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	37	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	5.73488351136175	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCGGTGCTGTGC	2809	False	NA	15	True	AATAAA	-14	NA	30023869	30042020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040355_30040384
Isoform_43089_322	chr2	+	1016	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	20	27	20	-27	multi-exon	FALSE	canonical	3	314	junction_1	35	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTTGACCATCTCTAC	NA	False	NA	7	True	ATTAAA	-19	NA	30061524	30064054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30062079_30062853_30062964_30063702
Isoform_4309_3	chr10	-	505	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCAGAAAAAAAAAAGGAGA	NA	False	NA	NA	False	AATACA	-2	NA	99051279	99050774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_99050800_99051300
Isoform_43091_26	chr2	+	4284	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	17	0	17	0	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127750	30153802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
Isoform_43093_21	chr2	+	1300	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	90	7	-8	1	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATTTTATATGTACG	10007	False	NA	NA	False	AATAAA	-10	NA	30156822	30172153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
Isoform_43094_8	chr2	+	532	7	FSM	ENSMUSG00000052533.15	ENSMUST00000113634.3	534	7	1	1	1	-1	multi-exon	FALSE	canonical	3	62	junction_6	456.698539033743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTTGTTTCTTGTGTA	4879	False	NA	NA	False	NA	NA	NA	30176439	30193820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671
Isoform_43096_110	chr2	+	5687	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	20	3	0	-3	multi-exon	FALSE	canonical	3	896	junction_14	107.189702087653	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4868	False	NA	15	True	ATTAAA	-16	NA	30176428	30234275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
Isoform_43097_64	chr2	+	5687	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-3	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_32	205.090806834763	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4865	False	NA	14	True	ATTAAA	-15	NA	30176425	30234274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226945_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
Isoform_43106_6	chr2	+	2439	14	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	49801	4	-6742	-4	3prime_fragment	FALSE	canonical	3	1066	junction_9	82.8849634117269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30226209	30234274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
Isoform_4311_18	chr10	+	879	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	1	-9	1	9	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	106018882	106019761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_106018900_106019800
Isoform_43112_31	chr2	+	3369	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	10	2	-2	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254254	30275531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
Isoform_43113_3	chr2	+	3252	15	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	15.3609629800175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254254	30275531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273940
Isoform_43116_1115	chr2	+	2072	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	177	2	1	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_43117_42	chr2	+	2224	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	25	2	25	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282290	30290539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_43119_14	chr2	+	2409	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_4	23.4354906546081	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	False	NA	9	True	AATAAA	-16	NA	30282427	30290541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287570_30289153
Isoform_4312_7	chr10	+	5182	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	1	-4312	1	4312	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCGCTTCTTGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	106018882	106024064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_106018900_106024100
Isoform_43120_14	chr2	+	1943	7	FSM	ENSMUSG00000026856.15	ENSMUST00000113612.10	1958	7	15	0	1	0	multi-exon	FALSE	canonical	3	5	junction_5	126.441027096957	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287479_30287570_30289153
Isoform_43123_32	chr2	+	2249	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	287	junction_5	28.1706111636459	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGAGCATACATTA	NA	False	NA	5	True	AATAAA	-12	NA	30282442	30290537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_43129_41	chr2	+	2274	9	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	141.368700124886	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282442	30290539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30282525_30283663_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
Isoform_4313_10	chr10	+	2630	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	1	-1760	1	1760	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	106018882	106021512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_106018900_106021500
Isoform_43133_2566	chr2	+	2567	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	19	0	19	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	2566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306069	30337817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
Isoform_43147_48	chr2	+	1181	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	27	-16	11	0	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697979	30713045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
Isoform_43148_7	chr2	+	1101	3	ISM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	118	1828	2	564	5prime_fragment	FALSE	canonical	3	480	junction_2	39	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTGTCATGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	30697955	30711217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_30698096_30709640_30709845_30710460
Isoform_43149_413	chr2	+	1237	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	142	8	11	8	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCAGTCTGTGTGTGG	NA	False	NA	19	True	AATAAA	-25	NA	30697979	30713037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
Isoform_4315_3	chr10	+	936	1	Genic_Genomic	ENSMUSG00000019907.11	novel	NA	NA	NA	NA	-101	-90334	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCACTAACA	NA	False	NA	NA	False	NA	NA	NA	107997952	107998888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_107998000_107998900
Isoform_43150_24	chr2	+	1289	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	94	4	-21	-4	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCTGTGTGTGGATGT	NA	False	NA	23	True	AATAAA	-29	NA	30697931	30713041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
Isoform_43152_16	chr2	+	1222	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	217	2	-168	-2	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACGAGGCTTCAGAAGGG	NA	False	NA	NA	False	AATAAA	-17	NA	30735287	30771261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
Isoform_43154_16	chr2	+	1203	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	236	2	-149	-2	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACGAGGCTTCAGAAGGG	NA	False	NA	NA	False	AATAAA	-17	NA	30735306	30771261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
Isoform_43155_3	chr2	+	2986	5	NIC	ENSMUSG00000026848.15	novel	2809	5	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5918570377542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTTCCTGAGCTTTTC	NA	False	NA	9	True	AATAAA	-14	NA	30843029	30849023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_30843236_30843763_30844030_30845779_30845966_30846459_30846588_30846823
Isoform_43157_58	chr2	+	3014	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	22	3	2	0	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30842992	30849024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
Isoform_43159_66	chr2	+	2987	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	51	1	19	-1	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30843021	30849026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
Isoform_4316_5	chr4	-	362	2	Genic_Genomic	ENSMUSG00000028879.5	novel	2934	9	NA	NA	-279	-26323	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTTTTTTTTTT	5814	False	NA	NA	False	TTTAAA	-29	NA	132612099	132610679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_132610687_132611744
Isoform_43164_3	chr2	+	4722	5	NNC	ENSMUSG00000026848.15	novel	2809	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_2	43.5918570377542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30842997	30849026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30843236_30843763_30845478_30845526_30845966_30846459_30846588_30846823
Isoform_43167_5	chr2	+	3515	4	FSM	ENSMUSG00000026848.15	ENSMUST00000155213.8	1324	4	-162	-2029	19	-1	multi-exon	FALSE	canonical	1	21	junction_1	37.4788829431544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGAGCTTTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	30843021	30849026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30844030_30845789_30845966_30846459_30846588_30846823
Isoform_43168_3	chr2	+	981	4	ISM	ENSMUSG00000026854.17	ENSMUST00000061544.11	1360	10	6	6781	6	733	5prime_fragment	FALSE	canonical	3	19	junction_1	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30872380	30890823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068
Isoform_43169_6	chr2	+	4054	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	90	944	6	-940	multi-exon	FALSE	canonical	1	7	junction_21	9.09889721645187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTGTACTGTGACACT	NA	False	NA	21	True	AATAAA	-21	NA	30872380	30912654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
Isoform_4317_3	chr10	-	267	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTAGTTGAGATTCAG	NA	False	NA	NA	False	NA	NA	NA	108142621	108142354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_108142400_108142600
Isoform_43170_6	chr2	+	4089	25	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-3	-942	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	10.8943792847505	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	NA	False	NA	19	True	AATAAA	-19	NA	30872342	30912652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896396_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
Isoform_43171_10	chr2	+	1553	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	18	26660	1	2	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTTTTTTTTTTT	NA	False	NA	NA	False	ACTAAA	-18	NA	31042345	31082127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
Isoform_43173_4	chr2	+	2105	16	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	28	8972	-7	-259	5prime_fragment	FALSE	canonical	1	139	junction_14	92.4117356664666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31042355	31099815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078
Isoform_43174_90	chr2	+	3899	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	3	2232	3	1977	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAGAGCAAGTGTTCAA	NA	False	NA	13	True	AATAAA	-26	NA	31042330	31106555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_43175_180	chr2	+	1941	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	28	4165	-7	44	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGCCTGGGTCTGTG	NA	False	NA	19	True	AGTAAA	-27	NA	31042355	31104622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_43178_4	chr2	+	5783	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	36	315	1	-315	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCTTGTGTCTGTGGT	NA	False	NA	14	True	AATAAA	-10	NA	31042363	31108472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_43179_6	chr2	+	2102	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-145	4177	-145	32	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGCTAATTGGGAG	NA	False	NA	7	True	AGTAAA	-15	NA	31042182	31104610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
Isoform_43180_5	chr2	+	2349	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	7	-1633	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	125.749539742944	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	31042334	31080492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079438
Isoform_43183_5	chr2	+	2459	13	FSM	ENSMUSG00000055632.19	ENSMUST00000142448.8	2495	13	35	1	35	-1	multi-exon	FALSE	canonical	1	1	junction_3	9.34931667140557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGATGTCTTTGCTGAG	NA	False	NA	NA	False	TATAAA	-18	NA	31336781	31350748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31336888_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
Isoform_43184_3	chr2	+	1702	7	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-192	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	8.51795489278709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTGCTGAGTTATT	NA	False	NA	NA	False	TATAAA	-23	NA	31344527	31350753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31349092_31349220_31350061
Isoform_43185_16	chr2	+	2739	6	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-208	-2	intron_retention	FALSE	canonical	2	13	junction_2	4.8	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGATGTCTTTGCTGA	NA	False	NA	NA	False	TATAAA	-17	NA	31344511	31350747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
Isoform_43187_4	chr2	+	1242	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-191	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.54921462739214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTGATGTCTTTGC	NA	False	NA	NA	False	TATAAA	-14	NA	31344528	31350744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31349092_31349220_31350061
Isoform_43188_4	chr2	+	998	3	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-208	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTGATGTCTTTGCT	NA	False	NA	NA	False	TATAAA	-15	NA	31344511	31350745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31344703_31344816_31344940_31350061
Isoform_43190_4110	chr2	+	1599	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	95	2	95	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	4110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360313	31410682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
Isoform_43192_109	chr2	+	1695	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	-1	2	-1	-2	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360217	31410682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
Isoform_43196_55	chr2	+	1467	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-2	combination_of_known_splicesites	FALSE	canonical	3	195	junction_12	721.33651817233	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31360313	31410682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31404690_31404848_31408737_31408804_31410383
Isoform_4320_6	chr15	+	182	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28035185	28035367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_28035200_28035400
Isoform_43208_3	chr2	+	1886	2	FSM	ENSMUSG00000026843.16	ENSMUST00000137504.3	1909	2	8	15	8	-15	multi-exon	FALSE	canonical	3	702	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACACAAAATACATTAAAAA	642	False	NA	NA	False	NA	NA	NA	31462811	31474898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31462966_31473166
Isoform_43209_9	chr2	+	3808	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-159	-1	7	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	500	False	NA	30	True	AATAAA	-31	NA	31462669	31507532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
Isoform_4321_9	chr10	-	656	1	NIC	ENSMUSG00000035798.15	novel	4548	17	NA	NA	-6	-35229	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	110845870	110845214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_110845200_110845900
Isoform_43210_23	chr2	+	3656	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-7	-1	-4	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	652	False	NA	30	True	AATAAA	-31	NA	31462821	31507532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
Isoform_43212_81	chr2	+	3113	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	149	6	8	0	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	642	False	NA	30	True	AATAAA	-31	NA	31462811	31507532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_43213_11	chr2	+	3243	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	22	3	22	3	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGTTTTGTTTGCTG	515	False	NA	33	True	AATAAA	-34	NA	31462684	31507535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_43216_27	chr2	+	3156	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	1	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	661	False	NA	31	True	AATAAA	-32	NA	31462830	31507533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
Isoform_43218_8	chr2	+	3322	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	4	3	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGTTTTGTTTGCTG	497	False	NA	33	True	AATAAA	-34	NA	31462666	31507535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
Isoform_43219_6	chr2	+	3024	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_16	158.982817726256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	659	False	NA	30	True	AATAAA	-31	NA	31462828	31507532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
Isoform_4322_10	chr10	-	230	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-15	NA	111072030	111071800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_111071800_111072000
Isoform_43220_3	chr2	+	3236	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	24	1	intron_retention	FALSE	canonical	3	64	junction_2	150.483295492298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	517	False	NA	31	True	AATAAA	-32	NA	31462686	31507533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_43221_9	chr2	+	3122	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	64	junction_2	150.483295492298	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	636	False	NA	36	True	AATAAA	-37	NA	31462805	31507538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
Isoform_43222_330	chr2	+	1630	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	13	43	-6	-43	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	31560739	31571318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
Isoform_43229_13	chr2	+	5101	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	4	689	4	-3	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	NA	False	NA	17	True	AATAAA	-18	NA	31649958	31693550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
Isoform_43231_13	chr2	+	1341	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	173	1603	-22	501	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTCCATGTGTGCT	NA	False	NA	14	True	NA	NA	NA	31840323	31861851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_43232_5	chr2	+	1430	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	82	1605	-53	499	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGTCTCCATGTGTG	NA	False	NA	12	True	NA	NA	NA	31840232	31861849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_43233_4	chr2	+	3003	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	114	0	-21	0	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTGTGTTTCTT	NA	False	NA	4	True	AATAAA	-14	NA	31840264	31863454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
Isoform_43235_34	chr2	+	931	7	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	28	69145	-22	3270	5prime_fragment	FALSE	canonical	3	103	junction_4	13.4039795085887	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATGTGAAAGATTAT	NA	False	NA	9	True	NA	NA	NA	31864475	31873238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134
Isoform_43236_20	chr2	+	961	7	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	-2	69145	-2	3270	5prime_fragment	FALSE	canonical	3	103	junction_4	13.4039795085887	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATGTGAAAGATTAT	NA	False	NA	9	True	NA	NA	NA	31864445	31873238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134
Isoform_43237_7	chr2	+	2639	15	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	34.0507574311153	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	31864455	31888711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31888214
Isoform_43238_4	chr2	+	4718	27	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	29	20638	-21	11	intron_retention	FALSE	canonical	3	95	junction_11	15.0262098430882	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAACTTGTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	31864476	31921745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718
Isoform_43239_3	chr2	+	6565	36	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-11	1	intron_retention	TRUE	non_canonical	0	0	junction_7	30.6753906549979	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCTGGGTATTTATTT	NA	False	NA	29	True	ATTAAA	-23	NA	31864486	31942380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878166_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
Isoform_4324_134	chr10	-	2305	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-11	1272	-5	1087	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAACAAAAAAAAAAAAA	NA	False	NA	79	True	NA	NA	NA	112764911	112762606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_112762600_112764900
Isoform_43240_11	chr2	+	1912	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	24	11	-13	1	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCATCCTTGTCCTG	NA	False	NA	NA	False	AATACA	-11	NA	31985563	32000821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_31986275_31999620
Isoform_43242_6	chr2	+	2315	9	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	-2	38609	-2	-23228	5prime_fragment	FALSE	canonical	3	374	junction_1	33.800656428537	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	6648	False	NA	NA	False	NA	NA	NA	32041091	32085940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868
Isoform_43243_4	chr2	+	6856	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-5	1617	combination_of_known_junctions	TRUE	canonical	3	283	junction_29	60.7166476024171	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	6645	False	NA	11	True	AATAAA	-13	NA	32041088	32122791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
Isoform_43245_8	chr2	+	2778	8	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	31	-23228	intron_retention	FALSE	canonical	3	374	junction_1	35.6479383724232	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	6681	False	NA	NA	False	NA	NA	NA	32041124	32085940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32041304_32072469_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868
Isoform_43247_3	chr2	+	2702	5	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	40812	-1688	4270	-1672	3prime_fragment	FALSE	canonical	3	239	junction_3	129.855689132206	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATAATGTCTGAATTA	NA	False	NA	10	True	AGTAAA	-16	NA	32114049	32122862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
Isoform_43248_176	chr2	+	2835	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	82	1	0	-1	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126683	32145016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_43249_19	chr2	+	2915	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	2	1	2	-1	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126603	32145016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_43251_16	chr2	+	2772	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126653	32145016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
Isoform_43253_29	chr2	+	4318	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	36	7	-24	1	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCTAGGGTGTTCG	NA	False	NA	23	True	AATAAA	-16	NA	32178300	32197926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_43254_9	chr2	+	4375	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	-22	8	-22	0	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178242	32197925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_43255_4	chr2	+	4295	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178241	32197925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
Isoform_43256_4	chr2	+	2726	16	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	47	junction_3	15.4050496771531	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253042	32268309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
Isoform_43259_5	chr2	+	2190	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	-247	3035	-247	1161	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTGGTCTGACAATGGT	6845	False	NA	17	True	AATAAA	-17	NA	32285660	32292749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_4326_4	chr10	-	783	1	FSM	ENSMUSG00000020137.6	ENSMUST00000218989.2	527	1	-340	84	-340	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	2020	False	NA	NA	False	NA	NA	NA	115220688	115219905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115219900_115220700
Isoform_43260_231	chr2	+	1574	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	370	3034	-174	1162	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTCTGACAATGGTG	7462	False	NA	18	True	AATAAA	-18	NA	32286277	32292750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_43261_81	chr2	+	1609	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	335	3034	-209	1162	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTCTGACAATGGTG	7427	False	NA	18	True	AATAAA	-18	NA	32286242	32292750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
Isoform_43262_52	chr2	+	2830	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1822	-2	1822	2	multi-exon	FALSE	canonical	3	24	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACACACTCCTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	32342290	32346967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32342962_32344808
Isoform_43263_14	chr2	+	2910	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1742	-2	1742	2	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACACACTCCTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	32342210	32346967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32342962_32344808
Isoform_43265_5	chr2	+	3840	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.533013400531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1547	False	NA	18	True	ATTAAA	-18	NA	32425308	32459763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32425642_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
Isoform_43266_129	chr2	+	4292	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	-74	5	-47	1	multi-exon	FALSE	canonical	3	103	junction_7	13.8115893364956	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1535	False	NA	18	True	ATTAAA	-18	NA	32425296	32459763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
Isoform_4327_14	chr10	+	2268	1	Genic_Genomic	ENSMUSG00000034163.11	novel	NA	NA	NA	NA	-26	-43674	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATAGA	-9	NA	115220837	115223105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_115220800_115223100
Isoform_43270_125	chr2	+	841	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	20	8	11	-8	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4793	False	NA	15	True	AATAAA	-16	NA	32460889	32463583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
Isoform_43271_20	chr2	+	1107	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	39	-491	39	-7	multi-exon	FALSE	canonical	3	393	junction_2	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCTCTGCCATCCT	4821	False	NA	16	True	AATAAA	-17	NA	32460917	32463584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32461308_32462308_32462412_32462970
Isoform_43273_19	chr2	+	3640	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-17	3	-17	-3	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTCAACCACTTCCT	NA	False	NA	13	True	AATAAA	-15	NA	32477089	32489707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
Isoform_43274_23	chr2	+	1647	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-17	1996	-17	1	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTCTCTGTGGTAAC	NA	False	NA	8	True	NA	NA	NA	32477089	32487714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
Isoform_43276_56	chr2	+	2393	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	0	1	0	1	multi-exon	FALSE	canonical	3	38	junction_2	28.6225435627234	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3369	False	NA	6	True	AATAAA	-15	NA	32497037	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_43277_12	chr2	+	2430	7	NNC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	34.6910971608311	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3328	False	NA	6	True	AATAAA	-15	NA	32496996	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_43278_5	chr2	+	2362	6	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	41.0482642751189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3309	False	NA	6	True	AATAAA	-15	NA	32496977	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32497124_32498053_32498109_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_4328_6	chr10	-	2584	1	FSM	ENSMUSG00000074734.4	ENSMUST00000099261.3	2254	1	-338	8	-338	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTACTCTGTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	115950160	115947576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_115947600_115950200
Isoform_43280_4	chr2	+	2536	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095045.9	2536	7	1	-1	1	1	multi-exon	FALSE	canonical	2	6	junction_2	37.4718412796714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3355	False	NA	6	True	AATAAA	-15	NA	32497023	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32497124_32498053_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_43281_37	chr2	+	2355	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	48	-1	-2	1	multi-exon	FALSE	canonical	3	16	junction_1	35.6202189774291	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3352	False	NA	6	True	AATAAA	-15	NA	32497020	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_43283_4	chr2	+	2374	6	NNC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	41.6768520884195	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3329	False	NA	6	True	AATAAA	-15	NA	32496997	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_43284_7	chr2	+	2265	5	NIC	ENSMUSG00000026811.19	novel	2361	7	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	33.6191909480285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3332	False	NA	6	True	AATAAA	-15	NA	32497000	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32497124_32502235_32502416_32504792_32505181_32508508_32508617_32509351
Isoform_43285_85	chr2	+	2308	5	NIC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3308	False	NA	6	True	AATAAA	-15	NA	32496976	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_43286_23	chr2	+	2257	5	NNC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	39.7264080933577	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	3355	False	NA	6	True	AATAAA	-15	NA	32497023	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509355
Isoform_43287_3	chr2	+	2502	5	ISM	ENSMUSG00000026811.19	ENSMUST00000081879.12	2345	6	512	-1	-37	1	3prime_fragment	FALSE	canonical	3	74	junction_1	16.299923312703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTTCTGTGTCTTT	5319	False	NA	6	True	AATAAA	-15	NA	32498987	32510817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
Isoform_43289_33	chr2	+	2016	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	50	-3	49	-1	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32515498	32525069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43290_169	chr2	+	1946	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3032	-3	79	-1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32518480	32525069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43291_29	chr2	+	2000	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2978	-3	25	-1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32518426	32525069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43292_15	chr2	+	2163	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2813	-1	-140	1	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTGAGTGTATTGAA	NA	False	NA	14	True	AATAAA	-18	NA	32518261	32525067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43295_116	chr2	+	2039	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-4	-1	-4	1	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGAAGTGAGTGTATTG	NA	False	NA	12	True	AATAAA	-16	NA	32519511	32525065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43297_28	chr2	+	1996	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	275	-5	258	-1	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32519790	32525069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43298_9	chr2	+	2272	5	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	4066	-3	-1	-1	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32519514	32525069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
Isoform_43301_131	chr2	+	2814	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	66	542	39	-2	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGCCCCTCTGGGTT	621	False	NA	23	True	AATAAA	-11	NA	32536672	32572128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_43302_100	chr2	+	2928	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-48	542	-48	-2	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGCCCCTCTGGGTT	507	False	NA	23	True	AATAAA	-11	NA	32536558	32572128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_43305_6	chr2	+	3371	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	54	-3	27	3	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCAATTAGTTCCAG	609	False	NA	NA	False	AATAAA	-16	NA	32536660	32572673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_43306_60	chr2	+	2829	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	27	547	27	4	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	609	False	NA	29	True	AATAAA	-17	NA	32536660	32572134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_43307_21	chr2	+	2925	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-75	553	-48	-2	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGCCCCTCTGGGTT	507	False	NA	23	True	AATAAA	-11	NA	32536558	32572128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
Isoform_43308_26	chr2	+	2624	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	-35	518	-35	0	multi-exon	FALSE	canonical	1	2	junction_6	3.98622628559895	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCCCATGAGGCCT	1510	False	NA	NA	False	AATAAA	-15	NA	32617682	32645006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
Isoform_4331_3	chr10	+	197	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTAGTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	117436414	117436611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_117436400_117436600
Isoform_43310_4	chr2	+	2279	5	NIC	ENSMUSG00000009563.17	novel	1536	5	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	105.338442650345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAGTTTCTTACTGT	632	False	NA	12	True	AATAAA	-23	NA	32647288	32652259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32647463_32647899_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_43311_258	chr2	+	1492	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	43	1	1	-1	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGACCAAAGTTTCTTA	632	False	NA	8	True	AATAAA	-19	NA	32647288	32652255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_43312_3	chr2	+	2401	4	NIC	ENSMUSG00000009563.17	novel	1536	5	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	200	junction_1	23.7533623350932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATTGACCAAAGTTTC	606	False	NA	5	True	AATAAA	-16	NA	32647262	32652252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_32647463_32648682_32648949_32649538_32650729_32651507
Isoform_43313_19	chr2	+	1406	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	22	-513	1	-1	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGACCAAAGTTTCTTA	632	False	NA	8	True	AATAAA	-19	NA	32647288	32652255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_43314_3	chr2	+	2731	4	FSM	ENSMUSG00000009563.17	ENSMUST00000149720.3	2712	4	-21	2	0	-2	multi-exon	FALSE	canonical	3	233	junction_3	10.6562449087639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATTGACCAAAGTTTC	610	False	NA	5	True	AATAAA	-16	NA	32647266	32652252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32648949_32649538_32649715_32650600_32650729_32651507
Isoform_43315_9	chr2	+	961	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-11	2	-11	-2	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAAGCTTCCTGTGGG	8180	False	NA	4	True	ATTAAA	-14	NA	32665786	32667607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
Isoform_43316_13	chr2	+	921	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	29	2	-1	-2	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAAGCTTCCTGTGGG	8220	False	NA	4	True	ATTAAA	-14	NA	32665826	32667607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
Isoform_43317_3	chr2	+	2025	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-21	-1052	-21	1052	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCTGTTCTTCCTTTGT	8170	False	NA	NA	False	NA	NA	NA	32665776	32668661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
Isoform_43318_97	chr2	+	3592	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	122	0	122	0	multi-exon	FALSE	canonical	3	292	junction_12	30.0169577319103	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8979	False	NA	19	True	AATAAA	-19	NA	32766247	32815266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_43319_36	chr2	+	3627	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	87	0	87	0	multi-exon	FALSE	canonical	3	292	junction_12	30.0169577319103	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8944	False	NA	19	True	AATAAA	-19	NA	32766212	32815266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_43320_8	chr2	+	3588	14	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.1252265099939	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8981	False	NA	19	True	AATAAA	-19	NA	32766249	32815266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_32766417_32795782_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_43321_7	chr2	+	3624	14	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	87	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	96.1252265099939	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCATGTGCTGCTGG	8944	False	NA	18	True	AATAAA	-18	NA	32766212	32815265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_32766417_32795782_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
Isoform_43325_563	chr2	+	664	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	126	452	-35	1	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5767	False	NA	23	True	AATAAA	-22	NA	32851696	32854056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_43326_812	chr2	+	635	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	155	452	-6	1	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5796	False	NA	23	True	AATAAA	-22	NA	32851725	32854056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_43333_64	chr2	+	756	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-26	-1	-6	1	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTTGGCTGCTTTTTG	5796	False	NA	23	True	AATAAA	-22	NA	32851725	32854056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
Isoform_43340_13	chr2	+	2395	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-321	1037	0	-7	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGGTTGGTATGATG	NA	False	NA	19	True	AATAAA	-13	NA	34296873	34513924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_43341_8	chr2	+	3427	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-316	0	-2	0	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296878	34514961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_43342_5	chr2	+	2077	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	-5	-442	-5	-2	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTATGATGGACCA	NA	False	NA	24	True	AATAAA	-18	NA	34296868	34513929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_43344_7	chr2	+	3013	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296874	34514961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_43345_7	chr2	+	1969	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGGTTGGTATGATG	NA	False	NA	19	True	AATAAA	-13	NA	34296881	34513924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
Isoform_43349_1072	chr2	+	2467	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	122	1083	-3	-67	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTGTGAAAAGTTTG	NA	False	NA	31	True	AATAAA	-22	NA	34662103	34666476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_4335_15	chr10	+	188	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTCTCGACCTT	NA	False	NA	NA	False	NA	NA	NA	117686761	117686949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_117686800_117686900
Isoform_43352_97	chr2	+	2534	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	122	1016	-3	0	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662103	34666543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_43357_40	chr2	+	2616	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	0	-3	0	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662103	34666543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_43358_450	chr2	+	2551	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	65	-3	-65	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGTGAAAAGTTTGTA	NA	False	NA	33	True	AATAAA	-24	NA	34662103	34666478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
Isoform_4337_8	chr10	-	176	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	119962282	119962106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_119962100_119962300
Isoform_43371_4	chr2	+	1587	10	ISM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	33	2697	33	-2697	5prime_fragment	FALSE	canonical	3	40	junction_6	4.49965705140369	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTATGTGAATCAT	NA	False	NA	NA	False	TTTAAA	-24	NA	34999536	35018042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939
Isoform_43372_3	chr2	+	2928	18	ISM	ENSMUSG00000057110.16	ENSMUST00000156933.8	7189	43	24	32965	24	-2526	5prime_fragment	FALSE	canonical	3	34	junction_10	28.3112947737242	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCAAGGCCTTACAG	NA	False	NA	NA	False	AAAAAG	-7	NA	34999527	35035157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068
Isoform_43373_28	chr2	+	2589	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	27	-9	-2	7	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTCTCACTGCTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	35146418	35197911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_43374_32	chr2	+	2542	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10418	-7	10349	5	3prime_fragment	FALSE	canonical	3	17	junction_1	5.90517516674992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTGTCTCACTGCTTT	5209	False	NA	NA	False	AATAAA	-22	NA	35156809	35197909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_43375_11	chr2	+	2599	17	FSM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	57	-3	57	3	multi-exon	FALSE	canonical	1	1	junction_1	8.42591797669548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGGTGTCTCACTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	35172448	35197907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_35172614_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
Isoform_43379_3	chr2	+	6241	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39324	-6	11	1	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTTGCCTTTCTTC	NA	False	NA	10	True	ATTAAA	-20	NA	35551372	35621005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_4338_3	chr10	+	178	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120039858	120040036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_120039900_120040000
Isoform_43381_21	chr2	+	3137	3	ISM	ENSMUSG00000026883.18	ENSMUST00000156669.2	4014	11	12783	1	12783	1	intron_retention	FALSE	canonical	3	229	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTTGCCTTTCTTC	NA	False	NA	10	True	ATTAAA	-20	NA	35613121	35621005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_35613235_35617437_35617526_35618069
Isoform_43382_75	chr2	+	1290	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	275	1058	30	-1058	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAGATAGAGTGGTTT	NA	False	NA	19	True	AATAAA	-20	NA	36026675	36079601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
Isoform_43383_4	chr2	+	1560	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	7	1056	-2	-1056	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATAGAGTGGTTTGG	NA	False	NA	21	True	AATAAA	-22	NA	36026407	36079603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
Isoform_43384_4	chr2	+	1578	10	ISM	ENSMUSG00000035437.16	ENSMUST00000133434.8	1594	11	9	3510	3	-1867	5prime_fragment	FALSE	canonical	3	116	junction_1	50.2610469400128	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCACCTGGGTGCCGA	1548	False	NA	NA	False	NA	NA	NA	37333299	37382091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921
Isoform_43385_3	chr2	+	2380	13	ISM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	5	56975	5	324	5prime_fragment	FALSE	canonical	3	116	junction_1	44.2175021908746	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTGGCTTTTTGGTTT	1550	False	NA	NA	False	NA	NA	NA	37333301	37399474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939
Isoform_43387_3	chr2	+	2264	13	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	8	35498	8	326	5prime_fragment	FALSE	canonical	3	120	junction_1	43.2925288653314	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGCTTTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	37342264	37399476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939
Isoform_43389_4	chr2	+	2882	23	ISM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-37	5044	-15	-3643	5prime_fragment	FALSE	canonical	3	120	junction_1	35.4769160194053	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGATTAAAAAAAACAGCTC	NA	False	NA	NA	False	NA	NA	NA	37342241	37451422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380
Isoform_43390_3	chr2	+	2398	5	FSM	ENSMUSG00000000247.12	ENSMUST00000000253.6	2840	5	437	5	437	-5	multi-exon	FALSE	canonical	0	0	junction_2	2.73861278752583	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGACTCAGTGCTGGTA	NA	False	NA	10	True	AATAAA	-11	NA	38241207	38259740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_38241906_38243322_38243526_38244460_38244865_38249909_38250116_38258853
Isoform_43392_4	chr2	+	1519	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	28	9619	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	103.584925228982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	38401707	38460541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38460314_38460337
Isoform_43393_87	chr2	+	2258	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	45	8035	20	805	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTGGAGGAAACAGTC	NA	False	NA	16	True	TATAAA	-20	NA	38401699	38476583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
Isoform_43395_13	chr2	+	3177	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	45	7116	20	10	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGGACAATCACTATC	NA	False	NA	12	True	AATAAA	-23	NA	38401699	38477502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
Isoform_4340_3	chr14	+	192	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCCTGTTATGGACTG	NA	False	NA	NA	False	NA	NA	NA	37450172	37450364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_37450200_37450400
Isoform_43400_4	chr2	+	948	3	NIC	ENSMUSG00000026755.15	novel	752	4	NA	NA	12	198	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	452.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGCGGTGTGTTCTCTG	NA	False	NA	20	True	AATAAA	-22	NA	38898099	38905603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_38898337_38903734_38903912_38905069
Isoform_43401_56	chr2	+	1000	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-13	197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGCGGTGTGTTCTCT	NA	False	NA	19	True	AATAAA	-21	NA	38898139	38905602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
Isoform_43402_24	chr2	+	1066	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-13	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGCGGTGTGTTCTCTG	NA	False	NA	20	True	AATAAA	-22	NA	38898074	38905603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
Isoform_43403_7	chr2	+	1350	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCTTCAAAAGTCATCC	NA	False	NA	9	True	AATAAA	-20	NA	38898077	38905890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
Isoform_43404_12	chr2	+	1302	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-12	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATTTGTGTGATTACA	NA	False	NA	24	True	AATAAA	-35	NA	38898140	38905905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
Isoform_43405_6	chr2	+	828	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	17	junction_1	10	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTCTTTATATCA	NA	False	NA	NA	False	ATTAAA	-15	NA	45586616	45588457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_45586642_45586810_45587155_45587998
Isoform_43406_12	chr2	+	2838	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	32	2816	32	205	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTACAAATTCACTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	48704152	48790465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
Isoform_43407_3	chr2	+	5659	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	23	4	23	-4	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTGCACATGCAGTTT	NA	False	NA	11	True	AATAAA	-14	NA	48704143	48793277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
Isoform_4341_3	chr7	+	176	1	Intergenic	novelGene_1879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGATAA	2409	False	NA	NA	False	NA	NA	NA	140859831	140860007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_140859800_140860000
Isoform_43410_9	chr2	+	3909	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	19	769	19	-769	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGGCCATGCTGCATA	NA	False	NA	8	True	AATAAA	-13	NA	49341516	49441191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
Isoform_43414_3	chr2	+	2693	9	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81060	34334	-221	4860	internal_fragment	FALSE	canonical	3	18	junction_8	5.02493781056044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGATGATGTTATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	49590369	49630456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
Isoform_4342_11	chr10	+	174	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	120658245	120658419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_120658200_120658400
Isoform_43426_6	chr2	+	4752	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	3540	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	114.82558763923	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAAGAAAAAAAGGCTG	NA	False	NA	NA	False	AATAGA	-27	NA	51962848	52001277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
Isoform_43437_8	chr2	+	1777	14	ISM	ENSMUSG00000036053.18	ENSMUST00000050719.13	3380	27	-96	24434	-88	-24434	5prime_fragment	FALSE	canonical	0	0	junction_1	2.16480727376466	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTCACGAACTGG	5327	False	NA	NA	False	AAGAAA	-35	NA	52747783	52997456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364
Isoform_43439_31	chr2	+	2516	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	29	3	29	-3	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTGTGTAATGGCA	NA	False	NA	21	True	ATTAAA	-14	NA	53082128	53109229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_4344_5	chr10	+	889	1	NIC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	5	-6248	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAGAAACAAGT	NA	False	NA	NA	False	NA	NA	NA	121201018	121201907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_121201000_121201900
Isoform_43440_55	chr2	+	1744	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	29	775	29	-775	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAAGGGTTCTTGTTGTT	NA	False	NA	10	True	AATATA	-22	NA	53082128	53108457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_43441_3	chr2	+	2437	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-662	773	-300	-773	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGTTCTTGTTGTTAT	NA	False	NA	12	True	AATATA	-24	NA	53081437	53108459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
Isoform_43445_7	chr2	+	3637	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	14	2094	14	772	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATACAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	57127703	57258637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_43448_20	chr2	+	3437	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	89	2094	89	772	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATACAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	57128482	57258637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_43449_16	chr2	+	2551	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	17	3052	17	-186	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGATGTTGGTGTG	NA	False	NA	114	True	AAAACA	-6	NA	57128410	57257679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
Isoform_4345_14	chr10	+	2123	1	Genic_Genomic	ENSMUSG00000034707.8	novel	NA	NA	NA	NA	12013	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTCCTTTGTTTTTA	NA	False	NA	9	True	ATTAAA	-21	NA	121231032	121233155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_121231000_121233200
Isoform_43451_4	chr2	+	4646	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-33	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	25.1008848801931	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991160	59185545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142262_59148855_59148989_59152845_59153059_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
Isoform_43452_6	chr2	+	4458	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	25	1	-6	-1	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991218	59185547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
Isoform_43453_6	chr2	+	4551	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	-70	3	-70	-3	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991123	59185545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
Isoform_43455_4	chr2	+	4592	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.1264619826541	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991209	59185549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
Isoform_43457_4	chr2	+	2080	13	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	8	48027	6	-11814	5prime_fragment	TRUE	canonical	3	118	junction_5	19.4186336628851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTCCTAAGTTCCCC	NA	False	NA	NA	False	NA	NA	NA	59442393	59628034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929
Isoform_43458_3	chr2	+	6151	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	10	1261	8	-1259	multi-exon	TRUE	canonical	3	118	junction_5	18.3464360565297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCACTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	59442395	59674800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
Isoform_43459_8	chr2	+	2434	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-175	12	11	4	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATGATC	NA	False	NA	NA	False	NA	NA	NA	60040241	60078305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_4346_3	chr10	-	2977	1	NIC	ENSMUSG00000025795.9	novel	3522	5	NA	NA	32	-58952	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	121312220	121309243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_121309200_121312200
Isoform_43460_147	chr2	+	2309	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	35	1250	9	4	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATGATC	NA	False	NA	NA	False	NA	NA	NA	60040265	60078305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_43461_31	chr2	+	3542	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	47	5	21	-5	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	22	True	AATAAA	-19	NA	60040277	60079550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_43462_5	chr2	+	3667	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	5	-78	5	78	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATGGTTCTATTTTCT	NA	False	NA	6	True	ATTAAA	-18	NA	60040235	60079633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_43463_4	chr2	+	2262	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	119.982290359869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATGATC	NA	False	NA	NA	False	NA	NA	NA	60040263	60078305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
Isoform_43464_5	chr2	+	2276	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	112.133298101901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATGATC	NA	False	NA	NA	False	NA	NA	NA	60040263	60078305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
Isoform_43467_4	chr2	+	417	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	141	8	141	-8	multi-exon	FALSE	canonical	3	174	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAAGTGTGGTGGTAT	9487	False	NA	NA	False	NA	NA	NA	60242009	60242915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_60242062_60242190_60242353_60242712
Isoform_43469_7	chr2	+	1890	8	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	16.9741700527476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACTTACGTCGTGCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	61423489	61484432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_61423553_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_43470_6	chr2	+	1884	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	69	86	10	-5	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGACTTACGTCGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	61423489	61484429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
Isoform_43474_904	chr2	+	1478	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	63	0	-3	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8610	False	NA	31	True	AATAAA	-17	NA	61542100	61630720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
Isoform_43475_184	chr2	+	1525	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	16	0	16	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8563	False	NA	31	True	AATAAA	-17	NA	61542053	61630720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
Isoform_43489_43	chr2	+	2718	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	1	611	1	-611	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTTGTATCATACAAAA	NA	False	NA	13	True	AATAAA	-21	NA	62494629	62523842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
Isoform_43490_28	chr2	+	3205	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	125	0	-125	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTTTTTAAATGTT	NA	False	NA	3	True	AATAAA	-15	NA	62494628	62524328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
Isoform_43498_11	chr2	+	2355	6	FSM	ENSMUSG00000044647.17	ENSMUST00000053910.10	4495	6	-2	2142	-2	-20	multi-exon	FALSE	canonical	2	6	junction_1	3.18747549010185	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTGAATCGTT	5676	False	NA	-7	True	NA	NA	NA	65676183	65853808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_65676229_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
Isoform_43499_3	chr2	+	1607	10	FSM	ENSMUSG00000027035.11	ENSMUST00000028426.9	7038	10	47	5384	18	254	multi-exon	FALSE	canonical	3	48	junction_8	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGGCTCGTGATTGA	NA	False	NA	NA	False	NA	NA	NA	68691831	68939242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
Isoform_4350_10	chr10	-	2006	1	Genic_Genomic	ENSMUSG00000112478.2	novel	NA	NA	NA	NA	-1166	-3553	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAAAAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	17200142	17198136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_17198100_17200100
Isoform_43500_3	chr2	+	4049	10	FSM	ENSMUSG00000027035.11	ENSMUST00000028426.9	7038	10	28	2961	-1	2677	multi-exon	TRUE	canonical	3	48	junction_8	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACGAACGCATTCAA	NA	False	NA	NA	False	ACTAAA	-44	NA	68691812	68941665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
Isoform_43501_11	chr2	+	1477	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	-11	2	-11	-2	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATGTTTTGAAAGTAT	NA	False	NA	4	True	AATAAA	-18	NA	69477540	69497913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
Isoform_43503_16	chr2	+	1023	11	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	5	25	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	133.943420891061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCCCGAAAGCATAAG	NA	False	NA	NA	False	AAGAAA	-31	NA	69553153	69571982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829
Isoform_43510_12	chr2	+	1561	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	19	4547	19	-83	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAGTGAAGAAAAGG	NA	False	NA	156	True	GATAAA	-8	NA	69553167	69579809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
Isoform_43511_9	chr2	+	1104	10	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-48	12374	-48	25	5prime_fragment	FALSE	canonical	3	35	junction_1	114.123173656502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCCCGAAAGCATAAG	NA	False	NA	NA	False	AAGAAA	-31	NA	69553388	69571982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829
Isoform_43513_12	chr2	+	2181	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	7	6	-3	-5	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATGTCTTCTGAAA	NA	False	NA	20	True	AATAAA	-10	NA	69620000	69627561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
Isoform_43514_124	chr2	+	2232	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	28	0	4	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69620007	69627567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
Isoform_43518_6	chr2	+	2194	4	FSM	ENSMUSG00000027088.11	ENSMUST00000151298.8	667	4	41	-1568	4	-1	multi-exon	FALSE	canonical	3	8	junction_2	45.0653845971483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCTTCTGAAATCTT	NA	False	NA	24	True	AATAAA	-14	NA	69620007	69627565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69620301_69620629_69620666_69622716_69622836_69625819
Isoform_43519_3	chr2	+	2176	4	NIC	ENSMUSG00000027088.11	novel	2260	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	45.0653845971483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69620007	69627567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_69620301_69620629_69620666_69622736_69622836_69625819
Isoform_43522_119	chr2	+	703	6	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	29	4233	29	1	5prime_fragment	FALSE	canonical	3	1600	junction_1	84.8608272408418	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTTCTTAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	69691934	69697897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795
Isoform_43523_235	chr2	+	671	6	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	61	4233	0	1	5prime_fragment	FALSE	canonical	3	1600	junction_1	84.8608272408418	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTTCTTAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	69691966	69697897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795
Isoform_43530_9	chr2	+	2039	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	62	-100	1	40	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGATGTGGTGTTTC	NA	False	NA	62	True	NA	NA	NA	69691967	69702230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
Isoform_43534_7	chr2	+	2275	4	ISM	ENSMUSG00000068882.14	ENSMUST00000156057.2	666	6	-1689	1597	-21	1	5prime_fragment	FALSE	canonical	3	1786	junction_1	21.853044537445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTTCTTAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	69691945	69697897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615
Isoform_43535_8	chr2	+	2224	5	NIC	ENSMUSG00000068882.14	novel	634	6	NA	NA	19	1	intron_retention	FALSE	canonical	3	1757	junction_4	31.3318926973779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTTCTTAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	69691924	69697897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795
Isoform_43537_93	chr2	+	1897	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	198	5	198	-5	multi-exon	FALSE	canonical	3	75	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCTGGTCTCCTCTGA	NA	False	NA	18	True	AATAAA	-35	NA	70305464	70308068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70305661_70306367
Isoform_4354_25	chr10	+	2047	1	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	126877826	126879873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_126877800_126879900
Isoform_43540_54	chr2	+	1156	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	38	2	38	-2	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGCCTCCCGTTCAG	NA	False	NA	7	True	AATAAA	-16	NA	70491971	70519702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
Isoform_43541_15	chr2	+	1261	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-67	2	-53	-2	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGCCTCCCGTTCAG	NA	False	NA	7	True	AATAAA	-16	NA	70491866	70519702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
Isoform_43543_201	chr2	+	2201	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	19	18	5	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491938	70522069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
Isoform_43544_22	chr2	+	2283	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-63	18	-63	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491856	70522069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
Isoform_43554_10	chr2	+	1393	10	ISM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	-107	4057	1	1129	5prime_fragment	FALSE	canonical	3	195	junction_1	18.2357673234921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGACATTGTTGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	70886088	70914931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768
Isoform_43558_19	chr2	+	2503	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	1	5235	1	345	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTTCAATTCATCAGT	NA	False	NA	16	True	NA	NA	NA	70886088	70920967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
Isoform_43560_6	chr2	+	1949	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	-46	2	-9	-2	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGGCTTTATGACTAT	NA	False	NA	10	True	AATAAA	-19	NA	70886078	70929484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
Isoform_43561_17	chr2	+	1957	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	6	-1472	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATATTCCATGG	NA	False	NA	NA	False	NA	NA	NA	70886133	70924730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
Isoform_43562_4	chr2	+	2187	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	1	-1472	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	57.9623382297611	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATATTCCATGG	NA	False	NA	NA	False	NA	NA	NA	70886125	70924730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924319
Isoform_43565_19	chr2	+	2476	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	0	-10	0	-2	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCACTTTTACTTTTT	NA	False	NA	22	True	AATAAA	-24	NA	71042101	71093645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_43566_7	chr2	+	2541	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-68	-7	-16	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	19	True	AATAAA	-21	NA	71042033	71093642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_43568_103	chr2	+	2481	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	148	2	-2	-2	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCACTTTTACTTTTT	NA	False	NA	22	True	AATAAA	-24	NA	71042325	71093645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
Isoform_43573_785	chr2	+	1493	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-28	111	-28	-111	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCACCGCCCACTGCTT	5090	False	NA	13	True	AATAAA	-14	NA	71219575	71271855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
Isoform_43574_12	chr2	+	1529	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-10	57	-10	-57	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATTAAGTTATAATGTG	5108	False	NA	2	True	AATAAA	-13	NA	71219593	71271909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
Isoform_43579_16	chr2	+	1224	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	70	27	-5	-27	multi-exon	TRUE	canonical	3	42	junction_6	11.0565326201412	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283689	71355508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
Isoform_43580_3	chr2	+	527	3	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-64	-2	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_1	15	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATCAAGACTCGGTTG	NA	False	NA	3	True	ATTAAA	-16	NA	71549696	71561308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_71549853_71560693_71560778_71561021
Isoform_43581_4	chr2	+	710	4	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	9.8770215933527	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGACTCGGTTGCTTTCC	NA	False	NA	9	True	ATTAAA	-22	NA	71549729	71561314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_71549853_71553630_71553841_71560693_71560778_71561021
Isoform_43582_4	chr2	-	1159	2	Antisense	novelGene_ENSMUSG00000084794.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCCAAAAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	71580660	71578423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_71579277_71580354
Isoform_43583_3	chr2	+	4154	26	FSM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	-10	12	1	1	multi-exon	FALSE	canonical	0	0	junction_1	107.199447759772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATCTTTA	NA	False	NA	NA	False	NA	NA	NA	71617273	71687103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71617353_71617427_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_43589_100	chr2	+	4219	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	1	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATCTTTA	NA	False	NA	NA	False	NA	NA	NA	71617283	71687103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_4359_8	chr10	+	2040	1	NIC	ENSMUSG00000025408.16	novel	890	4	NA	NA	3	-1746	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	127126665	127128705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_127126700_127128700
Isoform_43591_12	chr2	+	5803	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-74	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	25	True	AGTAAA	-14	NA	71617282	71688686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_43594_36	chr2	+	5686	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-190	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71617283	71688570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_43595_4	chr2	+	5900	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-19	-5	intron_retention	FALSE	non_canonical	0	0	junction_15	109.064193317004	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGTAATTTTATTTA	NA	False	NA	94	True	TATAAA	-9	NA	71617253	71688755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671319_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
Isoform_43597_4	chr2	+	987	5	ISM	ENSMUSG00000006494.12	ENSMUST00000134362.8	1060	6	-7	2129	-1	-1	5prime_fragment	FALSE	canonical	3	213	junction_1	15.9902313929474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAAGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	71703662	71714527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186
Isoform_43598_16	chr2	+	3300	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	11	1874	11	-2	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGCCCTCTCCAAG	NA	False	NA	9	True	AATAAA	-21	NA	71703578	71732328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_43599_112	chr2	+	3217	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	94	1874	-2	-2	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGCCCTCTCCAAG	NA	False	NA	9	True	AATAAA	-21	NA	71703661	71732328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_4360_4	chr10	-	183	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTTGTTTGTTTTTTT	NA	False	NA	-16	True	NA	NA	NA	127150995	127150812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_127150800_127151000
Isoform_43600_9	chr2	+	5079	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	94	12	-2	-12	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCCTGTAGTCTTCAT	NA	False	NA	9	True	ATTAAA	-19	NA	71703661	71734190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
Isoform_43606_6	chr2	+	3228	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	103	3	12	-3	multi-exon	FALSE	canonical	2	3	junction_12	12.7949955590981	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGATTGTATGGTGG	3337	False	NA	NA	False	AATAAA	-19	NA	72116083	72272951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
Isoform_43607_22	chr2	+	2498	10	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	28	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	503.918644227419	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8597	False	NA	NA	False	AATAAA	-13	NA	72306530	72317234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_72306656_72309249_72309373_72309957_72310063_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
Isoform_43610_1154	chr2	+	2385	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	37	2	37	-2	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTTTATTTTTGT	8606	False	NA	NA	False	AATAAA	-14	NA	72306539	72317235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
Isoform_43619_4	chr2	+	497	3	FSM	ENSMUSG00000063714.16	ENSMUST00000146195.2	364	3	-79	-54	13	-7	multi-exon	FALSE	canonical	1	21	junction_2	38	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGCAAATCTCCTGC	NA	False	NA	13	True	NA	NA	NA	72809780	72818944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_72809940_72817871_72817977_72818711
Isoform_4362_3	chr10	+	1535	1	Genic_Genomic	ENSMUSG00000040195.12	novel	NA	NA	NA	NA	-11	9736	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAGCAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	127512921	127514456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_127512900_127514500
Isoform_43620_14	chr2	+	514	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	-6	75	-6	-5	multi-exon	FALSE	canonical	1	97	junction_1	49.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCAAATCTCCTGCAA	NA	False	NA	15	True	NA	NA	NA	72809761	72818946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_72809940_72817871_72817977_72818715
Isoform_43622_7	chr2	+	1892	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	3	2	-2	-2	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGATTACTTTGGTTG	NA	False	NA	NA	False	AATAAA	-34	NA	73143000	73151138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
Isoform_43623_16	chr2	+	3243	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	59	7	1	-7	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTGATCTT	NA	False	NA	NA	False	AATAAA	-23	NA	73143003	73168155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
Isoform_43625_3	chr2	+	2749	2	FSM	ENSMUSG00000001819.5	ENSMUST00000001872.5	2483	2	-266	0	-266	0	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTATTTGACATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74498387	74501943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_74499423_74500229
Isoform_43626_4	chr2	+	2114	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	18	4	18	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTTGTGTGACTGCTC	NA	False	NA	NA	False	AATAAA	-37	NA	74528088	74530548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_74529178_74529523
Isoform_43627_128	chr2	+	1242	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	14	1694	-13	233	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTCATTTACTTT	NA	False	NA	15	True	AATAAA	-13	NA	74656160	74707081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
Isoform_4363_5	chr10	+	692	1	Genic_Genomic	ENSMUSG00000025395.15	novel	NA	NA	NA	NA	-9	-6271	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	971	False	NA	NA	False	NA	NA	NA	127851027	127851719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_127851000_127851700
Isoform_43630_97	chr2	+	1858	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	3292	0	-6	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGCTGTTTGGTTTTT	7481	False	NA	NA	False	AAAAAG	-7	NA	75489610	75496459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43631_20	chr2	+	2248	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2902	0	384	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7481	False	NA	20	True	AATAAA	-20	NA	75489610	75496849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43632_5	chr2	+	3036	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2114	0	1172	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	7481	False	NA	NA	False	ATTAAA	-16	NA	75489610	75497637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43635_123	chr2	+	1579	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	0	75	0	-75	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7475	False	NA	NA	False	NA	NA	NA	75489604	75496108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43636_15	chr2	+	2315	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-667	0	385	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCTGGCATGCTTTCC	7481	False	NA	21	True	AATAAA	-21	NA	75489610	75496850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43637_5	chr2	+	3109	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-2	-1453	-2	1171	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCCTTTTATTCAT	7473	False	NA	NA	False	ATTAAA	-15	NA	75489602	75497636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43638_84	chr2	+	1929	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-281	0	-1	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTGGTTTTTGTGCA	7481	False	NA	NA	False	AAAAAG	-12	NA	75489610	75496464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
Isoform_43646_5	chr2	+	1744	11	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	72	17090	72	155	5prime_fragment	FALSE	canonical	3	679	junction_7	52.2421285936934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAGAAA	571	False	NA	NA	False	NA	NA	NA	75662604	75708462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814
Isoform_43647_38	chr2	+	5555	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	97	1707	85	-1707	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGGAAGTGTGGAGC	584	False	NA	15	True	AATAAA	-26	NA	75662617	75759987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_43651_15	chr2	+	5652	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	0	1707	0	-1707	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGGAAGTGTGGAGC	487	False	NA	15	True	AATAAA	-26	NA	75662520	75759987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_43653_17	chr2	+	2091	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	71	5197	59	5	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGAGTTGGTTTTT	558	False	NA	NA	False	AATATA	-37	NA	75662591	75756497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
Isoform_43655_160	chr2	+	1873	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	23	2	23	-2	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGACTTATTTATATG	NA	False	NA	53	True	AATAAA	-19	NA	76200350	76214110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
Isoform_43656_21	chr2	+	1898	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	-2	2	-2	-2	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGACTTATTTATATG	NA	False	NA	53	True	AATAAA	-19	NA	76200325	76214110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
Isoform_43659_8	chr2	+	2406	10	NNC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	23	5793	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	106.437717254369	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTTACAGTCTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	76200350	76219905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76219060
Isoform_43662_4	chr2	+	925	2	FSM	ENSMUSG00000042359.19	ENSMUST00000134213.2	422	2	-44	-459	9	-5	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCAACTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	76236860	76238270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76237034_76237518
Isoform_43664_11	chr2	+	3436	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCTTATAGCTACG	NA	False	NA	3	True	AATAAA	-14	NA	76236857	76426386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_43665_4	chr2	+	3369	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	10.767427733679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCTTATAGCTACG	NA	False	NA	3	True	AATAAA	-14	NA	76236849	76426386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_43666_3	chr2	+	2236	16	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	13.7242688532233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTCAGAGTTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	76236880	76410380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
Isoform_43667_4	chr2	+	3353	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-42	542	8	9	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTACGCGTGGTTTCTGG	NA	False	NA	15	True	AATAAA	-26	NA	76236859	76426398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_43668_4	chr2	+	3494	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-44	403	6	148	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	76236857	76426537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_43669_4	chr2	+	3266	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCTTATAGCTACG	NA	False	NA	3	True	AATAAA	-14	NA	76236859	76426386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
Isoform_4367_6	chr17	-	174	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAACCC	NA	False	NA	NA	False	NA	NA	NA	29780232	29780058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_29780100_29780200
Isoform_43670_7	chr2	+	2512	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	22	0	22	0	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTTTGTTTATTG	6528	False	NA	6	True	ATTAAA	-19	NA	76505646	76527172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_43671_19	chr2	+	2235	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	47	252	47	-252	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6553	False	NA	3	True	ATTAAA	-16	NA	76505671	76526920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
Isoform_43672_10	chr2	+	2220	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	28	1	28	-1	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGGTCCTAAGTATGG	NA	False	NA	NA	False	AATAAA	-19	NA	78699418	78751636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43674_68	chr2	+	1547	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-8	710	-8	286	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78699382	78750927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43675_11	chr2	+	1621	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-82	710	-82	286	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78699308	78750927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43676_26	chr2	+	1673	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-1	577	-1	419	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGTAGAGTT	NA	False	NA	7	True	ATTAAA	-14	NA	78699389	78751060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43678_8	chr2	+	1314	7	NNC	ENSMUSG00000027011.15	novel	2249	6	NA	NA	-23	286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.873401956883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78699367	78750927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_78699378_78699625_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43681_6	chr2	+	1771	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-99	577	-99	419	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGTAGAGTT	NA	False	NA	7	True	ATTAAA	-14	NA	78699291	78751060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
Isoform_43689_6	chr2	+	3634	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	228	180	228	-180	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTACTTTTTACTAAAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	80146037	80184207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_4369_5	chr10	+	2328	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTAAATTT	NA	False	NA	NA	False	NA	NA	NA	127932748	127935076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_127932700_127935100
Isoform_43691_6	chr2	+	3413	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	2	627	2	-627	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTACTGTATAGACA	NA	False	NA	4	True	AATAAA	-20	NA	80145811	80183760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_43692_55	chr2	+	3789	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	254	-1	254	1	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTTGAAGATGATT	NA	False	NA	13	True	AATAAA	-19	NA	80146063	80184388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_43693_16	chr2	+	3420	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	211	411	211	-411	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGTTGGTTTTGTTT	NA	False	NA	9	True	CATAAA	-13	NA	80146020	80183976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
Isoform_43695_3	chr2	+	674	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	125	525	-1	381	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATCTAGTTAAGTGTT	NA	False	NA	20	True	AATACA	-30	NA	80447568	80461549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
Isoform_43696_41	chr2	+	980	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	180	472	-1	365	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTTGTTATTTCAG	NA	False	NA	4	True	AATACA	-14	NA	80447568	80461533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
Isoform_43698_5	chr2	+	853	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-27	1167	8	370	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTATTTCAGTATCT	NA	False	NA	9	True	AATACA	-19	NA	80447582	80461538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
Isoform_43699_99	chr2	+	1518	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	43	-2	27	-2	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTTTGGAAGGTTG	NA	False	NA	14	True	AATAAA	-23	NA	80469202	80489248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
Isoform_4370_13	chr10	-	177	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	127935685	127935508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_127935500_127935700
Isoform_43700_11	chr2	+	1759	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	10	-210	-6	206	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTAAGTTTGTTAATA	NA	False	NA	NA	False	AATAAA	-14	NA	80469169	80489456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
Isoform_43709_76	chr2	+	2002	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	102	7	0	-7	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAACTATGGGCCTTTT	NA	False	NA	21	True	AATAAA	-29	NA	83474880	83494959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_43710_63	chr2	+	2051	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	53	7	7	-7	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAACTATGGGCCTTTT	NA	False	NA	21	True	AATAAA	-29	NA	83474831	83494959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
Isoform_43711_35	chr2	+	3387	4	NIC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	13	-7	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.2659863237109	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGATTTGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	84489435	84499117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84489938_84490440_84490526_84491774_84491945_84496487
Isoform_43714_63	chr2	+	2028	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	33	-2	33	2	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGGAGTCTTCCCTGT	3390	False	NA	14	True	AATAAA	-23	NA	84508778	84518561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
Isoform_43718_5	chr2	+	1636	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	-249	173	-249	-173	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84628922	84640347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
Isoform_43719_82	chr2	+	1364	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	22	174	16	-174	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTTCTCGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	84629193	84640346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
Isoform_43720_269	chr2	+	632	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	57	1	57	-1	multi-exon	FALSE	canonical	3	373	junction_1	17.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGTCTTTACTTGAG	6474	False	NA	9	True	ATTAAA	-14	NA	84657397	84660556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84657492_84657942_84658058_84660133
Isoform_43721_5	chr2	+	507	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	25	158	25	-58	multi-exon	FALSE	canonical	3	373	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCACATGTGAAACCTGT	6442	False	NA	NA	False	ATTAAA	-14	NA	84657365	84660399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84657492_84657942_84658058_84660133
Isoform_43722_45	chr2	+	2342	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	NA	False	NA	5	True	AATAAA	-7	NA	84669760	84693918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43723_14	chr2	+	2403	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	NA	False	NA	16	True	AATAAA	-18	NA	84669710	84693929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43726_16	chr2	+	2583	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	-52	8	-39	0	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	NA	False	NA	9	True	AATAAA	-11	NA	84669699	84693922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43727_92	chr2	+	2529	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	9	1	0	-1	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	NA	False	NA	16	True	AATAAA	-18	NA	84669760	84693929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43730_4	chr2	+	3433	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-2	-16	intron_retention	FALSE	canonical	3	43	junction_1	15.4214942598667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGGGAAATGAAAT	NA	False	NA	-7	True	NA	NA	NA	84669758	84693906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43731_12	chr2	+	2550	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	-1	7	-1	-4	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	306	False	NA	5	True	AATAAA	-7	NA	84670541	84693918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43733_5	chr2	+	2919	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	-452	20	-26	-4	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	281	False	NA	5	True	AATAAA	-7	NA	84670516	84693918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43734_11	chr2	+	2436	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	31	20	31	-4	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATCTGGCTGGTGTG	764	False	NA	5	True	AATAAA	-7	NA	84670999	84693918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
Isoform_43736_9	chr2	+	2030	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	-26	579	-8	-579	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAACAGAAAC	NA	False	NA	NA	False	AAGAAA	-11	NA	84766981	84788274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
Isoform_43737_9	chr2	+	1966	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	38	579	13	-579	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAACAGAAAC	NA	False	NA	NA	False	AAGAAA	-11	NA	84767045	84788274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
Isoform_43742_1417	chr2	+	2783	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-46	2	-46	1	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867531	84877451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_43748_114	chr2	+	2690	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	32	-1	28	1	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867826	84877451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_43754_112	chr2	+	2974	16	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	228	2	7	1	3prime_fragment	FALSE	canonical	3	1260	junction_6	129.702223059848	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867805	84877451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
Isoform_4376_6	chr10	+	200	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTAAAAAAAAAT	NA	False	NA	NA	False	AAGAAA	-34	NA	128004850	128005050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128004800_128005000
Isoform_43763_10	chr2	+	3092	6	NIC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	4	108	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	24.7030362506312	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAGTTTGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	84878369	84893037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231
Isoform_43767_76	chr2	+	5722	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	44.7158152361265	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84878400	84903389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_43769_28	chr2	+	5754	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	65.513735863381	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84878364	84903389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
Isoform_4377_3	chr10	+	175	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAATTTTTTTTAAAAA	6753	False	NA	NA	False	NA	NA	NA	128050201	128050376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128050200_128050400
Isoform_43770_82	chr2	+	5047	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	3	2177	-3	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTGTATATTAAGATT	NA	False	NA	13	True	AATAAA	-15	NA	90509735	90566669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
Isoform_43780_9	chr2	+	3492	11	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	191	11866	-43	1079	intron_retention	FALSE	canonical	3	188	junction_7	18.6614576065215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATAACC	NA	False	NA	NA	False	CATAAA	-16	NA	90575904	90599499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751
Isoform_43784_8	chr2	+	4604	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-46	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575901	90611363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_43787_41	chr2	+	3943	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	199	549	-35	-549	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGGTTATCCTTTTGCT	NA	False	NA	8	True	AATAAA	-17	NA	90575912	90610816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_43789_29	chr2	+	4480	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	209	2	-25	-2	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575922	90611363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_4379_8	chr10	+	243	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	128168223	128168466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128168200_128168500
Isoform_43792_4	chr2	+	5476	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTCTTGATTAGC	NA	False	NA	16	True	AATAAA	-20	NA	90575900	90611363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_43793_4	chr2	+	4908	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-25	-548	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTTATCCTTTTGCTC	NA	False	NA	9	True	AATAAA	-18	NA	90575922	90610817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
Isoform_43794_16	chr2	+	1066	13	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	179	False	NA	45	True	NA	NA	NA	90677581	90695729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43796_25	chr2	+	2323	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	98	175	0	-5	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCACCATGCTTAGCCT	194	False	NA	2	True	NA	NA	NA	90677596	90696979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43797_54	chr2	+	1158	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	13	1425	-10	-3	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	109	False	NA	45	True	NA	NA	NA	90677511	90695729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43799_456	chr2	+	1099	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	72	1425	-4	-3	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	168	False	NA	45	True	NA	NA	NA	90677570	90695729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43802_83	chr2	+	1012	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	14	1255	0	-3	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGGTGATTGGTGTC	228	False	NA	45	True	NA	NA	NA	90677630	90695729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43803_24	chr2	+	1093	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-60	1248	-18	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	154	False	NA	52	True	NA	NA	NA	90677556	90695736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
Isoform_43807_21	chr2	+	2309	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	29	5	0	-5	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTTGTGTGTCTGTGT	2364	False	NA	NA	False	AATAAA	-37	NA	90735112	90740900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
Isoform_43808_154	chr2	+	2406	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	26	5	0	-5	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTTGTGTGTCTGTGT	2364	False	NA	NA	False	AATAAA	-37	NA	90735112	90740900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
Isoform_43814_5	chr2	+	3575	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-13	1833	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	234.180464163684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAAGAAAAAA	2365	False	NA	NA	False	TTTAAA	-35	NA	90770789	90845550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_43818_10	chr2	+	4740	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	93	-3	32	3	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2410	False	NA	11	True	ATTAAA	-11	NA	90770834	90849838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_43835_49	chr2	+	3377	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	-55	4292	30	1833	multi-exon	FALSE	canonical	3	151	junction_13	169.345415711454	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAAGAAAAAA	2408	False	NA	NA	False	TTTAAA	-35	NA	90770832	90845550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_43837_24	chr2	+	4594	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	90	-6	29	-1	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2407	False	NA	14	True	ATTAAA	-14	NA	90770831	90849841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_4384_4	chr10	+	159	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAATA	5052	False	NA	NA	False	NA	NA	NA	128199790	128199949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128199800_128199900
Isoform_43843_19	chr2	+	3387	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	11	1833	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	210.490045302854	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAAGAAAAAA	2389	False	NA	NA	False	TTTAAA	-35	NA	90770813	90845550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
Isoform_43844_7	chr2	+	2157	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	19	-2432	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGCTCCTGAACACATT	2397	False	NA	NA	False	AATAAA	-30	NA	90770821	90847403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_43849_20	chr2	+	4582	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2408	False	NA	15	True	ATTAAA	-15	NA	90770832	90849842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
Isoform_4385_6	chr10	-	186	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTCACTGAAAAAAAAAAAA	3000	False	NA	NA	False	NA	NA	NA	128208805	128208619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_128208600_128208800
Isoform_43855_11	chr2	+	1642	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-36	0	-15	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865949	90876074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
Isoform_43858_208	chr2	+	1354	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	288	-6	-4	4	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTCAGCCTCTGTGG	NA	False	NA	24	True	AATAAA	-25	NA	90884641	90889783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
Isoform_43859_87	chr2	+	1580	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	62	-6	16	4	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTCAGCCTCTGTGG	NA	False	NA	24	True	AATAAA	-25	NA	90884415	90889783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
Isoform_4386_3	chr10	+	329	1	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAAGAAACTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	128315509	128315838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128315500_128315800
Isoform_43860_20	chr2	+	1620	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	22	-6	22	4	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTCAGCCTCTGTGG	NA	False	NA	24	True	AATAAA	-25	NA	90884375	90889783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
Isoform_43862_16	chr2	+	1407	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	618	9	-66	-9	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCCCAGAGAAGTGTC	9235	False	NA	12	True	AGTAAA	-13	NA	90927058	90946092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
Isoform_43864_3	chr2	+	3260	23	NIC	ENSMUSG00000002100.16	novel	4163	35	NA	NA	4648	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	2.43425960709016	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGTCTCCTGTTCATG	NA	False	NA	NA	False	AATAAA	-22	NA	90953136	90966861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90953364_90954230_90954364_90954728_90954854_90954931_90955038_90955121_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90961823_90961908_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
Isoform_43865_20	chr2	+	2698	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	2	1952	2	3	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGTCTCCAAGATATAT	5062	False	NA	13	True	AATAAA	-27	NA	91033258	91042490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
Isoform_43866_23	chr2	+	2022	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	7	2623	-5	-668	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGTTCTGTGCCTTTT	5067	False	NA	3	True	AATGAA	-15	NA	91033263	91041819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
Isoform_43868_16	chr2	+	3687	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	7	958	-5	-958	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	5067	False	NA	NA	False	NA	NA	NA	91033263	91043484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
Isoform_43870_16	chr2	+	1841	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	22	-1	-3	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4772	False	NA	20	True	AATAAA	-17	NA	91087179	91095024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_43871_6	chr2	+	1836	11	FSM	ENSMUSG00000027257.14	ENSMUST00000168916.8	1859	11	22	1	-3	0	multi-exon	FALSE	canonical	3	10	junction_1	24.287651183266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4772	False	NA	19	True	AATAAA	-16	NA	91087179	91095023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91087272_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_43872_16	chr2	+	1775	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCGTCTTTTGATAG	4772	False	NA	18	True	AATAAA	-15	NA	91087179	91095022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
Isoform_43873_309	chr2	+	2735	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	333	0	14	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5835	False	NA	NA	False	AATAAA	-25	NA	91095651	91107276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_43874_34	chr2	+	2824	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	244	0	-75	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5746	False	NA	NA	False	AATAAA	-25	NA	91095562	91107276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_43875_82	chr2	+	2772	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	296	0	-23	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5798	False	NA	NA	False	AATAAA	-25	NA	91095614	91107276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_43876_20	chr2	+	2917	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	159	-8	159	8	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCCTGCCTCCCTGCCC	5661	False	NA	NA	False	AATAAA	-33	NA	91095477	91107284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
Isoform_43878_7	chr2	+	2899	15	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	197	junction_10	19.7247642959457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5822	False	NA	NA	False	AATAAA	-25	NA	91095638	91107276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105512_91105620_91105740_91106109
Isoform_4388_3	chr10	-	177	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAACACAAAA	2316	False	NA	NA	False	NA	NA	NA	128367742	128367565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_128367600_128367700
Isoform_43881_20	chr2	+	2492	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	18	34490	18	2	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGAACTGCCTAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	91287873	91309634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
Isoform_43882_11	chr2	+	2590	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-79	34489	-79	3	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAACTGCCTAGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	91287776	91309635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
Isoform_43883_3	chr2	+	3027	17	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	45442	1	-3001	-1	3prime_fragment	FALSE	canonical	3	564	junction_6	40.380804536314	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCATTTCCCAAAATG	NA	False	NA	8	True	AATAAA	-13	NA	91422108	91451006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
Isoform_43884_3	chr2	+	2499	13	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	50054	-3	288	1	3prime_fragment	FALSE	canonical	3	564	junction_2	42.9135921228798	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91426720	91451010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
Isoform_43885_3	chr2	+	1668	8	ISM	ENSMUSG00000040549.17	ENSMUST00000111337.3	6384	42	61111	2	11356	-1	3prime_fragment	FALSE	canonical	3	631	junction_1	34.5082066548033	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCATTTCCCAAAATG	NA	False	NA	8	True	AATAAA	-13	NA	91437788	91451006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
Isoform_43886_47	chr2	+	2846	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	8	12	8	-12	multi-exon	TRUE	canonical	3	46	junction_2	93.668116113923	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480574	91502659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_43888_159	chr2	+	2819	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	370	12	8	-12	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480574	91502659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_43889_8	chr2	+	2921	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	268	12	10	-12	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480472	91502659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_4389_6	chr10	+	183	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGAGAGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	128372778	128372961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128372800_128373000
Isoform_43892_39	chr2	+	2759	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	112	12	8	-12	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91480574	91502659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_43893_4	chr2	+	2954	14	NIC	ENSMUSG00000027247.17	novel	1479	7	NA	NA	-1	-12	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	89.3866675257611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAAACCCATTTGG	NA	False	NA	NA	False	AATAAA	-7	NA	91481841	91502659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
Isoform_43897_43	chr2	+	2083	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3392	False	NA	NA	False	NA	NA	NA	91541216	91551891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91541321_91542424_91543211_91550698
Isoform_43899_3	chr2	+	2291	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	12	202	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3385	False	NA	NA	False	NA	NA	NA	91541209	91552092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91541321_91542424_91543211_91550698
Isoform_43900_34	chr2	+	2193	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3372	False	NA	NA	False	NA	NA	NA	91541196	91551891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91541411_91542424_91543211_91550698
Isoform_43902_3	chr2	+	2374	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	19	202	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3392	False	NA	NA	False	NA	NA	NA	91541216	91552092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_91541411_91542424_91543211_91550698
Isoform_43903_33	chr2	+	2349	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-40	-1	29	1	multi-exon	FALSE	canonical	3	50	junction_1	26	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3402	False	NA	NA	False	NA	NA	NA	91541226	91551891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91541597_91542424_91543211_91550698
Isoform_43904_35	chr2	+	2319	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-10	-1	-5	1	multi-exon	FALSE	canonical	3	50	junction_1	26	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAGAACTA	3432	False	NA	NA	False	NA	NA	NA	91541256	91551891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91541597_91542424_91543211_91550698
Isoform_43909_12	chr2	+	4991	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	30	0	-18	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560508	91749194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
Isoform_43910_3	chr2	+	1144	11	FSM	ENSMUSG00000027222.15	ENSMUST00000155891.8	1167	11	22	1	22	-1	multi-exon	FALSE	canonical	2	7	junction_1	67.8416538713496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTGGCTCTGTGTCA	NA	False	NA	19	True	AATAAA	-19	NA	92205042	92211560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_92205167_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_43911_89	chr2	+	1198	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	194	0	7	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205844	92211562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_43912_5	chr2	+	1456	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	-66	2	-66	-1	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTGGCTCTGTGTCA	NA	False	NA	19	True	AATAAA	-19	NA	92205584	92211560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
Isoform_43914_3	chr2	+	3428	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	5	328	5	-328	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGTGTTTCTCTTTGT	NA	False	NA	13	True	AATAAA	-22	NA	92745447	92786075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
Isoform_43915_5	chr2	+	2791	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	126.560015407711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017929	93032097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_43916_15	chr2	+	2798	8	NIC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	9	3	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	86.7591082085498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017937	93032097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_93018093_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_43917_33	chr2	+	2644	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	52	7	16	3	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017944	93032097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_43918_61	chr2	+	2648	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	9	-3	9	3	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTGCGTGGTGTCCT	NA	False	NA	13	True	NA	NA	NA	93017937	93032097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
Isoform_43920_4	chr2	+	5457	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-8	720	3	-720	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAGAA	NA	False	NA	NA	False	TTTAAA	-22	NA	101508776	101531294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
Isoform_43927_87	chr2	+	1187	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	4	0	-3	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716601	101731991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
Isoform_43929_4	chr2	+	1423	6	ISM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	36	8	16	-2	intron_retention	FALSE	canonical	3	333	junction_2	37.3363094051889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGAGTTGGAAATTTT	4629	False	NA	17	True	AATAAA	-39	NA	102904055	102922981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093
Isoform_43930_140	chr2	+	876	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	38	5	18	1	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGAAATTTTCTT	4631	False	NA	20	True	AATAAA	-42	NA	102904057	102922984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
Isoform_43931_12	chr2	+	962	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	-48	5	-48	1	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGAAATTTTCTT	4545	False	NA	20	True	AATAAA	-42	NA	102903971	102922984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
Isoform_43932_37	chr2	+	4559	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	2	-3	2	3	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATCTGCTCCTGGTAA	NA	False	NA	5	True	AATAAA	-19	NA	103396656	103548771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
Isoform_43933_4	chr2	+	4618	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	-57	-3	-57	3	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATCTGCTCCTGGTAA	NA	False	NA	5	True	AATAAA	-19	NA	103396597	103548771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
Isoform_43934_10	chr2	+	3724	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-14	10	0	4	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCAACTGTATTTAT	NA	False	NA	4	True	NA	NA	NA	103858190	103887839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
Isoform_43937_7	chr2	+	3778	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-64	6	-48	-6	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACTGTATTTATTTAT	NA	False	NA	8	True	NA	NA	NA	103858140	103887843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
Isoform_43938_24	chr2	+	2759	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCAACTGTATTTAT	NA	False	NA	4	True	NA	NA	NA	103858181	103887839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
Isoform_43939_49	chr2	+	2784	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	119	1837	-4	-1600	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATACACAGTCTACTGC	NA	False	NA	34	True	ATTAAA	-30	NA	103858184	103891748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_43940_27	chr2	+	2877	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	125	1738	0	-1501	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103858190	103891847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_43941_74	chr2	+	2394	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	113	2233	-10	-1996	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTGTGTAAGTGC	NA	False	NA	34	True	AATGAA	-32	NA	103858178	103891352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_43942_8	chr2	+	3365	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	122	1253	-1	-1016	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTAATGACTCATTTCTT	NA	False	NA	NA	False	GATAAA	-19	NA	103858187	103892332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
Isoform_43944_3	chr2	+	1472	4	FSM	ENSMUSG00000068686.13	ENSMUST00000129749.8	434	4	-65	-973	-23	661	multi-exon	FALSE	canonical	3	21	junction_3	22.7596133534821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCAAAACAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	103900170	103915963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103914766
Isoform_43945_4	chr2	+	585	5	FSM	ENSMUSG00000068686.13	ENSMUST00000111131.9	555	5	-1	-29	-1	2	multi-exon	FALSE	canonical	2	5	junction_4	30.2933573576783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	103900192	103921534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103920473_103920620_103921348
Isoform_43946_3	chr2	+	767	6	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	28	49	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	100.476066802	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGGGAGGAGTTTAA	NA	False	NA	1	True	AATAAA	-19	NA	103926212	103944657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_103926273_103928069_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
Isoform_43947_7	chr2	+	595	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	56	1040	17	51	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGGAGGAGTTTAAGC	NA	False	NA	3	True	AATAAA	-21	NA	103926201	103944659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
Isoform_43948_15	chr2	+	364	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	52	1275	13	-184	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTGTAACAAAAGTGAC	NA	False	NA	NA	False	ATTAAA	-21	NA	103926197	103944424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
Isoform_43950_3	chr2	+	586	4	FSM	ENSMUSG00000086454.8	ENSMUST00000125854.8	582	4	-2	-2	-2	2	multi-exon	FALSE	canonical	2	29	junction_3	243.142390837596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGTTCAAGCCTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	104389526	104401776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104389552_104390068_104390321_104398205_104398278_104401539
Isoform_43956_6	chr2	+	1417	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7111	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	104389526	104391284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_104389830_104390068_104390321_104390422
Isoform_43959_12	chr2	+	1720	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	114	intron_retention	FALSE	canonical	3	251	junction_2	163	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_104390321_104398205_104398836_104398995
Isoform_43961_5	chr2	+	760	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-118	2	-23	-2	multi-exon	FALSE	canonical	3	327	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGTGCTTTAGCCTT	6877	False	NA	2	True	ATTAAA	-14	NA	104420844	104439772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104421048_104439215
Isoform_43962_3	chr2	+	1164	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-107	-413	-12	413	multi-exon	FALSE	canonical	3	327	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAACCCAAAAC	6888	False	NA	NA	False	NA	NA	NA	104420855	104440187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104421048_104439215
Isoform_43963_19	chr2	+	643	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-32	1978	-23	-1	multi-exon	FALSE	canonical	3	327	junction_1	20.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGCTTTAGCCTTT	6877	False	NA	3	True	ATTAAA	-15	NA	104420844	104439773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104421048_104439215_104439318_104439435
Isoform_43966_78	chr2	+	2830	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-23	10	-23	-10	multi-exon	FALSE	canonical	3	179	junction_7	45.0891062231222	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGCCTCCTCCTGTT	6877	False	NA	9	True	AATAAA	-10	NA	104420844	104495764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
Isoform_43967_5	chr2	+	2865	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-58	10	-58	-10	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGCCTCCTCCTGTT	6842	False	NA	9	True	AATAAA	-10	NA	104420809	104495764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
Isoform_43968_115	chr2	+	772	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	43	140	43	-140	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105735025	105795763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_43969_5	chr2	+	907	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	43	5	43	-5	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATGACTATCTCAT	NA	False	NA	NA	False	TATAAA	-17	NA	105735025	105795898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_43970_8	chr2	+	680	6	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	1	-140	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	170.067516004674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105734983	105795763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_105735076_105738668_105738775_105763609_105763699_105767336_105767464_105794524_105794636_105795608
Isoform_43972_6	chr2	+	1712	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	211	925	211	229	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAGATTAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-27	NA	106523824	106697776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
Isoform_43974_3	chr2	+	1985	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	-30	10	-4	-10	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAATATTAAAGACA	1460	False	NA	NA	False	AATACA	-3	NA	109111166	109141169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
Isoform_43976_64	chr2	+	3265	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	102	2	0	-2	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTGGTTTTCCTGTT	1478	False	NA	23	True	ATTAAA	-14	NA	109111184	109172090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_43977_3	chr2	+	4255	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	52	-938	-36	938	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAAATGCTATTGAGTCT	1428	False	NA	NA	False	AATAAA	-26	NA	109111134	109173030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
Isoform_43978_4	chr2	+	2320	2	ISM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	-17	23	0	-23	intron_retention	FALSE	canonical	3	366	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109721197	109727060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_109721267_109724809
Isoform_43979_18	chr2	+	733	4	FSM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	-10	23	7	-23	multi-exon	FALSE	canonical	3	366	junction_1	18.4932420089069	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109721204	109727060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580
Isoform_43980_26	chr2	+	4219	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	9	0	-9	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTATTTCAGGGGTA	NA	False	NA	22	True	AGTAAA	-12	NA	109721197	109731339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
Isoform_43988_21	chr2	+	5056	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	0	4	0	-4	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTATTGAAAACTGTT	NA	False	NA	36	True	ATTAAA	-18	NA	109747991	109844598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
Isoform_4399_10	chr10	+	176	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	1856	False	NA	NA	False	NA	NA	NA	128490957	128491133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_128491000_128491100
Isoform_43993_10	chr2	+	1398	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	19	653	19	-1	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTACTCTGTTAT	NA	False	NA	32	True	AATAAA	-18	NA	109848180	109875008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
Isoform_43994_16	chr2	+	1951	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	322	2	322	-2	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCAGAGGGTGGAATCA	NA	False	NA	NA	False	NA	NA	NA	112070134	112077454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_43995_4	chr2	+	2207	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	366	-298	366	298	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAGTCCCACGGAGAG	NA	False	NA	NA	False	NA	NA	NA	112070178	112077754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_43996_35	chr2	+	1913	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	362	0	362	0	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070174	112077456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
Isoform_43997_1094	chr2	+	463	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	41	605	41	-605	multi-exon	FALSE	canonical	3	3938	junction_1	0	1094	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCATTTTGTGTGTTGT	NA	False	NA	22	True	ATTAAA	-16	NA	112092311	112093009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112092423_112092657
Isoform_4400_15	chr10	-	1140	1	Genic_Genomic	ENSMUSG00000000711.4	novel	NA	NA	NA	NA	-26	-13348	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128532159	128531019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_128531000_128532200
Isoform_44001_3	chr2	+	4175	12	ISM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	62841	2	423	-2	3prime_fragment	FALSE	canonical	3	94	junction_5	5.05016160448405	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATAAGTTGTGCTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	112177762	112193499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
Isoform_44002_16	chr2	+	2883	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-2	5	-2	-5	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209553	112244580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_44003_74	chr2	+	2861	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	20	5	5	-5	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209575	112244580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_44005_4	chr2	+	2019	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-38	905	-38	-905	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTTTAATTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	112209517	112243680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
Isoform_44007_347	chr2	+	1062	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	39	4725	39	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	399	False	NA	4	True	ATTAAA	-17	NA	112285380	112297782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
Isoform_44010_20	chr2	+	1423	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-8	3320	-8	342	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCCTTTCTTCAC	NA	False	NA	4	True	AATAAA	-15	NA	112323300	112461598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
Isoform_44011_3	chr2	+	2605	11	FSM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	-13	178	-13	-178	multi-exon	FALSE	canonical	3	13	junction_9	96.2369991219593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGTTACCAGTTTGG	NA	False	NA	9	True	ATTAAA	-18	NA	115412183	115609071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517526_115517651_115607382
Isoform_44012_64	chr2	+	2627	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-71	179	-54	-179	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412142	115609070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_44016_9	chr2	+	2774	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-29	-10	-12	10	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGGAGCCCTGACAT	NA	False	NA	17	True	AATAAA	-27	NA	115412184	115609259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
Isoform_44017_6	chr2	+	2659	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-22	-179	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	116.799821691248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412174	115609070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
Isoform_44019_128	chr2	+	423	4	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	0	11324	0	-25	5prime_fragment	FALSE	canonical	2	2	junction_2	0.471404520791032	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAACATAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	117080219	117090697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_117080320_117088114_117088261_117089701_117089837_117090655
Isoform_44023_9	chr2	+	3004	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	8	31952	8	-9008	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAACTCAAGGACTTT	NA	False	NA	17	True	AATACA	-28	NA	118219106	118273763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
Isoform_44025_10	chr2	+	5199	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	13	0	13	0	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219111	118305715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
Isoform_44027_665	chr2	+	3624	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	44	0	44	0	multi-exon	FALSE	canonical	3	422	junction_10	74.3091181573454	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428735	118472072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
Isoform_44028_39	chr2	+	3657	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	11	0	11	0	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428702	118472072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
Isoform_44034_5	chr2	+	1504	10	FSM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	-87	-578	-23	4	multi-exon	FALSE	canonical	2	5	junction_7	167.506403046953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGACTAACACTAGG	NA	False	NA	25	True	AATAAA	-18	NA	118644689	118665127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118661292_118661451_118662033_118662109_118664480
Isoform_44035_10	chr2	+	3907	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	201	494	-28	59	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACACTTCAAAAGACT	NA	False	NA	10	True	ATTAAA	-10	NA	118644684	118667683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_44036_25	chr2	+	2864	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	206	1532	-23	-979	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTTAACCTGCCTTC	NA	False	NA	4	True	NA	NA	NA	118644689	118666645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_44039_149	chr2	+	1346	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	206	3050	-23	4	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGACTAACACTAGG	NA	False	NA	25	True	AATAAA	-18	NA	118644689	118665127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
Isoform_4404_3	chr10	-	230	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCACAATTAATATATGC	9569	False	NA	NA	False	AAAAAG	-20	NA	128667166	128666936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_128666900_128667200
Isoform_44042_246	chr2	+	2066	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	1559	-34	335	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTCTGCGCCCAAAGC	NA	False	NA	43	True	ATTAAA	-15	NA	118692474	118711831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
Isoform_44044_15	chr2	+	3599	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	41	25	-33	-25	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGACAAAATAAAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	118692475	118713365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
Isoform_44045_28	chr2	+	1976	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	350	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGTGTTCTGCAGGAG	NA	False	NA	58	True	ATTAAA	-30	NA	118692474	118711846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
Isoform_44047_9	chr2	+	1118	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.6920917631333	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	118692474	118707750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118707622
Isoform_44048_4	chr2	+	4349	7	NIC	ENSMUSG00000040007.9	novel	662	2	NA	NA	7	-3	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	12.733376963276	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTATTTTCTGTGTG	NA	False	NA	19	True	AATAAA	-29	NA	118730864	118755006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
Isoform_44049_60	chr2	+	2093	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	14	599	14	-599	multi-exon	FALSE	canonical	3	106	junction_2	2.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTTTTTTTTTTTT	3269	False	NA	3	True	NA	NA	NA	118865284	118869651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118865950_118867398_118867696_118868520
Isoform_44052_3	chr2	+	3481	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	95	-870	95	870	multi-exon	FALSE	canonical	3	106	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTGAAGATTTCTTGT	3350	False	NA	NA	False	ATTAAA	-19	NA	118865365	118871120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118865950_118867398_118867696_118868520
Isoform_44054_3	chr2	+	5101	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	31	-2426	31	2426	multi-exon	FALSE	canonical	3	106	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTATAGCATAAACATT	3286	False	NA	NA	False	NA	NA	NA	118865301	118872676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118865950_118867398_118867696_118868520
Isoform_44057_27	chr2	+	1535	8	FSM	ENSMUSG00000027326.14	ENSMUST00000152380.8	1573	8	28	10	0	-10	multi-exon	FALSE	canonical	3	17	junction_1	17.907927784951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAACATTAAAAAAGAAA	7239	False	NA	NA	False	AATAAA	-18	NA	118877627	118899742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
Isoform_44058_14	chr2	+	1541	8	NIC	ENSMUSG00000027326.14	novel	1573	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	17.5963818173289	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATTAAAAAAGAAATAA	7239	False	NA	NA	False	AATAAA	-21	NA	118877627	118899745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
Isoform_4406_20	chr10	-	210	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAACA	9856	False	NA	NA	False	NA	NA	NA	128734417	128734207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_128734200_128734400
Isoform_44061_75	chr2	+	1872	8	FSM	ENSMUSG00000027326.14	ENSMUST00000028799.12	5527	8	-3	3658	0	-10	multi-exon	FALSE	canonical	3	41	junction_1	11.0822527732683	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAACATTAAAAAAGAAA	7239	False	NA	NA	False	AATAAA	-18	NA	118877627	118899742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
Isoform_44068_131	chr2	+	1791	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	11	1566	1	516	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943298	118966205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_44069_75	chr2	+	2096	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	48	1224	38	858	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATTTGGAAGAAAGC	NA	False	NA	3	True	ATTAAA	-10	NA	118943335	118966547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_4407_3	chr10	-	165	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTGAATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	19443344	19443179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_19443200_19443300
Isoform_44070_150	chr2	+	1754	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	48	1566	38	516	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943335	118966205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_44071_15	chr2	+	1997	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-195	1566	-181	516	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943092	118966205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_44073_7	chr2	+	2339	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-195	1224	-181	858	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATTTGGAAGAAAGC	NA	False	NA	3	True	ATTAAA	-10	NA	118943092	118966547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
Isoform_4408_5	chr10	-	495	1	FSM	ENSMUSG00000020003.17	ENSMUST00000214951.2	4114	1	-30	3649	8	-3649	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	19783427	19782932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_19782900_19783400
Isoform_44082_58	chr2	+	1628	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	379	1	1	-1	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	290	False	NA	7	True	NA	NA	NA	119039493	119047529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
Isoform_44083_9	chr2	+	2558	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-292	7	-292	-7	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067550	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44085_292	chr2	+	2268	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-2	7	-2	-7	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067840	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44087_22	chr2	+	2525	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-259	7	-259	-7	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067583	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_4409_3	chr10	-	175	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	19807192	19807017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_19807000_19807200
Isoform_44090_29	chr2	+	2266	11	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.4056839421167	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067840	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075992_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44091_69	chr2	+	2239	11	FSM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	-14	-312	-14	-7	multi-exon	FALSE	canonical	3	41	junction_1	81.6752104374393	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067943	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44093_16	chr2	+	2241	11	NNC	ENSMUSG00000027315.14	novel	1913	11	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.974398908479	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067939	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119068028_119068181_119068725_119075635_119075764_119075992_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44094_18	chr2	+	2397	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	-94	20	-18	-7	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119067939	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44096_20	chr2	+	2216	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	87	20	87	-7	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119068120	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44099_33	chr2	+	2121	10	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	180	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.6029574093827	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTGTTGTGTTTGT	NA	False	NA	6	True	ATTAAA	-6	NA	119068213	119079988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119068725_119075635_119075764_119075992_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
Isoform_44102_3	chr2	+	3188	4	FSM	ENSMUSG00000034216.13	ENSMUST00000139367.8	3194	4	7	-1	5	1	multi-exon	FALSE	canonical	3	64	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6382	False	NA	NA	False	NA	NA	NA	119119227	119125969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399
Isoform_44103_58	chr2	+	3731	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	0	323	0	-196	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCTACAATGGTGGCCCT	6377	False	NA	-10	True	ATTAAA	-2	NA	119119222	119128611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
Isoform_44105_11	chr2	+	3949	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	11	94	11	33	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCAAGCCTTTGAGCC	6388	False	NA	NA	False	AAAAAG	-13	NA	119119233	119128840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
Isoform_44106_291	chr2	+	1515	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	64	58	64	-58	multi-exon	FALSE	canonical	3	568	junction_2	33	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGTTTGTCTCTGTA	7216	False	NA	23	True	CATAAA	-23	NA	119181773	119184804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119182118_119182837_119182874_119183669
Isoform_44107_217	chr2	+	1579	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	0	58	0	-58	multi-exon	FALSE	canonical	3	568	junction_2	33	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGTTTGTCTCTGTA	7152	False	NA	23	True	CATAAA	-23	NA	119181709	119184804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119182118_119182837_119182874_119183669
Isoform_4411_4	chr10	+	1501	1	FSM	ENSMUSG00000037608.17	ENSMUST00000216560.2	3064	1	-70	1633	-7	-1633	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAGAAAAATTGAAAGG	2783	False	NA	NA	False	TTTAAA	-25	NA	20188207	20189708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_20188200_20189700
Isoform_44110_98	chr2	+	2546	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	52	11	28	1	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGAACTTGGTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	119378229	119417497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
Isoform_44112_6	chr2	+	1345	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	33	3	27	-3	multi-exon	FALSE	canonical	3	71	junction_2	178.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGTACTTGGACAGAT	NA	False	NA	NA	False	TATAAA	-26	NA	119424810	119431224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119424916_119426739_119426824_119430068
Isoform_44113_10	chr2	+	640	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	33	708	27	-708	multi-exon	FALSE	canonical	3	71	junction_2	178.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGTTATCTAAATTC	NA	False	NA	4	True	AATATA	-12	NA	119424810	119430519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119424916_119426739_119426824_119430068
Isoform_44115_4	chr2	+	2047	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	34	-700	28	700	multi-exon	FALSE	canonical	3	71	junction_2	178.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTTTAAGGTAAC	NA	False	NA	14	True	AATAAA	-11	NA	119424811	119431927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119424916_119426739_119426824_119430068
Isoform_44116_18	chr2	+	2224	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	20	6056	20	700	multi-exon	FALSE	canonical	3	345	junction_2	41.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTTTAAGGTAAC	NA	False	NA	14	True	AATAAA	-11	NA	119424803	119431927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119424916_119426739_119426993_119430068
Isoform_4412_6	chr10	-	209	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAATA	3359	False	NA	NA	False	NA	NA	NA	21407224	21407015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_21407000_21407200
Isoform_44121_36	chr2	+	809	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	27	7464	27	-708	multi-exon	FALSE	canonical	3	345	junction_2	41.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGTTATCTAAATTC	NA	False	NA	4	True	AATATA	-12	NA	119424810	119430519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119424916_119426739_119426993_119430068
Isoform_44128_345	chr2	+	2149	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	432	379	1	-379	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTTTTAAGCGTAAG	NA	False	NA	16	True	AATAAA	-19	NA	119449210	119480262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_44130_7	chr2	+	2529	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	431	0	0	0	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATCTATAGTTCAGTAC	NA	False	NA	NA	False	AATAAA	-21	NA	119449209	119480641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_44136_15	chr2	+	2050	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	13	1463	1	-379	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTTTTAAGCGTAAG	NA	False	NA	16	True	AATAAA	-19	NA	119449210	119480262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
Isoform_44139_42	chr2	+	654	4	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	16	29771	12	-6826	5prime_fragment	FALSE	canonical	3	115	junction_3	4.64279609239471	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGTAAGCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	119505564	119536117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919
Isoform_4414_7	chr10	-	995	1	Antisense	novelGene_ENSMUSG00000019970.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21870435	21869440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_-_21869400_21870400
Isoform_44140_42	chr2	+	699	5	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	10	24411	6	-1466	5prime_fragment	FALSE	canonical	3	77	junction_4	18.907670401189	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAGAAGAAAGAA	NA	False	NA	NA	False	ACTAAA	-9	NA	119505558	119541477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445
Isoform_44141_334	chr2	+	1830	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572805	119581744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
Isoform_44142_144	chr2	+	1860	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-42	0	-42	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572775	119581744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
Isoform_44146_28	chr2	+	3667	19	NIC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	39	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	57.453819351064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119629846	119648583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119629897_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_44147_313	chr2	+	3737	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	236	16	236	-3	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGAATCAAAGCTT	NA	False	NA	NA	False	AATAAA	-6	NA	119630230	119648569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_44149_96	chr2	+	3950	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	37	2	37	-2	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	119630031	119648583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_44151_11	chr2	+	4086	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	-101	4	86	-4	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCTTTGTTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	119629893	119648581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_44152_8	chr2	+	4132	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	-148	5	39	-5	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTTTGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	119629846	119648580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
Isoform_44155_11	chr2	+	3516	9	ISM	ENSMUSG00000033943.16	ENSMUST00000156510.2	6995	21	-19	34103	-19	0	5prime_fragment	FALSE	canonical	3	29	junction_1	30.7235658737719	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAAGAGAAAGAAG	NA	False	NA	12	True	NA	NA	NA	119727766	119757172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859
Isoform_44156_7	chr2	+	1439	8	ISM	ENSMUSG00000033852.17	ENSMUST00000162393.8	5092	27	1	10435	1	-2395	5prime_fragment	FALSE	canonical	3	18	junction_5	45.292248289327	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCTCATGTTCCCCGT	NA	False	NA	10	True	NA	NA	NA	119857974	119863079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
Isoform_44157_81	chr2	+	1360	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	13	0	-8	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857976	119863075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
Isoform_44158_16	chr2	+	1284	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857975	119863075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
Isoform_44159_3	chr2	+	1735	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	85	junction_1	31.8094325633137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857961	119863074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119862482_119862594
Isoform_44160_22	chr2	+	1261	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857979	119863075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
Isoform_44161_3	chr2	+	1189	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	57.5902769571392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857974	119863075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862321_119862482_119862594
Isoform_44162_3	chr2	+	2161	5	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	4	-3	intron_retention	FALSE	canonical	3	85	junction_1	30.5399328748444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACACTTGTTCTCATGT	NA	False	NA	3	True	NA	NA	NA	119857967	119863072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119862482_119862594
Isoform_44163_3	chr2	+	2432	4	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	85	junction_1	35.2167889254858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857972	119863075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860538_119860693_119860769_119862482_119862594
Isoform_44164_6	chr2	+	1273	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	46.6533022651655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACTTGTTCTCATGTT	NA	False	NA	4	True	NA	NA	NA	119857976	119863073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
Isoform_44165_9	chr2	+	1554	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	297	1248	-8	-1248	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	120234673	120252892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
Isoform_44166_5	chr2	+	2005	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-11	664	9	-664	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTATTAGCTCTCT	NA	False	NA	26	True	AATAAA	-31	NA	120398160	120431072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_44167_29	chr2	+	2682	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	39	2	-11	-2	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACAGACCAGTAATGC	NA	False	NA	8	True	NA	NA	NA	120398190	120431734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_44168_93	chr2	+	2032	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	24	667	-2	-667	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGCTGTATTAGCTC	NA	False	NA	23	True	AATAAA	-28	NA	120398175	120431069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_4417_4	chr10	+	1071	1	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	17	-21070	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22034484	22035555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_22034500_22035600
Isoform_44170_46	chr2	+	1958	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	1	764	1	-764	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTAATGTTTCTATGA	NA	False	NA	17	True	ATTAAA	-29	NA	120398152	120430972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
Isoform_44177_12	chr2	+	3099	7	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.533354591835	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGCTCCAATATGAATC	NA	False	NA	NA	False	AATAAA	-15	NA	120439893	120452040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455_120449930_120449953
Isoform_44184_4	chr2	+	3028	6	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	133.775932065525	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGCTCCAATATGAA	NA	False	NA	NA	False	AATAAA	-13	NA	120439892	120452038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455_120449930_120449953
Isoform_44186_78	chr2	+	1512	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	45	12	0	-12	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGTCATTTAATGT	NA	False	NA	9	True	AATAAA	-18	NA	120838928	120847373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
Isoform_44187_15	chr2	+	2534	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-66	9	0	-9	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAATGTATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	120970912	120987150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_44188_40	chr2	+	2591	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAATGTATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	120970912	120987150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
Isoform_4419_3	chr14	-	218	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGGCTCAGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	14785461	14785243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_14785200_14785500
Isoform_44191_4	chr2	+	3270	8	ISM	ENSMUSG00000027263.13	ENSMUST00000110657.2	1992	15	-32	7489	-4	4	intron_retention	FALSE	canonical	3	163	junction_4	30.3240996636036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	121001716	121017203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814
Isoform_44194_40	chr2	+	3595	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-24	635	-18	-634	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGTTTGCTGTAC	NA	False	NA	19	True	AATAAA	-20	NA	121001671	121028616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_44198_29	chr2	+	4178	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	28	0	3	0	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001723	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_4420_3	chr10	+	689	1	NIC	ENSMUSG00000019997.12	novel	2398	5	NA	NA	60	-180	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAAAAGAAAAGCCCCT	NA	False	NA	NA	False	NA	NA	NA	24471399	24472088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_24471400_24472100
Isoform_44200_12	chr2	+	2892	19	FSM	ENSMUSG00000027263.13	ENSMUST00000144076.8	2887	19	-4	-1	-4	0	multi-exon	FALSE	canonical	3	47	junction_18	58.617614173199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001716	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_44204_32	chr2	+	3591	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	23	636	-18	-635	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTTTGTTTGCTGTA	NA	False	NA	18	True	AATAAA	-19	NA	121001671	121028615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_44205_20	chr2	+	4221	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	29	0	-12	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001677	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_44214_27	chr2	+	2885	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	31	-1	0	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001720	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_44219_5	chr2	+	3504	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	5	-642	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATCTCCCTTTGTT	NA	False	NA	11	True	AATAAA	-12	NA	121001700	121028608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_4422_8	chr10	-	296	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGCCAGTGTAAAAG	NA	False	NA	NA	False	ATTAAA	-7	NA	25259564	25259268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_25259300_25259600
Isoform_44220_5	chr2	+	3483	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	0	-640	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	56.955266163455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCCCTTTGTTTG	NA	False	NA	13	True	AATAAA	-14	NA	121001720	121028610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_44222_5	chr2	+	4171	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-16	0	intron_retention	FALSE	canonical	3	61	junction_3	56.955266163455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001673	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
Isoform_44223_7	chr2	+	2883	18	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_17	69.0773098816422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001668	121029251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
Isoform_44224_4	chr2	+	3297	4	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	-20	7206	-20	-5389	5prime_fragment	FALSE	canonical	0	0	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAAGAATGTAAC	NA	False	NA	NA	False	NA	NA	NA	121125914	121132713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_121126024_121129077_121129161_121129386_121129528_121129749
Isoform_44225_62	chr2	+	1518	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	801	False	NA	32	True	AGTAAA	-20	NA	121188256	121194218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_44226_4	chr2	+	1504	10	NIC	ENSMUSG00000000308.15	novel	1620	9	NA	NA	30	-8	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.8743660217344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGCAGCTGTCTGTGT	895	False	NA	23	True	AGTAAA	-11	NA	121188350	121194209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121188430_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_44227_72	chr2	+	1610	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	9	1	9	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	1644	False	NA	31	True	AGTAAA	-19	NA	121189099	121194217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
Isoform_4423_3	chr10	-	176	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATGTTTTAAATTT	NA	False	NA	NA	False	NA	NA	NA	25751732	25751556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_25751600_25751700
Isoform_44234_1976	chr2	+	1888	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	175	707	67	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244430	121268461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
Isoform_44235_640	chr2	+	1947	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	116	707	8	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244371	121268461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
Isoform_4425_10	chr10	+	929	1	FSM	ENSMUSG00000112808.2	ENSMUST00000218296.2	633	1	-37	-259	-37	259	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTTCAT	NA	False	NA	NA	False	NA	NA	NA	25983649	25984578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_25983600_25984600
Isoform_44251_6	chr2	+	538	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	-12	-1	3	1	multi-exon	FALSE	canonical	3	183	junction_2	2874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGAGCGCCTGGTTTGA	NA	False	NA	-2	True	ATTAAA	-15	NA	121279851	121281536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121279923_121280455_121280565_121281178
Isoform_44252_90	chr2	+	500	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	193	2363	5	3	multi-exon	FALSE	canonical	3	5931	junction_1	722	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	NA	False	NA	0	True	ATTAAA	-17	NA	121279868	121281538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_44253_5	chr2	+	2496	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	154	406	-19	9	multi-exon	FALSE	canonical	3	5931	junction_1	722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGGTAGAAGTTGG	NA	False	NA	12	True	NA	NA	NA	121279829	121283495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_44255_13	chr2	+	658	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	36	2362	36	4	multi-exon	FALSE	canonical	3	5931	junction_1	722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCGCCTGGTTTGACTG	NA	False	NA	1	True	ATTAAA	-18	NA	121279711	121281539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121279923_121280455_121280565_121281201
Isoform_44256_3	chr2	+	978	2	NIC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	23	-5	intron_retention	FALSE	canonical	3	7375	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATTCCTTGAGCGCCTG	NA	False	NA	-8	True	ATTAAA	-9	NA	121279915	121281530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121280565_121281201
Isoform_44257_90	chr2	+	601	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	122	238	-39	-2	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGGCTCTTATATTGT	NA	False	NA	10	True	TATAAA	-18	NA	121287565	121288915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_44259_197	chr2	+	570	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	153	238	-8	-2	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGGCTCTTATATTGT	NA	False	NA	10	True	TATAAA	-18	NA	121287596	121288915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_44260_381	chr2	+	446	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	153	362	-8	4	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTTCAGTTTC	NA	False	NA	24	True	AATAAA	-19	NA	121287596	121288791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
Isoform_44263_13	chr2	+	777	5	ISM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	-17	7799	15	-7223	5prime_fragment	FALSE	canonical	3	42	junction_4	6.13901457890434	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAATGTAAG	NA	False	NA	NA	False	NA	NA	NA	121337218	121356047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932
Isoform_44265_16	chr2	+	744	5	ISM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	18	7797	1	-7221	5prime_fragment	FALSE	canonical	3	42	junction_4	6.13901457890434	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAAATGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	121337253	121356049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932
Isoform_44268_12	chr2	+	755	5	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	-14	17441	-14	-7221	5prime_fragment	FALSE	canonical	3	27	junction_1	11.2998893799895	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAAATGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	121340314	121356049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932
Isoform_44274_9	chr2	+	3745	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	134	junction_10	36.99513481527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121697579	121766388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765678_121765705
Isoform_44275_7	chr2	+	3924	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-21	312	-21	1	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	9	True	AATAAA	-18	NA	121697429	121766389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
Isoform_44277_4	chr2	+	3724	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	-4	at_least_one_novel_splicesite	TRUE	non_canonical	3	90	junction_8	48.2649580217315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCACAGTTTTGATT	NA	False	NA	4	True	AATAAA	-13	NA	121697428	121766384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765678_121765705
Isoform_44281_15	chr2	+	3571	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	455	1027	-4	0	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121786936	121843096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
Isoform_4429_5	chr10	+	177	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAGAACATAAGCTC	NA	False	NA	NA	False	NA	NA	NA	27449062	27449239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_27449100_27449200
Isoform_44290_45	chr2	+	2397	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	48	2968	48	-2968	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	121859074	121884111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_44291_5	chr2	+	2462	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	-17	2968	-17	-2968	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	121859009	121884111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_44292_67	chr2	+	1793	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	43	3577	43	-3577	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTGTGTTATATCCC	NA	False	NA	NA	False	AATAAA	-19	NA	121859069	121883502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
Isoform_44296_27	chr2	+	847	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	13	0	-13	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAACTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121978166	121983551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
Isoform_44297_32	chr2	+	646	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	214	0	-214	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGTTGATCATATGCC	NA	False	NA	NA	False	AATAAA	-14	NA	121978166	121983350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
Isoform_44298_9	chr2	+	2102	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	7	6	7	-6	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1952	False	NA	NA	False	AATAAA	-9	NA	122016759	122036872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_44299_4	chr2	+	1981	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGTTTCTCAAAGT	1936	False	NA	NA	False	AATAAA	-12	NA	122016743	122036875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_4430_11	chr10	+	2430	1	FSM	ENSMUSG00000019889.11	ENSMUST00000219107.2	2364	1	-67	1	-16	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	27950833	27953263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_27950800_27953300
Isoform_44300_9	chr2	+	1919	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGTTTCTCAAAGT	1936	False	NA	NA	False	AATAAA	-12	NA	122016743	122036875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
Isoform_44301_5	chr2	+	2106	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	114	6	-88	-6	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2059	False	NA	NA	False	AATAAA	-9	NA	122016866	122036872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_44302_3	chr2	+	1965	5	FSM	ENSMUSG00000027229.6	ENSMUST00000149861.2	448	5	-87	-1430	-87	-6	multi-exon	FALSE	canonical	3	28	junction_1	43.0486643230658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2060	False	NA	NA	False	AATAAA	-9	NA	122016867	122036872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
Isoform_44303_11	chr2	+	1904	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	-88	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2059	False	NA	NA	False	AATAAA	-9	NA	122016866	122036872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
Isoform_44305_251	chr2	+	2292	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	59	1	59	-1	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTATGTGGTTTGTGCC	NA	False	NA	15	True	AATAAA	-18	NA	122065288	122095820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
Isoform_44309_7	chr2	+	2313	8	FSM	ENSMUSG00000118663.1	ENSMUST00000239506.1	2347	8	7	27	7	6	multi-exon	FALSE	canonical	3	8	junction_2	2.6954231805876	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTGCAAGTTTCCAC	NA	False	NA	NA	False	ATTAAA	-29	NA	122461126	122474723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529
Isoform_44310_6	chr2	+	677	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	4	111	4	-5	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATGATTTGTGCAAG	NA	False	NA	18	True	AATAAA	-20	NA	122479773	122483000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
Isoform_44313_44	chr2	+	2083	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	28	1373	1	3	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCGATTCTTTTCAT	8297	False	NA	7	True	AATAAA	-19	NA	122580450	122590022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
Isoform_44314_8	chr2	+	3454	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	28	2	1	-2	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTGTTTATCAGACAC	8297	False	NA	13	True	AATAAA	-16	NA	122580450	122591393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
Isoform_44316_7	chr2	+	2077	5	FSM	ENSMUSG00000005804.15	ENSMUST00000148460.8	2088	5	12	-1	1	1	multi-exon	FALSE	canonical	3	17	junction_2	54.4443523241851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTGGCGATTCTTTTC	8297	False	NA	5	True	AATAAA	-17	NA	122580450	122590020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122580625_122584508_122584651_122586049_122586134_122587974_122588062_122588430
Isoform_44317_3	chr2	+	1631	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	31	292	31	-292	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTAACACTTAATT	NA	False	NA	2	True	AATAAA	-15	NA	124910074	124930305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
Isoform_44318_41	chr2	+	944	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	58	18	58	-18	multi-exon	TRUE	canonical	3	52	junction_1	864.28364685572	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGATTTTACATAAACT	NA	False	NA	14	True	AATAAA	-15	NA	125089167	125099650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_44322_31	chr2	+	1636	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	79	-183	-79	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGTGTCCTGTTGTTGC	NA	False	NA	38	True	NA	NA	NA	125089636	125100449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_44324_1479	chr2	+	837	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	878	-183	-18	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGATTTTACATAAACT	NA	False	NA	14	True	AATAAA	-15	NA	125089636	125099650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_44326_41	chr2	+	1035	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	39	876	39	-16	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089440	125099652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
Isoform_44334_6	chr2	+	1930	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	-41	716	-16	-4	multi-exon	FALSE	canonical	3	11	junction_1	32.0916896284673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGTGTGTTGCTCTTG	NA	False	NA	4	True	ATTAAA	-11	NA	125701012	125825503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
Isoform_44338_54	chr2	+	1792	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	135	1	-1	-1	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTGCTCTTGAAT	NA	False	NA	7	True	ATTAAA	-14	NA	125708161	125825506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
Isoform_44339_60	chr2	+	1296	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	45	1	45	-1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCGCCCTTACCTTTC	7324	False	NA	24	True	ATTAAA	-22	NA	125994105	126007195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
Isoform_44340_3	chr2	+	1400	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	-60	2	-60	-2	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCGCCCTTACCTTT	7219	False	NA	23	True	ATTAAA	-21	NA	125994000	126007194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
Isoform_44343_233	chr2	+	2300	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	617	1	-566	-1	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACGAGGCTTCGCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	126394943	126430162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
Isoform_44344_117	chr2	+	2335	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	582	1	582	-1	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACGAGGCTTCGCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	126394908	126430162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
Isoform_4435_15	chr10	-	238	1	FSM	ENSMUSG00000069682.7	ENSMUST00000168697.4	495	1	304	-47	295	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGGAAAAAAAAAATCAATA	NA	False	NA	-11	True	AATAAA	-18	NA	29574982	29574744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29574700_29575000
Isoform_44356_155	chr2	+	4117	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	22	6	5	1	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCATTTGAAACCTT	3598	False	NA	0	True	ATTAAA	-14	NA	126549284	126601211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
Isoform_44357_3	chr2	+	4185	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	95.8447819248509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCATTTGAAACCTT	3611	False	NA	0	True	ATTAAA	-14	NA	126549297	126601211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
Isoform_44358_13	chr2	+	4594	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	-14	20	-1	-20	multi-exon	TRUE	canonical	3	34	junction_11	7.58468852359805	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126850635	126909809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
Isoform_44362_4	chr2	+	2305	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	28	-873	0	873	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAACTCAGCGTCCTGGG	2237	False	NA	NA	False	NA	NA	NA	126912612	126930663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
Isoform_44363_4	chr2	+	1032	6	NIC	ENSMUSG00000001999.16	novel	772	7	NA	NA	1	423	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGAGTCGATTTTGA	2238	False	NA	NA	False	NA	NA	NA	126912613	126932692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
Isoform_44364_19	chr2	+	1123	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	30	7	4	-7	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAACGAGAATAGTGTT	2241	False	NA	NA	False	AATAAA	-13	NA	126912616	126938997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
Isoform_44368_64	chr2	+	6743	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-6	8	-6	-8	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTATATGTCCTTAAC	NA	False	NA	7	True	AATAAA	-9	NA	127050312	127082363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
Isoform_4437_12	chr10	-	485	1	FSM	ENSMUSG00000069682.7	ENSMUST00000168697.4	495	1	58	-48	49	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575228	29574743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29574700_29575200
Isoform_44376_44	chr2	+	4451	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	13	347	13	-347	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2347	False	NA	8	True	AATAAA	-21	NA	127089840	127102680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
Isoform_44379_9	chr2	+	4103	3	FSM	ENSMUSG00000034850.16	ENSMUST00000174288.2	842	3	-22	-3239	-18	-347	multi-exon	FALSE	canonical	2	7	junction_1	67.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2377	False	NA	8	True	AATAAA	-21	NA	127089870	127102680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127090005_127097924_127098090_127098876
Isoform_4438_4	chr6	+	172	1	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	148870118	148870290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_148870100_148870300
Isoform_44380_10	chr2	+	4815	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	-5	-347	intron_retention	FALSE	canonical	3	85	junction_1	28.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGTAGTCTTCCTG	2390	False	NA	8	True	AATAAA	-21	NA	127089883	127102680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127090730_127097924_127098090_127098876
Isoform_44381_244	chr2	+	3119	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	0	-3	0	3	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTGTTCATTTCTGGC	NA	False	NA	12	True	AATAAA	-19	NA	127112148	127140855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
Isoform_44385_5	chr2	+	3212	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	5	-1	intron_retention	FALSE	canonical	2	6	junction_2	129.050852182307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAGAGTGTTCATTTC	NA	False	NA	8	True	AATAAA	-15	NA	127112142	127140851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127112801_127126014_127126224_127126360_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
Isoform_44387_63	chr2	+	2644	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.2349702772765	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4983	False	NA	13	True	AATAAA	-24	NA	127267100	127278011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44388_21	chr2	+	2641	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.983674953575	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4983	False	NA	13	True	AATAAA	-24	NA	127267100	127278011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44389_24	chr2	+	2647	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.4496247056154	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4983	False	NA	13	True	AATAAA	-24	NA	127267100	127278011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44390_6	chr2	+	2672	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-46	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.2156575944766	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4955	False	NA	13	True	AATAAA	-24	NA	127267072	127278011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269161_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44391_22	chr2	+	2630	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4984	False	NA	11	True	AATAAA	-22	NA	127267101	127278009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44392_6	chr2	+	2753	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-17	120	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGCAACTCTGAGAGAAAA	4984	False	NA	NA	False	ACTAAA	-17	NA	127267101	127278132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44393_5	chr2	+	2649	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	56.7243004232172	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4962	False	NA	11	True	AATAAA	-22	NA	127267079	127278009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44394_7	chr2	+	2631	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	57.181931085181	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAGTACATGTCCAA	4988	False	NA	13	True	AATAAA	-24	NA	127267105	127278011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44395_5	chr2	+	2622	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	63.6951711665176	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4992	False	NA	11	True	AATAAA	-22	NA	127267109	127278009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
Isoform_44400_524	chr2	+	1447	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	189	2845	-8	129	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4156	False	NA	25	True	AATAAA	-22	NA	127429330	127445904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_44401_73	chr2	+	1630	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	6	2845	6	129	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	3973	False	NA	25	True	AATAAA	-22	NA	127429147	127445904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_44402_11	chr2	+	4290	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	190	1	-7	-1	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTTCCAATAACTTGG	4157	False	NA	6	True	AATAAA	-17	NA	127429331	127448748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_44409_8	chr2	+	1500	12	NIC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-87	129	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	7099	False	NA	25	True	AATAAA	-22	NA	127432273	127445904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_4441_13	chr10	+	224	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AAAAAG	-27	NA	33254323	33254547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_33254300_33254500
Isoform_44412_16	chr2	+	2774	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-82	5	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACACAGGCGGAAATGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	127680713	127965798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
Isoform_44413_4	chr2	+	2418	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-108	-12	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	127680687	127965416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
Isoform_44414_3	chr2	+	2088	4	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	19	1152	intron_retention	FALSE	canonical	3	31	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGATGTCTGCCTGCTTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	127969513	128001514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127969733_127970539_127970935_127989004_127989115_128000150
Isoform_44417_11	chr2	+	4614	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	8	-2522	8	0	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660230	128696181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
Isoform_44420_6	chr2	+	564	2	ISM	ENSMUSG00000042851.18	ENSMUST00000110319.3	1484	4	-17	2921	-10	-2921	5prime_fragment	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAAGAAAGAAAGA	6922	False	NA	NA	False	NA	NA	NA	128809311	128833129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_128809757_128833010
Isoform_44421_4	chr2	+	1832	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	39	6499	-4	3	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTCAGTCCTCCATC	NA	False	NA	NA	False	ATTAAA	-17	NA	128907900	128931704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
Isoform_44424_3	chr2	+	4528	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	39	0	-4	0	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGGTCCTCTTAC	NA	False	NA	29	True	ATTAAA	-23	NA	128907900	128938203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
Isoform_44425_287	chr2	+	3967	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	32	-1	0	1	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942946	128968515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
Isoform_44427_4	chr2	+	2842	3	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	114	1077	10	-423	5prime_fragment	FALSE	canonical	3	556	junction_1	69.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAACAA	3939	False	NA	NA	False	NA	NA	NA	128971733	128974977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_128971778_128972097_128972239_128972320
Isoform_44428_152	chr2	+	1185	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	116	24	12	-24	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGGCTTGGAGACCT	3941	False	NA	21	True	NA	NA	NA	128971735	128976030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_44430_29	chr2	+	1214	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	87	24	-17	-24	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGGCTTGGAGACCT	3912	False	NA	21	True	NA	NA	NA	128971706	128976030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_44433_7	chr2	+	1355	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	-32	2	-32	-2	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTAGGTTTGTGTG	3793	False	NA	43	True	NA	NA	NA	128971587	128976052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
Isoform_44434_6	chr2	+	3328	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	2	1	intron_retention	FALSE	canonical	2	9	junction_6	191.197833591932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040724	129053530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046225_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_44435_268	chr2	+	3274	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	37	5	0	2	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCTTGTGCTTTT	NA	False	NA	17	True	AATAAA	-19	NA	129040720	129053531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_44436_11	chr2	+	3370	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	-59	5	-59	2	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCTTGTGCTTTT	NA	False	NA	17	True	AATAAA	-19	NA	129040624	129053531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
Isoform_4444_239	chr10	+	2675	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	22	389	22	-389	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTTTTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-18	NA	34158207	34160882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_34158200_34160900
Isoform_44440_3	chr2	+	3727	10	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.5317765318078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129434768	129474147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_129434813_129435523_129435615_129450052_129450154_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44441_14	chr2	+	3644	9	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.9934888767546	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129434750	129474147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44442_3	chr2	+	3933	10	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.5317765318078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGGGGTGTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	129434744	129474146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_129434996_129435523_129435615_129450052_129450154_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44443_9	chr2	+	3789	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	27	-4	1	-4	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129434785	129474144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44444_14	chr2	+	4063	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-83	2	-73	-2	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGGGGTGTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	129435041	129474146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44446_20	chr2	+	3588	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	393	1	-15	-1	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGGGGTGTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	129435517	129474147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44450_3	chr2	+	3593	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	48	3	-10	-3	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129435522	129474145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
Isoform_44451_3	chr2	+	3946	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	-306	4	44	-4	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129435168	129474144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
Isoform_44452_13	chr2	+	2942	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-25	-2041	20	-3	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129435507	129474145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44453_6	chr2	+	3127	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-211	-2040	-153	-4	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129435321	129474144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44455_3	chr2	+	3417	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-501	-2040	-83	-4	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129435031	129474144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
Isoform_44456_3	chr2	+	2049	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-162	995	-162	-995	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGACAGGCACCTT	6069	False	NA	NA	False	ATTAAA	-30	NA	129642274	129669899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_44457_18	chr2	+	1958	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-57	981	-57	-981	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTTATTGTTTTTGT	6174	False	NA	NA	False	ATTAAA	-44	NA	129642379	129669913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_44458_3	chr2	+	6248	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-57	-3309	-57	-4	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGTTTTGTGATT	6174	False	NA	30	True	AATAAA	-37	NA	129642379	129674203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_44459_3	chr2	+	2003	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-36	915	-36	-915	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATATAGTCACTGTT	6195	False	NA	NA	False	NA	NA	NA	129642400	129669979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
Isoform_44461_12	chr2	+	1187	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-42	4300	-42	-987	multi-exon	FALSE	canonical	3	29	junction_2	55	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCACCTTTTTATTGT	6189	False	NA	NA	False	ATTAAA	-38	NA	129642394	129669907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129669693
Isoform_44462_4	chr2	+	5485	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-46	6	-46	-6	multi-exon	FALSE	canonical	3	29	junction_2	55	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGAGTGTTTTGTGA	6185	False	NA	28	True	AATAAA	-35	NA	129642390	129674201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_129642767_129643323_129643925_129669693
Isoform_44474_67	chr2	+	2340	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
Isoform_44479_22	chr2	+	1978	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTATTTTGTTTAT	NA	False	NA	29	True	AATAAA	-18	NA	130116365	130121231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
Isoform_4448_6	chr10	+	3869	1	FSM	ENSMUSG00000039485.9	ENSMUST00000047935.8	3879	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTCTGGGTGAATGTA	NA	False	NA	NA	False	AATAAA	-8	NA	34173448	34177317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_34173400_34177300
Isoform_44481_20	chr2	+	2014	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
Isoform_44484_457	chr2	+	1855	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	6	0	0	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
Isoform_4449_134	chr10	-	3202	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	1	15	1	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	35587887	35584685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_35584700_35587900
Isoform_44515_24	chr2	+	2888	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	268.766511120712	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075
Isoform_44521_22	chr2	+	2282	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	253.395508939321	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
Isoform_4453_7	chr14	+	177	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATTATGAAACAT	3321	False	NA	NA	False	NA	NA	NA	52431262	52431439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_52431300_52431400
Isoform_4454_6	chr10	-	795	1	ISM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	3309	1442	3309	-1442	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTGTGTTTTTTTATG	NA	False	NA	NA	False	AATAAA	-19	NA	37011607	37010812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_37010800_37011600
Isoform_44544_415	chr2	+	2633	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-10	538	-10	-3	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266274	130285651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_44545_23	chr2	+	2624	24	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107.960872979603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266274	130285651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_44546_25	chr2	+	2724	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-7	2	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTATGCTGTCTGGC	NA	False	NA	23	True	AATAAA	-23	NA	130266277	130285656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_44547_5	chr2	+	2831	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_14	87.4865976130331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266269	130285651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_44548_6	chr2	+	2740	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	154	junction_14	56.5337060288406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266273	130285648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
Isoform_4455_5	chr10	-	1337	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	39379303	39377966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_39378000_39379300
Isoform_44556_76	chr2	+	2909	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	4	2412	4	-311	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGCCAGATTGTTCCT	NA	False	NA	26	True	ATTAAA	-44	NA	130292201	130395632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
Isoform_44557_16	chr2	+	3233	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	-8	2100	-8	1	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCGGTCCCTTTGTCTT	NA	False	NA	13	True	AATAAA	-21	NA	130292189	130395944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
Isoform_44559_355	chr2	+	977	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	3301	0	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
Isoform_44561_50	chr2	+	1057	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	21	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130405911_130406000_130406352_130406857
Isoform_44562_446	chr2	+	1156	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	234	0	18	0	multi-exon	TRUE	canonical	3	338	junction_5	87.1842992792643	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5469	False	NA	18	True	AATAAA	-18	NA	130509763	130523534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
Isoform_44564_3	chr2	+	5132	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-29	3642	-29	-3642	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTATAGAAACTTGAT	NA	False	NA	10	True	TATAAA	-16	NA	130748385	130868611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
Isoform_44565_9	chr2	+	3148	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	-58	-1	-58	-1	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028810	131040416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_44566_39	chr2	+	3088	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	2	-1	2	-1	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028870	131040416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_44568_31	chr2	+	3003	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	0	1	0	-1	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTGTTTGTTATGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	131028877	131040416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
Isoform_4457_6	chr10	+	2443	1	Genic_Genomic	ENSMUSG00000038481.14	novel	NA	NA	NA	NA	-18	-129136	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	CATAAA	-36	NA	40225285	40227728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_40225300_40227700
Isoform_44571_22	chr2	+	1585	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-67	3	3	0	multi-exon	FALSE	canonical	3	39	junction_2	10	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTGTCCTCTTTTTGT	NA	False	NA	8	True	ATTAAA	-14	NA	131052292	131055431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131052602_131053182_131053394_131054366
Isoform_44572_21	chr2	+	1347	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	32	-511	5	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	False	NA	10	True	ATTAAA	-16	NA	131052321	131055433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131052602_131054366
Isoform_44573_3	chr2	+	3330	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	13	-2475	13	1963	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCACAGTGTCTTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	131052302	131057397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131052602_131054366
Isoform_44574_226	chr2	+	2848	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	17	2	17	1	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	7281	False	NA	12	True	ATTAAA	-17	NA	131076003	131089943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_44575_7	chr2	+	2675	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	72.2744768227346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCTTGTGAGTTCCAA	7273	False	NA	9	True	ATTAAA	-14	NA	131075995	131089940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131076048_131080655_131080831_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_44576_16	chr2	+	3055	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	0	2	0	1	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGAGTTCCAAATT	7302	False	NA	12	True	ATTAAA	-17	NA	131076024	131089943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
Isoform_44579_22	chr2	+	751	2	ISM	ENSMUSG00000037514.19	ENSMUST00000131779.8	1304	5	0	9097	0	-9097	5prime_fragment	FALSE	canonical	3	620	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCATTTCTAATGGAGCT	864	False	NA	2	True	ATTAAA	-14	NA	131104414	131116260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_131104736_131115830
Isoform_44580_13	chr2	+	1632	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-30	-204	0	1	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44581_4	chr2	+	2537	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-30	-1109	0	906	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGGGTTTGTTTCAGA	864	False	NA	NA	False	CATAAA	-1	NA	131104414	131139517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44582_4	chr2	+	1379	6	NIC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	215.37817902471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGGTCATCTTTCT	864	False	NA	15	True	NA	NA	NA	131104414	131138613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44584_10	chr2	+	1201	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-73	2494	0	1	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
Isoform_44585_5	chr2	+	3698	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-78	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTGTTTGCTTGCA	859	False	NA	1	True	AATAAA	-15	NA	131104409	131141104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
Isoform_44586_4	chr2	+	1054	4	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	277.441084837043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	887	False	NA	14	True	NA	NA	NA	131104437	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131104736_131115830_131116041_131135318_131135445_131138192
Isoform_44587_4	chr2	+	1304	5	FSM	ENSMUSG00000037514.19	ENSMUST00000131779.8	1304	5	1	-1	1	1	multi-exon	FALSE	canonical	2	6	junction_4	223.522929472571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTGGCTGTTGTGAA	865	False	NA	NA	False	NA	NA	NA	131104415	131125358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131125158
Isoform_44588_25	chr2	+	4269	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-5	2	0	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	864	False	NA	3	True	AATAAA	-17	NA	131104414	131141106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44589_134	chr2	+	1775	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-5	2496	0	1	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44592_6	chr2	+	1519	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGGAGGTCATCTT	864	False	NA	12	True	NA	NA	NA	131104414	131138610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
Isoform_44594_19	chr2	+	1344	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
Isoform_44596_6	chr2	+	3716	4	FSM	ENSMUSG00000086329.2_ENSMUSG00000037514.19	ENSMUST00000145904.2	558	4	-301	-2857	0	0	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
Isoform_44597_10	chr2	+	1220	4	FSM	ENSMUSG00000037514.19	ENSMUST00000145904.2	558	4	-301	-361	0	1	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
Isoform_44599_3	chr2	+	1704	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	-90	3	-20	-3	multi-exon	FALSE	canonical	3	8	junction_5	45.6709616134134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACGCTCCTTTGCTTCT	NA	False	NA	12	True	AATAAA	-13	NA	131333822	131367084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366662
Isoform_4460_3	chr10	-	541	1	Genic_Genomic	ENSMUSG00000019813.17	novel	NA	NA	NA	NA	-18	-7905	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	108	False	NA	NA	False	NA	NA	NA	41685885	41685344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_41685300_41685900
Isoform_44600_26	chr2	+	2205	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-38	3	-18	2	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333824	131367089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
Isoform_44601_18	chr2	+	2248	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-59	-19	-39	8	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAAGGCTCTCTGTGTG	NA	False	NA	39	True	AATAAA	-40	NA	131333803	131367111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
Isoform_44602_82	chr2	+	2130	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	126	14	-33	2	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333809	131367089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
Isoform_44604_3	chr2	+	2009	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110189.9	1919	6	-98	8	-78	-3	multi-exon	FALSE	canonical	1	3	junction_5	55.41335579082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACGCTCCTTTGCTTCT	NA	False	NA	12	True	AATAAA	-13	NA	131333764	131367084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131366662
Isoform_44605_8	chr2	+	1373	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	-58	5	-38	0	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTCCTTTGCTTCTCTC	NA	False	NA	15	True	AATAAA	-16	NA	131333804	131367087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
Isoform_44606_4	chr2	+	2348	7	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	32	junction_5	50.3843560376962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCACGCTCCTTTGCTTC	NA	False	NA	11	True	AATAAA	-12	NA	131333818	131367083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366163_131366254_131366662
Isoform_44607_7	chr2	+	2254	6	FSM	ENSMUSG00000027333.19	ENSMUST00000151627.8	2223	6	-36	5	-16	0	multi-exon	FALSE	canonical	3	113	junction_5	11.7234807118023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTCCTTTGCTTCTCTC	NA	False	NA	15	True	AATAAA	-16	NA	131333826	131367087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366662
Isoform_44608_72	chr2	+	2137	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	46	1	32	-1	multi-exon	FALSE	canonical	3	54	junction_2	0.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCGGGGTTTGTTC	NA	False	NA	6	True	ATTAAA	-16	NA	131751893	131780348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131751924_131754114_131754213_131778339
Isoform_4461_5	chr10	-	293	1	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-14	-7908	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGGAAAAAAAAAAAAAAGAA	353	False	NA	NA	False	NA	NA	NA	41685640	41685347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41685300_41685600
Isoform_44610_3	chr2	+	1939	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	-1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792780	131798050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131792836_131794928_131795503_131796740
Isoform_44611_3	chr2	+	1929	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110169.2	1918	3	-14	3	-14	-3	multi-exon	FALSE	canonical	1	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCACGGTGTCTGGTGG	NA	False	NA	NA	False	NA	NA	NA	131792942	131798047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_131792991_131794928_131795503_131796740
Isoform_44612_4	chr2	+	1055	5	NNC	ENSMUSG00000058793.15	novel	1247	4	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	185.549184854043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTTTCTGAGCCCTT	5384	False	NA	NA	False	AATAAA	-12	NA	132105207	132138109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137723_132137770
Isoform_44614_13	chr2	+	1673	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	59	6664	-34	58	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	5303	False	NA	13	True	AATGAA	-15	NA	132105126	132147306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
Isoform_44616_20	chr2	+	1404	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	2	6667	2	55	multi-exon	FALSE	canonical	2	123	junction_1	89.520132744912	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCGTCATTTTTTTTT	NA	False	NA	10	True	AATGAA	-12	NA	132127860	132147303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
Isoform_44617_18	chr2	+	1044	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	32	0	32	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132528882	132592975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132528902_132533869_132534052_132592132
Isoform_4462_10	chr10	+	178	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5766384	5766562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_5766400_5766600
Isoform_44620_4	chr2	+	1169	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	1670	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTTGACTCAGTCTAT	NA	False	NA	24	True	NA	NA	NA	132533872	132592972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_132534052_132572619_132572770_132592132
Isoform_44621_3	chr2	+	1333	3	FSM	ENSMUSG00000027353.15	ENSMUST00000135685.2	735	3	-58	-540	25	540	multi-exon	FALSE	canonical	3	131	junction_1	25.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAGAAGAAAAAAAGA	NA	False	NA	NA	False	AGTAAA	-8	NA	132658085	132660485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132658386_132658993_132659166_132659624
Isoform_44624_8	chr2	+	3432	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	39	-292	39	-10	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	132658099	132686107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
Isoform_44629_5	chr2	+	3459	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	10	-290	10	-12	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	132658070	132686105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
Isoform_4463_299	chr10	-	2875	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-126	-1555	-126	1555	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	2336	False	NA	NA	False	ATTAAA	-15	NA	41931428	41928553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41928600_41931400
Isoform_44634_13	chr2	+	1889	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	36	-1	14	1	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTGTGGTGT	1658	False	NA	14	True	AATAAA	-29	NA	132688621	132708706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
Isoform_44638_3	chr2	+	2964	11	FSM	ENSMUSG00000074771.11	ENSMUST00000121717.2	2875	11	-91	2	-23	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAAGTGTCCTGGGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	136374108	136397883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_136374392_136375572_136375745_136379005_136379398_136386502_136386703_136387630_136387781_136388737_136388862_136391632_136392456_136394235_136394463_136395541_136395703_136396605_136396744_136397589
Isoform_44639_4	chr2	+	2829	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	89	2171	89	1	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTATGTTAC	NA	False	NA	NA	False	NA	NA	NA	136734176	136911699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
Isoform_44640_16	chr2	+	4589	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	68	0	-29	0	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTTTTTAGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	138098552	138129342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
Isoform_44642_4	chr2	+	4677	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	-21	1	-21	-1	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTTTTTTAGTATT	NA	False	NA	15	True	AATAAA	-16	NA	138098463	138129341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
Isoform_44644_11	chr2	+	1069	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	45	52	-19	5	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCCCAGAATTTTC	NA	False	NA	16	True	AATAAA	-16	NA	140012613	140045557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
Isoform_44645_35	chr2	+	1091	4	FSM	ENSMUSG00000068205.15	ENSMUST00000110062.8	3554	4	1	2462	1	-6	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTATGATTCCTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	140237350	140262409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
Isoform_44647_242	chr2	+	921	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	32	1108	10	-1108	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTATTGTCCTA	2020	False	NA	18	True	AATAAA	-18	NA	142904990	142913665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
Isoform_44648_7	chr2	+	1264	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	797	0	-797	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGCTTTTTTCAGA	1988	False	NA	16	True	AATAAA	-17	NA	142904958	142913976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
Isoform_44653_57	chr2	+	1736	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	173	2	173	-2	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTTTCTTTGTGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	143757412	143785242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_44654_709	chr2	+	1680	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	229	2	229	-2	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTTTCTTTGTGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	143757468	143785242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_44655_21	chr2	+	1925	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	-16	2	-16	-2	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTTTCTTTGTGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	143757223	143785242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
Isoform_44659_17	chr2	+	2056	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	251	1	14	-1	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112833	144122435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_4466_11	chr10	-	1627	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-168	-265	-168	265	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTTTCTCTGAGGAG	2294	False	NA	NA	False	NA	NA	NA	41931470	41929843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41929800_41931500
Isoform_44662_11	chr2	+	1105	3	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	119	4432	78	-3721	5prime_fragment	FALSE	canonical	3	360	junction_1	74	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	144112938	144118715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_144112993_144113834_144114405_144118234
Isoform_44665_50	chr2	+	2114	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	14	712	14	-1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTTCAGTGGAC	NA	False	NA	13	True	AATAAA	-15	NA	144112833	144122435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_44666_245	chr2	+	1991	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	135	714	94	-3	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTAGTCTTTCAGTGG	NA	False	NA	11	True	AATAAA	-13	NA	144112954	144122433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_44668_5	chr2	+	2816	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	25	-1	-16	1	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGTATTTATAGGGT	NA	False	NA	NA	False	AATAAA	-21	NA	144112844	144123148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_44669_10	chr2	+	2744	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	94	2	53	-2	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAGGTGTATTTATAG	NA	False	NA	NA	False	AATAAA	-18	NA	144112913	144123145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_44675_29	chr2	+	2250	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	107	2	107	-2	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGTCTTTCAGTGGA	NA	False	NA	12	True	AATAAA	-14	NA	144112967	144122434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
Isoform_44680_5	chr2	+	943	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	-23	-227	-23	227	multi-exon	FALSE	canonical	3	459	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCATCATTATTATTA	NA	False	NA	14	True	AATAAA	-15	NA	144210892	144215868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144211078_144215110
Isoform_44681_39	chr2	+	3276	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	2	21	2	-20	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210920	144249575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_44683_5	chr2	+	3810	11	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-20	intron_retention	FALSE	canonical	1	28	junction_5	120.788906775415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210893	144249575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_44684_199	chr2	+	3790	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-10	21	-10	-20	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210892	144249575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_44685_7	chr2	+	3160	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	116.355113324229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	17	True	AATAAA	-23	NA	144210920	144249573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
Isoform_44686_5	chr2	+	3631	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	3	-28	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACAGCCAGGGCTGCA	NA	False	NA	11	True	AATAAA	-17	NA	144210921	144249567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
Isoform_44689_5	chr2	+	2156	2	FSM	ENSMUSG00000027427.14	ENSMUST00000136999.2	2177	2	1	20	1	-20	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAATAATTAGA	622	False	NA	NA	False	NA	NA	NA	144369662	144372595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144369846_144370622
Isoform_44691_6	chr2	+	2382	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	31	1990	1	1111	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCTTTTTTCCATTT	628	False	NA	4	True	NA	NA	NA	144369668	144381925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
Isoform_44692_354	chr2	+	2724	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACTAATGCAGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144398200	144432657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
Isoform_44693_141	chr2	+	2742	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	25	12	0	-12	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACTAATGCAGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144398200	144432657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
Isoform_44696_77	chr2	+	450	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	13	8	13	-8	multi-exon	FALSE	canonical	3	228	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGCAACCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	144435986	144437278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144436126_144436967
Isoform_44697_204	chr2	+	1240	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	72	38	72	-38	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACTTTATTATTAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	144441888	144610640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
Isoform_44698_3	chr2	+	880	4	NIC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	86	-41	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	142.176728835004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTACTTTATTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	144441902	144610637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144442012_144445707_144445799_144588820_144588994_144610130
Isoform_44699_4	chr2	+	1131	5	NIC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	91	-37	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.50753868937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACTTTATTATTAAATT	NA	False	NA	NA	False	AATAAA	-24	NA	144441907	144610641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_144442012_144459111_144459348_144477677_144477785_144588820_144588994_144610130
Isoform_44700_4	chr2	+	577	5	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	19	670	-2	21	5prime_fragment	FALSE	canonical	3	961	junction_2	127.74681992128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTTTGCTATTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	145745179	145757675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453
Isoform_44701_221	chr2	+	1015	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	19	108	-2	-108	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTGGAAGTTTGTT	NA	False	NA	-44	True	AGTAAA	-17	NA	145745179	145758237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_44702_38	chr2	+	1123	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	19	0	-2	0	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745179	145758345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_44704_17	chr2	+	1045	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	19	108	-2	-108	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTGGAAGTTTGTT	NA	False	NA	-44	True	AGTAAA	-17	NA	145745179	145758237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
Isoform_44705_3	chr2	+	1168	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	-4	8	-4	-8	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGCACATCTGTAATCA	NA	False	NA	23	True	TATAAA	-8	NA	145745156	145758337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
Isoform_44706_4	chr2	+	965	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	-2	-109	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	539.338657524194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745179	145758236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_145745283_145753616_145753684_145754312_145754449_145757453_145757600_145757723
Isoform_44707_36	chr2	+	2170	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	6	7	6	-2	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGCGTCACTGTAAT	NA	False	NA	NA	False	AATAAA	-8	NA	146697789	146812010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
Isoform_4471_3	chr10	+	342	1	ISM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	51	70626	51	-50854	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCCGTCGGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	42637542	42637884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_42637500_42637900
Isoform_44718_272	chr2	+	3391	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	39	4	39	-4	multi-exon	TRUE	canonical	3	956	junction_9	74.1082057489866	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTGGTGTCTGGTGT	NA	False	NA	6	True	AATAAA	-18	NA	146854954	146919916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
Isoform_44724_28	chr2	+	1073	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	45	-2	20	2	multi-exon	FALSE	canonical	3	22	junction_1	28	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTAAATCTTGAGAAG	NA	False	NA	17	True	AATAAA	-21	NA	148514565	148517949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_148514756_148516383_148516519_148517201
Isoform_44727_591	chr2	+	932	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	23	1	23	-1	multi-exon	FALSE	canonical	3	586	junction_1	0	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATGTCTAAATCTTGAG	NA	False	NA	14	True	AATAAA	-18	NA	148514568	148517946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_148514756_148517201
Isoform_4473_5	chr10	+	1990	1	NIC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	28	-49110	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42637638	42639628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_42637600_42639600
Isoform_44731_27	chr2	+	4074	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	157	1	-31	-1	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTCTGCTTTGTAAAA	528	False	NA	NA	False	AATAAA	-17	NA	148523099	148534868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
Isoform_44732_5	chr2	+	4078	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	26.4423902096615	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTCTGCTTTGTAA	512	False	NA	NA	False	AATAAA	-15	NA	148523083	148534866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_148523136_148525523_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
Isoform_44734_10	chr2	+	1996	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	0	54	0	-54	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTTTGCTTACGACT	NA	False	NA	NA	False	NA	NA	NA	149672707	149846258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
Isoform_44736_4	chr2	+	739	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	2	987	2	-860	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAAAACCCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	150023676	150034212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
Isoform_44737_12	chr2	+	354	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	27	2637	27	-2637	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAAAATTCATA	NA	False	NA	NA	False	NA	NA	NA	150099463	150109583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
Isoform_44738_8	chr2	+	2094	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	40	25	40	-25	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	150153390	150168907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
Isoform_4474_46	chr10	+	534	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	1	28	1	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	43400080	43400614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_43400100_43400600
Isoform_44740_125	chr2	+	2498	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	39	3	0	-3	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTGCCTCATTA	NA	False	NA	9	True	AATAAA	-14	NA	150591000	150613592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_44742_7	chr2	+	2590	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	44.6562147387449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150590974	150613593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612483
Isoform_44743_4	chr2	+	2466	13	NIC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.8365953786851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGCCTCATTAGTGA	NA	False	NA	13	True	AATAAA	-18	NA	150591000	150613596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_44744_34	chr2	+	2496	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	38.7806759662898	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150591000	150613593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_150591154_150594932_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
Isoform_44745_123	chr2	+	3874	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	28	7	28	-7	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCACTGTGGTATCTGC	NA	False	NA	16	True	ATTAAA	-16	NA	150628682	150673671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
Isoform_44748_177	chr2	+	1086	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	0	1	0	-1	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAATCTCCTGGTAGCT	2422	False	NA	22	True	AATAAA	-29	NA	150751513	150773199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
Isoform_4475_4	chr10	+	4872	1	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTTAAAAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	44317246	44322118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_+_44317200_44322100
Isoform_44751_468	chr2	+	1360	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	2	2	2	-2	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTACCAATTCTGTTAT	NA	False	NA	17	True	NA	NA	NA	151336214	151353223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
Isoform_44752_26	chr2	+	1465	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	-103	2	1	-2	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTACCAATTCTGTTAT	NA	False	NA	17	True	NA	NA	NA	151336109	151353223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
Isoform_44756_18	chr2	+	1597	5	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	1013.2641252408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384458	151403611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401537_151402540
Isoform_44759_640	chr2	+	1555	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	102	1	0	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384504	151403611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
Isoform_44762_31	chr2	+	1644	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	13	1	13	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384415	151403611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
Isoform_44766_36	chr2	+	2692	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-23	0	1	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151838431	151851178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_44767_93	chr2	+	2420	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-21	270	3	-234	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGCTGTGTACACACA	NA	False	NA	15	True	ATTAAA	-19	NA	151838433	151850908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_44769_134	chr2	+	2325	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	29	236	-3	-236	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGGCTGTGTACACA	NA	False	NA	13	True	ATTAAA	-17	NA	151841813	151850906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_44771_45	chr2	+	2597	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	29	-36	-3	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151841813	151851178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_44772_18	chr2	+	2625	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	1	-36	1	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151841785	151851178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
Isoform_44775_9	chr2	+	2411	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	188	-2153	180	-12	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGCCTTAGCCCAACA	NA	False	NA	19	True	NA	NA	NA	151947623	151953284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151947659_151950908
Isoform_44777_6	chr2	+	2523	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	70	-2147	62	-18	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGCAATAGCCTTAGC	NA	False	NA	13	True	NA	NA	NA	151947505	151953278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151947659_151950908
Isoform_44778_268	chr2	+	2585	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	21	206	-21	multi-exon	FALSE	canonical	3	134	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACCATGCAATAGCCTT	NA	False	NA	10	True	NA	NA	NA	151947649	151953275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151947868_151950908
Isoform_44784_71	chr2	+	979	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	-5	6	-5	-6	multi-exon	FALSE	canonical	3	131	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGGTGTGTATCCTG	7084	False	NA	NA	False	AATAAA	-11	NA	151985475	151991011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_151986059_151990615
Isoform_44785_33	chr2	+	468	3	ISM	ENSMUSG00000074698.11	ENSMUST00000124791.8	600	6	-50	6508	7	1479	5prime_fragment	FALSE	canonical	2	55	junction_1	19	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAGTATAAGAAAAACAAT	NA	False	NA	NA	False	AAAAAG	-21	NA	152068765	152096241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_152068912_152092321_152092532_152096129
Isoform_44787_7	chr2	+	1359	9	FSM	ENSMUSG00000074698.11	ENSMUST00000136063.2	1559	9	-3	203	-3	-203	multi-exon	FALSE	canonical	2	55	junction_1	38.0195262332397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAATTAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	152068792	152115057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547
Isoform_44788_95	chr2	+	4161	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	34	11	-3	-11	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATGAAATGTCCATGC	NA	False	NA	8	True	AATAAA	-9	NA	152068792	152123761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_44795_3	chr2	+	4233	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	43	-70	6	70	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGATTTGAACTTAATACG	NA	False	NA	4	True	AATAAA	-18	NA	152068801	152123842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_44796_3	chr2	+	4202	13	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-3	-11	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	43.5398923083443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATGAAATGTCCATGC	NA	False	NA	8	True	AATAAA	-9	NA	152068792	152123761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152068953_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
Isoform_44797_197	chr2	+	3350	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	33	3	10	-3	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135780	152155913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
Isoform_448_59	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6001_+_0_6000
Isoform_4480_7	chr10	-	776	1	NIC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-7	-20353	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	GATAAA	-26	NA	53506062	53505286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_53505300_53506100
Isoform_44800_3	chr2	+	3210	7	NIC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	61.8411944688436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135778	152155913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152153236_152153425_152153629
Isoform_44801_5	chr2	+	3519	7	FSM	ENSMUSG00000027465.14	ENSMUST00000140482.2	3496	7	-26	3	-5	-3	multi-exon	FALSE	canonical	3	150	junction_1	23.7323033484368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135765	152155913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153236_152153425_152153629
Isoform_44802_4	chr2	+	2782	3	FSM	ENSMUSG00000019188.17	ENSMUST00000148156.2	2769	3	-13	0	12	0	multi-exon	FALSE	canonical	3	150	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGAGGTGTGTTTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	152511392	152525361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152511685_152519461_152519561_152522970
Isoform_44804_7	chr2	+	1779	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	-20	-16	7	16	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152511387	152546972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
Isoform_44805_4	chr2	+	3339	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	19	1846	-6	1788	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152511399	152548744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
Isoform_44806_75	chr2	+	1559	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	27	3618	0	16	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152511407	152546972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
Isoform_44807_93	chr2	+	929	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	4	1	4	-1	multi-exon	FALSE	canonical	3	30	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGTGACTTCTTGG	4426	False	NA	12	True	ATTAAA	-16	NA	152578174	152579329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152578666_152578891
Isoform_44808_3	chr2	+	720	5	FSM	ENSMUSG00000009876.14	ENSMUST00000010020.12	727	5	-1	8	-1	-5	multi-exon	FALSE	canonical	2	9	junction_4	3.69966214673719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTCCCCTTTGGACTA	NA	False	NA	NA	False	AATAAA	-23	NA	152596091	152606949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152596145_152597074_152597160_152598929_152599095_152602557_152602690_152606664
Isoform_4481_9	chr10	-	178	1	Antisense	novelGene_ENSMUSG00000112824.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53940908	53940730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_-_53940700_53940900
Isoform_44814_96	chr2	+	2814	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	33	636	16	-636	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2741	False	NA	17	True	AATAAA	-16	NA	152689930	152735938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44815_163	chr2	+	2781	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	66	636	-38	-636	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2774	False	NA	17	True	AATAAA	-16	NA	152689963	152735938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44816_14	chr2	+	4134	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	20	-671	3	4	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2728	False	NA	17	True	NA	NA	NA	152689917	152737245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44819_43	chr2	+	2813	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	46	1302	15	-635	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2740	False	NA	18	True	AATAAA	-17	NA	152689929	152735939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44824_54	chr2	+	2797	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-38	-633	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCAGTCACAGTGT	2774	False	NA	20	True	AATAAA	-19	NA	152689963	152735941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44826_23	chr2	+	2835	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	8	-636	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2733	False	NA	17	True	AATAAA	-16	NA	152689922	152735938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44827_10	chr2	+	2792	18	NIC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-38	-635	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	194.571999464924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2774	False	NA	18	True	AATAAA	-17	NA	152689963	152735939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152690030_152696840_152696936_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_4483_13	chr10	+	1747	1	ISM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	8211	6	213	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTATAAAGCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55991223	55992970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_+_55991200_55993000
Isoform_44830_76	chr2	+	2977	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	39	638	39	-638	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2764	False	NA	15	True	AATAAA	-14	NA	152689953	152735936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44832_16	chr2	+	2956	18	NIC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	-29	-637	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	218.393996520653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGTTTCAGTCACA	2783	False	NA	16	True	AATAAA	-15	NA	152689972	152735937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152690218_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44834_18	chr2	+	2995	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	69	1301	38	-634	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTTCAGTCACAGTG	2763	False	NA	19	True	AATAAA	-18	NA	152689952	152735940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
Isoform_44837_97	chr2	+	2071	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	12	7	12	-7	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCAAGGGTCAGCTTC	NA	False	NA	10	True	AATAAA	-20	NA	152950399	152993352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
Isoform_44838_11	chr2	+	3667	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	123.527310906505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATGCAAGGGTGCGGAT	NA	False	NA	36	True	AATAAA	-25	NA	153003449	153052381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_44843_249	chr2	+	3654	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	241	1	3	-1	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGGGTGCGGATTGAA	NA	False	NA	40	True	AATAAA	-29	NA	153003463	153052385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_44845_15	chr2	+	3887	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	1	8	1	-8	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	33	True	AATAAA	-22	NA	153003223	153052378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
Isoform_4485_3	chr5	-	177	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTAAAAAAAAAAAAAAAT	4605	False	NA	NA	False	NA	NA	NA	108656197	108656020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_108656000_108656200
Isoform_44850_9	chr2	+	5617	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	16	2	16	-2	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCCTTGTCAGTG	7829	False	NA	8	True	AATAAA	-27	NA	153133348	153175308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
Isoform_44855_3	chr2	+	4130	22	FSM	ENSMUSG00000027478.16	ENSMUST00000088976.12	4130	22	-4	4	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.8880983888474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491369	153529646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_44863_3	chr2	+	4015	21	FSM	ENSMUSG00000027478.16	ENSMUST00000109772.8	4015	21	-4	4	0	0	multi-exon	FALSE	canonical	3	33	junction_15	23.6207535866238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491369	153529646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
Isoform_44865_122	chr2	+	2574	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	14	4748	14	-4748	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583207	153610482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
Isoform_44877_6	chr2	+	884	6	ISM	ENSMUSG00000074665.12	ENSMUST00000099181.2	1479	13	10146	3	10146	-3	3prime_fragment	FALSE	canonical	2	5	junction_4	2.13541565040626	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGGGGTGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	153795988	153805769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_153796354_153799049_153799118_153799638_153799682_153801569_153801634_153803435_153803513_153805502
Isoform_44878_6	chr2	+	1622	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	12	3	12	-3	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGTGTCTGAGTTTG	NA	False	NA	2	True	AATAAA	-12	NA	154065673	154082819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
Isoform_44879_5	chr2	+	1544	8	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	0	2117	0	-2117	5prime_fragment	FALSE	canonical	3	494	junction_7	35.6026827698161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACTACACTTATTTAGT	5306	False	NA	NA	False	NA	NA	NA	154278403	154366216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
Isoform_4488_4	chr10	-	205	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56514084	56513879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_56513900_56514100
Isoform_44880_5	chr2	+	3652	8	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	10	-1	-1	1	intron_retention	FALSE	canonical	3	494	junction_7	35.6026827698161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTCTGATTTAAATTGT	5316	False	NA	NA	False	ATTAAA	-16	NA	154278413	154368334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
Isoform_44881_9	chr2	+	1804	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-20	7756	-6	1	5prime_fragment	FALSE	canonical	3	422	junction_9	51.6952131413383	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTCTACCACACACAC	5297	False	NA	13	True	AATAAA	-18	NA	154278394	154373520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
Isoform_44882_158	chr2	+	2495	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	1	3573	1	819	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5318	False	NA	NA	False	ATTAAA	-17	NA	154278415	154377703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_44884_7	chr2	+	6114	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-53	8	-39	-8	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAAGCTGGACCAGAC	5264	False	NA	29	True	AATAAA	-19	NA	154278361	154381268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_44886_16	chr2	+	2562	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-66	3573	-52	819	multi-exon	TRUE	canonical	3	422	junction_9	50.3348785634772	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5251	False	NA	NA	False	ATTAAA	-17	NA	154278348	154377703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_44887_33	chr2	+	6070	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-2	1	-2	-1	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGACCAGACCTGGGGA	5315	False	NA	36	True	AATAAA	-26	NA	154278412	154381275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_4489_6	chr10	-	180	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATCAAACTACA	NA	False	NA	NA	False	NA	NA	NA	3885556	3885376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_3885400_3885600
Isoform_44890_4	chr2	+	1815	10	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	-20	7756	-20	1	5prime_fragment	FALSE	canonical	3	122	junction_9	133.715378581283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTCTACCACACACAC	5283	False	NA	13	True	AATAAA	-18	NA	154278380	154373520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
Isoform_44892_34	chr2	+	2516	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	-9	3573	-9	819	multi-exon	FALSE	canonical	3	122	junction_9	126.860553364708	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5294	False	NA	NA	False	ATTAAA	-17	NA	154278391	154377703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
Isoform_44893_10	chr2	+	6074	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	-5	11	-5	-11	multi-exon	FALSE	canonical	3	122	junction_9	126.860553364708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCAAGCTGGACCA	5298	False	NA	26	True	AATAAA	-16	NA	154278395	154381265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
Isoform_44895_11	chr2	+	2405	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-39	819	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5264	False	NA	NA	False	ATTAAA	-17	NA	154278361	154377703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
Isoform_44898_3	chr2	+	3256	15	FSM	ENSMUSG00000059842.13	ENSMUST00000081926.13	3299	15	24	19	24	-19	multi-exon	FALSE	canonical	2	3	junction_5	3.22062866217014	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTCCAAACCACCCAG	5746	False	NA	6	True	AATAAA	-16	NA	154455240	154488722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
Isoform_44900_14	chr2	+	1674	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	-61	3	-61	2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCTGTGTGTTCAGTC	NA	False	NA	27	True	ATTAAA	-19	NA	154498876	154536702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
Isoform_44901_125	chr2	+	1581	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	33	2	33	-2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCTGTGTGTTCAGTCA	NA	False	NA	28	True	ATTAAA	-20	NA	154498970	154536703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
Isoform_44908_36	chr2	+	1490	9	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.2965856472031	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154632997	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_4491_4	chr10	+	263	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGGCATCCAATGCCT	32	False	NA	NA	False	NA	NA	NA	58394420	58394683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_58394400_58394700
Isoform_44911_32	chr2	+	1407	8	NIC	ENSMUSG00000027593.16	novel	1709	8	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.0813776484863	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154632997	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_154633152_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_44917_269	chr2	+	1578	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	222	2	1	-2	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_44919_22	chr2	+	1826	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	-26	2	1	-2	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633026	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_4492_7	chr10	-	565	1	NIC	ENSMUSG00000019917.11	novel	1821	10	NA	NA	347	-54896	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	59057322	59056757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_59056800_59057300
Isoform_44921_1068	chr2	+	1530	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	198	19	1	-2	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_44922_80	chr2	+	1786	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	-58	19	3	-2	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633018	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_44927_74	chr2	+	1495	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	245	19	1	-2	multi-exon	FALSE	canonical	3	28	junction_3	53.4051437129421	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_44929_418	chr2	+	1447	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	259	3	1	-2	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTCTGAGGTGGAAT	NA	False	NA	4	True	AATAAA	-14	NA	154633274	154709162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
Isoform_4493_7	chr10	+	1834	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-91	2739	-91	-2739	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGGGGTGGATCTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	59057683	59059517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59057700_59059500
Isoform_44939_12	chr2	+	5353	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-49	5	1	-5	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCATTTGCCTTTTC	NA	False	NA	50	True	AATAAA	-10	NA	154975429	155068768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
Isoform_4494_6	chr10	+	2994	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-91	1579	-91	-1579	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATTCCATTCACTTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	59057683	59060677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59057700_59060700
Isoform_44940_19	chr2	+	5152	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	0	7	0	-5	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCATTTGCCTTTTC	NA	False	NA	50	True	AATAAA	-10	NA	154975428	155068768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
Isoform_44942_420	chr2	+	658	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	22	4	22	1	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078476	155092193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
Isoform_44943_6	chr2	+	730	4	FSM	ENSMUSG00000047459.15	ENSMUST00000135831.2	534	4	-3	-193	-3	1	multi-exon	FALSE	canonical	3	40	junction_1	796.677405785359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078727	155092193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155078861_155084650_155084727_155089690_155089859_155091840
Isoform_44945_352	chr2	+	957	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	154	1	-92	-1	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	10	True	AATAAA	-22	NA	155118370	155119992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
Isoform_44946_21	chr2	+	1063	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	48	1	48	-1	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	10	True	AATAAA	-22	NA	155118264	155119992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
Isoform_44947_6	chr2	+	813	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	17	-4	17	-1	multi-exon	FALSE	canonical	3	438	junction_2	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCCAGCTGCTTG	NA	False	NA	10	True	AATAAA	-22	NA	155118825	155119992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155118934_155119017_155119125_155119394
Isoform_44948_50	chr2	+	3951	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	18	10	-8	-10	multi-exon	FALSE	canonical	3	61	junction_1	13.490737563232	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACATTATGCTTTCTGC	4059	False	NA	-1	True	AATAAA	-11	NA	155223751	155231760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
Isoform_44949_7	chr2	+	3832	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	-2	-3090	-2	-3	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTCTGCCTCAGCT	4065	False	NA	6	True	AATAAA	-18	NA	155223757	155231767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
Isoform_4495_6	chr10	+	4573	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-93	2	-93	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGAGTGTCTGTGGT	NA	False	NA	3	True	AATAAA	-20	NA	59057681	59062254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59057700_59062300
Isoform_44950_3	chr2	+	3709	2	FSM	ENSMUSG00000027605.19	ENSMUST00000149788.2	3563	2	-18	-128	-18	128	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAAAATAAAATACAC	2074	False	NA	NA	False	NA	NA	NA	155359934	155367339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155360205_155363900
Isoform_44951_5	chr2	+	2873	19	FSM	ENSMUSG00000027605.19	ENSMUST00000103142.12	2145	19	-65	-663	9	-3	multi-exon	FALSE	canonical	1	2	junction_7	21.9854750030813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTTTTTTTAGGTAT	2101	False	NA	16	True	AATAAA	-20	NA	155359961	155404663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155393109_155393149_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
Isoform_44953_81	chr2	+	2818	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	112	1	3	-1	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTTTTTTAGGTATCT	2119	False	NA	18	True	AATAAA	-22	NA	155359979	155404665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
Isoform_44955_24	chr2	+	2541	14	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	18120	103	272	1	3prime_fragment	FALSE	canonical	3	44	junction_5	10.8850910469592	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155471251	155476124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_44957_3	chr2	+	2593	14	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	18168	3	320	-3	3prime_fragment	FALSE	canonical	3	44	junction_5	10.8850910469592	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCATTTAATCGGTTTA	NA	False	NA	112	True	AATAAA	-12	NA	155471299	155476224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
Isoform_44958_3	chr2	+	2520	6	NNC	ENSMUSG00000038241.17	novel	1254	8	NA	NA	-5	-984	intron_retention	FALSE	non_canonical	0	0	junction_3	21.4699790405114	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	155798472	155808730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805633_155805716_155806029_155806196_155806908
Isoform_44959_3	chr2	+	2313	15	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	7	7	intron_retention	FALSE	canonical	3	36	junction_1	11.1739492954435	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAGAGCTTAAAGATA	NA	False	NA	NA	False	GGGGCT	-36	NA	155798498	155816372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172
Isoform_4496_3	chr10	+	1113	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-123	-360	-123	360	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	1379	False	NA	NA	False	NA	NA	NA	59231453	59232566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_59231500_59232600
Isoform_44960_267	chr2	+	1312	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	64	1	3	1	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850028	155860198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_44963_4	chr2	+	1160	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850021	155860198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_44964_7	chr2	+	1183	11	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	457	1	-117	1	3prime_fragment	FALSE	canonical	3	758	junction_2	58.9983898085363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850421	155860198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
Isoform_44965_5	chr2	+	381	3	FSM	ENSMUSG00000067847.14	ENSMUST00000119950.2	379	3	-4	2	-1	-2	multi-exon	FALSE	canonical	3	37	junction_1	474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGTCTATTTTTACC	6548	False	NA	12	True	AATAAA	-17	NA	155986155	155987712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155986201_155986364_155986510_155987521
Isoform_44966_201	chr2	+	369	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	197	3	-1	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6548	False	NA	14	True	AATAAA	-19	NA	155986155	155987714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155986201_155986378_155986510_155987521
Isoform_44968_3	chr2	+	474	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	74	2	67	-2	multi-exon	FALSE	canonical	3	985	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGTCTATTTTTACC	6619	False	NA	12	True	AATAAA	-17	NA	155986226	155987712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_155986510_155987521
Isoform_44971_295	chr2	+	1721	11	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	99	17425	7	-1	5prime_fragment	FALSE	canonical	3	289	junction_1	26.5510828404417	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAGAA	NA	False	NA	NA	False	ACTAAA	-37	NA	156038660	156134447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
Isoform_44972_8	chr2	+	1811	11	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	7	17427	7	-3	5prime_fragment	FALSE	canonical	3	289	junction_1	26.5510828404417	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAGAAAAAGAAAAAG	NA	False	NA	NA	False	ACTAAA	-35	NA	156038568	156134445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
Isoform_44973_12	chr2	+	1667	10	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	98.616478727154	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAGAA	NA	False	NA	NA	False	ACTAAA	-37	NA	156038629	156134447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
Isoform_44979_14	chr2	+	3917	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	3	863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	42.3145443217462	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7787	False	NA	28	True	AATAAA	-38	NA	156262974	156382769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382315_156382340
Isoform_44980_52	chr2	+	3528	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	8	861	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTACCTGACTGTGAT	7792	False	NA	26	True	AATAAA	-36	NA	156262979	156382767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_44983_4	chr2	+	5861	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	35.2440149467844	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	7792	False	NA	9	True	AATAAA	-24	NA	156262979	156385130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_44985_6	chr2	+	3500	22	NNC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	9	861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	42.2942934240049	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTACCTGACTGTGAT	7793	False	NA	26	True	AATAAA	-36	NA	156262980	156382767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382341
Isoform_44986_8	chr2	+	3475	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-3	847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	41.4527570344801	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTCCAAGTTATAAT	7777	False	NA	12	True	AATAAA	-22	NA	156262964	156382753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382318_156382347
Isoform_44987_7	chr2	+	2796	5	NIC	ENSMUSG00000027628.11	novel	2766	5	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	64.3481740222673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCTGTGTGAGTCTCT	NA	False	NA	8	True	ATTAAA	-19	NA	156389507	156410077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156389804_156391771_156391948_156392568_156393370_156397746_156397977_156408784
Isoform_44989_23	chr2	+	2750	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	15	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCCCCTGTGTGAGTCT	NA	False	NA	6	True	ATTAAA	-17	NA	156389518	156410075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
Isoform_4499_10	chr7	-	204	1	Intergenic	novelGene_1765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAGGAGAGGAGA	2173	False	NA	NA	False	NA	NA	NA	18923608	18923404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_18923400_18923600
Isoform_44990_303	chr2	+	2609	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	3	815	3	1	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCTGTGTGAGTCTCT	NA	False	NA	8	True	ATTAAA	-19	NA	156389518	156410077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
Isoform_44992_4	chr2	+	2383	3	NIC	ENSMUSG00000027628.11	novel	3427	4	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCCCCTGTGTGAGTCT	NA	False	NA	6	True	ATTAAA	-17	NA	156389512	156410075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156389804_156392568_156393370_156408784
Isoform_44993_9	chr2	+	3637	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-56	1270	-56	-31	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156455568	156605013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_44994_17	chr2	+	3459	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-18	1410	-18	-2	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	NA	False	NA	9	True	ATTAAA	-12	NA	156455606	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_44997_135	chr2	+	1424	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	0	171	0	-2	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	NA	False	NA	9	True	ATTAAA	-12	NA	156562964	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_44998_50	chr2	+	1564	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	0	31	0	-31	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156562964	156605013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_4500_4	chr10	-	2130	1	ISM	ENSMUSG00000020099.9	ENSMUST00000077925.7	5869	17	66854	5	55914	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTCCTGGTCTGATGT	NA	False	NA	NA	False	AATAAA	-33	NA	60600506	60598376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_60598400_60600500
Isoform_45000_19	chr2	+	1507	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-83	171	-69	-2	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	NA	False	NA	9	True	ATTAAA	-12	NA	156562881	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45001_8	chr2	+	2406	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-414	1410	8	-2	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	NA	False	NA	9	True	ATTAAA	-12	NA	156562997	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45002_5	chr2	+	2544	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-415	1273	7	-34	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	156562996	156605010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45007_229	chr2	+	2847	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	49	4	-44	-4	multi-exon	FALSE	canonical	3	217	junction_2	7.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGAATTTTTTGTTGT	NA	False	NA	NA	False	AATAAA	-31	NA	156681975	156697486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156682159_156686075_156686302_156695048
Isoform_45009_18	chr2	+	2930	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	-26	-4	-26	4	multi-exon	FALSE	canonical	3	217	junction_2	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGTTGTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	156681900	156697494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156682159_156686075_156686302_156695048
Isoform_4501_3	chr10	-	179	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGACTTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	60918234	60918055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_60918100_60918200
Isoform_45011_43	chr2	+	2733	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-51	8	42	-8	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAACTGAATTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	156681968	156697482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
Isoform_45012_50	chr2	+	2670	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	18	2	18	-2	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	156682037	156697488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
Isoform_45013_9	chr2	+	2755	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-73	8	20	-8	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAACTGAATTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	156681946	156697482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
Isoform_45014_39	chr2	+	2784	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-55	-8	intron_retention	FALSE	canonical	3	38	junction_1	89.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAACTGAATTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	156682886	156697482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156683011_156686075_156686302_156695048
Isoform_45015_11	chr2	+	2677	4	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-62	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	80.6735534250365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAATTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-30	NA	156682879	156697485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156683011_156686075_156686302_156695048_156695149_156695265
Isoform_45017_743	chr2	+	1022	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	21	2	4	-2	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTGGCATGCCTGG	4663	False	NA	12	True	AATAAA	-16	NA	156705068	156715481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
Isoform_45019_47	chr2	+	1153	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-111	3	-111	-3	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	4531	False	NA	11	True	AATAAA	-15	NA	156704936	156715480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
Isoform_4502_6	chr10	+	177	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGCAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	61154746	61154923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_61154700_61154900
Isoform_45020_29	chr2	+	911	3	FSM	ENSMUSG00000027637.4	ENSMUST00000152551.2	765	3	17	-163	11	-2	multi-exon	FALSE	canonical	3	93	junction_1	636.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTGGCATGCCTGG	4670	False	NA	12	True	AATAAA	-16	NA	156705075	156715481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_156705338_156714257_156714388_156714962
Isoform_45025_876	chr2	+	2242	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	252	262	-115	1	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_45026_396	chr2	+	2521	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-27	262	15	1	multi-exon	TRUE	canonical	3	1870	junction_1	194.730412606121	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120951	157167977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_45027_723	chr2	+	2479	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	15	262	15	1	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120993	157167977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_45029_34	chr2	+	2509	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	249	-2	-118	2	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTTCTGTGATAAAAT	NA	False	NA	22	True	AATAAA	-19	NA	157121227	157168241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_4503_3	chr10	+	176	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	61232850	61233026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_61232800_61233000
Isoform_45030_23	chr2	+	2750	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	10	-4	10	4	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCTGTGATAAAATGC	NA	False	NA	24	True	AATAAA	-21	NA	157120988	157168243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
Isoform_45044_363	chr2	+	1092	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	15	0	15	0	multi-exon	FALSE	canonical	3	219	junction_1	136	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5232	False	NA	30	True	AATAAA	-17	NA	157209528	157238683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157209561_157220968_157221175_157237829
Isoform_45046_8	chr2	+	4003	15	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	47.6961043204467	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266186	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_157266335_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45047_4	chr2	+	4122	15	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	47.6961043204467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266067	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_157266335_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45048_5	chr2	+	3925	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	-38	0	-25	0	multi-exon	FALSE	canonical	3	8	junction_5	51.505696138329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266174	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45049_98	chr2	+	3887	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-5	24	-5	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266194	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45052_27	chr2	+	4008	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-126	24	38	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266073	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45053_7	chr2	+	3794	13	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	40.2881978858435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266210	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_157266335_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45054_12	chr2	+	4240	14	NIC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	52	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	36.0835650766253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCAGCAGTTTATTGG	NA	False	NA	11	True	ATTAAA	-17	NA	157266363	157313759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45058_206	chr2	+	1858	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	61	523	61	-523	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157579381	157733011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_45059_27	chr2	+	2392	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	61	-11	61	11	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGCGATGTGCTTCC	NA	False	NA	NA	False	GGGGCT	-36	NA	157579381	157733545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_45060_8	chr2	+	1959	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	-40	523	-40	-523	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157579280	157733011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
Isoform_45064_42	chr2	+	3624	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-228	887	-4	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870412	157919240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_4507_22	chr10	-	2175	1	NIC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	399	-22448	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAACAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62175922	62173747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62173700_62175900
Isoform_45070_37	chr2	+	3621	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	-7	890	-7	-890	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTGATGTTTCTTC	NA	False	NA	7	True	AATAAA	-18	NA	157870409	157919237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_45074_5	chr2	+	3583	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	21	-887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.4083740264434	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870448	157919240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157870966_157877915_157878046_157885327_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
Isoform_45075_7	chr2	+	1897	15	FSM	ENSMUSG00000016024.10	ENSMUST00000016168.9	2525	15	92	536	-27	-536	multi-exon	FALSE	canonical	1	2	junction_3	1.75691055374984	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAGCTGAACCTCTT	NA	False	NA	NA	False	NA	NA	NA	158148504	158174236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158148714_158150600_158150716_158151520_158151650_158155392_158155549_158156072_158156137_158159456_158159521_158161591_158161684_158162183_158162361_158163974_158164035_158166428_158166597_158167626_158167695_158168147_158168191_158169436_158169501_158170265_158170343_158173825
Isoform_45076_23	chr2	+	1322	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	-25	4567	-25	-12	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	158217532	158223498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
Isoform_45077_48	chr2	+	1222	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	75	4567	0	-12	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	158217632	158223498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
Isoform_45078_3	chr2	+	3146	2	ISM	ENSMUSG00000027652.16	ENSMUST00000150789.8	2332	3	25	4296	19	2856	5prime_fragment	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACCAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	158251820	158265676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_158252024_158262733
Isoform_45079_231	chr2	+	2363	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	34	5	34	-5	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466841	158481126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_45080_24	chr2	+	2611	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	29	-238	29	238	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTGTTCGTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	158466836	158481369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_45081_5	chr2	+	2378	9	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	0	-5	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	44.7960656754586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466807	158481126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478068_158478587_158478721_158480552
Isoform_45082_4	chr2	+	2948	8	FSM	ENSMUSG00000037761.17	ENSMUST00000142531.8	2970	8	34	-12	34	-1	multi-exon	FALSE	canonical	0	0	junction_4	38.2691861978394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGTGTGTGCCACTG	NA	False	NA	NA	False	TTTAAA	-25	NA	158466841	158481130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478068_158478587_158478721_158480552
Isoform_45083_24	chr2	+	2366	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	35	-5	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	10.0498756211209	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466842	158481126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_45084_7	chr2	+	2608	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	34	236	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	10.0498756211209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGTGTTCGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	158466841	158481367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
Isoform_45085_60	chr2	+	2266	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
Isoform_45087_6	chr2	+	2326	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-61	1	-61	-1	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	345	False	NA	7	True	AATAAA	-15	NA	158609951	158628556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
Isoform_45088_4	chr2	+	2479	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	130.561181911862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	406	False	NA	7	True	AATAAA	-15	NA	158610012	158628556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_158610508_158621764_158622147_158625052_158625178_158627079
Isoform_45089_5	chr2	+	3241	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	3	5	0	-5	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACATGTTTCTCCTGTC	NA	False	NA	23	True	AGTAAA	-14	NA	158636784	158700129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_4509_4	chr4	+	206	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACATTAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	117009198	117009404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_117009200_117009400
Isoform_45090_79	chr2	+	3208	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	74	2	-4	-2	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	NA	False	NA	26	True	AGTAAA	-17	NA	158636800	158700132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_45091_12	chr2	+	3238	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	44	2	-11	-2	multi-exon	TRUE	canonical	3	62	junction_9	12.5862106454921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	NA	False	NA	26	True	AGTAAA	-17	NA	158636770	158700132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_45092_5	chr2	+	4601	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	73	-1390	-5	1390	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTCAGCCAGCCAATTA	NA	False	NA	NA	False	AATAAA	-12	NA	158636799	158701524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
Isoform_45100_11	chr2	+	1228	11	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	88	19077	-4	8	5prime_fragment	FALSE	canonical	3	359	junction_7	35.6084259691439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGTATGATCGTCTG	NA	False	NA	NA	False	NA	NA	NA	160487895	160545607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491
Isoform_45102_4	chr2	+	3761	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	90	5	-2	-5	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTTAGCGTCTGCCTG	NA	False	NA	18	True	AATAAA	-16	NA	160487897	160564679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
Isoform_45104_60	chr2	+	5192	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-16	9	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTGTTTCTTGGGGG	NA	False	NA	25	True	AATAAA	-26	NA	160573203	160605215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
Isoform_45106_36	chr2	+	3396	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	57	5	-6	0	multi-exon	TRUE	canonical	3	25	junction_3	8.54837950981163	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTTGAGAACCACGG	NA	False	NA	NA	False	NA	NA	NA	160730084	160747917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
Isoform_4511_3	chr10	+	165	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATTAAAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	62359045	62359210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_62359000_62359200
Isoform_45110_26	chr2	+	1883	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-183	0	1	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATTGCCTTATTGAAT	NA	False	NA	15	True	AATAAA	-13	NA	162773447	162777129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45111_11	chr2	+	2024	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-31	-327	3	145	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTGTTAATCTACC	NA	False	NA	10	True	AATAAA	-23	NA	162773450	162777273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45112_156	chr2	+	1759	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1768	0	145	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTGTTAATCTACC	NA	False	NA	10	True	AATAAA	-23	NA	162773447	162777273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45113_12	chr2	+	1786	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-27	1768	-27	145	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCTGTTAATCTACC	NA	False	NA	10	True	AATAAA	-23	NA	162773420	162777273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45114_72	chr2	+	3525	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	2	0	-2	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGTTCTTCATTTAT	NA	False	NA	15	True	AATAAA	-16	NA	162773447	162779039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45115_270	chr2	+	1615	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1912	0	1	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATTGCCTTATTGAAT	NA	False	NA	15	True	AATAAA	-13	NA	162773447	162777129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45116_9	chr2	+	3552	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-27	2	-27	-2	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGTTCTTCATTTAT	NA	False	NA	15	True	AATAAA	-16	NA	162773420	162779039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45117_14	chr2	+	1673	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-58	1912	-58	1	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATTGCCTTATTGAAT	NA	False	NA	15	True	AATAAA	-13	NA	162773389	162777129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
Isoform_45120_176	chr2	+	2124	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	121	3	-16	-3	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTGTCATTGATAT	NA	False	NA	16	True	ATTAAA	-28	NA	162859394	162888058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_45122_9	chr2	+	2536	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	121	-409	-16	409	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162859394	162888470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_45123_8	chr2	+	1992	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-16	-5	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859394	162888056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_45124_25	chr2	+	2235	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859404	162888056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_45142_4110	chr2	+	2702	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-64	1013	-64	976	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	4110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896542	162925595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_45143_989	chr2	+	3722	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-71	0	-71	0	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162896535	162926608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_45145_101	chr2	+	2781	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-143	1013	-143	976	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896463	162925595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_45154_222	chr2	+	2236	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-22	975	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896584	162925594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
Isoform_4516_8	chr10	-	1311	1	FSM	ENSMUSG00000020076.8	ENSMUST00000218224.2	2681	1	-445	1815	-400	-1815	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	9875	False	NA	NA	False	NA	NA	NA	62487397	62486086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62486100_62487400
Isoform_4517_8	chr10	-	919	1	FSM	ENSMUSG00000020076.8	ENSMUST00000218224.2	2681	1	-53	1815	-8	-1815	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	8098	False	NA	NA	False	NA	NA	NA	62487005	62486086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62486100_62487000
Isoform_4518_9	chr10	+	1325	1	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	4	551	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAATCGTGCT	NA	False	NA	NA	False	NA	NA	NA	7543281	7544606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_7543300_7544600
Isoform_4520_4	chr10	+	176	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62716651	62716827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_62716700_62716800
Isoform_45201_4	chr2	+	4497	5	FSM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	23	2	-12	-2	multi-exon	FALSE	canonical	2	4	junction_1	8.69985632065266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5714	False	NA	NA	False	AATAAA	-15	NA	163444256	163460930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163444335_163449128_163449595_163453678_163453873_163455654_163455766_163457282
Isoform_45202_7	chr2	+	4475	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	34	-2510	5	-2	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5733	False	NA	NA	False	AATAAA	-15	NA	163444275	163460930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
Isoform_45203_9	chr2	+	1114	5	FSM	ENSMUSG00000035268.15	ENSMUST00000099105.9	640	5	-9	-465	7	1	multi-exon	FALSE	canonical	3	7	junction_1	187.314408148439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8610	False	NA	9	True	AATAAA	-19	NA	163500325	163568073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163500413_163501069_163501156_163545405_163545476_163563047_163563222_163567376
Isoform_45205_294	chr2	+	1039	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	0	-3	0	-1	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGATCTTTTCTTTTAA	8603	False	NA	13	True	AATAAA	-23	NA	163500318	163568077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
Isoform_45206_53	chr2	+	957	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	21	5	-8	1	multi-exon	FALSE	canonical	3	64	junction_1	157.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTATGATCTTTTCTT	8611	False	NA	9	True	AATAAA	-19	NA	163500326	163568073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163500413_163563047_163563222_163567376
Isoform_4521_3	chr10	-	171	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAAAG	5420	False	NA	NA	False	NA	NA	NA	62772411	62772240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_62772200_62772400
Isoform_45213_15	chr2	+	2811	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	202	0	202	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163837081	163860508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
Isoform_4522_13	chr10	-	1349	1	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-5	-4744	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	5776	False	NA	NA	False	NA	NA	NA	62859678	62858329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62858300_62859700
Isoform_45227_163	chr2	+	1021	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	549	7	-549	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCCATGACAGCCAGTA	NA	False	NA	29	True	AATAAA	-23	NA	164302926	164306879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_4523_6	chr10	-	218	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8482	False	NA	NA	False	NA	NA	NA	62871329	62871111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_62871100_62871300
Isoform_45230_11	chr2	+	1576	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	-6	7	2	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGTACTTAAGTCAT	NA	False	NA	NA	False	CATAAA	-20	NA	164302926	164307434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_45231_10	chr2	+	1154	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-89	541	-89	-541	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGCCAGTACCTTTGCT	NA	False	NA	37	True	AATAAA	-31	NA	164302801	164306887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_45232_24	chr2	+	1404	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	166	7	-166	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCAACTGTGGCAGGA	NA	False	NA	8	True	NA	NA	NA	164302926	164307262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_45233_3	chr2	+	1528	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-88	166	-88	-166	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCAACTGTGGCAGGA	NA	False	NA	8	True	NA	NA	NA	164302802	164307262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
Isoform_45234_12	chr2	+	945	3	ISM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	286	547	-52	-547	3prime_fragment	FALSE	canonical	3	303	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATGACAGCCAGTACC	NA	False	NA	31	True	AATAAA	-25	NA	164303176	164306881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164303450_164305220_164305289_164306277
Isoform_45235_5	chr2	+	1700	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	9	3	-2	-3	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATCACTGTTAATCAT	5136	False	NA	NA	False	ATTAAA	-21	NA	164339463	164345037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
Isoform_45236_138	chr2	+	2474	14	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	55.0155437960182	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTTGCTTCCTTCCTAA	5136	False	NA	7	True	AATAAA	-16	NA	164339463	164350221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349454_164349485_164349719_164349750
Isoform_45237_385	chr2	+	717	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	136	-4	1	4	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCCTCACTTTCTTCT	249	False	NA	30	True	AATAAA	-36	NA	164404634	164410434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
Isoform_45239_66	chr2	+	857	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	-9	1	-9	-1	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	104	False	NA	25	True	AATAAA	-31	NA	164404489	164410429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
Isoform_4524_5	chr10	-	246	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAAGAAATT	1880	False	NA	NA	False	NA	NA	NA	63242272	63242026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_63242000_63242300
Isoform_45241_31	chr2	+	757	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	216.583101833915	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGCCTCACTTTCTT	249	False	NA	28	True	AATAAA	-34	NA	164404634	164410432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410254
Isoform_45245_21	chr2	+	571	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGCCTCACTTTCTT	249	False	NA	28	True	AATAAA	-34	NA	164404634	164410432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
Isoform_45247_11	chr2	+	555	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	-122	-4	-2	4	multi-exon	FALSE	canonical	3	78	junction_1	240.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCCTCACTTTCTTCT	111	False	NA	30	True	AATAAA	-36	NA	164404496	164410434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164404725_164407711_164407859_164410254
Isoform_45248_25	chr2	+	412	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	16	1	1	-1	multi-exon	FALSE	canonical	3	78	junction_1	240.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTTGCCTCACTTT	249	False	NA	25	True	AATAAA	-31	NA	164404634	164410429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164404725_164407711_164407859_164410254
Isoform_45251_8	chr2	+	3395	2	NIC	ENSMUSG00000017723.12	novel	558	4	NA	NA	1	-5	intron_retention	FALSE	canonical	3	559	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACACCTGCTTGCCTCA	249	False	NA	21	True	AATAAA	-27	NA	164404634	164410425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164407859_164410254
Isoform_45253_18	chr2	+	895	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-13	2004	4	-3	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTGTGTTGTGTTC	NA	False	NA	10	True	NA	NA	NA	164587937	164601476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
Isoform_45254_4	chr2	+	1414	11	ISM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	8	2816	8	-2816	5prime_fragment	FALSE	canonical	3	563	junction_10	70.6473637158528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164587910	164607711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080
Isoform_45255_149	chr2	+	1240	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	35	389	4	-389	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGGTAGTGAGCCTGC	NA	False	NA	13	True	ATTAAA	-13	NA	164587937	164610138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
Isoform_45256_10	chr2	+	1646	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	18	0	-13	0	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTTTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	164587920	164610527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
Isoform_45259_2007	chr2	+	932	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	31	4	26	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	164611848	164614823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
Isoform_4526_3	chr10	-	1085	1	FSM	ENSMUSG00000048185.6	ENSMUST00000054760.6	425	1	105	-765	105	765	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAGAAAAAAAAAAGAAAT	NA	False	NA	34	True	ATTAAA	-23	NA	63257463	63256378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_63256400_63257500
Isoform_45261_557	chr2	+	963	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	0	4	0	-4	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	164611817	164614823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
Isoform_45265_5	chr2	+	1521	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	23	281	-3	147	multi-exon	FALSE	canonical	3	11	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627933	164634691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164628245_164628617_164628769_164633632
Isoform_45266_10	chr2	+	1510	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	44	1036	18	150	multi-exon	FALSE	canonical	3	13	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAATCTCTTTATTGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	164627954	164634694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164628245_164628617_164628776_164633632
Isoform_45268_166	chr2	+	2705	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	3	0	3	0	multi-exon	FALSE	canonical	3	86	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	3066	False	NA	22	True	AATAAA	-22	NA	164647020	164664050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164647352_164661676
Isoform_45270_4	chr2	+	2811	3	NNC	ENSMUSG00000045822.5	novel	2708	2	NA	NA	91	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACGTTTGTGTTTTTTG	3154	False	NA	17	True	AATAAA	-17	NA	164647108	164664045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_164647352_164654713_164654913_164661676
Isoform_45271_764	chr2	+	2374	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	327	4	0	-4	multi-exon	FALSE	canonical	3	571	junction_1	0	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTCGTGTCTTGTCTGG	8854	False	NA	12	True	AATAAA	-15	NA	164664932	164668787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164665121_164666601
Isoform_45273_37	chr2	+	2417	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	284	4	-43	-4	multi-exon	FALSE	canonical	3	571	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTCGTGTCTTGTCTGG	8811	False	NA	12	True	AATAAA	-15	NA	164664889	164668787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164665121_164666601
Isoform_45274_821	chr2	+	1819	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	905	1449	-1	-436	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	821	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675725	164681503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_45278_19	chr2	+	1904	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-1	-440	intron_retention	FALSE	canonical	3	800	junction_1	81.5756809102831	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACTGGGCTCTTCTCTG	NA	False	NA	13	True	ATTAAA	-13	NA	164675725	164681499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_45283_34	chr2	+	1955	14	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	974	438	0	-438	3prime_fragment	FALSE	canonical	3	937	junction_10	54.6384566651142	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675766	164681501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_45286_17	chr2	+	2068	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-436	intron_retention	FALSE	canonical	3	937	junction_9	56.2506790082474	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675766	164681503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
Isoform_45288_4	chr2	+	2097	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	59	-1545	6	50	multi-exon	FALSE	canonical	3	441	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	5955	False	NA	NA	False	NA	NA	NA	164721282	164726664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164721410_164724694
Isoform_45289_60	chr2	+	515	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	64	32	11	-32	multi-exon	FALSE	canonical	3	441	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCGTTAACAACCAGT	5960	False	NA	12	True	AATAAA	-22	NA	164721287	164725087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164721410_164724694
Isoform_4529_4	chr10	+	209	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCCCCAACCTGCAATG	NA	False	NA	NA	False	AAAAAG	-10	NA	66918853	66919062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_66918900_66919100
Isoform_45290_4	chr2	+	873	4	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	13	9710	13	50	5prime_fragment	FALSE	canonical	3	207	junction_3	108.249711316012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	5962	False	NA	NA	False	NA	NA	NA	164721289	164726664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224
Isoform_45291_5	chr2	+	1275	7	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	16	8093	16	1667	5prime_fragment	FALSE	canonical	3	171	junction_4	92.2528229017049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCGTTTGCGAAAGTG	5965	False	NA	NA	False	NA	NA	NA	164721292	164728281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827
Isoform_45292_9	chr2	+	2791	16	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	3080	11	-3080	intron_retention	FALSE	canonical	3	171	junction_4	62.5944264469467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGAGGGTCTTGG	5960	False	NA	14	True	AATACA	-12	NA	164721287	164733294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518
Isoform_45293_271	chr2	+	2689	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	3080	11	-3080	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGAGGGTCTTGG	5960	False	NA	14	True	AATACA	-12	NA	164721287	164733294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_45294_4	chr2	+	2750	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	3019	11	-3019	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTACCCAGGCCTTCAAAT	5960	False	NA	75	True	NA	NA	NA	164721287	164733355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
Isoform_45297_3	chr2	+	1202	3	NNC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTTTGGATACGGTG	7295	False	NA	NA	False	NA	NA	NA	164753328	164761874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_164753671_164756011_164756141_164761143
Isoform_45298_4	chr2	+	1293	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	16	1677	7	271	multi-exon	FALSE	canonical	3	6	junction_1	6.06217782649107	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATGACATCTCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	164897562	164913191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
Isoform_45299_3	chr2	+	2351	16	FSM	ENSMUSG00000017897.19	ENSMUST00000088132.13	2447	16	5	91	5	-91	multi-exon	FALSE	canonical	0	0	junction_1	2.44040069569642	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCGGAAGAGTGTGGT	NA	False	NA	0	True	AATAAA	-16	NA	165436956	165613548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165596360_165596451_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
Isoform_4530_3	chr10	-	2004	1	FSM	ENSMUSG00000040006.14	ENSMUST00000188270.2	1405	1	7	-606	5	606	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACACATAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	7668581	7666577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7666600_7668600
Isoform_45304_14	chr2	+	5753	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	1	1777	1	-5	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAGCCCACTCATCA	NA	False	NA	11	True	ATTAAA	-17	NA	165834557	165913385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_45305_25	chr2	+	5203	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	23	2305	23	-533	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGTCCTGCACTCTG	NA	False	NA	14	True	AATAAA	-14	NA	165834579	165912857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_45306_3	chr2	+	5272	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-49	2308	-48	-536	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCCAGGTCCTGCACT	NA	False	NA	11	True	AATAAA	-11	NA	165834507	165912854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_45307_21	chr2	+	5728	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	24	5	23	-5	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAGCCCACTCATCA	NA	False	NA	11	True	ATTAAA	-17	NA	165834579	165913385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_45308_30	chr2	+	5223	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	1	533	0	-533	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGTCCTGCACTCTG	NA	False	NA	14	True	AATAAA	-14	NA	165834556	165912857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
Isoform_4531_3	chr10	+	162	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAATAAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	67048096	67048258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_67048100_67048300
Isoform_45310_3	chr2	+	2810	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	12	1604	12	-1604	multi-exon	FALSE	canonical	3	131	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCCACATCCTACAGTG	NA	False	NA	NA	False	NA	NA	NA	166635698	166639821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166635989_166637301
Isoform_45312_69	chr2	+	1587	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	24	2815	24	775	multi-exon	FALSE	canonical	3	131	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAATATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	166635710	166638610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166635989_166637301
Isoform_45313_17	chr2	+	5930	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-34	2874	-34	-2874	multi-exon	TRUE	canonical	3	156	junction_4	19.7687636593819	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAAGTGCGCGGTGTTTTG	NA	False	NA	13	True	AATAAA	-25	NA	166647473	166737098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
Isoform_45316_317	chr2	+	3537	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	125	-2	-125	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCTTCAGGACAGGA	NA	False	NA	8	True	AATAAA	-20	NA	166747957	166788184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_45317_151	chr2	+	3618	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	14	9	14	-9	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGAATGGTGGTTTTT	NA	False	NA	28	True	CATAAA	-24	NA	166747992	166788300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_45318_11	chr2	+	3601	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-23	63	-4	-63	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACTTTCCCCATCTG	NA	False	NA	-26	True	AATGAA	-11	NA	166747955	166788246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
Isoform_45325_37	chr2	+	2161	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-17	7	-17	-7	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCATAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	166857212	166867726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
Isoform_4533_8	chr10	-	4587	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-55	-6	multi-exon	TRUE	non_canonical	3	148	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTACGTAGAAATAATGT	NA	False	NA	NA	False	AATAAA	-11	NA	67384953	67380346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_67382789_67382808
Isoform_45333_522	chr2	+	2595	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	107	12	-10	-12	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTTGAACAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	166857219	166876855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
Isoform_45342_6	chr2	+	653	4	FSM	ENSMUSG00000074578.15	ENSMUST00000143587.3	659	4	2	4	0	-4	multi-exon	FALSE	canonical	3	874	junction_1	54.8351063543137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	31	True	AATAAA	-41	NA	166905140	166907778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353
Isoform_45343_408	chr2	+	447	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	287	4	0	-4	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTGTGTCTTGAG	NA	False	NA	31	True	AATAAA	-41	NA	166905140	166907778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
Isoform_45345_5	chr2	+	667	4	FSM	ENSMUSG00000074578.15	ENSMUST00000125841.3	525	4	-2	-140	0	0	multi-exon	FALSE	canonical	3	874	junction_1	54.7783412186483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_166905218_166905555_166905648_166907078_166907401_166907606
Isoform_45347_5	chr2	+	2058	2	FSM	ENSMUSG00000039463.15	ENSMUST00000150326.2	2059	2	2	-1	2	1	multi-exon	FALSE	canonical	3	99	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAACCCATGAGA	NA	False	NA	NA	False	ACTAAA	-8	NA	167263644	167268055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167263686_167266038
Isoform_45348_29	chr2	+	4502	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	18	1	0	0	multi-exon	FALSE	non_canonical	2	49	junction_9	20.9574531790005	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263649	167318919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_45350_6	chr2	+	4484	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_6	29.1803586909643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167263631	167318918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_45351_3	chr2	+	2204	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	1	junction_6	32.5442007122621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCATGGCAGGGTTCAG	NA	False	NA	NA	False	AATGAA	-12	NA	167263631	167316556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288374_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
Isoform_45352_435	chr2	+	2144	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	354	4	-3	3	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCAATGTTTTCAT	NA	False	NA	20	True	AATAAA	-21	NA	167345362	167358089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
Isoform_45355_9	chr2	+	1993	5	FSM	ENSMUSG00000006418.18	ENSMUST00000127939.2	1985	5	-3	-5	-3	3	multi-exon	FALSE	canonical	3	9	junction_1	262.348051260153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGCAATGTTTTCAT	NA	False	NA	20	True	AATAAA	-21	NA	167345362	167358089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167345522_167352795_167352903_167353131_167353247_167354436_167354545_167356585
Isoform_45356_16	chr2	+	1610	3	FSM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	7	4	7	-4	multi-exon	FALSE	canonical	2	7	junction_2	2	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCTCAGTGTTGGGG	4762	False	NA	NA	False	AATAAA	-20	NA	167380121	167384730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167380292_167380590_167381119_167383818
Isoform_4536_29	chr10	-	3973	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-55	-620	multi-exon	FALSE	non_canonical	3	148	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACGCTGTCTGTCTGT	NA	False	NA	-3	True	AATAAA	-20	NA	67384953	67380960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_-_67382789_67382808
Isoform_45360_50	chr2	+	1747	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	38	2428	-7	2220	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCAGGTTTTTGTTAT	1098	False	NA	NA	False	AAAAAG	-32	NA	167774284	167818877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
Isoform_45361_3	chr2	+	1311	2	ISM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-23	12930	-23	-12930	5prime_fragment	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	167922900	167930193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_167923280_167929261
Isoform_45362_93	chr2	+	3429	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-37	7	-37	-7	multi-exon	FALSE	canonical	3	144	junction_1	5.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTACTTTCTTGTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	167922886	167943116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167923280_167929261_167929485_167940303
Isoform_45365_6	chr2	+	3490	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-98	7	-98	-7	multi-exon	FALSE	canonical	3	144	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTACTTTCTTGTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	167922825	167943116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167923280_167929261_167929485_167940303
Isoform_45369_353	chr2	+	677	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	203	55	-7	1	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4045	False	NA	13	True	ATTAAA	-16	NA	170353357	170360988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
Isoform_4537_3	chr10	-	3972	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-37	623	-37	-623	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGACGCTGTCTGTC	NA	False	NA	-6	True	AATAAA	-17	NA	67384935	67380963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_67381000_67384900
Isoform_45371_8	chr2	+	727	4	FSM	ENSMUSG00000052033.14	ENSMUST00000109148.8	736	4	-46	55	29	1	multi-exon	FALSE	canonical	3	14	junction_1	387.259029017472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4081	False	NA	13	True	ATTAAA	-16	NA	170353393	170360988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_170353476_170357658_170357767_170358469_170358611_170360592
Isoform_45372_5	chr2	+	1114	5	NNC	ENSMUSG00000052033.14	novel	666	4	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	415.990684991864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCTCTATATTATTA	4049	False	NA	11	True	ATTAAA	-14	NA	170353361	170360986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_170353614_170353638_170353858_170357658_170357767_170358469_170358611_170360592
Isoform_45375_12	chr2	+	3587	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	30	0	30	0	multi-exon	FALSE	canonical	3	138	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTCTGCCGTCTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	172187514	172197669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_45376_57	chr2	+	777	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	39	2801	39	-2801	multi-exon	FALSE	canonical	3	138	junction_1	7.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	172187523	172194868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_45377_17	chr2	+	1677	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	75	1865	75	-1865	multi-exon	FALSE	canonical	3	138	junction_1	7.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATGTCTTAATTAGG	NA	False	NA	NA	False	AATACA	-10	NA	172187559	172195804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_45378_3	chr2	+	855	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	-44	2806	-44	-2806	multi-exon	FALSE	canonical	3	138	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTTTTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	172187440	172194863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172187768_172193374_172193545_172194505
Isoform_45379_66	chr2	+	1970	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	1	-1362	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCCTTCTTCACGT	NA	False	NA	20	True	AATAAA	-20	NA	172212601	172223006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_45380_33	chr2	+	3325	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGTGACGTAAAGGTAGT	NA	False	NA	11	True	AATAAA	-18	NA	172212606	172224366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_45384_5	chr2	+	4196	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	243	1365	243	-1365	intron_retention	FALSE	canonical	3	206	junction_1	83.4056353012193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	17	True	AATAAA	-17	NA	172212896	172223003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535
Isoform_45385_54	chr2	+	3211	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	243	-3	243	3	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTAAAGGTAGTTTGTG	NA	False	NA	16	True	AATAAA	-23	NA	172212896	172224371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_45386_65	chr2	+	1846	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	243	1362	243	-1362	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCCTTCTTCACGT	NA	False	NA	20	True	AATAAA	-20	NA	172212896	172223006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_45387_4	chr2	+	2135	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	-50	1366	3	-1366	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTTCCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-16	NA	172212603	172223002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
Isoform_45391_229	chr2	+	2145	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	22	6	22	-6	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGGGGGGGTTGGTT	NA	False	NA	10	True	AATAAA	-10	NA	172282497	172311822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
Isoform_45393_214	chr2	+	2832	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	1	5	1	-2	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172391513	172400537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45403_9	chr2	+	2677	7	FSM	ENSMUSG00000028640.12	ENSMUST00000128406.8	2724	7	55	-8	55	-4	multi-exon	FALSE	canonical	0	0	junction_1	241.022589997056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGTCTGGTTCTGAC	NA	False	NA	18	True	AATAAA	-20	NA	172392627	172400535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172392764_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45404_101	chr2	+	2727	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	47	2	47	-2	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172392957	172400537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45405_10	chr2	+	3071	7	FSM	ENSMUSG00000028640.12	ENSMUST00000099058.10	2985	7	-88	2	41	-2	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172392613	172400537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45410_8	chr2	+	3295	6	ISM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	1061	6	1	-3	3prime_fragment	FALSE	canonical	3	564	junction_3	44.2113107699828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTCTGGTTCTGACC	NA	False	NA	19	True	AATAAA	-21	NA	172392573	172400536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45411_7	chr2	+	1537	12	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	14	-58	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	326.651961776187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841930	172857474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_45413_7	chr2	+	1103	4	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	56	9881	49	-3586	5prime_fragment	FALSE	canonical	3	1114	junction_3	78.4984076271615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	172841965	172847651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952
Isoform_45416_528	chr2	+	1660	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	23	59	16	-59	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841932	172857473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_45417_18	chr2	+	1673	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	65	4	58	-4	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCTATGTTCCAAGTT	NA	False	NA	81	True	NA	NA	NA	172841974	172857528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
Isoform_4542_62	chr10	-	1483	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-42	3117	-42	-3117	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTTCGGTGACTCAGAT	NA	False	NA	-4	True	AATACA	-22	NA	67384940	67383457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_67383500_67384900
Isoform_45421_34	chr2	+	1719	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173878.8	936	4	30	-813	16	1	multi-exon	FALSE	canonical	0	0	junction_1	369.719713657071	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863721	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864041_172864584_172864709_172865119_172865175_172875298
Isoform_45422_415	chr2	+	1741	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	28	-1	17	1	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
Isoform_45423_48	chr2	+	1769	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	0	-1	0	1	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863694	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
Isoform_45425_8	chr2	+	1878	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173720.2	620	4	-182	-1076	16	1	multi-exon	FALSE	canonical	3	8	junction_1	365.954763446097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863721	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864200_172864584_172864709_172865119_172865175_172875298
Isoform_45426_11	chr2	+	1965	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173997.2	440	4	-508	-1017	17	1	multi-exon	FALSE	canonical	2	17	junction_1	361.719351001421	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863722	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864288_172864584_172864709_172865119_172865175_172875298
Isoform_45427_29	chr2	+	2261	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	18	2	18	1	multi-exon	FALSE	canonical	3	757	junction_2	26	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGTGGTTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	172863723	172876519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_172864709_172865119_172865175_172875298
Isoform_45429_170	chr2	+	1906	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	89	5160	-7	1029	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGACTAGTCCTTCC	NA	False	NA	5	True	AATAAA	-18	NA	173501641	173543976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_45430_3	chr2	+	4596	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	87	2472	-9	-2444	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGAAAAAATATTCTGAG	NA	False	NA	NA	False	AATAAA	-8	NA	173501639	173546664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_45434_9	chr2	+	1836	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	79	5130	-17	1031	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACTAGTCCTTCCTG	NA	False	NA	7	True	AATAAA	-20	NA	173501631	173543978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
Isoform_45436_296	chr2	+	1979	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	74	4979	74	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579377	173621153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
Isoform_45437_14	chr2	+	2077	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	-24	4979	-24	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579279	173621153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
Isoform_45440_3	chr2	+	2677	9	FSM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	-604	1792	0	1012	multi-exon	TRUE	canonical	1	10	junction_1	35.0633355515416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTATCGACTCTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	173918110	173939772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173918983_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
Isoform_45441_292	chr2	+	2094	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	4	369	4	-1	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952145	173964494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
Isoform_45442_18	chr2	+	2130	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	-32	369	-32	-1	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952109	173964494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
Isoform_45443_74	chr2	+	2374	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	4	-1	intron_retention	FALSE	canonical	3	237	junction_8	19.4907670449369	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952145	173964494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
Isoform_45445_7	chr2	+	2450	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	5	-1	intron_retention	FALSE	canonical	2	4	junction_6	108.010925373316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173952146	173964494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961297_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
Isoform_45447_9	chr2	+	1565	12	ISM	ENSMUSG00000027523.21	ENSMUST00000109096.9	2465	13	992	3	-46	-3	3prime_fragment	FALSE	canonical	3	9	junction_1	249.01252914145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGGTGTTGCTCTTTG	6250	False	NA	12	True	AATAAA	-16	NA	174127104	174188534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_174127271_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_45448_18	chr2	+	1567	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAATGAGCAAAA	NA	False	NA	-5	True	ATTAAA	-10	NA	174169549	174188517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
Isoform_45455_934	chr2	+	2231	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	49	-1	2	1	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257645	174269296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_45456_45	chr2	+	2266	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	14	-1	14	1	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257610	174269296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_45459_17	chr2	+	2122	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	158.919241892815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257623	174269296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_4546_15	chr10	+	176	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAACCAAAAAA	401	False	NA	NA	False	NA	NA	NA	69192496	69192672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_69192500_69192700
Isoform_45461_57	chr2	+	2895	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	502	junction_10	48.356890810813	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATATTTTACTCATTTC	NA	False	NA	38	True	AATAAA	-19	NA	174257625	174269293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
Isoform_4547_3	chr10	-	650	1	Antisense	novelGene_ENSMUSG00000048701.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70027672	70027022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_-_70027000_70027700
Isoform_45470_7	chr2	+	1439	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	-8	-512	-8	512	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATTTCACGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	174852025	174859917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
Isoform_45472_9	chr2	+	1256	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-131	1297	-53	339	5prime_fragment	FALSE	canonical	3	436	junction_1	382.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	174851980	174859744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_174852115_174858430_174858558_174858749
Isoform_45474_3	chr2	+	3214	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-104	-1829	-26	1829	multi-exon	FALSE	canonical	3	436	junction_1	343.521307765456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTATATTAAAAAAAAAAGA	NA	False	NA	-16	True	NA	NA	NA	174852007	174862870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951
Isoform_45475_9	chr2	+	1439	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3096	-510	3018	510	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGATTTCACGTGTG	NA	False	NA	NA	False	NA	NA	NA	174855129	174859915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_174855276_174858430_174858558_174858749
Isoform_45478_6	chr2	-	451	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3078	-980	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	5426	False	NA	NA	False	NA	NA	NA	177266914	177261976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
Isoform_4548_16	chr10	-	186	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAGAAAGGCTA	NA	False	NA	NA	False	NA	NA	NA	70076909	70076723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_70076700_70076900
Isoform_45481_4	chr2	+	454	5	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	79.6649232724164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	175661073	175671677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567
Isoform_45483_7	chr2	+	1911	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-51	765	-51	-765	5prime_fragment	FALSE	canonical	3	143	junction_2	82	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAGTAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	176766061	176778062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_176766152_176776035_176776163_176776368
Isoform_45484_11	chr2	+	384	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-51	33905	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	117.565111982916	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACACCATGACTGTAA	NA	False	NA	NA	False	NA	NA	NA	176766061	176813045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176812939
Isoform_45485_4	chr2	+	539	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-41	-1414	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	177189966	177199248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
Isoform_45486_9	chr2	+	458	5	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	5	-299	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	35.4436171968946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	22	True	NA	NA	NA	177190012	177200363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
Isoform_45487_3	chr2	+	406	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-109	912	-9	-310	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACACCATGACTGTAA	NA	False	NA	11	True	NA	NA	NA	177189998	177200352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
Isoform_45488_3	chr2	+	1284	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	2	-586	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTGTTCCCATTTC	NA	False	NA	NA	False	NA	NA	NA	177190009	177411169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
Isoform_45489_7	chr2	+	451	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	12	-259	multi-exon	FALSE	canonical	3	49	junction_2	85.9200209497181	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177190019	177411496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168_177410230_177411379
Isoform_4549_9	chr10	-	187	1	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTAAAGAGTTCATATGC	NA	False	NA	NA	False	NA	NA	NA	70845463	70845276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_70845300_70845500
Isoform_45490_13	chr2	+	542	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	14	-268	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCATGACTGTAACC	NA	False	NA	NA	False	NA	NA	NA	177190021	177411487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
Isoform_45492_7	chr2	+	380	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	21	-266	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCATGACTGTAACCAA	NA	False	NA	NA	False	NA	NA	NA	177190028	177411489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
Isoform_45493_9	chr2	+	540	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-55	259	-55	-259	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177401025	177411496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_45495_4	chr2	+	1194	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000074521.10	novel	192	2	NA	NA	-2	-244	multi-exon	FALSE	canonical	3	23	junction_2	151.098937418133	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGAGTTCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	177401078	177547333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr2_+_177401169_177404638_177404694_177546077_177546205_177546411
Isoform_45496_3	chr2	+	597	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-10	-259	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	177401070	177411496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
Isoform_45497_3	chr2	+	619	3	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	14	34624	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTTGTTTGAAATAT	NA	False	NA	NA	False	TTTAAA	-9	NA	177538902	177582201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_177539047_177568633_177568718_177581810
Isoform_45498_6	chr2	+	2273	4	FSM	ENSMUSG00000070476.11	ENSMUST00000094251.11	4541	4	-4	2272	-4	1866	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178056312	178063949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_178056502_178058424_178058537_178059298_178059385_178062063
Isoform_45499_6	chr2	+	2729	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	18	-2010	18	2010	multi-exon	FALSE	canonical	3	53	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	179056746	179060685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179056894_179057552_179057714_179058264
Isoform_455_20	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6002_+_0_6000
Isoform_4550_3	chr10	+	4976	1	FSM	ENSMUSG00000053830.5	ENSMUST00000217785.2	1836	1	-115	-3025	-115	3025	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	72145035	72150011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_72145000_72150000
Isoform_45500_13	chr2	+	720	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	18	-1	18	1	multi-exon	FALSE	canonical	3	53	junction_2	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGGTAATGACCCTT	NA	False	NA	8	True	AATAAA	-23	NA	179056746	179058676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179056894_179057552_179057714_179058264
Isoform_45501_3	chr2	+	569	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCTTGGTAATGACC	NA	False	NA	5	True	AATAAA	-20	NA	179056747	179058673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179056894_179057552_179057714_179058411
Isoform_45502_6	chr2	+	1392	6	FSM	ENSMUSG00000000305.13	ENSMUST00000108911.2	1208	6	-187	3	4	-3	multi-exon	FALSE	canonical	3	23	junction_4	4.89897948556636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTTGGCTTGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	179084227	179489494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012
Isoform_45505_9	chr2	+	3417	16	FSM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	4	2967	4	257	multi-exon	FALSE	canonical	3	15	junction_13	5.18802038889166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	NA	False	NA	NA	False	AAAAAG	-22	NA	179084227	179538199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
Isoform_45507_98	chr2	+	2646	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	16.1176232049821	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666783	179677253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_45508_47	chr2	+	2702	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-52	-1	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	16.1176232049821	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666727	179677253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_4551_7	chr10	-	224	1	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTTTTTTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	73091385	73091161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_73091200_73091400
Isoform_45511_49	chr2	+	2563	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-30	1	-30	-1	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666749	179677253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_45512_125	chr2	+	2537	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-5	2	-5	-2	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCCTCTGTCCGTC	NA	False	NA	13	True	AATAAA	-14	NA	179666774	179677252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_45517_11	chr2	+	2295	7	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	21.8993911635309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGCCTCTGTCCGTCA	NA	False	NA	14	True	AATAAA	-15	NA	179666771	179677253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179673853_179674016_179674293_179674445_179675478_179675664_179676090
Isoform_45519_8	chr2	+	4349	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	-8	2	-8	-2	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCATTTCTGTTTATTG	NA	False	NA	16	True	ATTAAA	-17	NA	179684293	179711992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
Isoform_4552_63	chr10	-	5181	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74555795	74550614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_74550600_74555800
Isoform_45520_11	chr2	+	1194	2	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	8	7636	8	-7636	5prime_fragment	FALSE	canonical	3	114	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179712392	179714764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_179712409_179713586
Isoform_45521_8	chr2	+	1359	6	ISM	ENSMUSG00000039069.20	ENSMUST00000147264.8	2224	10	6	3004	2	1	5prime_fragment	FALSE	canonical	3	103	junction_3	49.2203210066737	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	179712386	179724684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878
Isoform_45522_48	chr2	+	1692	10	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	39.9749921826134	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_45523_9	chr2	+	1684	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	58.3300528178091	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712387	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726376_179727172
Isoform_45524_7	chr2	+	1716	10	FSM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	8	6	8	1	multi-exon	FALSE	canonical	3	26	junction_8	58.7703208880465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712392	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
Isoform_45525_9	chr2	+	1553	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	58.60873974929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_45526_3	chr2	+	1261	5	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	71.207443431147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	179712389	179724683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878
Isoform_45527_17	chr2	+	1598	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	53.7558136390847	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_45528_3	chr2	+	1458	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_7	74.9503236844789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712387	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179727172
Isoform_45529_3	chr2	+	1612	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	26	junction_7	70.4856171301793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712381	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172_179727591_179727611
Isoform_45530_5	chr2	+	1128	4	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	81.9972899281162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	179712381	179724681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878
Isoform_45531_3	chr2	+	1229	6	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	-1187	intron_retention	FALSE	canonical	3	30	junction_2	71.303295856503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAATTTTAATGAGTC	NA	False	NA	NA	False	NA	NA	NA	179712386	179726501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856
Isoform_45532_3	chr2	+	2425	6	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	30	junction_2	71.303295856503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTGTCTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	179712383	179727694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856
Isoform_45533_8	chr2	+	1459	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	60.3080527333605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_45534_4	chr2	+	1483	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	74.3955232359516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712392	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
Isoform_45536_5	chr2	+	1495	8	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-644	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	61	junction_7	51.0314028969678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTGTCTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	179719768	179727694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172_179727591_179727611
Isoform_45538_109	chr2	+	2789	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	17	-1	-12	1	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTGAAGGTTTGAT	NA	False	NA	11	True	ATTAAA	-17	NA	179761115	179804474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
Isoform_45543_3	chr2	+	1823	7	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	132	0	3	0	intron_retention	FALSE	canonical	3	1931	junction_6	151.143879208595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813409	179818079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952
Isoform_45544_128	chr2	+	1403	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	132	0	3	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813409	179818079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
Isoform_45546_14	chr2	+	1463	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	70	2	-40	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813347	179818077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
Isoform_45547_10	chr2	+	1517	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	16	2	16	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813293	179818077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
Isoform_45551_1992	chr2	+	352	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	40	2	-1	1	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	1992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCTTTTGCTGTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	179899209	179900236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
Isoform_45557_46	chr2	+	500	5	NIC	ENSMUSG00000039001.13	novel	394	6	NA	NA	24	1	intron_retention	FALSE	canonical	3	3954	junction_4	1482.42763314099	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCTTTTGCTGTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	179899234	179900236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
Isoform_45561_43	chr2	+	2945	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	44	21	44	1	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGATCCTTGTGTGA	NA	False	NA	4	True	AATATA	-13	NA	180098081	180116639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_45563_3	chr2	+	4269	11	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	55	junction_10	6.52763356814704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGATCCTTGTGTGA	NA	False	NA	4	True	AATATA	-13	NA	180098127	180116639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
Isoform_45565_24	chr2	+	1494	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	20	-4	0	4	multi-exon	TRUE	canonical	3	47	junction_3	10.4253297309965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTATCT	NA	False	NA	NA	False	ATTAAA	-7	NA	180224524	180228084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
Isoform_45566_5	chr2	+	1773	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	38	14	3	3	multi-exon	FALSE	canonical	3	65	junction_2	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224553	180228083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
Isoform_45567_171	chr2	+	2247	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	197	5	-20	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231234	180237624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
Isoform_45569_33	chr2	+	2193	9	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	-20	-5	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_7	18.4306131205666	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231234	180237624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000_180236947_180236973_180237082_180237108
Isoform_45570_6	chr2	+	2140	22	ISM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	6773	384	1810	199	3prime_fragment	FALSE	canonical	2	8	junction_11	3.68363421063118	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTACTGGTTATAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	180246787	180263594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
Isoform_45572_15	chr2	+	1599	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	50	6	50	-3	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAATGGCTTCTAAAA	NA	False	NA	12	True	AATAAA	-23	NA	180351959	180360520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_45574_37	chr2	+	1351	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	67	237	67	-234	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACTTTTGTGTGGGT	NA	False	NA	28	True	TATAAA	-19	NA	180351976	180360289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_45577_10	chr2	+	1474	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	-38	219	-38	-216	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGAGTTTGGATCGGTT	NA	False	NA	46	True	TATAAA	-37	NA	180351871	180360307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_45578_5	chr2	+	1687	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	-39	7	-39	-4	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCACAATGGCTTCTAAA	NA	False	NA	11	True	AATAAA	-22	NA	180351870	180360519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
Isoform_45579_3	chr2	+	2624	2	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-31	26	-31	-26	intron_retention	FALSE	canonical	3	234	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGAAGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180367140	180376192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_180367245_180373672
Isoform_45580_3	chr2	+	1060	4	ISM	ENSMUSG00000023393.16	ENSMUST00000139817.2	754	7	-48	2704	-27	-17	5prime_fragment	FALSE	canonical	3	39	junction_2	92.8810469842416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	180367144	180376201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509
Isoform_45581_18	chr2	+	2102	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-19	-6	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367152	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45582_12	chr2	+	2192	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	7	-6	combination_of_known_junctions	TRUE	canonical	3	39	junction_2	51.5985437994351	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367062	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45583_28	chr2	+	2259	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	10	6	10	-6	multi-exon	FALSE	canonical	3	124	junction_2	30.6879455161143	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367065	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45584_61	chr2	+	2215	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	54	6	54	-6	multi-exon	FALSE	canonical	3	124	junction_2	30.6879455161143	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367109	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45585_3	chr2	+	2154	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-36	-6	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	63.6142818831128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367135	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45586_3	chr2	+	2064	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-30	-2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	65.8692644561938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367141	180384071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45587_5	chr2	+	2076	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-23	-6	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	52.1550453966879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367148	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45588_5	chr2	+	2567	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	57	-6	intron_retention	FALSE	canonical	3	182	junction_6	18.7713514794124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATTGTTGTTTTAT	NA	False	NA	23	True	ATTAAA	-8	NA	180367112	180384067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
Isoform_45589_34	chr2	+	2715	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	5	4	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGTGTCTGTCA	4039	False	NA	-37	True	NA	NA	NA	180609031	180624257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_45593_199	chr2	+	2642	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	5	67	5	1	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGGTTTGTGTGTC	4039	False	NA	-42	True	NA	NA	NA	180609031	180624252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_45596_41	chr2	+	2699	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	13	2	2	-2	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4047	False	NA	23	True	NA	NA	NA	180609039	180624317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_45598_7	chr2	+	2549	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_11	68.6480557303377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTGTGGTTTGTGTG	4070	False	NA	-44	True	NA	NA	NA	180609062	180624250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
Isoform_45599_6	chr2	+	3297	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	7	2	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTTTGTGTGTCTGT	4052	False	NA	-39	True	NA	NA	NA	180609044	180624255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
Isoform_45602_60	chr2	+	818	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	75	267	-14	0	multi-exon	FALSE	canonical	3	201	junction_1	270.955139275859	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3411	False	NA	1	True	AATAAA	-17	NA	180829114	180830297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_45603_3	chr2	+	763	4	NIC	ENSMUSG00000016344.15	novel	1153	4	NA	NA	0	-3	combination_of_known_splicesites	TRUE	canonical	3	42	junction_2	354.595544247245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCCTGGTATGTTTGA	3385	False	NA	-2	True	AATAAA	-14	NA	180829088	180830294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180829248_180829342_180829530_180829796_180829894_180829974
Isoform_45604_4	chr2	+	890	4	FSM	ENSMUSG00000016344.15	ENSMUST00000127971.8	1153	4	26	237	-14	0	multi-exon	FALSE	canonical	3	201	junction_1	312.789954371229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3411	False	NA	1	True	AATAAA	-17	NA	180829114	180830297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829342_180829680_180829796_180829894_180829974
Isoform_45605_39	chr2	+	701	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	258	junction_1	248.035279748668	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3415	False	NA	3	True	AATAAA	-19	NA	180829118	180830299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_45606_22	chr2	+	729	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-40	0	0	0	multi-exon	TRUE	canonical	3	258	junction_1	248.035279748668	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3385	False	NA	1	True	AATAAA	-17	NA	180829088	180830297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_45607_28	chr2	+	777	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-25	-2	-14	2	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3411	False	NA	3	True	AATAAA	-19	NA	180829114	180830299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
Isoform_45609_6	chr2	+	2757	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-44	-1963	7	1696	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATTTAGCTCTC	3392	False	NA	NA	False	NA	NA	NA	180829095	180832260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
Isoform_45612_6	chr2	+	904	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCTGGTATGTTTGAA	3418	False	NA	-1	True	AATAAA	-15	NA	180829121	180830295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
Isoform_45613_6	chr2	+	553	3	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	71	3	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	409.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTATGTTTGAAACATT	3696	False	NA	4	True	AATAAA	-20	NA	180829399	180830300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180829530_180829796_180829894_180829974
Isoform_45614_7	chr2	+	706	3	FSM	ENSMUSG00000016344.15	ENSMUST00000138800.8	771	3	67	-2	67	2	multi-exon	FALSE	canonical	3	861	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3692	False	NA	3	True	AATAAA	-19	NA	180829395	180830299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180829680_180829796_180829894_180829974
Isoform_45616_33	chr2	+	4438	34	FSM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	-37	0	-14	0	multi-exon	FALSE	canonical	3	57	junction_31	50.0269348938753	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961517	180998409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
Isoform_45617_4	chr2	+	4340	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	4	0	intron_retention	FALSE	canonical	3	57	junction_31	58.0188267380112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961535	180998407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
Isoform_45618_5	chr2	+	4256	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_31	64.100711575534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961522	180998409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_45619_40	chr2	+	4406	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	-46	-38	0	0	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
Isoform_45620_11	chr2	+	4245	36	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_34	59.3590527456187	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961513	180998407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_45621_18	chr2	+	4321	33	FSM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	-14	0	-14	0	multi-exon	TRUE	canonical	3	28	junction_30	51.0130095998805	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961517	180998409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
Isoform_45623_33	chr2	+	4282	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	-39	0	-7	0	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961538	180998409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
Isoform_45624_10	chr2	+	4135	35	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_33	59.5404619481285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961506	180998407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
Isoform_45626_61	chr2	+	2074	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	1	-3	1	3	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAGTGGAGACTCA	NA	False	NA	8	True	ATTAAA	-15	NA	181007198	181022578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
Isoform_45628_11	chr2	+	3680	11	FSM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-17	3	1	-1	multi-exon	FALSE	canonical	3	28	junction_6	46.2520269826091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007198	181025418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_45629_6	chr2	+	4390	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	45	1	intron_retention	FALSE	canonical	3	53	junction_7	40.6748625620843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGGCTCTTGGTTGCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	181007289	181025420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_45630_5	chr2	+	4481	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	53	junction_7	40.6748625620843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGGCTCTTGGTTGCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	181007198	181025420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
Isoform_45631_6	chr2	+	2020	6	NIC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	59.0410027015124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTCTCAGTGGAGAC	NA	False	NA	5	True	ATTAAA	-12	NA	181007221	181022575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022195
Isoform_45632_10	chr2	+	1007	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-24	2	8	-2	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138999	181157178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
Isoform_45634_39	chr2	+	2352	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	42	1209	8	501	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138999	181158550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_45635_171	chr2	+	980	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	42	2581	8	-2	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138999	181157178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_45636_81	chr2	+	1494	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	42	2067	8	-357	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATACAATGTAGAATTTT	NA	False	NA	25	True	AATAAA	-21	NA	181138999	181157692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_45638_26	chr2	+	2312	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	26	612	8	503	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTTGTTTGGTCTGTCT	NA	False	NA	12	True	AATAAA	-26	NA	181138999	181158552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_45639_56	chr2	+	946	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	18	1986	0	-2	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGTGCCATCCTTTC	NA	False	NA	34	True	CATAAA	-31	NA	181138991	181157178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_4564_3	chr10	+	3179	1	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	2	-28665	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75047906	75051085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_+_75047900_75051100
Isoform_45640_44	chr2	+	1458	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	26	1466	8	-351	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGAATTTTATTCTG	NA	False	NA	31	True	AATAAA	-27	NA	181138999	181157698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
Isoform_45642_25	chr2	+	942	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-12	869	0	0	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138979	181157180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_45643_12	chr2	+	1440	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	8	351	8	-351	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAGAATTTTATTCTG	NA	False	NA	31	True	AATAAA	-27	NA	181138999	181157698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
Isoform_45646_15	chr2	+	1410	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	0	2065	0	-359	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATACAATGTAGAATT	NA	False	NA	23	True	AATAAA	-19	NA	181138979	181157690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
Isoform_45649_5	chr2	+	3767	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGAAAAAAAAAACAAAG	7039	False	NA	NA	False	NA	NA	NA	181162311	181194021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_4565_3	chr10	+	3099	1	Antisense	novelGene_ENSMUSG00000046807.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75387336	75390435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_+_75387300_75390400
Isoform_45652_6	chr2	+	3629	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	37	-2	37	2	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAGCAAAAC	7108	False	NA	NA	False	NA	NA	NA	181162380	181194027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_45653_23	chr2	+	3685	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	25	18	0	-1	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAACAAAGCAA	7071	False	NA	NA	False	NA	NA	NA	181162343	181194024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_45656_8	chr2	+	4379	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-19	-632	-19	632	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7027	False	NA	11	True	AATAAA	-12	NA	181162299	181194674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
Isoform_45658_3	chr2	+	3570	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAGCAAAAC	7043	False	NA	NA	False	NA	NA	NA	181162315	181194027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
Isoform_45660_11	chr2	+	4223	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	103	2252	37	632	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7108	False	NA	11	True	AATAAA	-12	NA	181162380	181194674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_45661_14	chr2	+	3638	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	41	2899	0	2	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAGCAAAAC	7046	False	NA	NA	False	NA	NA	NA	181162318	181194027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_45662_23	chr2	+	3610	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	66	2902	0	-1	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAACAAAGCAA	7071	False	NA	NA	False	NA	NA	NA	181162343	181194024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_45665_3	chr2	+	2996	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	9	3573	9	-672	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTCCATATGTAGATCA	7014	False	NA	NA	False	AATAAA	-16	NA	181162286	181193353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_45667_3	chr2	+	4301	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	25	2252	-16	632	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTGGTTTCTTGA	7030	False	NA	11	True	AATAAA	-12	NA	181162302	181194674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
Isoform_4567_24	chr10	-	1933	2	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	8426478	8424524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_8425710_8425730
Isoform_45671_672	chr2	+	2997	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	58	-1	4	1	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	672	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2552	False	NA	29	True	ATTAAA	-17	NA	181243169	181297454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
Isoform_45676_11	chr2	+	1171	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	8	4	8	-4	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCAGCTGGGTCCTGTCC	2300	False	NA	18	True	ATTAAA	-32	NA	181322110	181329860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
Isoform_45678_26	chr2	+	3514	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	46	9	-13	6	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTATTGCTTCTGTG	NA	False	NA	17	True	AATAAA	-20	NA	181479692	181499245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
Isoform_4568_3	chr10	-	2130	1	NIC	ENSMUSG00000001666.9	novel	649	3	NA	NA	52	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGACTTCTTTGCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	75609196	75607066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_75607100_75609200
Isoform_45682_3	chr2	+	2251	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	29	668	6	-668	multi-exon	FALSE	canonical	3	712	junction_2	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTCTAGAGTTTTGAT	8925	False	NA	NA	False	NA	NA	NA	181506158	181511955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45683_23	chr2	+	2190	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	92	666	69	-666	multi-exon	FALSE	canonical	3	712	junction_2	38.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTAGAGTTTTGATTT	8988	False	NA	NA	False	NA	NA	NA	181506221	181511957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45684_147	chr2	+	638	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	89	2221	66	-2221	multi-exon	FALSE	canonical	3	712	junction_2	38.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGTTTTCTCTGTGTA	8985	False	NA	16	True	AATAAA	-27	NA	181506218	181510402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45685_31	chr2	+	1679	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	89	1180	66	-1180	multi-exon	FALSE	canonical	3	712	junction_2	38.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCCTCAGTTCTTG	8985	False	NA	4	True	ATTAAA	-17	NA	181506218	181511443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45687_23	chr2	+	704	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	2221	0	-2221	multi-exon	FALSE	canonical	3	712	junction_2	38.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGTTTTCTCTGTGTA	8919	False	NA	16	True	AATAAA	-27	NA	181506152	181510402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_4569_9	chr10	+	175	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75679959	75680134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_75680000_75680100
Isoform_45690_3	chr2	+	1108	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	21	1819	-2	-1819	multi-exon	FALSE	canonical	3	712	junction_2	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGACTTTCTGGATG	8917	False	NA	NA	False	ACTAAA	-14	NA	181506150	181510804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45691_3	chr2	+	1702	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	65	1181	42	-1181	multi-exon	FALSE	canonical	3	712	junction_2	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCCTCAGTTCTT	8961	False	NA	3	True	ATTAAA	-16	NA	181506194	181511442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_181506363_181507738_181507827_181509996
Isoform_45693_11	chr2	+	356	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	-2646	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTACCCTTGCTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	135488442	135491337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135491052
Isoform_45694_4	chr2	+	538	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-2463	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAAATGAAAACA	NA	False	NA	NA	False	NA	NA	NA	135488443	135491520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135491052
Isoform_45695_9	chr2	+	706	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	0	intron_retention	FALSE	canonical	3	453	junction_1	106.871677986057	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488443	135493983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417
Isoform_45696_132	chr2	+	420	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488442	135493985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
Isoform_45697_42	chr2	+	384	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	2	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488442	135493985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
Isoform_45698_3	chr2	+	2704	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	2067	intron_retention	FALSE	canonical	3	137	junction_2	158	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	135488442	135496050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135493417
Isoform_45699_31	chr2	+	349	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAGCCCAAAATCAT	NA	False	NA	27	True	AATAAA	-37	NA	135488443	135493985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493766
Isoform_4570_7	chr10	-	229	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCAGCACTTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	75683156	75682927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_75682900_75683200
Isoform_45700_4	chr2	+	310	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-1	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_2	130.516920997496	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTCTGAGCCCAAAAT	NA	False	NA	24	True	AATAAA	-34	NA	135488443	135493982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_135488469_135490846_135490892_135493417_135493442_135493766
Isoform_45701_17	chr2	+	3857	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2248	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157262611	157313757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157262723_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45702_3	chr2	+	3998	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2105	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157262468	157313755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157262723_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45703_29	chr2	+	3973	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2245	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	44.3039133112852	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157262608	157313755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157262723_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45704_55	chr2	+	3145	2	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165652209	165660298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_165652330_165657273
Isoform_45706_13	chr2	+	1997	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	9	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165652161	165660298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_165652330_165657273_165657453_165658648
Isoform_45708_10	chr2	+	1634	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9319	4	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTTTCTCACCCTTCA	NA	False	NA	15	True	ATTAAA	-18	NA	156572730	156604879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45709_9	chr2	+	1594	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9493	-31	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156572904	156605013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45710_12	chr2	+	1459	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9488	-2	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	NA	False	NA	9	True	ATTAAA	-12	NA	156572899	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45712_5	chr2	+	1762	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9325	-31	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156572736	156605013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45714_7	chr2	+	3815	9	NNC	ENSMUSG00000033943.16	novel	825	2	NA	NA	-24707	-3	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	21.9544984001001	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAAGAAGAGAAAG	7945	False	NA	9	True	NA	NA	NA	119703001	119757169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859
Isoform_45715_15	chr2	+	3513	9	NNC	ENSMUSG00000033943.16	novel	825	2	NA	NA	-24405	-3	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	21.9544984001001	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAAGAAGAGAAAG	8247	False	NA	9	True	NA	NA	NA	119703303	119757169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859
Isoform_45718_3	chr2	+	2663	14	NNC	ENSMUSG00000057110.16	novel	3148	18	NA	NA	-22	6001	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	16.6853938180645	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGACATTTGAGTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	35022223	35043684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168
Isoform_45720_6	chr2	+	5934	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	20.7397623189571	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022227	35068834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
Isoform_45721_20	chr2	+	3798	14	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	38.3334791181517	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260364	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157260416_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45722_5	chr2	+	3918	15	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	47.3751851000638	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157260356	157313755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157260416_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45723_13	chr2	+	2838	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	246	-2	intron_retention	FALSE	canonical	3	30	junction_1	93.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	156682265	156697488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156682438_156686075_156686302_156695048
Isoform_45725_7	chr2	+	2703	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	258	-8	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	82.8908251188809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAACTGAATTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	156682277	156697482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156682438_156686075_156686302_156695048_156695149_156695265
Isoform_45726_31	chr2	+	2647	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3914	5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGAAAGTCTGGTTCT	NA	False	NA	15	True	AATAAA	-17	NA	172387598	172400532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
Isoform_45729_25	chr2	+	647	2	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGATGGTCGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	75464372	75465116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_75464502_75464598
Isoform_45731_10	chr2	+	2132	10	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	58.4987073825747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712415	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179712878_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
Isoform_45732_3	chr2	+	2151	10	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	42	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	70.7813534767456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	179712426	179727689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_179712878_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
Isoform_45736_4	chr2	+	1355	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9559	-239	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGGAACATGATATTGAT	NA	False	NA	17	True	AATAAA	-25	NA	162873921	162887822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
Isoform_45738_5	chr2	+	1447	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9546	-5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	186.483745940497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162873908	162888056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122
Isoform_4574_3	chr10	-	169	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGAGAGGGAT	6916	False	NA	-3	True	NA	NA	NA	75791665	75791496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_75791500_75791700
Isoform_45740_9	chr2	+	3375	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11871	864	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	43.0122589707714	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	NA	False	NA	29	True	AATAAA	-39	NA	156274902	156382770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382332_156382359
Isoform_45741_3	chr2	+	3377	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11885	855	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	41.4348585130926	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTTATAATTACCTGAC	NA	False	NA	20	True	AATAAA	-30	NA	156274916	156382761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
Isoform_45744_4	chr2	+	2740	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-256	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGGTTCAAATGTTC	4089	False	NA	14	True	AATAAA	-27	NA	16360858	16756500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
Isoform_45745_9	chr2	+	1919	7	NNC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	46.3204418516634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAGTGGAGACTCA	NA	False	NA	8	True	ATTAAA	-15	NA	181007201	181022578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
Isoform_45746_5	chr2	+	535	3	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCCCGTGAGAGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	168847932	168878548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168848074_168864580_168864668_168878241
Isoform_45747_5	chr2	+	1252	3	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATGGTGATTAT	NA	False	NA	NA	False	NA	NA	NA	168847943	168866326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168848074_168864580_168864668_168865291
Isoform_45748_5	chr2	+	3807	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-180	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157265855	157313757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157265917_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45749_4	chr2	+	1247	2	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTGTTAGTCTGTCT	NA	False	NA	3	True	NA	NA	NA	17940976	17952120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_17941086_17950982
Isoform_4575_23	chr10	-	201	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGGGATCGGGGCTGGC	6701	False	NA	NA	False	TTTAAA	-14	NA	75791880	75791679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_75791700_75791900
Isoform_45750_8	chr2	+	3534	9	NNC	ENSMUSG00000033943.16	novel	825	2	NA	NA	-24714	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	30.7235658737719	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAGAGAAAGAAGC	7938	False	NA	13	True	NA	NA	NA	119702994	119757173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859
Isoform_45751_3	chr2	+	1685	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-621	-943	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCTTGTACTGTGAC	7579	False	NA	18	True	AATAAA	-18	NA	30909209	30912651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
Isoform_45752_9	chr2	+	1613	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-548	-942	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	7652	False	NA	19	True	AATAAA	-19	NA	30909282	30912652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
Isoform_45756_5	chr2	+	6295	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11370	-1	intron_retention	FALSE	canonical	3	14	junction_1	70.1929404490857	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	4416	False	NA	8	True	ATTAAA	-18	NA	35500622	35621003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
Isoform_45757_6	chr2	+	3355	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29669	-2	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAACAGCGTTTCTCAC	9368	False	NA	9	True	ATTAAA	-12	NA	156485293	156604873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45758_4	chr2	+	3480	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29681	-34	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAATTAAA	9380	False	NA	NA	False	NA	NA	NA	156485305	156605010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
Isoform_45759_11	chr2	+	1452	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-117	131	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTATATAGCTGTG	7069	False	NA	27	True	AATAAA	-24	NA	127432243	127445906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
Isoform_4576_4	chr10	+	1105	1	Genic_Genomic	ENSMUSG00000049764.9	novel	NA	NA	NA	NA	-24	-4658	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	75868459	75869564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr10_+_75868500_75869600
Isoform_45760_10	chr2	+	1645	5	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	61	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	62.1867148191637	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7340	False	NA	26	True	ATTAAA	-24	NA	125994121	126007197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_125994498_125996465_125996781_126000329_126000474_126001689_126001949_126006646
Isoform_45762_14	chr2	+	934	2	NNC	ENSMUSG00000042745.10	novel	934	2	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGTGACTTCTTGG	4426	False	NA	12	True	ATTAAA	-16	NA	152578174	152579329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_152578671_152578891
Isoform_45765_8	chr2	+	2162	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-806	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGTCAGCTTCTCTGTC	NA	False	NA	16	True	AATAAA	-26	NA	152949581	152993358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
Isoform_45766_6	chr2	+	1823	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-753	-5	intron_retention	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCACTTGTTCACTG	NA	False	NA	11	True	ATTAAA	-12	NA	25132187	25134268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_25132536_25132793
Isoform_45768_3	chr2	+	473	4	NNC	ENSMUSG00000078864.11	novel	1074	3	NA	NA	-1369378	-272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.555171656689	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAACACCATGACTGT	NA	False	NA	NA	False	NA	NA	NA	176031702	177411483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_176031884_177409836_177409964_177410168_177410230_177411379
Isoform_4577_3	chr10	+	1890	1	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTATGAGTATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	76278210	76280100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr10_+_76278200_76280100
Isoform_45772_3	chr2	+	596	2	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	TATAAA	-23	NA	34021423	34027616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34021538_34027134
Isoform_45773_4	chr2	+	728	3	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	TATAAA	-23	NA	34021417	34027616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34021538_34024820_34024947_34027134
Isoform_45774_3	chr2	+	695	2	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTTTTTC	NA	False	NA	NA	False	AATATA	-11	NA	168798158	168800163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168798567_168799876
Isoform_45775_3	chr2	+	920	2	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTTTTTC	NA	False	NA	NA	False	AATATA	-11	NA	168798169	168800163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168798567_168799640
Isoform_45778_5	chr2	+	1150	8	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	61.7962418776747	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAGAATAGTGTTGATGA	2214	False	NA	NA	False	AATAAA	-18	NA	126912589	126939002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
Isoform_45779_4	chr2	+	3776	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	1986	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.5909558735609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157268297	157313758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157268327_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_4578_8	chr11	-	3870	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	21	7	-3	0	multi-exon	FALSE	canonical	2	8	junction_15	27.928964448237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8000	False	NA	-2	True	AATGAA	-15	NA	3143442	3081887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45780_5	chr2	+	3200	2	Antisense	novelGene_ENSMUSG00000050556.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	166971380	166975876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_166971491_166972786
Isoform_45782_5	chr2	+	712	2	Antisense	novelGene_ENSMUSG00000085682.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCAACTTGGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	166338172	166343122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_166338330_166342567
Isoform_45783_3	chr2	+	3828	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	39.339066208764	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157265845	157313755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_157265930_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
Isoform_45786_4	chr2	+	1158	4	NNC	ENSMUSG00000002111.9	novel	544	4	NA	NA	8986	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	12.9614813968157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTGTCTCATTCAAGA	NA	False	NA	22	True	AGTAAA	-23	NA	90936110	90946102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_90936229_90943599_90943791_90944589_90944756_90945419
Isoform_45789_3	chr2	+	174	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	59571192	59571366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_59571200_59571400
Isoform_4579_3	chr11	-	4452	29	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-3	0	intron_retention	TRUE	canonical	2	2	junction_24	29.2501526247544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	8000	False	NA	-1	True	AATGAA	-16	NA	3143442	3081886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45791_4	chr2	-	176	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATAAAGAACATTG	9150	False	NA	1	True	NA	NA	NA	60244408	60244232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_60244200_60244400
Isoform_45794_3	chr2	-	1760	1	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-37	-2435	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGAAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	62242240	62240480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_62240500_62242200
Isoform_45796_3	chr2	-	4130	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	10370044	10365914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_10365900_10370000
Isoform_45797_10	chrX	-	177	1	Intergenic	novelGene_2158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	47758428	47758251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_47758300_47758400
Isoform_45798_4	chr2	+	343	2	Antisense	novelGene_ENSMUSG00000061171.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	65150283	65150646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_65150541_65150560
Isoform_45799_3	chr2	+	637	3	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACACTTGAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	65232645	65237502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_65232653_65236847_65237142_65237166
Isoform_458_17	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6003_+_0_6000
Isoform_4580_3	chr11	-	3954	31	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-3	0	intron_retention	FALSE	canonical	2	8	junction_14	28.1168395568682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8000	False	NA	-2	True	AATGAA	-15	NA	3143442	3081887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45800_5	chr2	-	175	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGTGGCAGCA	NA	False	NA	NA	False	NA	NA	NA	66618766	66618591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_66618600_66618800
Isoform_45801_10	chr2	+	251	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTGAGCATGGTG	NA	False	NA	NA	False	NA	NA	NA	69476059	69476310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_69476100_69476300
Isoform_45803_16	chr2	+	2296	1	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	23	-3672	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	69691928	69694224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_69691900_69694200
Isoform_45805_3	chr2	-	173	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69738200	69738027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_69738000_69738200
Isoform_45807_3	chr2	+	210	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAACCAAGGAACAGAA	6678	False	NA	NA	False	NA	NA	NA	69757198	69757408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_69757200_69757400
Isoform_45808_3	chr2	-	173	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69874041	69873868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_69873900_69874000
Isoform_4581_3	chr11	-	596	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-7	44408	-4	6228	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTATCCAATGTCTTG	8014	False	NA	NA	False	AATACA	-16	NA	3143428	3129339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45811_4	chr2	+	180	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	70638290	70638470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_70638300_70638500
Isoform_45812_10	chr2	+	636	1	Genic_Genomic	ENSMUSG00000041966.19	novel	NA	NA	NA	NA	-9	-21775	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	ACTAAA	-25	NA	70886078	70886714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_70886100_70886700
Isoform_45813_6	chr2	+	208	1	ISM	ENSMUSG00000027012.16	ENSMUST00000149735.2	2248	4	18117	213	-4678	-213	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGAGGGGTGGTTCC	4691	False	NA	NA	False	AATAAA	-6	NA	71060464	71060672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_71060500_71060700
Isoform_45814_23	chr2	+	1449	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAAACTTCCATTCT	NA	False	NA	NA	False	AAAAAG	-13	NA	71178306	71179755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_71178300_71179800
Isoform_45817_11	chr2	+	180	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAATGATA	2029	False	NA	NA	False	NA	NA	NA	71216514	71216694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_71216500_71216700
Isoform_45819_7	chr2	+	424	1	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-9866	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTACA	NA	False	NA	NA	False	NA	NA	NA	71703661	71704085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_71703700_71704100
Isoform_4582_3	chr11	-	667	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-11	44341	7	6295	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCTTTTGAGCATAAG	8010	False	NA	NA	False	AGTAAA	-27	NA	3143432	3129272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45821_4	chr2	+	876	1	Genic_Genomic	ENSMUSG00000087176.2	novel	NA	NA	NA	NA	-83	-32736	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73217230	73218106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_73217200_73218100
Isoform_45822_8	chr2	-	183	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTTTTA	2845	False	NA	NA	False	NA	NA	NA	30592064	30591881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_30591900_30592100
Isoform_45823_4	chr2	+	183	1	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATAGGTT	NA	False	NA	NA	False	NA	NA	NA	73727487	73727670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_73727500_73727700
Isoform_45826_80	chr2	-	538	1	FSM	ENSMUSG00000075279.6	ENSMUST00000173086.2	580	1	1	41	1	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	74422252	74421714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_74421700_74422300
Isoform_45827_561	chr2	-	799	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-8	-41	-8	41	mono-exon	FALSE	NA	NA	NA	NA	NA	561	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	75022174	75021375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_75021400_75022200
Isoform_4583_3	chr11	-	820	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	14	-3	1	3	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTGCACTTTGTTATT	8032	False	NA	NA	False	NA	NA	NA	3143410	3135564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
Isoform_45837_11	chr2	-	2559	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	165	13	165	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGAAACCTCTGC	NA	False	NA	NA	False	NA	NA	NA	75768764	75766205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_75766200_75768800
Isoform_45838_18	chr2	-	2650	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	199	872	199	-872	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTACTGTTCATAATT	NA	False	NA	-13	True	AATAAA	-18	NA	75812112	75809462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_75809500_75812100
Isoform_45839_9	chr2	-	843	1	Genic_Genomic	ENSMUSG00000056436.5	novel	NA	NA	NA	NA	-10	-5676	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76190804	76189961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_76190000_76190800
Isoform_45840_8	chr2	+	917	1	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	5	-12863	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTACAGCACCA	NA	False	NA	NA	False	NA	NA	NA	76200332	76201249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_76200300_76201200
Isoform_45842_6	chr17	-	181	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1245	False	NA	NA	False	NA	NA	NA	56608751	56608570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_56608600_56608800
Isoform_45844_6	chr2	+	206	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80482353	80482559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_80482400_80482600
Isoform_45845_94	chr2	+	1666	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	-43	-321	-43	321	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATATTTTCTAA	NA	False	NA	-4	True	AATAAA	-16	NA	80667441	80669107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_80667400_80669100
Isoform_4585_604	chr11	-	1522	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	10	14	9	-14	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	-15	True	TATAAA	-20	NA	3216383	3199920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
Isoform_45854_6	chr2	+	899	1	NIC	ENSMUSG00000026730.13	novel	1232	6	NA	NA	6	-55584	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	4718	False	NA	NA	False	TATAAA	-17	NA	12928857	12929756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_12928900_12929800
Isoform_45855_3	chr2	-	332	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGATCCCCGACTC	NA	False	NA	NA	False	NA	NA	NA	83524402	83524070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_83524100_83524400
Isoform_45858_3	chr2	+	3053	1	FSM	ENSMUSG00000094125.2	ENSMUST00000179192.2	2493	1	-88	-472	-88	472	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGGATGACAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	83785948	83789001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_83785900_83789000
Isoform_45859_6	chr3	-	751	1	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	60402349	60401598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_60401600_60402300
Isoform_4586_28	chr11	-	1607	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-75	14	-53	-14	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	-15	True	TATAAA	-20	NA	3216468	3199920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
Isoform_45862_3	chr2	-	184	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	13512749	13512565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_13512600_13512700
Isoform_45863_10	chr2	-	217	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTTATTAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-31	NA	84553350	84553133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_84553100_84553400
Isoform_45864_8	chr2	-	2979	1	Antisense	novelGene_ENSMUSG00000034059.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	84571458	84568479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_84568500_84571500
Isoform_45867_4	chr2	-	173	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	87353262	87353089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_87353100_87353300
Isoform_45868_108	chr2	+	725	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-116	-356	-116	356	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	87356372	87357097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_87356400_87357100
Isoform_45871_5	chr2	+	547	1	FSM	ENSMUSG00000091703.3	ENSMUST00000165784.3	470	1	0	-77	0	77	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGAAAAAAAAAATAATCTG	NA	False	NA	NA	False	AATAAA	-17	NA	89978762	89979309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_89978800_89979300
Isoform_45872_3	chr2	+	2646	1	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2173	-10487	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	90509731	90512377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90509700_90512400
Isoform_45874_10	chr2	+	597	1	ISM	ENSMUSG00000040794.6	ENSMUST00000111466.3	1290	2	4063	6	4063	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCATGACTGTGATG	NA	False	NA	26	True	AATAAA	-32	NA	90720266	90720863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_90720300_90720900
Isoform_45875_5	chr2	+	1997	1	NIC	ENSMUSG00000005505.13	novel	2343	4	NA	NA	-5	707	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2359	False	NA	NA	False	NA	NA	NA	90735107	90737104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_90735100_90737100
Isoform_45876_17	chr16	-	220	1	Genic_Genomic	ENSMUSG00000116729.2	novel	NA	NA	NA	NA	-187	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGAAGTATACCCGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	16667749	16667529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr16_-_16667500_16667700
Isoform_45877_4	chr2	-	623	1	FSM	ENSMUSG00000082108.4	ENSMUST00000118208.2	345	1	-237	-41	-237	41	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTGGTCTCACTTGT	NA	False	NA	-14	True	AATAAA	-15	NA	90861704	90861081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_90861100_90861700
Isoform_45878_3	chr2	-	2358	1	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-7	498	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	4294	False	NA	NA	False	NA	NA	NA	90900635	90898277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_90898300_90900600
Isoform_45879_5	chr2	-	189	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGATGGAATCAGCACA	NA	False	NA	NA	False	NA	NA	NA	14270481	14270292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_14270300_14270500
Isoform_45880_28	chr2	-	223	1	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCAGACGGAGTCTCTC	2166	False	NA	NA	False	NA	NA	NA	91200502	91200279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_91200300_91200500
Isoform_45882_4	chr2	-	1075	1	NIC	ENSMUSG00000026707.16	novel	3042	12	NA	NA	2	-1015	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	948	False	NA	NA	False	NA	NA	NA	15054121	15053046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_15053000_15054100
Isoform_45884_14	chr2	-	1320	1	NIC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	4	-440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91480120	91478800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_91478800_91480100
Isoform_45885_7	chr2	-	213	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGACCTTGATATGT	NA	False	NA	NA	False	NA	NA	NA	91564974	91564761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_91564800_91565000
Isoform_45890_4	chr6	+	177	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12831373	12831550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_12831400_12831600
Isoform_45891_4	chr2	-	3596	1	Genic_Genomic	ENSMUSG00000068742.12	novel	NA	NA	NA	NA	-34	-3578	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAATAAAATCTA	NA	False	NA	NA	False	TTTAAA	-16	NA	92264422	92260826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_92260800_92264400
Isoform_45892_3	chr2	+	2635	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGC	NA	False	NA	NA	False	NA	NA	NA	93021119	93023754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_93021100_93023800
Isoform_45893_18	chr2	-	1290	1	FSM	ENSMUSG00000087006.4	ENSMUST00000148314.3	1240	1	-53	3	-53	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTCCGGGCTTTGGA	NA	False	NA	-6	True	AATAAA	-20	NA	93787447	93786157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93786200_93787400
Isoform_45894_14	chr2	-	1354	1	FSM	ENSMUSG00000087006.4	ENSMUST00000099689.5	1386	1	36	-4	36	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTCCGGGCTTTGGAC	NA	False	NA	-5	True	AATAAA	-21	NA	93787510	93786156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_93786200_93787500
Isoform_45895_317	chr2	-	1148	1	FSM	ENSMUSG00000081476.2	ENSMUST00000117207.2	597	1	-26	-525	-26	525	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAATATCC	NA	False	NA	NA	False	AATAAA	-18	NA	94215469	94214321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_94214300_94215500
Isoform_45899_47	chr1	-	178	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTATAATATTAA	NA	False	NA	NA	False	NA	NA	NA	185115566	185115388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_185115400_185115600
Isoform_45900_6	chr2	+	682	1	NIC	ENSMUSG00000027164.9	novel	1949	2	NA	NA	2	-7123	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101508775	101509457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_101508800_101509500
Isoform_45902_50	chr2	-	2484	1	FSM	ENSMUSG00000075012.5	ENSMUST00000099678.5	3134	1	642	8	642	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTAATTCATGAGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	102282202	102279718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_102279700_102282200
Isoform_45904_4	chr2	-	998	1	NIC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-12	-32858	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102903819	102902821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_102902800_102903800
Isoform_45905_3	chr2	-	212	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTTTGCTGTATATA	8874	False	NA	NA	False	NA	NA	NA	102914859	102914647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_102914600_102914900
Isoform_4591_9	chr11	-	923	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7429	1214	4105	-1214	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACTCGGGACTAC	NA	False	NA	-15	True	GATAAA	-23	NA	3298712	3295469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
Isoform_45910_9	chr2	-	174	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16076375	16076201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_16076200_16076400
Isoform_45911_7	chr2	+	180	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5105	False	NA	NA	False	NA	NA	NA	103611539	103611719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_103611500_103611700
Isoform_45914_8	chr2	+	2843	1	NIC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-6026	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTTTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	104389526	104392369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_104389500_104392400
Isoform_45916_4	chr2	+	165	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTCATTCAT	NA	False	NA	NA	False	NA	NA	NA	104717908	104718073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_104717900_104718100
Isoform_45919_3	chr2	+	3187	1	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	43	-57691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	105735025	105738212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_105735000_105738200
Isoform_4592_6	chr11	-	2136	5	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	7429	1	4105	-1	3prime_fragment	FALSE	canonical	3	202	junction_1	18.3354165483089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	3298712	3294256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593
Isoform_45920_4	chr2	+	486	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106801234	106801720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_106801200_106801700
Isoform_45921_5	chr2	-	417	1	FSM	ENSMUSG00000083424.4	ENSMUST00000121779.2	333	1	-49	-35	-49	35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	AATAAA	-16	NA	108705652	108705235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_108705200_108705700
Isoform_45922_8	chr2	+	176	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	109591430	109591606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_109591400_109591600
Isoform_45923_5	chr2	-	196	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTATTTATCTACA	NA	False	NA	NA	False	NA	NA	NA	109731938	109731742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_109731700_109731900
Isoform_45924_8	chr2	+	191	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111927807	111927998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_111927800_111928000
Isoform_45925_3	chr2	+	176	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAATACTCAAT	NA	False	NA	NA	False	NA	NA	NA	111994409	111994585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_111994400_111994600
Isoform_45927_71	chr2	+	453	1	FSM	ENSMUSG00000082580.4	ENSMUST00000122241.2	312	1	-11	-130	-11	130	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1039	False	NA	NA	False	AATAAA	-17	NA	3551782	3552235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_3551800_3552200
Isoform_45929_3	chr2	+	160	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	17823750	17823910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_17823800_17823900
Isoform_4593_48	chr11	-	2466	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	4	1223	4	-1223	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCAAGAGTCTGTTACT	9818	False	NA	-24	True	GATAAA	-14	NA	3321372	3295478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_45932_14	chr2	-	895	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	4	417	4	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTAAGATTTGTTT	7164	False	NA	NA	False	AAGAAA	-15	NA	113751482	113750587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_113750600_113751500
Isoform_45936_3	chr2	-	521	1	NIC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	8	-2352	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114031913	114031392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_114031400_114031900
Isoform_45937_5	chr2	+	184	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17850489	17850673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_17850500_17850700
Isoform_45939_17	chr2	+	1234	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17940954	17942188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_17941000_17942200
Isoform_45941_8	chr2	+	556	1	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	21246	0	12203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCATGGCTTA	NA	False	NA	44	True	ATTAAA	-22	NA	117101465	117102021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_117101500_117102000
Isoform_45944_3	chr2	+	823	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGGAGAAGGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118385468	118386291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_118385500_118386300
Isoform_45945_22	chr2	+	2097	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	-10	3	-10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGCAACTCTGTAATT	9702	False	NA	5	True	AATAAA	-16	NA	118756966	118759063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_118757000_118759100
Isoform_45946_8	chr2	+	1003	1	NIC	ENSMUSG00000027323.11	novel	779	6	NA	NA	38	-8405	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAATCTAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	118943335	118944338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_118943300_118944300
Isoform_45951_7	chr2	+	3201	1	NIC	ENSMUSG00000085438.2	novel	1381	3	NA	NA	27	-3216	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119424810	119428011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119424800_119428000
Isoform_45952_5	chr2	-	2290	1	ISM	ENSMUSG00000054057.3	ENSMUST00000066163.3	3217	2	10251	4	1274	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAATAGCCTACTT	NA	False	NA	-27	True	ATTAAA	-13	NA	18032297	18030007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_18030000_18032300
Isoform_45953_3	chr2	-	3062	1	NIC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	505	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAGCCTACTTTGC	NA	False	NA	-24	True	ATTAAA	-16	NA	18033066	18030004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_18030000_18033100
Isoform_45955_5	chr2	+	777	1	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTACTTGTTTGAAGG	4479	False	NA	NA	False	NA	NA	NA	18032444	18033221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_18032400_18033200
Isoform_45956_19	chr2	+	1469	1	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-5	-1410	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTGTCTCGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	119857979	119859448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_119858000_119859400
Isoform_4596_50	chr11	-	2445	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	27	1221	-14	-1221	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	9841	False	NA	-22	True	GATAAA	-16	NA	3321349	3295476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_45960_3	chr2	+	2223	2	NNC	ENSMUSG00000027287.15	novel	751	8	NA	NA	1	-15035	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	120398178	120400421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_120399409_120399428
Isoform_45962_10	chr2	-	174	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAATCCTCCA	NA	False	NA	NA	False	NA	NA	NA	18093185	18093011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_18093000_18093200
Isoform_45963_3	chr2	-	2539	1	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	0	-352	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGGGACAACAA	6114	False	NA	NA	False	AATATA	-23	NA	120561999	120559460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_120559500_120562000
Isoform_45964_3	chr2	-	2453	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-34	637	-34	-637	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGTAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120971168	120968715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120968700_120971200
Isoform_45965_66	chr2	-	2142	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-11	925	-11	-925	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGACCTAAGGGTGAAT	NA	False	NA	-6	True	AATAAA	-17	NA	120971145	120969003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_120969000_120971100
Isoform_45968_4	chr2	-	674	1	NIC	ENSMUSG00000048222.4	novel	3362	7	NA	NA	46	-13113	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATCAAAATATAAGA	9241	False	NA	NA	False	NA	NA	NA	121304502	121303828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_121303800_121304500
Isoform_45969_3	chr2	+	267	1	NIC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	-3	-25754	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121337249	121337516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_121337200_121337500
Isoform_45970_5	chr4	+	180	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4898	False	NA	NA	False	NA	NA	NA	32764015	32764195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_32764000_32764200
Isoform_45971_3	chr2	-	185	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAATTTGTTT	3707	False	NA	NA	False	NA	NA	NA	125084967	125084782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_125084800_125085000
Isoform_45973_11	chr2	+	1702	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	-12	1	-12	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTTTGTCTAATAGC	NA	False	NA	17	True	AATAAA	-17	NA	125515002	125516704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_125515000_125516700
Isoform_45975_41	chr2	+	192	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	126431359	126431551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_126431400_126431600
Isoform_45976_12	chr2	-	232	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATTAACTTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	126521092	126520860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_126520900_126521100
Isoform_45978_3	chr2	-	211	1	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAACTTTTATTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	126537162	126536951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_126537000_126537200
Isoform_45979_3	chr2	+	170	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	126988021	126988191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_126988000_126988200
Isoform_4598_17	chr11	-	3506	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-14	201	-14	-201	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGGCCACTTTTCTT	9800	False	NA	-17	True	AATGAA	-14	NA	3321390	3294456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_45980_3	chr2	-	393	1	NIC	ENSMUSG00000044145.3	novel	1266	2	NA	NA	-10	-5305	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-27	NA	127050184	127049791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_127049800_127050200
Isoform_45982_4	chr2	+	2117	1	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	36	-7024	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACCAAGAT	2435	False	NA	NA	False	NA	NA	NA	127089928	127092045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_127089900_127092000
Isoform_45983_3	chr2	+	1504	1	Genic_Genomic	ENSMUSG00000051154.12	novel	NA	NA	NA	NA	-178	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTGACAGCAGATTAT	-11	True	NA	NA	False	AATAAA	-16	NA	18677016	18678520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_18677000_18678500
Isoform_45985_7	chr2	+	1919	1	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	10	-29494	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128660232	128662151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_128660200_128662200
Isoform_45986_5	chr2	-	1821	1	FSM	ENSMUSG00000074807.4	ENSMUST00000099385.3	1133	1	-296	-392	23	392	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTGAGTATTGCTGTT	9146	False	NA	NA	False	AATAAA	-22	NA	128809941	128808120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_128808100_128809900
Isoform_45988_4	chr2	+	2591	1	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	-4	466	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128907900	128910491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_128907900_128910500
Isoform_45989_4	chr2	-	253	1	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGGAAAAATACAAAAAG	NA	False	NA	NA	False	AATACA	-24	NA	129023023	129022770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_129022800_129023000
Isoform_4599_17	chr11	-	3709	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-17	1	-17	-1	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	9797	False	NA	-7	True	AATAAA	-18	NA	3321393	3294256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
Isoform_45990_3	chr2	-	3167	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-66	-1158	-66	1158	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTAAAAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	129041180	129038013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_129038000_129041200
Isoform_45992_45	chr2	-	1969	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-27	1	-27	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATTTGTGAGGAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	129041141	129039172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_129039200_129041100
Isoform_45995_4	chr2	-	1062	1	Genic_Genomic	ENSMUSG00000026737.13	novel	NA	NA	NA	NA	-151	-149719	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAAGCAACG	NA	False	NA	NA	False	NA	NA	NA	19003088	19002026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_19002000_19003100
Isoform_45997_3	chr2	+	895	1	Genic_Genomic	ENSMUSG00000085498.2	novel	NA	NA	NA	NA	-1	-9563	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAATCATGAA	9127	False	NA	NA	False	AAAACA	-42	NA	129139288	129140183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_129139300_129140200
Isoform_45998_4	chr2	+	2781	1	ISM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	28974	16	28974	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGCTATTTGAAAATGAG	NA	False	NA	18	True	AATAAA	-25	NA	129671410	129674191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_129671400_129674200
Isoform_46_70	ERCC-00044	+	1147	1	FSM	ERCC-00044A	DQ459424	1149	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	AAAAAG	-26	NA	1	1148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00044_+_0_1100
Isoform_46000_31	chr2	-	2796	1	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	281	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	130021286	130018490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_130018500_130021300
Isoform_46003_16	chr2	+	209	1	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATTTGGCCTATGTTA	7535	False	NA	NA	False	TTTAAA	-11	NA	19308123	19308332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_19308100_19308300
Isoform_46007_3	chr2	-	183	1	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3549	False	NA	NA	False	NA	NA	NA	130664186	130664003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_130664000_130664200
Isoform_46008_3	chr2	-	3005	1	NIC	ENSMUSG00000027309.19	novel	472	4	NA	NA	32	-90504	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	130748294	130745289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_130745300_130748300
Isoform_46009_3	chr2	-	2298	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	480	2108	480	-2108	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGCATCCTTCATGGTC	3646	False	NA	-1	True	AATAAA	-44	NA	131021507	131019209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_131019200_131021500
Isoform_4601_23	chr11	-	3512	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	1	1	-1	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	3359173	3294256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_46011_3	chr2	+	2827	1	NIC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-2	-8774	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATAAATAATAAATCTT	7262	False	NA	NA	False	NA	NA	NA	131075984	131078811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_131076000_131078800
Isoform_46012_4	chr2	+	175	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19410981	19411156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_19411000_19411200
Isoform_46015_10	chr2	+	778	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-547	-7746	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCCCCCCCCATTTCAT	-2	True	NA	NA	False	AATAAA	-25	NA	132094729	132095507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_132094700_132095500
Isoform_46016_4	chr2	+	2734	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-551	-5794	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACCAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	132094725	132097459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_132094700_132097500
Isoform_46017_22	chr2	+	2852	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-21	1	-21	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTCTGGGTAGAGTGG	2479	False	NA	3	True	AATAAA	-14	NA	19662541	19665393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_19662500_19665400
Isoform_46018_7	chr2	-	177	1	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGATTCTACCTTG	NA	False	NA	NA	False	NA	NA	NA	132131032	132130855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_132130900_132131000
Isoform_4602_66	chr11	-	2292	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	1221	1	-1221	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	-22	True	GATAAA	-16	NA	3359173	3295476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_46022_4	chr2	+	209	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCAAGCCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134371664	134371873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_134371700_134371900
Isoform_46023_57	chr2	-	1580	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	-18	-755	-18	755	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	134605568	134603988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_134604000_134605600
Isoform_46025_3	chr2	+	259	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	340	-119	340	119	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	134646208	134646467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_134646200_134646500
Isoform_46027_10	chr2	+	522	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAGGAAAGAGAAACA	NA	False	NA	NA	False	NA	NA	NA	135488443	135488965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_135488400_135489000
Isoform_46028_4	chr2	+	173	1	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAAGTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	20162153	20162326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_20162200_20162300
Isoform_46030_4	chr2	-	4230	1	NIC	ENSMUSG00000051379.13	novel	3977	3	NA	NA	8	-7907	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140513381	140509151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_140509200_140513400
Isoform_46031_4	chr2	-	183	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGTCCCATTG	NA	False	NA	NA	False	AATAAA	-5	NA	141019414	141019231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_141019200_141019400
Isoform_46032_6	chr2	-	176	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGATAAAAAA	5314	False	NA	NA	False	NA	NA	NA	142832908	142832732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_142832700_142832900
Isoform_46036_19	chr18	-	916	1	FSM	ENSMUSG00000091957.4	ENSMUST00000076842.7	879	1	-10	-27	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAAGTCTGCTGAAAA	7424	False	NA	NA	False	AATAAA	-1	NA	61393042	61392126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr18_-_61392100_61393000
Isoform_46038_3	chr8	-	537	1	Intergenic	novelGene_1995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	129473585	129473048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_129473000_129473600
Isoform_4604_13	chr11	-	2344	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-52	1222	-37	-1222	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAGAGTCTGTTACTC	NA	False	NA	-23	True	GATAAA	-15	NA	3359226	3295477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_46041_5	chr2	+	442	1	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	15	-6686	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145745196	145745638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_145745200_145745600
Isoform_46042_6	chr2	-	223	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGGTGACTTTAGC	NA	False	NA	NA	False	NA	NA	NA	146047393	146047170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_146047200_146047400
Isoform_46043_5	chr2	-	3684	1	FSM	ENSMUSG00000074743.5	ENSMUST00000099270.5	3723	1	35	4	35	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTCATCTCCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	148250073	148246389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_148246400_148250100
Isoform_46044_10	chr2	+	1169	1	NIC	ENSMUSG00000036992.11	novel	1116	3	NA	NA	30	-2203	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	148514575	148515744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_148514600_148515700
Isoform_46046_3	chr2	+	248	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAGCCCATATCAGAC	NA	False	NA	NA	False	NA	NA	NA	150474318	150474566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_150474300_150474600
Isoform_46047_14	chr2	-	5188	1	Genic_Genomic	ENSMUSG00000086563.2	novel	NA	NA	NA	NA	-32	2815	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150548828	150543640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_150543600_150548800
Isoform_46049_6	chr2	-	3659	1	NIC	ENSMUSG00000068115.14	novel	658	5	NA	NA	20	-61581	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	150881282	150877623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_150877600_150881300
Isoform_46051_5	chr2	-	203	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTGGGAAACGGCATGC	NA	False	NA	NA	False	NA	NA	NA	151404827	151404624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_151404600_151404800
Isoform_46052_4	chr2	+	540	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152019652	152020192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_152019700_152020200
Isoform_46053_5	chr2	-	220	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	209	-37	209	37	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGGTCTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	152027393	152027173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152027200_152027400
Isoform_46054_4	chr2	-	452	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	-26	-34	-26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAAAAAGTGGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	152027628	152027176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152027200_152027600
Isoform_46060_3	chr2	+	180	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152196674	152196854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_152196700_152196900
Isoform_46061_3	chr2	-	2817	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	343	1293	326	-1290	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGCCCTGTGGTTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	152239640	152236823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152236800_152239600
Isoform_46062_287	chr2	-	2836	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	237	0	237	0	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256710	152253874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152253900_152256700
Isoform_46066_26	chr2	-	3044	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	29	0	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256918	152253874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_152253900_152256900
Isoform_4607_7	chr11	-	1375	5	ISM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	41	13102	41	894	5prime_fragment	FALSE	canonical	3	97	junction_3	84.1616747694579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	3359133	3307357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_46074_3	chr2	+	176	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTTATTTTTTTAT	3716	False	NA	3	True	NA	NA	NA	152419484	152419660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_152419500_152419700
Isoform_46075_4	chr2	+	4324	1	NIC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	2	-9628	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152511409	152515733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_152511400_152515700
Isoform_46076_7	chr2	+	902	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	5	5	5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAATCGGGGTGTT	NA	False	NA	96	True	AATAAA	-18	NA	152528959	152529861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152529000_152529900
Isoform_46077_18	chr2	+	719	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	109	84	109	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTGTGTCTGTATG	NA	False	NA	17	True	TATAAA	-13	NA	152529063	152529782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152529100_152529800
Isoform_4608_4	chr11	-	1192	5	ISM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	13325	1	671	5prime_fragment	FALSE	canonical	3	97	junction_3	84.1616747694579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGCCCCACTTAAATG	NA	False	NA	NA	False	NA	NA	NA	3359173	3307580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
Isoform_46080_49	chr2	+	771	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	136	5	136	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAATCGGGGTGTT	NA	False	NA	96	True	AATAAA	-18	NA	152529090	152529861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_152529100_152529900
Isoform_46083_22	chr2	-	3029	1	FSM	ENSMUSG00000074671.7	ENSMUST00000099194.4	3072	1	34	9	34	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATAATTTAGGTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	153067327	153064298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_153064300_153067300
Isoform_46085_5	chr2	-	220	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGATTCTGCTTTTTC	NA	False	NA	NA	False	AAAAAG	-12	NA	153123558	153123338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_153123300_153123600
Isoform_4609_4	chr11	-	2884	8	FSM	ENSMUSG00000020448.17	ENSMUST00000064364.3	2906	8	23	-1	-6	1	multi-exon	FALSE	canonical	0	0	junction_6	67.856390973278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6838	False	NA	-4	True	ATTAAA	-15	NA	3402340	3365980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3388204_3388324_3402208
Isoform_46090_3	chr2	+	565	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	338	-468	338	468	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ATTAAA	-32	NA	153668428	153668993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_153668400_153669000
Isoform_46091_7	chr2	+	173	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	154237380	154237553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_154237400_154237600
Isoform_46092_7	chr2	-	898	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	AAAAAG	-8	NA	154263234	154262336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_154262300_154263200
Isoform_46093_8	chr2	+	1335	1	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-2	-66950	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAACAAAAAAAT	5315	False	NA	NA	False	NA	NA	NA	154278412	154279747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_154278400_154279700
Isoform_46098_9	chr2	-	2541	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	-7679	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAACA	9541	False	NA	NA	False	NA	NA	NA	154411773	154409232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_154409200_154411800
Isoform_461_1223	SIRV6	+	484	4	FSM	SIRV6A	SIRV609	485	4	1	0	1	0	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1138	2120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
Isoform_4610_127	chr11	-	2742	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	45	0	16	0	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6860	False	NA	-5	True	ATTAAA	-14	NA	3402318	3365981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
Isoform_46100_9	chr2	+	207	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCTATCCTATAACTT	NA	False	NA	NA	False	NA	NA	NA	154520610	154520817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_154520600_154520800
Isoform_46103_5	chr2	+	183	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154782717	154782900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_154782700_154782900
Isoform_46107_3	chr2	+	2284	1	NIC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	0	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	4067	False	NA	NA	False	NA	NA	NA	155223759	155226043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_155223800_155226000
Isoform_46108_5	chrX	+	175	1	Intergenic	novelGene_2166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	71631927	71632102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_71631900_71632100
Isoform_46109_3	chr2	+	178	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATAACTGA	3324	False	NA	NA	False	NA	NA	NA	155982931	155983109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_155982900_155983100
Isoform_4611_70	chr11	-	2764	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	23	0	-6	0	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6838	False	NA	-5	True	ATTAAA	-14	NA	3402340	3365981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
Isoform_46110_3	chr2	+	911	1	NIC	ENSMUSG00000067847.14	novel	569	3	NA	NA	1	-639	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAATAATAATAAT	6546	False	NA	NA	False	NA	NA	NA	155986153	155987064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_155986200_155987100
Isoform_46111_24	chr2	-	1636	1	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-3	24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAACAGAAGAGAGAAA	NA	False	NA	-8	True	AATAGA	-32	NA	156022090	156020454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156020500_156022100
Isoform_46112_3	chr11	+	164	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	79	False	NA	NA	False	NA	NA	NA	87932027	87932191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_87932000_87932200
Isoform_46113_56	chr2	-	194	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGCAATCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	156058643	156058449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_156058400_156058600
Isoform_46116_31	chr2	-	663	1	NIC	ENSMUSG00000046229.11	novel	803	2	NA	NA	239	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154428	156153765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156153800_156154400
Isoform_46118_9	chr2	-	4895	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	18	2	18	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGGGCGTCTCTACT	NA	False	NA	NA	False	AATAAA	-15	NA	156234881	156229986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156230000_156234900
Isoform_4612_3	chr11	-	2521	6	FSM	ENSMUSG00000020448.17	ENSMUST00000144055.2	643	6	16	-1894	16	0	multi-exon	FALSE	canonical	1	1	junction_5	57.6485906159032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6860	False	NA	-5	True	ATTAAA	-14	NA	3402318	3365981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3402208
Isoform_46121_9	chr2	-	2524	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192590.2	339	1	-132	-2053	18	2053	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGTATACTCTGTTAG	NA	False	NA	NA	False	ATTAAA	-42	NA	156234881	156232357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_156232400_156234900
Isoform_46122_3	chr2	+	2614	1	NIC	ENSMUSG00000061689.16	novel	981	8	NA	NA	8	-25400	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	156562997	156565611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_156563000_156565600
Isoform_46124_13	chr2	-	887	1	NIC	ENSMUSG00000085741.9	novel	904	2	NA	NA	4	-7957	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156704879	156703992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156704000_156704900
Isoform_46125_4	chr4	-	177	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATCCT	NA	False	NA	NA	False	NA	NA	NA	146388401	146388224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_146388200_146388400
Isoform_46126_3	chr2	-	3283	1	NIC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	1	-1052	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGCCCAATTA	8135	False	NA	NA	False	NA	NA	NA	156848994	156845711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_156845700_156849000
Isoform_46128_4	chr2	-	192	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9309	False	NA	NA	False	NA	NA	NA	156944086	156943894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_156943900_156944100
Isoform_46129_5	chr2	+	174	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAGTAAGT	NA	False	NA	NA	False	NA	NA	NA	4717200	4717374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_4717200_4717400
Isoform_4613_12	chr11	-	2775	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	55.8161267018771	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6809	False	NA	-4	True	ATTAAA	-15	NA	3402369	3365980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382399_3382621_3402208
Isoform_46130_25	chr17	+	182	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACACT	NA	False	NA	NA	False	NA	NA	NA	53818532	53818714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_53818500_53818700
Isoform_46131_7	chr4	-	181	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139267862	139267681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_139267700_139267900
Isoform_46132_8	chr2	-	2336	1	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	21	-17307	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	157870332	157867996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_157868000_157870300
Isoform_46134_3	chr2	+	806	1	FSM	ENSMUSG00000065840.3	ENSMUST00000083906.3	133	1	0	-673	0	673	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATGAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	158220141	158220947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_158220100_158220900
Isoform_46136_3	chr2	+	1115	1	NIC	ENSMUSG00000027412.13	novel	3365	19	NA	NA	-5	-14457	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	160730085	160731200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_160730100_160731200
Isoform_46137_3	chr2	-	751	1	NIC	ENSMUSG00000057133.15	novel	3092	17	NA	NA	-14	-73255	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGGAATATGAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	160950956	160950205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_160950200_160951000
Isoform_46138_4	chr2	+	765	1	NIC	ENSMUSG00000084919.2	novel	630	3	NA	NA	0	-2368	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTAAAAAAATTATAATA	NA	False	NA	NA	False	TATAAA	-18	NA	162232732	162233497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_162232700_162233500
Isoform_46142_3	chr19	-	338	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCGCCCCGAAAAAAAAAA	NA	False	NA	-23	True	AATAAA	-16	NA	42367387	42367049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_42367000_42367400
Isoform_46147_3	chr2	-	180	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTGGCATTATATC	NA	False	NA	-5	True	NA	NA	NA	163358957	163358777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_163358800_163359000
Isoform_46149_3	chr2	+	170	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	163490295	163490465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_163490300_163490500
Isoform_46154_3	chr2	+	173	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGTCTGAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	163964689	163964862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_163964700_163964900
Isoform_46155_3	chr2	+	2841	1	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	78538	8	42475	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACAGTCTGTCCCCTT	NA	False	NA	10	True	AATAAA	-10	NA	163994595	163997436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_163994600_163997400
Isoform_46157_3	chr2	-	2239	1	NIC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	0	-15048	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACCAAAACAC	NA	False	NA	NA	False	NA	NA	NA	164285106	164282867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_164282900_164285100
Isoform_46158_3	chr2	-	429	1	NIC	ENSMUSG00000086453.8	novel	676	6	NA	NA	17	-14957	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAACCAAAAAAAA	2109	False	NA	NA	False	NA	NA	NA	164611569	164611140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_164611100_164611600
Isoform_46163_13	chr16	+	176	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20170942	20171118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_20170900_20171100
Isoform_46164_13	chr2	+	173	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4379	False	NA	NA	False	NA	NA	NA	164719706	164719879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_164719700_164719900
Isoform_46165_26	chr2	-	1677	1	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164721689	164720012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_164720000_164721700
Isoform_46166_5	chr2	+	2066	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	11	-1677	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAGAA	5960	False	NA	NA	False	NA	NA	NA	164721287	164723353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164721300_164723400
Isoform_46167_7	chr2	+	1361	1	NIC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	34	-6811	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAAAAGAGAAGAGAA	7274	False	NA	NA	False	NA	NA	NA	164753307	164754668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_164753300_164754700
Isoform_46169_4	chr2	-	3222	1	Genic_Genomic	ENSMUSG00000039725.7	novel	NA	NA	NA	NA	-22	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAAAAAGAACAGTTTT	NA	False	NA	-32	True	NA	NA	NA	165335266	165332044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_165332000_165335300
Isoform_4617_4	chr11	-	2737	6	NNC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.5163810756054	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6844	False	NA	-5	True	ATTAAA	-14	NA	3402334	3365981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_3368088_3369861_3369980_3375281_3375335_3376565_3376679_3382399_3382621_3402208
Isoform_46171_8	chr2	+	1179	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165652161	165653340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_165652200_165653300
Isoform_46172_4	chr2	+	187	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGGGCCAGAGCTGG	5381	False	NA	NA	False	NA	NA	NA	165735471	165735658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_165735500_165735700
Isoform_46174_25	chr2	-	231	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAATTCAA	NA	False	NA	NA	False	NA	NA	NA	165768104	165767873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_165767900_165768100
Isoform_46175_3	chr2	-	851	1	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4887424	4886573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_4886600_4887400
Isoform_46177_26	chr2	-	176	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATTGTT	NA	False	NA	NA	False	NA	NA	NA	165957533	165957357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_165957400_165957500
Isoform_46178_3	chr2	-	2108	2	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	-2	True	NA	NA	NA	166096632	166094480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_166096201_166096244
Isoform_4618_7	chr11	-	3350	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	38	-2	-2	2	multi-exon	FALSE	canonical	2	9	junction_21	27.3941583060523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTTTCTCTGCTGTC	8175	False	NA	-4	True	GATAAA	-19	NA	3489254	3467520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
Isoform_46180_5	chr2	+	2377	1	NIC	ENSMUSG00000042854.10	novel	4426	2	NA	NA	10	238	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATATCTTCTTA	NA	False	NA	3	True	AAAACA	-13	NA	166635696	166638073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_166635700_166638100
Isoform_46181_10	chr2	+	2666	1	Genic_Genomic	ENSMUSG00000074582.11	novel	NA	NA	NA	NA	-54	-40772	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAATATAATCCGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	166647453	166650119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_166647500_166650100
Isoform_46182_5	chr2	-	180	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166850310	166850130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_166850100_166850300
Isoform_4619_27	chr11	-	3444	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8135	False	NA	-7	True	GATAAA	-16	NA	3489294	3467523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
Isoform_46190_4	chr15	-	174	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAAAAAGATGAGTGC	NA	False	NA	NA	False	NA	NA	NA	70822036	70821862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_70821900_70822000
Isoform_46191_6	chr2	+	1404	1	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	0	-2704	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24852433	24853837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_24852400_24853800
Isoform_46192_4	chr2	+	229	1	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCTAACACTGCTATTT	NA	False	NA	NA	False	NA	NA	NA	167297625	167297854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_167297600_167297900
Isoform_46193_3	chr2	-	936	1	NIC	ENSMUSG00000036850.5	novel	776	2	NA	NA	44	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGTGTTTTGAATCAA	NA	False	NA	-5	True	ATTAAA	-19	NA	24865066	24864130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_24864100_24865100
Isoform_46194_3	chr2	+	875	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	299	-22346	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTCTAGATTGTGTG	NA	False	NA	NA	False	AATAAA	-32	NA	167334863	167335738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_167334900_167335700
Isoform_46195_11	chr2	+	2488	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	-11	-10242	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	167345354	167347842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_167345400_167347800
Isoform_46198_13	chr2	+	1444	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	52	8	52	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTTTGGGGGCAG	NA	False	NA	24	True	AATAAA	-18	NA	167530886	167532330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_167530900_167532300
Isoform_4620_30	chr11	-	3403	22	NIC	ENSMUSG00000020439.18	novel	3348	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8178	False	NA	-5	True	GATAAA	-18	NA	3489251	3467521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
Isoform_46200_2119	chr2	+	550	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	-34	-33	-34	33	mono-exon	FALSE	NA	NA	NA	NA	NA	2119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-16	NA	24875961	24876511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_24876000_24876500
Isoform_46204_4	chr2	+	202	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTAAATGCCATAACACA	NA	False	NA	NA	False	NA	NA	NA	167999071	167999273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_167999100_167999300
Isoform_46205_14	chr2	-	745	1	NIC	ENSMUSG00000093752.2	novel	5288	12	NA	NA	2	-48632	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTCTCCG	NA	False	NA	NA	False	NA	NA	NA	168072282	168071537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_168071500_168072300
Isoform_46209_83	chr2	+	1966	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	1	6	1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTGAGTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	168072542	168074508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_168072500_168074500
Isoform_4621_90	chr11	-	3296	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	38	1	-2	-1	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8175	False	NA	-7	True	GATAAA	-16	NA	3489254	3467523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
Isoform_46210_34	chr2	-	263	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAATAGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	168153070	168152807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_168152800_168153100
Isoform_46211_3	chr2	+	451	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168153181	168153632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168153200_168153600
Isoform_46216_7	chr2	+	2604	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	-30	8	-30	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACTGGTTTTAA	7921	False	NA	NA	False	AATAAA	-25	NA	25070739	25073343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25070700_25073300
Isoform_46217_3	chr2	+	229	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168633587	168633816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168633600_168633800
Isoform_46218_6	chr2	+	249	1	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTGGGTCAGTTCCT	6050	False	NA	NA	False	NA	NA	NA	168676567	168676816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168676600_168676800
Isoform_46219_4	chr2	-	334	1	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	2338	False	NA	NA	False	NA	NA	NA	168720210	168719876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_168719900_168720200
Isoform_46220_5	chr2	-	229	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATCTATTTAATAATT	NA	False	NA	NA	False	NA	NA	NA	25082906	25082677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_25082700_25082900
Isoform_46222_3	chr2	-	3037	1	NIC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	751	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACCCACCCACCTTCT	9140	False	NA	NA	False	AATAAA	-11	NA	25086020	25082983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_25083000_25086000
Isoform_46223_6	chr2	+	179	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	168792882	168793061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_168792900_168793100
Isoform_46224_45	chr2	+	2355	1	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCAGC	NA	False	NA	NA	False	AAAAAG	-30	NA	168847934	168850289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_168847900_168850300
Isoform_4623_8	chr11	-	3129	20	FSM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	-14	2	-1	-2	multi-exon	FALSE	canonical	3	4	junction_1	23.2906482011302	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCCTGACTTTTCTCTGC	8176	False	NA	-8	True	GATAAA	-15	NA	3489253	3467524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
Isoform_46237_2072	chr2	-	292	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	-31	-90	-31	90	mono-exon	FALSE	NA	NA	NA	NA	NA	2072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	172351642	172351350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_172351400_172351600
Isoform_46240_8	chr2	+	701	1	Genic_Genomic	ENSMUSG00000028640.12	novel	NA	NA	NA	NA	-13	-3238	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172391499	172392200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_172391500_172392200
Isoform_46241_39	chr2	+	552	1	NIC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	136	-3238	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172391648	172392200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_172391600_172392200
Isoform_46243_5	chr4	+	178	2	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAACCTAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	136112285	136133456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_136112444_136133436
Isoform_46244_8	chr2	+	835	1	NIC	ENSMUSG00000027519.11	novel	7045	6	NA	NA	-7	-40471	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTCCAATAA	NA	False	NA	NA	False	NA	NA	NA	173501641	173502476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_173501600_173502500
Isoform_46246_14	chr2	+	962	1	NIC	ENSMUSG00000027522.16	novel	356	4	NA	NA	0	-13455	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	173918110	173919072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_173918100_173919100
Isoform_46247_6	chr2	-	622	1	FSM	ENSMUSG00000065521.3	ENSMUST00000083587.3	79	1	69	-612	69	612	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATTGTTTGGTGTTG	NA	False	NA	NA	False	AATAAA	-8	NA	174108849	174108227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_174108200_174108800
Isoform_46248_7	chr2	-	466	1	NIC	ENSMUSG00000086537.8	novel	2248	5	NA	NA	0	-10618	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAAAAAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	174137229	174136763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_174136800_174137200
Isoform_4625_4	chr11	-	2284	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	776	-1	776	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	14	False	NA	NA	False	AATAAA	-17	NA	3863888	3857020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3857985_3862568
Isoform_46250_33	chr2	+	852	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATGCTCTGAATTGCC	NA	False	NA	4	True	ATTAAA	-14	NA	25145450	25146302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25145400_25146300
Isoform_46251_3	chr2	+	1082	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	0	-228	0	228	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTAGCCTTTTGTTCAT	NA	False	NA	NA	False	GATAAA	-34	NA	25145450	25146532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25145400_25146500
Isoform_46252_3	chr9	-	183	1	Intergenic	novelGene_2038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58170725	58170542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_58170500_58170700
Isoform_46253_15	chr10	-	178	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59830077	59829899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_59829900_59830100
Isoform_46256_14	chr2	-	2526	1	Genic_Genomic	ENSMUSG00000078903.11	novel	NA	NA	NA	NA	-7	-6725	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	175048717	175046191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_-_175046200_175048700
Isoform_46258_3	chr2	-	160	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	176764842	176764682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_176764700_176764800
Isoform_46260_5	chr2	-	177	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGTGCACAGAAA	NA	False	NA	NA	False	NA	NA	NA	176949006	176948829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_176948800_176949000
Isoform_46261_3	chr2	-	1797	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATCAAATCATAAACT	NA	False	NA	NA	False	NA	NA	NA	177021619	177019822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_177019800_177021600
Isoform_46262_6	chr2	-	176	1	Antisense	novelGene_ENSMUSG00000085830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCTGAAAAATA	7695	False	NA	NA	False	NA	NA	NA	25189096	25188920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_25188900_25189100
Isoform_46263_4	chr2	-	464	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAGAAGAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	177251317	177250853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_177250900_177251300
Isoform_46264_10	chr2	-	245	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGGAATCCAGAACTC	NA	False	NA	NA	False	NA	NA	NA	177253691	177253446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_177253400_177253700
Isoform_46266_4	chr2	+	1663	1	FSM	ENSMUSG00000061897.6	ENSMUST00000118761.2	456	1	-187	-1020	-187	1020	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	178819030	178820693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_178819000_178820700
Isoform_4627_3	chr11	-	1854	10	NNC	ENSMUSG00000020432.13	novel	1943	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	46.5015597773709	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882043	3867191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3882012
Isoform_46270_11	chr2	+	2364	1	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	16	-7636	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179712400	179714764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_179712400_179714800
Isoform_46272_11	chr2	-	184	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAATGCTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	179718954	179718770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_179718800_179719000
Isoform_46273_4	chr2	+	201	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179885355	179885556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_179885400_179885600
Isoform_46276_4	chr2	-	3427	1	ISM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	40960	0	14565	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180303183	180299756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_-_180299800_180303200
Isoform_46277_3	chr2	+	1721	1	NIC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	51	-2851	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	180351960	180353681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180352000_180353700
Isoform_46278_3	chr2	-	192	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGGCCATCCTT	NA	False	NA	NA	False	NA	NA	NA	180355474	180355282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_180355300_180355500
Isoform_46279_9	chr2	+	2232	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGTCTGAAAGCTCTT	NA	False	NA	21	True	AGTAAA	-22	NA	180361159	180363391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_180361200_180363400
Isoform_4628_5	chr11	-	1948	10	FSM	ENSMUSG00000020432.13	ENSMUST00000020710.11	1897	10	-52	1	-3	-1	multi-exon	FALSE	canonical	3	8	junction_9	45.2714719535328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGACGTAGAGTCCTGG	NA	False	NA	-12	True	ATTAAA	-16	NA	3882047	3867192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3881975
Isoform_46280_4	chr2	-	166	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAAAAAAAAATCTAGC	1025	False	NA	NA	False	NA	NA	NA	180385770	180385604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_180385600_180385800
Isoform_46282_7	chr5	+	194	1	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	115802508	115802702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115802500_115802700
Isoform_46283_5	chr2	+	280	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATCCAAA	2111	False	NA	NA	False	NA	NA	NA	25257786	25258066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_25257800_25258100
Isoform_46284_6	chr2	+	1296	1	NIC	ENSMUSG00000027575.20	novel	2382	12	NA	NA	1	-4388	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGATT	4046	False	NA	NA	False	AAGAAA	-10	NA	180609038	180610334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_180609000_180610300
Isoform_46285_6	chr2	+	177	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTAGCTCTCGA	6382	False	NA	NA	False	NA	NA	NA	180832085	180832262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_180832100_180832300
Isoform_46286_4	chr2	-	185	1	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	180833871	180833686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_180833700_180833900
Isoform_46287_3	chr2	+	2597	1	Antisense	novelGene_ENSMUSG00000038705.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTACA	560	False	NA	NA	False	NA	NA	NA	180929583	180932180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_180929600_180932200
Isoform_4629_13	chr11	-	1909	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	34	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
Isoform_46290_3	chr2	-	188	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAGCAAAAATCCAA	2643	False	NA	NA	False	NA	NA	NA	180952049	180951861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_180951900_180952000
Isoform_46291_7	chr2	+	1152	1	NIC	ENSMUSG00000000827.19	novel	587	6	NA	NA	-3	-4207	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCTTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	181138988	181140140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_181139000_181140100
Isoform_46292_59	chr2	-	178	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCTGATGGCC	NA	False	NA	-11	True	NA	NA	NA	181177257	181177079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_181177100_181177300
Isoform_46293_11	chr2	-	199	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTCCTCTATTGAGG	NA	False	NA	NA	False	TATAAA	-9	NA	181267525	181267326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_181267300_181267500
Isoform_46294_3	chr12	+	167	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99400923	99401090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_99400900_99401100
Isoform_46295_7	chr2	+	203	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATTTTGGGGGGGG	1483	False	NA	NA	False	NA	NA	NA	181308237	181308440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_181308200_181308400
Isoform_46296_5	chr2	-	201	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	181599769	181599568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_181599600_181599800
Isoform_46297_7	chr15	-	168	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAACACACTCA	8820	False	NA	NA	False	NA	NA	NA	75900760	75900592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_75900600_75900800
Isoform_4630_3	chr11	-	1988	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	-40	-3	-25	3	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTAGAGTCCTGGTGCC	NA	False	NA	-8	True	ATTAAA	-20	NA	3881829	3867188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881724
Isoform_46300_38	chr2	+	870	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	71	42	71	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGGATATGAAATATAAA	NA	False	NA	-15	True	AATAAA	-25	NA	25596821	25597691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25596800_25597700
Isoform_46302_144	chr2	+	865	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	114	4	114	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGATTCTTTTTTAT	NA	False	NA	23	True	TATAAA	-19	NA	25596864	25597729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_25596900_25597700
Isoform_46304_3	chr2	-	173	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAACTTACA	NA	False	NA	NA	False	NA	NA	NA	25921050	25920877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_25920900_25921000
Isoform_46305_3	chr5	+	176	1	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATTTTTCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142518999	142519175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_142519000_142519200
Isoform_46306_6	chr2	-	3497	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1508	-1569	211	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030322	26026825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26026800_26030300
Isoform_46308_4	chr2	-	3734	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1747	-1567	-28	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGAGTGATTGCTTA	NA	False	NA	-8	True	ATTAAA	-17	NA	26030561	26026827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_26026800_26030600
Isoform_4631_72	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
Isoform_46310_6	chr2	-	183	1	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGATTAATGTGGCC	NA	False	NA	-2	True	NA	NA	NA	26035047	26034864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_26034900_26035000
Isoform_46311_3	chr2	+	178	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTCTC	NA	False	NA	NA	False	NA	NA	NA	26414004	26414182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_26414000_26414200
Isoform_46312_74	chr2	-	617	1	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26530256	26529639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_26529600_26530300
Isoform_46314_5	chr2	+	178	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGTGAACGCT	NA	False	NA	NA	False	NA	NA	NA	4973145	4973323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_4973100_4973300
Isoform_46317_9	chr2	+	1692	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	201	5	22	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTCCCTTTCTCATTT	NA	False	NA	-2	True	AATAAA	-10	NA	27332536	27334228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_27332500_27334200
Isoform_46318_3	chr2	-	169	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	27408016	27407847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_27407800_27408000
Isoform_4632_71	chr11	-	1912	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	115	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
Isoform_46327_5	chr2	-	834	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	347	-181	347	181	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	28824274	28823440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28823400_28824300
Isoform_46328_4	chr2	-	1020	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	161	-181	161	181	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	28824460	28823440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28823400_28824500
Isoform_46329_4	chr2	+	1459	1	NIC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	11	-19861	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGAAAACTACTAA	NA	False	NA	NA	False	NA	NA	NA	28950288	28951747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_28950300_28951700
Isoform_4633_52	chr11	-	1397	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	14	0	14	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	1	True	AATAAA	-17	NA	4045431	4041479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
Isoform_46330_9	chr5	-	176	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	129982009	129981833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_129981800_129982000
Isoform_46335_27	chr2	+	2644	1	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	0	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAGAAA	7226	False	NA	NA	False	NA	NA	NA	29779829	29782473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_29779800_29782500
Isoform_46336_3	chr2	+	3850	1	FSM	ENSMUSG00000057738.15	ENSMUST00000202286.2	1471	1	-2	-2377	0	2377	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29855688	29859538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_29855700_29859500
Isoform_46342_10	chr2	-	406	1	Antisense	novelGene_ENSMUSG00000054766.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29961417	29961011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_29961000_29961400
Isoform_4635_10	chr11	-	2578	12	FSM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	46	7	-32	-7	multi-exon	TRUE	canonical	3	7	junction_11	8.90816321700644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4068785	4047045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624
Isoform_46358_4	chr2	+	180	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTATCAGGGGC	NA	False	NA	NA	False	NA	NA	NA	30045949	30046129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_30045900_30046100
Isoform_4636_5	chr11	-	2669	12	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	9.93865481361196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4073417	4047045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4073165
Isoform_46360_18	chr2	-	1529	1	NIC	ENSMUSG00000039660.17	novel	2123	10	NA	NA	0	-551	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30068454	30066925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30066900_30068500
Isoform_46362_77	chr2	-	2106	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	-6	4	-6	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATACAAAAAAAAAAAAAA	2242	False	NA	20	True	AATAAA	-40	NA	30176352	30174246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_30174200_30176400
Isoform_46364_13	chr2	-	177	1	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGAATCTT	NA	False	NA	NA	False	NA	NA	NA	30251780	30251603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_30251600_30251800
Isoform_46365_5	chr2	+	177	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30279876	30280053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_30279900_30280100
Isoform_46366_3	chr2	-	4660	1	NIC	ENSMUSG00000026853.16	novel	4224	15	NA	NA	-5	2175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAGTAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	30305541	30300881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30300900_30305500
Isoform_46367_3	chr2	+	305	1	Antisense	novelGene_ENSMUSG00000026853.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30305643	30305948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_30305600_30305900
Isoform_46368_6	chr2	+	196	1	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAACTTTCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	73668455	73668651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_73668500_73668700
Isoform_46369_4	chr2	-	2282	1	NIC	ENSMUSG00000044320.15	novel	1033	8	NA	NA	-27	-2200	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACTAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	30691746	30689464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30689500_30691700
Isoform_4637_10	chr11	-	2592	11	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	5.85149553533112	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGAGCAGAATTCAT	NA	False	NA	-7	True	AATAAA	-15	NA	4073416	4047045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4073165
Isoform_46370_30	chr2	+	1380	1	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	1	-6841	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30697969	30699349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_30698000_30699300
Isoform_46371_7	chr2	-	2189	1	NIC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	6	-637	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATAAATCTTTACAA	1730	False	NA	NA	False	NA	NA	NA	30718297	30716108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_30716100_30718300
Isoform_46372_10	chr2	+	235	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAGGAT	NA	False	NA	NA	False	NA	NA	NA	30861765	30862000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_30861800_30862000
Isoform_46374_4	chr2	+	2140	1	FSM	ENSMUSG00000026854.17	ENSMUST00000192882.2	1901	1	35	-274	6	274	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30872380	30874520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_30872400_30874500
Isoform_46376_3	chr2	+	384	1	Antisense	novelGene_ENSMUSG00000075415.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAAAACAAAACAAA	1947	False	NA	NA	False	NA	NA	NA	30921466	30921850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_+_30921500_30921800
Isoform_46377_3	chr2	+	176	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAGAAAA	705	False	NA	NA	False	NA	NA	NA	30953690	30953866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_30953700_30953900
Isoform_46378_3	chr2	-	2415	1	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	5	-43498	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGGAAAGAAGGAA	4773	False	NA	NA	False	AAAACA	-9	NA	31032015	31029600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_31029600_31032000
Isoform_46379_23	chr2	-	179	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCTCTT	764	False	NA	NA	False	NA	NA	NA	31036024	31035845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_31035800_31036000
Isoform_4638_5	chr11	-	1934	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109949.8	1343	11	-10	-581	-10	12	multi-exon	FALSE	canonical	3	44	junction_4	69.004347689113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTAACATGGGGTTT	NA	False	NA	-8	True	AATAAA	-23	NA	4391092	4295801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_46380_3	chr2	+	930	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGGCACGGTGCGCC	NA	False	NA	NA	False	TATAAA	-16	NA	31195059	31195989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_31195100_31196000
Isoform_46382_4	chr2	+	178	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31421596	31421774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_31421600_31421800
Isoform_46386_16	chr2	+	2253	1	ISM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	112734	4	4639	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	2754	False	NA	16	True	AATAAA	-17	NA	31691296	31693549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_31691300_31693500
Isoform_46388_4	chr2	+	2641	1	NIC	ENSMUSG00000051373.6	novel	1947	2	NA	NA	-7	-11928	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31985569	31988210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_31985600_31988200
Isoform_46389_5	chr10	+	207	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119089100	119089307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_119089100_119089300
Isoform_4639_3	chr11	-	1900	10	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-4	11	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	73.2602329261589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391086	4295802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_46390_9	chr2	+	1966	1	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	81487	3	12801	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	NA	False	NA	21	True	AATAAA	-37	NA	32122580	32124546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_32122600_32124500
Isoform_46392_7	chr2	+	712	1	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	-11456	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	1936	False	NA	NA	False	NA	NA	NA	5850063	5850775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_5850100_5850800
Isoform_46393_3	chr2	-	2736	1	NIC	ENSMUSG00000039195.5	novel	2618	2	NA	NA	19	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCCCCTTCTTCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	32271855	32269119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_32269100_32271900
Isoform_46398_7	chr2	-	188	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGGAGACACTGACAGC	NA	False	NA	NA	False	NA	NA	NA	32727572	32727384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_32727400_32727600
Isoform_46399_7	chr2	-	176	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACCATCCAGAGG	NA	False	NA	NA	False	NA	NA	NA	32743904	32743728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_32743700_32743900
Isoform_46401_4	chr2	+	1252	1	ISM	ENSMUSG00000025817.13	ENSMUST00000026927.10	4764	10	24546	1079	21430	-1079	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGGGTGGTGTCAAAT	NA	False	NA	4	True	AATAAA	-11	NA	5874375	5875627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr2_+_5874400_5875600
Isoform_46404_5	chr2	-	168	1	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	2400	False	NA	NA	False	NA	NA	NA	32873644	32873476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_32873500_32873600
Isoform_46406_12	chr2	+	194	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAGAACAAAGAAGTTGG	757	False	NA	41	True	NA	NA	NA	5952335	5952529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_5952300_5952500
Isoform_46407_8	chr2	+	243	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCTTCCTTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34634168	34634411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34634200_34634400
Isoform_46408_3	chr2	+	189	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	34634745	34634934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34634700_34634900
Isoform_46409_4	chr2	+	282	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAATAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	34682330	34682612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34682300_34682600
Isoform_4641_3	chr11	-	3058	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	19	-2494	-4	2314	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTTTGAATGGGTGA	NA	False	NA	NA	False	AGTAAA	-17	NA	4391086	4371753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_46410_17	chr2	-	217	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGTTTGTTTGAGTCA	694	False	NA	0	True	AAAACA	-14	NA	34691867	34691650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_34691600_34691900
Isoform_46411_3	chr2	+	186	1	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAATAAACTGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	34708865	34709051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_34708900_34709100
Isoform_46413_5	chr2	-	928	1	FSM	ENSMUSG00000035949.16	ENSMUST00000201806.2	4405	1	6	3471	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAATAAAACAAAA	9230	False	NA	NA	False	NA	NA	NA	34716213	34715285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_34715300_34716200
Isoform_46414_14	chr2	-	543	1	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	711	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	34760951	34760408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_34760400_34761000
Isoform_46416_5	chr2	-	252	1	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCAGATATTGGACGT	NA	False	NA	NA	False	NA	NA	NA	35377796	35377544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_35377500_35377800
Isoform_46423_4	chr2	+	204	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAGTAATATGCTGT	NA	False	NA	NA	False	NA	NA	NA	37355102	37355306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_37355100_37355300
Isoform_46424_3	chr2	-	188	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37662509	37662321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_37662300_37662500
Isoform_46428_6	chr2	+	198	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAGAATGAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	38740401	38740599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_38740400_38740600
Isoform_46431_5	chr2	+	1366	1	Genic_Genomic	ENSMUSG00000035295.11_ENSMUSG00000026755.15	novel	NA	NA	NA	NA	-34	511	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	38895325	38896691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_38895300_38896700
Isoform_46432_3	chr2	-	486	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGGTGAGACAT	NA	False	NA	NA	False	ATTAAA	-44	NA	38898003	38897517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_38897500_38898000
Isoform_46433_7	chr2	-	172	1	Antisense	novelGene_ENSMUSG00000026755.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38900283	38900111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr2_-_38900100_38900300
Isoform_46434_45	chr2	-	408	1	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40413048	40412640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_40412600_40413000
Isoform_46435_3	chr2	+	565	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1079	314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	40446842	40447442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_40447295_40447329
Isoform_46436_3	chr2	+	471	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1173	314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	40446936	40447442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_40447295_40447329
Isoform_46437_5	chr2	+	360	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1284	314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	40447047	40447442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr2_+_40447295_40447329
Isoform_46439_4	chr2	-	198	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGCATT	NA	False	NA	NA	False	NA	NA	NA	44718510	44718312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_44718300_44718500
Isoform_46440_11	chr2	+	219	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACTATATT	NA	False	NA	NA	False	AATAAA	-28	NA	45026133	45026352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_45026100_45026400
Isoform_46442_3	chr2	+	3031	2	NNC	ENSMUSG00000086202.2	novel	424	2	NA	NA	-14	1212	intron_retention	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATGGGAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	45586602	45589671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr2_+_45587278_45587315
Isoform_46444_4	chr2	-	193	1	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCATTAAATGAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	48729598	48729405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_48729400_48729600
Isoform_46445_4	chr2	+	1865	1	FSM	ENSMUSG00000081272.2	ENSMUST00000119733.2	1308	1	-106	-451	-106	451	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGAGTGGAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	49198060	49199925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_49198100_49199900
Isoform_46446_3	chr2	-	177	1	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	49907652	49907475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_49907500_49907700
Isoform_46448_4	chr2	+	212	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGGGGTCACCACAGC	NA	False	NA	NA	False	NA	NA	NA	9905055	9905267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_9905100_9905300
Isoform_4645_21	chr11	-	514	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-2	-2	-2	0	multi-exon	FALSE	canonical	3	506	junction_1	31	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	-6	True	AATAAA	-19	NA	4654336	4651972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4652221_4653903_4653990_4654156
Isoform_46450_7	chr2	+	968	1	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	37	-3169	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	51962880	51963848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_+_51962900_51963800
Isoform_46451_3	chr2	-	3969	1	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	7	-18539	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTAAAAAACGTC	4762	False	NA	NA	False	NA	NA	NA	52314906	52310937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr2_-_52310900_52314900
Isoform_46454_24	chr2	-	2492	1	FSM	ENSMUSG00000083287.5	ENSMUST00000121574.2	684	1	-51	-1757	-51	1757	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-16	NA	53586867	53584375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_53584400_53586900
Isoform_46456_3	chr3	-	1585	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	1	1	1	-1	multi-exon	FALSE	canonical	3	15	junction_1	22.2161102706022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641204	5625560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
Isoform_46457_14	chr3	-	1639	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	108	2	-3	-2	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTGTGCATTTATTT	NA	False	NA	-2	True	AATAAA	-18	NA	5641191	5625561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
Isoform_46458_4	chr3	-	1582	4	NIC	ENSMUSG00000040374.14	novel	2051	5	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	25.9786236911983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641197	5625560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641097
Isoform_46459_13	chr3	-	2207	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	214	2	-58	-2	multi-exon	FALSE	canonical	3	9	junction_1	1.11803398874989	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGTCTGTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	8732102	8728420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
Isoform_4646_174	chr11	-	428	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	6	0	-2	0	multi-exon	FALSE	canonical	3	8152	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	-6	True	AATAAA	-19	NA	4654336	4651972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4652221_4654156
Isoform_46460_780	chr3	-	678	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	104	1	104	-1	multi-exon	FALSE	canonical	3	890	junction_1	0.5	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	8988874	8867206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8867475_8965045_8965228_8988646
Isoform_46462_18	chr3	-	496	2	NIC	ENSMUSG00000040269.6	novel	783	3	NA	NA	104	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	8988874	8867206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_8867475_8988646
Isoform_46465_415	chr3	-	2067	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	246	4004	1	1	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	False	NA	-27	True	AATAAA	-16	NA	9069537	8994656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_46466_249	chr3	-	2243	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	232	3842	-13	163	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCTTTTTATTTTTCT	NA	False	NA	-4	True	AATATA	-16	NA	9069551	8994494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_46468_74	chr3	-	2323	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-10	4004	-10	1	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	False	NA	-27	True	AATAAA	-16	NA	9069793	8994656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_4647_6	chr11	-	2956	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-331	3	-331	-3	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCAGCCCTGGTTCTG	7233	False	NA	0	True	NA	NA	NA	4697109	4686894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
Isoform_46472_12	chr3	-	3057	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	225	3035	-20	-2	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTTCTTTTTTATGTA	NA	False	NA	NA	False	AATAAA	-15	NA	9069558	8993687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_46473_26	chr3	-	2488	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-13	3842	-13	163	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCTTTTTATTTTTCT	NA	False	NA	-4	True	AATATA	-16	NA	9069796	8994494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
Isoform_46487_5	chr3	-	468	4	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	162750	11675	-6299	1	3prime_fragment	FALSE	canonical	3	267	junction_2	40.9416929574514	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAACAAAAACAAAAA	NA	False	NA	NA	False	AATATA	-18	NA	9512395	9503754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334
Isoform_46488_5	chr3	-	676	4	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	162542	11675	-6507	1	3prime_fragment	FALSE	canonical	3	267	junction_2	40.9416929574514	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAACAAAAACAAAAA	NA	False	NA	NA	False	AATATA	-18	NA	9512603	9503754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334
Isoform_46491_165	chr3	-	2127	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	67	1991	0	7	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATTTTCTTTCATTGT	NA	False	NA	-5	True	ATTAAA	-24	NA	10396432	10379006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
Isoform_46498_89	chr3	-	1606	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	3	1	0	-1	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTGATCTATA	NA	False	NA	-2	True	AATAAA	-44	NA	10416374	10405013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
Isoform_46499_4	chr3	-	1762	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	7	-159	3	159	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTGTCAGCTCCA	NA	False	NA	NA	False	ATTAAA	-21	NA	10416370	10404853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
Isoform_465_309	SIRV6	+	1087	9	FSM	SIRV6A	SIRV605	1088	9	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	1130	11330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
Isoform_4650_61	chr11	-	4634	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-425	-1815	-45	-5	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCGTCGAGTTTTT	8971	False	NA	-13	True	AATAAA	-16	NA	4799410	4715849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46501_27	chr3	-	1809	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	120	junction_6	235.712813848219	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTGATCTATA	NA	False	NA	-2	True	AATAAA	-44	NA	10416370	10405013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
Isoform_46502_11	chr3	-	1896	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	120	junction_5	243.390404266251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATTGCATTTGATCTA	NA	False	NA	-4	True	AATAAA	-42	NA	10416376	10405015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
Isoform_46505_4	chr3	-	2293	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505152	10483205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_46506_49	chr3	-	1496	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	790	2	1	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	10505145	10483995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_46508_9	chr3	-	1376	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	17	1119	2	1	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	10505145	10483995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
Isoform_46509_6	chr3	-	544	4	FSM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	14	1	14	-1	multi-exon	FALSE	canonical	3	74	junction_3	2488.45909483493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTTTAAATCTT	NA	False	NA	-6	True	AATAAA	-17	NA	14676267	14671349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676076
Isoform_4651_50	chr11	-	4684	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-477	-1813	74	-7	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8919	False	NA	-15	True	AATAAA	-14	NA	4799462	4715851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46510_559	chr3	-	396	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	33	6	2	-1	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTTTAAATCTT	NA	False	NA	-6	True	AATAAA	-17	NA	14676312	14671349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
Isoform_46514_7	chr3	-	1168	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	5	1	-2	-1	multi-exon	FALSE	canonical	3	4849	junction_2	211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTTTAAATCTT	NA	False	NA	-6	True	AATAAA	-17	NA	14676316	14671349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_14672354_14674600_14674718_14676269
Isoform_46515_9	chr3	-	831	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	-9	-314	2	314	multi-exon	FALSE	canonical	3	4849	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14676312	14673929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_14674718_14676269
Isoform_46516_46	chr3	-	2935	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-11	749	-11	-749	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAGCAGTTATTGTAT	NA	False	NA	-13	True	AATAAA	-13	NA	19217240	19186314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
Isoform_46521_4	chr3	-	1300	8	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-11	-2514	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	122.300399652258	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGACTATGTATGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	19217240	19188079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19211947_19212078_19217073
Isoform_46523_15	chr3	-	3739	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	41	236	6	-14	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGATGTTCAAATCT	NA	False	NA	NA	False	AATAAA	-4	NA	20089438	20050344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_46524_4	chr3	-	3995	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	19	2	0	-2	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAGCATGTGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	20089460	20050110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
Isoform_46525_13	chr3	-	1712	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	-11	-3	-11	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	-2	True	AATAAA	-15	NA	20209271	20176247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
Isoform_46527_9	chr3	-	4063	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	158.116957415143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1861	False	NA	NA	False	AATAAA	-20	NA	27207976	27151370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203219_27204177_27204330_27207851
Isoform_46528_4	chr3	-	4039	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	180.075442330584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTATCTTTTATG	1860	False	NA	NA	False	AATAAA	-9	NA	27207977	27151381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203219_27204177_27204330_27207865
Isoform_46529_5	chr3	-	4125	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_24	156.17538218298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1881	False	NA	NA	False	AATAAA	-19	NA	27207956	27151371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
Isoform_46531_175	chr3	-	4069	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1858	False	NA	NA	False	AATAAA	-20	NA	27207979	27151370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
Isoform_46533_29	chr3	-	4089	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1836	False	NA	NA	False	AATAAA	-18	NA	27208001	27151372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
Isoform_46535_64	chr3	-	4053	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	31	2	-2	-1	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1858	False	NA	NA	False	AATAAA	-18	NA	27207979	27151372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
Isoform_46538_6	chr3	-	3971	24	FSM	ENSMUSG00000027699.20	ENSMUST00000108298.9	4024	24	42	11	-8	-7	multi-exon	FALSE	canonical	3	28	junction_21	160.816383688852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTATCTTTTATG	1852	False	NA	NA	False	AATAAA	-9	NA	27207985	27151381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
Isoform_46546_3	chr3	-	4442	7	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253664	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	34.8456915876586	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27510883	27470309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27510822
Isoform_46547_29	chr3	-	1830	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	60	1	60	-1	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCTTGAGTTTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	30701958	30678416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_46548_11	chr3	-	1856	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	34	1	34	-1	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCTTGAGTTTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	30701984	30678416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_46549_35	chr3	-	1780	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	110	1	110	-1	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCTTGAGTTTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	30701908	30678416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
Isoform_4655_4	chr11	-	4556	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	81	-5	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	87.5255899088312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTCGTCGAGTTTTT	8926	False	NA	-13	True	AATAAA	-16	NA	4799455	4715849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
Isoform_46553_21	chr3	-	2100	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-6	-508	-6	508	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAGAAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	30753985	30732698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
Isoform_46556_8	chr3	-	729	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	-21	-3	-1	3	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTTCAGTTTGTAT	NA	False	NA	-4	True	AGTAAA	-23	NA	30753980	30752267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30752864_30753847
Isoform_46557_5	chr3	-	980	3	ISM	ENSMUSG00000037652.16	ENSMUST00000099163.5	2808	9	-2	31990	-2	-2724	5prime_fragment	FALSE	canonical	3	8	junction_2	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	31023566	31015259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_31016033_31019921_31020085_31023522
Isoform_46558_19	chr3	-	2366	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-3	5434	-3	-5430	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTGATGGAGTGTTA	NA	False	NA	-27	True	AATAAA	-20	NA	32419830	32394374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
Isoform_46559_27	chr3	-	2272	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	60	3665	0	1	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTTTCCATTTTT	NA	False	NA	-1	True	TATAAA	-17	NA	32670674	32638145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
Isoform_4656_11	chr11	-	4550	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	73	-7	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	81.0748351147808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8918	False	NA	-15	True	AATAAA	-14	NA	4799463	4715851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46560_5	chr3	-	2744	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	57	3196	1	470	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGTGAGTTTTCATC	NA	False	NA	NA	False	NA	NA	NA	32670677	32637676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
Isoform_46563_139	chr3	-	865	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	399	2100	399	78	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTTCTTCTAGCT	NA	False	NA	-11	True	TATAAA	-21	NA	32790897	32781645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
Isoform_46564_5	chr3	-	2779	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	376	209	376	-209	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGAGTGGTGTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	32790920	32779754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
Isoform_46569_575	chr3	-	577	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	9	73	0	2	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTCTTGGTATATT	NA	False	NA	-2	True	NA	NA	NA	34135461	34131500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
Isoform_46574_3	chr3	-	2843	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	580	1557	-56	-156	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTGTGTGGCCTAA	NA	False	NA	-1	True	CATAAA	-21	NA	35987041	35947810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_46575_23	chr3	-	2785	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	637	1558	1	-157	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTTGTGTGTGGCCTA	NA	False	NA	-2	True	CATAAA	-20	NA	35986984	35947811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_46577_9	chr3	-	3469	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	636	875	0	526	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCTCCCATATTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	35986985	35947128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
Isoform_46585_148	chr3	-	2415	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	35	5	-2	1	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGACTGAGCTGTAGTT	NA	False	NA	NA	False	TATAAA	-23	NA	36054792	36013986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_46587_22	chr3	-	2956	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	22	-523	-15	2	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	36054805	36013458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
Isoform_46588_18	chr3	-	1502	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	227	2	-8	-2	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGTAGGTTTGTGT	NA	False	NA	1	True	AATAAA	-19	NA	36529816	36503073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
Isoform_46589_13	chr3	-	1553	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	176	2	-59	-2	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGTAGGTTTGTGT	NA	False	NA	1	True	AATAAA	-19	NA	36529867	36503073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
Isoform_4659_44	chr11	-	4599	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	118	3	-53	-3	multi-exon	TRUE	canonical	3	105	junction_1	67.5504749551524	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGTCGAGTTTTTTT	8963	False	NA	-11	True	AATAAA	-18	NA	4799418	4715847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46592_458	chr3	-	2779	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	184	2	-2	-2	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATTTGGTGGGCTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	36626115	36619015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
Isoform_46593_63	chr3	-	2813	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	152	0	-34	0	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGGTGGGCTGTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	36626147	36619013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
Isoform_466_132	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7772.9807349673	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_4660_17	chr11	-	4636	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	81	3	81	-3	multi-exon	FALSE	canonical	3	105	junction_1	67.5504749551524	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGTCGAGTTTTTTT	8926	False	NA	-11	True	AATAAA	-18	NA	4799455	4715847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46600_10	chr3	-	2598	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	86	3	-2	-3	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACTTGTGTCTTTATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	36667540	36627293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
Isoform_46601_5	chr3	-	1018	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	52	-6	26	6	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTGGTAGTTACTGC	NA	False	NA	NA	False	AATAAA	-27	NA	37366543	37362764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
Isoform_46602_3	chr3	-	903	4	FSM	ENSMUSG00000045031.19	ENSMUST00000075537.7	762	4	-8	-133	-8	-5	multi-exon	FALSE	canonical	1	1	junction_1	11.7851130197758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAAGTATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	37366577	37362775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_37363331_37364085_37364215_37364441_37364589_37366505
Isoform_46603_9	chr3	-	1096	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-4	63	-4	9	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCACTGGGTCACAA	NA	False	NA	-1	True	AATAAA	-28	NA	37473749	37459121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
Isoform_46604_3	chr3	-	5264	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTCAGCATTGGATA	NA	False	NA	-1	True	AATAAA	-28	NA	38538993	38506216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
Isoform_46605_5	chr3	-	2994	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	137	20	-54	-20	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTCATATTTCCAGTA	NA	False	NA	-4	True	AATAAA	-14	NA	40801183	40772557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
Isoform_46606_4	chr3	-	3103	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	32	16	32	-16	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATATTTCCAGTACATA	NA	False	NA	0	True	AATAAA	-18	NA	40801288	40772553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
Isoform_46608_26	chr3	-	2622	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	38	347	38	-347	multi-exon	FALSE	canonical	3	569	junction_2	17	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTCAAATGTCTCAT	NA	False	NA	-1	True	AATAAA	-24	NA	41037443	41021107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_46609_126	chr3	-	1794	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	38	1175	38	1019	multi-exon	FALSE	canonical	3	569	junction_2	17	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATAAGCTCGAGTCG	NA	False	NA	NA	False	AATAAA	-13	NA	41037443	41021935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_4661_4	chr11	-	4500	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	78	-7	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	100.950306020905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8923	False	NA	-15	True	AATAAA	-14	NA	4799458	4715851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46610_21	chr3	-	2968	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	38	1	38	-1	multi-exon	FALSE	canonical	3	569	junction_2	17	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTACATTTTTGGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	41037443	41020761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_41023160_41024714_41024871_41037029
Isoform_46613_4	chr3	-	852	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-9	1	multi-exon	FALSE	canonical	3	51	junction_3	13.2748718344933	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGCTCTCCTTCGTGTT	NA	False	NA	-9	True	AGTAAA	-17	NA	41447636	41432010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41447522
Isoform_46614_13	chr3	-	1100	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	-3	1064	-1	61	multi-exon	FALSE	canonical	3	87	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTTGTCAATTTTTA	NA	False	NA	58	True	NA	NA	NA	41447628	41443177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_41444172_41447522
Isoform_46615_10	chr3	-	618	3	FSM	ENSMUSG00000106223.2	ENSMUST00000199633.2	643	3	12	13	12	-13	multi-exon	FALSE	canonical	3	84	junction_1	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGTTGATGTCAATGGAC	NA	False	NA	-15	True	AATAAA	-14	NA	41482897	41476651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_41476891_41477364_41477680_41482833
Isoform_46617_4	chr3	-	471	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	22	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGTTGATGTCAATGGA	NA	False	NA	-16	True	AATAAA	-13	NA	41482880	41476652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_41476891_41477378_41477565_41482833
Isoform_46618_14	chr3	-	593	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	-1	1	-1	-1	multi-exon	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTTTAGATGTGTC	NA	False	NA	-1	True	AATAAA	-41	NA	48563538	48560167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_48560355_48563132
Isoform_46619_3	chr3	-	2228	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	25	6970	19	-2059	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTGAAAGTATTTTG	8856	False	NA	NA	False	TATAAA	-26	NA	50398035	50326356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
Isoform_4662_6	chr11	-	2334	17	FSM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-69	205	-69	-205	multi-exon	FALSE	canonical	3	7	junction_1	88.5606915835124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTTGTTCATTTGTT	8947	False	NA	NA	False	NA	NA	NA	4799434	4722538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4722639_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46623_60	chr3	-	2933	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	16	-435	16	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184919	51162650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
Isoform_46625_5	chr3	-	3080	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	-131	-435	-70	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51185066	51162650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
Isoform_46628_8	chr3	-	3392	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-41	2	-22	-2	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTGTGGTTTTGGTCT	NA	False	NA	-9	True	AATATA	-11	NA	51248106	51162653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_46632_23	chr3	-	2546	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	60	5	-1	-5	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTGTACCTAGCACA	NA	False	NA	NA	False	ATTAAA	-13	NA	51184936	51163090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
Isoform_46635_22	chr3	-	2950	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	96	-435	-35	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184900	51162650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
Isoform_46636_10	chr3	-	3427	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	-18	2510	-18	0	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248102	51162650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
Isoform_4664_7	chr11	-	2445	17	NIC	ENSMUSG00000009073.17	novel	1795	16	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	88.7967306549064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATATGCCCAGGCAATAC	8953	False	NA	NA	False	ATTAAA	-19	NA	4799428	4729817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4730035_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46640_7	chr3	-	1393	4	FSM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	14	2	-9	-2	multi-exon	FALSE	canonical	0	0	junction_3	91.1604202613295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCTAGTCTTTCTTG	NA	False	NA	-2	True	AATAAA	-15	NA	51303933	51295834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303648
Isoform_46641_131	chr3	-	1225	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	5	2	5	-2	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCTAGTCTTTCTTG	NA	False	NA	-2	True	AATAAA	-15	NA	51303964	51295834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
Isoform_46644_1026	chr3	-	420	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	48	781	24	-3	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTGATGGACTCTTA	NA	False	NA	-12	True	AATAAA	-38	NA	51316361	51312878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
Isoform_46645_81	chr3	-	442	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	26	781	2	-3	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTGATGGACTCTTA	NA	False	NA	-12	True	AATAAA	-38	NA	51316383	51312878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
Isoform_46646_39	chr3	-	2923	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	12	247	-7	0	multi-exon	TRUE	canonical	3	106	junction_7	14.5610676585896	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924646	52889542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
Isoform_46648_4	chr3	-	5008	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	35	4	0	1	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATTGGCTTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	53370718	53356007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
Isoform_46649_30	chr3	-	981	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	30	3879	30	567	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTCTTTTTGAGGATT	NA	False	NA	-5	True	AATAAA	-22	NA	53771221	53764675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_46650_14	chr3	-	1645	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	26	3219	26	1227	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATGTCTTCAGGAAC	NA	False	NA	NA	False	AATAAA	-16	NA	53771225	53764015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_46652_11	chr3	-	1982	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	35	2873	-29	1573	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCTTGTCAGTAATG	NA	False	NA	-3	True	ATTAAA	-25	NA	53771216	53763669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
Isoform_46657_1027	chr3	-	949	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	345	6	-2	-2	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTTCTAGTCCTTAC	NA	False	NA	-18	True	AATAAA	-21	NA	54642469	54636104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
Isoform_4666_3	chr11	-	2530	16	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-26	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	123.657699585051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGGGGACTTATGCC	8990	False	NA	NA	False	AATAAA	-16	NA	4799391	4731941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4758695_4758835_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46667_65	chr3	-	2130	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	32	0	32	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTGCTGTACTTATTT	NA	False	NA	0	True	ATTAAA	-21	NA	54715180	54710535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_54711997_54712780_54712889_54714619
Isoform_46668_323	chr3	-	1078	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	3	1081	3	25	multi-exon	FALSE	canonical	3	271	junction_1	17.5	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTCATATCACTGT	NA	False	NA	-3	True	AATAAA	-22	NA	54715209	54711616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_54711997_54712780_54712889_54714619
Isoform_4667_9	chr11	-	2427	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-53	9599	-53	4	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTATGCCCAAGGCGTC	8963	False	NA	NA	False	AATAAA	-25	NA	4799418	4731932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46671_39	chr3	-	1628	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-2	3071	-2	-2938	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCCTGCATTTCTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	57483251	57366140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
Isoform_46672_65	chr3	-	1601	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	25	3071	25	-2938	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCCTGCATTTCTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	57483224	57366140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
Isoform_46673_31	chr3	-	1859	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	24	2814	24	-2681	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCATTGTAT	NA	False	NA	NA	False	TTTAAA	-22	NA	57483225	57365883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
Isoform_46675_308	chr3	-	959	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	25	2008	18	2	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTCTAGACAGTTCAA	NA	False	NA	-9	True	AATAAA	-21	NA	57559111	57553777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
Isoform_46676_4	chr3	-	2132	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	27	833	20	-833	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAC	NA	False	NA	NA	False	GATAAA	-17	NA	57559109	57552602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
Isoform_46678_6	chr3	-	2032	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	301	9	-229	1	multi-exon	FALSE	canonical	3	22	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCCATTGGACTCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	57755199	57749324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57750736_57752594_57752788_57754771
Isoform_46679_6	chr3	-	1774	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	559	9	29	1	multi-exon	FALSE	canonical	3	22	junction_1	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCCATTGGACTCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	57754941	57749324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_57750736_57752594_57752788_57754771
Isoform_46680_169	chr3	-	2312	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	139	2160	139	-2160	multi-exon	FALSE	canonical	3	847	junction_1	36.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATGATTTTGCAGA	NA	False	NA	10	True	AATAAA	-28	NA	58433174	58429397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58431290_58432503_58432580_58432830
Isoform_46682_89	chr3	-	2429	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	22	2160	22	-2160	multi-exon	FALSE	canonical	3	847	junction_1	36.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATGATTTTGCAGA	NA	False	NA	10	True	AATAAA	-28	NA	58433291	58429397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58431290_58432503_58432580_58432830
Isoform_4669_14	chr11	-	2248	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-60	9785	-60	-182	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAACATGTAC	8956	False	NA	NA	False	ATTAAA	-16	NA	4799425	4732118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46691_205	chr3	-	2210	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	284	17	284	-17	multi-exon	FALSE	canonical	3	158	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGTCATGCTTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	58599537	58582375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58583865_58598816
Isoform_46692_12	chr3	-	1670	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	-31	872	-31	366	multi-exon	FALSE	canonical	3	158	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTATTCAGTACATCT	NA	False	NA	-25	True	AATAAA	-14	NA	58599852	58583230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58583865_58598816
Isoform_46693_54	chr3	-	2491	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	3	17	3	-17	multi-exon	FALSE	canonical	3	158	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGTCATGCTTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	58599818	58582375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_58583865_58598816
Isoform_46696_11	chr3	-	3551	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	0	2069	0	563	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTTCTTGGTTTGGTT	NA	False	NA	NA	False	AATAAA	-39	NA	62414425	62377502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
Isoform_46699_18	chr3	-	1547	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	87	6	6	-6	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATTCTTTCTGAGA	NA	False	NA	NA	False	AATAAA	-9	NA	63836806	63822110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
Isoform_467_134	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
Isoform_46701_54	chr3	-	2961	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	185	4	83	-4	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCAAAGCTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	63872004	63849754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
Isoform_46704_11	chr3	-	3042	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	105	3	3	-3	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAAAGCTGTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	63872084	63849753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
Isoform_46705_583	chr3	-	2924	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	25	8	25	-8	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTTGTTTTTCT	2741	False	NA	-9	True	ATTAAA	-12	NA	65300019	65287083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
Isoform_46709_4	chr3	-	2246	12	FSM	ENSMUSG00000027829.16	ENSMUST00000129002.8	2229	12	-19	2	0	-2	multi-exon	FALSE	canonical	3	27	junction_8	57.4382888393569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTCAAATATCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	65865602	65853573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_4671_4	chr11	-	4528	13	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-88	12496	83	-394	5prime_fragment	FALSE	canonical	3	334	junction_9	18.8126730335342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGATCTGCTTAGAG	8928	False	NA	NA	False	NA	NA	NA	4799453	4734829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46710_5	chr3	-	2254	12	FSM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	-234	-39	-17	-5	multi-exon	FALSE	canonical	3	56	junction_8	51.1618724254952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865687	65853576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
Isoform_46712_17	chr3	-	2176	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	-11	4	-11	-4	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTTCAAATATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	65865681	65853575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
Isoform_46719_34	chr3	-	1096	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	16	0	16	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	67371243	67365330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
Isoform_46720_65	chr3	-	2892	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	43	4	3	-4	multi-exon	FALSE	canonical	3	361	junction_2	117	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGTGACATAGTTTT	NA	False	NA	-10	True	AATAAA	-22	NA	68952045	68942624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_68945342_68951100_68951176_68951945
Isoform_46723_4	chr3	-	1309	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	0	1630	0	-81	multi-exon	FALSE	canonical	3	361	junction_2	117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGAAGTCTTTCTCT	NA	False	NA	NA	False	AATGAA	-15	NA	68952088	68944250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_68945342_68951100_68951176_68951945
Isoform_46725_48	chr3	-	3712	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	14	0	14	0	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTGTGGAT	NA	False	NA	-1	True	AATAAA	-33	NA	69034411	68979553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
Isoform_46728_16	chr3	-	2229	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	31	-232	31	232	multi-exon	FALSE	canonical	3	41	junction_2	5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGAAAGGCCACCAT	NA	False	NA	-8	True	AATAAA	-10	NA	69506262	69481258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_69483294_69486658_69486725_69506134
Isoform_4673_5	chr11	-	2624	11	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-101	17736	70	1131	5prime_fragment	FALSE	canonical	3	334	junction_7	18.1683791241817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGTTAAAAAAAA	8915	False	NA	NA	False	NA	NA	NA	4799466	4740069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46730_21	chr3	-	1868	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	58	1	13	-1	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTTGCTATAAGACAAT	NA	False	NA	-12	True	ATTAAA	-12	NA	75464105	75423797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_46731_151	chr3	-	1239	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	57	631	12	155	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTCTTTACTTGAAAA	NA	False	NA	-3	True	AATAAA	-17	NA	75464106	75424427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_46734_48	chr3	-	1375	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	67	485	22	301	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTCCTTAATCAC	NA	False	NA	-16	True	AATAAA	-15	NA	75464096	75424281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_46736_6	chr3	-	1911	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	14	2	-5	-2	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTTGCTATAAGACAA	NA	False	NA	-13	True	ATTAAA	-11	NA	75464149	75423798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
Isoform_4674_5	chr11	-	2569	11	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-37	17727	-37	1140	5prime_fragment	FALSE	canonical	3	334	junction_7	18.1683791241817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAAAAAAAACATGC	8979	False	NA	NA	False	NA	NA	NA	4799402	4740060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
Isoform_46740_9	chr3	-	927	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	98	1	98	-1	multi-exon	FALSE	canonical	3	42	junction_1	94	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75562940	75554753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75555246_75556106_75556298_75562696
Isoform_46741_5	chr3	-	1037	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	-12	1	-12	-1	multi-exon	FALSE	canonical	3	42	junction_1	94	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75563050	75554753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_75555246_75556106_75556298_75562696
Isoform_46742_3	chr3	-	921	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6411250864577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGTTCTCATGGTCAT	NA	False	NA	-9	True	NA	NA	NA	75563062	75554756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562993
Isoform_46743_4	chr3	-	957	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	92.8906166771793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75563058	75554747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562962
Isoform_46744_4	chr3	-	1906	2	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	230	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75563058	75554753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_75556298_75562696
Isoform_46745_8	chr3	-	862	2	ISM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	98	927	98	-533	5prime_fragment	FALSE	canonical	3	230	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCGGGGGCTATTAGAC	NA	False	NA	NA	False	NA	NA	NA	75562940	75555679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_75556298_75562696
Isoform_46747_5	chr3	-	1254	2	ISM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	98	535	98	-141	5prime_fragment	FALSE	canonical	3	230	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTGGTCTCCATTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	75562940	75555287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_75556298_75562696
Isoform_46748_11	chr3	-	1823	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	71	junction_2	79.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTCATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	75563100	75554753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_75556298_75562696_75562869_75562993
Isoform_46751_6	chr3	-	1801	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-5	3	intron_retention	FALSE	canonical	3	25	junction_2	102.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGGTCATGGTGTTT	NA	False	NA	-2	True	NA	NA	NA	75563043	75554749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_75556298_75562696_75562869_75562962
Isoform_46753_4	chr3	-	1890	12	ISM	ENSMUSG00000062232.15	ENSMUST00000195708.2	6964	30	-712	32391	-712	14144	5prime_fragment	FALSE	canonical	3	32	junction_1	4.38630475702357	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAGAAAAGAACATGCAAA	NA	False	NA	NA	False	NA	NA	NA	79194536	79002228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79077045_79077064_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
Isoform_46754_3	chr3	-	1997	12	ISM	ENSMUSG00000062232.15	ENSMUST00000195708.2	6964	30	-813	32385	-813	14150	5prime_fragment	FALSE	canonical	3	32	junction_1	4.38630475702357	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACATGCAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	79194637	79002222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79077045_79077064_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
Isoform_46755_3	chr3	-	6929	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	86	284	-28	-284	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	8178	False	NA	-16	True	AATAAA	-14	NA	79475017	79363564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
Isoform_46756_21	chr3	-	2364	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	-8	21	-8	-6	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACGAGAGCATTTATT	3576	False	NA	-21	True	AATAAA	-9	NA	79536178	79511115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
Isoform_46757_87	chr3	-	2224	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	132	21	8	-6	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACGAGAGCATTTATT	3716	False	NA	-21	True	AATAAA	-9	NA	79536038	79511115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
Isoform_46758_6	chr3	-	666	3	FSM	ENSMUSG00000027809.15	ENSMUST00000149511.2	3740	3	-14	3088	7	-3088	multi-exon	FALSE	canonical	3	110	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCTCAATTGTTAGGT	3715	False	NA	NA	False	AGTAAA	-21	NA	79536039	79529961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_79530275_79530847_79530986_79535824
Isoform_46759_4	chr3	-	2786	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-41	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTCTTTTCTTCTTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	79750260	79719873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
Isoform_46763_3	chr3	-	2828	12	NNC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.52395458836696	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATTTCTTTTCTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	79750232	79719877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_79721454_79724323_79724378_79728564_79728737_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
Isoform_46764_3	chr3	-	2996	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	26	7	-20	-7	multi-exon	TRUE	canonical	3	21	junction_1	6.91214711777591	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATTTGCTCTTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	80820941	80750912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
Isoform_46765_13	chr3	-	2977	2	ISM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	420	0	420	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748654	83743578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_83746097_83748195
Isoform_46766_32	chr3	-	2887	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	127	0	127	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748947	83743578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_83746097_83748195_83748444_83748826
Isoform_46767_13	chr3	-	4973	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	41	541	0	13	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGCTTTTTAAAATCT	NA	False	NA	-13	True	AATAAA	-27	NA	83947441	83805502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_46768_6	chr3	-	4801	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	14.3287519105165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTATTTTT	NA	False	NA	-27	True	AATAAA	-13	NA	83947466	83805516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
Isoform_4677_3	chr11	-	3919	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	66	9	66	-9	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAAACTGTGGTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	4897998	4888762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
Isoform_46770_57	chr3	-	831	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	44	0	44	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063049	83995239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_46771_35	chr3	-	866	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	9	0	9	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063084	83995239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_46772_6	chr3	-	789	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTCCTTCTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	84063084	83995241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_46773_5	chr3	-	713	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	44	-3	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	82.0137183646736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTCCTTCTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	84063049	83995242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_83995482_84000861_84000907_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
Isoform_46774_10	chr3	-	2975	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21533	384	243	1	3prime_fragment	TRUE	canonical	3	56	junction_3	11.8801889247978	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AAGAAA	-44	NA	84098612	84071027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
Isoform_46777_3	chr3	-	3832	12	NNC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	24	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	30.83708189558	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAGAAAGAAAGAAAGA	8145	False	NA	NA	False	AAGAAA	-36	NA	84212729	84071035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099388_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84212547
Isoform_46778_3	chr3	-	4077	12	FSM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	2	1839	2	-2	multi-exon	FALSE	canonical	2	2	junction_2	2.63165724111457	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAGAGTGAAATGCCT	NA	False	NA	NA	False	AATAAA	-18	NA	84387734	84351343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84387674
Isoform_46779_19	chr3	-	2932	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-134	1	-43	-1	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGCCCTGTCCTTA	NA	False	NA	-4	True	ATTAAA	-15	NA	84489975	84403400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
Isoform_4678_3	chr11	-	3063	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	924	7	924	-7	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAACTGTGGTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	4897140	4888760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
Isoform_46784_3	chr3	-	2599	2	FSM	ENSMUSG00000085527.2	ENSMUST00000128872.2	375	2	-89	-2135	2	1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85481250	85463351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_85465826_85481125
Isoform_46790_10	chr14	-	758	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	81	-47	81	47	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCGTTAAAAAAAAAAAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	88361163	88360405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_88360400_88361200
Isoform_46792_3031	chr3	-	864	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	108	5	108	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	3031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049901	86045251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
Isoform_46793_1935	chr3	-	895	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	77	5	77	-5	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	1935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049932	86045251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
Isoform_46794_354	chr3	-	960	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	15	2	15	-2	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTGTCCATTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	86049994	86045248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
Isoform_4680_4	chr11	-	2742	7	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	73.0542036207819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTTGTTTTTATTA	NA	False	NA	-1	True	AAGAAA	-24	NA	5015302	5010372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015016_5015214
Isoform_46801_3	chr3	-	3544	17	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	83.1260103322059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCATGGGGTGGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	86827686	86693464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_86694720_86695928_86695942_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46802_68	chr3	-	3531	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-42	-3	2	-3	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86827684	86693462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46803_32	chr3	-	4054	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-565	-3	-48	-3	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86828207	86693462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46809_31	chr3	-	3532	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	475	5	2	1	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCATGGGGTGGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	86827684	86693464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_4681_31	chr11	-	2833	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	14	0	-13	0	multi-exon	FALSE	canonical	3	21	junction_5	62.4357447478784	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015313	5010371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
Isoform_46810_13	chr3	-	4031	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	-24	5	-24	1	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCATGGGGTGGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	86828183	86693464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46813_9	chr3	-	4087	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	-78	3	-78	-3	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGGGGTGGGTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	86828237	86693462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46814_4	chr3	-	3454	16	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	61.1551760324141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827684	86693465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46815_5	chr3	-	2603	12	FSM	ENSMUSG00000028078.15	ENSMUST00000194452.2	2066	12	-544	7	-66	-7	multi-exon	FALSE	canonical	3	155	junction_7	39.3729781062936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCATATAAACACACCTT	NA	False	NA	NA	False	AATAAA	-13	NA	86828225	86706234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46816_6	chr3	-	2059	12	FSM	ENSMUSG00000028078.15	ENSMUST00000194452.2	2066	12	0	7	0	-7	multi-exon	FALSE	canonical	3	155	junction_7	39.3729781062936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCATATAAACACACCTT	NA	False	NA	NA	False	AATAAA	-13	NA	86827681	86706234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
Isoform_46818_13	chr3	-	2588	3	FSM	ENSMUSG00000028076.13	ENSMUST00000107620.3	1475	3	-1122	9	-115	-9	multi-exon	FALSE	canonical	3	84	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906376	86903149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86903909_86903996_86904094_86904644
Isoform_46819_12	chr3	-	1861	5	ISM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	362	9	-125	-9	3prime_fragment	FALSE	canonical	3	57	junction_4	12.9687123493429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906386	86903149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939
Isoform_46821_16	chr3	-	1860	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	77	9	-23	-9	multi-exon	FALSE	canonical	3	57	junction_4	13.2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906671	86903149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
Isoform_46822_5	chr3	-	2562	4	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	12	-9	intron_retention	FALSE	canonical	3	57	junction_3	13.490737563232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906636	86903149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_86903909_86903996_86904094_86904644_86906213_86906498
Isoform_46823_10	chr3	-	2527	4	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	15	-9	intron_retention	FALSE	canonical	3	57	junction_3	13.490737563232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGTATCCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	86906601	86903149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_86903909_86903996_86904094_86904644_86906213_86906498
Isoform_46824_6	chr3	-	3528	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	22	3686	22	2349	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87081985	86989585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
Isoform_46826_12	chr3	-	3548	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	52	3678	5	2349	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87082002	86989585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
Isoform_46828_5	chr3	-	3038	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	30	4210	-17	1817	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTGCTCCTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	87082024	86990117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
Isoform_46829_3	chr3	-	3196	15	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	37618	2349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	16.1227751194086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTAGGGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	87044239	86989585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87044145
Isoform_4683_111	chr11	-	2574	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	-36	-8	-13	-1	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTTGTTTTTATTA	NA	False	NA	-1	True	AAGAAA	-24	NA	5015313	5010372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
Isoform_46830_459	chr3	-	2061	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	27	11	27	-11	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGCCTACAAGGTGTC	2326	False	NA	-10	True	AATAAA	-16	NA	87792888	87766220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
Isoform_46834_7	chr3	-	1750	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	-13	755	-13	-1	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9430	False	NA	-24	True	TATAAA	-25	NA	87837464	87830966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_46835_4	chr3	-	2139	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-43	1061	-26	1	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACCATGTAATTTTTA	9417	False	NA	-26	True	TATAAA	-23	NA	87837477	87830968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
Isoform_46836_11	chr3	-	2152	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-17	1062	0	0	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATACCATGTAATTTTT	9443	False	NA	-27	True	TATAAA	-22	NA	87837451	87830969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
Isoform_46839_1054	chr3	-	935	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-29	2	-29	-2	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTCTTCTGGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	87965831	87963828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
Isoform_46840_15	chr3	-	819	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	382.924519324631	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTCTTCTGGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	87965829	87963828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_87964084_87964292_87964441_87965227_87965339_87965436_87965546_87965633
Isoform_46845_4	chr3	-	1260	8	ISM	ENSMUSG00000104445.2	ENSMUST00000171887.4	1937	10	6870	251	6870	-251	3prime_fragment	TRUE	canonical	2	4	junction_4	1.39970842444753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTGCGCCTCTCC	6168	False	NA	NA	False	GATAAA	-23	NA	88155146	88150431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_88150756_88150899_88150974_88151831_88151954_88152439_88152574_88152742_88152881_88153121_88153289_88154738_88154887_88154993
Isoform_46846_29	chr3	-	459	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	126	-1	23	1	multi-exon	TRUE	canonical	3	152	junction_3	20.138409955991	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGGGTCTGAGTCTG	NA	False	NA	NA	False	CATAAA	-15	NA	88204180	88190062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
Isoform_46847_3	chr3	-	2361	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	44	1	-6	-1	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATAAGAGAGACTG	NA	False	NA	NA	False	NA	NA	NA	88241767	88235962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
Isoform_46848_15	chr3	-	2005	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	12	389	12	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241799	88236350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
Isoform_4685_73	chr11	-	3191	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015313	5010371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
Isoform_46851_16	chr3	-	2056	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	-5	0	-1	multi-exon	TRUE	canonical	3	20	junction_5	10.571660229122	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGGAGTCTGTCCAT	7128	False	NA	NA	False	AATAAA	-18	NA	88280050	88275923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
Isoform_46852_64	chr3	-	700	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	35.14612354158	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGCTGGAGTCTGT	7128	False	NA	NA	False	AATAAA	-14	NA	88280050	88275927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279845
Isoform_46853_13	chr3	-	685	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	6.26498204307083	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTGGGCTGGAGTCT	7128	False	NA	NA	False	AATAAA	-12	NA	88280050	88275929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279858
Isoform_46854_261	chr3	-	995	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	15	-3	-8	3	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317623	88301446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
Isoform_46855_43	chr3	-	1042	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-32	-3	-32	3	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317670	88301446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
Isoform_46856_7	chr3	-	787	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	10	-2	-8	2	multi-exon	FALSE	canonical	0	0	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGAGGAGGTTTCC	NA	False	NA	-4	True	AATAAA	-18	NA	88317623	88301447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88301878_88303211_88303408_88317462
Isoform_46858_33	chr3	-	3558	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	21	-2	-6	1	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4087	False	NA	-2	True	ATTAAA	-20	NA	88332425	88317803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
Isoform_46860_13	chr3	-	3514	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	-8	-2	-8	1	multi-exon	FALSE	canonical	3	7	junction_3	25.4689353265241	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4085	False	NA	-2	True	ATTAAA	-20	NA	88332427	88317803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
Isoform_46862_8	chr3	-	3426	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	4	-1	3	1	multi-exon	FALSE	canonical	0	0	junction_3	28.7672653471886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCTTTTGGGTTTT	4101	False	NA	-2	True	ATTAAA	-20	NA	88332411	88317803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
Isoform_46864_19	chr3	-	1970	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	135	3	135	-3	multi-exon	FALSE	canonical	3	30	junction_4	4.71036092035419	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTTATGGCGTGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	88348311	88343271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
Isoform_46866_6	chr3	-	2206	7	FSM	ENSMUSG00000028064.18	ENSMUST00000149145.2	2357	7	149	2	149	-2	multi-exon	TRUE	canonical	2	6	junction_6	14.3614066163451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTATGGCGTGCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	88357196	88343270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986
Isoform_46867_4	chr3	-	3220	15	FSM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	-21	6	-21	-3	multi-exon	FALSE	canonical	0	0	junction_13	15.169787374238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTTATGGCGTGCT	9675	False	NA	NA	False	ATTAAA	-17	NA	88363067	88343271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
Isoform_46869_82	chr3	-	3128	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	28	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	44.0904404848575	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	NA	False	NA	-3	True	AATACA	-19	NA	88410614	88388454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
Isoform_4687_5	chr11	-	2507	5	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	65.3241915372858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015342	5010371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825_5014479_5015214
Isoform_46875_492	chr3	-	2021	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	88410614	88390511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
Isoform_46877_9	chr3	-	2281	12	NIC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	55.0757554916427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGCCCTGGCCTTT	7821	False	NA	-3	True	ATTAAA	-17	NA	88417295	88390513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410694_88411475_88411551_88417187
Isoform_46878_27	chr3	-	632	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	-65	1	-31	0	multi-exon	FALSE	canonical	3	112	junction_3	1254.14043161929	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCACCTGCTT	1077	False	NA	-8	True	AATAAA	-12	NA	88460231	88457127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
Isoform_46881_574	chr3	-	573	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	95	0	-36	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1072	False	NA	-6	True	AATAAA	-14	NA	88460236	88457125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
Isoform_46884_8	chr3	-	417	2	FSM	ENSMUSG00000028062.16	ENSMUST00000145172.2	567	2	141	9	-40	-9	multi-exon	FALSE	canonical	3	2467	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAAGTGAGAGTACG	1068	False	NA	NA	False	AATAAA	-13	NA	88460240	88459545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88459825_88460102
Isoform_46885_6	chr3	-	2619	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	85	1863	85	908	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88679821	88653870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
Isoform_46886_4	chr3	-	2700	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	4	1863	4	908	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88679902	88653870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
Isoform_46887_11	chr3	-	1775	14	ISM	ENSMUSG00000068922.15	ENSMUST00000107494.8	2093	15	0	4536	0	1	5prime_fragment	FALSE	canonical	3	20	junction_12	192.717010546153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTGTAGGGACCTG	NA	False	NA	-35	True	AATAAA	-16	NA	88821238	88816949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820231_88820873_88821010_88821099
Isoform_46888_662	chr3	-	1739	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	108	28	-9	1	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTGTAGGGACCTG	NA	False	NA	-35	True	AATAAA	-16	NA	88821198	88816949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
Isoform_4689_10	chr11	-	2908	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-13	-4	intron_retention	FALSE	canonical	3	85	junction_4	39.0600499231632	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTGCATTTGTTTTTA	NA	False	NA	-4	True	AAGAAA	-21	NA	5015313	5010375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
Isoform_46890_19	chr3	-	2078	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	-150	2832	-150	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857871	88830941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46894_85	chr3	-	1720	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	208	2832	65	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857513	88830941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46895_147	chr3	-	1525	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	443	2792	-20	40	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTCTGTCAGTTTCT	NA	False	NA	-9	True	NA	NA	NA	88857278	88830901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46896_9	chr3	-	1470	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857511	88830941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
Isoform_46898_14	chr3	-	1305	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	248.823878102664	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857258	88830942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46899_5	chr3	-	1561	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	62	-3	intron_retention	FALSE	canonical	3	42	junction_4	248.823878102664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88857516	88830944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_469_205	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	1	-1	1	1	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCGGGAGTATACTTA	NA	False	NA	NA	False	NA	NA	NA	1001	11827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_46900_6	chr3	-	1377	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	248.823878102664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857329	88830941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46902_8	chr3	-	1246	11	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	267.054020752356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTATTGGATTTGCAAC	NA	False	NA	-6	True	ATTAAA	-18	NA	88857278	88830940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46903_6	chr3	-	1375	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
Isoform_46907_4	chr3	-	2074	8	ISM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	52	-1	-18	1	intron_retention	TRUE	canonical	3	31	junction_6	3.23879544250132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	88997300	88991286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975
Isoform_46908_4	chr3	-	1871	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	52	-1	-18	1	multi-exon	FALSE	canonical	2	2	junction_8	11.2354072022335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	88997300	88991286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
Isoform_46909_4	chr3	-	2197	9	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	2446	-1	-799	1	3prime_fragment	FALSE	canonical	2	6	junction_8	9.96791728496981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATGTGTCCCTGTGG	NA	False	NA	-4	True	AATAAA	-14	NA	88998151	88991286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802
Isoform_4691_8	chr11	-	3539	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	54	junction_4	51.0759238780857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTTTTTGCATTTGT	NA	False	NA	-9	True	AAGAAA	-16	NA	5015333	5010380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
Isoform_46912_38	chr3	-	2089	10	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	18	0	-18	0	intron_retention	FALSE	canonical	3	144	junction_9	697.876461528511	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009177	89000894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227
Isoform_46914_234	chr3	-	1384	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	-2	0	1	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009197	89000894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
Isoform_46917_1948	chr3	-	1162	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	75	0	4	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009191	89000894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
Isoform_46918_717	chr3	-	1205	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	32	0	32	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009234	89000894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
Isoform_46921_3	chr3	-	3281	8	FSM	ENSMUSG00000028051.11	ENSMUST00000029686.4	4002	8	19	702	19	-702	multi-exon	FALSE	canonical	0	0	junction_5	6.95759752107767	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACTTGTTCACTTATT	NA	False	NA	NA	False	NA	NA	NA	89067484	89054082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89055607_89056023_89056189_89057122_89057364_89057661_89057809_89058168_89058388_89058731_89058894_89059937_89060368_89067091
Isoform_46922_5	chr3	-	1544	3	NNC	ENSMUSG00000028051.11	novel	4002	8	NA	NA	13	-395	intron_retention	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGCTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	89067490	89059182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_89059313_89059352_89060368_89067091
Isoform_46924_534	chr3	-	1087	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	435	0	7	0	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAATCCCTTCTTTCT	NA	False	NA	-16	True	AATAAA	-21	NA	89121207	89116387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
Isoform_46926_13	chr3	-	1527	7	NIC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	7	-1	intron_retention	FALSE	canonical	3	739	junction_1	41.4286535302963	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGATCAAAGAATCCCT	NA	False	NA	-23	True	AATAAA	-14	NA	89121207	89116394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89116729_89116811_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
Isoform_46927_6	chr3	-	1346	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	-14	0	-13	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177846	89175554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
Isoform_46928_47	chr3	-	977	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	45	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177832	89175552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
Isoform_46929_9	chr3	-	1093	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	-9	2	-6	0	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177839	89175554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
Isoform_46930_4	chr3	-	1194	5	FSM	ENSMUSG00000027953.14	ENSMUST00000133575.8	1176	5	-19	1	-19	-1	multi-exon	FALSE	canonical	3	6	junction_3	61.3697808371514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGAGTGATGTGTTC	NA	False	NA	-32	True	AATAAA	-16	NA	89177852	89175553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177447_89177692
Isoform_46931_14	chr3	-	1494	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	-16	2	-16	1	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCCCACCA	1650	False	NA	NA	False	AATAAA	-19	NA	89186968	89179041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
Isoform_46932_26	chr3	-	2318	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	41	4	-37	-4	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAAATGTCTCTTAA	9230	False	NA	NA	False	NA	NA	NA	89230231	89221209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
Isoform_46936_47	chr3	-	1243	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	7	349	7	-349	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCTCACACCTGTA	1619	False	NA	-11	True	AATAAA	-19	NA	89245328	89241045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_46937_12	chr3	-	1568	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	26	5	26	-5	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCACCCTTCTTTGTG	1638	False	NA	NA	False	AATAAA	-9	NA	89245309	89240701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
Isoform_46940_3	chr3	-	2900	23	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-3	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	39.1648349609782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257292	89246953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89247261_89247361_89247430_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46941_4	chr3	-	3093	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	41.8793387843365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257291	89246953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46942_43	chr3	-	2965	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	8	2	1	-1	multi-exon	FALSE	canonical	3	47	junction_3	32.1478056009843	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCCTGGAAGCTGG	NA	False	NA	-13	True	AATAAA	-18	NA	89257295	89246948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46943_4	chr3	-	3021	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	39.5830542254913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257292	89246951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46944_21	chr3	-	2884	22	FSM	ENSMUSG00000028041.18	ENSMUST00000107448.9	2893	22	4	5	-3	-1	multi-exon	FALSE	canonical	3	22	junction_3	33.3036602620203	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257292	89246951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46945_22	chr3	-	2824	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	-13	-12	1	4	multi-exon	TRUE	canonical	3	16	junction_2	31.553882486946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAAGCTGGGTAGTT	NA	False	NA	-7	True	AATAAA	-24	NA	89257295	89246942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46947_10	chr3	-	1060	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-25	-1	-3	1	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGGTTTTGATTTGCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	89257292	89253833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
Isoform_46948_3	chr3	-	854	5	NIC	ENSMUSG00000028041.18	novel	1034	6	NA	NA	-2	-118	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	60.4333310351167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGCCTGGAACACTGT	NA	False	NA	NA	False	NA	NA	NA	89257284	89253952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89254374_89254458_89254536_89255175_89255253_89255824_89255935_89257115
Isoform_46949_5	chr3	-	3597	2	ISM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	5599	1	5599	-1	3prime_fragment	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCCACTTTTGGTT	NA	False	NA	-10	True	AAGAAA	-22	NA	89288897	89284951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_89287302_89287650
Isoform_46950_3	chr3	-	3664	3	FSM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	-16	2	-16	-2	multi-exon	FALSE	canonical	0	0	junction_2	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	-11	True	AAGAAA	-21	NA	89294512	89284952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89287302_89287650_89288823_89294369
Isoform_46951_6	chr3	-	3740	3	FSM	ENSMUSG00000028042.16	ENSMUST00000029677.9	3851	3	111	0	91	0	multi-exon	FALSE	canonical	3	27	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCCACTTTTGGTTC	NA	False	NA	-9	True	AAGAAA	-23	NA	89300558	89284950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89287302_89287650_89288823_89300341
Isoform_46952_12	chr3	-	3814	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89300976	89284953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
Isoform_46955_10	chr3	-	3681	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	13.5728487143349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89300982	89284955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300920
Isoform_46956_3	chr3	-	3681	4	NNC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6599986661331	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	-11	True	AAGAAA	-21	NA	89301032	89284952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300973
Isoform_46957_34	chr3	-	2000	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	2	-415	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	114.072300739129	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3746	False	NA	-15	True	AGTAAA	-18	NA	89319168	89310388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89318867
Isoform_46958_58	chr3	-	1801	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	22	415	16	-415	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3760	False	NA	-15	True	AGTAAA	-18	NA	89319154	89310388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
Isoform_46959_7	chr3	-	2917	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	13	-692	7	-6	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGGGGAATGAGGGCA	3751	False	NA	-6	True	AATAAA	-29	NA	89319163	89309281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
Isoform_46960_34	chr3	-	2897	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-7	2	0	-2	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGAATGAGGGCATGTG	3737	False	NA	-2	True	AATAAA	-33	NA	89319177	89309277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
Isoform_46961_269	chr3	-	1776	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	3	1113	3	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3747	False	NA	-15	True	AGTAAA	-18	NA	89319167	89310388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
Isoform_46962_42	chr3	-	1770	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	-18	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3719	False	NA	-15	True	AGTAAA	-18	NA	89319195	89310388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
Isoform_46967_522	chr3	-	743	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	105	1	-59	-1	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTGTGGTTATAAGACTG	NA	False	NA	-13	True	ATTAAA	-21	NA	89325585	89322779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89323271_89323580_89323709_89325461
Isoform_46974_11	chr3	-	2613	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	13	6013	13	-748	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAACAAAACCAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	89820490	89777378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
Isoform_46975_19	chr3	-	2589	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	37	6013	3	-748	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAACAAAACCAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	89820466	89777378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
Isoform_46976_30	chr3	-	2628	10	FSM	ENSMUSG00000027947.12	ENSMUST00000029559.7	3343	10	-33	748	1	-748	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAACAAAACCAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	89820502	89777378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786203_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
Isoform_46979_46	chr3	-	1062	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	28	2	-18	1	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7249	False	NA	NA	False	AATAAA	-17	NA	89905945	89902761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
Isoform_46980_30	chr3	-	1120	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	-30	2	1	1	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7191	False	NA	NA	False	AATAAA	-17	NA	89906003	89902761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
Isoform_46982_32	chr3	-	1078	6	ISM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	267	-169	240	0	3prime_fragment	FALSE	canonical	3	1573	junction_5	159.470373424031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7765	False	NA	NA	False	AATAAA	-16	NA	89905429	89902762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044
Isoform_46987_12	chr3	-	1021	7	FSM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	4	-170	4	1	multi-exon	FALSE	canonical	3	67	junction_6	657.328853940113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7502	False	NA	NA	False	AATAAA	-17	NA	89905692	89902761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905631
Isoform_46988_518	chr3	-	1071	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	59	9	-18	1	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7249	False	NA	NA	False	AATAAA	-17	NA	89905945	89902761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
Isoform_46989_384	chr3	-	1130	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	0	9	0	1	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7190	False	NA	NA	False	AATAAA	-17	NA	89906004	89902761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
Isoform_46992_13	chr3	-	1197	7	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	656.238629531125	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7221	False	NA	NA	False	AATAAA	-15	NA	89905973	89902763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
Isoform_46996_14	chr3	-	1291	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199014.5	1280	6	-11	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_4	119.761429517186	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7190	False	NA	NA	False	AATAAA	-15	NA	89906004	89902763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905311_89905834
Isoform_47001_5	chr3	-	3514	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	-7	2	0	-2	multi-exon	FALSE	canonical	3	137	junction_1	263.472271321105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3550	False	NA	-11	True	AATAAA	-19	NA	89959779	89907448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_47002_5	chr3	-	3402	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3545	False	NA	-12	True	AATAAA	-18	NA	89959784	89907449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_47003_4	chr3	-	3498	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	245.100808648197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3550	False	NA	-4	True	AATAAA	-19	NA	89959779	89913526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_47004_4	chr3	-	3443	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3542	False	NA	-2	True	AATAAA	-21	NA	89959787	89913524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_47005_5	chr3	-	3404	25	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	398	1	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	173.827575607746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	8121	False	NA	-2	True	AATAAA	-21	NA	89955208	89913524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
Isoform_47006_4	chr3	-	3488	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCGTTCTTTCCGTGC	3547	False	NA	-2	True	AATAAA	-21	NA	89959782	89913524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
Isoform_47007_5	chr3	-	3424	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3544	False	NA	-4	True	AATAAA	-19	NA	89959785	89913526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_47008_4	chr3	-	3403	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	275.661426794215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3538	False	NA	-4	True	AATAAA	-19	NA	89959791	89913526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
Isoform_47012_9	chr9	-	322	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	20	32	20	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7294	False	NA	NA	False	AATAAA	-16	NA	114811787	114811465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114811500_114811800
Isoform_47013_38	chr3	-	574	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	-25	-3	0	-1	multi-exon	TRUE	canonical	3	63	junction_3	8789.54951443285	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTCTTGTTTAACTG	NA	False	NA	-3	True	AATAAA	-18	NA	90120955	90119974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
Isoform_47014_2359	chr3	-	345	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	3	-3	0	-1	multi-exon	FALSE	canonical	3	13930	junction_3	2970.01597451746	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTCTTGTTTAACTG	NA	False	NA	-3	True	AATAAA	-18	NA	90120955	90119974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
Isoform_47016_3	chr3	-	1831	9	ISM	ENSMUSG00000027932.15	ENSMUST00000132041.2	2016	10	444	-9	-239	7	intron_retention	FALSE	canonical	3	73	junction_6	21.5895663458069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCGAGAGTCTGTGGG	NA	False	NA	-10	True	AATAAA	-21	NA	90296527	90292538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996
Isoform_47017_73	chr3	-	2281	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	-22	0	-11	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	90297256	90292545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
Isoform_47024_10	chr3	-	4336	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	-306	8	4	0	multi-exon	FALSE	canonical	3	31	junction_1	39.1651914615801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340916	90298702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_47028_121	chr3	-	4313	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	36	-12	36	4	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACATCTCTGTTCGTCC	NA	False	NA	1	True	AATGAA	-28	NA	90340800	90298690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_47030_73	chr3	-	4396	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-59	0	25	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340895	90298702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_47031_5	chr3	-	4508	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-160	-11	-67	3	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGACATCTCTGTTCGTC	NA	False	NA	0	True	AATGAA	-27	NA	90340996	90298691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_47032_3	chr3	-	4294	29	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_11	45.3995162025827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90340840	90298704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
Isoform_47033_25	chr3	-	726	2	FSM	ENSMUSG00000027931.13	ENSMUST00000152510.2	949	2	342	-119	342	0	multi-exon	FALSE	canonical	3	173	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90358746	90357897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90358490_90358612
Isoform_47034_18	chr3	-	964	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10769	0	2379	0	intron_retention	FALSE	canonical	3	97	junction_2	38	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_90358490_90358612_90358705_90362124
Isoform_47035_14	chr3	-	4093	22	FSM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	-30	3	-30	-3	multi-exon	TRUE	canonical	3	14	junction_16	35.8067374802507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACAGTCTCTTCTTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	90373203	90357900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
Isoform_47038_9	chr3	-	1995	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	7	-74	-2	66	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTACTTTAATCATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	90398333	90395266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
Isoform_47043_78	chr3	-	1992	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGCTTTCTGTTTATT	NA	False	NA	-2	True	NA	NA	NA	90416780	90406263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_47045_8	chr3	-	2048	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-4	48	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGGTGTGTTAATAT	NA	False	NA	-4	True	NA	NA	NA	90416787	90406214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
Isoform_47048_6	chr3	-	3277	5	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	677	junction_3	338.147157314682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTTCTGTTTATTTG	NA	False	NA	0	True	NA	NA	NA	90416780	90406261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90414934_90416497
Isoform_47049_152	chr3	-	1991	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	22	-1	0	1	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAACCCAGGCTTTCT	NA	False	NA	-9	True	NA	NA	NA	90416783	90406270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_47051_10	chr3	-	2041	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	30	-59	-6	50	multi-exon	TRUE	canonical	3	892	junction_3	230.9202459725	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90416775	90406212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_47053_11	chr3	-	1314	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	-31	729	-31	1	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTGAGTTTGTTTT	NA	False	NA	-27	True	NA	NA	NA	90416836	90407000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_47056_8	chr3	-	1849	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	1	-529	1	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	False	NA	-10	True	NA	NA	NA	90416780	90406271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
Isoform_47058_44	chr3	-	613	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	65	-1	-49	1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	-2	True	AATAAA	-21	NA	90421634	90418339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_90418672_90419302_90419457_90421507
Isoform_47061_14	chr3	-	2165	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-9	1375	-9	353	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAATACAG	NA	False	NA	NA	False	NA	NA	NA	94489865	94407994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_47069_10	chr3	-	2955	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	162	3144	-5	353	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAATACAG	NA	False	NA	NA	False	NA	NA	NA	94489861	94407994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
Isoform_47076_61	chr3	-	2596	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	35	0	-33	0	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6476	False	NA	-5	True	AATAAA	-16	NA	94566143	94520063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
Isoform_47078_118	chr3	-	2533	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	24	-2	23	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6464	False	NA	-5	True	AATAAA	-16	NA	94566155	94520063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
Isoform_47079_3	chr3	-	3080	11	NIC	ENSMUSG00000005968.15	novel	2555	12	NA	NA	20	2	intron_retention	FALSE	canonical	3	51	junction_8	17.5772580341759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCGTGGGTCTTTTACT	6461	False	NA	-3	True	AATAAA	-18	NA	94566158	94520061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
Isoform_47080_3	chr3	-	4966	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	-14	11	-10	-11	multi-exon	FALSE	canonical	3	13	junction_12	7.64509646767129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGAAATTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	94693788	94667386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
Isoform_47081_4	chr3	-	4975	21	NNC	ENSMUSG00000068876.17	novel	4963	21	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.98832576178678	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	94693793	94667380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_94668809_94669080_94669245_94669865_94669973_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
Isoform_47083_935	chr3	-	924	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	28	231	28	-2	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	935	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	94794244	94791634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
Isoform_47086_4	chr3	-	4589	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922539	94914141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
Isoform_47087_4	chr3	-	4818	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-1	-9	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922536	94913909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
Isoform_47088_10	chr3	-	4815	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	5	-10	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922743	94913910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_47089_11	chr3	-	4584	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922743	94914141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_47091_10	chr3	-	4868	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-37	-10	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922796	94913910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
Isoform_47092_8	chr3	-	4503	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	0	129	0	1	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922549	94914141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
Isoform_47093_5	chr3	-	4721	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	13	-102	-1	-10	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922536	94913910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
Isoform_47094_26	chr3	-	4502	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922757	94914141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_47095_23	chr3	-	4734	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922758	94913910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_47096_14	chr3	-	4555	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-51	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922810	94914141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_47097_7	chr3	-	4798	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-63	-10	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922822	94913910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
Isoform_47098_437	chr3	-	1286	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	-17	7	-17	0	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949880	94940014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
Isoform_47100_492	chr3	-	1277	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	45	10	-17	0	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949880	94940014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
Isoform_47111_14	chr3	-	3617	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	-38	39	17	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1215	False	NA	-27	True	AATAAA	-18	NA	95014224	94965879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
Isoform_47113_15	chr3	-	3594	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	43	26	-12	0	multi-exon	FALSE	canonical	3	28	junction_14	7.6080650011172	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1241	False	NA	-27	True	AATAAA	-18	NA	95014198	94965879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
Isoform_47115_9	chr3	-	757	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	-49	16	3	-16	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGGCA	1256	False	NA	NA	False	AATAAA	-17	NA	95014183	95004369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95004630_95013686
Isoform_47117_36	chr3	-	870	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	1	183	1	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1239	False	NA	-23	True	AATAAA	-28	NA	95041321	95037029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_47118_6	chr3	-	917	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	-46	183	-46	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1192	False	NA	-23	True	AATAAA	-28	NA	95041368	95037029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_47119_3	chr3	-	740	6	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	146.199042404525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1280	False	NA	-23	True	AATAAA	-28	NA	95041280	95037029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95037195_95037474_95037670_95040327_95040423_95040510_95040600_95040868_95040940_95041155
Isoform_47120_7	chr3	-	1132	2	FSM	ENSMUSG00000013707.4	ENSMUST00000013851.4	1122	2	-9	-1	-9	1	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCTCACGGTTTAATC	NA	False	NA	NA	False	AATAAA	-16	NA	95049680	95046830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95047908_95049625
Isoform_47121_10	chr3	-	1921	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	1	1	1	-1	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGGCTTAGTTTTTT	6381	False	NA	-1	True	AATAAA	-15	NA	95135987	95126446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95127775_95135394
Isoform_47122_10	chr3	-	1482	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	440	1	440	-1	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGGCTTAGTTTTTT	6820	False	NA	-1	True	AATAAA	-15	NA	95135548	95126446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95127775_95135394
Isoform_47123_22	chr3	-	1242	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	520	197	520	-10	multi-exon	FALSE	canonical	3	31	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAAAAAATACTTTGGTC	NA	False	NA	-11	True	AATATA	-11	NA	95148389	95144427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95144541_95147260
Isoform_47124_8	chr3	-	1423	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	534	2	534	-2	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCCTTTTTTCCAGT	NA	False	NA	NA	False	AATAAA	-14	NA	95148375	95144232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95144541_95147260
Isoform_47126_358	chr3	-	2780	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	360	0	360	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4710	False	NA	NA	False	ATTAAA	-19	NA	95189027	95160984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
Isoform_47127_83	chr3	-	2878	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	260	2	260	-2	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTTGTTTCTTTTTAA	4610	False	NA	NA	False	ATTAAA	-17	NA	95189127	95160986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
Isoform_4713_2533	chr11	-	2391	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	199	-2	0	2	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	2533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCCTCTGTTCTCGT	NA	False	NA	-11	True	AATAAA	-25	NA	5049067	5019686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
Isoform_47130_14	chr3	-	4581	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	-17	9	-17	-9	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGTACATTTTGGTCT	1671	False	NA	-13	True	ATTAAA	-6	NA	95264484	95230844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_47131_5	chr3	-	4632	22	FSM	ENSMUSG00000015697.15	ENSMUST00000015841.12	4658	22	26	0	-18	0	multi-exon	FALSE	canonical	3	19	junction_21	51.1160255943511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1670	False	NA	-4	True	ATTAAA	-15	NA	95264485	95230835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
Isoform_47132_58	chr3	-	4593	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	29	0	-17	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1671	False	NA	-4	True	ATTAAA	-15	NA	95264484	95230835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
Isoform_47136_3	chr3	-	1093	3	ISM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	10150	0	-558	0	3prime_fragment	FALSE	canonical	3	22	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95585019	95583513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_95584280_95584420_95584566_95584837
Isoform_47137_3	chr3	-	1898	11	FSM	ENSMUSG00000028108.17	ENSMUST00000117507.10	1901	11	3	0	1	0	multi-exon	FALSE	canonical	0	0	junction_8	2.86530975637888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTGTCTTTAGTGCG	6908	False	NA	NA	False	AATAAA	-19	NA	95646878	95641458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
Isoform_47144_631	chr3	-	2401	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	0	-1	0	1	multi-exon	TRUE	canonical	1	178	junction_5	104.738626737206	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_47145_12	chr3	-	2204	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	166	junction_16	126.775253278193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95662069
Isoform_47146_10	chr3	-	2283	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	21	junction_13	152.583161239208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_47147_58	chr3	-	2158	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	0	-1	0	1	multi-exon	FALSE	canonical	1	51	junction_13	151.691997884602	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
Isoform_47149_12	chr3	-	2510	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	1	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662191	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_47151_15	chr3	-	3023	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	1	intron_retention	FALSE	canonical	1	178	junction_5	103.251279249541	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
Isoform_47156_4	chr3	-	3336	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-41	3	-41	-3	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGAAAGTGTCATGAA	9969	False	NA	-7	True	ATTAAA	-12	NA	95726131	95679569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
Isoform_47157_3	chr3	-	3246	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-171	11913	-25	1	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGTGTCATGAATTGA	9985	False	NA	-3	True	ATTAAA	-16	NA	95726115	95679565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
Isoform_47159_6	chr3	-	2532	17	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	136.057834669673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATGATATTTTTC	NA	False	NA	-37	True	ATTAAA	-13	NA	95763197	95737932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
Isoform_47162_466	chr3	-	2436	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	0	497	0	1	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTATGATATTTTTC	NA	False	NA	-37	True	ATTAAA	-13	NA	95763197	95737932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
Isoform_47167_234	chr3	-	425	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	44	19	44	1	multi-exon	FALSE	canonical	3	716	junction_2	92.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAGGCTTGGACATAC	NA	False	NA	NA	False	AATAAA	-18	NA	95778787	95769964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_47168_3	chr3	-	708	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	14	-234	14	234	multi-exon	FALSE	canonical	3	716	junction_2	92.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	95778817	95769711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_47169_5	chr3	-	525	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	-53	16	-53	4	multi-exon	FALSE	canonical	3	716	junction_2	92.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCTTGGACATACAGA	NA	False	NA	NA	False	AATAAA	-21	NA	95778884	95769961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_47170_8	chr3	-	538	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	35	-85	35	85	multi-exon	FALSE	canonical	3	716	junction_2	92.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGCATTGACTGCTC	NA	False	NA	NA	False	AATAAA	-29	NA	95778796	95769860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95770245_95777805_95777928_95778764
Isoform_47171_5	chr3	-	483	3	NIC	ENSMUSG00000054312.7	novel	488	3	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAGGCTTGGACATAC	NA	False	NA	NA	False	AATAAA	-18	NA	95778818	95769964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95770245_95777805_95777955_95778764
Isoform_47172_10	chr3	-	1971	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	-33	1	-7	-1	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCTTTTTTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	95789550	95785815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
Isoform_47174_3	chr3	-	1091	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	37	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	72.7268863626101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAAATGCTTTTTTTTT	NA	False	NA	-6	True	ATTAAA	-10	NA	95789349	95785819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789266
Isoform_47175_7	chr3	-	1063	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	70.7615714918769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCTTTTTTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	95789517	95785815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789466
Isoform_47176_33	chr3	-	1409	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789354	95785816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
Isoform_47177_5	chr3	-	1514	7	NNC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	74.0954714465661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789558	95785813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266_95789365_95789466
Isoform_47178_92	chr3	-	1408	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	-7	-3	-7	1	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTTTTTTTTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	95789550	95785813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
Isoform_47180_8	chr3	-	963	5	FSM	ENSMUSG00000038550.11	ENSMUST00000161866.8	710	5	46	-299	0	0	multi-exon	FALSE	canonical	3	10	junction_4	75.7396857664461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789517	95785816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95789466
Isoform_47181_6	chr3	-	797	6	FSM	ENSMUSG00000038543.14	ENSMUST00000036360.13	752	6	-59	14	-9	-14	multi-exon	FALSE	canonical	2	9	junction_2	8.93532316147547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	95799326	95791283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799196
Isoform_47182_6	chr3	-	741	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	50	18	0	-14	multi-exon	FALSE	canonical	3	27	junction_2	2.22710574513201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	95799267	95791283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
Isoform_47183_56	chr3	-	2023	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	614	0	-22	0	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	False	NA	-5	True	AATAAA	-26	NA	95965164	95907143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
Isoform_47184_127	chr3	-	525	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-5	209	-5	66	multi-exon	FALSE	canonical	3	441	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTCCTTGATTTGTAC	NA	False	NA	-4	True	AATAAA	-18	NA	96104907	96104112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96104596_96104865
Isoform_47185_54	chr3	-	572	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-54	211	-54	64	multi-exon	FALSE	canonical	3	441	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATTCCTTGATTTGT	NA	False	NA	-6	True	AATAAA	-16	NA	96104956	96104114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96104596_96104865
Isoform_47186_6	chr3	-	736	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-5	-2	-5	2	multi-exon	FALSE	canonical	3	441	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGCTCTTAATACCT	NA	False	NA	NA	False	AATAAA	-23	NA	96104907	96103901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96104596_96104865
Isoform_47187_4	chr3	-	746	2	ISM	ENSMUSG00000074398.6	ENSMUST00000098839.3	659	3	78	2	78	-2	3prime_fragment	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTCTTGTTTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	96465053	96463082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_96463377_96464601
Isoform_47188_19	chr3	-	1402	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	22	3	0	-3	multi-exon	FALSE	canonical	3	65	junction_6	13.8534604827436	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501475	96485190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
Isoform_47189_4	chr3	-	1236	7	FSM	ENSMUSG00000028104.15	ENSMUST00000145001.2	607	7	0	-629	0	-1	multi-exon	TRUE	canonical	3	25	junction_6	26.9794160220137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTAACAGAGTGATG	NA	False	NA	-1	True	NA	NA	NA	96501475	96485188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
Isoform_47191_41	chr3	-	1095	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	15	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTTTTTTTAAGTG	NA	False	NA	-2	True	AATAAA	-13	NA	96615863	96613384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
Isoform_47192_3	chr3	-	1603	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	15	-508	0	506	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATAGAGTTCTCTGTCC	NA	False	NA	NA	False	AAAAAG	-13	NA	96615863	96612876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
Isoform_47193_10	chr3	-	1145	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	-8	-98	0	-1	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTTTTTTTTAAGT	NA	False	NA	-3	True	AATAAA	-12	NA	96615863	96613385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
Isoform_47194_5	chr3	-	2267	15	FSM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	-1	140	-1	-140	multi-exon	FALSE	canonical	3	35	junction_14	52.4860039652944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCGGCTGCAGATTCT	NA	False	NA	NA	False	NA	NA	NA	96634758	96618978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634428
Isoform_47195_5	chr3	-	2405	15	FSM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	-1	2	-1	-2	multi-exon	FALSE	canonical	3	35	junction_14	52.4860039652944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634758	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634428
Isoform_47197_188	chr3	-	2200	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	155	35	2	-2	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634789	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
Isoform_47199_10	chr3	-	2297	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	58	35	58	-2	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634886	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
Isoform_472_692	SIRV6	+	572	8	FSM	SIRV6A	SIRV602	574	8	2	0	2	0	multi-exon	FALSE	canonical	3	8561	junction_3	5767.41567350754	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1126	11279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
Isoform_47201_9	chr3	-	2034	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	58.8212617035912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634789	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96634664
Isoform_47203_35	chr3	-	2324	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634816	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
Isoform_47206_6	chr3	-	2136	13	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	17	junction_12	61.1411731614266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATATGTATCTGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96634794	96618840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96634664
Isoform_47208_5	chr3	-	830	4	FSM	ENSMUSG00000028099.9	ENSMUST00000141377.8	808	4	-24	2	-2	1	multi-exon	FALSE	canonical	3	193	junction_1	11.8415464455544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGGTGTGTGCCAGTC	NA	False	NA	-3	True	AATGAA	-20	NA	96634794	96630737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96631016_96631112_96631369_96633149_96633316_96634664
Isoform_47209_13	chr3	-	923	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	2	-2	2	-1	multi-exon	FALSE	canonical	3	207	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTGTGTGCCAGTCA	NA	False	NA	-2	True	AATGAA	-21	NA	96634789	96630736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96631369_96633149_96633316_96634664
Isoform_47211_80	chr3	-	1743	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	43	2812	9	393	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGGGGTCACTT	1906	False	NA	-28	True	AGTAAA	-15	NA	96812619	96778408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
Isoform_47212_6	chr3	-	4544	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	46	8	12	-8	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATACATCTGAGCAA	1909	False	NA	NA	False	AATAAA	-6	NA	96812616	96775604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
Isoform_47215_161	chr3	-	2943	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	11	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGATGGCCTATTGTTA	NA	False	NA	-27	True	NA	NA	NA	97517497	97468076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
Isoform_47216_3	chr3	-	2660	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	0	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.0481939910414	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGAGGAAAGTCGTGC	NA	False	NA	NA	False	NA	NA	NA	97517508	97469861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
Isoform_47219_6	chr3	-	2026	16	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	5	-1372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.5978274034128	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTCTAAAAGCATTGG	NA	False	NA	NA	False	AATAAA	-29	NA	97517514	97479722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
Isoform_47221_6	chr3	-	2787	11	ISM	ENSMUSG00000038170.16	ENSMUST00000168438.9	8264	46	186046	6	-5394	0	3prime_fragment	FALSE	canonical	1	1	junction_10	3.10644491340181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTATTTTCCTTTGC	212	False	NA	NA	False	ATTAAA	-15	NA	97609977	97597145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551
Isoform_47222_7	chr3	-	6131	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	55	-1	-23	1	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCAAGTTCTTATAGA	NA	False	NA	-8	True	AATAAA	-16	NA	97675270	97646168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
Isoform_47230_4656	chr3	-	1827	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	66	0	66	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	4656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247240	98220485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
Isoform_47231_959	chr3	-	1861	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	32	0	32	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247274	98220485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
Isoform_47234_26	chr3	-	3371	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTTGCTGGTTCCCT	NA	False	NA	-21	True	ATTAAA	-9	NA	100069723	100045501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
Isoform_47237_148	chr3	-	3422	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	4	6	4	-6	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTTGCTGGTTCCCT	NA	False	NA	-21	True	ATTAAA	-9	NA	100069719	100045501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
Isoform_47248_11	chr3	-	1674	2	ISM	ENSMUSG00000008763.17	ENSMUST00000123442.2	508	3	-681	-31	-486	31	intron_retention	FALSE	canonical	3	133	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAAAGAGGTAATAAGC	NA	False	NA	NA	False	AAGAAA	-8	NA	100593305	100563345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_100563591_100591876
Isoform_47252_72	chr3	-	4530	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	11	0	11	0	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876968	100846175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_47255_3	chr3	-	1958	10	ISM	ENSMUSG00000033222.17	ENSMUST00000127357.2	4544	17	13	9712	13	2698	5prime_fragment	FALSE	canonical	3	226	junction_1	16.7339383098548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTTTGTTCTTTCTT	NA	False	NA	NA	False	TATAAA	-18	NA	100876966	100863377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
Isoform_47259_11	chr3	-	6085	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-211	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.8538328410674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGACTTGTGTGAGGAA	4570	False	NA	-6	True	ATTAAA	-15	NA	101017805	100947550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_100949835_100949859_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_47260_16	chr3	-	3103	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-211	3010	-211	-3010	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACTCGGCGCTCTCT	4570	False	NA	0	True	ACTAAA	-21	NA	101017805	100950557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_47261_3	chr3	-	5951	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-54	5	-54	-5	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGACTTGTGTGAGG	4727	False	NA	-8	True	ATTAAA	-13	NA	101017648	100947552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
Isoform_47264_3	chr3	-	1158	5	FSM	ENSMUSG00000027863.9	ENSMUST00000029456.5	1153	5	-13	8	-13	1	multi-exon	FALSE	canonical	2	4	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGAGCATGCCCACTC	NA	False	NA	NA	False	AATAAA	-23	NA	101195268	101183222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_101183590_101187103_101187227_101190346_101190578_101194722_101195032_101195140
Isoform_47281_3230	chr3	-	3653	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	21	5	21	-5	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	3230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGAGTCCTTGT	NA	False	NA	-11	True	AATAAA	-19	NA	101511979	101483539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
Isoform_47287_4	chr3	-	2358	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	969	-1483	-21	20	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATGGAATATTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	102073277	102064012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
Isoform_47288_10	chr3	-	3324	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	71	3136	71	-2	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	102111938	102064034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_47289_13	chr3	-	666	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-15	-179	-15	2	multi-exon	FALSE	canonical	3	141	junction_2	87.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATGTACTTGTGTGTT	NA	False	NA	-9	True	NA	NA	NA	102073271	102070499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_102070850_102072670_102072804_102073088
Isoform_47290_6	chr3	-	855	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-26	-357	-26	180	multi-exon	FALSE	canonical	3	141	junction_2	87.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGTCTCTCTGGCCCAT	NA	False	NA	-8	True	NA	NA	NA	102073282	102070321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_102070850_102072670_102072804_102073088
Isoform_47291_4	chr3	-	864	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-720	176	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	116.808604135141	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGCCGTCTCTCTGGC	NA	False	NA	-12	True	NA	NA	NA	102075009	102070325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102074975
Isoform_47294_3	chr3	-	1669	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	69	9594	69	9	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGTGTGTTTCTGTGT	NA	False	NA	-2	True	NA	NA	NA	102111940	102070492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_47295_3	chr3	-	1840	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	70	9422	70	181	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTCTCTCTGGCCCATC	NA	False	NA	-7	True	NA	NA	NA	102111939	102070320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
Isoform_47296_3	chr3	-	651	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-713	9	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGTGTGTTTCTGTGT	NA	False	NA	-2	True	NA	NA	NA	102075002	102070492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
Isoform_47297_5	chr3	-	851	11	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	0	2471	combination_of_known_junctions	FALSE	canonical	3	35	junction_10	21.0667985227941	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAGTAAGAATACAT	NA	False	NA	NA	False	GATAAA	-18	NA	102843416	102827852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
Isoform_47299_10	chr3	-	862	11	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	2476	combination_of_known_junctions	TRUE	canonical	3	68	junction_10	14.7118999452824	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGTAAGAATACATATAAA	NA	False	NA	NA	False	GATAAA	-23	NA	102843416	102827847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
Isoform_4730_1541	chr11	-	2394	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	1342	junction_9	1044.5656674397	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCCTCTGTTCTCGT	NA	False	NA	-11	True	AATAAA	-25	NA	5049067	5019686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
Isoform_47305_4	chr3	-	2334	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	-139	2150	-139	130	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATTTAATTTGTTCCA	NA	False	NA	NA	False	TATAAA	-45	NA	103716899	103710070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_47306_9	chr3	-	4282	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	69	-6	3	6	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTTCCTTATTTTT	NA	False	NA	5	True	AATAAA	-21	NA	103716691	103707914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_47307_35	chr3	-	2134	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	66	2145	0	135	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTGTTCCACTTGG	NA	False	NA	NA	False	NA	NA	NA	103716694	103710065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_47309_10	chr3	-	2291	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	63	1991	-3	289	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAAGTCCCAGATAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103716697	103709911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
Isoform_47312_3	chr3	-	4026	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-74	3147	4	1	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTTGTGTGTTGGATA	NA	False	NA	-5	True	CATAAA	-16	NA	104419230	104364442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
Isoform_47328_1211	chr3	-	3536	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	26	-1	22	1	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725595	104702150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
Isoform_47329_64	chr3	-	3803	20	ISM	ENSMUSG00000002227.16	ENSMUST00000166979.8	3584	21	17	-1	17	1	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725862	104702150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
Isoform_47331_67	chr3	-	3570	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	-8	-1	-8	1	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725629	104702150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
Isoform_47335_69	chr3	-	3419	21	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	106	junction_20	272.054755518076	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725615	104702151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
Isoform_47339_120	chr3	-	3434	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	27	-1	23	1	multi-exon	TRUE	canonical	3	138	junction_20	265.434944948852	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCTTGCGTGTGTCT	NA	False	NA	-24	True	AAGAAA	-22	NA	104725594	104702150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
Isoform_47347_464	chr1	+	2925	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	0	66	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAC	NA	False	NA	NA	False	AATACA	-15	NA	105383695	105386620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr1_+_105383700_105386600
Isoform_47349_116	chr3	-	2858	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	115	220	10	-220	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCATGCCACACTGTCT	9288	False	NA	-77	True	AATAAA	-32	NA	104771706	104730314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_47351_13	chr3	-	3556	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	-520	157	-520	-157	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCTGTCCTTTCT	8653	False	NA	-14	True	AATACA	-15	NA	104772341	104730251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_47354_3	chr3	-	503	4	ISM	ENSMUSG00000070372.12	ENSMUST00000195912.2	360	6	2	6426	2	-676	5prime_fragment	FALSE	canonical	3	1298	junction_3	99.5199589138893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9280	False	NA	NA	False	NA	NA	NA	104771714	104747879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_104748208_104749976_104750029_104752233_104752298_104771655
Isoform_47355_23	chr3	-	3031	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-24	1827	-21	-1827	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTACATTCACTCTCC	1448	False	NA	NA	False	NA	NA	NA	104960291	104911059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
Isoform_47356_9	chr3	-	4857	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-24	1	-21	-1	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTCTGGGGGAAAAGT	1448	False	NA	-14	True	ATTAAA	-14	NA	104960291	104909233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
Isoform_47360_248	chr3	-	2774	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	125	6	3	-6	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATGTCAGTTTATTCT	NA	False	NA	-6	True	AATAAA	-17	NA	105594765	105585591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
Isoform_47364_15	chr3	-	2438	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-30	-1	-30	1	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCCCTTCTCTTTATC	NA	False	NA	-17	True	AATAAA	-13	NA	105708682	105634581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
Isoform_47365_93	chr3	-	1391	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	1	1015	1	32	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGTGTCTTTTTGT	NA	False	NA	-12	True	ATTAAA	-41	NA	105708651	105635597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
Isoform_47366_18	chr3	-	1261	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-39	1185	-39	-138	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTGGAAAAATGGGTC	NA	False	NA	-3	True	ATTAAA	-15	NA	105708691	105635767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
Isoform_47374_1421	chr3	-	1129	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	835	7	0	-3	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	1421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATTTATAAGTTTCA	NA	False	NA	-27	True	AATAAA	-9	NA	105866580	105850020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
Isoform_47375_250	chr3	-	1153	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	811	7	-12	-3	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATTTATAAGTTTCA	NA	False	NA	-27	True	AATAAA	-9	NA	105866604	105850020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
Isoform_47382_178	chr3	-	2032	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	62	720	3	3	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTCTCAATTTTATT	NA	False	NA	-2	True	AATAAA	-19	NA	106455056	106410295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
Isoform_47383_106	chr3	-	3192	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	628	523	56	-523	multi-exon	FALSE	canonical	3	61	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTTCTGCCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	107240361	107233259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107233621_107237530
Isoform_47384_7	chr3	-	3729	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	616	-2	44	2	multi-exon	FALSE	canonical	3	61	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGAGCTCCTCCGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	107240373	107232734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107233621_107237530
Isoform_47385_3	chr3	-	3320	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	498	525	-74	-525	multi-exon	FALSE	canonical	3	61	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGTTTTTCTGCCTGG	NA	False	NA	-10	True	AATAAA	-15	NA	107240491	107233261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107233621_107237530
Isoform_47386_176	chr3	-	3218	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	-3	0	-3	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539013	107519847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
Isoform_47387_6	chr3	-	3143	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	52.4607754802473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539013	107519847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107535471_107535542_107538816
Isoform_47389_10	chr3	-	3173	21	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	51.0788361261296	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539010	107519849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107520783_107521950_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
Isoform_47391_145	chr3	-	3826	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	37	0	-18	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-23	NA	107603839	107570435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
Isoform_47396_5	chr3	-	3946	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	-79	-4	-79	2	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGTGTGTCTTTTTTG	NA	False	NA	0	True	ATTAAA	-27	NA	107603955	107570431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
Isoform_47402_19	chr3	-	1135	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	16	2	1	-1	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGTCCTGTCGTA	1806	False	NA	-3	True	AGTAAA	-14	NA	107851049	107846164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
Isoform_47403_4	chr3	-	1176	9	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-345	-1	multi-exon	FALSE	canonical	3	14	junction_7	13.2452821789496	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGTCCTGTCGTA	7892	False	NA	-3	True	AGTAAA	-14	NA	107860782	107846164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107860362_107860439_107860681
Isoform_47405_34	chr3	-	1187	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	115	9	115	-9	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGAGTTGTGTCTTT	NA	False	NA	-9	True	AATAAA	-39	NA	107876484	107871020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
Isoform_47406_7	chr3	-	1108	7	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	115	-6	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	86.6033422501054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTTGTGTCTTTTTC	NA	False	NA	-6	True	AATAAA	-42	NA	107876484	107871017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420
Isoform_47407_9	chr3	-	1011	6	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	115	-2	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	88.3388929068052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTCTTTTTCTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	107876484	107871013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107875451_107875517_107876078_107876155_107876420
Isoform_47408_187	chr3	-	1071	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2035	False	NA	-4	True	AATAAA	-13	NA	107893776	107889017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
Isoform_47409_4	chr3	-	1379	7	NIC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	637	junction_1	38.7298334620742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCAGTGTATTAT	2075	False	NA	-7	True	AATAAA	-10	NA	107893736	107889020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107893426_107893673
Isoform_47410_6	chr3	-	1107	7	ISM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	491	4	324	2	3prime_fragment	FALSE	canonical	3	592	junction_3	57.9300344285146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATGAGTTGTGTCTTT	7074	False	NA	-8	True	AATAAA	-14	NA	107924798	107919574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666
Isoform_47411_131	chr3	-	1132	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	155	2	-12	-2	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTTGTGTCTTTTT	6738	False	NA	-6	True	AATAAA	-16	NA	107925134	107919572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_47412_64	chr3	-	1170	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	119	0	-48	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6702	False	NA	-4	True	AATAAA	-18	NA	107925170	107919570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_47413_5	chr3	-	1248	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	35	6	35	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCATGAGTTGTGTCT	6618	False	NA	-10	True	AATAAA	-12	NA	107925254	107919576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
Isoform_47414_4	chr3	-	1687	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	19	1	-9	-1	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGATGTCTTTTCCTA	NA	False	NA	-5	True	AATAAA	-19	NA	107952191	107947724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
Isoform_47415_4	chr3	-	1486	8	FSM	ENSMUSG00000027890.18	ENSMUST00000106670.2	777	8	16	-725	9	-2	multi-exon	FALSE	canonical	3	28	junction_7	31.2429583903252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCAGATGTCTTTTC	NA	False	NA	-8	True	AATAAA	-16	NA	107952166	107947727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952125
Isoform_47416_7	chr3	-	1469	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-6	-1	1	-1	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGATGTCTTTTCCTA	NA	False	NA	-5	True	AATAAA	-19	NA	107952181	107947724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
Isoform_47417_67	chr3	-	3660	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	-11	1	-11	-1	multi-exon	TRUE	canonical	3	198	junction_12	21.7907634157735	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCATGTGAAGGTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	107993954	107981378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
Isoform_47418_47	chr3	-	3610	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	-23	-1	-23	-1	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCATGTGAAGGTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	107993990	107981378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
Isoform_47420_4	chr3	-	3838	17	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	4	-1	intron_retention	FALSE	canonical	3	198	junction_11	22.3550889061082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107993963	107981380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
Isoform_47421_248	chr3	-	3228	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	34	0	34	0	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTATTTGTCTTG	NA	False	NA	-10	True	ATTAAA	-32	NA	108053428	108014595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
Isoform_47427_4	chr3	-	2663	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	352	29	-96	-11	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCTTTAAA	3286	False	NA	NA	False	NA	NA	NA	108117898	108109566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
Isoform_47428_54	chr3	-	2420	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-56	23	-32	-11	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCTTTAAA	3350	False	NA	NA	False	NA	NA	NA	108117834	108109566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
Isoform_47429_12	chr3	-	2511	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-119	-5	-95	-1	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTCTCCCTGTTCTGT	3287	False	NA	NA	False	AAGAAA	-27	NA	108117897	108109538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
Isoform_47431_3	chr3	-	2478	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-15	-76	9	70	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCCAAATGAGTGAGTG	3391	False	NA	NA	False	TATAAA	-32	NA	108117793	108109467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
Isoform_47435_82	chr3	-	1933	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	-25	-42	4	42	multi-exon	FALSE	canonical	3	101	junction_3	974.241336537401	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCTGGGTCTCCCT	NA	False	NA	3	True	NA	NA	NA	108352510	108333885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_47446_2360	chr3	-	1853	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	4	1713	4	34	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACCTTGTCTCTGCTGG	NA	False	NA	-5	True	NA	NA	NA	108352510	108333893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_47447_95	chr3	-	1945	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-78	1703	-67	44	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352592	108333883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_47448_30	chr3	-	1984	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	11	1575	11	172	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGTAACACAAGTTG	NA	False	NA	NA	False	AGTAAA	-38	NA	108352503	108333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
Isoform_47456_78	chr3	-	2845	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	19	0	19	0	multi-exon	FALSE	canonical	3	163	junction_1	15	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5293	False	NA	-14	True	AATAAA	-15	NA	108469763	108463740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108466277_108467502_108467635_108469586
Isoform_47458_91	chr3	-	3036	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	10	452	10	-452	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629615	108586405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
Isoform_4746_15	chr11	-	1943	15	FSM	ENSMUSG00000034164.18	ENSMUST00000062821.13	1947	15	4	0	4	0	multi-exon	TRUE	canonical	3	8	junction_2	4.11815294439988	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCTTGGTCTCTATGTG	7866	False	NA	NA	False	AATAAA	-19	NA	5102253	5056264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
Isoform_47464_9	chr3	-	3841	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	22	-365	22	365	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCATTCGTTACATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	108629603	108585588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
Isoform_47465_6	chr3	-	3544	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	18	368	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCGTTACATGTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	108629607	108585585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
Isoform_47466_29	chr3	-	2719	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	23	-452	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629602	108586405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
Isoform_47469_44	chr3	-	2448	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-32	3	-17	-3	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTGAGTTTTTCTT	NA	False	NA	0	True	AATAAA	-14	NA	108747859	108700494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
Isoform_4747_16	chr11	-	4902	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-86	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.262151374893	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGGTGAGGCCAGGCT	NA	False	NA	-6	True	AATAAA	-19	NA	5211644	5141553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_5144103_5144140_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_47472_3	chr3	-	3083	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	-36	3	-5	-1	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCCTGGGTGTTGGTTTC	6845	False	NA	-10	True	AATAAA	-17	NA	108819048	108810123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
Isoform_47473_44	chr3	-	3009	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	17	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6867	False	NA	-9	True	AATAAA	-18	NA	108819026	108810122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
Isoform_4748_201	chr11	-	3385	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-15	2	-15	-2	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTGTAATCCTGTAT	NA	False	NA	-4	True	AATAAA	-22	NA	5492202	5478888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_47483_38	chr3	-	3049	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	3	-1	3	1	multi-exon	FALSE	canonical	3	26	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAACCTGGTCTATT	NA	False	NA	-7	True	AATAAA	-19	NA	110158306	110153426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_110155172_110157002
Isoform_47485_46	chr3	-	1804	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	34	1	34	-1	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTCTAATTTTTCATT	NA	False	NA	-2	True	AATAAA	-15	NA	113423764	113399113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
Isoform_47486_3	chr3	-	3460	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	27	401	27	-4	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGTGTCTAATTTTTC	NA	False	NA	-5	True	AATAAA	-12	NA	113423771	113399116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
Isoform_47489_3	chr3	-	1570	2	FSM	ENSMUSG00000027981.15	ENSMUST00000127068.2	1532	2	-36	-2	34	2	multi-exon	FALSE	canonical	3	105	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113423764	113420724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_113422042_113423511
Isoform_47490_5	chr3	-	3026	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	15	5	15	-5	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCTTTTGTGAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	115508706	115504086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115506764_115508357
Isoform_47492_12	chr3	-	2877	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	164	5	164	-5	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCTTTTGTGAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	115508557	115504086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115506764_115508357
Isoform_47494_6	chr3	-	751	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	-11	-1	-1	1	multi-exon	FALSE	canonical	2	5	junction_2	22	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTTGGCTATGGTGA	933	False	NA	-4	True	NA	NA	NA	115681754	115675228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115675488_115679862_115680025_115681424
Isoform_47495_7	chr3	-	773	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTTGGCTATGGTGA	916	False	NA	-4	True	NA	NA	NA	115681771	115675228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_115675488_115679862_115680030_115681424
Isoform_47496_12	chr3	-	576	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185424.2	433	2	-140	-3	2	1	multi-exon	FALSE	canonical	3	36	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCTTGGCTATGGTGA	946	False	NA	-4	True	NA	NA	NA	115681741	115675228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115675488_115681424
Isoform_47497_23	chr3	-	2011	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	35	6974	35	-6974	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTACTTTGTAGCCTA	143	False	NA	60	True	TATAAA	-17	NA	115801020	115739595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
Isoform_475_616	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
Isoform_47502_4	chr3	-	1444	11	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	93.6707531730155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGAGCTGCTGCTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	116301731	116282613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298096_116300483_116300628_116301399_116301501_116301593
Isoform_47503_133	chr3	-	1469	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	123	2	-20	-2	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGAGCTGCTGCTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	116301734	116282613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_47504_5	chr3	-	1565	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	27	2	27	-2	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGAGCTGCTGCTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	116301830	116282613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_47505_4	chr3	-	1354	10	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	97.8116103083428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301725	116282614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_116282988_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
Isoform_47506_4	chr3	-	1963	12	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	44.0480579022353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGAGTGTGAGGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	116388479	116374740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116384206_116385841_116385909_116386112_116386160_116388287
Isoform_47507_20	chr3	-	1840	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19725	2	-2	0	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388511	116374743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
Isoform_47509_3	chr3	-	1134	6	ISM	ENSMUSG00000033439.13	ENSMUST00000156161.8	1991	9	21	4815	-6	629	5prime_fragment	FALSE	canonical	3	87	junction_2	15.6920361967464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAATCTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116388515	116382587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
Isoform_4751_23	chr11	-	3436	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-66	2	-66	-2	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTGTAATCCTGTAT	NA	False	NA	-4	True	AATAAA	-22	NA	5492253	5478888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_47510_435	chr3	-	2716	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	62	4	-5	-4	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTTGATCTGTGAG	NA	False	NA	-5	True	AATAAA	-32	NA	116456264	116424816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
Isoform_47513_83	chr3	-	2749	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	29	4	29	-4	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTTGATCTGTGAG	NA	False	NA	-5	True	AATAAA	-32	NA	116456297	116424816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
Isoform_47517_5	chr3	-	1655	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	393	3677	0	6	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGGGTTTTATATCTA	2189	False	NA	6	True	AATATA	-20	NA	116505906	116466795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
Isoform_47519_3	chr3	-	5064	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	403	258	10	-258	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACATATAGTTTTCT	2199	False	NA	-28	True	AATAGA	-25	NA	116505896	116463376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
Isoform_47520_4	chr3	-	5118	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-78	4585	-78	-1533	multi-exon	TRUE	canonical	3	13	junction_28	10.2172903022423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	116601893	116538232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
Isoform_47521_6	chr3	-	1819	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-30	232	-30	-8	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGGTGTCTATGATGT	NA	False	NA	NA	False	AATAAA	-12	NA	117662615	117575527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
Isoform_47523_5	chr3	-	3230	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	293	254	-123	-254	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGAGGTTTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	119577160	119512644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
Isoform_47524_3	chr3	-	3227	14	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-123	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.1094644925094	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGGAGGTTTGATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	119577160	119512645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555426_119575152_119575184_119576850
Isoform_47525_7	chr3	-	1027	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	13	444	6	1	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120965331	120949490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
Isoform_47526_6	chr3	-	1473	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	2	9	1	-7	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAAGGACTCTTGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	120965342	120949055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
Isoform_47527_6	chr3	-	2508	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	109	3	109	-3	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGTTTGTTCATCT	NA	False	NA	NA	False	AATAAA	-17	NA	121325944	121253179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
Isoform_47528_74	chr3	-	3368	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	119	2	14	-2	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACATGTGCCTGACCTT	7250	False	NA	-3	True	ATTAAA	-20	NA	121608832	121552557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
Isoform_47529_7	chr3	-	2404	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	89	996	-16	-147	multi-exon	FALSE	canonical	3	145	junction_14	20.5277981251709	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTTATGGCTCTGTC	7220	False	NA	NA	False	NA	NA	NA	121608862	121553551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
Isoform_47530_11	chr3	-	4000	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTACTTATCTTTTA	NA	False	NA	0	True	AATAAA	-23	NA	122413361	122332368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
Isoform_47532_6	chr3	-	5212	14	NNC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	-12	3	intron_retention	FALSE	non_canonical	0	0	junction_4	23.7663677638463	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGTGTACTTATCTTT	NA	False	NA	-2	True	AATAAA	-21	NA	122413376	122332370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340724_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
Isoform_47534_15	chr3	-	579	5	ISM	ENSMUSG00000039735.17	ENSMUST00000239148.2	5357	15	-12	30028	-12	-10844	5prime_fragment	FALSE	canonical	3	69	junction_3	10.8714074525794	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAACAGTGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	122413376	122362401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
Isoform_47537_3	chr3	-	1965	12	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	85	19803	46	1	5prime_fragment	FALSE	canonical	3	36	junction_1	5.05016160448405	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAAAAGATAAAAGACA	NA	False	NA	NA	False	ATTAAA	-39	NA	122778074	122744944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
Isoform_4754_4	chr11	-	1190	4	ISM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-8	4899	-8	-4899	5prime_fragment	FALSE	canonical	3	397	junction_3	38.0292285252044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAAAGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	5492195	5483785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_5484381_5484764_5484990_5491372_5491424_5491876
Isoform_47540_95	chr3	-	2612	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	130	-1	7	1	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCCTTAGAT	NA	False	NA	-1	True	AATAAA	-18	NA	123179627	123161944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
Isoform_47545_14	chr3	-	2399	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	76.5041756304118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTTTGTTTTCCTTAG	NA	False	NA	-3	True	AATAAA	-16	NA	123179627	123161946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_123163340_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
Isoform_47546_87	chr3	-	379	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	68	1	-3	-1	multi-exon	FALSE	canonical	3	427	junction_1	15.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCCTGTTTCTGG	NA	False	NA	47	True	AATAAA	-20	NA	123301985	123301201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_123301310_123301465_123301512_123301760
Isoform_47547_3	chr3	-	3528	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-34	246	-34	-11	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAAATGTTGTTGG	NA	False	NA	NA	False	AATAAA	-10	NA	125732302	125659165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
Isoform_47549_92	chr3	-	2029	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	91	1	-61	-1	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGGTTTTATTTAC	NA	False	NA	-2	True	AATAAA	-16	NA	127346907	127330363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_47550_58	chr3	-	2096	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	24	1	22	-1	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGGTTTTATTTAC	NA	False	NA	-2	True	AATAAA	-16	NA	127346974	127330363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_47554_105	chr3	-	784	6	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	3	9771	1	-14	5prime_fragment	FALSE	canonical	3	772	junction_1	64.3011663968858	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCAGGTGAGTGCTTA	NA	False	NA	NA	False	AAAACA	-19	NA	127346995	127340133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_47555_124	chr3	-	687	6	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	100	9771	-52	-14	5prime_fragment	FALSE	canonical	3	772	junction_1	64.3011663968858	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCAGGTGAGTGCTTA	NA	False	NA	NA	False	AAAACA	-19	NA	127346898	127340133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
Isoform_47556_4	chr3	-	790	5	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-61	-5	intron_retention	FALSE	canonical	3	772	junction_1	71.8448849953843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCTTACTTAGAGTG	NA	False	NA	NA	False	AAAACA	-28	NA	127346907	127340124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
Isoform_47557_71	chr3	-	2651	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	14	-3	14	-2	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATCATGGCTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	127631146	127600657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_47558_145	chr3	-	2607	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	57	-2	57	2	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCATCATGGCTTCA	NA	False	NA	-14	True	AATAAA	-18	NA	127631103	127600658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_47561_11	chr3	-	2600	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATCATGGCTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	127631121	127600657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
Isoform_47562_6	chr3	-	2545	9	FSM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	26	9	14	-4	multi-exon	FALSE	canonical	3	8	junction_4	148.476376487979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGATATTTGCATCATG	NA	False	NA	-20	True	AATAAA	-12	NA	127631146	127600664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
Isoform_47565_14	chr3	-	2237	3	NIC	ENSMUSG00000074238.7	novel	198	4	NA	NA	39	0	intron_retention	FALSE	canonical	3	416	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	127631121	127614395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_127616260_127616913_127616963_127630797
Isoform_47567_409	chr3	-	991	6	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	542	2	78	-2	3prime_fragment	FALSE	canonical	3	1505	junction_2	175.642136174666	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	-3	True	AATAAA	-20	NA	129624503	129618562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243
Isoform_47569_134	chr3	-	1269	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	0	2	0	-2	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	-3	True	AATAAA	-20	NA	129625045	129618562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
Isoform_47570_404	chr3	-	1031	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	240	0	204	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129624805	129618560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
Isoform_47573_22	chr3	-	4669	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	35	424	35	260	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854521	129776831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
Isoform_47574_5	chr3	-	4583	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	94	257	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	37.0104855637786	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGTTTGGTGGTTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	129854462	129776834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129834444_129834467_129835097_129854217
Isoform_47576_3	chr3	-	4555	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	36	252	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGACAGTTGGTTTGGTG	NA	False	NA	-12	True	ATTAAA	-9	NA	129854520	129776839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
Isoform_47577_763	chr3	-	1030	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	29	8	1	-1	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAGAGTGTGGACTT	NA	False	NA	-7	True	AATAAA	-16	NA	130503064	130489568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
Isoform_4758_54	chr11	-	873	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-18	-155	2	155	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657685	5654170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5654733_5657297_5657410_5657486
Isoform_47582_246	chr3	-	606	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	16	2	0	1	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCGTTATCTGTGATT	NA	False	NA	-13	True	AATAAA	-18	NA	130523970	130520481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
Isoform_47584_27	chr3	-	534	5	FSM	ENSMUSG00000062006.13	ENSMUST00000196202.5	495	5	0	-39	0	2	multi-exon	FALSE	canonical	3	274	junction_4	3611.9776092883	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCTTCCGTTATCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	130523970	130520485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523837
Isoform_47585_858	chr3	-	433	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	55	-8	-1	0	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	False	NA	-11	True	AATAAA	-20	NA	130523992	130520479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
Isoform_47586_232	chr3	-	462	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	20	-2	20	2	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCTTCCGTTATCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	130524027	130520485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
Isoform_4759_141	chr11	-	717	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-11	-6	9	6	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTCTCTCTCTCTTTCTT	NA	False	NA	-19	True	AATAAA	-24	NA	5657678	5654319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5654733_5657297_5657410_5657486
Isoform_47590_639	chr3	-	1707	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	53	29	-24	-29	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAAAATCCTTAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	131065697	131027096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
Isoform_47592_11	chr3	-	1297	6	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	24066	-29	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	295.64343388616	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAAAATCCTTAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	131041607	131027096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131041557
Isoform_47594_317	chr3	-	1085	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	38	3	-9	-3	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTTGCTCATTTT	NA	False	NA	-19	True	AATAAA	-28	NA	132389607	132366262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
Isoform_47599_15	chr3	-	3504	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	False	NA	-3	True	NA	NA	NA	132797587	132687512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
Isoform_47602_6	chr3	-	4144	7	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	66	15219	0	-2	5prime_fragment	FALSE	canonical	3	102	junction_6	28.6845874217419	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	133250063	133184818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_47603_4	chr3	-	3963	6	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-25997	-2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_5	41.9494934415185	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	133212440	133184818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
Isoform_47604_9	chr3	-	3833	6	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	66	16297	0	-1080	5prime_fragment	FALSE	canonical	3	102	junction_5	30.970954134479	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAAGTGGGTTTAGACC	NA	False	NA	NA	False	NA	NA	NA	133250063	133185896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_47605_3	chr3	-	4407	4	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	76	18516	-6	-3299	5prime_fragment	FALSE	canonical	3	102	junction_3	19.9387952383176	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAACAAATTCCCAC	NA	False	NA	NA	False	NA	NA	NA	133250053	133188115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_133189079_133191272_133194479_133219789_133219935_133249960
Isoform_4761_403	chr11	-	805	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	2	188	2	155	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657685	5654170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
Isoform_47612_15	chr3	-	806	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	497	2058	-21	1542	multi-exon	FALSE	canonical	3	215	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTATCCTTTGTTCT	NA	False	NA	-23	True	AATACA	-9	NA	135129189	135114230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_135114652_135116771_135116987_135129019
Isoform_47614_3	chr3	-	2829	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	529	3	8	-3	multi-exon	FALSE	canonical	3	215	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGTTTTCTTTTTTA	NA	False	NA	-2	True	ATTAAA	-17	NA	135129157	135112175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_135114652_135116771_135116987_135129019
Isoform_47615_8	chr3	-	1752	7	ISM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	14029	-226	-13	-1	3prime_fragment	FALSE	canonical	3	48	junction_1	5.39804491356722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTGATCTCTGCAA	NA	False	NA	-1	True	AATAAA	-24	NA	135300215	135290416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969
Isoform_47616_4	chr3	-	3846	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	267	4	267	-2	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATCTTGTCTGATCTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	135397040	135290419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
Isoform_47617_4	chr3	-	3062	10	NNC	ENSMUSG00000028159.15	novel	3083	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.47641647120907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCAACTTTTATAACA	NA	False	NA	NA	False	ATTAAA	-25	NA	137687306	137636767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_137638263_137638283_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
Isoform_47618_6	chr3	-	1417	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	-14	1680	-14	-4	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGGTTGCTTTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	137687320	137638447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
Isoform_47619_4	chr3	-	2681	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	7	-2	7	2	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTTCTAGTTGTATT	NA	False	NA	-7	True	ATTAAA	-17	NA	138195269	138164714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_4762_1297	chr11	-	652	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	2	341	2	2	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657685	5654323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
Isoform_47620_9	chr3	-	2553	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	138	-5	-9	5	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTAGTTGTATTTGT	NA	False	NA	-4	True	ATTAAA	-20	NA	138195138	138164711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_47622_51	chr3	-	1390	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	118	1178	1	-453	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGCCTCACCCCCTCA	NA	False	NA	-2	True	AATAAA	-25	NA	138195158	138165894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_47623_14	chr3	-	1502	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	6	1178	6	-453	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGCCTCACCCCCTCA	NA	False	NA	-2	True	AATAAA	-25	NA	138195270	138165894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
Isoform_47624_9	chr3	-	3687	15	FSM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	-88	-1	-24	1	multi-exon	FALSE	canonical	3	17	junction_4	20.5834538265222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780986	138631665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_47626_4	chr3	-	3544	14	NIC	ENSMUSG00000028149.13	novel	3598	15	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	23.9889027598451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780990	138631665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_47627_31	chr3	-	3694	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	-28	3	-28	1	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780990	138631665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_47629_28	chr3	-	3547	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	-159	-5	-28	1	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780990	138631665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
Isoform_4763_60	chr11	-	729	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	5	-231	2	2	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657685	5654323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5654733_5657297_5657556_5657623
Isoform_47630_9	chr3	-	1930	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	14	3072	14	18	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGAAATTTGAAGAA	7017	False	NA	NA	False	AAAACA	-41	NA	142101440	141948422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_47631_8	chr3	-	2395	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	5	2616	5	474	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTGTTTAGTGAGTG	7008	False	NA	NA	False	AATAAA	-19	NA	142101449	141947966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_47632_4	chr3	-	4992	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	26	-2	26	2	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7029	False	NA	-2	True	AATAAA	-21	NA	142101428	141945348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
Isoform_47640_8	chr3	-	5544	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	46	617	25	-617	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587719	142497279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
Isoform_47641_6	chr3	-	5575	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	15	617	1	-617	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587750	142497279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
Isoform_47644_6	chr3	-	1715	7	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	0	16515	0	5	5prime_fragment	FALSE	canonical	3	467	junction_2	29.0975371237269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGAATATCACTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	142587751	142527064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
Isoform_4765_54	chr11	-	3530	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-8	1567	-8	3	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTGAATGTATACTCA	8839	False	NA	-3	True	NA	NA	NA	5691158	5664983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
Isoform_47650_3	chr3	-	1174	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	310	185	270	-32	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	143910671	143894475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
Isoform_47651_39	chr3	-	2451	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-18	3744	-18	-3744	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTATTCTGGTATTTCT	NA	False	NA	-14	True	AGTAAA	-15	NA	144275960	144139210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_47654_3	chr3	-	4824	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-49	1402	-49	-1402	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTACTAGAGAACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	144275991	144136868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_47655_4	chr3	-	4233	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-20	1964	-20	-1964	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCAATGTGTGTGTG	NA	False	NA	NA	False	AGTAAA	-28	NA	144275962	144137430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
Isoform_47658_8	chr3	-	3972	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-13	2	-13	-2	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	144426109	144394606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_47659_18	chr3	-	1782	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-43	2222	-43	280	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGACTCATTTATTAG	NA	False	NA	-2	True	AATAAA	-16	NA	144426139	144396826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_47661_84	chr3	-	1736	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	4	2221	4	281	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGACTCATTTATTAGA	NA	False	NA	-1	True	AATAAA	-17	NA	144426092	144396825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_47668_20	chr3	-	802	4	ISM	ENSMUSG00000037062.14	ENSMUST00000199854.5	1416	10	-173	15252	-43	-14620	5prime_fragment	FALSE	canonical	3	318	junction_2	5.35412613473634	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGGAAAATGATCCA	NA	False	NA	1	True	AAGAAA	-32	NA	144426139	144412358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_144412493_144414993_144415123_144418347_144418490_144425742
Isoform_47669_69	chr3	-	2021	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	-2	0	2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTATGTTGTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	145355736	145352728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
Isoform_4767_5	chr11	-	3743	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-224	1570	-224	0	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAGTTGAATGTATAC	8623	False	NA	-6	True	NA	NA	NA	5691374	5664986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
Isoform_47670_14	chr3	-	2052	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	-31	-2	-31	2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTATGTTGTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	145355767	145352728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
Isoform_47672_259	chr3	-	1252	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	18	391	0	-3	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTAGGTATTAAAG	NA	False	NA	-6	True	AATAAA	-22	NA	146227166	146212101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
Isoform_47674_3	chr3	-	4398	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-61	10	-31	-10	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGATAAAAGCTATTGAGT	2637	False	NA	NA	False	ATTAAA	-10	NA	146518776	146435338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
Isoform_47675_3	chr3	-	4277	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	67	3	67	-3	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTATTGAGTCTTCTGT	2765	False	NA	NA	False	ATTAAA	-17	NA	146518648	146435331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
Isoform_47676_7	chr3	-	2376	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-32	115	-32	-115	multi-exon	FALSE	canonical	3	8	junction_3	4.18993502999218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTACTGTCTTCTG	NA	False	NA	NA	False	AATATA	-10	NA	151915752	151889733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
Isoform_47677_3	chr3	-	2488	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-32	3	-32	-3	multi-exon	TRUE	canonical	3	8	junction_3	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCTATAGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	151915752	151889621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
Isoform_47678_3	chr3	-	2423	4	NIC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	-31	-113	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTGTCTTCTGTT	NA	False	NA	NA	False	AATATA	-12	NA	151915751	151889731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_151891018_151892051_151892621_151899013_151899302_151915471
Isoform_47679_4	chr3	-	2134	3	NIC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	-32	-115	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTACTGTCTTCTG	NA	False	NA	NA	False	AATATA	-10	NA	151915752	151889733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_151891018_151892051_151892621_151915471
Isoform_47680_112	chr3	-	2861	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	23	2081	0	1	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAATTAAAAATGTA	NA	False	NA	NA	False	ATTAAA	-25	NA	152046021	151981566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_47681_64	chr3	-	4966	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	10	-11	8	11	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGACTGTCACTTTGTT	NA	False	NA	-23	True	AATAAA	-24	NA	152046034	151979474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_47682_3	chr3	-	2975	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-92	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.6514131346665	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAATTAAAAATGTA	NA	False	NA	NA	False	ATTAAA	-25	NA	152046136	151981566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990973_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_47683_47	chr3	-	1705	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-18	38373	4	11445	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCTCTTAACTGTGG	NA	False	NA	-2	True	NA	NA	NA	152046038	152025586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
Isoform_47685_36	chr3	-	2960	5	FSM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	7	5202	7	1898	multi-exon	FALSE	canonical	3	78	junction_2	13.3674043852949	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGTTGTTTTCTCT	NA	False	NA	-5	True	AATAAA	-23	NA	153430804	152909104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153430681
Isoform_47686_23	chr3	-	2351	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134273	1898	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGTTGTTTTCTCT	NA	False	NA	-5	True	AATAAA	-23	NA	153065693	152909104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_152911229_152912254_152912363_153065574
Isoform_47687_5	chr3	-	747	2	ISM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	4	310611	4	0	5prime_fragment	FALSE	canonical	3	96	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153430807	153214513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_153215135_153430681
Isoform_47689_3	chr3	-	1424	10	FSM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-25	0	3	0	multi-exon	FALSE	canonical	3	72	junction_9	303.195735987477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
Isoform_4769_5	chr11	-	3673	7	NNC	ENSMUSG00000049680.18	novel	4208	7	NA	NA	256	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8822118237389	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAATGTATACTCAA	NA	False	NA	-2	True	NA	NA	NA	5712115	5664982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_5665618_5665648_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
Isoform_47690_11	chr3	-	1406	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47691_5	chr3	-	1297	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-8	7	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCAGTTTTTG	6108	False	NA	-22	True	AATAAA	-23	NA	153618638	153613083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47692_3	chr3	-	1309	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_5	287.890359989702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6154	False	NA	-4	True	AATAAA	-44	NA	153618592	153612927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47694_5	chr3	-	1573	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000200209.5	1169	9	-122	-282	1	-1	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6906	False	NA	-3	True	AATAAA	-45	NA	153617840	153612926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
Isoform_47695_9	chr3	-	1422	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47697_3	chr3	-	1479	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6098	False	NA	-4	True	AATAAA	-44	NA	153618648	153612927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47698_3	chr3	-	1347	9	NIC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	331.806584285183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618550
Isoform_47699_32	chr3	-	1331	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	50	0	-4	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6150	False	NA	-2	True	AATAAA	-15	NA	153618596	153612925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_477_830	SIRV6	+	453	3	FSM	SIRV6A	SIRV611	454	3	1	0	1	0	multi-exon	FALSE	canonical	3	2656	junction_1	12443	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1304	1950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_1382_1468_1535_1640
Isoform_4770_4	chr11	-	3296	3	Fusion	ENSMUSG00000020477.11_ENSMUSG00000049680.18	novel	394	5	NA	NA	3	3	multi-exon	FALSE	non_canonical	0	0	junction_1	1.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTGAATGTATACTCA	8854	False	NA	-3	True	NA	NA	NA	5691143	5664983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr11_-_5665618_5665648_5668264_5691096
Isoform_47701_5	chr3	-	1243	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	-27	165	-27	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6073	False	NA	-29	True	AATAAA	-16	NA	153618673	153613090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47702_3	chr3	-	1355	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	23	3	7	1	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTTGTGTATATAGC	6123	False	NA	-5	True	AATAAA	-43	NA	153618623	153612928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
Isoform_47705_370	chr3	-	1859	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	186	2	0	-2	multi-exon	FALSE	canonical	3	875	junction_11	59.2580851965116	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTCTGACTCTCCA	178	False	NA	-8	True	AATAAA	-14	NA	153650083	153627995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_47706_255	chr3	-	1886	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	161	0	-4	0	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	153	False	NA	-6	True	AATAAA	-16	NA	153650108	153627993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_47707_13	chr3	-	2063	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	-18	2	-18	-2	multi-exon	FALSE	canonical	3	875	junction_11	59.2580851965116	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTCTGACTCTCCA	NA	False	NA	-8	True	AATAAA	-14	NA	153650287	153627995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
Isoform_4771_15	chr11	-	828	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	14	-2	14	2	multi-exon	FALSE	canonical	3	39	junction_1	6	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGTTTCATATAGCTGA	8662	False	NA	NA	False	AATAAA	-17	NA	5753719	5751637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5751840_5752998_5753180_5753274
Isoform_47710_13	chr3	-	1961	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	875	junction_10	61.0908340096941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTCTCTGACTCTCC	178	False	NA	-9	True	AATAAA	-13	NA	153650083	153627996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644805_153647519_153647608_153650032
Isoform_47716_3	chr3	-	1791	8	ISM	ENSMUSG00000096225.8	ENSMUST00000177846.8	2076	9	2114	1	89	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	3.13635691430002	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTGCCCACTTCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	154034182	154011931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_154012643_154017176_154017361_154022379_154022476_154027263_154027368_154027877_154028099_154030178_154030301_154033641_154033804_154033991
Isoform_47717_4	chr3	-	4384	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	15	91	15	-2	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTCTGTTCTGTTGC	NA	False	NA	0	True	AATAAA	-18	NA	154302717	154282158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
Isoform_4772_70	chr11	-	2750	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	173	1	-50	-1	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	553	False	NA	NA	False	AATAAA	-17	NA	5787843	5777861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
Isoform_47720_5	chr3	-	3479	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	37	2	2	-2	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154799003	154790556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
Isoform_47723_895	chr3	-	1801	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	14	0	-12	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630700	157599884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
Isoform_4773_34	chr11	-	2897	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	25	2	25	-2	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAGTTTTACAAGTT	405	False	NA	NA	False	AATAAA	-16	NA	5787991	5777862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
Isoform_47730_25	chr3	-	2612	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	41	1	29	-1	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157737362	157716556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_47732_47	chr3	-	2624	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	34	448	1	-2	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742242	157716557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_47736_7	chr3	-	2641	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-46	-952	-1	2	multi-exon	TRUE	canonical	3	86	junction_3	173.80710492446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTCTGTAGAGCTGGG	NA	False	NA	-25	True	AATAAA	-19	NA	157742234	157716553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_47737_10	chr3	-	2653	12	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.613943339873	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157737405	157716556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_157717841_157717946_157718086_157718416_157718511_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_47738_19	chr3	-	2654	13	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	194.079934133679	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTCTGTAGAGCT	NA	False	NA	-28	True	AATAAA	-16	NA	157742273	157716556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_157717841_157717946_157718086_157718416_157718511_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_47744_17	chr3	-	1238	11	ISM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	-2	2307	-2	-429	5prime_fragment	FALSE	canonical	3	316	junction_10	104.06944796625	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGGTATCATTTATATC	NA	False	NA	-1	True	AAGAAA	-28	NA	157742278	157718416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_47745_63	chr3	-	1023	8	ISM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	21	5403	9	0	5prime_fragment	FALSE	canonical	3	622	junction_2	28.5228157868076	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGTGCAAAGCAGA	NA	False	NA	-2	True	NA	NA	NA	157737382	157721958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_47749_192	chr3	-	1017	9	ISM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-55	4453	0	0	5prime_fragment	FALSE	canonical	3	316	junction_8	116.256115430544	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGTGCAAAGCAGA	NA	False	NA	-2	True	NA	NA	NA	157742243	157721958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
Isoform_47750_12	chr3	-	832	6	ISM	ENSMUSG00000055436.19	ENSMUST00000137444.8	769	8	4847	-119	-2	79	3prime_fragment	FALSE	canonical	3	623	junction_4	28.7708185493566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATGCTCATACACATG	NA	False	NA	0	True	NA	NA	NA	157737405	157724948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
Isoform_47755_8	chr3	-	1551	2	FSM	ENSMUSG00000055436.19	ENSMUST00000197292.2	930	2	6	-627	-2	-6	multi-exon	FALSE	canonical	3	316	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157742245	157735827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157737286_157742152
Isoform_47756_94	chr3	-	589	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	0	-1453	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTTAAAAGACCCTAG	NA	False	NA	NA	False	NA	NA	NA	41447627	41439911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_41440396_41447522
Isoform_47757_12	chr3	-	537	2	NNC	ENSMUSG00000097639.3	novel	986	2	NA	NA	0	-1453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTTAAAAGACCCTAG	NA	False	NA	NA	False	NA	NA	NA	41447627	41439911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_41440396_41447574
Isoform_4776_104	chr11	-	1563	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	75	8	-5	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9580	False	NA	-6	True	AATAAA	-17	NA	5828217	5822187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
Isoform_47760_13	chr3	-	2529	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-12	8	intron_retention	FALSE	canonical	3	32	junction_1	184.861793383763	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATACCTACCTTGTCCAA	NA	False	NA	1	True	ATTAAA	-19	NA	88821250	88815925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_88816760_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
Isoform_47761_13	chr3	-	1205	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	0	-5	multi-exon	FALSE	canonical	3	17	junction_1	26.5455583227527	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGCAAGCTCTCCTT	NA	False	NA	-15	True	AGTAAA	-11	NA	41447627	41432016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr3_-_41432596_41436231_41436380_41436506_41436880_41447522
Isoform_47764_9	chr3	-	834	2	NNC	ENSMUSG00000028126.17	novel	724	2	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGCT	1243	False	NA	NA	False	AATAAA	-20	NA	95014196	95004366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_95004691_95013686
Isoform_47765_6	chr3	-	450	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	53026128	53020956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_-_53021169_53025890
Isoform_47768_7	chr3	+	2964	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	127.207521790183	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600278	54636181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_47769_16	chr3	+	2956	26	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	117.502789754116	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGTGTCTGTTCAT	NA	False	NA	33	True	TATAAA	-44	NA	54600284	54636182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_4777_21	chr11	-	456	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	766	2	766	-2	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTGTTGGCTTGAC	NA	False	NA	0	True	AATAAA	-18	NA	5848016	5846638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
Isoform_47770_6	chr3	+	3196	26	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	120.343840723155	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600282	54636183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_47772_3	chr3	+	572	2	ISM	ENSMUSG00000043542.13	ENSMUST00000193010.2	1420	8	-32	35122	-29	-34548	5prime_fragment	FALSE	canonical	3	164	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	7568513	7582013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_7568588_7581515
Isoform_47773_31	chr3	+	3210	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	0	82	0	-82	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAAACTGCTGCTTGT	NA	False	NA	-72	True	AATAAA	-7	NA	7568542	7618814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
Isoform_47774_12	chr3	+	1244	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-32	2080	-32	255	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGTCATTCAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	7568510	7616816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
Isoform_47776_3	chr3	+	3331	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-40	1	-40	-1	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCTTTTTTTTCTTG	NA	False	NA	9	True	NA	NA	NA	7568502	7618895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
Isoform_47777_3	chr3	+	3117	8	NIC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	0	-75	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	66.9154202660923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGCTTGTTATGTTT	NA	False	NA	-65	True	AATAAA	-14	NA	7568542	7618821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7604135_7604244_7616442
Isoform_47778_123	chr3	+	1905	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	167	1	12	-1	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGGTTTGGTCTGGTCT	NA	False	NA	22	True	AATAAA	-22	NA	8574586	8626665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_47781_449	chr3	+	800	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	167	1106	12	-1075	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTTGCTTGATGTTT	NA	False	NA	20	True	NA	NA	NA	8574586	8625560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_47785_20	chr3	+	828	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	139	1106	-16	-1075	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTTGCTTGATGTTT	NA	False	NA	20	True	NA	NA	NA	8574558	8625560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
Isoform_4779_11	chr11	-	721	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	89	1	89	-1	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGTGTTGGCTTGACT	NA	False	NA	1	True	AATAAA	-19	NA	5848693	5846637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
Isoform_47790_21	chr3	+	901	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAACGGTTTGGTCTGGT	NA	False	NA	20	True	AATAAA	-20	NA	8574586	8626663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
Isoform_47792_667	chr3	+	678	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	43	266	-14	6	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGGGTTCTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	10077650	10081401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
Isoform_47796_21	chr3	+	3664	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	41	2483	-10	-2483	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATTAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10432007	10457914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_47797_73	chr3	+	1209	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	41	4938	-10	-4938	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTCTAGTGAGTCTATG	NA	False	NA	9	True	AATAAA	-18	NA	10432007	10455459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_4780_5	chr11	-	4014	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-42	-1999	-12	-2	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	2998	False	NA	NA	False	NA	NA	NA	6015624	5919669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47801_7	chr3	+	1095	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	13	5080	13	-5080	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATACATATTCCAGTTT	NA	False	NA	NA	False	NA	NA	NA	10431979	10455317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
Isoform_47803_3	chr3	+	2767	16	ISM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	28	5969	27	169	5prime_fragment	FALSE	canonical	3	53	junction_7	12.685249526736	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATACACTACTTGCCA	NA	False	NA	NA	False	AAGAAA	-17	NA	14598910	14627392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183
Isoform_47804_10	chr3	+	2794	17	ISM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	62	5817	6	321	5prime_fragment	FALSE	canonical	3	53	junction_7	12.7328315782468	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGTAAAAGAAAAATT	NA	False	NA	NA	False	GATAAA	-34	NA	14598944	14627544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483
Isoform_47806_4	chr3	+	808	5	ISM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	15	3538	-15	-3537	5prime_fragment	FALSE	canonical	2	153	junction_3	26.8607520371266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCTA	1937	False	NA	NA	False	NA	NA	NA	14643715	14667831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707
Isoform_47807_57	chr3	+	1721	8	FSM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	51	7	21	-6	multi-exon	FALSE	canonical	2	153	junction_3	25.3191868844518	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTATTGATCTTTGGGG	1973	False	NA	23	True	AATAAA	-16	NA	14643751	14671362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_47809_4	chr3	+	1845	9	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	86.9079074365503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTATTGATCTTTGGG	1919	False	NA	22	True	AATAAA	-15	NA	14643697	14671361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_14644084_14646195_14646267_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
Isoform_47810_53	chr3	+	1092	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	16	1191	16	-1191	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCCTTCCTGACAATA	2195	False	NA	13	True	ATTAAA	-18	NA	14706802	14726871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_47811_3	chr3	+	1197	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	24	1078	24	-1078	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACTTTGAACTGATAT	2203	False	NA	NA	False	GATAAA	-8	NA	14706810	14726984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_47812_3	chr3	+	1154	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	-51	1196	-51	-1196	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTCAGCCTTCCTGA	2128	False	NA	8	True	ATTAAA	-13	NA	14706735	14726866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
Isoform_47813_6	chr3	+	1754	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951283	14965830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_47815_5	chr3	+	1933	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	-145	0	10	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951342	14965830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_47816_34	chr3	+	1525	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	263	0	52	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951750	14965830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_47818_9	chr3	+	1774	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	14	0	14	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951501	14965830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
Isoform_47819_3	chr3	+	5092	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	18	-181	18	-1	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCTTTCCTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	16237417	16271200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
Isoform_4782_6	chr11	-	3944	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-26	1	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2938	False	NA	NA	False	NA	NA	NA	6015684	5919670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47820_3	chr3	+	5089	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	12	1	-12	-1	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCTTTCCTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	16237387	16271200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
Isoform_47821_5	chr3	+	4402	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	11	689	11	-507	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGACATTATTGGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	16237386	16270512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
Isoform_47822_369	chr3	+	2805	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	142	6	-13	-6	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTATTTGTATATT	NA	False	NA	44	True	AATAAA	-30	NA	19242415	19274975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_47827_16	chr3	+	3366	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	18	-9	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTATCTATTTGTAT	NA	False	NA	41	True	AATAAA	-27	NA	19242455	19274972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
Isoform_47836_24	chr3	+	4928	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	20	7	11	7	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6958	False	NA	9	True	AATAAA	-13	NA	20111994	20172647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
Isoform_47838_13	chr3	+	3900	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTACCTTCTTTGGTG	6946	False	NA	3	True	AATAAA	-7	NA	20111982	20172641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
Isoform_47839_3	chr3	+	2444	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	54	5739	-21	276	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTGCGGCAGTAGTT	NA	False	NA	13	True	NA	NA	NA	22130869	22265019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_4784_3	chr11	-	3825	20	NIC	ENSMUSG00000057897.15	novel	1875	21	NA	NA	10	-2	intron_retention	FALSE	canonical	2	4	junction_5	42.1330829147391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	2974	False	NA	NA	False	NA	NA	NA	6015648	5919669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47840_4	chr3	+	3065	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-73	1217	2	-434	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTCTCAAAGTGTCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	22130817	22265698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_47842_4	chr3	+	2387	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-73	1895	2	277	multi-exon	TRUE	canonical	3	160	junction_1	26.4420540469575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGCGGCAGTAGTTG	NA	False	NA	14	True	NA	NA	NA	22130817	22265020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
Isoform_47844_20	chr3	+	4463	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	16	1	16	-1	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGCCTCTGGCCCTTCC	5584	False	NA	9	True	AATAAA	-16	NA	27237129	27299106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
Isoform_4785_15	chr11	-	3825	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	48	-2001	-36	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2928	False	NA	NA	False	NA	NA	NA	6015694	5919670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47854_3	chr3	+	4861	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	-15	3	-15	2	multi-exon	TRUE	canonical	1	4	junction_2	5.02258214078643	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGATGGTGAAATCATTT	8191	False	NA	NA	False	AATAAA	-21	NA	27992828	28187385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
Isoform_47855_3	chr3	+	3544	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	5	1478	5	-1478	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAAGCTATCTGGTAA	NA	False	NA	4	True	AATAAA	-16	NA	28835429	28851517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_47856_3	chr3	+	5020	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	4	3	4	-3	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGTTCTTAA	NA	False	NA	16	True	AATAAA	-19	NA	28835428	28852992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_47857_5	chr3	+	3509	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	49	1469	49	-1469	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGGTAAGTGTTTGGT	NA	False	NA	13	True	AATAAA	-25	NA	28835473	28851526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
Isoform_47858_16	chr3	+	546	4	FSM	ENSMUSG00000039221.11	ENSMUST00000193168.2	552	4	1	5	1	1	multi-exon	FALSE	canonical	3	450	junction_2	3246.42750659175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTATGGTTCATC	NA	False	NA	12	True	AATAAA	-17	NA	28859659	28861566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
Isoform_47859_304	chr3	+	480	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	75	-3	1	2	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTATGGTTCATCA	NA	False	NA	13	True	AATAAA	-18	NA	28859659	28861567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
Isoform_4786_18	chr11	-	3743	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	130	-2001	0	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	3010	False	NA	NA	False	NA	NA	NA	6015612	5919670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47862_46	chr3	+	544	4	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	450	junction_2	3086.0505864652	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTATGGTTCATCA	NA	False	NA	13	True	AATAAA	-18	NA	28859659	28861567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_28859693_28860651_28860742_28860818_28861008_28861335
Isoform_47863_516	chr3	+	477	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	42	6	1	2	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTATGGTTCATCA	NA	False	NA	13	True	AATAAA	-18	NA	28859659	28861567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
Isoform_47869_10	chr3	+	2672	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-18	820	-5	-687	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTTGGCTTCTAAATT	8774	False	NA	NA	False	AATAAA	-42	NA	30656774	30671830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_4787_7	chr11	-	3885	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	-12	-2001	-6	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	2868	False	NA	NA	False	NA	NA	NA	6015754	5919670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47872_8	chr3	+	2900	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-16	590	-3	-457	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATAGTGTCCTTTCCG	8776	False	NA	NA	False	ATTAAA	-27	NA	30656776	30672060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_47873_4	chr3	+	3436	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-36	74	-23	59	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTCAGCTAATCTTT	8756	False	NA	NA	False	AATAAA	-14	NA	30656756	30672576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_47877_17	chr3	+	2797	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	566	2192	0	-687	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTTGGCTTCTAAATT	8779	False	NA	NA	False	AATAAA	-42	NA	30656779	30671830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_47880_5	chr3	+	4493	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	571	491	-1	-491	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTTAAATTCCATAG	8784	False	NA	NA	False	AATAAA	-18	NA	30656784	30673531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
Isoform_47883_8	chr3	+	1715	2	ISM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	113	20942	113	-20942	5prime_fragment	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAACAAAAAATAAAC	NA	False	NA	NA	False	ACTAAA	-40	NA	30702147	30705506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_30702410_30704053
Isoform_47885_6	chr3	+	2135	6	FSM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	88	-131	88	-1	multi-exon	FALSE	canonical	3	7	junction_1	18.0177690072883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTTGTGGGAAGAAT	NA	False	NA	4	True	NA	NA	NA	30702122	30726579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30702410_30704053_30705102_30709785_30709960_30713202_30713342_30714049_30714247_30726289
Isoform_47892_7	chr3	+	3514	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	452	1	-9	-1	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACGCAGTAGTGATGGAT	NA	False	NA	NA	False	AATAAA	-20	NA	30847475	30875411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
Isoform_47893_14	chr3	+	1902	5	NIC	ENSMUSG00000037661.15	novel	1977	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910095	30951339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
Isoform_47894_29	chr3	+	1783	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-41	-1396	2	-2	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCATTTTATTTGTTTT	NA	False	NA	30	True	AATAAA	-43	NA	30910100	30951337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
Isoform_47896_3	chr3	+	1691	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	-4	2	-4	0	multi-exon	FALSE	canonical	3	44	junction_2	125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910094	30951339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30910207_30931383_30931482_30949858
Isoform_47898_16	chr3	+	2019	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-37	-5	2	3	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910100	30951344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
Isoform_47899_5	chr3	+	2049	5	NIC	ENSMUSG00000037661.15	novel	754	5	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	77.9947914927657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910141	30951344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30948277_30948390_30949858
Isoform_47900_15	chr3	+	1932	4	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910141	30951339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
Isoform_47901_6	chr3	+	2161	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108258.8	2139	4	-22	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	77.1895214535122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910141	30951339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_30910395_30931383_30931711_30944090_30944191_30949858
Isoform_47904_317	chr3	+	4452	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	35	221	35	-221	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049930	31106887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
Isoform_47906_8	chr3	+	4635	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	56	17	56	-17	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	31049951	31107091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
Isoform_47907_7	chr3	+	4666	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	25	17	25	-17	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	31049920	31107091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
Isoform_4791_7	chr11	-	1992	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	22	-142	22	38	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTCCACTGTGTCTGTT	2902	False	NA	-5	True	AAAAAG	-38	NA	6015720	5921529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
Isoform_47918_4	chr3	+	6567	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	7	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGAAGTTTGGTTCAAG	NA	False	NA	10	True	AATAAA	-12	NA	31149213	31176718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
Isoform_47920_43	chr3	+	1824	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	291	96	15	-6	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGGGCAAGCTGAAA	3197	False	NA	16	True	AATAAA	-16	NA	32564698	32574886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_47922_31	chr3	+	1899	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	85	4	-44	-4	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGGCAAGCTGAAATA	3267	False	NA	18	True	AATAAA	-18	NA	32564768	32574888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
Isoform_47925_227	chr3	+	2971	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	29	1562	29	324	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32583642	32631826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_47928_4	chr3	+	5166	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	6	-610	6	610	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAATGGATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	32583619	32633998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_47932_494	chr3	+	1832	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	174	4	-84	1	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762829	32781118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
Isoform_47935_19	chr3	+	1999	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	8	3	8	2	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGATTTGTCT	NA	False	NA	20	True	AATAAA	-17	NA	32762663	32781119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
Isoform_47939_17	chr3	+	1701	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-48	2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	397.893227930978	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGATTTGTCT	NA	False	NA	20	True	AATAAA	-17	NA	32762865	32781119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
Isoform_4794_64	chr11	-	3380	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	253	294	253	1	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9711	False	NA	-5	True	AATAAA	-15	NA	6150162	6055984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_47942_1345	chr3	+	662	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	86	331	0	5	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGGCTGGTTCTT	NA	False	NA	28	True	AATAAA	-30	NA	32791224	32805384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
Isoform_47943_88	chr3	+	986	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	86	7	0	-7	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTAGCATCTTGCTTTA	NA	False	NA	3	True	AATAAA	-17	NA	32791224	32805708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
Isoform_47949_14	chr3	+	2748	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	43	4789	18	-4	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32871737	32987431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
Isoform_4795_56	chr11	-	3404	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	229	294	229	1	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9687	False	NA	-5	True	AATAAA	-15	NA	6150186	6055984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_47950_3	chr3	+	671	3	FSM	ENSMUSG00000027677.18	ENSMUST00000200559.2	680	3	12	-3	4	3	multi-exon	FALSE	canonical	3	164	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	33854343	33855643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_33854586_33855104_33855230_33855339
Isoform_47955_6	chr3	+	2793	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-25	-84	13	84	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTTAAGTGATAAATT	NA	False	NA	9	True	ATTAAA	-15	NA	33854374	33864177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
Isoform_47964_27	chr3	+	3047	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-6	3593	-3	-3585	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACCAATTTTTGCATT	4853	False	NA	1	True	AATAAA	-10	NA	34074250	34119901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
Isoform_47966_9	chr3	+	2211	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4853	False	NA	15	True	ATTAAA	-18	NA	34074250	34123489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
Isoform_47969_230	chr3	+	2126	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-6	9	-3	-1	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAAATGTTATTTTGT	4853	False	NA	11	True	ATTAAA	-14	NA	34074250	34123485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_47970_63	chr3	+	2762	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-6	-627	-3	-350	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4853	False	NA	10	True	AATAAA	-14	NA	34074250	34124121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_47974_167	chr3	+	2036	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-6	984	-3	1	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4853	False	NA	13	True	ATTAAA	-16	NA	34074250	34123487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_47975_47	chr3	+	2670	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-6	350	-3	-350	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4853	False	NA	10	True	AATAAA	-14	NA	34074250	34124121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_47976_17	chr3	+	2219	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4850	False	NA	14	True	ATTAAA	-17	NA	34074247	34123488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_47977_8	chr3	+	2861	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-8	-350	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4841	False	NA	10	True	AATAAA	-14	NA	34074238	34124121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
Isoform_47978_16	chr3	+	2139	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-16	4	-9	-1	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTATTTTGTTTTCA	4840	False	NA	16	True	ATTAAA	-19	NA	34074237	34123490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
Isoform_47982_22	chr3	+	4873	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-6	1	-6	1	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTGTTGCATGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	35808276	35910424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
Isoform_47984_16	chr3	+	4900	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-33	1	-5	1	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTGTTGCATGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	35808249	35910424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
Isoform_47985_16	chr3	+	2535	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	0	1395	0	86	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGCTCCTCCACT	NA	False	NA	9	True	AATAAA	-28	NA	36120127	36145607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_47986_118	chr3	+	2459	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	76	1395	-12	86	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGCTCCTCCACT	NA	False	NA	9	True	AATAAA	-28	NA	36120203	36145607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_47989_14	chr3	+	3864	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	76	-10	-12	10	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAGGAATTTGTTAAT	NA	False	NA	15	True	NA	NA	NA	36120203	36147012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_4799_3	chr11	-	3260	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	229	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	148.998951338592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9687	False	NA	-5	True	AATAAA	-15	NA	6150186	6055984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6058356_6063242_6063432_6100494_6100628_6143153_6143477_6149942
Isoform_47991_4	chr3	+	3907	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	21	2	21	-2	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCCTTTTTACCAAG	NA	False	NA	3	True	NA	NA	NA	36120148	36147000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
Isoform_47994_7	chr3	+	2672	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	57	3960	57	3708	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTCAACCGGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	36205222	36220531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
Isoform_47995_4	chr3	+	3189	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	84	3416	-61	-3409	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	36205249	36221075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
Isoform_47998_83	chr3	+	1595	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	21	1	0	-1	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGAGAGCCGAATGAG	NA	False	NA	14	True	AATAAA	-22	NA	36606775	36619875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
Isoform_48_1581	ERCC-00046	+	503	1	FSM	ERCC-00046A	DQ516748	506	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1581	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	2	505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00046_+_0_500
Isoform_4800_3	chr11	-	3316	4	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	250	17234	250	0	5prime_fragment	FALSE	canonical	3	343	junction_3	16.1107279647928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAACAA	9708	False	NA	NA	False	NA	NA	NA	6150165	6072924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_6075562_6100494_6100628_6143153_6143477_6149942
Isoform_48002_15	chr3	+	2446	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	-14	1	-14	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCCATTCTGTTTTT	1237	False	NA	6	True	AATAAA	-18	NA	37366688	37375598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37366735_37373198
Isoform_48004_41	chr3	+	2906	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	5	5	5	1	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474465	37633240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
Isoform_48005_4	chr3	+	2826	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-28	118	-14	-31	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGAGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	37474432	37633127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
Isoform_48006_163	chr3	+	2874	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	421	0	5	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474465	37633245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_48007_10	chr3	+	2781	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	391	123	-11	-36	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTCTTGAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	37474435	37633122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_48008_4	chr3	+	3292	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	-2	5	-2	1	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474042	37633240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_48009_6	chr3	+	2734	15	NIC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	1	18	junction_14	113.124998590596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474435	37633240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
Isoform_48010_16	chr3	+	2933	17	NIC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_15	130.436227233848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474435	37633240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
Isoform_48011_39	chr3	+	2871	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	19	0	5	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474465	37633245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
Isoform_48012_3	chr3	+	2199	2	NIC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	-46	-9	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCGGCTCTCGAGTGCA	NA	False	NA	NA	False	TATAAA	-44	NA	37694049	37698738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_37694214_37696703
Isoform_48013_28	chr3	+	2247	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	-46	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694049	37698745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_37694255_37696703
Isoform_48015_35	chr3	+	1146	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50152	14	6	5prime_fragment	FALSE	canonical	3	119	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTGAGAACACCAAGTT	NA	False	NA	7	True	AATAAA	-23	NA	40594929	40609052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_40595159_40608135
Isoform_48016_3	chr3	+	1294	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50004	14	154	5prime_fragment	FALSE	canonical	3	119	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAGTATTTTTGC	NA	False	NA	NA	False	AATACA	-11	NA	40594929	40609200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_40595159_40608135
Isoform_48017_5	chr3	+	928	4	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	5	32148	5	18010	5prime_fragment	FALSE	canonical	3	18	junction_2	47.1475226166645	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGGCACAGTCGA	NA	False	NA	NA	False	NA	NA	NA	40594920	40627056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000
Isoform_48018_18	chr3	+	1590	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	25	513	25	-513	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAACTATTGTAATGAG	NA	False	NA	NA	False	AATAAA	-6	NA	40663309	40680014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
Isoform_48020_3	chr3	+	3773	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	38	5668	-16	851	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCTTTTGAAAACTTG	NA	False	NA	2	True	ATTAAA	-19	NA	40699899	40744870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
Isoform_48024_59	chr3	+	3454	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	24	1	1	0	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTATTGGCTAAAT	7809	False	NA	26	True	AATAAA	-22	NA	40754477	40771317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
Isoform_48030_5	chr3	+	3451	16	FSM	ENSMUSG00000025758.11	ENSMUST00000203895.3	3320	16	1	-132	1	0	multi-exon	FALSE	canonical	3	18	junction_4	89.82788480694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7809	False	NA	27	True	AATAAA	-23	NA	40754477	40771318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759446_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
Isoform_48031_6	chr3	+	2508	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-61	830	-2	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGGGTTCTGTCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	40848695	40890742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
Isoform_48032_6	chr3	+	1021	4	ISM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	0	13770	0	-23	5prime_fragment	FALSE	canonical	3	78	junction_1	6.34209919681348	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGAAGAGAAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	40904262	40918447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402
Isoform_48035_14	chr3	+	3319	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	10174	1	-5	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGGTGTATTAAC	NA	False	NA	-3	True	AATAAA	-9	NA	41510166	41561125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
Isoform_4804_22	chr11	-	1822	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-51	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATGTGGGAAAAGATT	4518	False	NA	-12	True	AATAAA	-29	NA	6217743	6208969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
Isoform_48043_77	chr3	+	4708	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	772	1	-20	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATAAAACAAAATG	NA	False	NA	NA	False	NA	NA	NA	41510166	41570527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
Isoform_4805_536	chr11	-	1924	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	29	3	3	-3	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGGTGTTGTCTGGCT	4518	False	NA	-5	True	NA	NA	NA	6217743	6208921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
Isoform_48055_3	chr3	+	849	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	37	2688	1	-80	multi-exon	TRUE	canonical	3	22	junction_1	8.72576007513895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAATTTTTACTTAAT	NA	False	NA	NA	False	AATAGA	-15	NA	41697089	41710686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
Isoform_48056_3	chr3	+	3528	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	37	9	1	0	multi-exon	FALSE	canonical	3	22	junction_1	8.72576007513895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	False	NA	3	True	ATTAAA	-13	NA	41697089	41713365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
Isoform_48057_3	chr3	+	2542	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	503	14	480	-1	multi-exon	FALSE	canonical	3	120	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTTGTCTCTTTGGT	9649	False	NA	13	True	AATAAA	-22	NA	51132370	51159051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_51132709_51155225_51155496_51157117
Isoform_4806_11	chr11	-	2276	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	29	-349	3	349	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGACCCCTCCTCCATGT	4518	False	NA	NA	False	AATATA	-15	NA	6217743	6208569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
Isoform_48061_11	chr3	+	4181	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-51	1960	-51	1807	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGTGAATATT	NA	False	NA	17	True	AATAAA	-10	NA	51323385	51381446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_48063_3	chr3	+	5588	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-28	530	-28	-530	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGACTAAAAGTAGTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	51323408	51382876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
Isoform_48065_18	chr3	+	2193	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	245	1054	245	-1054	multi-exon	FALSE	canonical	3	63	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGCTGACTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	51391631	51402599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_51392002_51400776
Isoform_48066_11	chr3	+	2939	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	224	329	224	-329	multi-exon	FALSE	canonical	3	63	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAAGCGTTTCTTTCTTT	NA	False	NA	1	True	AATAAA	-14	NA	51391610	51403324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_51392002_51400776
Isoform_48070_205	chr3	+	2460	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	73	6132	73	-6132	multi-exon	FALSE	canonical	3	61	junction_1	0	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52175829	52254510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_52176844_52252459_52253812_52254416
Isoform_48072_5	chr3	+	2117	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	52948939	53169100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
Isoform_48073_3	chr3	+	4573	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-98	-3	-98	3	multi-exon	FALSE	canonical	3	36	junction_11	9.75071222469871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAGAAGTGTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	53370988	53389179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
Isoform_48075_33	chr3	+	2867	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_6	101.803856252742	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48077_19	chr3	+	3104	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_6	104.992335589529	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48080_6	chr3	+	2629	20	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	6	12132	6	-333	5prime_fragment	FALSE	canonical	3	324	junction_6	80.7416110579464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTCTTGTTGACACTT	NA	False	NA	6	True	AATAAA	-10	NA	54600233	54623925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
Isoform_48081_65	chr3	+	2863	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	14	-126	-2	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600241	54636183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48082_13	chr3	+	2826	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	119.269081933775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48083_13	chr3	+	2828	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	120.844519648158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600244	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48084_54	chr3	+	3101	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48085_13	chr3	+	3065	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_23	121.920310572839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600241	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48090_6	chr3	+	2852	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	134.487197208574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48091_6	chr3	+	3088	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	136.806800239301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600278	54636183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48092_11	chr3	+	2849	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	125.83210025912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48094_7	chr3	+	3086	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	128.35619817316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48095_15	chr3	+	2865	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	125.987554565225	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48096_6	chr3	+	2829	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	147.45030252928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48098_16	chr3	+	3101	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	128.485425001709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600278	54636183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_481_597	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
Isoform_48100_36	chr3	+	2862	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	116.599933013266	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48103_22	chr3	+	3099	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	119.346079476414	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48104_7	chr3	+	3063	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	142.137304440493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_48114_7	chr3	+	1090	10	FSM	ENSMUSG00000036632.10	ENSMUST00000141191.8	2972	10	0	1882	0	-359	multi-exon	FALSE	canonical	3	42	junction_2	150.752270011367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54642979	54656857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48115_4	chr3	+	1471	10	FSM	ENSMUSG00000036632.10	ENSMUST00000141191.8	2972	10	-25	1526	-5	-3	multi-exon	FALSE	canonical	3	42	junction_2	150.752270011367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642954	54657213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48116_79	chr3	+	1448	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	3	0	-3	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642979	54657213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48117_112	chr3	+	1093	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	358	0	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642979	54656858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48118_9	chr3	+	1532	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-64	3	-64	-3	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAAGGTGTCCTCTTCC	NA	False	NA	15	True	AATAAA	-19	NA	54642895	54657213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48119_11	chr3	+	1152	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-39	358	-39	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642920	54656858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
Isoform_48120_52	chr3	+	3788	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	-18	0	-18	0	multi-exon	TRUE	canonical	0	0	junction_4	65.469339197826	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	21	True	AATAAA	-22	NA	55019510	55044743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_48125_6	chr3	+	3607	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-31	-9	-10	-2	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGATGTATTCACTGG	NA	False	NA	19	True	AATAAA	-20	NA	55019518	55044741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_48127_3	chr3	+	3854	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.9825598273974	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTCAGATGTATTCAC	NA	False	NA	16	True	AATAAA	-17	NA	55019528	55044738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_48128_4	chr3	+	4034	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-61	8	-3	-2	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGCTGGGCCTCAGAT	NA	False	NA	8	True	AATAAA	-9	NA	55019525	55044730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_48129_6	chr3	+	2670	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-50	1361	3	-1355	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATGTCAACCTATTTT	NA	False	NA	14	True	AATAAA	-25	NA	55019536	55043377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
Isoform_4813_14	chr11	-	1088	6	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	31	6417	5	-29	5prime_fragment	FALSE	canonical	3	969	junction_1	28.6872794109166	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGGTCTTATTTCTT	4520	False	NA	NA	False	NA	NA	NA	6217741	6215335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
Isoform_48131_482	chr3	+	2332	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	24	8	24	-8	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAATAGTGTGCAAGG	NA	False	NA	12	True	AATAAA	-14	NA	55089472	55117370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
Isoform_48133_30	chr3	+	2478	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	-118	4	-118	-4	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGTGTGCAAGGAATC	NA	False	NA	16	True	AATAAA	-18	NA	55089330	55117374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
Isoform_48135_4	chr3	+	1103	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	-45	4	0	-4	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAGTCTCTTCATACAA	NA	False	NA	NA	False	AATAAA	-19	NA	57643495	57740649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
Isoform_48136_62	chr3	+	2257	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	21	400	1	-288	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATTGTTCTGGTGAA	NA	False	NA	22	True	AATAAA	-22	NA	57643503	57742252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_48137_17	chr3	+	2656	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	20	2	0	-2	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTTTGTTGAGTT	NA	False	NA	NA	False	AAGAAA	-40	NA	57643502	57742650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_48138_9	chr3	+	2230	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	3	-285	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTGTTCTGGTGAACTC	NA	False	NA	25	True	AATAAA	-25	NA	57643543	57742255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_48139_5	chr3	+	2244	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-14	-295	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCAAGTATTGTTC	NA	False	NA	15	True	AATAAA	-15	NA	57643519	57742245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_4814_5	chr11	-	1978	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	17	8	12	-8	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGAACTAAATTCTCCC	5355	False	NA	NA	False	ATTAAA	-16	NA	6224853	6220376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
Isoform_48140_3	chr3	+	2802	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGATTGTTTCTTTGTT	NA	False	NA	NA	False	AAGAAA	-35	NA	57643495	57742645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_48141_6	chr3	+	2408	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-289	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643495	57742251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
Isoform_48143_7	chr3	+	4734	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	0	5065	0	-2	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGCTCTATATGTG	NA	False	NA	16	True	ATTAAA	-16	NA	58322135	58369139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
Isoform_48144_21	chr3	+	4662	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-5	2	0	-2	multi-exon	FALSE	canonical	3	95	junction_1	10.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGCTCTATATGTG	NA	False	NA	16	True	ATTAAA	-16	NA	58322135	58369139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58325035_58366751_58366804_58367428
Isoform_48152_64	chr3	+	2291	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	7	1	7	-1	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCCTTCAAGTTTGT	NA	False	NA	4	True	AATAAA	-15	NA	58433248	58464921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_48153_135	chr3	+	2151	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	148	0	-73	0	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433389	58464922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_48155_150	chr3	+	2077	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	222	0	0	0	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_48161_6	chr3	+	1959	13	FSM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	-14	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	220.750408958977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433462	58464922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
Isoform_48163_23	chr3	+	3094	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	59	4	-3	-4	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACCCTGCTTTGTGAA	NA	False	NA	11	True	AATAAA	-14	NA	58484115	58500550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
Isoform_48166_4	chr3	+	1152	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	31	1974	31	-1974	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGCAGATTGTGAAC	NA	False	NA	NA	False	AATACA	-10	NA	58484087	58498580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
Isoform_48169_5	chr3	+	4952	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	595	91	-60	-91	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCTGGTGTAATTT	NA	False	NA	NA	False	TATAAA	-15	NA	62246359	62369551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
Isoform_4817_1206	chr11	-	672	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	49	912	-42	-3	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394394	6378140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_48171_6	chr3	+	3217	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTGAATATTGAAGTTA	NA	False	NA	6	True	AATAAA	-16	NA	63202847	63288518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48173_3	chr3	+	3537	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-18	-203	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGGCCTGTGTGCACG	NA	False	NA	7	True	AATAAA	-18	NA	63202850	63288841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48174_5	chr3	+	3483	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	35	-204	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTAGGCCTGTGTGCAC	NA	False	NA	6	True	AATAAA	-17	NA	63202903	63288840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48176_7	chr3	+	5722	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-24	2089	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTGCTTTGCATT	NA	False	NA	18	True	NA	NA	NA	63202957	63291133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48178_6	chr3	+	3144	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	112	526	112	1	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTGAATATTGAAGTTA	NA	False	NA	6	True	AATAAA	-16	NA	63203627	63288518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48179_3	chr3	+	5768	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	101	-2087	101	2087	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTTGTGCTTTGCA	NA	False	NA	16	True	NA	NA	NA	63203616	63291131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_4818_39	chr11	-	731	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	-10	912	-10	-3	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394453	6378140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_48180_4	chr3	+	3491	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	91	200	91	-200	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTGTGTGCACGCCA	NA	False	NA	10	True	AATAAA	-21	NA	63203606	63288844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
Isoform_48186_243	chr3	+	2268	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	10	5827	10	-5827	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTAACTGAGGCTC	NA	False	NA	15	True	AATAAA	-15	NA	63883536	63924173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_48187_642	chr3	+	2222	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	56	5827	56	-5827	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTAACTGAGGCTC	NA	False	NA	15	True	AATAAA	-15	NA	63883582	63924173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
Isoform_48193_5	chr3	+	2052	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	5	22461	5	-14540	5prime_fragment	FALSE	canonical	3	135	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65435835	65440478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_65436054_65438644
Isoform_48197_8	chr3	+	3819	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	-6	378	-6	-378	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTCTGTTTTGTTCTA	NA	False	NA	16	True	NA	NA	NA	65435824	65462561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
Isoform_4820_28	chr11	-	1602	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	29	2	29	-2	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATGTGTCCTGGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	6394414	6377230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
Isoform_48201_12	chr3	+	3780	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	33	378	-17	-378	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTCTGTTTTGTTCTA	NA	False	NA	16	True	NA	NA	NA	65435863	65462561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
Isoform_48204_21	chr3	+	3205	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	15	4	2	1	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACACTGTGACTGCTTC	NA	False	NA	11	True	AATAAA	-11	NA	66893019	67265724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
Isoform_48209_4	chr3	+	1629	5	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	154.5202252134	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGACTCTGATCTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	66893020	66992569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_66991555
Isoform_48210_3	chr3	+	3388	5	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	8	18497	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	153.669287757834	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGGACTCGCTGATCC	NA	False	NA	NA	False	NA	NA	NA	66893025	67011057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67008279
Isoform_48211_15	chr3	+	1087	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	28	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTGGTTAAATTGGTC	NA	False	NA	2	True	AATAAA	-15	NA	67281457	67307332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
Isoform_48212_375	chr3	+	2582	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	35	1461	15	264	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	NA	False	NA	NA	False	AGTAAA	-31	NA	67337463	67382401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
Isoform_48215_14	chr3	+	4037	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	41	0	21	0	multi-exon	FALSE	canonical	0	0	junction_6	154.691388272057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337469	67383862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
Isoform_48217_197	chr3	+	2961	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	47	3	47	-3	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTTGGAGGATAAATGAC	NA	False	NA	16	True	AATAAA	-17	NA	67490120	67511567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
Isoform_48222_31	chr3	+	2039	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	-2	22	-2	-4	multi-exon	FALSE	canonical	3	12	junction_1	163.233149894529	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATACGTCCTTTTGCTC	NA	False	NA	17	True	AATAAA	-19	NA	68375513	68533792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_48224_21	chr3	+	2301	8	NIC	ENSMUSG00000027777.16	novel	1298	6	NA	NA	-194	-2	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	160.899004956272	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	19	True	AATAAA	-21	NA	68400629	68533794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_68400939_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_48225_464	chr3	+	2121	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	36	-1	36	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68401576	68533797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_48226_192	chr3	+	2149	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	8	-1	8	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68401548	68533797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_48228_36	chr3	+	2307	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	26074	22	49	-4	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATACGTCCTTTTGCTC	NA	False	NA	17	True	AATAAA	-19	NA	68401589	68533792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_4823_53	chr11	-	594	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-78	3	13	-3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGTGTCTCAGTAT	NA	False	NA	-6	True	GATAAA	-13	NA	6394430	6378140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
Isoform_48234_26	chr3	+	1573	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	154	3	154	-2	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	19	True	AATAAA	-21	NA	68479731	68533794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
Isoform_48247_6	chr3	+	4061	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	252	3	-1	2	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAAGTTTCCTGTTT	NA	False	NA	17	True	TATAAA	-18	NA	68912322	68941953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
Isoform_48252_36	chr3	+	4029	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-26	5414	-26	2289	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAGGAAAAAAAAAAGAAT	1748	False	NA	NA	False	NA	NA	NA	69224167	69462721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_48253_6	chr3	+	3894	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-112	5635	-112	2068	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAATGTTTGGGTGAA	1662	False	NA	-2	True	AATAAA	-10	NA	69224081	69462500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_48254_4	chr3	+	4122	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-119	5414	-119	2289	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAGGAAAAAAAAAAGAAT	1655	False	NA	NA	False	NA	NA	NA	69224074	69462721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
Isoform_48258_104	chr3	+	1762	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	45	7328	-2	3	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTGTGAAGGTTTCAT	NA	False	NA	14	True	AATAAA	-24	NA	69629362	69656378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
Isoform_48259_227	chr3	+	1726	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	79	7330	-19	1	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTGTGAAGGTTTC	NA	False	NA	12	True	AATAAA	-22	NA	69629396	69656376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
Isoform_4826_5	chr11	-	3307	22	FSM	ENSMUSG00000020437.13	ENSMUST00000003459.4	3307	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_15	5.11677690501468	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGCCACTGCTTTG	5089	False	NA	0	True	AATAAA	-20	NA	6470958	6456547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6460372_6460867_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6466865_6467086_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978_6469188_6470741
Isoform_48263_385	chr3	+	1707	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	42	3	42	-3	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	False	NA	26	True	AATAAA	-16	NA	79498713	79510954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_48264_32	chr3	+	1860	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	52	-160	52	160	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTTATTTATGACAA	NA	False	NA	NA	False	AATAAA	-21	NA	79498723	79511117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_48265_585	chr3	+	1369	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	14	369	14	5	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTTTAAAATGTTTG	NA	False	NA	21	True	AATAAA	-20	NA	79498685	79510588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_48267_14	chr3	+	3738	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	35	4	12	-4	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGAATCTCATTTTA	NA	False	NA	12	True	AATAAA	-11	NA	79498683	79510579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
Isoform_48272_49	chr3	+	1962	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	6	2	6	-2	multi-exon	FALSE	canonical	3	150	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCGTTTCTTTAGACT	4375	False	NA	NA	False	AATAAA	-12	NA	79536391	79540125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79536664_79538435
Isoform_48274_7	chr3	+	3847	5	FSM	ENSMUSG00000027955.17	ENSMUST00000118853.8	6729	5	-16	2898	-16	-2896	multi-exon	FALSE	canonical	0	0	junction_1	2.77263412660235	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCTCATCTCCTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	79791823	79850689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_79791998_79793294_79794438_79815895_79816111_79843901_79844129_79848601
Isoform_48275_6	chr3	+	2822	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	0	-4	0	-2	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCGTCTAAGTGTAT	NA	False	NA	44	True	AATAAA	-29	NA	80944478	81121345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_48276_24	chr3	+	2906	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	603	12	-153	-6	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGTGTAAGTGTTCGT	NA	False	NA	34	True	AATAAA	-19	NA	80944325	81121335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
Isoform_4828_14	chr11	-	771	3	FSM	ENSMUSG00000085156.9	ENSMUST00000124818.3	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478766	6475590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6475818_6476354_6476438_6478305
Isoform_48280_332	chr3	+	1765	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	23	63	-10	3	multi-exon	FALSE	canonical	3	670	junction_6	49.0312790627637	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	27	True	AATAAA	-19	NA	82962851	82979599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
Isoform_48281_37	chr3	+	1860	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	-20	11	-20	-11	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAAGAATTCAGGCAT	NA	False	NA	-4	True	AATAAA	-29	NA	82962808	82979651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
Isoform_48282_27	chr3	+	2012	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	-12	3	-12	-3	multi-exon	FALSE	canonical	3	19	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCTTCTGTCATG	NA	False	NA	18	True	TATAAA	-21	NA	83673615	83681620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_83674351_83676632_83676714_83680424
Isoform_48286_26	chr3	+	3558	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-676	1591	-676	-38	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	AATATA	-24	NA	84721898	84884914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_4829_115	chr11	-	584	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	27	0	11	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478752	6475590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
Isoform_48290_28	chr3	+	3494	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-676	-38	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	AATATA	-24	NA	84721898	84884914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_48291_6	chr3	+	1958	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	225	38	225	-38	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	854	False	NA	NA	False	AATATA	-24	NA	84859677	84884914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_48292_3	chr3	+	2058	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	125	38	125	-38	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	754	False	NA	NA	False	AATATA	-24	NA	84859577	84884914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
Isoform_48293_9	chr3	+	2317	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	-17	1169	-17	295	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAACTTCCACGTAAG	NA	False	NA	NA	False	AATAAA	-23	NA	85481408	85561760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
Isoform_48294_101	chr3	+	2003	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	8	1458	0	6	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCGTGGGTGCTTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	85481433	85561471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
Isoform_48296_16	chr3	+	1261	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	17	249	17	-2	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTATGTGCGGAG	NA	False	NA	NA	False	ATTAAA	-15	NA	86893874	86896838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
Isoform_48297_8	chr3	+	1543	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-15	-1	-15	1	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATTGTTTTATTAA	NA	False	NA	3	True	AATAAA	-15	NA	86893842	86897088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
Isoform_48298_3	chr3	+	2271	4	NIC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	18	junction_1	21.9291789378647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATTGTTTTATTAA	NA	False	NA	3	True	AATAAA	-15	NA	86893852	86897088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_86894013_86894294_86895863_86896457_86896555_86896642
Isoform_48299_3	chr3	+	5108	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	20	-1	-9	1	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAGAGTACTTAAAT	NA	False	NA	NA	False	ATTAAA	-11	NA	87432904	87447450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
Isoform_48301_4	chr3	+	5108	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	188	13	-12	1	multi-exon	FALSE	canonical	3	12	junction_1	13.4605906259718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAGAGTACTTAAAT	NA	False	NA	NA	False	ATTAAA	-11	NA	87432901	87447450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
Isoform_48307_130	chr3	+	2186	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	59	0	59	0	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813686	87823439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
Isoform_4831_31	chr11	-	621	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478789	6475590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
Isoform_48310_54	chr3	+	2245	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-2	2	-2	-2	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACTAATTCTTTTC	NA	False	NA	23	True	AATAAA	-19	NA	87813625	87823437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
Isoform_48319_48	chr3	+	902	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-25	238	2	-228	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826844	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48320_11	chr3	+	1133	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-25	7	2	3	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87826844	87830972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48322_23	chr3	+	977	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	7	-228	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826849	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48323_8	chr3	+	1019	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	9	-214	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826821	87830755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48324_116	chr3	+	951	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	37	238	7	-228	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826849	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48326_14	chr3	+	1000	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	-12	238	-12	-228	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826800	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48327_14	chr3	+	1180	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	38	8	8	2	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826850	87830971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48329_204	chr3	+	919	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	192	228	135	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87827004	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_4833_3	chr11	-	2449	3	NIC	ENSMUSG00000085156.9	novel	611	4	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	436	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGAGACTCCAGC	NA	False	NA	-19	True	NA	NA	NA	6478767	6475608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6475818_6476354_6478375_6478547
Isoform_48330_109	chr3	+	1073	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	38	228	8	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826850	87830741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48331_12	chr3	+	1304	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	38	-3	8	3	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTCTTAAAAGCTT	NA	False	NA	19	True	AATAAA	-21	NA	87826850	87830972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48332_27	chr3	+	1144	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	197	-2	140	2	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87827009	87830971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
Isoform_48337_432	chr3	+	2901	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-7	-1	-7	1	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837613	87847994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
Isoform_48339_81	chr3	+	2990	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-97	0	-97	0	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837523	87847993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
Isoform_4834_4	chr11	-	552	2	FSM	ENSMUSG00000085156.9	ENSMUST00000134527.3	1540	2	9	979	9	-979	multi-exon	FALSE	canonical	3	436	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACCTGCCACGTGGAT	NA	False	NA	-3	True	NA	NA	NA	6478754	6478029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6478375_6478547
Isoform_48343_13	chr3	+	3202	4	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	165.235858362793	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837613	87847994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_87837919_87838336_87839583_87845880_87846082_87846544
Isoform_48344_13	chr3	+	3110	5	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	172.954293095026	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	False	NA	32	True	NA	NA	NA	87837613	87847994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_87837919_87838336_87838546_87838637_87839583_87845880_87846082_87846544
Isoform_48348_12	chr3	+	896	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	30	5	30	-5	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATCCTTCTGTGGCTCC	8861	False	NA	3	True	ATTAAA	-14	NA	87856002	87860678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
Isoform_48349_4	chr3	+	1771	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	67	4288	31	2772	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAAACAAACACC	NA	False	NA	NA	False	AGTAAA	-8	NA	87878466	87883470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
Isoform_48355_19	chr3	+	1630	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	1	-1	0	1	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTGTTTTGTTTTT	1720	False	NA	37	True	TTTAAA	-26	NA	87950415	87963298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
Isoform_48357_44	chr3	+	5682	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	73	1	16	-1	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGCGTTGTTGCTATA	NA	False	NA	18	True	AATAAA	-19	NA	87989350	88028354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
Isoform_4836_121	chr11	-	2323	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	1	0	1	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576042	6565597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_48363_4280	chr3	+	1906	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	71	0	-1	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	4280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3875	False	NA	23	True	ATTAAA	-15	NA	88204493	88229074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
Isoform_48365_67	chr3	+	1995	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	-18	0	-18	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3786	False	NA	23	True	ATTAAA	-15	NA	88204404	88229074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
Isoform_48366_105	chr3	+	1876	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	23	78	13	-75	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACTGACACGTATCT	3827	False	NA	-55	True	NA	NA	NA	88204445	88228996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
Isoform_4838_22	chr11	-	2401	13	NIC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	184.937433113652	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576042	6565597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_48387_473	chr3	+	1556	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	23	2640	-9	92	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATTTGTGAGTCTTT	4018	False	NA	9	True	TTTAAA	-19	NA	88232352	88235980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
Isoform_48388_684	chr3	+	1511	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	23	2685	-9	47	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCCAGTCTCTCTTAT	4018	False	NA	13	True	AATAGA	-16	NA	88232352	88235935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
Isoform_484_466	SIRV6	+	453	5	FSM	SIRV6A	SIRV614	459	5	0	6	0	-6	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGAAAGTAAGACTGTA	NA	False	NA	NA	False	AAAAAG	-11	NA	2516	10809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
Isoform_48400_7	chr3	+	4389	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	77.214898753862	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88243581	88269643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_88243805_88249164_88249264_88249747_88249830_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_48401_21	chr3	+	1133	5	ISM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-14	6815	-14	-1682	5prime_fragment	FALSE	canonical	3	289	junction_3	7.49583217528247	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88243603	88253221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669
Isoform_48402_5	chr3	+	3128	12	NIC	ENSMUSG00000001415.11	novel	3119	12	NA	NA	-14	-36	intron_retention	FALSE	canonical	3	5	junction_7	82.5272306675372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88243603	88260000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285
Isoform_48403_13	chr3	+	4442	22	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	5	junction_7	79.1884860729804	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_48405_24	chr3	+	3097	12	FSM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-14	36	-14	-36	multi-exon	FALSE	canonical	3	253	junction_5	17.1507655902172	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88243603	88260000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285
Isoform_48407_355	chr3	+	4411	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	37	0	-14	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
Isoform_4841_35	chr11	-	2623	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	231	4	combination_of_known_junctions	FALSE	canonical	3	75	junction_11	140.71599672936	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6575791	6566418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575383
Isoform_48414_1132	chr3	+	3322	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	6	2	0	-2	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6111	False	NA	NA	False	AATAAA	-24	NA	88461070	88477030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_48415_35	chr3	+	3381	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-51	0	-51	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6054	False	NA	NA	False	AATAAA	-26	NA	88461013	88477032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_48417_15	chr3	+	4366	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_48419_14	chr3	+	3180	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	451.412707063908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6096	False	NA	NA	False	AATAAA	-26	NA	88461055	88477032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_48420_13	chr3	+	3258	11	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	406.990417577613	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6111	False	NA	NA	False	AATAAA	-24	NA	88461070	88477030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
Isoform_48425_36	chr3	+	1386	9	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	123	junction_2	2287.5892571384	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	NA	False	NA	16	True	AATAAA	-18	NA	88483231	88495727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_48435_2210	chr3	+	1023	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	33	3	0	-3	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	2210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3590	False	NA	12	True	AATAAA	-14	NA	88486947	88495723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_48438_70	chr3	+	1170	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	18	1	18	-1	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3638	False	NA	14	True	AATAAA	-16	NA	88486995	88495725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
Isoform_48446_12	chr3	+	4273	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	59	1	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8677	False	NA	14	True	ATTAAA	-16	NA	88522732	88555358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48447_14	chr3	+	3127	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	84	1	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGCTGATTGTCCTT	8702	False	NA	10	True	AGTAAA	-16	NA	88522757	88554237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_4845_545	chr11	-	2293	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1	-4	1	4	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6576042	6566418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_48452_10	chr3	+	3309	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	55	602	55	1	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGCTGATTGTCCTT	9449	False	NA	10	True	AGTAAA	-16	NA	88523504	88554237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48454_28	chr3	+	3287	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	84	1121	84	2	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	9478	False	NA	11	True	AGTAAA	-17	NA	88523533	88554238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48455_17	chr3	+	4416	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	74	2	74	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	9468	False	NA	13	True	ATTAAA	-15	NA	88523523	88555357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48458_9	chr3	+	4289	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	NA	False	NA	11	True	ATTAAA	-13	NA	88528413	88555355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_4846_59	chr11	-	3111	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	4	-825	4	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576039	6565597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_48460_17	chr3	+	3119	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	21	1	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGCTGATTGTCCTT	NA	False	NA	10	True	AGTAAA	-16	NA	88528465	88554237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48464_26	chr3	+	3161	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	17	1122	-2	1	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGCTGATTGTCCTT	NA	False	NA	10	True	AGTAAA	-16	NA	88528429	88554237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48465_14	chr3	+	4296	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	3	1	3	1	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	NA	False	NA	14	True	ATTAAA	-16	NA	88528415	88555358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48466_26	chr3	+	4252	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	47	1	15	1	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	NA	False	NA	14	True	ATTAAA	-16	NA	88528459	88555358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48469_41	chr3	+	3131	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	48	1121	16	2	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	NA	False	NA	11	True	AGTAAA	-17	NA	88528460	88554238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48471_5	chr3	+	4230	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	158	2	-10	0	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	NA	False	NA	11	True	ATTAAA	-13	NA	88528756	88555355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_48474_6	chr3	+	3800	8	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-25	-94	5	94	intron_retention	FALSE	canonical	3	344	junction_7	31.8452892745472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAATTAAAAAATTAAA	13	False	NA	NA	False	NA	NA	NA	88593114	88609014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155
Isoform_48475_10	chr3	+	2751	9	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-14	-97	5	97	intron_retention	FALSE	canonical	3	344	junction_7	29.8158410077596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAATTAAAAAA	-5	True	NA	NA	False	NA	NA	NA	88593125	88609017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257
Isoform_48477_10	chr3	+	2495	10	FSM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-10	-97	-4	97	multi-exon	FALSE	canonical	3	344	junction_7	30.6195289897731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAATTAAAAAA	-1	True	NA	NA	False	NA	NA	NA	88593129	88609017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567
Isoform_48478_3	chr3	+	3669	13	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	12	77	1	-7	intron_retention	FALSE	canonical	3	322	junction_11	32.668367302671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCTTGTCATTTC	-9	True	NA	6	True	AATAAA	-7	NA	88593121	88620154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067
Isoform_48479_127	chr3	+	2898	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	13	70	2	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-8	True	NA	13	True	AATAAA	-14	NA	88593122	88620161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
Isoform_48480_88	chr3	+	2974	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	13	-6	2	6	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCATTGTTGTTTTT	-8	True	NA	22	True	AATAAA	-22	NA	88593122	88620237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
Isoform_48481_4	chr3	+	2463	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	-11	529	-11	-167	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGTTATTTTTGCAT	-3	True	NA	NA	False	AATACA	-19	NA	88593098	88619702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
Isoform_48483_5	chr3	+	3641	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	-7	2	6	-2	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCATTTCTCTTT	-4	True	NA	11	True	AATAAA	-12	NA	88593126	88620159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
Isoform_48485_6	chr3	+	2869	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	-11	-291	2	-1	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGTCATTTCTCTTTT	-8	True	NA	12	True	AATAAA	-13	NA	88593122	88620160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_48486_5	chr3	+	2769	14	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	117.891435365528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-8	True	NA	13	True	AATAAA	-14	NA	88593122	88620161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
Isoform_48487_8	chr3	+	2493	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	26	-1315	-12	1	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGTGTCAGATTTTTT	2243	False	NA	NA	False	AATACA	-10	NA	88624170	88638349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_48488_25	chr3	+	1104	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	38	62	0	-62	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTACCGTGTGCA	2255	False	NA	12	True	NA	NA	NA	88624182	88636972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
Isoform_48489_7	chr3	+	777	3	FSM	ENSMUSG00000054199.19	ENSMUST00020183812.1	621	3	8	-164	5	164	multi-exon	FALSE	canonical	3	143	junction_1	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTTTTTCTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	88742542	88753886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_88742597_88744296_88744828_88753694
Isoform_48490_3	chr3	+	1285	3	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	48424	-744	48424	744	3prime_fragment	FALSE	canonical	3	272	junction_2	41	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATACCTACTTTT	NA	False	NA	NA	False	NA	NA	NA	88730946	88733638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88731105_88731656_88731842_88732696
Isoform_48491_3	chr3	+	770	4	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	14	8211	combination_of_known_junctions	FALSE	canonical	3	78	junction_3	45.1540572804802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAAAAACTAAAA	NA	False	NA	NA	False	AAGAAA	-5	NA	88742574	88761933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908
Isoform_48492_3	chr3	+	2510	9	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	64698	3	9494	-3	3prime_fragment	FALSE	canonical	3	105	junction_2	17.2730823827133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCAAGTGTTCGTTTT	NA	False	NA	8	True	AGTAAA	-12	NA	88807235	88817403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
Isoform_48493_7	chr3	+	1843	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-25	952	-2	-2	5prime_fragment	FALSE	canonical	3	250	junction_3	91.6433979984058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072121	89083276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_48494_5	chr3	+	2802	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-35	3	10	-1	intron_retention	FALSE	canonical	3	250	junction_3	91.6433979984058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072111	89084225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_48495_93	chr3	+	2143	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-25	-6	-2	6	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCCCTGGAATTTGAGG	NA	False	NA	24	True	AATAAA	-25	NA	89072121	89084234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48496_3	chr3	+	2324	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-39	-173	6	173	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTGATCTAGAGTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	89072107	89084401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48497_4	chr3	+	2369	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-16	-241	5	241	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCTTGAAGTTATGCCC	NA	False	NA	NA	False	AATAAA	-13	NA	89072130	89084469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48499_3	chr3	+	2476	12	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	250	junction_3	93.3379180298595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072125	89084225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_485_580	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	3352.72986617705	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
Isoform_4850_32	chr11	-	2265	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	154.867151813236	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576073	6566419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
Isoform_48500_7	chr3	+	1839	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	20	953	-2	-3	5prime_fragment	FALSE	canonical	3	173	junction_3	109.540211115552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACTTTACACTTTAATG	NA	False	NA	2	True	AATAAA	-16	NA	89072121	89083275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_48501_71	chr3	+	2146	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	8	0	8	0	multi-exon	FALSE	canonical	3	173	junction_3	106.020045274467	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072109	89084228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48505_7	chr3	+	2906	20	Fusion	ENSMUSG00000028049.16_ENSMUSG00000068917.13	novel	2154	13	NA	NA	-1	-1	multi-exon	FALSE	canonical	3	36	junction_12	335.943266216698	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072122	89090069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48506_3	chr3	+	2480	12	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	173	junction_3	110.709134206235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48507_18	chr3	+	2058	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	-176	3	8	-1	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072109	89084225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48508_3	chr3	+	2824	12	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	370	junction_2	63.7556025734534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072125	89084228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89072414_89074341_89074512_89076001_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48509_5	chr3	+	2874	10	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-4	956	-2	-8	5prime_fragment	FALSE	canonical	3	370	junction_2	63.4017174670985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTACACTTTACACTT	NA	False	NA	-3	True	AATAAA	-11	NA	89072121	89083270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
Isoform_4851_23	chr11	-	2583	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	210	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	157.931567982115	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6575812	6566418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575444
Isoform_48510_16	chr3	+	3193	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-14	-11	10	9	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGGAATTTGAGGTTC	NA	False	NA	27	True	AATAAA	-28	NA	89072111	89084237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48511_10	chr3	+	2141	13	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	115	junction_2	130.727664333997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCCTGGAATTTGAGGT	NA	False	NA	25	True	AATAAA	-26	NA	89072121	89084235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89072414_89074341_89074512_89076004_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48512_11	chr3	+	2131	13	FSM	ENSMUSG00000068917.13	ENSMUST00000090927.12	2128	13	-3	0	-2	0	multi-exon	FALSE	canonical	3	115	junction_2	141.611043001596	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89072414_89074341_89074512_89076004_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
Isoform_48513_152	chr3	+	1459	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	15	1	9	1	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084811	89090071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48514_65	chr3	+	1482	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	-8	1	-8	1	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084788	89090071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48516_359	chr3	+	1456	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	32	1	9	1	multi-exon	FALSE	canonical	3	743	junction_2	141.598022585063	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084811	89090071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48517_14	chr3	+	1510	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	-22	1	-22	1	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084757	89090071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48518_9	chr3	+	2273	8	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	9	2	intron_retention	FALSE	canonical	3	743	junction_2	151.227764430656	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTTCCTGTATCTTT	NA	False	NA	20	True	ATTAAA	-24	NA	89084811	89090074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48519_8	chr3	+	1536	9	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	368.976773489877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCCTGTATCTTTACT	NA	False	NA	23	True	ATTAAA	-27	NA	89084791	89090077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_89084965_89085296_89085375_89086347_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
Isoform_48521_5	chr3	+	3114	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	-33	2	27	0	multi-exon	FALSE	canonical	3	16	junction_5	4.5924839782964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1690	False	NA	7	True	AATAAA	-18	NA	89090476	89096596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
Isoform_48522_4	chr3	+	3105	12	NIC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	7.00649049745371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1696	False	NA	7	True	AATAAA	-18	NA	89090482	89096596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
Isoform_48523_5	chr3	+	1958	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-18	-2	-6	2	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCTATCTGTGACTA	NA	False	NA	5	True	ATTAAA	-15	NA	89110228	89115990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_48524_29	chr3	+	1792	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	-13	0	11	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGACTAAAGGAGGCA	NA	False	NA	14	True	ATTAAA	-24	NA	89110234	89115999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
Isoform_48525_4	chr3	+	3147	23	FSM	ENSMUSG00000028047.12	ENSMUST00000029682.11	3190	23	42	1	-5	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.85061976732276	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGCAATTGTTTATT	5819	False	NA	4	True	CATAAA	-18	NA	89122528	89134143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89122632_89123987_89124195_89124991_89125249_89125334_89125438_89126163_89126191_89126353_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
Isoform_48526_552	chr3	+	513	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	476	183	8	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7599	False	NA	21	True	AATAAA	-15	NA	89153748	89157030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_48527_175	chr3	+	535	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	454	183	-14	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7577	False	NA	21	True	AATAAA	-15	NA	89153726	89157030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_48528_26	chr3	+	514	5	NIC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	88	junction_1	756.677730278882	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7595	False	NA	21	True	AATAAA	-15	NA	89153744	89157030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89153823_89154087_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_48529_48	chr3	+	566	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	33	1	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	697.396945791993	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7624	False	NA	21	True	AATAAA	-15	NA	89153773	89157030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89153901_89154084_89154240_89154371_89154436_89156380_89156448_89156877
Isoform_4853_53	chr11	-	2369	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTATCTTCCCAGGCTCT	NA	False	NA	-25	True	AATAAA	-21	NA	6576042	6566420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
Isoform_48533_262	chr3	+	381	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	24	-1	24	1	multi-exon	FALSE	canonical	3	539	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTGTAGTTTTGAGTA	6801	False	NA	18	True	ATTAAA	-19	NA	89173882	89174385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89173914_89174035
Isoform_48534_3	chr3	+	867	6	ISM	ENSMUSG00000109293.2	ENSMUST00000208216.2	2285	16	8673	-85	8673	85	3prime_fragment	FALSE	canonical	2	5	junction_5	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACACAAATATGAATCTTA	6047	False	NA	NA	False	AATAAA	-13	NA	89277954	89284941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280731_89280888_89284736
Isoform_48535_237	chr3	+	3140	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	0	14	0	-2	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCGGCCTCTCAACTCC	NA	False	NA	18	True	ATTAAA	-15	NA	89325857	89337320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48536_16	chr3	+	3228	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	35	-13	35	1	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTCTGGAAAGTCTGAT	NA	False	NA	33	True	ATTAAA	-30	NA	89325784	89337335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48537_296	chr3	+	3110	13	FSM	ENSMUSG00000042626.14	ENSMUST00000107417.9	3079	13	-33	2	10	-2	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCGGCCTCTCAACTCC	NA	False	NA	18	True	ATTAAA	-15	NA	89325887	89337320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48541_16	chr3	+	3338	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	-75	-13	-75	1	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTCTGGAAAGTCTGAT	NA	False	NA	33	True	ATTAAA	-30	NA	89325674	89337335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48547_65	chr3	+	2990	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325841	89337322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48548_81	chr3	+	2944	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325887	89337322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48552_64	chr3	+	3104	13	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	152.973558898988	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89328934	89337322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89329056_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48553_431	chr3	+	3533	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	0	-916	0	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89328934	89337322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
Isoform_48572_31	chr3	+	3026	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	173	-1	10	1	multi-exon	FALSE	canonical	3	239	junction_1	12.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGACTCCTTTGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	89337740	89342436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89338037_89338433_89338484_89339756
Isoform_48573_28	chr3	+	2494	11	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-2006	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	22.5690052948729	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4368	False	NA	NA	False	NA	NA	NA	89344012	89356253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
Isoform_48574_130	chr3	+	2469	11	FSM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	5	2005	-1	-2005	multi-exon	FALSE	canonical	3	58	junction_1	11.4367827643966	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	4373	False	NA	NA	False	NA	NA	NA	89344017	89356254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
Isoform_48575_12	chr3	+	2593	11	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	5	-2005	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.7984495658169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	4423	False	NA	NA	False	NA	NA	NA	89344067	89356254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
Isoform_48581_102	chr3	+	1171	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	19	4	19	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	159	False	NA	17	True	AATAAA	-16	NA	89366443	89376316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
Isoform_48582_19	chr3	+	961	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	34	26515	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCTGTGGCTGTGT	174	False	NA	NA	False	NA	NA	NA	89366458	89402835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
Isoform_48583_5	chr3	+	1126	6	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	81	26522	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	269.5838274081	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGTTGTCTCT	221	False	NA	NA	False	NA	NA	NA	89366505	89402842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89398000_89398206_89402534
Isoform_48584_35	chr3	+	3763	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	31	3	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGCACAGACAGTT	NA	False	NA	23	True	ATTAAA	-23	NA	89622359	89658716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48585_9	chr3	+	5811	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89622345	89660750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48586_80	chr3	+	3843	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	31	2035	31	5	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCACAGACAGTTCT	NA	False	NA	25	True	ATTAAA	-25	NA	89622359	89658718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48588_18	chr3	+	5878	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	31	0	31	0	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622359	89660753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48590_6	chr3	+	2331	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	31	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.832043833782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGCACAGACAGTT	NA	False	NA	23	True	ATTAAA	-23	NA	89622359	89658716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_89622458_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48591_6	chr3	+	3815	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	18	2038	18	2	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATGTAGCACAGACAGT	NA	False	NA	22	True	ATTAAA	-22	NA	89638072	89658715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
Isoform_48594_9	chr3	+	3071	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	0	6	0	-6	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCATGGGTTCATGT	NA	False	NA	NA	False	AATAAA	-37	NA	89680922	89691301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_48595_15	chr3	+	1827	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-7	1257	-7	-1	multi-exon	TRUE	canonical	3	944	junction_1	76.7428968844819	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGGTCTTGACTCAT	NA	False	NA	22	True	AAAACA	-21	NA	89680915	89690050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
Isoform_48596_25	chr3	+	2530	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-147	3350	-147	-3350	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTGTGGTTTTTTT	2732	False	NA	NA	False	NA	NA	NA	89738529	89762791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
Isoform_48597_8	chr3	+	2675	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-173	3231	-173	-3231	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGATCCCATTGTAT	2706	False	NA	NA	False	NA	NA	NA	89738503	89762910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
Isoform_48599_3	chr3	+	1556	2	FSM	ENSMUSG00000027942.18	ENSMUST00000162595.2	453	2	-27	-1076	-2	1076	multi-exon	FALSE	canonical	3	516	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	89960133	89962077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89960427_89960814
Isoform_4860_211	chr11	-	2439	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-26	8	0	-8	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7163923	7156093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_48600_6	chr3	+	1093	6	FSM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	-22	9	1	-9	multi-exon	FALSE	canonical	3	422	junction_3	34.2496715312717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-7	NA	89960121	89966395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048
Isoform_48602_5	chr3	+	1433	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	-21	-1	7	1	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTGTTTGGGCTTTGT	NA	False	NA	NA	False	ATTAAA	-44	NA	89960127	89968302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
Isoform_48603_133	chr3	+	1601	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	7	902	7	-3	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGATCATTTCTTT	NA	False	NA	4	True	AATAAA	-14	NA	89960127	89969746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
Isoform_48604_4	chr3	+	1638	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	-89	-4	-89	4	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGCTGGCAGGATGG	NA	False	NA	11	True	AATAAA	-20	NA	89960121	89973183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
Isoform_48613_1239	chr3	+	2107	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	118	5	4	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACCGGCTTGACTT	NA	False	NA	13	True	AATAAA	-16	NA	89986964	90008203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
Isoform_48614_320	chr3	+	2200	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	30	0	30	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89986876	90008208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
Isoform_48628_3	chr3	+	993	8	FSM	ENSMUSG00000027935.15	ENSMUST00000107373.8	1415	8	5	417	5	-1	multi-exon	FALSE	canonical	2	6	junction_1	8.56666534317997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCCCATTTGCATTAC	NA	False	NA	5	True	ATTAAA	-17	NA	90121006	90133275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90121130_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
Isoform_48629_7	chr3	+	1009	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	102	-4	102	4	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATTTGCATTACTTTCA	NA	False	NA	10	True	ATTAAA	-22	NA	90128195	90133280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
Isoform_4863_38	chr11	-	2502	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-89	8	-63	-8	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCTTTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7163986	7156093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_48631_160	chr3	+	1096	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	5	0	5	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138908	90143145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
Isoform_48632_8	chr3	+	1291	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	5	-1	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGTGTAATCATTT	NA	False	NA	3	True	AATAAA	-13	NA	90138908	90143144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
Isoform_48634_6	chr3	+	1452	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	314	junction_2	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGTGTAATCATTT	NA	False	NA	3	True	AATAAA	-13	NA	90138901	90143144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_90139819_90141229_90141310_90142689
Isoform_48635_357	chr3	+	2333	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	31	0	31	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	-1	True	AATAAA	-16	NA	90155509	90160919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
Isoform_48639_3	chr3	+	5585	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	56	6	56	-6	multi-exon	TRUE	canonical	3	27	junction_1	11.4060845793856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTGCCTCCTGTTCTC	NA	False	NA	26	True	AGTAAA	-20	NA	90172547	90187970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
Isoform_4864_11	chr11	-	2561	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-151	11	-125	-11	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAAGCCCTTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	7164048	7156096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
Isoform_48644_353	chr3	+	2013	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	8	6	-2	-6	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACCAGTACAAGCATT	NA	False	NA	12	True	AATAAA	-17	NA	90383461	90395680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
Isoform_48647_102	chr3	+	1633	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	-19	413	2	3	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383434	90395273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
Isoform_48651_3	chr3	+	766	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-60	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	161.470327511486	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90421681	90431882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_90421773_90422067_90422327_90423156_90423350_90431659
Isoform_48652_32	chr3	+	506	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	495	6	495	-6	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90422236	90431882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_90422327_90423156_90423350_90431659
Isoform_48655_9	chr3	+	462	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	270	-1	-2	1	multi-exon	FALSE	canonical	3	31	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	5467	False	NA	23	True	AATAAA	-23	NA	90520458	90521722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_90520534_90521049_90521212_90521497
Isoform_48657_378	chr3	+	496	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	9	6	9	-6	multi-exon	FALSE	canonical	3	443	junction_1	9.5	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACACTGAGAGTCAG	NA	False	NA	1	True	AATAAA	-19	NA	93427803	93433588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_93427861_93431357_93431507_93433298
Isoform_48659_219	chr3	+	647	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	37	1	37	-1	multi-exon	FALSE	canonical	3	427	junction_2	41.5	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGACGTAGAGTGTTT	NA	False	NA	19	True	AATAAA	-23	NA	93462423	93471949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_93462519_93468250_93468403_93471549
Isoform_48660_14	chr3	+	711	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	-25	-1	-25	1	multi-exon	TRUE	canonical	3	427	junction_2	41.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACGTAGAGTGTTTCT	NA	False	NA	21	True	AATAAA	-25	NA	93462361	93471951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_93462519_93468250_93468403_93471549
Isoform_48664_8	chr3	+	1274	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-49	6	-5	-6	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATATTTTATGTGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	94320574	94333689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
Isoform_48665_3	chr3	+	2675	13	FSM	ENSMUSG00000041912.13	ENSMUST00000197901.5	2652	13	-29	6	-11	5	multi-exon	FALSE	canonical	1	1	junction_7	17.5283500522883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACACATACTCAGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	94320595	94338808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866
Isoform_48666_3	chr3	+	2537	14	FSM	ENSMUSG00000041912.13	ENSMUST00000166032.8	5692	14	-5	3160	-5	-1	multi-exon	FALSE	canonical	1	1	junction_7	17.2732991609977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACTCAGTCACAACGTG	NA	False	NA	NA	False	AATAAA	-24	NA	94320574	94338815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
Isoform_48667_297	chr3	+	1589	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	13	10	1	-10	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAAAGAA	8503	False	NA	NA	False	NA	NA	NA	94350644	94356005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
Isoform_4867_4	chr11	-	5401	31	FSM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	-37	2119	-37	-2119	multi-exon	TRUE	canonical	3	26	junction_30	11.9341247409826	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTATTTATAACCGCT	9624	False	NA	NA	False	AATATA	-14	NA	8614572	8383770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
Isoform_48670_18	chr3	+	1513	6	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	5	-10	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	87.5337649138891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAAAGAA	8495	False	NA	NA	False	NA	NA	NA	94350636	94356005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94355092
Isoform_48671_9	chr3	+	5110	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-174	1463	-174	-12	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAATGAAAAATGA	NA	False	NA	56	True	NA	NA	NA	94744703	94788174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_48672_3	chr3	+	4976	18	FSM	ENSMUSG00000038902.15	ENSMUST00000107266.8	4100	18	-345	-531	-199	-12	multi-exon	FALSE	canonical	3	9	junction_2	17.1879494279083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAATGAAAAATGA	NA	False	NA	56	True	NA	NA	NA	94744678	94788174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
Isoform_48673_19	chr3	+	1702	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	10	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2664	False	NA	NA	False	AATAAA	-14	NA	94840376	94852069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
Isoform_48674_8	chr3	+	4071	10	NIC	ENSMUSG00000005774.13	novel	4014	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861398	94868660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_48676_7	chr3	+	4121	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	0	212	0	0	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861418	94868660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
Isoform_48677_4	chr3	+	3310	12	FSM	ENSMUSG00000038861.15	ENSMUST00000107251.9	2895	12	62	-477	62	-158	multi-exon	FALSE	canonical	2	3	junction_2	12.4389417848655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTGTTGCTTCTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	94882248	94913934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94882397_94891293_94892231_94896613_94896659_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_48678_35	chr3	+	3261	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	209	222	64	-160	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882250	94913932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_48679_17	chr3	+	3463	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	7	222	7	-160	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882048	94913932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
Isoform_4868_9	chr11	-	2032	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	63	2545	0	-326	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	8961128	8945681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
Isoform_48680_11	chr3	+	2281	5	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	118	9	-118	intron_retention	FALSE	canonical	0	0	junction_1	386.814797416024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2589	False	NA	45	True	AATAAA	-13	NA	95018361	95030244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572
Isoform_48681_469	chr3	+	1309	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	118	9	-118	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2589	False	NA	45	True	AATAAA	-13	NA	95018361	95030244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
Isoform_48682_24	chr3	+	1427	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	29	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAATAA	2589	False	NA	NA	False	NA	NA	NA	95018361	95030362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
Isoform_48683_40	chr3	+	2423	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	-25	-4	-25	4	multi-exon	FALSE	canonical	1	7	junction_2	5.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGTGGTTTTATTTC	8586	False	NA	21	True	ATTAAA	-17	NA	95041373	95046833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95042308_95044935_95045298_95045706
Isoform_48685_5	chr3	+	3447	18	NIC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTGCCTGACTTTCCT	NA	False	NA	10	True	AATACA	-13	NA	95067778	95080965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_48686_3	chr3	+	3812	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	11	True	AATAAA	-20	NA	95067775	95081327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_48687_4	chr3	+	3785	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	23.0883664290019	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTCACATCAGCAA	NA	False	NA	9	True	AATAAA	-18	NA	95067804	95081325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_48688_3	chr3	+	3961	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	26.8983929948681	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067793	95081335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
Isoform_48689_4	chr3	+	3554	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	24.8891989067994	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067733	95080964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_4869_7	chr11	-	2057	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	3	-327	intron_retention	FALSE	canonical	3	72	junction_5	46.4880937137979	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAAAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	8961157	8945682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
Isoform_48690_4	chr3	+	3475	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTGCCTGACTTTCCT	NA	False	NA	10	True	AATACA	-13	NA	95067764	95080965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_48691_7	chr3	+	3803	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067804	95081333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
Isoform_48693_567	chr3	+	2737	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	69	-1	-9	1	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGTTTCAGAGTAATCA	1943	False	NA	22	True	AATAAA	-12	NA	95136111	95143721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_48694_12	chr3	+	3184	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	-381	2	-381	-2	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAACGGTTTCAGAGTAA	1493	False	NA	19	True	AATAAA	-9	NA	95135661	95143718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_487_460	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
Isoform_48702_15	chr3	+	2874	12	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	65.9633005905055	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95188650	95203477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95188923_95189993_95190056_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_48703_5	chr3	+	2809	11	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	55.015997673404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95188648	95203472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95188923_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_48705_63	chr3	+	2846	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	-21	2	-21	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190233	95203475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_48709_116	chr3	+	2737	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	88	2	88	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190342	95203475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_4871_7	chr11	-	3009	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	-27	-175	0	-89	multi-exon	FALSE	canonical	3	23	junction_1	194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758959	11750376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11753064_11755958_11756216_11758894
Isoform_48713_9	chr3	+	2690	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	108	2	108	1	multi-exon	FALSE	canonical	3	18	junction_8	52.7870167352017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190362	95203475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_48716_5	chr3	+	2819	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	-23	4	-23	1	multi-exon	FALSE	canonical	3	18	junction_8	52.7870167352017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGCGTTCCTACCTT	NA	False	NA	11	True	AATAAA	-12	NA	95190231	95203473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_48718_30	chr3	+	2297	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	522	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.7119282875444	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95194031	95203477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
Isoform_48720_11	chr3	+	2245	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	544	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	70.8557916466716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95194053	95203474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
Isoform_48723_428	chr3	+	1997	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	183	36	0	-36	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4501	False	NA	9	True	ATTAAA	-16	NA	95222577	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48724_43	chr3	+	2137	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	43	36	43	-36	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4361	False	NA	9	True	ATTAAA	-16	NA	95222437	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48725_87	chr3	+	2036	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	144	36	-19	-36	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4462	False	NA	9	True	ATTAAA	-16	NA	95222538	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48726_13	chr3	+	2226	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	-46	36	-46	-36	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4272	False	NA	9	True	ATTAAA	-16	NA	95222348	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48727_11	chr3	+	2261	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-56	-36	intron_retention	FALSE	canonical	3	406	junction_9	33.6675834125276	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4425	False	NA	9	True	ATTAAA	-16	NA	95222501	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48730_7	chr3	+	2298	9	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-5	-36	intron_retention	FALSE	canonical	3	406	junction_8	25.2929708614864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4476	False	NA	9	True	ATTAAA	-16	NA	95222552	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_48734_7	chr3	+	938	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-84	4	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCTTCCTCTATTA	NA	False	NA	12	True	AGTAAA	-26	NA	95334897	95338402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
Isoform_48735_33	chr3	+	4345	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	23	-1669	7	-1	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGTGTTGTGTTGTGT	NA	False	NA	NA	False	TTTAAA	-21	NA	95341721	95404547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
Isoform_48739_4	chr3	+	2684	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	83.8073051654387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGGATCCTCTGAAATT	NA	False	NA	2	True	ATTAAA	-15	NA	95341714	95402882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
Isoform_4874_40	chr11	-	2858	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	30	86	0	-86	multi-exon	FALSE	canonical	3	61	junction_2	284.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	-7	True	AATAAA	-22	NA	11758932	11750373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11753064_11756095_11756216_11758884
Isoform_48740_4	chr3	+	4342	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	83.8073051654387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTGTGTTGTGTTGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	95341720	95404546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
Isoform_48741_5	chr3	+	4295	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	20	10	6	-7	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATAAATTGTGTTGTG	NA	False	NA	NA	False	TTTAAA	-15	NA	95341720	95404541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
Isoform_48742_6	chr3	+	1675	15	NIC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-32	187	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	83.0812240877466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466955	95495169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_48744_12	chr3	+	1653	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	1	-269	1	190	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466989	95495172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_48745_22	chr3	+	1390	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-1	-4	0	0	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
Isoform_48746_24	chr3	+	2799	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	37	0	2	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	4	True	AATAAA	-15	NA	95496281	95526553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
Isoform_48748_159	chr3	+	2246	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-5	1604	4	-1604	multi-exon	FALSE	canonical	3	422	junction_2	58	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGATCTTCTCGAATTC	404	False	NA	27	True	NA	NA	NA	95532325	95537809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95532488_95534059_95534186_95535851
Isoform_48749_9	chr3	+	3884	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-38	-1	-11	1	multi-exon	FALSE	canonical	3	422	junction_2	58	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAACTAGACCTG	371	False	NA	11	True	AATAAA	-22	NA	95532292	95539414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95532488_95534059_95534186_95535851
Isoform_4875_367	chr11	-	2844	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	29	88	2	-88	multi-exon	FALSE	canonical	3	411	junction_2	109.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758930	11750375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11753064_11756095_11756216_11758894
Isoform_48751_19	chr3	+	1162	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	-31	-1	-13	1	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAACTAGACCTG	369	False	NA	11	True	AATAAA	-22	NA	95532290	95539414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
Isoform_48759_373	chr3	+	2226	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-44	1236	-44	1117	multi-exon	FALSE	canonical	3	754	junction_2	15.5	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCCAAGCTTTGTTT	6373	False	NA	35	True	AATAAA	-26	NA	95566054	95569251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_48760_152	chr3	+	3463	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-44	-1	-44	1	multi-exon	FALSE	canonical	3	754	junction_2	15.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGGTGTGGTATGGGT	6373	False	NA	15	True	AATAAA	-15	NA	95566054	95570488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_48761_641	chr3	+	2190	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	1236	-8	1117	multi-exon	FALSE	canonical	3	754	junction_2	15.5	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCCAAGCTTTGTTT	6409	False	NA	35	True	AATAAA	-26	NA	95566090	95569251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_48762_250	chr3	+	3427	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	-1	-8	1	multi-exon	FALSE	canonical	3	754	junction_2	15.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGGTGTGGTATGGGT	6409	False	NA	15	True	AATAAA	-15	NA	95566090	95570488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95566799_95567071_95567320_95568017
Isoform_4877_25	chr11	-	2903	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	-30	88	-27	-88	multi-exon	FALSE	canonical	3	411	junction_2	109.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758989	11750375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11753064_11756095_11756216_11758894
Isoform_48784_76	chr3	+	2046	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-2	819	-2	24	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	4	True	AATAAA	-19	NA	95801278	95804781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_48786_14	chr3	+	2085	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-43	821	-43	22	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGACTTGGCTTTAAG	NA	False	NA	2	True	AATAAA	-17	NA	95801237	95804779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_48787_5	chr3	+	2385	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-2	480	-2	-24	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATTAAAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	95801278	95805120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
Isoform_48788_11	chr3	+	1696	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-72	-23	14	23	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGACTTGGCTTTAAGA	NA	False	NA	3	True	AATAAA	-18	NA	95801294	95804780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
Isoform_48789_3	chr3	+	2940	3	NIC	ENSMUSG00000015750.16	novel	2679	4	NA	NA	13	18	intron_retention	FALSE	canonical	3	325	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGGGGACTTGGCTT	NA	False	NA	-2	True	AATAAA	-13	NA	95801293	95804775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_95802304_95802454_95803158_95803548
Isoform_48794_9	chr3	+	987	5	ISM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	-18	7533	14	-7	5prime_fragment	FALSE	canonical	3	1505	junction_2	101.087523958202	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGGTGAATGGAAACT	NA	False	NA	NA	False	AATGAA	-7	NA	95836571	95845344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193
Isoform_48796_24	chr3	+	3189	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	13	-1821	8	-4	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTAGCTTCAGTGTGTG	NA	False	NA	101	True	AATAAA	-18	NA	95836602	95854698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
Isoform_48799_348	chr3	+	3225	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	45	4	8	-4	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTAGCTTCAGTGTGTG	NA	False	NA	101	True	AATAAA	-18	NA	95836602	95854698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
Isoform_48806_13	chr3	+	2099	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	218	-402	3	402	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTGCCATTTTATTT	NA	False	NA	10	True	ATTAAA	-12	NA	96079865	96085282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
Isoform_48807_1089	chr3	+	1524	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	218	173	3	-173	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGGTGAAGTAACTTT	NA	False	NA	22	True	AATAAA	-18	NA	96079865	96084707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
Isoform_48813_4	chr3	+	1381	2	ISM	ENSMUSG00000038403.11	ENSMUST00000049208.11	2028	4	2178	-1	2178	1	3prime_fragment	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTCTGTTGCCTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	96434665	96436527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_96434899_96435379
Isoform_48814_675	chr3	+	2799	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	3	25	0	0	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTCTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	96465275	96469174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
Isoform_48818_501	chr3	+	2796	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	-1	0	0	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTCTTTTCTT	NA	False	NA	20	True	AATAAA	-15	NA	96465275	96469174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
Isoform_4882_17	chr11	-	2984	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	2	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758930	11750374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
Isoform_48826_48	chr3	+	1715	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	10	879	10	-879	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCCTTCTCTTCCTTTT	8652	False	NA	11	True	ATTAAA	-23	NA	96537265	96540228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_48828_697	chr3	+	713	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	1891	0	0	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_4883_7	chr11	-	3142	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	2	-90	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_2	266.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGACGGAGTTGCTTC	NA	False	NA	-11	True	AATAAA	-18	NA	11758930	11750377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11753064_11756095_11756216_11758594
Isoform_48830_614	chr3	+	710	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	1891	0	0	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_48831_39	chr3	+	1722	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	879	0	-879	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCCTTCTCTTCCTTTT	8642	False	NA	11	True	ATTAAA	-23	NA	96537255	96540228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
Isoform_48838_3	chr3	+	2218	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	132	-1333	-21	0	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAGAAAGGGTCAAAA	NA	False	NA	3	True	AATAAA	-19	NA	96542947	96552682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_48839_9	chr3	+	1545	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	166	-694	-6	1	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTATTCAATTCAA	NA	False	NA	10	True	ATTAAA	-17	NA	96542981	96552043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_48840_3	chr3	+	1740	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	-30	-693	-30	0	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542785	96552042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
Isoform_48841_4	chr3	+	2394	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	38	-8	-32	8	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTCAAAATTTGTGTT	NA	False	NA	11	True	AATAAA	-27	NA	96542783	96552690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_48842_13	chr3	+	2193	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	236	-5	-6	5	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGGGTCAAAATTTGT	NA	False	NA	8	True	AATAAA	-24	NA	96542981	96552687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_48843_80	chr3	+	1549	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	236	639	-6	1	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTATTCAATTCAA	NA	False	NA	10	True	ATTAAA	-17	NA	96542981	96552043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_48844_21	chr3	+	1746	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	38	640	-32	0	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542783	96552042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
Isoform_48845_3	chr3	+	1890	3	NIC	ENSMUSG00000028102.16	novel	2424	4	NA	NA	-6	1	intron_retention	FALSE	canonical	3	279	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTATTCAATTCAA	NA	False	NA	10	True	ATTAAA	-17	NA	96542981	96552043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_96543060_96543989_96544649_96550890
Isoform_48846_6	chr3	+	3846	13	FSM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	206	0	10	0	multi-exon	FALSE	canonical	3	6	junction_1	35.4200978730061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	477	False	NA	16	True	AATAAA	-16	NA	96577652	96598348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
Isoform_48847_7	chr3	+	3306	14	NIC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	34.4249462320121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	477	False	NA	18	True	AATAAA	-18	NA	96577652	96598350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
Isoform_48848_6	chr3	+	2893	4	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	12954	-25	3188	2	intron_retention	FALSE	canonical	3	87	junction_1	10.2740233382816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	18	True	AATAAA	-18	NA	96590596	96598350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_96592491_96596461_96596552_96596760_96596827_96597507
Isoform_4885_28	chr11	-	2753	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	3	88	0	-88	multi-exon	FALSE	canonical	3	48	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758959	11750375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11753064_11758894
Isoform_48850_12	chr3	+	3314	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	6	0	6	0	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2594	False	NA	5	True	AATAAA	-15	NA	96603705	96613278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_48852_20	chr3	+	2876	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-20	2	-20	-2	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGCGTCATGGAGGG	2568	False	NA	3	True	AATAAA	-13	NA	96603679	96613276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_48853_3	chr3	+	2955	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	7	-104	7	-4	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATTTAAAGTGTTTATT	2595	False	NA	109	True	NA	NA	NA	96603706	96613382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_48854_10	chr3	+	2684	15	FSM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	-2	13	-2	-2	multi-exon	FALSE	canonical	3	19	junction_2	45.7727304969111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGCGTCATGGAGGG	3319	False	NA	3	True	AATAAA	-13	NA	96604430	96613276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_48855_4	chr3	+	3207	13	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	24	junction_10	47.3723430799965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGCGTCATGGAGGG	3332	False	NA	3	True	AATAAA	-13	NA	96604443	96613276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
Isoform_48856_10	chr3	+	3251	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	34	108	0	0	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3321	False	NA	5	True	AATAAA	-15	NA	96604432	96613278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
Isoform_48858_73	chr3	+	2791	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	32	108	-2	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3319	False	NA	5	True	AATAAA	-15	NA	96604430	96613278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_48859_4	chr3	+	2912	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	1	18	1	-18	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAACAT	3288	False	NA	95	True	NA	NA	NA	96604399	96613368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
Isoform_4886_3	chr11	-	1052	6	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	61110	-1	-6377	-1	3prime_fragment	FALSE	canonical	3	63	junction_5	20.3666393889615	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11779298	11764101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101
Isoform_48860_113	chr3	+	2165	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	45	-1	37	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4840	False	NA	15	True	AATAAA	-22	NA	96635024	96698469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_48862_28	chr3	+	2112	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-104	201	-104	-201	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAAGCTCATTTTTC	4691	False	NA	21	True	ATTAAA	-21	NA	96634875	96698267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_48863_22	chr3	+	2269	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-59	-1	-59	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4736	False	NA	15	True	AATAAA	-22	NA	96634920	96698469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_48864_22	chr3	+	2341	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-131	-1	-131	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4664	False	NA	15	True	AATAAA	-22	NA	96634848	96698469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_4887_11	chr11	-	1567	12	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	17148	0	7369	0	3prime_fragment	FALSE	canonical	3	45	junction_6	24.3211977738973	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11823260	11764102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
Isoform_48871_6	chr3	+	2075	7	NIC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	119	junction_1	220.417028985209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4813	False	NA	15	True	AATAAA	-22	NA	96634997	96698469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_96635227_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
Isoform_48874_5	chr3	+	2237	9	NIC	ENSMUSG00000038298.15	novel	531	2	NA	NA	16	3	intron_retention	FALSE	canonical	2	4	junction_1	7.93626958967499	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTTATAGAAGTGTGC	NA	False	NA	NA	False	ATTAAA	-13	NA	96740557	96777791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_96740921_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
Isoform_48875_909	chr3	+	1609	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	86	59	86	-3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCATCATGTTGAGAT	NA	False	NA	14	True	AATAAA	-14	NA	97066178	97083831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_48876_28	chr3	+	1758	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	-2	-2	-2	2	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGTGTGTAA	NA	False	NA	13	True	NA	NA	NA	97066090	97083892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_48878_142	chr3	+	1695	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	0	59	0	-3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCATCATGTTGAGAT	NA	False	NA	14	True	AATAAA	-14	NA	97066092	97083831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_48879_143	chr3	+	1671	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	86	-3	86	3	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCCTGTGTGTAAA	NA	False	NA	14	True	NA	NA	NA	97066178	97083893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
Isoform_4888_5	chr11	-	2187	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-1041	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	27.3593807365173	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	4597	False	NA	-2	True	AATAAA	-20	NA	11831670	11764101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
Isoform_4889_6	chr11	-	1959	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-813	-1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_14	27.3593807365173	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	4825	False	NA	-2	True	AATAAA	-20	NA	11831442	11764101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
Isoform_48892_12	chr3	+	4155	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	103	748	101	-17	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97565630	97580380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_48894_4	chr3	+	4236	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	19	751	17	-20	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAGTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97565546	97580377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
Isoform_48895_4	chr3	+	1188	4	FSM	ENSMUSG00000027879.10	ENSMUST00000122288.2	1177	4	-9	-2	2	2	multi-exon	FALSE	canonical	3	341	junction_2	4.18993502999218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	TTTAAA	-31	NA	97808533	97822529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815
Isoform_48896_41	chr3	+	2778	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	32	0	-3	0	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTGTGAAGTTCTGT	NA	False	NA	18	True	AATAAA	-17	NA	97808537	97830592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_48897_73	chr3	+	1414	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	32	1364	-3	61	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCTTTGTTGTTTGTT	NA	False	NA	36	True	ACTAAA	-25	NA	97808537	97829228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_48898_157	chr3	+	1360	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	37	1413	0	12	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATATAGTATTGCTTGA	NA	False	NA	-13	True	ATTAAA	-23	NA	97808542	97829179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_48899_4	chr3	+	2782	5	FSM	ENSMUSG00000027879.10	ENSMUST00000130778.2	1355	5	-2	-1425	-2	0	multi-exon	FALSE	canonical	3	31	junction_1	133.810500335362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTGTGAAGTTCTGT	NA	False	NA	18	True	AATAAA	-17	NA	97808529	97830592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97808737_97814540_97814647_97819894_97820056_97821815_97821963_97828431
Isoform_4890_6	chr11	-	1015	5	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	42.6438741204408	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGAGTAAGCGTCT	NA	False	NA	-2	True	AATAAA	-20	NA	11772958	11764101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772778
Isoform_48901_19	chr3	+	2536	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	28	1846	0	-846	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACGTTGTACTGTGACTT	NA	False	NA	8	True	NA	NA	NA	99048411	99125673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
Isoform_48903_3	chr3	+	2286	5	NIC	ENSMUSG00000004233.15	novel	4410	6	NA	NA	-6	-847	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.1383571472171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTTGTACTGTGACT	NA	False	NA	7	True	NA	NA	NA	99048402	99125672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_99048505_99111851_99111933_99112540_99112627_99121971_99122091_99123774
Isoform_48904_10	chr3	+	3565	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	1	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTGTTTGTTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	99161076	99261575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
Isoform_48905_3	chr3	+	2067	13	FSM	ENSMUSG00000027865.11	ENSMUST00000106997.2	2014	13	-53	0	-53	0	multi-exon	FALSE	canonical	3	84	junction_11	11.971029845237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100069780	100109786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
Isoform_48906_54	chr3	+	2590	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	92	326	-45	0	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTTCTCAGAGTCA	NA	False	NA	22	True	AGTAAA	-33	NA	100069788	100113971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
Isoform_4891_5	chr11	-	992	5	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	40.5362492098122	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11772690	11764102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772532
Isoform_48910_3	chr3	+	2922	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	89	-3	-48	3	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAAGGTGTTCTATGGT	NA	False	NA	NA	False	AATAAA	-16	NA	100069785	100114300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
Isoform_48911_24	chr3	+	2331	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	-27	2308	-27	1	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGACTTCAAGTGCTT	4304	False	NA	8	True	ATTAAA	-19	NA	100829763	100839019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
Isoform_48912_4	chr3	+	1850	2	FSM	ENSMUSG00000042035.12	ENSMUST00000198995.5	1855	2	6	-1	6	1	multi-exon	FALSE	canonical	3	79	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAGAAAA	258	False	NA	NA	False	NA	NA	NA	101284404	101286857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_101284519_101285121
Isoform_48916_9	chr3	+	3022	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	401	1061	-27	-1061	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTGAGTTATCTTAAA	NA	False	NA	5	True	ATTAAA	-17	NA	102642245	102678547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
Isoform_48918_5	chr3	+	4010	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	404	70	-24	-70	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAGTTAAAGAAATTTAA	NA	False	NA	NA	False	ATTAAA	-12	NA	102642248	102679538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
Isoform_48919_12	chr3	+	509	3	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	27	11047	5	61	5prime_fragment	FALSE	canonical	3	384	junction_2	20	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACTGAACTGAAATCG	NA	False	NA	NA	False	AATAAA	-6	NA	102903050	102904728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_102903284_102903471_102903578_102904558
Isoform_48921_87	chr3	+	2364	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	27	4984	5	1281	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGATTTGCTCATTTT	NA	False	NA	12	True	AATAAA	-9	NA	102903050	102910791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
Isoform_48929_13	chr3	+	4133	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	185	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927926	102965502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_4893_16	chr11	-	5057	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	3	1	3	-1	multi-exon	TRUE	canonical	3	35	junction_14	7.38135319572231	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCCTGTCGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	11987398	11880508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
Isoform_48935_21	chr3	+	4038	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	4	-193	-1	-2	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927926	102965500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_48936_74	chr3	+	2980	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	4	865	-1	-6	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCACAGTTGCAGC	NA	False	NA	26	True	AATAAA	-22	NA	102927926	102964442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_48937_10	chr3	+	4068	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-31	-188	-31	-7	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGCACCTAGCGCTT	NA	False	NA	15	True	AATAAA	-18	NA	102927891	102965495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
Isoform_48947_26	chr3	+	4408	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	54	8	-9	0	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTATTTTCCCTACTG	NA	False	NA	18	True	AATAAA	-20	NA	102965654	102975222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
Isoform_4895_3	chr11	-	5055	17	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.9949767774012	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTGTCCTGTCGTG	NA	False	NA	NA	False	AATAAA	-13	NA	11987400	11880510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896801_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
Isoform_48953_7	chr3	+	1217	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	12	3241	12	274	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGTAATGTGATCAG	NA	False	NA	26	True	CATAAA	-36	NA	102965612	102971989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
Isoform_48958_3	chr3	+	436	2	ISM	ENSMUSG00000070385.13	ENSMUST00000177250.2	751	6	4427	-9	4427	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACACCGCGAGTGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	103006192	103007031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_103006453_103006855
Isoform_48959_4	chr3	+	3107	7	NIC	ENSMUSG00000007379.16	novel	3060	12	NA	NA	-1	-9225	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	26.2466929133727	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103009974	103055363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827
Isoform_4896_17	chr11	-	5589	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	25	1	25	-1	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414932	12186676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_48960_54	chr3	+	4943	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCCACAGATCTC	NA	False	NA	NA	False	GATAAA	-10	NA	103009989	103077048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_48961_5	chr3	+	3918	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	-23	6	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGGTGTTTACAATTT	NA	False	NA	NA	False	ATTAAA	-28	NA	103009952	103075986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
Isoform_48964_50	chr3	+	1089	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-20	336	3	3	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5026	False	NA	51	True	AATAAA	-19	NA	103079067	103086146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_48967_2522	chr3	+	1051	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	94	322	0	3	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5023	False	NA	51	True	AATAAA	-19	NA	103079064	103086146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_48968_162	chr3	+	1104	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	39	324	-9	1	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	4968	False	NA	49	True	AATAAA	-17	NA	103079009	103086144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_48969_141	chr3	+	1387	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	81	-1	-13	1	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATGTTT	5010	False	NA	NA	False	NA	NA	NA	103079051	103086469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_48979_58	chr3	+	1131	6	FSM	ENSMUSG00000005687.15	ENSMUST00000155520.8	737	6	-13	-381	0	1	multi-exon	FALSE	canonical	3	3472	junction_3	182.474107752306	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5023	False	NA	49	True	AATAAA	-17	NA	103079064	103086144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
Isoform_48985_10	chr3	+	1308	6	ISM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-151	30843	-151	-1709	5prime_fragment	FALSE	canonical	3	101	junction_1	10.7962956610126	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAATAAGAAAGGAAAAT	NA	False	NA	NA	False	ATTAAA	-27	NA	103187043	103232035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960
Isoform_48986_37	chr3	+	2836	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-38	1	-3	1	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCTGTCGTCACT	NA	False	NA	16	True	ATTAAA	-20	NA	103716905	103729340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
Isoform_48987_5	chr3	+	2906	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-110	3	-2	-1	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGGTGCCTGTCGTCA	NA	False	NA	14	True	ATTAAA	-18	NA	103716833	103729338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
Isoform_48988_30	chr3	+	631	2	ISM	ENSMUSG00000044098.15	ENSMUST00000151927.4	3649	8	10	35467	10	-31732	5prime_fragment	FALSE	canonical	3	60	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAGAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103821892	103835720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_103822470_103835666
Isoform_48990_18	chr3	+	3229	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	97	1	-11	-1	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875670	103914803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_48991_12	chr3	+	3161	18	NIC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875681	103914803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
Isoform_48992_767	chr3	+	3219	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	0	1207	0	-1207	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCTTCCGCATGTT	NA	False	NA	20	True	AATAAA	-21	NA	104545983	104564571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_48993_90	chr3	+	3259	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-40	1207	-40	-1207	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCTTCCGCATGTT	NA	False	NA	20	True	AATAAA	-21	NA	104545943	104564571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_48997_12	chr3	+	3370	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-152	1208	-152	-1208	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCTTCCGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	104545831	104564570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
Isoform_4900_4	chr11	-	5559	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	-17	-1	-17	-1	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414977	12186676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_49001_5	chr3	+	1716	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	3	2	3	-2	multi-exon	FALSE	canonical	3	56	junction_1	13.4200881305638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGTGTGTCATTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	104688374	104693332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
Isoform_49002_3	chr3	+	1666	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_8	22.6949714341098	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGTGTGTCATTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	104688373	104693332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
Isoform_49003_109	chr3	+	1056	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	146	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_49004_16	chr3	+	1277	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	-75	0	-75	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696128	104701775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_49005_5	chr3	+	1074	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	0	-115	0	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
Isoform_49008_38	chr3	+	1960	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	565	3203	1	1	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTAGTGTATTTTCTTTG	645	False	NA	30	True	AATACA	-41	NA	104772383	104834177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
Isoform_49011_43	chr3	+	1966	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-11	662	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866812	105875505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
Isoform_49014_721	chr3	+	1987	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	134	1561	-5	672	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCTGTTACTTATTAC	NA	False	NA	22	True	AATAAA	-26	NA	105866818	105875515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_49015_13	chr3	+	3573	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	111	-2	-28	2	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGCTTTTGTTGTTGT	NA	False	NA	14	True	AATAAA	-33	NA	105866795	105877078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_49016_72	chr3	+	2058	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	1571	53	662	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866737	105875505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_49017_128	chr3	+	3159	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	134	389	-5	-389	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTGGGGGCTCTAT	NA	False	NA	6	True	AATAAA	-17	NA	105866818	105876687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_49018_21	chr3	+	3240	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	389	53	-389	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTGGGGGCTCTAT	NA	False	NA	6	True	AATAAA	-17	NA	105866737	105876687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
Isoform_49028_12	chr3	+	2190	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	35	1046	2	-1	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTTGTCATGAAAATG	NA	False	NA	NA	False	AATAAA	-13	NA	106455148	106482160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_49029_17	chr3	+	1281	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	34	1956	1	-911	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGTTTGCTACTTTA	NA	False	NA	9	True	AATAAA	-18	NA	106455147	106481250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_4903_19	chr11	-	5409	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	34	-1	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12414923	12186676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_49032_3	chr3	+	1254	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	-14	-917	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATTGTAGTGTTTGCT	NA	False	NA	3	True	AATAAA	-12	NA	106455165	106481244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
Isoform_49034_324	chr3	+	735	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	6	2	6	1	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTTCATTTCTGGT	3157	False	NA	10	True	AATAAA	-14	NA	107186320	107191396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
Isoform_49036_21	chr3	+	942	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	2	1	2	-1	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTCTAGATGGATTT	NA	False	NA	10	True	AATAAA	-15	NA	107803138	107806001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
Isoform_49038_10	chr3	+	2310	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-28	2748	-28	-2739	multi-exon	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCCACACCTGTGAGG	508	False	NA	NA	False	AAAACA	-22	NA	108093622	108096344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108093995_108094406
Isoform_49039_1487	chr3	+	992	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	241	6	241	-6	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	1487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTGTTAATAGTCT	NA	False	NA	5	True	AATAAA	-9	NA	108164482	108187284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
Isoform_49043_3	chr3	+	2768	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-3	4031	-3	-3958	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAATTTCTGTCTTTTG	4986	False	NA	10	True	TTTAAA	-16	NA	108191403	108264796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
Isoform_49045_81	chr3	+	1642	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-23	68	-3	-16	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7029	False	NA	0	True	AATAAA	-8	NA	108291151	108295479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49047_8	chr3	+	1728	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7031	False	NA	0	True	AATAAA	-8	NA	108291153	108295479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49048_106	chr3	+	1616	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	54	16	14	-16	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7086	False	NA	0	True	AATAAA	-8	NA	108291208	108295479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49049_67	chr3	+	1388	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	14	284	1	-284	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGTCTCCTTCCATCT	7046	False	NA	20	True	AATAAA	-16	NA	108291168	108295211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49050_4	chr3	+	2526	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	8	-16	intron_retention	FALSE	canonical	3	329	junction_1	62.0118716232805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7060	False	NA	0	True	AATAAA	-8	NA	108291182	108295479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49051_10	chr3	+	1761	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	-3	-16	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTCTGTATA	7029	False	NA	0	True	AATAAA	-8	NA	108291151	108295479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
Isoform_49055_60	chr3	+	1285	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	1	1157	1	-4	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479015	108489381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
Isoform_49056_3	chr3	+	1651	4	FSM	ENSMUSG00000048100.14	ENSMUST00000056292.8	1655	4	0	4	0	-4	multi-exon	TRUE	canonical	2	8	junction_1	76.856287243718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479014	108489381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108479430_108480195_108480275_108485431_108485530_108488322
Isoform_49057_12	chr3	+	4174	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	49	-1	-24	1	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTTTTCTCACGGTCT	NA	False	NA	4	True	AATAAA	-19	NA	108498643	108553036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
Isoform_49058_30	chr3	+	2016	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	27	0	-9	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	6	True	AATAAA	-18	NA	108561255	108586156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
Isoform_4906_5	chr11	-	5302	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-33	2	-33	0	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414892	12186677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
Isoform_49060_3	chr3	+	3648	11	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	126	junction_1	24.3014402865345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	6	True	AATAAA	-18	NA	108561255	108586156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
Isoform_49061_64	chr3	+	2083	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGTCTGGTGTGCA	6624	False	NA	3	True	AATAAA	-15	NA	108561256	108586153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
Isoform_49063_3	chr3	+	2377	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	51.8028685507149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGTCTGGTGTGCA	6624	False	NA	3	True	AATAAA	-15	NA	108561256	108586153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_108561662_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
Isoform_49064_3	chr3	+	3387	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	41	3	28	-3	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTGTTTTCTAATT	4516	False	NA	NA	False	ATTAAA	-19	NA	109030505	109075770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
Isoform_49065_3	chr3	+	1118	2	ISM	ENSMUSG00000033554.18	ENSMUST00000199970.2	520	3	-33	3549	-3	962	5prime_fragment	FALSE	canonical	3	271	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGT	7737	False	NA	NA	False	NA	NA	NA	115681810	115683090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_115681927_115682088
Isoform_49066_33	chr3	+	1321	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	11	244	0	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7769	False	NA	8	True	AATAAA	-18	NA	115681842	115722737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
Isoform_49067_10	chr3	+	2993	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	12	-5	-4	5	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGGTGACGTGTTCCG	6	False	NA	28	True	AATAAA	-39	NA	115801122	115822671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
Isoform_49072_3	chr3	+	2681	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	85	74	85	-74	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGCTTTGTCCACATT	137	False	NA	24	True	ATTAAA	-12	NA	115801953	115822535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
Isoform_49078_3	chr3	+	3308	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	-12	5	-12	-5	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTTGTATGCCTTCA	NA	False	NA	5	True	AATAAA	-14	NA	116306706	116343625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_49079_4	chr3	+	3259	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	43	-1	-6	1	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGCCTTCATAGTAG	NA	False	NA	11	True	AATAAA	-20	NA	116306761	116343631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
Isoform_49087_5	chr3	+	2143	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	28	-277	0	277	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCCAGGTTCTTTTCTA	NA	False	NA	7	True	NA	NA	NA	116388658	116415528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
Isoform_49088_3	chr3	+	2283	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	-10	131	-5	-116	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACTGGATTGTATCA	NA	False	NA	NA	False	AGTAAA	-40	NA	116388646	116422665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
Isoform_49094_6	chr3	+	2081	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-44	0	-44	0	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAGGTATTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	121085377	121156743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
Isoform_49095_22	chr3	+	983	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-20	1074	-20	313	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTCTCTTGGGAC	NA	False	NA	25	True	AATAAA	-26	NA	121085401	121155669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
Isoform_49101_3306	chr3	+	2026	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	22	1	22	-1	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	3306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGGCTGGTTATTTTC	NA	False	NA	26	True	AATAAA	-26	NA	121220167	121251855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
Isoform_4911_13	chr11	-	429	4	FSM	ENSMUSG00000078974.11	ENSMUST00000109642.8	691	4	11	251	11	0	multi-exon	FALSE	canonical	3	167	junction_3	2857.39815605425	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	False	NA	-38	True	AATAAA	-19	NA	16458155	16451637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458099
Isoform_49114_39	chr3	+	1876	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-9	5	-9	-5	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCGCATTTATATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	121517176	121528692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
Isoform_49115_133	chr3	+	1688	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	103	3798	-8	-9	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAATTTAATGTGTG	NA	False	NA	7	True	AATAAA	-19	NA	122039308	122060583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_49116_43	chr3	+	1856	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-58	3791	-58	-2	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAATGTGTGTGTTCTT	NA	False	NA	14	True	AATAAA	-26	NA	122039147	122060590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_49117_4	chr3	+	4824	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	12	753	12	-753	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCATAAAGCTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	122039217	122063628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_49118_17	chr3	+	2576	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	37	2976	37	813	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGCAGTGCGGTGT	NA	False	NA	NA	False	AATATA	-12	NA	122039242	122061405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
Isoform_4913_556	chr11	-	421	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	329	4	11	1	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACATTTATCAAATTTTA	NA	False	NA	-42	True	AATAAA	-15	NA	16458155	16451641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
Isoform_49138_138	chr3	+	2402	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	20	7	-10	-7	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAATTGTGTGCCTCTT	NA	False	NA	16	True	AATAAA	-12	NA	122068056	122078913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
Isoform_49143_226	chr3	+	3086	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	215	10	170	-10	multi-exon	FALSE	canonical	3	116	junction_1	21.0877740616698	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTATCCTGTCTCT	NA	False	NA	NA	False	AATATA	-12	NA	122213641	122323830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_49144_106	chr3	+	3300	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	1	10	1	-10	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTATCCTGTCTCT	NA	False	NA	NA	False	AATATA	-12	NA	122213427	122323830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_49147_60	chr3	+	2494	8	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88270	10	-16	-10	3prime_fragment	FALSE	canonical	3	148	junction_2	11.5475945016921	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTATCCTGTCTCT	7541	False	NA	NA	False	AATATA	-12	NA	122301696	122323830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
Isoform_49150_5	chr3	+	1027	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	141	-8	141	8	multi-exon	FALSE	canonical	3	1657	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGTGTCAGATTCTCT	NA	False	NA	30	True	NA	NA	NA	122717992	122719841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122718306_122719127
Isoform_49153_20	chr3	+	3905	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	-2	0	-2	0	multi-exon	FALSE	canonical	3	54	junction_9	11.2449253935915	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123061101	123159290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_49156_4	chr3	+	3982	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-178	0	-34	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTATGTATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	127347103	127358487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
Isoform_49157_369	chr3	+	2375	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	35	3541	35	2	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326069	129428603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_4916_4	chr11	-	544	4	FSM	ENSMUSG00000087060.8	ENSMUST00000123734.8	787	4	-56	299	1	8	multi-exon	FALSE	canonical	3	11	junction_1	8.25967446224258	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATTTTGTCTTTGGT	NA	False	NA	NA	False	CATAAA	-36	NA	16901098	16885620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_16885927_16886454_16886565_16900881_16900931_16901019
Isoform_49164_139	chr3	+	2486	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	107	17	76	2	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326110	129428603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_49165_13	chr3	+	2513	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	80	17	49	2	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129326083	129428603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
Isoform_4917_312	chr11	-	1528	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	13	3	13	-3	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCAGTCTCTTTTTC	NA	False	NA	45	True	AGTAAA	-16	NA	17161555	17153200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
Isoform_49172_18	chr3	+	473	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	1993	4161	-1993	3prime_fragment	FALSE	canonical	3	92	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTAATGGGATCCCTGT	NA	False	NA	8	True	NA	NA	NA	129551567	129555540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_129551788_129555287
Isoform_49173_4	chr3	+	2467	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	-1	4161	1	3prime_fragment	FALSE	canonical	3	92	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGCACTGTCTAATT	NA	False	NA	3	True	NA	NA	NA	129551567	129557534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_129551788_129555287
Isoform_49174_11	chr3	+	1600	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	-48	9	-48	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672206	129689465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_49175_91	chr3	+	996	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	42	523	42	345	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTTTCAGCATTATTT	NA	False	NA	22	True	AATAAA	-29	NA	129672296	129688951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_49176_59	chr3	+	1507	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	45	9	45	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672299	129689465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_49177_25	chr3	+	1023	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	7	531	7	337	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTAAGGACTTTTCAG	NA	False	NA	14	True	AATAAA	-21	NA	129672261	129688943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
Isoform_49179_47	chr3	+	1277	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	26	153	-7	-153	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTTTCTAATTCCTA	NA	False	NA	7	True	AATAAA	-16	NA	129695099	129707599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
Isoform_49180_7	chr3	+	1426	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	30	0	-3	0	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	129695103	129707752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
Isoform_49181_6	chr3	+	2671	13	FSM	ENSMUSG00000028032.14	ENSMUST00000199878.5	2648	13	-22	-1	9	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8531484588242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270634	131349432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_131270745_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_49182_142	chr3	+	2492	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	106	2	9	-1	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGGTTTGTGTGCAT	NA	False	NA	5	True	AATAAA	-16	NA	131270634	131349430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_49183_5	chr3	+	2605	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	-12	7	-12	-6	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATTTATGGTTTGTG	NA	False	NA	0	True	AATAAA	-11	NA	131270516	131349425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
Isoform_49186_11	chr3	+	4125	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	24	2429	0	753	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGGTTTTTTTT	NA	False	NA	7	True	ATTAAA	-11	NA	132389928	132545020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
Isoform_49187_3	chr3	+	1659	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	-2	1444	-2	-1444	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTATTGTTTGTTACA	NA	False	NA	6	True	AATAAA	-12	NA	132797598	132815305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_49189_35	chr3	+	1562	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	95	1444	-3	-1444	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTATTGTTTGTTACA	NA	False	NA	6	True	AATAAA	-12	NA	132797695	132815305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_49190_3	chr3	+	3000	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	95	6	-3	-6	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGCCTGTAGATG	NA	False	NA	NA	False	AATAAA	-41	NA	132797695	132816743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
Isoform_49192_245	chr3	+	1208	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	8	10	-4	1	multi-exon	FALSE	canonical	3	471	junction_4	36.8801946894343	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGAACTTCTCTTTT	NA	False	NA	11	True	AATAAA	-18	NA	133015878	133083829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_49194_18	chr3	+	1398	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	-2	-170	-2	13	multi-exon	FALSE	canonical	3	471	junction_4	36.8801946894343	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTAGGCACTTTTCA	NA	False	NA	NA	False	AATAAA	-27	NA	133015868	133084009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_49197_14	chr3	+	1215	12	FSM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	-14	167	-2	1	multi-exon	TRUE	canonical	3	35	junction_11	149.418321201731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGAACTTCTCTTTT	NA	False	NA	11	True	AATAAA	-18	NA	133015868	133083829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
Isoform_49199_6	chr3	+	1034	10	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	155.731567087904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGAACTTCTCTTTT	NA	False	NA	11	True	AATAAA	-18	NA	133015878	133083829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
Isoform_492_68	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
Isoform_49207_3	chr3	+	3281	25	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	45	33681	45	-6715	5prime_fragment	FALSE	canonical	3	113	junction_21	32.5300875686221	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAATATCGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	134918342	134945691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517
Isoform_49208_18	chr3	+	1079	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	91	2	29	1	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTAGTTTTTTTTCTT	NA	False	NA	19	True	AATAAA	-29	NA	134987072	135010185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
Isoform_49209_10	chr3	+	993	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	64	2	42	1	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTAGTTTTTTTTCTT	NA	False	NA	19	True	AATAAA	-29	NA	134987085	135010185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
Isoform_49211_5	chr3	+	1472	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160047.8	1196	4	-24	-252	-7	13	multi-exon	FALSE	canonical	3	81	junction_1	29.6348143611905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTTTTCTTTCAT	NA	False	NA	NA	False	AAGAAA	-7	NA	135053782	135064080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217
Isoform_49212_4	chr3	+	1395	7	ISM	ENSMUSG00000050150.17	ENSMUST00000160460.8	2072	11	-8	18608	4	50	5prime_fragment	FALSE	canonical	3	60	junction_5	29.9146935282461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTATAGCCAGGTTC	NA	False	NA	4	True	ATTAAA	-16	NA	135053810	135080236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
Isoform_49213_4	chr3	+	1868	11	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	0	1035	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTATTTTTGTTT	NA	False	NA	6	True	AATACA	-16	NA	135053794	135099879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
Isoform_49216_3	chr3	+	1623	7	NIC	ENSMUSG00000050150.17	novel	1545	6	NA	NA	-6	-22	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	33.6324083123539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	135053783	135080440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
Isoform_49217_30	chr3	+	3594	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	-2134	-30	-6	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACACTTTGGTCTTACTC	NA	False	NA	-1	True	ATTAAA	-12	NA	135144046	135173953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49219_57	chr3	+	2076	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	-616	-30	1	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTTTGACAAGTG	NA	False	NA	12	True	AATAAA	-13	NA	135144046	135172435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49222_179	chr3	+	1456	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	4	-30	-4	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144046	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49233_22	chr3	+	2071	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	59	-1392	59	3	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGTGCTAT	NA	False	NA	16	True	AATAAA	-17	NA	135144135	135172439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49234_65	chr3	+	1447	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	59	-768	59	-4	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144135	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49243_73	chr3	+	2173	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	54	277	1	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144294	135172434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49244_19	chr3	+	3668	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	83	-1247	-2	-1	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGTCTTACTCAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	135144323	135173958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49248_137	chr3	+	1520	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	88	896	3	-4	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144328	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49256_63	chr3	+	2125	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	185	1523	3	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144510	135172436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49257_64	chr3	+	1979	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	185	1669	3	9	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAGGCTGTGTTGAAGT	NA	False	NA	14	True	AATAAA	-24	NA	135144510	135172290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49261_184	chr3	+	1504	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	185	2144	3	-4	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144510	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49265_28	chr3	+	1686	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	3	2144	3	-4	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144328	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49269_19	chr3	+	1814	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-125	2144	-40	-4	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144200	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_4927_64	chr11	-	3043	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	1	1141	1	-1141	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAACTTGGTTTTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	17903874	17889896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
Isoform_4928_10	chr11	-	3288	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	1	896	1	-896	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	17903874	17889651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
Isoform_49281_17	chr3	+	1946	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-50	619	-50	-4	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144847	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49285_45	chr3	+	1913	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-17	619	-17	-4	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAGTTAGCTGCCT	NA	False	NA	69	True	AATAAA	-9	NA	135144880	135171815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
Isoform_49291_84	chr3	+	3600	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	3	72	3	-72	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCACTGACAACTTGAA	NA	False	NA	12	True	NA	NA	NA	135191374	135277093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_49292_17	chr3	+	3664	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	3	8	3	-8	multi-exon	FALSE	canonical	3	85	junction_8	25.1755554804656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAAGCTGCATTGAAC	NA	False	NA	3	True	AATAAA	-11	NA	135191374	135277157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_49295_5	chr3	+	3002	12	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	37309	2	-15	-2	3prime_fragment	FALSE	canonical	3	85	junction_3	26.9876004585883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCATTGAACACCATG	NA	False	NA	9	True	AATAAA	-17	NA	135228680	135277163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_49296_5	chr3	+	2177	10	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-661	30120	-15	0	5prime_fragment	FALSE	canonical	3	173	junction_9	16.3374900228558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136375869	136611420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059
Isoform_49300_37	chr3	+	2841	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-30	1947	-30	1	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	TATAAA	-19	NA	136375854	136641541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_49302_20	chr3	+	2913	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-4	1849	-4	99	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	NA	False	NA	NA	False	AAAAAG	-27	NA	136375880	136641639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
Isoform_49305_3	chr3	+	1664	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	50	1008	50	-1008	multi-exon	FALSE	canonical	3	67	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	137329482	137333086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137329645_137329892_137330035_137331726
Isoform_49306_15	chr3	+	843	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	64	1815	64	344	multi-exon	FALSE	canonical	3	67	junction_2	6.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	137329496	137332279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137329645_137329892_137330035_137331726
Isoform_49308_3516	chr3	+	864	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	102	103	-2	1	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	3516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTTTAAACTTGCTT	NA	False	NA	-2	True	AATAAA	-13	NA	137570349	137572580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
Isoform_49309_709	chr3	+	966	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	102	1	-2	-1	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGTGGTACTTTTGTTG	NA	False	NA	31	True	ATTAAA	-20	NA	137570349	137572682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
Isoform_49310_148	chr3	+	897	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	69	103	-17	1	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTTTAAACTTGCTT	NA	False	NA	-2	True	AATAAA	-13	NA	137570316	137572580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
Isoform_49319_12	chr3	+	1372	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	128	7977	-84	-349	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGGACTGTTAATGAC	NA	False	NA	14	True	ATTAAA	-27	NA	137573563	137614341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_4932_161	chr11	-	3604	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	26	1	-20	-1	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAATTTTGTCTTTTTC	1362	False	NA	-5	True	AATAAA	-18	NA	20062887	20012304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
Isoform_49320_6	chr3	+	1658	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	194	7625	-18	3	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAACAAAACTT	NA	False	NA	NA	False	AATGAA	-10	NA	137573629	137614693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_49321_5	chr3	+	1732	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	117	7628	-95	0	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAACAAAA	NA	False	NA	NA	False	AATGAA	-7	NA	137573552	137614690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
Isoform_49323_97	chr3	+	1296	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	0	-1	0	1	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTCTGTATAGGCCTC	80	False	NA	3	True	AATAAA	-23	NA	137624286	137634527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
Isoform_49326_4	chr3	+	332	2	ISM	ENSMUSG00000004127.13	ENSMUST00000161791.2	4258	6	-7	8247	-7	-791	5prime_fragment	FALSE	canonical	3	162	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTACACAGAGCATGCAC	NA	False	NA	47	True	AAAACA	-29	NA	137849222	137853332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_137849358_137853135
Isoform_49327_13	chr3	+	2440	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	41	1544	20	-1541	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849249	137864038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_49328_4	chr3	+	2493	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	-14	1546	-14	-1543	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCTAAAATTCAGGT	NA	False	NA	2	True	AATAAA	-17	NA	137849194	137864036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_49330_4	chr3	+	1326	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	-8	2707	-8	1296	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCGTTTGGTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	137849200	137862875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
Isoform_49331_7	chr3	+	1362	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	125	5	-26	-5	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGAGTTTTCTGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	137983379	137996454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
Isoform_49333_1503	chr3	+	1380	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	41	183	22	73	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4965	False	NA	17	True	AATAAA	-14	NA	138148894	138161077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
Isoform_49334_657	chr3	+	1404	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	17	183	-1	73	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4941	False	NA	17	True	AATAAA	-14	NA	138148870	138161077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
Isoform_4934_25	chr11	-	1266	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-1	2366	-1	-2366	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCCTCTAATGCTTTTT	1335	False	NA	-3	True	GATAAA	-19	NA	20062914	20014669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
Isoform_49349_15	chr3	+	2757	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	859	-2195	-1	1380	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAAACTTTGAGTAG	NA	False	NA	NA	False	CATAAA	-13	NA	138233044	138263355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_49350_53	chr3	+	2072	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	859	-1510	-1	695	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGGTCAATTGTTG	NA	False	NA	12	True	AATAAA	-27	NA	138233044	138262670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_49353_186	chr3	+	1620	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	859	-1058	-1	243	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTAGATTTGTCCTTT	NA	False	NA	24	True	AATAAA	-25	NA	138233044	138262218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_49355_8	chr3	+	2365	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	837	-1781	-23	966	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACGGAATTAATAGCAT	NA	False	NA	10	True	TATAAA	-3	NA	138233022	138262941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
Isoform_49365_87	chr3	+	3118	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	56	3479	-54	0	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4881	False	NA	19	True	AATAAA	-32	NA	138448011	138610187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_49366_7	chr3	+	2403	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	20	4230	20	1	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTGCATGTGCTCGCT	4845	False	NA	NA	False	AATAAA	-13	NA	138447975	138609436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_49370_40	chr3	+	3061	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	-57	-4	53	4	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCACGTCGTCTTACTTT	4878	False	NA	23	True	AATAAA	-36	NA	138448008	138610191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
Isoform_49372_12	chr3	+	2292	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	-19	-385	-19	385	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAACTGTCTTCTGGCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	142406792	142450673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49373_14	chr3	+	1905	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	-13	-4	-13	4	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCATCTGCAGCTCGTC	NA	False	NA	NA	False	NA	NA	NA	142406798	142450292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49374_42	chr3	+	1697	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	1	190	1	1	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTGTTGTACTTT	NA	False	NA	22	True	AATACA	-36	NA	142406812	142450098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49375_4	chr3	+	1693	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-20	2533	9	1	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTGTTGTACTTT	NA	False	NA	22	True	AATACA	-36	NA	142406820	142450098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49376_3	chr3	+	1877	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-12	2341	-12	2	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCTCATCTGCAGCTCG	NA	False	NA	NA	False	NA	NA	NA	142406828	142450290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49377_3	chr3	+	1583	13	NIC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	27.8910330074421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTGTTGTACTTT	NA	False	NA	22	True	AATACA	-36	NA	142406823	142450098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_142406937_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
Isoform_49378_136	chr3	+	1266	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	181	8	3	-8	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTTTTTGTTATA	NA	False	NA	0	True	AATAAA	-7	NA	142470986	142489359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
Isoform_49379_24	chr3	+	1323	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	124	8	-54	-8	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTTTTTGTTATA	NA	False	NA	0	True	AATAAA	-7	NA	142470929	142489359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
Isoform_4938_5	chr11	-	498	2	NNC	ENSMUSG00000085035.2	novel	627	2	NA	NA	-7432	188	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTCTTGGCCTCCATT	9124	False	NA	NA	False	NA	NA	NA	20103776	20095378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_20095695_20103594
Isoform_49380_1044	chr3	+	1221	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	5	0	-5	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTCTGCTTTGTCCTT	NA	False	NA	23	True	AATAAA	-25	NA	144276474	144303436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
Isoform_49381_45	chr3	+	1490	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	19	5	19	-5	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTCTGCTTTGTCCTT	NA	False	NA	23	True	AATAAA	-25	NA	144276205	144303436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
Isoform_49386_37	chr3	+	1127	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	1	-1	1	1	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281960	145309869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_49387_98	chr3	+	1097	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	31	-1	4	1	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281990	145309869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_49388_4	chr3	+	1689	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	31	-593	4	-89	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTGCTTTCCTCT	NA	False	NA	NA	False	TATAAA	-18	NA	145281990	145310461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_4939_7	chr11	-	436	2	NNC	ENSMUSG00000085035.2	novel	627	2	NA	NA	-7370	188	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTCTTGGCCTCCATT	9186	False	NA	NA	False	NA	NA	NA	20103714	20095378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_20095695_20103594
Isoform_49390_7	chr3	+	1231	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	227.48013100049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTGCATGTTACTGC	NA	False	NA	48	True	ATTAAA	-22	NA	145281979	145309867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_145282174_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_49392_18	chr3	+	1654	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	4	681	4	1	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCATGTTACTGCCT	NA	False	NA	50	True	ATTAAA	-24	NA	145281990	145309869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
Isoform_49393_24	chr3	+	3712	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	52	0	52	0	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTAGTGTCTGTCTCGT	NA	False	NA	9	True	AATAAA	-18	NA	145464481	145600032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_49394_35	chr3	+	2741	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	13	1010	13	1	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGTTGCCTTTGGGGG	NA	False	NA	14	True	AATAAA	-19	NA	145464442	145599022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_49395_60	chr3	+	2702	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	52	1010	52	1	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGTTGCCTTTGGGGG	NA	False	NA	14	True	AATAAA	-19	NA	145464481	145599022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
Isoform_49404_11	chr3	+	1925	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	44	-20	44	20	multi-exon	FALSE	canonical	3	334	junction_2	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGGTTGTACATGT	NA	False	NA	107	True	AATATA	-29	NA	145630060	145640131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_49405_249	chr3	+	1851	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	24	74	24	-74	multi-exon	FALSE	canonical	3	334	junction_2	11.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATGTGTCTGAGTCAG	NA	False	NA	13	True	NA	NA	NA	145630040	145640037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_49407_13	chr3	+	1889	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	-14	74	-14	-74	multi-exon	FALSE	canonical	3	334	junction_2	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATGTGTCTGAGTCAG	NA	False	NA	13	True	NA	NA	NA	145630002	145640037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145630271_145636160_145636450_145638705
Isoform_49408_4	chr3	+	1712	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-177	-1021	-1	2	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAGCATCTTGTTTAT	NA	False	NA	7	True	ATTAAA	-21	NA	145643767	145650586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
Isoform_49409_9	chr3	+	1120	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-140	-466	8	34	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643804	145650031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
Isoform_4941_5	chr11	-	2573	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-12	2243	-1	-2243	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAATTATGTGGCTTTA	3043	False	NA	-62	True	NA	NA	NA	20199430	20179279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_49410_16	chr3	+	1645	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	-2	1	-2	-1	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAACTTAGCATCTTG	NA	False	NA	2	True	ATTAAA	-16	NA	145643794	145650581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
Isoform_49411_44	chr3	+	1085	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	8	551	8	34	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643804	145650031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
Isoform_49412_37	chr3	+	1011	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-253	-34	-10	34	multi-exon	FALSE	canonical	3	74	junction_2	94.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643786	145650031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644652_145644852_145649516
Isoform_49413_11	chr3	+	1565	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-250	-591	-7	4	multi-exon	FALSE	canonical	3	74	junction_2	94.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCATCTTGTTTATTT	NA	False	NA	9	True	ATTAAA	-23	NA	145643789	145650588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644652_145644852_145649516
Isoform_49415_106	chr3	+	958	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	36	553	8	34	multi-exon	FALSE	canonical	3	242	junction_2	10.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTATTACTGAATGC	NA	False	NA	24	True	AATAAA	-14	NA	145643804	145650031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644652_145644852_145649551
Isoform_49417_26	chr3	+	1528	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	18	1	-10	1	multi-exon	FALSE	canonical	3	242	junction_2	10.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTAGCATCTTGTT	NA	False	NA	4	True	ATTAAA	-18	NA	145643786	145650583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145644084_145644652_145644852_145649551
Isoform_49418_4	chr3	+	2004	3	ISM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	94	20245	94	2836	5prime_fragment	FALSE	canonical	3	28	junction_1	25.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAGGTTGCCAGAA	NA	False	NA	NA	False	AATAAA	-33	NA	145693718	145707230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_145694925_145704220_145704866_145707077
Isoform_49419_3	chr3	+	3031	13	NIC	ENSMUSG00000036853.6	novel	2991	12	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.08166599946613	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGGAAGACTCTTGACA	NA	False	NA	NA	False	NA	NA	NA	145823231	145847562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_145823390_145827545_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145843325_145845125_145845333_145846218
Isoform_4942_24	chr11	-	2560	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	47	2197	12	-2197	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTCTCGTGTTTAAAA	3102	False	NA	-16	True	GATAAA	-12	NA	20199371	20179233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_49421_7	chr3	+	2212	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	0	1234	0	4	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGCTCAGAGTTGTTT	NA	False	NA	NA	False	CATAAA	-16	NA	146110396	146144665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
Isoform_49422_6	chr3	+	2109	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	5	778	-3	-700	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTTCTTGTTTCCTTT	5959	False	NA	NA	False	AATAAA	-12	NA	146156229	146170826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
Isoform_49423_3	chr3	+	2743	6	NIC	ENSMUSG00000028189.13	novel	2892	7	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	10.6320270880016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACAGTGACTTATTT	5959	False	NA	NA	False	AATAAA	-10	NA	146156229	146171599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_146156386_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
Isoform_49424_967	chr3	+	495	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	70	28	-13	-3	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCCTCCTTACTG	NA	False	NA	-2	True	AATAAA	-11	NA	146205631	146211299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_146205776_146209014_146209155_146211088
Isoform_49425_343	chr3	+	519	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	46	28	-37	-3	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCCTCCTTACTG	NA	False	NA	-2	True	AATAAA	-11	NA	146205607	146211299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_146205776_146209014_146209155_146211088
Isoform_49426_14	chr3	+	615	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	-50	28	-50	-3	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCCTCCTTACTG	NA	False	NA	-2	True	AATAAA	-11	NA	146205511	146211299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_146205776_146209014_146209155_146211088
Isoform_49431_7	chr3	+	2506	21	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	463.709486100942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916087	151938409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_49433_6	chr3	+	2464	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916116	151938408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_49434_9	chr3	+	2474	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	449.059002248034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_49436_8	chr3	+	2452	16	ISM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	-6	8636	3	2	5prime_fragment	FALSE	canonical	1	416	junction_13	308.851175955166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGAGAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	151916112	151929773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922
Isoform_49437_45	chr3	+	2405	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_49439_72	chr3	+	2414	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-39	-1	-2	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_49440_7	chr3	+	2672	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-39	-259	-2	241	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGTATACTTCCATTG	NA	False	NA	26	True	ATTAAA	-22	NA	151916116	151938667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_49445_11	chr3	+	2445	16	FSM	ENSMUSG00000028034.16	ENSMUST00000198227.5	3163	16	-12	730	-2	2	multi-exon	FALSE	canonical	1	416	junction_13	270.598809227897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGAGAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	151916116	151929773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922
Isoform_49446_67	chr3	+	2401	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916116	151938408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_49448_7	chr3	+	2656	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	237	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTTTAGTATACTTCC	NA	False	NA	22	True	ATTAAA	-18	NA	151916116	151938663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
Isoform_49449_96	chr3	+	2411	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	58	4054	-2	0	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_4945_4	chr11	-	5141	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	12	-349	12	349	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTTAATATTTTAT	3067	False	NA	NA	False	AATAAA	-19	NA	20199406	20176687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_49451_7	chr3	+	2663	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	58	3802	-2	235	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGATCTTTAGTATACTT	NA	False	NA	20	True	ATTAAA	-16	NA	151916116	151938661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
Isoform_49456_89	chr3	+	3887	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	13	283	-10	1	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052138	152098971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
Isoform_49458_97	chr3	+	3884	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	3	-1	3	1	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052117	152098971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
Isoform_4946_89	chr11	-	2168	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	3	0	3	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3058	False	NA	-8	True	AATAAA	-17	NA	20199415	20188385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_49463_3	chr3	+	4343	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-7	3271	-7	3	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTTTTTCATCTGTA	NA	False	NA	98	True	GATAAA	-20	NA	152101632	152165192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_49464_23	chr3	+	4265	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-7	3349	-7	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101632	152165114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_49465_12	chr3	+	4193	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-5	3351	5	1	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102325	152165112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
Isoform_49467_74	chr3	+	1555	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	6	3176	0	2	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGTGTGTGCTGTCTT	3963	False	NA	35	True	AGTAAA	-39	NA	152419742	152491487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
Isoform_4947_5	chr11	-	2776	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-24	-581	-13	581	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	3031	False	NA	NA	False	NA	NA	NA	20199442	20187804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
Isoform_49470_157	chr3	+	1990	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	516	-1	5	1	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTTGTCTGTCTCGTGT	NA	False	NA	17	True	AGTAAA	-17	NA	154302863	154328818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_49471_9	chr3	+	1935	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	480	90	-6	-90	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAAGTTCACAAATT	NA	False	NA	-74	True	NA	NA	NA	154302827	154328727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_49472_3	chr3	+	1087	9	NNC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	5	1967	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	62.7928140793196	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTGGCCACATTGGTA	NA	False	NA	NA	False	TATAAA	-11	NA	154302863	154330786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154330604
Isoform_49473_5	chr3	+	2269	9	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	57.5769865050265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGTCTGTCTCGTG	NA	False	NA	16	True	AGTAAA	-16	NA	154302826	154328817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_154303165_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
Isoform_4948_104	chr11	-	2782	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	7	-1	-4	0	multi-exon	FALSE	canonical	3	111	junction_1	11	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3051	False	NA	-8	True	AATAAA	-17	NA	20199422	20188385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20190699_20191885_20192239_20199306
Isoform_49481_9	chr3	+	2707	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-7	37	5	3	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157240017	157253976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
Isoform_49483_11	chr3	+	2711	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	197	16	-2	-16	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAACTCATAATAGCTT	NA	False	NA	21	True	AATAAA	-29	NA	157239993	157254031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_49484_139	chr3	+	2613	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	240	71	12	3	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157240036	157253976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_49486_32	chr3	+	2893	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-40	71	-40	3	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157239756	157253976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_49488_5	chr3	+	2953	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-52	23	-52	11	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTTCTAAACTCATA	NA	False	NA	14	True	AATAAA	-22	NA	157239744	157254024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
Isoform_49489_12	chr3	+	4078	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-182	7	-7	-7	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCATGATGTGCCTA	NA	False	NA	8	True	AATAAA	-16	NA	157652868	157713664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
Isoform_4949_4	chr11	-	3325	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	45	-582	-1	581	multi-exon	FALSE	canonical	3	111	junction_1	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	3089	False	NA	NA	False	NA	NA	NA	20199384	20187804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20190699_20191885_20192239_20199306
Isoform_49492_10	chr3	+	4302	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-408	9	-233	-9	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTTCATGATGTGCC	NA	False	NA	6	True	AATAAA	-14	NA	157652642	157713662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
Isoform_49497_370	chr3	+	2704	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	41	1397	1	1	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742339	157772727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_495_374	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
Isoform_4950_66	chr11	-	3942	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	26	-42	-1	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTAACGTGTTTTT	7719	False	NA	-6	True	NA	NA	NA	20282755	20252205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
Isoform_49505_60	chr3	+	2629	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	146	junction_2	190.962278254048	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742339	157772726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_49507_28	chr3	+	2447	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	3	0	1	0	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742339	157772726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
Isoform_49509_13	chr3	+	3303	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	17	3	-1	-3	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTATTTTTTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	159201086	159235589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
Isoform_4951_231	chr11	-	3891	8	FSM	ENSMUSG00000020142.13	ENSMUST00000004634.7	3872	8	-20	1	9	-1	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTAACGTGTTTTT	7770	False	NA	-6	True	NA	NA	NA	20282704	20252205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
Isoform_49511_8	chr3	+	2478	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-12	-495	-5	-1	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTATTTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	159201082	159235591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
Isoform_49513_9	chr3	+	2574	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	39	946	-26	174	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGCTTAAAATGTGT	NA	False	NA	19	True	ATTAAA	-30	NA	159545347	159640713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
Isoform_49514_4	chr3	+	2685	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	23	851	23	269	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCCTTCCTGTCCCAAC	NA	False	NA	114	True	AATAAA	-15	NA	159545331	159640808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
Isoform_49515_6	chr3	+	2082	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	-31	-1	-31	1	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTATTTCCGTTTATT	NA	False	NA	NA	False	NA	NA	NA	159545342	159644301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
Isoform_49516_307	chr3	+	2228	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	1	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655337	116697128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_49519_10	chr3	+	2660	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	433	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAACTAAACACGT	NA	False	NA	NA	False	AGTAAA	-8	NA	116655337	116697560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_49520_12	chr3	+	2777	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1573	1	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116654788	116697128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_49524_49	chr3	+	2139	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655337	116697128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
Isoform_49528_5	chr3	+	3151	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	13	junction_1	88.4969214378091	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACTGCTGATTGTC	8586	False	NA	7	True	AGTAAA	-13	NA	88522641	88554234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_49529_14	chr3	+	3161	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-32	2	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	8586	False	NA	11	True	AGTAAA	-17	NA	88522641	88554238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_49530_9	chr3	+	4265	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-16	1	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAAATGAAGCGCCG	8602	False	NA	14	True	ATTAAA	-16	NA	88522657	88555358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
Isoform_49534_6	chr3	+	3173	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	127.784767267316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
Isoform_49536_8	chr3	+	2424	16	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACAGTATAAGTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	144824331	144859653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
Isoform_49537_4	chr3	+	3913	23	NNC	ENSMUSG00000039234.12	novel	3649	20	NA	NA	-2639	2	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	16.1403964230813	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTTTATGTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	123058464	123159292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_123058555_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
Isoform_49538_9	chr3	+	414	2	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	123058447	123059548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_123058555_123059241
Isoform_49540_3	chr3	+	2299	3	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	116	-45505	intron_retention	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCCAAGTTTGACT	NA	False	NA	NA	False	AATACA	-35	NA	88858044	88890070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_88858296_88873118_88873636_88888539
Isoform_49541_8	chr3	+	2043	11	NNC	ENSMUSG00000015714.12	novel	1524	6	NA	NA	147	-36	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	136.729989395158	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGACTGTGTCA	4648	False	NA	9	True	ATTAAA	-16	NA	95222724	95230874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_95222850_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
Isoform_49542_10	chr3	+	1118	2	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34818272	34820313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_34818433_34819355
Isoform_49544_6	chr3	+	1220	4	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	11	8205	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	71.1243043316887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTGATAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88742571	88761927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908
Isoform_49545_9	chr3	+	2818	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1492	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	170.332579091611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	171	False	NA	21	True	AATAAA	-11	NA	95138105	95143720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_95138253_95139095_95139404_95139859_95139971_95140798_95140891_95141560
Isoform_49547_7	chr3	+	808	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10812	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTGTGGGAAGAATGA	NA	False	NA	6	True	NA	NA	NA	30712846	30726581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_30713166_30714049_30714247_30726289
Isoform_49548_3	chr3	+	3020	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	84	318	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	124.664366008291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTAACGAGGCCTATCA	NA	False	NA	14	True	ATTAAA	-11	NA	32583771	32631820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_32584029_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
Isoform_49549_3	chr3	+	1851	9	Fusion	ENSMUSG00000056411.3_ENSMUSG00000009108.16	novel	2518	7	NA	NA	812	0	multi-exon	FALSE	canonical	2	2	junction_7	1.61535599791501	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTGGGTTCCCTGTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	107994103	108008746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr3_+_107994208_108000509_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
Isoform_49554_4	chr3	+	776	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-762	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	161.470327511486	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGATGCTTATTTATT	NA	False	NA	9	True	AATAAA	-14	NA	90420979	90431882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_90421081_90422067_90422327_90423156_90423350_90431659
Isoform_49557_3	chr3	+	3144	12	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	276	-72	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	47.973132976733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCACTGACAACTTGAA	NA	False	NA	12	True	NA	NA	NA	135228971	135277093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_135229432_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
Isoform_49559_4	chr3	-	173	1	Antisense	novelGene_ENSMUSG00000008958.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1348	False	NA	NA	False	NA	NA	NA	95024008	95023835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_-_95023800_95024000
Isoform_49560_6	chr3	-	176	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	8525	False	NA	NA	False	NA	NA	NA	95028192	95028016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_95028000_95028200
Isoform_49561_10	chr3	-	168	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95120650	95120482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_95120500_95120600
Isoform_49562_45	chr3	+	1429	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	15685327	15686756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_15685300_15686800
Isoform_49564_10	chr3	+	175	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95259144	95259319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_95259100_95259300
Isoform_49566_7	chr3	+	2642	1	FSM	ENSMUSG00000038619.13	ENSMUST00000199421.2	998	1	8	-1652	8	108	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTAACACAGA	390	False	NA	NA	False	NA	NA	NA	95532311	95534953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_95532300_95535000
Isoform_49572_6	chr3	+	178	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95730868	95731046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_95730900_95731000
Isoform_49574_5	chr3	-	1595	1	NIC	ENSMUSG00000054312.7	novel	488	3	NA	NA	36	-7005	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95778795	95777200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_95777200_95778800
Isoform_49575_21	chr3	+	204	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	95781326	95781530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_95781300_95781500
Isoform_49576_5	chr3	+	173	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	NA	False	NA	NA	False	NA	NA	NA	95832229	95832402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_95832200_95832400
Isoform_49579_11	chr1	-	191	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGTACAATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	192892576	192892385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_192892400_192892600
Isoform_49580_4	chr3	-	1556	1	Genic_Genomic	ENSMUSG00000097204.3	novel	NA	NA	NA	NA	-15	499	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCGGCTATTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	96079747	96078191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_96078200_96079700
Isoform_49581_8	chr3	-	794	1	NIC	ENSMUSG00000015943.12	novel	995	4	NA	NA	-5	65	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATTCCTTGATTTGTA	NA	False	NA	-5	True	AATAAA	-17	NA	96104907	96104113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_96104100_96104900
Isoform_49582_31	chr3	-	456	1	FSM	ENSMUSG00000068855.4	ENSMUST00000090782.4	520	1	-13	77	-13	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTTTTTAGAGCC	NA	False	NA	-23	True	NA	NA	NA	96128209	96127753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96127800_96128200
Isoform_49583_9	chr3	+	544	1	FSM	ENSMUSG00000064220.7	ENSMUST00000078756.7	586	1	41	1	41	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGTCTTGGTGGCCTTT	NA	False	NA	NA	False	GATAAA	-16	NA	96152853	96153397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96152900_96153400
Isoform_49585_10	chr3	+	476	1	FSM	ENSMUSG00000074403.3	ENSMUST00000098843.3	488	1	26	-14	26	14	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCGATGAAAGTAGCT	2006	False	NA	NA	False	NA	NA	NA	96175995	96176471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96176000_96176500
Isoform_49587_27	chr3	+	178	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9070	False	NA	NA	False	NA	NA	NA	96230231	96230409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_96230200_96230400
Isoform_49588_19	chr3	+	212	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAATGGAATCTACCTAA	1788	False	NA	NA	False	NA	NA	NA	96249640	96249852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_96249600_96249900
Isoform_49589_4	chr3	+	343	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTAAGTGGCCTC	NA	False	NA	NA	False	NA	NA	NA	96312622	96312965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_96312600_96313000
Isoform_49590_7	chr3	-	401	1	FSM	ENSMUSG00000118406.2	ENSMUST00000238714.2	397	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGCTGGGGAAATGCCC	NA	False	NA	NA	False	NA	NA	NA	96322149	96321748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96321700_96322100
Isoform_49591_13	chr3	-	378	1	FSM	ENSMUSG00000118677.1	ENSMUST00000240510.1	166	1	0	-212	0	212	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	96367505	96367127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_96367100_96367500
Isoform_49592_20	chr3	+	377	1	FSM	ENSMUSG00000119774.1	ENSMUST00000083839.3	166	1	0	-211	0	211	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	ATTAAA	-45	NA	96357761	96358138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_96357800_96358100
Isoform_49593_4	chr3	-	206	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGGATAGATGGTAGAAT	NA	False	NA	2	True	NA	NA	NA	96442613	96442407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_96442400_96442600
Isoform_49598_3	chr3	+	203	1	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAGAAAAAG	9470	False	NA	NA	False	NA	NA	NA	96498195	96498398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_96498200_96498400
Isoform_49599_3	chr3	+	175	1	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTTAATAGC	NA	False	NA	NA	False	NA	NA	NA	96593601	96593776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_96593600_96593800
Isoform_49602_6	chr3	-	176	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	96746410	96746234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_96746200_96746400
Isoform_49603_22	chr3	+	1951	1	FSM	ENSMUSG00000028093.16	ENSMUST00000199346.2	1300	1	-288	-363	31	363	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97066123	97068074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_97066100_97068100
Isoform_49606_5	chr3	-	178	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8006	False	NA	NA	False	NA	NA	NA	19257096	19256918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_19256900_19257100
Isoform_49607_18	chr3	-	2586	1	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	-12	-18665	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97675259	97672673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_97672700_97675300
Isoform_49608_10	chr3	-	2660	1	Genic_Genomic	ENSMUSG00000038170.16	novel	NA	NA	NA	NA	-8	-18665	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97675333	97672673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_97672700_97675300
Isoform_49609_3	chr3	-	180	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGGTGAACTTC	NA	False	NA	-7	True	NA	NA	NA	97957571	97957391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_97957400_97957600
Isoform_49612_5	chr15	-	176	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAATTTG	NA	False	NA	NA	False	NA	NA	NA	39162776	39162600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_39162600_39162800
Isoform_49614_3	chr3	+	2454	1	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	6	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAGAAAAA	258	False	NA	NA	False	NA	NA	NA	101284404	101286858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_101284400_101286900
Isoform_49615_3	chr3	+	1738	1	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	83510	729	82255	-729	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	TTTAAA	-18	NA	101367908	101369646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_101367900_101369600
Isoform_49616_15	chr3	-	2603	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102060382	102057779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_102057800_102060400
Isoform_49617_6	chr3	-	177	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102953789	102953612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_102953600_102953800
Isoform_49622_5	chr3	-	329	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAGAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	102994142	102993813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_102993800_102994100
Isoform_49624_3	chr3	+	2897	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19868188	19871085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_19868200_19871100
Isoform_49625_8	chr3	-	206	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAAAGACTCA	NA	False	NA	NA	False	NA	NA	NA	103193733	103193527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_103193500_103193700
Isoform_49627_14	chr3	+	1100	1	FSM	ENSMUSG00000048106.7	ENSMUST00000059704.6	1028	1	-118	46	-22	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCATTCCAG	NA	False	NA	NA	False	AATAAA	-12	NA	19949027	19950127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_19949000_19950100
Isoform_49628_11	chr3	-	185	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACTTAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	104035142	104034957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_104035000_104035100
Isoform_4963_17	chr11	-	3267	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	74	657	-60	1	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAAAATGAAA	9334	False	NA	NA	False	AATACA	-30	NA	20691515	20635740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
Isoform_49631_3	chr3	+	1969	1	FSM	ENSMUSG00000045576.17	ENSMUST00000199186.2	2455	1	485	1	-13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTCATTTATTTTTC	67	False	NA	NA	False	ATTAAA	-13	NA	104771805	104773774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_104771800_104773800
Isoform_49632_3	chr3	-	175	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	6552	False	NA	NA	False	NA	NA	NA	104774442	104774267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_104774300_104774400
Isoform_49633_6	chr3	+	175	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	105518026	105518201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_105518000_105518200
Isoform_49637_21	chr3	+	370	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	26	33	26	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105942005	105942375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_105942000_105942400
Isoform_49638_8	chr3	+	3193	1	NIC	ENSMUSG00000087260.6	novel	881	4	NA	NA	6	-1882	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAACAGTAAAAACA	3157	False	NA	NA	False	ATTAAA	-30	NA	107186320	107189513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_107186300_107189500
Isoform_49639_4	chr3	-	4030	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	39	1898	39	-1898	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATAAGGGCTTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	107240378	107236348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_107236300_107240400
Isoform_4964_10	chr11	-	3951	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	40	7	40	-7	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTAGCCTTTTGT	9300	False	NA	NA	False	AATAAA	-9	NA	20691549	20635090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
Isoform_49640_7	chr3	-	212	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	107254866	107254654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_107254700_107254900
Isoform_49641_19	chr3	-	2396	1	Genic_Genomic	ENSMUSG00000014601.14	novel	NA	NA	NA	NA	-3	-8850	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGTCTTA	NA	False	NA	NA	False	AATATA	-26	NA	107539013	107536617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_107536600_107539000
Isoform_49644_3	chr3	+	801	2	NNC	ENSMUSG00000048100.14	novel	463	2	NA	NA	1	-765	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108479015	108479855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_+_108479618_108479656
Isoform_49645_30	chr3	-	2546	1	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-5	-2606	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTATAAAGTA	6862	False	NA	NA	False	NA	NA	NA	108819031	108816485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_108816500_108819000
Isoform_49647_34	chr3	-	2438	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	8	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAATTTGCTGGGGCTC	NA	False	NA	-16	True	ATTAAA	-15	NA	110158306	110155868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_110155900_110158300
Isoform_49648_74	chr3	-	2180	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	8	262	3	-262	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGGTCTTTAGACGTTT	NA	False	NA	-12	True	AATAAA	-22	NA	110158306	110156126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_110156100_110158300
Isoform_49653_4	chr3	+	834	1	Antisense	novelGene_ENSMUSG00000027981.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGATGTAAGTTCTC	NA	False	NA	NA	False	AGTAAA	-26	NA	113423503	113424337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_+_113423500_113424300
Isoform_49654_6	chr3	-	956	1	FSM	ENSMUSG00000054426.12	ENSMUST00000067500.6	309	1	33	-680	0	680	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAGAAAAG	941	False	NA	NA	False	NA	NA	NA	115681746	115680790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_115680800_115681700
Isoform_49655_8	chr3	-	916	1	FSM	ENSMUSG00000034437.9	ENSMUST00000075650.7	492	1	-116	-308	-116	308	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	116355191	116354275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116354300_116355200
Isoform_49659_3	chr3	+	185	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	116373874	116374059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_116373900_116374100
Isoform_4966_3	chr11	-	3684	4	FSM	ENSMUSG00000042363.15	ENSMUST00000144441.8	913	4	0	-2771	0	-3	multi-exon	FALSE	canonical	3	309	junction_3	21.6384431561566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20780755	20773578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275
Isoform_49660_8	chr3	-	716	1	FSM	ENSMUSG00000033439.13	ENSMUST00000198454.2	880	1	-24	188	-2	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116388511	116387795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_116387800_116388500
Isoform_49661_7	chr3	-	179	1	ISM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	67562	427	40646	-427	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATTTGAGGACT	NA	False	NA	NA	False	NA	NA	NA	116534253	116534074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_-_116534100_116534300
Isoform_49663_6	chr3	+	170	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	119673629	119673799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_119673600_119673800
Isoform_49664_3	chr3	-	2524	1	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAGAAAAAAAAAAAACAAA	NA	False	NA	NA	False	GGGGCT	-41	NA	120965343	120962819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_120962800_120965300
Isoform_49666_4	chr3	+	185	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATACATCT	NA	False	NA	NA	False	NA	NA	NA	121178273	121178458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_121178300_121178500
Isoform_4967_4	chr11	-	3424	5	NIC	ENSMUSG00000042363.15	novel	3362	5	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	144.260831482423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTCTGGGTTATTACA	NA	False	NA	-4	True	AATAAA	-16	NA	20781015	20773576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780869
Isoform_49672_3	chr3	-	2001	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	121353186	121351185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_121351200_121353200
Isoform_49674_4	chr3	+	3117	1	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	32	-8266	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAAAGCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122039237	122042354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_122039200_122042400
Isoform_49675_4	chr3	+	3014	1	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	-20	-8266	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAAAGCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122039340	122042354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_122039300_122042400
Isoform_49676_33	chr3	+	698	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	-4	-202	-4	202	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	5891	False	NA	NA	False	NA	NA	NA	122050372	122051070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_122050400_122051100
Isoform_4968_219	chr11	-	3327	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	32	3	-2	-3	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20781024	20773578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_49681_8	chr3	-	186	1	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122184584	122184398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_122184400_122184600
Isoform_49682_4	chr3	-	3213	2	NNC	ENSMUSG00000106365.2	novel	396	2	NA	NA	-96	686	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAAGAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	122423408	122420173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr3_-_122422872_122422893
Isoform_49684_8	chr3	+	481	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGGGGCACAGA	NA	False	NA	NA	False	AATAAA	-24	NA	5815865	5816346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_5815900_5816300
Isoform_49686_5	chr3	-	1009	1	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	7	-15848	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122778146	122777137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_122777100_122778100
Isoform_49688_3	chr3	+	440	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAGGAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	122778359	122778799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_122778400_122778800
Isoform_49689_7	chr6	-	184	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAGCTCA	NA	False	NA	NA	False	NA	NA	NA	67132149	67131965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_67132000_67132100
Isoform_49691_3	chr3	-	779	1	FSM	ENSMUSG00000104960.2	ENSMUST00000198509.2	776	1	-6	3	-3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGACTGTGTCCTGTT	NA	False	NA	42	True	AATAAA	-15	NA	123301985	123301206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_123301200_123302000
Isoform_49692_3	chr3	+	1774	1	FSM	ENSMUSG00000044528.6	ENSMUST00000058994.6	3889	1	220	1895	220	-1895	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGATGACATGTGTGGT	NA	False	NA	NA	False	ATTAAA	-13	NA	124114723	124116497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_124114700_124116500
Isoform_49693_4	chr3	+	385	2	Genic_Genomic	ENSMUSG00000096544.3	novel	331	1	NA	NA	-158	7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAAATAACCTTACG	NA	False	NA	NA	False	NA	NA	NA	124179157	124179653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_+_124179178_124179288
Isoform_49699_1100	chr3	-	1968	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-126	-252	-126	252	mono-exon	FALSE	NA	NA	NA	NA	NA	1100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	25266895	25264927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_25264900_25266900
Isoform_4970_14	chr11	-	3548	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-189	3	-189	-3	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTTCTGGGTTATTA	NA	False	NA	-6	True	AATAAA	-14	NA	20781245	20773578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_49704_3	chr3	+	175	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATTCAGGATT	NA	False	NA	NA	False	NA	NA	NA	126664060	126664235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_126664100_126664200
Isoform_49705_19	chr3	+	844	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATCCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25785927	25786771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_25785900_25786800
Isoform_49706_3	chr1	-	179	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93451914	93451735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_93451700_93451900
Isoform_49707_3	chr3	-	176	1	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGATTAG	NA	False	NA	NA	False	NA	NA	NA	127722722	127722546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_127722500_127722700
Isoform_49708_33	chr3	-	177	1	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	144662764	144662587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_144662600_144662800
Isoform_49710_3	chr3	+	765	1	ISM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	105343	2	85349	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTCTAGTTCTTTGT	NA	False	NA	15	True	AATAAA	-23	NA	129431377	129432142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_129431400_129432100
Isoform_49712_3	chr3	+	180	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	130529147	130529327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_130529100_130529300
Isoform_49713_5	chr3	-	188	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	130992205	130992017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_130992000_130992200
Isoform_4972_6	chr11	-	3583	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-2	-219	-2	219	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTGCATGCCCTGAC	NA	False	NA	NA	False	AATAAA	-11	NA	20781058	20773356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
Isoform_49721_31	chr3	-	781	1	Genic_Genomic	ENSMUSG00000028018.16	novel	NA	NA	NA	NA	-7	-9627	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132797593	132796812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_132796800_132797600
Isoform_49722_5	chr3	-	2804	1	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	0	-2737	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133250063	133247259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_133247300_133250100
Isoform_49723_3	chr3	+	960	1	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	43	-33106	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAGAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	134918340	134919300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_134918300_134919300
Isoform_49724_17	chr3	-	800	1	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-8	-7009	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGTTTATTTAA	1852	False	NA	NA	False	NA	NA	NA	27207985	27207185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_27207200_27208000
Isoform_49725_5	chr3	+	916	1	Antisense	novelGene_ENSMUSG00000028165.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	135128941	135129857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_+_135128900_135129900
Isoform_49731_4	chr3	-	175	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAACCAGG	NA	False	NA	NA	False	NA	NA	NA	137581674	137581499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_137581500_137581700
Isoform_49732_3	chr3	+	829	1	NIC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	20	-4045	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAATAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	137849249	137850078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_137849200_137850100
Isoform_49733_4	chr3	+	452	1	NIC	ENSMUSG00000004127.13	novel	567	4	NA	NA	6	-4044	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAATAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	137849627	137850079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_137849600_137850100
Isoform_49734_10	chr3	+	177	1	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	6048487	6048664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_6048500_6048700
Isoform_49735_34	chr3	-	1613	1	FSM	ENSMUSG00000047674.3	ENSMUST00000057860.3	2352	1	530	209	530	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTAGATTTTTGATT	NA	False	NA	-3	True	AATAAA	-13	NA	140917586	140915973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_140916000_140917600
Isoform_49737_21	chr3	-	175	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTTAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	142466756	142466581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_142466600_142466800
Isoform_49738_7	chr3	-	518	1	Genic_Genomic	ENSMUSG00000028266.18	novel	NA	NA	NA	NA	-301	-3381	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-31	NA	143911282	143910764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_143910800_143911300
Isoform_49739_3	chr3	-	2322	1	FSM	ENSMUSG00000040151.10	ENSMUST00000199680.2	2321	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144275919	144273597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_144273600_144275900
Isoform_49741_35	chr3	-	177	1	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTATCT	NA	False	NA	NA	False	NA	NA	NA	129370830	129370653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_129370700_129370800
Isoform_49742_4	chr3	-	1937	1	NIC	ENSMUSG00000028195.5	novel	2019	5	NA	NA	6	-1063	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	145355730	145353793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_145353800_145355700
Isoform_49747_12	chr12	+	180	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	75663420	75663600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_75663400_75663600
Isoform_49748_3	chr3	-	178	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	6891	False	NA	NA	False	NA	NA	NA	146147006	146146828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_146146800_146147000
Isoform_4975_18	chr11	-	2494	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-346	535	-346	0	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21320823	21271672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
Isoform_49755_14	chr3	-	2075	1	FSM	ENSMUSG00000028035.14	ENSMUST00000196291.2	4913	1	19	2819	-4	-2819	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	151915920	151913845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_151913800_151915900
Isoform_49759_6	chr3	+	194	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGTTGTAAGTGTGCAC	4336	False	NA	NA	False	NA	NA	NA	152925489	152925683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_152925500_152925700
Isoform_49760_3	chr3	-	692	1	NIC	ENSMUSG00000005493.16	novel	3325	20	NA	NA	213	-47961	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	153611562	153610870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_153610900_153611600
Isoform_49763_6	chr3	-	209	1	Antisense	novelGene_ENSMUSG00000028177.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTTAGGTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	157631384	157631175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_-_157631200_157631400
Isoform_49764_13	chr3	+	982	1	Genic_Genomic	ENSMUSG00000039988.15	novel	NA	NA	NA	NA	-263	-46787	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTTGCCTAATTTCCG	NA	False	NA	NA	False	NA	NA	NA	157652612	157653594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_+_157652600_157653600
Isoform_49768_16	chr3	-	632	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	-191	2029	-191	-2029	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157742237	157741605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_157741600_157742200
Isoform_49769_5	chr3	+	1200	1	NIC	ENSMUSG00000028173.11	novel	3559	12	NA	NA	19	-10384	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	159545327	159546527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_159545300_159546500
Isoform_49770_8	chr3	-	226	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGCAGAGAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	29040600	29040374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_29040400_29040600
Isoform_49771_20	chr3	+	194	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCCCCTTCCTTAGAT	NA	False	NA	3	True	NA	NA	NA	30676590	30676784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_30676600_30676800
Isoform_49772_5	chr3	-	2620	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	-96	-702	-21	702	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAGAAAGAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	30754013	30751393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_30751400_30754000
Isoform_49776_4	chr3	-	2820	1	Genic_Genomic	ENSMUSG00000037652.16	novel	NA	NA	NA	NA	-2	-8211	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31023566	31020746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_31020700_31023600
Isoform_49780_3	chr3	-	321	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACCAAATTCCAA	NA	False	NA	NA	False	NA	NA	NA	31111044	31110723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_31110700_31111000
Isoform_49781_4	chr3	-	1937	1	FSM	ENSMUSG00000027663.13	ENSMUST00000195055.2	3813	1	308	1568	-28	-1568	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	32419855	32417918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_32417900_32419900
Isoform_49782_5	chr3	+	2127	2	Antisense	novelGene_ENSMUSG00000027663.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATGAAAGAA	4546	False	NA	NA	False	NA	NA	NA	32419415	32421571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_+_32421233_32421261
Isoform_49784_13	chr3	+	681	1	FSM	ENSMUSG00000027677.18	ENSMUST00000199523.2	696	1	17	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	33854340	33855021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_33854300_33855000
Isoform_4979_226	chr11	-	2063	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-14	-5	-14	5	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	21321215	21271667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_49790_66	chr3	+	2464	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-409	2	-409	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGCCTGAGTCTTTCA	4198	False	NA	17	True	AATAAA	-22	NA	34704144	34706608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_34704100_34706600
Isoform_49792_6	chr3	+	2305	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-279	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATGCCTGAGTCTTTC	4328	False	NA	16	True	AATAAA	-21	NA	34704274	34706607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_+_34705639_34705666
Isoform_498_534	SIRV6	+	781	3	FSM	SIRV6A	SIRV615	783	3	2	0	2	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10239	11330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_10819_11031_11109_11205
Isoform_4980_14	chr11	-	2140	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-99	3	-99	-3	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTGCTGTCTAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	21321300	21271675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_4981_30	chr11	-	1811	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-38	271	-38	-4	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGCAGGTACTTTATT	NA	False	NA	-45	True	AATAAA	-19	NA	21321239	21271943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_49810_4	chr3	-	416	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34708153	34707737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_34707700_34708200
Isoform_49811_3	chr3	-	244	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAACAAATAAACAAAA	7958	False	NA	NA	False	NA	NA	NA	34750001	34749757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_34749800_34750000
Isoform_49812_3	chr3	+	703	1	FSM	ENSMUSG00000037400.18	ENSMUST00000200351.2	1906	1	22	1181	-6	-1181	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	35808276	35808979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_35808300_35809000
Isoform_49814_3	chr3	+	1678	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAAACAACAAA	8263	False	NA	NA	False	NA	NA	NA	37722971	37724649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_37723000_37724600
Isoform_4982_25	chr11	-	2610	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-36	-530	-36	-5	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGCCTTTTAAGTC	NA	False	NA	NA	False	AATATA	-13	NA	21321237	21271142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
Isoform_49820_16	chr8	-	176	1	Intergenic	novelGene_1923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	66227215	66227039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_66227000_66227200
Isoform_49821_15	chr3	-	807	1	NIC	ENSMUSG00000097639.3	novel	986	2	NA	NA	0	-3582	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAAAGAA	NA	False	NA	NA	False	TATAAA	-28	NA	41447627	41446820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_41446800_41447600
Isoform_49826_3	chr3	+	177	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACCTGTG	NA	False	NA	NA	False	NA	NA	NA	49395640	49395817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_49395600_49395800
Isoform_49827_22	chr3	+	174	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTC	NA	False	NA	NA	False	NA	NA	NA	51251817	51251991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_51251800_51252000
Isoform_49828_7	chr3	+	176	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGTTCCTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	51262579	51262755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_51262600_51262800
Isoform_49829_23	chr5	+	173	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86034791	86034964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_86034800_86035000
Isoform_49830_3	chr3	-	161	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	51305016	51304855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_51304900_51305000
Isoform_49831_3	chr3	+	176	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAGAAAAAAAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	51337755	51337931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_51337800_51337900
Isoform_49832_5	chr3	-	189	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	51342058	51341869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_51341900_51342100
Isoform_49833_4	chr3	+	177	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGCAATATTTTTTA	NA	False	NA	1	True	NA	NA	NA	51482742	51482919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_51482700_51482900
Isoform_49834_3	chr3	+	176	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	51509820	51509996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_51509800_51510000
Isoform_49837_4	chr3	+	1167	1	FSM	ENSMUSG00000049504.13	ENSMUST00000198186.2	940	1	-226	-1	-85	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53371001	53372168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_53371000_53372200
Isoform_4984_6	chr11	-	1772	8	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-6810	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21286702	21271672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
Isoform_49841_235	chr3	+	1510	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-23	1	-23	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	5417	False	NA	NA	False	NA	NA	NA	54388835	54390345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_54388800_54390300
Isoform_49845_52	chrX	+	645	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	811	-388	811	388	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTAGTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	79501158	79501803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79501200_79501800
Isoform_49848_4	chr3	-	3190	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	-59	-1443	-59	1443	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGAGACTTGTGCCCA	NA	False	NA	NA	False	AATAAA	-20	NA	54542048	54538858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_54538900_54542000
Isoform_49854_9	chr3	+	4197	1	FSM	ENSMUSG00000027806.10	ENSMUST00000199784.2	3022	1	-1174	-1	-11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58322124	58326321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_58322100_58326300
Isoform_49857_10	chr3	+	755	1	NIC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	30	-11392	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	58484086	58484841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_58484100_58484800
Isoform_49858_28	chr3	+	1821	1	ISM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	14673	4	14611	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACCCTGCTTTGTGAA	NA	False	NA	11	True	AATAAA	-14	NA	58498729	58500550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_58498700_58500600
Isoform_49861_27	chr3	-	184	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	58609912	58609728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_58609700_58609900
Isoform_49863_4	chr2	+	728	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84335730	84336458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_84335700_84336500
Isoform_49864_4	chr3	+	2251	1	FSM	ENSMUSG00000027765.7	ENSMUST00000193943.2	2203	1	-46	-2	-42	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTGGCATAGTATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	60910173	60912424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_60910200_60912400
Isoform_49865_3	chr3	-	2899	1	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4228000	4225101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_4225100_4228000
Isoform_49868_14	chr3	+	2488	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2918	1387	2918	-1387	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTTGTGGTTTTGTGT	NA	False	NA	68	True	AATACA	-25	NA	61271976	61274464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_61272000_61274500
Isoform_49869_3	chr3	+	3863	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2925	5	2925	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGCCCTGAGTTGTT	NA	False	NA	NA	False	AATAAA	-36	NA	61271983	61275846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_61272000_61275800
Isoform_49874_5	chr3	-	798	1	FSM	ENSMUSG00000074580.12	ENSMUST00000193051.2	1725	1	930	-3	-99	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGGATC	NA	False	NA	NA	False	ATTAAA	-17	NA	65435704	65434906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_65434900_65435700
Isoform_49876_4	chr3	-	176	1	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	65601635	65601459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_65601500_65601600
Isoform_49878_3	chr3	-	3416	1	Antisense	novelGene_ENSMUSG00000027777.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAACTACCTAATA	NA	False	NA	NA	False	NA	NA	NA	68401395	68397979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_-_68398000_68401400
Isoform_49879_4	chr3	-	177	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTGGAAGTCATT	NA	False	NA	NA	False	NA	NA	NA	68506410	68506233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_68506200_68506400
Isoform_4988_797	chr11	-	1286	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	553	119	-458	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCAGACTCTGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	21521815	21507244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
Isoform_49880_11	chr3	+	2738	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	-235	75	-235	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCTCAAAGCTAATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	68776683	68779421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68776700_68779400
Isoform_49881_5	chr3	+	2796	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	-224	6	-224	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTTCTCTGTGCATT	NA	False	NA	NA	False	ATTAAA	-38	NA	68776694	68779490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_68776700_68779500
Isoform_49883_5	chr3	-	836	1	Genic_Genomic	ENSMUSG00000027782.11	novel	NA	NA	NA	NA	-3	-31566	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	69034449	69033613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_69033600_69034400
Isoform_49884_8	chr3	-	176	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGAGTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	69606420	69606244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_69606200_69606400
Isoform_49885_4	chr3	-	1224	1	Genic_Genomic	ENSMUSG00000099370.2	novel	NA	NA	NA	NA	-5	-6673	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	75563043	75561819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_-_75561800_75563000
Isoform_49888_5	chr3	+	187	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATGAACCCAAGC	NA	False	NA	NA	False	NA	NA	NA	76831803	76831990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_76831800_76832000
Isoform_49889_6	chr3	+	180	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	79320220	79320400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_79320200_79320400
Isoform_49890_3	chr3	+	578	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79439572	79440150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_79439600_79440200
Isoform_49892_4	chr3	+	913	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTGGCATTT	NA	False	NA	NA	False	NA	NA	NA	83477339	83478252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_83477300_83478300
Isoform_49893_13	chr16	+	177	1	ISM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	30463	1040	30413	-1040	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAGTATCACTA	NA	False	NA	NA	False	NA	NA	NA	19946754	19946931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr16_+_19946800_19946900
Isoform_49894_7	chr3	-	2267	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	84721713	84719446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_84719400_84721700
Isoform_49895_3	chr3	-	171	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTAAAAAAAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	85503137	85502966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_85503000_85503100
Isoform_49896_6	chr3	+	221	1	ISM	ENSMUSG00000049230.9	ENSMUST00000061419.9	1830	2	0	4235	0	-4235	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATCTGATTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	10153169	10153390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr3_+_10153200_10153400
Isoform_49897_3	chr3	+	289	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGGAA	3441	False	NA	NA	False	NA	NA	NA	86020679	86020968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_86020700_86021000
Isoform_49898_16	chr3	+	177	1	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7340	False	NA	NA	False	NA	NA	NA	86024578	86024755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_86024600_86024800
Isoform_49899_3	chr3	-	164	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87096009	87095845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_87095800_87096000
Isoform_4990_10	chr11	-	1742	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	97	119	-2	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGGCTGTAATTTG	NA	False	NA	NA	False	AATAAA	-12	NA	21521815	21506788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
Isoform_49900_7	chr3	-	176	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATCTGAGCAATGAA	NA	False	NA	-2	True	NA	NA	NA	10366813	10366637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_10366600_10366800
Isoform_49902_4	chr3	-	208	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTATTGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	87798826	87798618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_87798600_87798800
Isoform_49908_13	chr3	-	1840	1	NIC	ENSMUSG00000004896.17	novel	1568	7	NA	NA	-7	-3056	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAAACTAAATGGAGA	9436	False	NA	NA	False	TTTAAA	-17	NA	87837458	87835618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_87835600_87837500
Isoform_49913_4	chr3	-	182	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGATAGATAGAAA	NA	False	NA	NA	False	NA	NA	NA	88180155	88179973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_88180000_88180200
Isoform_49914_4	chr3	-	1443	1	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	618	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAGAAAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	10416375	10414932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_10414900_10416400
Isoform_49916_5	chr3	+	260	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-8	NA	10418043	10418303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_10418000_10418300
Isoform_49917_4	chr3	-	3327	1	Antisense	novelGene_ENSMUSG00000008604.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAACCAAACCAAAA	4100	False	NA	NA	False	NA	NA	NA	88477811	88474484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr3_-_88474500_88477800
Isoform_49920_7	chr3	-	180	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCTGATCA	NA	False	NA	-26	True	NA	NA	NA	88482801	88482621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_88482600_88482800
Isoform_49921_10	chr3	+	1493	1	Genic_Genomic	ENSMUSG00000041355.14	novel	NA	NA	NA	NA	-78	-2686	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	88483104	88484597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr3_+_88483100_88484600
Isoform_49924_6	chr3	+	952	1	NIC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	-10	-27438	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	10432007	10432959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_10432000_10433000
Isoform_49926_4	chr3	-	200	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGGATTCAGTCGCT	NA	False	NA	NA	False	NA	NA	NA	88623188	88622988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_88623000_88623200
Isoform_49927_5	chr3	+	442	1	NIC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	21	-49909	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	88682543	88682985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_88682500_88683000
Isoform_49928_4	chr3	-	190	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAGATCACACACCCT	NA	False	NA	NA	False	NA	NA	NA	10449504	10449314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_10449300_10449500
Isoform_49929_8	chr3	-	176	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	8669	False	NA	NA	False	NA	NA	NA	88747296	88747120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_88747100_88747300
Isoform_4993_111	chr11	-	2662	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	400	-5	-156	5	multi-exon	FALSE	canonical	3	288	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATAAGTGATACTCTTT	4369	False	NA	-23	True	AATAAA	-26	NA	22809701	22784741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_22787196_22809493
Isoform_49931_5	chr3	-	236	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATATTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	89034609	89034373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_89034400_89034600
Isoform_49932_3	chr3	-	1580	1	NIC	ENSMUSG00000027534.17	novel	2512	7	NA	NA	0	-19586	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGGAAAAAAAAAGAAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	10505162	10503582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_10503600_10505200
Isoform_49934_4	chr3	-	2292	1	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-11	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177844	89175552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_-_89175600_89177800
Isoform_49936_7	chr3	+	181	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6054	False	NA	NA	False	NA	NA	NA	89373673	89373854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_89373700_89373900
Isoform_49937_4	chr3	-	735	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	-445	4381	4	-4381	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTTAAGAAATTCGT	2642	False	NA	NA	False	NA	NA	NA	89680543	89679808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_-_89679800_89680500
Isoform_4994_27	chr11	-	2702	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	364	-9	-192	9	multi-exon	FALSE	canonical	3	288	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGATACTCTTTCTGT	4333	False	NA	-19	True	AATAAA	-30	NA	22809737	22784737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_22787196_22809493
Isoform_49941_3	chr3	-	188	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5306	False	NA	NA	False	NA	NA	NA	89886166	89885978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_89886000_89886200
Isoform_49942_10	chr3	-	177	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAGAAGTACAAT	NA	False	NA	NA	False	NA	NA	NA	11875669	11875492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_11875500_11875700
Isoform_49946_5	chr4	+	2871	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4261	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146038175	146063189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
Isoform_49948_3	chr18	+	180	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	35106737	35106917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_35106700_35106900
Isoform_49949_3	chr3	-	290	1	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	90349337	90349047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_90349000_90349300
Isoform_49950_3	chr3	+	171	1	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90381900	90382071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_90381900_90382100
Isoform_49953_9	chr3	+	211	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91870048	91870259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_91870000_91870300
Isoform_49959_4	chr3	+	1976	1	NIC	ENSMUSG00000027907.5	novel	511	3	NA	NA	9	-3815	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	93427803	93429779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr3_+_93427800_93429800
Isoform_49960_7	chr12	+	4188	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTATTCTATTAGC	NA	False	NA	NA	False	NA	NA	NA	23916763	23920951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_23916800_23921000
Isoform_49961_26	chr3	-	2907	2	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	41	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	93608683	93605746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_93608455_93608484
Isoform_49964_3	chr3	+	180	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	93869019	93869199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_93869000_93869200
Isoform_49967_3	chr3	-	176	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAATTCAAATGC	NA	False	NA	NA	False	NA	NA	NA	94809360	94809184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_94809200_94809400
Isoform_49968_5	chr3	-	243	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATCTGTAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-42	NA	14685785	14685542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_14685500_14685800
Isoform_49969_7	chr3	+	235	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGATGATTTGGT	NA	False	NA	NA	False	NA	NA	NA	94928495	94928730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_94928500_94928700
Isoform_49970_6	chr3	+	173	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6378	False	NA	NA	False	NA	NA	NA	94939482	94939655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_94939500_94939700
Isoform_49971_9	chr4	-	2436	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	18	236	18	-236	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-4	True	NA	NA	False	AATAAA	-17	NA	3574835	3549276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
Isoform_49976_4954	chr4	-	502	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	66	3138	66	1	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	4954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGCTGGCTTTTGTTC	-1	True	NA	-39	True	AATAAA	-16	NA	3835599	3834471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
Isoform_49978_77	chr4	-	530	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	33	3143	33	-4	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAAATTTTGCTGGCTTT	NA	False	NA	-44	True	AATAAA	-11	NA	3835632	3834476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
Isoform_49980_3	chr4	-	1279	3	NNC	ENSMUSG00000045573.10	novel	721	3	NA	NA	-10	-34	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAATAAACCCGTGACC	178	False	NA	-41	True	AATAAA	-17	NA	4138829	4133564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_4134508_4138005_4138147_4138634
Isoform_49981_3	chr4	-	4951	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	42	1550	42	-1550	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTCTCTAATTCTCT	15	True	NA	-11	True	AATAAA	-16	NA	4793313	4764033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
Isoform_49982_5	chr4	-	1830	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-4	4717	-4	-4717	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAAGAAGTCTCATAT	-31	True	NA	NA	False	AATAAA	-31	NA	4793359	4767200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
Isoform_49984_60	chr4	-	3503	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	0	4	0	-4	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCACTCTTATCTTATT	25	True	NA	NA	False	ATTAAA	-17	NA	6454271	6396210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
Isoform_49986_4	chr4	-	1936	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	1917	0	-1917	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTGCACTCTCAATT	-1	True	NA	NA	False	AATAAA	-16	NA	8239041	8145278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
Isoform_49987_4	chr4	-	1453	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	2	2398	2	-2398	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTATCTCGTGTTGT	1	True	NA	NA	False	AATACA	-15	NA	8239039	8145759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
Isoform_49988_20	chr4	-	4407	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	81	2206	5	-2206	multi-exon	TRUE	canonical	0	0	junction_21	108.084473020543	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCCTCGCTCTTACTT	9	True	NA	0	True	AATAAA	-21	NA	9669081	9451284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_49991_4	chr4	-	4413	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-3	-2206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	119.602934762408	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCCTCGCTCTTACTT	1	True	NA	0	True	AATAAA	-21	NA	9669089	9451284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639346_9668780
Isoform_49995_11	chr4	-	4370	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	65	2211	-11	-2211	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	-7	True	NA	-5	True	AATAAA	-16	NA	9669097	9451289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_49997_4	chr4	-	4381	23	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-21	-2208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	125.859696579725	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCCTCGCTCTTAC	7	False	9669114	-2	True	AATAAA	-19	NA	9669107	9451286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639346_9668780
Isoform_49998_21	chr4	-	2811	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	77	-4	1	4	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	5	True	NA	0	True	AATAAA	-21	NA	9669085	9575262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_50000_6	chr4	-	2787	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	48	1	-28	-1	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGATTGTCATTATTT	0	True	NA	-5	True	AATAAA	-16	NA	9669114	9575267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
Isoform_50001_280	chr4	-	2885	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	92	0	92	0	multi-exon	FALSE	canonical	3	844	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	3	True	NA	-1	True	AATAAA	-17	NA	11007584	10988661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_10991355_11007392
Isoform_50003_22	chr4	-	2973	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	4	0	4	0	multi-exon	FALSE	canonical	3	844	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	False	NA	-1	True	AATAAA	-17	NA	11007672	10988661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_10991355_11007392
Isoform_50008_43	chr4	-	1078	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	-1	5	0	0	multi-exon	FALSE	canonical	0	0	junction_7	119.468549731718	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-20	True	NA	-8	True	NA	NA	NA	11076205	11051049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
Isoform_50009_3	chr4	-	1129	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	6	-53	6	53	multi-exon	TRUE	canonical	0	0	junction_7	119.468549731718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-13	True	NA	50	True	ATTAAA	-13	NA	11076198	11050991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
Isoform_50010_25	chr4	-	993	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	-28	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	146.340531024075	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATTTACTTTTAGTTT	-20	True	NA	-36	True	AAAAAG	-27	NA	11076205	11051077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
Isoform_50012_282	chr4	-	3223	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	-3	0	-3	0	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-4	True	NA	-14	True	ATTAAA	-20	NA	11254261	11204382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_50015_8	chr4	-	3674	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	-3	-451	-3	178	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAATTTTACC	-4	True	NA	NA	False	AATAAA	-22	NA	11254261	11203931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_50017_16	chr4	-	3084	26	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	-1	4379	-1	-7	5prime_fragment	FALSE	canonical	3	373	junction_21	32.4407151585781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTGCAAAGATCTTG	-2	True	NA	NA	False	ATTAAA	-15	NA	11254259	11208761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
Isoform_5002_27	chr11	-	2741	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-13	-126	-13	8	multi-exon	FALSE	canonical	3	85	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGATACTCTTTCTG	3569	False	NA	-20	True	AATAAA	-29	NA	22810501	22784738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_22787196_22810217
Isoform_50020_14	chr4	-	2750	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	13	3991	13	-3991	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACATAAAGGGAAGTTG	3	True	NA	NA	False	ATTAAA	-6	NA	11322124	11265305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
Isoform_50021_4	chr4	-	3690	14	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	2.77776462850274	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGCACTCTTCTTCTT	0	True	NA	1	True	AATAAA	-20	NA	11386766	11331933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
Isoform_50023_3	chr4	-	3236	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108301.8	2635	2	-604	3	2	1	multi-exon	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGACTGCTATGTTTAA	-11	True	NA	NA	False	AATAAA	-17	NA	11966425	11959809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11962234_11965613
Isoform_50024_17	chr4	-	2607	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-25	6	0	-2	multi-exon	FALSE	canonical	3	47	junction_2	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGAGACTGCTATGTT	-38	True	NA	NA	False	AATAAA	-14	NA	11966452	11959812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11962234_11965613_11965649_11966301
Isoform_50026_7	chr4	-	2532	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	42	1627	10	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTGCTATGTTTA	4	True	NA	NA	False	AATAAA	-16	NA	11966410	11959810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_11962234_11966301
Isoform_50029_8	chr4	-	3478	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	-29	7	21	1	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAAATTTTGGTTTGCGT	-25	True	NA	NA	False	AATAAA	-25	NA	12087986	12039361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
Isoform_50030_6	chr4	-	1298	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACATAGTCTTTCT	-1	True	NA	-45	True	ATTAAA	-36	NA	12171998	12153726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_50031_89	chr4	-	1147	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	-10	True	NA	-40	True	ATTAAA	-41	NA	12171842	12153721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_50033_5	chr4	-	1263	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-1	87	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAGATTTAATGCACTA	125	False	NA	46	True	ATTAAA	-20	NA	12171872	12153635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_50034_81	chr4	-	3084	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	174	-1	-18	1	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	5	True	NA	1	True	AATAAA	-20	NA	14826413	14809505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_50035_94	chr4	-	2546	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	174	537	-18	2	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTAATGTTATCTT	5	True	NA	0	True	AATAAA	-14	NA	14826413	14810043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_50036_31	chr4	-	3106	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	152	-1	-40	1	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	-17	True	NA	1	True	AATAAA	-20	NA	14826435	14809505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_50042_8	chr4	-	3257	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	1	-1	1	1	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	-1	True	NA	1	True	AATAAA	-20	NA	14826586	14809505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
Isoform_50045_20	chr4	-	3079	7	NNC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_5	96.2042098870938	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTGTATATTCAAATTG	6	True	NA	1	True	AATAAA	-20	NA	14826412	14809505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822769_14825498_14825654_14826290
Isoform_50049_7	chr4	-	2291	2	ISM	ENSMUSG00000040550.18	ENSMUST00000151012.3	2647	8	-4	13426	-4	-13426	5prime_fragment	FALSE	canonical	3	328	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAAAAAT	19	True	NA	NA	False	NA	NA	NA	14826399	14823471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_14825654_14826290
Isoform_5005_535	chr11	-	768	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	124	3616	-6	7	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAAACCTCTCAAA	NA	False	NA	-24	True	AATATA	-17	NA	22932258	22849751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_22850058_22906410_22906693_22932078
Isoform_50050_65	chr4	-	1169	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	124	1666	-108	-1666	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGAGTGTCTGCTCTG	-10	True	NA	-7	True	AATAAA	-37	NA	15945383	15918905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
Isoform_50051_3	chr4	-	2850	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	110	-1	110	1	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGTAGAGGTTGCATC	NA	False	NA	NA	False	ATTAAA	-20	NA	15945397	15917238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
Isoform_50052_12	chr4	-	2515	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	40	103	-27	3	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-3	True	NA	-1	True	AATAAA	-20	NA	16013848	15997223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50053_8	chr4	-	2541	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	12	105	12	1	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	0	True	NA	-3	True	AATAAA	-18	NA	16013876	15997225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50054_20	chr4	-	1825	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	39	794	-28	-688	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAGTGTATTGGCTT	-4	True	NA	-5	True	ATTAAA	-16	NA	16013849	15997914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50055_5	chr4	-	2614	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	39	5	-28	-5	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGATTGTGCCCTTTC	-4	True	NA	97	True	ATTAAA	-13	NA	16013849	15997125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50057_10	chr4	-	1795	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-28	-689	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCAGTGTATTGGCT	-4	True	NA	-6	True	ATTAAA	-15	NA	16013849	15997915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50058_9	chr4	-	2485	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	-4	True	NA	-3	True	AATAAA	-18	NA	16013849	15997225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
Isoform_50060_5	chr4	-	1983	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	23	-688	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	48.0524713204222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAGTGTATTGGCTT	23	False	NA	-5	True	ATTAAA	-16	NA	16013865	15997914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_50061_3	chr4	-	2656	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	48.0524713204222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	-4	True	NA	-3	True	AATAAA	-18	NA	16013849	15997225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
Isoform_50062_32	chr4	-	1970	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	80	642	76	-634	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	51	False	NA	-9	True	AGTAAA	-13	NA	16163567	16123374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_50063_7	chr4	-	2615	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	67	10	63	-2	multi-exon	TRUE	canonical	3	70	junction_4	17.1373860317144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTATCTTCTGGT	38	False	NA	-10	True	AATAAA	-17	NA	16163580	16122742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_50064_3	chr4	-	2701	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-21	12	-21	-4	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTTTTTATCTTCTG	NA	False	NA	-12	True	AATAAA	-15	NA	16163668	16122744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_50065_9	chr4	-	2103	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-53	642	-53	-634	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	NA	False	NA	-9	True	AGTAAA	-13	NA	16163700	16123374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
Isoform_50068_3	chr4	-	5646	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	2	0	2	0	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGCTGTGTTTGGTTT	-11	True	NA	-6	True	AATAAA	-15	NA	19570106	19519253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
Isoform_50069_23	chr4	-	860	8	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-10	17271	-10	4087	5prime_fragment	FALSE	canonical	3	133	junction_3	15.8152600035406	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATATCTTTGCAGCTA	NA	False	NA	NA	False	NA	NA	NA	19570118	19536524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
Isoform_50071_18	chr4	-	603	5	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-3	64122	-3	-62752	5prime_fragment	FALSE	canonical	3	179	junction_4	12.1937483982572	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTAAGTGGCTTTCG	180	False	19709024	-6	True	NA	NA	NA	19708996	19672424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_50072_3	chr4	-	749	5	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-147	64120	-147	-62750	5prime_fragment	FALSE	canonical	3	179	junction_4	12.1937483982572	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAAGTGGCTTTCGAA	10	True	NA	-4	True	NA	NA	NA	19709140	19672422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_50073_8	chr4	-	401	3	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-59	70042	-59	-68672	5prime_fragment	FALSE	canonical	3	179	junction_2	16.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGATTTTAATAATAA	124	False	NA	NA	False	NA	NA	NA	19709052	19678344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_19678436_19687790_19687887_19708838
Isoform_50074_6	chr4	-	491	3	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-149	70042	-149	-68672	5prime_fragment	FALSE	canonical	3	179	junction_2	16.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGATTTTAATAATAA	8	True	NA	NA	False	NA	NA	NA	19709142	19678344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_19678436_19687790_19687887_19708838
Isoform_50076_112	chr4	-	1501	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	87	0	87	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	3	True	NA	0	True	AATAAA	-24	NA	21767125	21757381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
Isoform_50077_13	chr4	-	759	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	26	803	26	-803	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTCTTTTCTCAT	9	True	NA	NA	False	NA	NA	NA	21767186	21758184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
Isoform_50079_6	chr4	-	1399	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	79	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	127.017933991841	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCATGCATGTATTTC	-5	True	NA	-5	True	AATAAA	-19	NA	21767133	21757386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_21758476_21759369_21759425_21759622_21759794_21767049
Isoform_50080_8	chr4	-	3859	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	5	-1	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTTATACAGTCTA	-1	True	NA	-11	True	AATAAA	-18	NA	25281816	25248600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_50081_12	chr4	-	2755	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	15	1546	15	-4	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAAGGACTTGTTTGTT	9	True	NA	-1	True	AATAAA	-20	NA	25281806	25250150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_50085_3	chr4	-	2090	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	9	5739	9	-4197	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATGACTTTTTCCA	3	True	NA	NA	False	AGTAAA	-19	NA	25281812	25254343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
Isoform_50089_4	chr4	-	2887	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	297	8950	6	616	multi-exon	FALSE	canonical	3	36	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAATGTTCTGAT	-23	True	NA	NA	False	NA	NA	NA	25799849	25618281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_50091_7	chr4	-	2383	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	295	9456	4	110	multi-exon	FALSE	canonical	3	36	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCTATCTGATCATTT	-25	True	NA	NA	False	AATAAA	-16	NA	25799851	25618787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_25620821_25709027_25709115_25799588
Isoform_50092_5	chr4	-	4872	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	-4	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	25.7815340893439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	-4	True	NA	-7	True	AATAAA	-22	NA	26346895	26324508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346592
Isoform_50093_6	chr4	-	3209	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	-284	-1480	20	1480	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCAAAAACAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	33189717	33172749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
Isoform_50094_186	chr4	-	1636	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	1	11	1	-11	multi-exon	FALSE	canonical	3	146	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGGTAGTCTTGGCT	0	True	NA	-9	True	TTTAAA	-27	NA	33248509	33245433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_33246508_33247947
Isoform_50095_32	chr4	-	1670	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	-33	11	-33	-11	multi-exon	FALSE	canonical	3	146	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGGTAGTCTTGGCT	194	False	NA	-9	True	TTTAAA	-27	NA	33248543	33245433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_33246508_33247947
Isoform_501_186	SIRV6	-	277	1	FSM	SIRV6B	SIRV617	276	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTACTTGGGCACCTT	NA	False	NA	NA	False	NA	NA	NA	1820	1543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_-_1500_1800
Isoform_5010_3	chr11	-	1062	9	FSM	ENSMUSG00000020288.14	ENSMUST00000109539.8	3583	9	-19	2540	-19	5	multi-exon	FALSE	canonical	3	33	junction_8	76.5816557669002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTACCGCCCAGAATGC	NA	False	NA	-13	True	AATAAA	-11	NA	23447949	23440421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446877_23447774
Isoform_50100_159	chr4	-	2264	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	2	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-3	True	NA	-17	True	CATAAA	-21	NA	34614911	34570795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_50102_7	chr4	-	3051	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	-20	-765	11	765	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGGTATCCTATAAAAA	NA	False	NA	-31	True	ATTAAA	-16	NA	34614933	34570030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_50103_4	chr4	-	2364	21	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	207.784166865524	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-7	True	NA	-18	True	CATAAA	-20	NA	34614915	34570796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34610361_34610459_34611021_34611077_34614864
Isoform_50105_158	chr4	-	2267	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	33	0	0	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-3	True	NA	-17	True	CATAAA	-21	NA	34614911	34570795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_50106_8	chr4	-	3011	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	52	-763	1	763	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTTGGTATCCTATAAA	16	True	NA	-33	True	ATTAAA	-14	NA	34614892	34570032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_50108_3	chr4	-	2150	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	59.0750317393059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCAGTTACTTTGTT	-11	True	NA	-12	True	AATAAA	-15	NA	34687428	34663255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34673808_34673929_34675029_34675183_34675471_34675632_34683284_34683463_34687243
Isoform_50109_22	chr4	-	2038	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	1	0	1	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-20	True	NA	-13	True	AATAAA	-14	NA	34687437	34663256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
Isoform_5011_32	chr11	-	1750	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	84	1189	-16	-153	multi-exon	TRUE	canonical	3	225	junction_2	27.6394193137265	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	-4	True	AATAAA	-20	NA	23447946	23439735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_50111_4	chr4	-	1682	11	FSM	ENSMUSG00000028294.16	ENSMUST00000108136.8	1688	11	2	4	2	-4	multi-exon	FALSE	canonical	2	4	junction_2	1.88679622641132	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTTTACTGTGTATT	18	True	NA	NA	False	ATTAAA	-11	NA	34730176	34711335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34719782_34721415_34721575_34722607_34722797_34724814_34724906_34727904_34727989_34728795_34728909_34730059
Isoform_50112_5	chr4	-	750	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	13	19	-2	-8	multi-exon	FALSE	canonical	3	19	junction_2	76	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAGAATAAAACAAAG	0	True	NA	NA	False	ACTAAA	-11	NA	34778351	34768682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34769148_34771257_34771415_34778223
Isoform_50114_33	chr4	-	693	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	74	19	0	-8	multi-exon	FALSE	canonical	3	160	junction_2	5.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAGAATAAAACAAAG	2	True	NA	NA	False	ACTAAA	-11	NA	34778349	34768682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_50115_3	chr4	-	2137	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	95	-1446	3	1446	multi-exon	FALSE	canonical	3	160	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAACATGAATGTATT	23	True	NA	NA	False	AATAAA	-31	NA	34778328	34767217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34769148_34771257_34771415_34778278
Isoform_50118_3	chr4	-	6948	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	14	3024	14	-3024	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGACAAAGCGAAAGAAAAA	-5	True	NA	NA	False	AATGAA	-8	NA	34882946	34806136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
Isoform_50124_13	chr4	-	2387	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	5	3638	5	-3638	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGACATGAATGTATT	-27	True	NA	NA	False	AATAAA	-18	NA	35157479	34952711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
Isoform_50125_20	chr4	-	2457	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	0	1076	0	-4	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTACTTCCAATTCATT	-9	True	NA	-14	True	AATAAA	-18	NA	40220600	40204852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
Isoform_50126_4	chr4	-	3535	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	2	-4	2	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGTGTTTTTTTCTG	-7	True	NA	NA	False	NA	NA	NA	40220598	40203772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
Isoform_50128_4	chr4	-	3787	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	1227	14	1227	-14	3prime_fragment	FALSE	canonical	3	214	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTCAGACAATTTTCT	1190	False	NA	-14	True	AATAAA	-14	NA	40268623	40259614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_40263082_40268303
Isoform_5013_4	chr11	-	1842	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	-8	1189	-8	-153	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	-4	True	AATAAA	-20	NA	23448038	23439735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_50132_52	chr4	-	3834	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	17	5	17	-5	multi-exon	FALSE	canonical	3	214	junction_1	19	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTTTCTGTGCAACAT	-20	True	NA	-5	True	AATAAA	-23	NA	40269833	40259605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40263082_40268303_40268502_40269673
Isoform_50138_702	chr4	-	541	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	47	71	35	3	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCCGTGTTACTGTC	-14	True	NA	-8	True	AATAAA	-20	NA	40279374	40270661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
Isoform_50144_23	chr4	-	1368	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	22	3860	-10	0	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	-2	True	NA	-8	True	AATATA	-17	NA	40703172	40686241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
Isoform_50146_285	chr4	-	1781	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	65	572	25	-572	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCTCATAAGGGGGAG	-2	True	NA	-11	True	AATAAA	-20	NA	40757858	40737113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_50148_86	chr4	-	1805	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	38	575	-2	-575	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-29	True	NA	-14	True	AATAAA	-17	NA	40757885	40737116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_50149_12	chr4	-	2280	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	61	77	21	-77	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCCAGTCTCTTAT	-6	True	NA	-16	True	AAGAAA	-8	NA	40757862	40736618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_5015_11	chr11	-	1289	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	50	1684	-50	90	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATGCTGCATTGAGTGA	NA	False	NA	NA	False	TTTAAA	-19	NA	23447980	23440230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
Isoform_50150_12	chr4	-	2348	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	58	12	18	-12	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTTGAAAATAGGTTCC	-9	True	NA	49	True	ACTAAA	-22	NA	40757865	40736553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_50154_6	chr4	-	2091	9	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	61	5564	21	1478	5prime_fragment	FALSE	canonical	3	1190	junction_5	73.8732021777857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAGAACCTCC	-6	True	NA	NA	False	NA	NA	NA	40757862	40742105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
Isoform_50158_99	chr4	-	3955	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	27	1	27	-1	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTCTTTTCTTTTTT	7	True	NA	-2	True	AATAAA	-17	NA	40853978	40804602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
Isoform_5016_4	chr11	-	4174	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-43	-3	-35	3	multi-exon	TRUE	canonical	3	83	junction_12	9.91208520476776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTGGAGAAAGTCCC	NA	False	NA	-12	True	AATAAA	-12	NA	23583674	23523784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_50163_681	chr4	-	1325	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	3	20	3	-18	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	18	False	40948309	-27	True	AAAAAG	-19	NA	40948291	40936418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
Isoform_50169_603	chr4	-	1764	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	1	0	-1	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTTTGTGTGTGTTT	-1	True	NA	-5	True	AATAAA	-20	NA	41098183	41092722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
Isoform_5017_10	chr11	-	2039	16	ISM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-23	14853	-15	-12011	5prime_fragment	FALSE	canonical	3	83	junction_6	9.9643810088178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGTAATTAAAATCAA	NA	False	NA	NA	False	AAGAAA	-10	NA	23583654	23538640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
Isoform_50176_324	chr4	-	4421	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	0	178	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	27	False	41124289	-4	True	NA	NA	NA	41124277	41114426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
Isoform_50178_9	chr4	-	5231	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	-810	178	810	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGACG	27	False	41124289	NA	False	NA	NA	NA	41124277	41113616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
Isoform_50180_80	chr4	-	4333	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	36	-1	17	1	multi-exon	TRUE	canonical	3	748	junction_17	84.4073804080362	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_50182_3	chr4	-	4394	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-10	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_29	245.859694334908	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGCATTCTTGGTC	5	True	NA	-16	True	AATAAA	-2	NA	41275099	41194325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41275039
Isoform_50183_3	chr4	-	4030	25	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	196.907761824329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_50184_20	chr4	-	4315	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_12	158.993144987642	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
Isoform_50186_89	chr4	-	3432	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	8	2	8	-2	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	2	True	NA	-2	True	AATAAA	-16	NA	41314881	41291301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
Isoform_50188_206	chr4	-	3391	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	49	2	49	-2	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	-4	True	NA	-2	True	AATAAA	-16	NA	41314840	41291301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
Isoform_5019_3	chr11	-	1030	7	NNC	ENSMUSG00000042208.16	novel	1279	10	NA	NA	0	-3305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.6886600896523	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGATGACTTAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	23583631	23565134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_23565257_23567137_23567197_23570228_23570468_23574935_23575123_23578872_23579032_23581209_23581335_23583492
Isoform_50197_5	chr4	-	2308	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	49	20211	49	-20211	5prime_fragment	FALSE	canonical	3	561	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGTGTTTAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	41314840	41311510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_41313466_41314487
Isoform_50198_17	chr4	-	4212	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-38	-1	-38	1	multi-exon	FALSE	canonical	3	158	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTTTCTTGCTT	-30	True	NA	-1	True	NA	NA	NA	41503114	41495602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41499691_41502990
Isoform_50199_179	chr4	-	833	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	23	0	23	0	multi-exon	FALSE	canonical	3	191	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	-2	True	NA	-17	True	AATAAA	-14	NA	41713511	41712032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41712815_41713460
Isoform_5020_64	chr11	-	1727	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	76	2343	-31	634	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	-3	True	AATAAA	-29	NA	23615883	23598821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_50200_5	chr4	-	736	6	FSM	ENSMUSG00000028447.12	ENSMUST00000171641.2	885	6	-4	153	3	-153	multi-exon	FALSE	canonical	3	44	junction_1	342.598657323697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGCCTGTTGGCCTG	-13	True	NA	NA	False	AATAAA	-14	NA	41723167	41714950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41715239_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_50201_359	chr4	-	815	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	7	151	0	-151	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCCTGTTGGCCTGCT	-9	True	NA	NA	False	AATAAA	-16	NA	41723163	41714948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_50202_5	chr4	-	958	8	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	5	-153	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	400.02408090779	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGCCTGTTGGCCTG	-4	True	NA	NA	False	AATAAA	-14	NA	41723158	41714950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41716968_41717119_41717356_41717441_41719836_41719924_41720782_41720868_41723034
Isoform_50203_393	chr4	-	1604	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	29	7	-10	-7	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCGTTTCCTTATG	-7	True	NA	NA	False	AATAAA	-10	NA	41741330	41738499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
Isoform_50205_10	chr4	-	1557	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCGTTTCCTTATG	-7	True	NA	NA	False	AATAAA	-10	NA	41741330	41738499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
Isoform_50207_4	chr4	-	491	4	FSM	ENSMUSG00000073888.14	ENSMUST00000136768.8	556	4	52	13	-12	-2	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTCCAAAAACTTCCGT	621	False	NA	-8	True	AATAAA	-15	NA	41773549	41769479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464
Isoform_50208_5	chr4	-	593	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	-14	11	2	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCAAAAACTTCCGTCT	14	False	NA	-6	True	AATAAA	-17	NA	41774156	41769477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
Isoform_50220_2551	chr4	-	2888	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	73	355	-1	-355	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	2551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGAGTGAATTACCAG	1	True	NA	-4	True	AATAAA	-19	NA	43000434	42980317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_50222_355	chr4	-	3236	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	73	7	-1	-7	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGCCTGCGTTCTGG	1	True	NA	-22	True	AATAAA	-11	NA	43000434	42979969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_50223_83	chr4	-	2963	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	-2	355	-2	-355	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGAGTGAATTACCAG	10009	False	NA	-4	True	AATAAA	-19	NA	43000509	42980317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
Isoform_50234_3	chr4	-	2894	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-45	2	intron_retention	FALSE	canonical	1	5	junction_5	34.5418425809755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTGTATGTGTGTGTG	-19	True	NA	-4	True	ATTAAA	-18	NA	43010267	43002340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005009_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
Isoform_50235_123	chr4	-	2677	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	97	-3	-36	3	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTATGTGTGTGTGT	-10	True	NA	-3	True	ATTAAA	-19	NA	43010258	43002339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
Isoform_50237_9	chr4	-	2628	15	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	59	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	222	False	NA	-7	True	ATTAAA	-15	NA	43010296	43002343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
Isoform_50238_8	chr4	-	2911	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	NA	False	NA	-6	True	ATTAAA	-16	NA	43010578	43002342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
Isoform_5024_10	chr11	-	2519	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	29	1598	29	1379	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAACAGCTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	23615930	23598076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
Isoform_50240_3	chr4	-	2521	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	36.250191570375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	9	True	NA	-8	True	ATTAAA	-14	NA	43010239	43002344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009706_43009801_43010001
Isoform_50241_3	chr4	-	2876	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	92	junction_5	14.74482018277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	22	True	NA	-6	True	ATTAAA	-16	NA	43010226	43002342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
Isoform_50242_4	chr4	-	950	4	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	5180	3	-194	-3	3prime_fragment	FALSE	canonical	3	191	junction_2	7.31816613336672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	5912	False	NA	-10	True	AATAAA	-18	NA	43019900	43017637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
Isoform_50243_11	chr4	-	3503	11	FSM	ENSMUSG00000028454.17	ENSMUST00000067481.6	3525	11	20	2	20	-2	multi-exon	FALSE	canonical	3	19	junction_4	53.2560794651653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	13	True	NA	-9	True	AATAAA	-19	NA	43025799	43017636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_50246_4	chr4	-	4281	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	-45	3	18	-3	multi-exon	FALSE	canonical	3	131	junction_4	26.4280995238864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
Isoform_50247_22	chr4	-	4049	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	-5	True	NA	-11	True	AATAAA	-17	NA	43025781	43017638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
Isoform_50248_164	chr4	-	3576	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-3	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
Isoform_50249_4	chr4	-	3561	10	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	11	junction_3	52.3530276695898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	6353	False	NA	-11	True	AATAAA	-17	NA	43025078	43017638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
Isoform_50255_3133	chr4	-	1227	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	309	338	-31	-2	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	3133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAAACTGTCCTCATT	1	True	NA	-9	True	AATAAA	-14	NA	43031401	43028027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_50257_475	chr4	-	1262	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	281	331	7	5	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCCTCATTGATTGGG	2	True	NA	-2	True	AATAAA	-21	NA	43031429	43028020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_50259_42	chr4	-	1559	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	309	6	-31	-6	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTTGAGAGATGGCT	1	True	NA	-10	True	AATAAA	-13	NA	43031401	43027695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
Isoform_5026_36	chr11	-	3755	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-10	2	-10	-2	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTTTAATTTT	1259	False	NA	-3	True	TTTAAA	-6	NA	23845263	23812647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
Isoform_50271_19	chr4	-	3049	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	56	2	18	-2	multi-exon	TRUE	canonical	3	38	junction_5	6.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	-25	True	NA	0	True	AATAAA	-19	NA	43045741	43032415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
Isoform_50272_75	chr4	-	1630	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	26	3	-8	1	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTCCTGTCTAAATC	-22	True	NA	-6	True	AATAAA	-15	NA	43499669	43496144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_50274_4	chr4	-	1851	8	FSM	ENSMUSG00000051517.15	ENSMUST00000125834.8	1508	8	32	-375	-10	-1	multi-exon	FALSE	canonical	3	106	junction_5	13.3248272186983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAAGCCTTCCTGTCTA	18	True	NA	-10	True	AATAAA	-11	NA	43499629	43496148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43496721_43496820_43496910_43497086_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_50275_19	chr4	-	2127	7	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	8	1	intron_retention	FALSE	canonical	3	106	junction_4	12.5088857306405	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTCCTGTCTAAATC	-6	True	NA	-6	True	AATAAA	-15	NA	43499653	43496144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43496721_43496820_43496910_43497086_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
Isoform_50276_10	chr4	-	1055	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	109	0	-22	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9878	False	NA	-14	True	AATAAA	-16	NA	43523486	43514710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
Isoform_50277_6	chr4	-	3232	21	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	22936	1	8161	-1	3prime_fragment	FALSE	canonical	3	200	junction_19	29.8484086678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCAGCCTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-11	NA	43539486	43531519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365
Isoform_50278_3	chr4	-	4445	30	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	18545	2	3770	-2	3prime_fragment	FALSE	canonical	3	176	junction_29	31.9870663517789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCAGCCTGGCTTTA	NA	False	NA	-8	True	AATAAA	-10	NA	43543877	43531520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816
Isoform_50279_7	chr4	-	3321	25	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	178	13398	-87	493	5prime_fragment	FALSE	canonical	2	114	junction_2	22.9107189251378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTAGAGAAAGACCTAC	-11	True	NA	NA	False	NA	NA	NA	43562244	43544916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
Isoform_5028_6	chr11	-	1828	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTTTAAGCATTCCA	NA	False	NA	-6	True	AATAAA	-29	NA	26543654	26421402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
Isoform_50280_3	chr4	-	3596	25	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	-88	13389	-88	502	5prime_fragment	FALSE	canonical	2	114	junction_2	22.9107189251378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACCTACAGGAAATAA	5	False	NA	NA	False	NA	NA	NA	43562510	43544907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
Isoform_50284_4	chr4	-	533	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	396	8	127	-8	multi-exon	FALSE	canonical	3	68	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTATTATCTTCATAT	220	False	NA	-38	True	NA	NA	NA	43562295	43559350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43559718_43562129
Isoform_50285_4	chr4	-	642	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	287	8	18	-8	multi-exon	FALSE	canonical	3	68	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTATTATCTTCATAT	9	True	NA	-38	True	NA	NA	NA	43562404	43559350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43559718_43562129
Isoform_50286_3	chr4	-	732	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	198	7	-71	-7	multi-exon	FALSE	canonical	3	68	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATTATCTTCATATT	-6	True	NA	-37	True	NA	NA	NA	43562493	43559349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43559718_43562129
Isoform_50288_5	chr4	-	3553	17	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	15.5853246276746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTTAGTGTGGTGTG	-27	True	NA	-7	True	AATAAA	-10	NA	43578893	43566933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570907_43571188_43571408_43573750_43573867_43574027_43574120_43578015
Isoform_5029_12	chr11	-	1616	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	274	-1	-24	1	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTTTAAGCATTCCA	NA	False	NA	-6	True	AATAAA	-29	NA	26543646	26421402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
Isoform_50290_65	chr4	-	3558	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	-20	6	-20	-5	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTTAGTGTGGTGTG	-27	True	NA	-7	True	AATAAA	-10	NA	43578893	43566933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
Isoform_50291_356	chr4	-	596	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	15	-1	-3	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	3	True	NA	-6	True	AATAAA	-15	NA	43656451	43654227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
Isoform_50292_6	chr4	-	723	4	NIC	ENSMUSG00000028470.11	novel	610	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	693	junction_2	26.0426999794995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTATCCCTGTCT	3	True	NA	-9	True	AATAAA	-12	NA	43656451	43654230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_43654412_43654512_43654821_43654905_43655047_43656358
Isoform_50293_4	chr4	-	607	5	FSM	ENSMUSG00000028470.11	ENSMUST00000151238.8	600	5	-8	1	-3	0	multi-exon	FALSE	canonical	3	13	junction_1	305.186316043167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	3	True	NA	-6	True	AATAAA	-15	NA	43656451	43654227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_43654423_43654512_43654586_43654715_43654821_43654905_43655047_43656358
Isoform_50294_3	chr4	-	2865	13	NIC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	-48	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	21.6082545955629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAACTTGATATCTG	-37	True	NA	-15	True	NA	NA	NA	44072672	44036834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44063086_44063147_44066754_44066961_44072361
Isoform_50295_6	chr4	-	2630	11	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	5689	2	-28	2	3prime_fragment	FALSE	canonical	3	48	junction_9	6.87095335452075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATCTGGTCCCAG	5929	False	NA	-8	True	NA	NA	NA	44067089	44036827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754
Isoform_50296_79	chr4	-	2816	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	102	2	-52	2	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATCTGGTCCCAG	-41	True	NA	-8	True	NA	NA	NA	44072676	44036827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
Isoform_50297_7	chr4	-	2879	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	32	9	-10	-5	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAACTTGATATCTG	272	False	NA	-15	True	NA	NA	NA	44072746	44036834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
Isoform_50298_5	chr4	-	3058	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	113	20854	-41	2020	5prime_fragment	FALSE	canonical	3	64	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAGCTTATTTTGT	-30	True	NA	NA	False	AATAAA	-15	NA	44072665	44057679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_44060228_44066754_44066961_44072361
Isoform_50299_4	chr4	-	5058	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAAGTCGTGTTTCATG	19	True	NA	-7	True	AATAAA	-19	NA	44167921	44126216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
Isoform_5030_23	chr11	-	1529	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	121	14	0	-14	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAACAAAATTTTGG	NA	False	NA	NA	False	AATAAA	-5	NA	29197288	29171545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
Isoform_50300_6	chr4	-	3592	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	260	15	-7	-15	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAAAAGGCCC	-26	True	NA	NA	False	NA	NA	NA	45012152	44992995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44995387_45010951
Isoform_50301_11	chr4	-	2539	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	25	1752	25	-13	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	45012369	44992993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44995387_45012223
Isoform_50302_9	chr4	-	2612	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-50	1754	-32	-15	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAAAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	45012444	44992995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44995387_45012223
Isoform_50303_38	chr4	-	4620	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	9	6	9	-5	multi-exon	FALSE	canonical	3	26	junction_8	5.25737577123797	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGGTGCTTCTGGGGTC	-25	True	NA	-6	True	AATAAA	-14	NA	45084595	45034252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
Isoform_50305_29	chr4	-	675	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	-1	5	-1	-5	multi-exon	FALSE	canonical	3	56	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGCGTGGTTTTGT	-11	True	NA	NA	False	AATAAA	-9	NA	45108109	45105216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45105645_45106838_45106889_45107912
Isoform_50306_1022	chr4	-	631	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	5	3	-1	1	multi-exon	FALSE	canonical	3	2176	junction_1	0	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGGTTTTGTGTTTTT	-11	True	NA	NA	False	AATAAA	-15	NA	45108109	45105210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45105645_45107912
Isoform_50308_153	chr4	-	989	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	16	72	-9	-72	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTGTCAATCATGTA	-6	True	NA	-1	True	AATAAA	-17	NA	45320613	45316684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
Isoform_50309_114	chr4	-	1049	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	10	18	10	-18	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTTGGTAGTGTCTA	-12	True	NA	-19	True	TATAAA	-16	NA	45320619	45316630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
Isoform_5031_30	chr11	-	1291	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	81	292	-40	-292	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGACTGTTAGTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	29197328	29171823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
Isoform_50311_4	chr4	-	843	3	NNC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	11	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTGTCAATCATGTA	-11	True	NA	-1	True	AATAAA	-17	NA	45320618	45316684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_45317029_45317677_45317829_45320270
Isoform_50313_84	chr4	-	1934	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	0	2499	0	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-17	True	NA	NA	False	AATAAA	-19	NA	45408761	45398421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45400180_45404726_45404836_45408694
Isoform_50314_5	chr4	-	1795	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	26	-816	1	816	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCAGGGGTTTTAATG	10	True	NA	NA	False	AATAAA	-16	NA	45408734	45398424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45400180_45408694
Isoform_50315_21	chr4	-	2724	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	-480	0	-480	0	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTAGTCGGGTTTTTT	-26	True	NA	NA	False	AATAAA	-17	NA	45530810	45423277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
Isoform_50316_19	chr4	-	3706	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107770.2	2700	10	-22	-984	-5	-2	multi-exon	FALSE	canonical	3	38	junction_9	51.5344784502162	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	-29	True	NA	-5	True	AATAAA	-23	NA	46138460	46114747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
Isoform_50317_80	chr4	-	3673	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	51	2	-11	-2	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	7	True	NA	-5	True	AATAAA	-23	NA	46138424	46114747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
Isoform_50318_14	chr4	-	3615	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGTGGGAAGAGTGCT	-21	True	NA	-5	True	AATAAA	-23	NA	46138452	46114747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
Isoform_50322_33	chr4	-	953	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	2	0	2	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	6	True	NA	-1	True	AATAAA	-18	NA	46196309	46175221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
Isoform_50324_39	chr4	-	1464	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	2	61	2	-61	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTATATTCTTTTTTA	-12	True	NA	NA	False	NA	NA	NA	46389435	46379924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
Isoform_50325_15	chr4	-	1527	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	2	-2	2	2	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGAGCTTTGAATAT	-12	True	NA	NA	False	ATTAAA	-29	NA	46389435	46379861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
Isoform_50326_9	chr4	-	4219	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	89	7	89	-7	multi-exon	TRUE	canonical	2	8	junction_12	4.63381292481928	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGATGAGTGTCTGGGC	-7	True	NA	-6	True	AATAAA	-8	NA	46650120	46604396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
Isoform_50327_7	chr4	-	2912	2	FSM	ENSMUSG00000039740.7	ENSMUST00000143104.2	531	2	-323	-2058	33	-3	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCCAGTTTATGGTT	16	True	NA	-5	True	AATAAA	-12	NA	47474300	47469835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_47472386_47473938
Isoform_50328_195	chr4	-	2983	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	36	2	36	-2	multi-exon	FALSE	canonical	3	118	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCAGTTTATGGTTG	19	True	NA	-4	True	AATAAA	-13	NA	47474297	47469834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_47472459_47473938
Isoform_50329_29	chr4	-	3048	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	118	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	NA	False	NA	-2	True	AATAAA	-15	NA	47474360	47469832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_47472459_47473938
Isoform_50333_8	chr4	-	2673	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-61	12	-61	-12	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTAATAACTATCAGC	NA	False	NA	NA	False	AATAAA	-17	NA	48279619	48193334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
Isoform_50334_16	chr4	-	1471	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-4	1157	-4	10	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCCTCCCCCTGAC	16	True	NA	-18	True	AATAAA	-24	NA	48279562	48194479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
Isoform_50338_329	chr4	-	3085	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	12	5	12	-5	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	-17	True	NA	-8	True	ATTAAA	-13	NA	48473447	48430862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_50339_6	chr4	-	3144	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	17	-59	17	59	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGTTTGCCTGGAAT	-12	True	NA	56	True	AATAAA	-22	NA	48473442	48430798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
Isoform_50342_9	chr4	-	3306	15	NNC	ENSMUSG00000028345.16	novel	3203	16	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	8	True	NA	-8	True	ATTAAA	-13	NA	48473422	48430862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
Isoform_50343_18	chr4	-	2622	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTCATGAGCTTCCT	-27	False	NA	-8	True	ATTAAA	-13	NA	48473457	48430862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
Isoform_50347_224	chr4	-	2096	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	18	0	18	0	multi-exon	FALSE	canonical	3	1281	junction_1	0	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	-13	True	NA	0	True	AATAAA	-21	NA	49521075	49512595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_49514578_49520961
Isoform_5036_39	chr11	-	896	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	15	7	13	-7	multi-exon	FALSE	canonical	3	382	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTATTTCTTGTGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	29465018	29462882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29463677_29464916
Isoform_50370_70	chr4	-	3040	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-12	1	-12	-1	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACAATCTCTTTGTTTTT	-3	True	NA	-8	True	AATAAA	-20	NA	55532478	55527143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
Isoform_50384_43	chr4	-	4774	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	56	1330	56	2	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACTCAGTGGTAAAG	18	True	NA	-16	True	AATAAA	-20	NA	56802275	56751009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
Isoform_50385_14	chr4	-	5040	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	24	1096	24	236	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	-14	True	NA	-8	True	ATTAAA	-12	NA	56802307	56750775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
Isoform_50392_47	chr4	-	3382	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATACCGACTGGCTTAA	-8	True	NA	-7	True	AATAAA	-20	NA	56846084	56810935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
Isoform_50394_69	chr4	-	3672	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-9	1	-9	-1	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATACCGACTGGCTTAA	-26	True	NA	-7	True	AATAAA	-20	NA	56865197	56810935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_50396_3	chr4	-	3273	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-168	559	-168	-559	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTTAGGATTTAAACC	9261	False	NA	-8	True	AATAAA	-15	NA	56865356	56811493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_50397_5	chr4	-	3185	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-75	554	-75	-554	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGATTTAAACCTTTTC	9354	False	NA	-3	True	AATAAA	-20	NA	56865263	56811488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_50398_3	chr4	-	3701	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-37	0	-37	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	9392	False	NA	-6	True	AATAAA	-21	NA	56865225	56810934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_50399_5	chr4	-	1648	10	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	14	2	combination_of_known_junctions	FALSE	canonical	3	86	junction_9	65.1103526690753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATTTCCTACTGAAA	-2	True	NA	NA	False	AATAAA	-20	NA	56846078	56826000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
Isoform_504_138	SIRV6	-	190	1	FSM	SIRV6C	SIRV618	189	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTAGCTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	2547	2357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_-_2400_2500
Isoform_50400_3	chr4	-	1945	11	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-12	15068	-12	0	5prime_fragment	FALSE	canonical	3	197	junction_7	32.0661815625122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGGATTTCCTACTGA	-29	True	NA	NA	False	AATAAA	-18	NA	56865200	56826002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
Isoform_50404_55	chr4	-	4029	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-4	1034	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACCAAAATAAATAAATAA	1	True	NA	NA	False	NA	NA	NA	56947428	56878841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
Isoform_50405_12	chr4	-	4157	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	10	-2131	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	18	True	NA	-15	True	AATAAA	-15	NA	57300365	57192971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
Isoform_50406_3	chr4	-	4306	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-68	-2129	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGTATTTTTAAATAGC	-29	True	NA	-13	True	AATAAA	-17	NA	57300824	57192969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
Isoform_50407_6	chr4	-	2311	2	FSM	ENSMUSG00000052117.6	ENSMUST00000063816.6	2830	2	492	27	492	-27	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCAACTTTGTCTTT	715	False	NA	NA	False	AATGAA	-20	NA	57915805	57908509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_57910612_57915596
Isoform_50409_1710	chr4	-	543	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	120	388	120	-388	multi-exon	FALSE	canonical	3	4612	junction_4	90.890043459116	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCCTGATGTGTTTT	-1	True	NA	-7	True	AATAAA	-21	NA	57956291	57943760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
Isoform_5041_604	chr11	-	615	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	22	0	22	0	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497838	29495845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
Isoform_50411_52	chr4	-	673	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	-9	387	-9	-387	multi-exon	FALSE	canonical	3	4612	junction_4	90.890043459116	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTGATGTGTTTTA	0	True	NA	-6	True	AATAAA	-22	NA	57956420	57943759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
Isoform_50413_314	chr4	-	580	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	84	387	84	-387	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTGATGTGTTTTA	7	True	NA	-6	True	AATAAA	-22	NA	57956327	57943759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
Isoform_5042_127	chr6	+	543	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-38	-34	-38	34	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	122433824	122434367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122433800_122434400
Isoform_50421_10	chr4	-	3587	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	115.15288750179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	0	True	NA	-5	True	AATAAA	-22	NA	58553293	58435254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553133
Isoform_50422_12	chr4	-	3476	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	115	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	115.15288750179	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	NA	False	NA	-10	True	AATAAA	-17	NA	58553783	58435259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553729
Isoform_50424_47	chr4	-	3420	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	87	5	41	-5	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	-1	True	NA	-10	True	AATAAA	-17	NA	58553270	58435259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
Isoform_5043_3726	chr11	-	543	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	248	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	3726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497861	29495845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
Isoform_50431_15	chr4	-	3335	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	119	-3	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGATGTGTGGTTCTGGT	NA	False	NA	-8	True	AATAAA	-19	NA	58553779	58435257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
Isoform_50433_33	chr4	-	3315	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-125	3	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	5	True	NA	-2	True	AATAAA	-25	NA	58553753	58435251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
Isoform_5044_63	chr11	-	593	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	198	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497911	29495845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
Isoform_50444_7	chr4	-	2806	22	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	-15	35029	-15	-1234	5prime_fragment	TRUE	canonical	3	80	junction_21	19.3609935840689	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAACAAACAAGGCAAGC	-37	True	NA	NA	False	AATAGA	-14	NA	58912764	58833939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
Isoform_50446_6	chr4	-	2259	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	39	-2	39	2	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGTGCCTTCTCTTA	-3	True	NA	NA	False	NA	NA	NA	58987080	58965436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_50447_31	chr4	-	1203	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	8	1085	8	-1085	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCATCTGTGATAGAGA	-6	True	NA	-12	True	AATAAA	-17	NA	58987111	58966523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_50448_129	chr4	-	1175	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	41	1080	41	-1080	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGTGATAGAGAATGAA	-1	True	NA	-7	True	AATAAA	-22	NA	58987078	58966518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
Isoform_50450_3	chr4	-	2647	12	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6773	36	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.11681719253465	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTATGGGGTCTTCA	NA	False	NA	NA	False	AATAAA	-8	NA	59117886	59081095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
Isoform_50453_3	chr4	-	3596	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	189	-490	189	490	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCCAAGGTTGTGAGTT	220	False	NA	NA	False	AAAACA	-8	NA	59438444	59314192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_50454_4	chr4	-	3238	15	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	244	490	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	22.6805679661094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCCAAGGTTGTGAGTT	-4	True	NA	NA	False	AAAACA	-8	NA	59438389	59314192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_50455_11	chr4	-	2415	14	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	267	14532	267	-5	5prime_fragment	FALSE	canonical	3	63	junction_6	11.6248051456597	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATGATTTGCATTT	19	True	NA	NA	False	NA	NA	NA	59438366	59329214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
Isoform_50459_4	chr4	-	6625	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	57	173	7	7	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTGTGTAGTGCATGGT	12	False	NA	-9	True	ATTAAA	-12	NA	59549307	59472040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_50460_3	chr4	-	3532	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	-5	3328	-5	63	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATTTTGTCCACCCCT	NA	False	NA	0	True	AATACA	-15	NA	59549369	59475195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
Isoform_50461_58	chr4	-	3207	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	3	27	3	-27	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAACAAACAAAAA	-25	True	NA	NA	False	NA	NA	NA	59783863	59769663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
Isoform_50463_62	chr4	-	1558	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	20	1659	3	1	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTTGTAAGGATCCTG	-8	True	NA	-5	True	ATTAAA	-19	NA	59783846	59771295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
Isoform_50467_42	chr4	-	3102	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-31	-1633	-1	-27	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAACAAACAAAAA	-1	True	NA	NA	False	NA	NA	NA	59783839	59769663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
Isoform_50469_29	chr4	-	1498	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-59	-1	-1	1	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTTGTAAGGATCCTG	-29	True	NA	-5	True	ATTAAA	-19	NA	59783867	59771295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
Isoform_50471_3	chr4	-	4654	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-4	-27	intron_retention	FALSE	canonical	3	236	junction_3	37.1064534668687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAACAAACAAAAA	-32	True	NA	NA	False	NA	NA	NA	59783870	59769663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_59772460_59773915_59775550_59782253_59782335_59783727
Isoform_50472_5	chr4	-	1503	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	7	144	7	-144	multi-exon	FALSE	canonical	3	236	junction_2	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGATTGGTTATTCAGTT	7	True	NA	-5	True	NA	NA	NA	59783831	59774231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_50473_3	chr4	-	1682	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-32	4	-4	-4	multi-exon	FALSE	canonical	3	236	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCCCCTTATATAATTA	-32	True	NA	NA	False	AATAAA	-16	NA	59783870	59774091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_50474_5	chr4	-	477	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-29	1206	-1	-1206	multi-exon	FALSE	canonical	3	236	junction_2	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCTGTTGTCTGAGAT	-29	True	NA	NA	False	NA	NA	NA	59783867	59775293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_59775550_59782253_59782335_59783727
Isoform_50476_3	chr4	-	877	7	FSM	ENSMUSG00000073842.11	ENSMUST00000079697.10	927	7	46	4	46	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATATGTCTTTGTGTC	110	False	NA	NA	False	AATAAA	-17	NA	60070365	60066473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_60066723_60067509_60067556_60067719_60067822_60068164_60068276_60068900_60068975_60069732_60069867_60070204
Isoform_50478_18	chr4	-	4260	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	1	3	0	-3	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTTGTGTTCCTTTTT	6995	False	NA	-4	True	AATAAA	-43	NA	62278706	62218581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_50480_4	chr4	-	4355	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-24	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	24.801931426184	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCAGGACTGTTGTGTT	6892	False	NA	-11	True	AATAAA	-36	NA	62278809	62218588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232491_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_50481_4	chr4	-	2857	26	ISM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	-24	4534	0	-3666	5prime_fragment	FALSE	canonical	3	62	junction_16	15.6401534519326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAGGAGGAAGAGGAA	6970	False	NA	NA	False	NA	NA	NA	62278731	62223112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_50483_5	chr4	-	2271	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	70	-4	5	4	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAAAAGAAA	7000	False	NA	NA	False	NA	NA	NA	62278701	62238874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_50484_5	chr4	-	2146	4	FSM	ENSMUSG00000066151.13	ENSMUST00000131977.2	1739	4	5	-412	5	412	multi-exon	FALSE	canonical	3	72	junction_2	12.5698050899765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	7000	False	NA	NA	False	AAAAAG	-38	NA	62278701	62261961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62263815_62264293_62264379_62270669_62270783_62278606
Isoform_50485_8	chr4	-	3032	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-2230	0	2230	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAATTCACCTGTTT	2681	False	NA	NA	False	AATAAA	-12	NA	62326862	62310589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_50487_86	chr4	-	797	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	5	0	-5	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGAGACGTCCTTA	2681	False	NA	NA	False	AATAAA	-13	NA	62326862	62312824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_50488_30	chr4	-	1577	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	18	-776	1	776	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAGACTCTTTATTAT	2682	False	NA	NA	False	AATAAA	-20	NA	62326861	62312043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_50489_23	chr4	-	825	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	-11	5	-11	-5	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGAGACGTCCTTA	2653	False	NA	NA	False	AATAAA	-13	NA	62326890	62312824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
Isoform_50490_4	chr4	-	697	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	0	-43	0	-8	multi-exon	FALSE	canonical	3	31	junction_2	175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAATGTGAGACGTCC	2681	False	NA	NA	False	AATAAA	-10	NA	62326862	62312827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62313259_62320960_62321153_62326788
Isoform_50491_6	chr4	-	1337	11	FSM	ENSMUSG00000028391.17	ENSMUST00000107452.8	1437	11	0	100	0	-100	multi-exon	FALSE	canonical	3	12	junction_8	57	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381711_62382163_62382307_62387073_62387171_62389055
Isoform_50492_20	chr4	-	1447	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	1102	0	-100	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
Isoform_50493_3	chr4	-	1425	11	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	1	-100	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	58.0241329103676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389123	62371970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388969
Isoform_50494_13	chr4	-	2447	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-1	-1006	-1	4	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62389125	62370864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_50495_89	chr4	-	1350	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-12	102	-3	-102	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTGTGGCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	62389136	62371972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
Isoform_50497_3	chr4	-	1129	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	22	54	22	-54	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCATAGAACTGCGAGGG	NA	False	NA	NA	False	NA	NA	NA	62420491	62417298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62418331_62420394
Isoform_50499_38	chr4	-	1363	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-156	-1	-156	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	0	True	AGTAAA	-19	NA	62438311	62427404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_5050_5	chr11	-	3055	12	ISM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	101418	-1	-6995	0	3prime_fragment	FALSE	canonical	3	489	junction_6	72.7146579968806	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	30068354	30049394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290
Isoform_50500_398	chr4	-	1219	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438168	62427405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_50502_25	chr4	-	1401	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-194	-1	-194	1	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCCTCTTCCTGCC	NA	False	NA	0	True	AGTAAA	-19	NA	62438349	62427404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
Isoform_50504_4	chr4	-	2066	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-267	6	-267	-6	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGACTCATACAATG	NA	False	NA	-5	True	AATAAA	-16	NA	62443572	62440891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_50505_40	chr4	-	1775	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	24	6	-6	-6	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGACTCATACAATG	NA	False	NA	-5	True	AATAAA	-16	NA	62443281	62440891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_50509_33	chr4	-	652	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	0	1153	0	533	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTCTTCCCAGGCT	NA	False	NA	-11	True	AATAAA	-19	NA	62443305	62442038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_5051_3	chr11	-	3120	12	ISM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	101353	-1	-7060	0	3prime_fragment	FALSE	canonical	3	489	junction_6	72.7146579968806	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	30068419	30049394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290
Isoform_50511_43	chr4	-	628	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	24	1153	-6	533	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTCTTCCCAGGCT	NA	False	NA	-11	True	AATAAA	-19	NA	62443281	62442038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_50512_6	chr4	-	1981	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-185	9	-185	-9	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGATGACTCATACA	NA	False	NA	-8	True	AATAAA	-13	NA	62443490	62440894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
Isoform_50513_3	chr4	-	2204	8	ISM	ENSMUSG00000039158.12	ENSMUST00000035724.5	5387	22	26315	1	4164	-1	3prime_fragment	FALSE	canonical	3	30	junction_5	4.59369576880387	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCTGTGGCTGTGCTGTG	NA	False	NA	NA	False	AATAAA	-37	NA	63295276	63285362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067
Isoform_50514_3	chr4	-	5266	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7343	-16	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCCCCAAAGCTACC	NA	False	NA	NA	False	AATAAA	-22	NA	63328934	63285377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
Isoform_50515_7	chr4	-	4086	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	-77	7	-37	-7	multi-exon	FALSE	canonical	3	12	junction_3	10.7826000023147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGGGGGCCAGTGTT	4441	False	NA	-14	True	AATAAA	-11	NA	63414265	63333153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_50516_9	chr4	-	2549	4	ISM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-66	3371	-66	-3	5prime_fragment	FALSE	canonical	3	35	junction_2	7.71722460186015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGTTTCTGGTTGTTT	4412	False	NA	NA	False	TTTAAA	-40	NA	63414294	63353040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_63353800_63379518_63379645_63390886_63391106_63412849
Isoform_50517_14	chr4	-	2101	4	FSM	ENSMUSG00000039137.19	ENSMUST00000133425.2	797	4	-1304	0	-72	0	multi-exon	FALSE	canonical	3	16	junction_1	15.1070255914995	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGTAATGAAACTCACT	4406	False	NA	NA	False	AATAAA	-15	NA	63414300	63378399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_63378705_63379518_63379645_63390886_63391106_63412849
Isoform_50518_4	chr4	-	2414	3	FSM	ENSMUSG00000039137.19	ENSMUST00000140720.2	872	3	-1385	-157	-71	157	multi-exon	FALSE	canonical	3	35	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	4407	False	NA	NA	False	NA	NA	NA	63414299	63378899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_63379645_63390886_63391106_63412849
Isoform_50519_7	chr4	-	5692	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	-10	6165	-10	2	multi-exon	TRUE	canonical	3	146	junction_29	30.4796025702355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTCTGTCCTCAC	NA	False	NA	-2	True	AATAAA	-17	NA	70328690	70141257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_5052_3	chr11	-	3474	14	ISM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	99100	-5	-9313	4	3prime_fragment	FALSE	canonical	3	489	junction_6	68.124755034574	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTAGCCGGTGTTTTTC	8242	False	NA	-3	True	ATTAAA	-19	NA	30070672	30049390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529
Isoform_50520_12	chr4	-	1069	10	ISM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	0	135904	0	46126	5prime_fragment	FALSE	canonical	3	146	junction_2	17.5632894357085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAATTGCTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	70328680	70270996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
Isoform_50526_64	chr4	-	3718	20	FSM	ENSMUSG00000008305.19	ENSMUST00000072695.13	3644	20	-75	1	-13	-1	multi-exon	FALSE	canonical	3	132	junction_8	62.2917361117158	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119169	72036042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50529_7	chr4	-	3582	18	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	72.7398549984141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119172	72036043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_5053_3	chr11	-	3720	15	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	-12	30331	-12	-27168	5prime_fragment	FALSE	canonical	3	341	junction_12	30.1015288783863	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAGATCGACAATTAT	1808	False	NA	NA	False	NA	NA	NA	30148269	30087115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
Isoform_50531_17	chr4	-	3678	20	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_14	71.8026303733495	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119132	72036042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50534_14	chr4	-	3452	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119126	72036043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50536_9	chr4	-	3509	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-26	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119182	72036042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50538_28	chr4	-	2169	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-783	39376	-16	-1	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119172	72075817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50539_161	chr4	-	2108	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-41	0	-10	0	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119140	72075816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_5054_3	chr11	-	2348	13	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	3	32511	3	-29348	5prime_fragment	FALSE	canonical	3	341	junction_10	27.1644937781329	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGAGAAGATCCTGTC	1823	False	NA	NA	False	NA	NA	NA	30148254	30089295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
Isoform_50540_32	chr4	-	2162	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-95	0	-38	0	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119194	72075816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_50542_152	chr4	-	728	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	8	5	8	-5	multi-exon	FALSE	canonical	3	402	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAAGTAGTTCTTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	75196534	75195595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_75196007_75196217
Isoform_50545_5	chr4	-	4928	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	3	3832	3	1477	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	82777907	82720806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
Isoform_50546_5	chr4	-	3311	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	116	5336	-3	-27	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGTGTTATTGTTG	NA	False	NA	NA	False	TATAAA	-25	NA	82777794	82722310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
Isoform_50548_42	chr4	-	2724	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	0	6107	0	12	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTGAACTACAGACTT	NA	False	NA	NA	False	AATAAA	-35	NA	83242492	83144643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_50551_8	chr4	-	4097	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-14	4748	-14	1371	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAAAAATTAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	83242506	83143284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_50554_8	chr4	-	1820	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	-21	5	-5	-5	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCACAAATTCAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	83242497	83158051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_50558_6	chr4	-	904	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	-69	7	-3	-7	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTAATGCTCTATT	NA	False	NA	NA	False	AATAAA	-9	NA	83242495	83177441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
Isoform_50560_30	chr4	-	3261	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-12	2	-12	-2	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTATTAGTAAGTTATT	NA	False	NA	-6	True	ATTAAA	-14	NA	83404708	83373918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_50562_17	chr4	-	1887	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	2	9	2	-9	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTGATTTTTA	NA	False	NA	85	True	AATAAA	-10	NA	83404693	83380116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_50563_9	chr4	-	1957	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	5	11	5	-11	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404685	83380118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_50564_22	chr4	-	2975	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	34	6202	28	-11	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404662	83380118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_50579_3	chr4	-	1341	3	NIC	ENSMUSG00000028492.14	novel	1716	4	NA	NA	2	-167	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAACATTCA	NA	False	NA	NA	False	NA	NA	NA	86457352	86363044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_86364055_86405976_86406157_86457201
Isoform_50580_7	chr4	-	3953	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	21	2184	-15	-2184	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGGCACTAACGGTT	NA	False	NA	-38	True	AATAAA	-25	NA	86530271	86499275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_50581_19	chr4	-	3721	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	6	2431	0	-2431	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTACCATTGTGG	NA	False	NA	-12	True	TATAAA	-14	NA	86530286	86499522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_50582_5	chr4	-	6152	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	6	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	24.1993672437938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530286	86497091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_50583_4	chr4	-	3566	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	1	-2432	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTACCATTGTG	NA	False	NA	-13	True	TATAAA	-13	NA	86530291	86499523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
Isoform_50586_117	chr4	-	1688	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	66	134	-8	-134	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTGGTCTGAGCAG	NA	False	NA	-14	True	AATAAA	-22	NA	86588231	86574935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_50587_4	chr4	-	1827	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	61	0	-13	0	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATGTTGTTACATGT	NA	False	NA	NA	False	AAGAAA	-42	NA	86588236	86574801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_50589_13	chr4	-	1928	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	-176	136	-176	-136	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTGTGTGGTCTGAGC	NA	False	NA	-16	True	AATAAA	-20	NA	86588473	86574937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
Isoform_5059_5	chr11	-	720	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	147	-4	147	4	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTGTTGCCTAATAG	NA	False	NA	NA	False	AATAAA	-19	NA	30599440	30455986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
Isoform_50595_3328	chr4	-	831	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	45	2	-13	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	3328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86772898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
Isoform_50597_717	chr4	-	868	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	8	2	8	-2	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775641	86772898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
Isoform_5060_5	chr11	-	683	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	181	-1	181	1	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTACTGTTGCCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	30599406	30455989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
Isoform_50607_4	chr4	-	870	3	FSM	ENSMUSG00000044303.7	ENSMUST00000107131.2	895	3	91	-66	91	-4	multi-exon	FALSE	canonical	2	3	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGATTTTTAGCATAG	NA	False	NA	-7	True	AATAAA	-22	NA	89212799	89192711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_89193012_89194881_89195223_89212570
Isoform_50608_4	chr4	-	1364	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	15	11	15	-11	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAAACAGTGAAGTT	NA	False	NA	NA	False	AAGAAA	-7	NA	89229261	89224546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_89225552_89228902
Isoform_5061_3	chr11	-	1909	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-208	831	-25	146	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGTCTCACTTCAT	NA	False	NA	-18	True	GATAAA	-11	NA	30904360	30881604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
Isoform_50610_3	chr4	-	3349	6	NIC	ENSMUSG00000008489.19	novel	3797	7	NA	NA	4	-344	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	91260302	91139349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
Isoform_50612_81	chr4	-	2082	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	24	1	-6	-1	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445009	94388318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
Isoform_50614_4	chr4	-	2003	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	-18	122	-18	-122	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATATGAAGACTTGATACT	NA	False	NA	-3	True	AATAAA	-14	NA	94445051	94388439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
Isoform_50615_3	chr4	-	1992	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	109.846483785327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATATCTTTTGCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	94445002	94388316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_94389654_94409298_94409373_94437355_94437432_94439501_94439703_94444698
Isoform_50616_3	chr4	-	2037	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	114.767972448763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445041	94388319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_94389654_94409298_94409373_94438658_94438744_94439501_94439703_94444698
Isoform_50617_7	chr4	-	1918	4	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	128.416855937563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGATATCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	94445006	94388318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444698
Isoform_50618_5	chr4	-	464	2	FSM	ENSMUSG00000028578.9	ENSMUST00000153294.2	2075	2	-35	1646	-5	-1646	multi-exon	FALSE	canonical	3	294	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAATGCTGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	94445038	94439578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94439703_94444698
Isoform_50621_291	chr4	-	2761	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	22	1	22	-1	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGAGGTTTTCCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	94491459	94457404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
Isoform_50627_10	chr4	-	4800	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-2	-2014	-2	361	multi-exon	TRUE	canonical	3	626	junction_12	53.7532164993284	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATACACACATCTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	94491483	94455389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
Isoform_5063_9	chr11	-	1320	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	-6	1	-6	-1	multi-exon	FALSE	canonical	3	30	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTAAGTGTCATTTC	NA	False	NA	NA	False	AATAAA	-32	NA	30936356	30926707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_30927747_30929564_30929601_30936111
Isoform_50630_3	chr4	-	2551	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	29	4840	4	145	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCATAAAACTCTAAACT	NA	False	NA	NA	False	TATAAA	-16	NA	94867308	94835116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
Isoform_50633_3	chr4	-	3628	8	ISM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	38316	1	-7746	-1	3prime_fragment	FALSE	canonical	1	2	junction_7	8.97161055320433	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTTACGATTTCTTT	NA	False	NA	-12	True	ATTAAA	-14	NA	98667458	98643135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500
Isoform_50636_8	chr4	-	1315	10	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-122	128043	31	-1548	5prime_fragment	FALSE	canonical	3	117	junction_1	10.3171916936948	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTCAATGCTAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	99009121	98953537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
Isoform_50639_31	chr4	-	791	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	28	1987	-24	-58	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTGTATATGCCTG	NA	False	NA	0	True	AATAAA	-31	NA	99717395	99655625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
Isoform_5064_6	chr11	-	1270	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-9	-243	7	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTCTAAGTGTCATTT	NA	False	NA	NA	False	AATAAA	-31	NA	30936343	30926708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_30927747_30936111
Isoform_50640_5	chr4	-	578	7	NIC	ENSMUSG00000028549.18	novel	716	8	NA	NA	21	-75	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	78.2206636524021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717402	99655642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99702294_99702338_99717319
Isoform_50642_27	chr4	-	4872	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	34	0	-22	0	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	-7	True	AATAAA	-17	NA	101122445	101009563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
Isoform_50647_4	chr4	-	1931	4	NNC	ENSMUSG00000035201.16	novel	1976	4	NA	NA	-29797	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTACTTCTCACTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	101731017	101692154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_101693139_101694021_101694595_101695022_101695337_101730957
Isoform_50648_7	chr4	-	2633	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	-5	-1715	-5	1715	multi-exon	FALSE	canonical	3	233	junction_2	115.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGATGGTCCTTCATGA	NA	False	NA	NA	False	NA	NA	NA	101750991	101745501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_101747741_101747885_101748198_101750909
Isoform_50649_113	chr4	-	900	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	10	3	10	-3	multi-exon	FALSE	canonical	3	233	junction_2	115.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTTCTTCTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	101750976	101747219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_101747741_101747885_101748198_101750909
Isoform_50651_11	chr4	-	1380	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	-1	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTTCTTCTTGATG	NA	False	NA	-3	True	ATTAAA	-25	NA	101760887	101747217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_101747741_101747885_101748198_101760342
Isoform_50652_3	chr4	-	1049	2	NIC	ENSMUSG00000046133.4	novel	913	3	NA	NA	10	1	intron_retention	FALSE	canonical	3	233	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTCTTCTTGATGTT	NA	False	NA	-1	True	ATTAAA	-27	NA	101750976	101747215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_101748198_101750909
Isoform_50653_4	chr4	-	1971	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9761	1206	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTGTTTGTTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101828485	101823443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_101824980_101825125_101825438_101828362
Isoform_50656_9	chr4	-	4246	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-13	3736	-13	-3736	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAACAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	104967100	104890806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
Isoform_50659_8	chr4	-	3274	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	238	9	238	-9	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTCAGAGGCTGCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	106321288	106299534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
Isoform_5066_10	chr11	-	3402	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-50	588	-50	91	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTCCTTGTGTGATT	NA	False	NA	-22	True	AGTAAA	-19	NA	31320124	31307894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
Isoform_50660_20	chr4	-	2775	4	FSM	ENSMUSG00000025418.8	ENSMUST00000054472.4	2756	4	-29	10	-29	-10	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAAAGGTCACCTTT	NA	False	NA	NA	False	NA	NA	NA	106349509	106340662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106342643_106343780_106344036_106345175_106345268_106349061
Isoform_50661_13	chr4	-	2057	8	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1445	-400	1445	-1	3prime_fragment	FALSE	canonical	1	5	junction_3	4.52656557650139	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGTTCTACCAGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	106472990	106448106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
Isoform_50663_231	chr4	-	2073	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	46	2	3	2	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	-1	True	ATTAAA	-39	NA	106536095	106519454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_50664_6	chr4	-	2520	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	52	-451	-1	451	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	106536089	106519001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_50665_5	chr4	-	2182	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	-63	2	-63	2	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	-1	True	ATTAAA	-39	NA	106536204	106519454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_50667_6	chr4	-	2527	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	46	-452	3	452	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	106536095	106519000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_50668_8	chr4	-	2544	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-10	1	intron_retention	FALSE	canonical	3	276	junction_3	16.3893067272536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536108	106519455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_106520429_106522852_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
Isoform_5067_41	chr11	-	3349	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2	589	2	90	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTCCTTGTGTGAT	NA	False	NA	-23	True	AGTAAA	-18	NA	31320072	31307895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
Isoform_50671_21	chr4	-	2734	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	6	2949	3	-113	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACGTCAGTGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	106657037	106604700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_50672_9	chr4	-	2983	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	25	2681	22	-1	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGTGTGGCTTATT	NA	False	NA	NA	False	NA	NA	NA	106657018	106604432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
Isoform_50674_8	chr4	-	2459	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	12	-973	12	973	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTACTGAGTG	NA	False	NA	NA	False	NA	NA	NA	106924053	106912097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
Isoform_50675_399	chr4	-	1478	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	12	8	12	3	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	-16	True	AATAAA	-15	NA	106924053	106913078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
Isoform_50679_12	chr4	-	1565	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	200	4666	19	449	multi-exon	FALSE	canonical	3	63	junction_1	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAGGCATAGTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	107035544	106996017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
Isoform_50681_7	chr4	-	1823	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	-58	4666	-58	449	multi-exon	FALSE	canonical	3	63	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAGGCATAGTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	107035802	106996017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
Isoform_50683_31	chr4	-	1755	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	-1	1	-1	-1	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCTTTTGAATTGCAG	NA	False	NA	-6	True	AATAAA	-19	NA	107110730	107090711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
Isoform_50685_72	chr4	-	1674	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	80	1	80	-1	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCTTTTGAATTGCAG	NA	False	NA	-6	True	AATAAA	-19	NA	107110649	107090711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
Isoform_50687_3	chr4	-	1551	7	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	68	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	74.8852826365472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTGCTTTTGAATTG	NA	False	NA	-9	True	AATAAA	-16	NA	107110661	107090714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107104490_107104978_107110471
Isoform_50688_11	chr4	-	3167	5	NNC	ENSMUSG00000073779.8	novel	3078	3	NA	NA	11	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.95803989154981	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCCACCTGTGTCCCT	4033	False	NA	NA	False	NA	NA	NA	107680196	107663237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_107665162_107665182_107666035_107667959_107668144_107673123_107673265_107680130
Isoform_50689_246	chr4	-	2342	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	29	1	7	1	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	-1	True	AATAAA	-17	NA	107780778	107761178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
Isoform_50692_4	chr4	-	2428	5	NNC	ENSMUSG00000028607.17	novel	2372	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	63.0257883726971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCCTTTTTCCTT	NA	False	NA	-1	True	AATAAA	-17	NA	107780757	107761178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_107761761_107764117_107765423_107769837_107770052_107771460_107771542_107780511
Isoform_507_294	SIRV6	+	1961	1	FSM	SIRV6A	SIRV603	1969	1	1	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCATGGAAGATTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	9000	10961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV6_+_9000_11000
Isoform_50702_86	chr4	-	2617	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	22	1	-6	-1	multi-exon	TRUE	canonical	3	305	junction_7	132.795314509043	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGCTTTTACTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	107975707	107901036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
Isoform_50708_45	chr4	-	2501	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-106	-112	20	112	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTTTTCTCTG	5563	False	NA	-2	True	NA	NA	NA	108075225	108038822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_50710_3	chr4	-	3915	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-139	-1493	-13	1493	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCATCCCTTTTCTT	5530	False	NA	-3	True	NA	NA	NA	108075258	108037441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_50711_7	chr4	-	2470	13	NIC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	-9	114	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	23.8692910568277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTACTTTTCTCTGTG	5534	False	NA	0	True	NA	NA	NA	108075254	108038820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_108039111_108040844_108040943_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_50714_7	chr4	-	2252	11	ISM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	-26	5153	-26	-5153	5prime_fragment	FALSE	canonical	1	26	junction_5	16.8110082981361	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTTGTTTTTTATTT	5517	False	NA	NA	False	NA	NA	NA	108075271	108044283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
Isoform_50717_9	chr4	-	2599	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-27	6119	-27	5623	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTCTGATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	108158320	108093039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_50718_3	chr4	-	5551	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-41	3181	-41	-3181	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCTGGGTTTTGTGTA	NA	False	NA	-4	True	AATAAA	-18	NA	108158334	108090101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_50719_8	chr4	-	5504	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	6	3181	6	-3181	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCTGGGTTTTGTGTA	NA	False	NA	-4	True	AATAAA	-18	NA	108158287	108090101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_5072_3	chr11	-	1885	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-80	2135	-80	-1456	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACTGGGTCACAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	31320154	31309441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
Isoform_50720_4	chr4	-	2467	12	ISM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	6	11746	6	-4	5prime_fragment	FALSE	canonical	1	32	junction_6	24.3177994872239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108158287	108098666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
Isoform_50721_5	chr4	-	790	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-189	-8	-189	8	multi-exon	FALSE	canonical	3	46	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTGGAATCTCTTTT	NA	False	NA	-3	True	AATAAA	-14	NA	108240735	108224965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108225239_108234543_108234684_108240358
Isoform_50722_11	chr4	-	709	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-107	-9	-107	9	multi-exon	FALSE	canonical	3	46	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGGAATCTCTTTTT	NA	False	NA	-2	True	AATAAA	-15	NA	108240653	108224964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108225239_108234543_108234684_108240358
Isoform_50724_137	chr4	-	1015	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	251	23	14	-23	multi-exon	FALSE	canonical	3	159	junction_2	16.5	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTAGCCCGTGGAAAC	NA	False	NA	-34	True	AATAAA	-17	NA	108263907	108257609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108258195_108260397_108260660_108263739
Isoform_50725_230	chr4	-	1482	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	34	0	34	0	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436499	108422066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
Isoform_50727_119	chr4	-	1504	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	10	2	10	1	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGGCTTTTTGTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	108436523	108422068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
Isoform_50728_12	chr4	-	2161	4	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	51	80677	51	-78884	5prime_fragment	FALSE	canonical	3	17	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAGTAAAAACAAAAA	685	False	NA	NA	False	NA	NA	NA	108637944	108575339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_108577010_108581003_108581110_108584652_108584743_108637649
Isoform_50731_4	chr4	-	2753	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	-1642	-388	-9	274	multi-exon	FALSE	canonical	3	58	junction_5	429.740852142311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690770	108673640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902
Isoform_50732_22	chr4	-	1313	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-9	-271	-9	271	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	108690770	108673643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
Isoform_50733_7	chr4	-	2545	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-20	-1492	-20	-931	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAGATATTTCCTCT	NA	False	NA	-32	True	AATAAA	-25	NA	108690781	108672422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
Isoform_50735_161	chr4	-	951	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	41	2149	-9	274	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690770	108673640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_50736_83	chr4	-	2160	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	50	931	0	-931	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAGATATTTCCTCT	NA	False	NA	-32	True	AATAAA	-25	NA	108690761	108672422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_50737_5	chr4	-	2282	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-41	900	-41	-900	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTGTCTTTTCTATT	NA	False	NA	-1	True	AATAAA	-43	NA	108690852	108672391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_50739_18	chr4	-	2645	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	31	465	-19	-465	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGCATTTTGATCACA	NA	False	NA	-24	True	AATAAA	-17	NA	108690780	108671956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_5074_212	chr11	-	1358	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	34	2	34	-2	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTGACGATCTTTC	NA	False	NA	-31	True	AATAAA	-20	NA	31621851	31615182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
Isoform_50741_5	chr4	-	1028	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-39	2152	-39	271	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	108690850	108673643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
Isoform_50744_6	chr4	-	919	6	NNC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-634	274	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	429.345268985231	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108691445	108673640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108691411
Isoform_50746_8	chr4	-	2616	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	6	512	6	-2	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATATGTTTCTTTCA	NA	False	NA	-8	True	CATAAA	-18	NA	108975213	108918853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_50748_6	chr4	-	2835	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	32	4	-4	-4	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATATGTTTCTTT	NA	False	NA	-10	True	CATAAA	-16	NA	109059437	108918855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
Isoform_50749_114	chr4	-	2580	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	20	4	6	1	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTCTTTCATTG	NA	False	NA	-5	True	CATAAA	-21	NA	108975213	108918850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
Isoform_50753_39	chr4	-	2793	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	38	-423	0	-1	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATATGTTTCTTTCAT	NA	False	NA	-7	True	CATAAA	-19	NA	109059431	108918852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
Isoform_50755_44	chr4	-	2605	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-3	1459	-3	342	multi-exon	FALSE	canonical	3	201	junction_2	15	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTGAAGTTGTGCCAT	NA	False	NA	-11	True	AGTAAA	-10	NA	109333875	109309753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_109311620_109314094_109314265_109333306
Isoform_50758_3	chr4	-	2815	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-12	1258	-12	543	multi-exon	FALSE	canonical	3	201	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAACTGAGTGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	109333884	109309552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_109311620_109314094_109314265_109333306
Isoform_5076_10	chr11	-	2248	3	FSM	ENSMUSG00000044502.17	ENSMUST00000109415.2	799	3	-146	-1303	12	-3	multi-exon	FALSE	canonical	3	591	junction_1	17	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTTGACGATCTTT	NA	False	NA	-32	True	AATAAA	-19	NA	31621873	31615183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_31616934_31619243_31619369_31621500
Isoform_50761_7	chr4	-	2508	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	-1402	0	415	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	7258	False	NA	NA	False	ATTAAA	-22	NA	109523971	109518072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_109518824_109522214
Isoform_50762_53	chr4	-	2058	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	413	0	413	0	multi-exon	FALSE	canonical	3	20	junction_2	1	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	7256	False	NA	NA	False	ATTAAA	-22	NA	109523973	109518072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_109518824_109522214_109522355_109522806
Isoform_50763_3	chr4	-	1421	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-20	223	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110209126	110063332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
Isoform_50764_7	chr4	-	1392	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-29	2398	-29	224	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	110209135	110063331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
Isoform_50765_41	chr4	-	1877	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-10	1303	-10	-1303	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTCTTTCTTTAAA	NA	False	NA	-6	True	AATAAA	-13	NA	114844448	114817835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
Isoform_50767_44	chr4	-	1842	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-10	1338	-10	-1338	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGCTTGCTTTTTCAAT	NA	False	NA	-41	True	AATAAA	-26	NA	114844448	114817870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
Isoform_5077_472	chr11	-	2086	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	73	706	-5	266	multi-exon	FALSE	canonical	3	148	junction_6	11.6770786871831	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4640	False	NA	-3	True	AATATA	-15	NA	32217634	32182668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
Isoform_50771_28	chr4	-	2511	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	195	1121	-4	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874928	115854986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_50772_13	chr4	-	3606	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	220	1	-9	-1	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAGAGTGAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115874903	115853866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
Isoform_50774_42	chr4	-	2232	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	43	164	43	-1	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGTGCGTGCCTT	NA	False	NA	-7	True	AGTAAA	-16	NA	115911030	115890202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_50775_75	chr4	-	2209	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	65	165	65	-2	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115911008	115890203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_50777_4	chr4	-	1530	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	16	893	16	172	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGCCTGCAGTTGGG	NA	False	NA	-26	True	AATAAA	-18	NA	115911057	115890931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
Isoform_50778_7	chr4	-	613	4	FSM	ENSMUSG00000063882.13	ENSMUST00000134760.2	579	4	-36	2	1	-1	multi-exon	FALSE	canonical	3	10	junction_2	488.184618993903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTTGTCCTTCCTTTG	7658	False	NA	-9	True	AATAAA	-15	NA	115932267	115924163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115924370_115927059_115927222_115927864_115927955_115932112
Isoform_50779_428	chr4	-	509	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	37	1	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7694	False	NA	-8	True	AATAAA	-16	NA	115932231	115924162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
Isoform_50783_185	chr4	-	2721	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	14	45	-12	14	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACTGAGGCCTGGGAA	NA	False	NA	-41	True	NA	NA	NA	115980868	115954157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
Isoform_50784_92	chr4	-	2699	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	14	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACTGAGGCCTGGGAA	NA	False	NA	-41	True	NA	NA	NA	115980868	115954157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
Isoform_50787_3	chr4	-	5712	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-19	12	-19	-12	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGAAACCATCTTGGC	8468	False	NA	-15	True	AATACA	-3	NA	116321399	116163971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_50788_7	chr4	-	2377	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-19	14602	-19	1069	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCTCTGGGAGGA	8468	False	NA	NA	False	NA	NA	NA	116321399	116178561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
Isoform_50789_3	chr4	-	525	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-7	456	-6	-456	multi-exon	TRUE	canonical	3	51	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCCGTCCTAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	116413139	116410607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116410927_116411964_116412101_116413069
Isoform_5079_12	chr11	-	2710	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	73	82	-5	9	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGGCTGAGACTTGGG	4640	False	NA	NA	False	GATAAA	-21	NA	32217634	32182044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
Isoform_50793_161	chr4	-	2532	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	0	0	0	3prime_fragment	FALSE	canonical	3	774	junction_12	215.450595691155	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484690	116458805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_50794_47	chr4	-	3090	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	-558	0	1	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGTTCTGGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	116484690	116458247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_50797_13	chr4	-	1560	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	1	557	1	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484693	116458805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_50798_5	chr4	-	2115	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	4	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGTTCTGGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	116484690	116458247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
Isoform_5081_8	chr11	-	2743	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	0	264	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTGTGTATGTG	4616	False	NA	-5	True	AATATA	-13	NA	32217658	32182670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
Isoform_50811_1037	chr4	-	1367	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	53	0	53	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508824	116493706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
Isoform_50812_195	chr4	-	1400	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	20	0	20	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508857	116493706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
Isoform_50818_30	chr4	-	1876	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	156	-44	-156	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAACTTTGTTTGCCTGTT	NA	False	NA	-3	True	AATACA	-30	NA	116565529	116559631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_50819_9	chr4	-	2386	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	72	-352	-46	352	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGGAAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	116565531	116559123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_50824_4	chr4	-	1548	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	16	542	16	-542	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTTGCTAGTTATGAA	NA	False	NA	NA	False	NA	NA	NA	116565587	116560017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
Isoform_50825_213	chr4	-	2043	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	47	0	13	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1986	False	NA	0	True	TTTAAA	-42	NA	116664790	116661198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
Isoform_50828_5	chr4	-	1996	8	NNC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	257	0	intron_retention	FALSE	canonical	2	4	junction_7	42.0500188065672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2288	False	NA	0	True	TTTAAA	-42	NA	116664488	116661198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664409
Isoform_50829_12	chr4	-	2046	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	-2	1	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTATTTCTTATCG	2029	False	NA	1	True	TTTAAA	-43	NA	116664747	116661197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
Isoform_50830_8	chr4	-	2130	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	4	-1	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	1943	False	NA	-1	True	TTTAAA	-41	NA	116664833	116661199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
Isoform_50831_3	chr4	-	2098	7	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	103	junction_2	12.737739202857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2021	False	NA	0	True	TTTAAA	-42	NA	116664755	116661198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663957_116664664
Isoform_50832_4	chr4	-	2285	7	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	9	-1	intron_retention	FALSE	canonical	3	103	junction_2	12.4822095622352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	1982	False	NA	-1	True	TTTAAA	-41	NA	116664794	116661199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116662253_116662328_116662492_116662682_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
Isoform_50833_3	chr4	-	2223	7	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	24	0	intron_retention	FALSE	canonical	3	105	junction_6	10.8883219807074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1997	False	NA	0	True	TTTAAA	-42	NA	116664779	116661198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116662253_116662328_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
Isoform_50835_128	chr4	-	1185	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	53	251	-3	1	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCATGTTCTTTTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	116851557	116847412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_50836_4	chr4	-	1475	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	12	2	12	-2	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCGGCTCCTTTGTTC	NA	False	NA	-10	True	NA	NA	NA	116851598	116847163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_50837_6	chr4	-	1442	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	48	-1	-1	1	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTTTGTTCCTT	NA	False	NA	-7	True	NA	NA	NA	116851562	116847160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
Isoform_50838_4	chr4	-	1124	9	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	116.039594535658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATGTTCTTTTGTAAAG	NA	False	NA	-16	True	AATAAA	-19	NA	116851557	116847410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584_116850665_116850781_116850895_116851527
Isoform_50839_100	chr4	-	2435	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-58	1	-58	-1	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3161	False	NA	1	True	AATAAA	-14	NA	116991218	116985852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_50840_23	chr4	-	2464	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-89	3	-89	-1	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAAGGCCTTATCAT	3130	False	NA	-1	True	AATAAA	-12	NA	116991249	116985854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_50841_146	chr4	-	2374	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	3	1	3	-1	multi-exon	TRUE	canonical	3	135	junction_10	17.1138146846699	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGCCTTATCATTC	3222	False	NA	1	True	AATAAA	-14	NA	116991157	116985852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
Isoform_50849_527	chr4	-	694	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	159	7	0	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117013281	117011030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_50850_31	chr4	-	812	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	39	9	39	-2	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTCTAGGTGTTTGG	NA	False	NA	-22	True	AATAAA	-21	NA	117013401	117011032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_50851_486	chr4	-	718	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	130	12	-29	-5	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTGTCTAGGTGTT	NA	False	NA	-25	True	AATAAA	-18	NA	117013310	117011035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
Isoform_50859_85	chr4	-	2777	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	47	18	0	-18	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAGAAAAAAAACA	NA	False	NA	70	True	NA	NA	NA	117039789	117016853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
Isoform_50860_5	chr4	-	2332	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	14	496	14	8	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTCTTCCCCTCCCCA	NA	False	NA	1	True	AATAAA	-19	NA	117039822	117017331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
Isoform_50862_3	chr4	-	992	5	FSM	ENSMUSG00000028678.14	ENSMUST00000141675.8	1009	5	12	5	12	-5	multi-exon	FALSE	canonical	3	445	junction_2	14.142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGGAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	117039777	117031609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
Isoform_50864_11	chr4	-	2615	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	414.939332915066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146395
Isoform_50865_12	chr4	-	2632	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	400.454354452539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9553	False	NA	NA	False	ATTAAA	-9	NA	117146660	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146399
Isoform_50867_43	chr4	-	1795	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	291	-3	-42	3	3prime_fragment	TRUE	canonical	0	0	junction_5	318.755914977798	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9861	False	NA	NA	False	ATTAAA	-9	NA	117146352	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
Isoform_50868_10	chr4	-	2098	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	-12	-3	-12	3	intron_retention	FALSE	canonical	0	0	junction_5	318.755914977798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9558	False	NA	NA	False	ATTAAA	-9	NA	117146655	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
Isoform_50870_214	chr4	-	1952	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	343.341753942045	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146395
Isoform_50872_341	chr4	-	1948	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	4	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
Isoform_50876_55	chr4	-	3095	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-9	NA	117354243	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
Isoform_50880_23	chr4	-	1739	10	ISM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	207875	6	-64	3	3prime_fragment	FALSE	canonical	0	0	junction_5	365.792425790136	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9839	False	NA	NA	False	ATTAAA	-9	NA	117146374	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
Isoform_50881_41	chr4	-	1874	11	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	375.814528723944	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
Isoform_50882_105	chr4	-	1870	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	357.390878451032	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	9574	False	NA	NA	False	ATTAAA	-9	NA	117146639	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
Isoform_50884_29	chr4	-	3023	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	0	6	0	3	multi-exon	FALSE	canonical	0	0	junction_5	470.113273367088	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTGCTGTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-9	NA	117354249	117128665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
Isoform_50888_3	chr4	-	2342	3	NNC	ENSMUSG00000028677.20	novel	458	2	NA	NA	13	1929	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAACCTGCCTTGTAAA	NA	False	NA	-7	True	AATAAA	-11	NA	117354236	117345502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_117346335_117346374_117347528_117353879
Isoform_50890_50	chr4	-	1532	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	34	0	14	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539436	117531877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
Isoform_50891_41	chr4	-	1541	11	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_10	51.6295458047037	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539434	117531877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
Isoform_50892_113	chr4	-	2298	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	11	3	0	-3	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCCCTTGTCTGTCTG	NA	False	NA	-12	True	AGTAAA	-14	NA	117740673	117730330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_50893_37	chr4	-	2405	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	27	-120	16	10	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGGGAGAAAGTTTTAT	NA	False	NA	-8	True	AATAAA	-26	NA	117740657	117730207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
Isoform_50896_3	chr4	-	2327	8	FSM	ENSMUSG00000028541.15	ENSMUST00000106421.9	1801	8	-355	-171	9	0	multi-exon	FALSE	canonical	1	1	junction_6	24.2630146014674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740664	117730327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738903_117738972_117739015_117740298
Isoform_50897_13	chr4	-	2531	2	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	2	-7	2	0	intron_retention	FALSE	canonical	3	2592	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744515	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117741839_117742300
Isoform_50898_13	chr4	-	2191	3	FSM	ENSMUSG00000033379.14	ENSMUST00000152356.2	560	3	-1512	-119	8	0	multi-exon	FALSE	canonical	3	2551	junction_2	20.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744509	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117741839_117742300_117742492_117742825
Isoform_50899_16	chr4	-	2072	4	FSM	ENSMUSG00000033379.14	ENSMUST00000133530.8	646	4	-1422	-4	4	0	multi-exon	FALSE	canonical	3	2536	junction_3	23.6690139681023	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744513	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000
Isoform_50901_46	chr4	-	1506	7	ISM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	21	4	12	0	intron_retention	FALSE	canonical	3	2536	junction_3	83.3979749287848	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117744505	117741526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786
Isoform_50903_471	chr4	-	975	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	21	4	12	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117744505	117741526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
Isoform_50905_31	chr4	-	1045	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744515	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
Isoform_50906_12	chr4	-	1098	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744568	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
Isoform_50907_11	chr4	-	1949	5	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2536	junction_3	20.8386659841747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744520	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472
Isoform_50908_13	chr4	-	1704	6	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	2536	junction_3	44.6739297577457	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744505	117741522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472_117743557_117743786
Isoform_50912_194	chr4	-	2279	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	12	264	0	0	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749217	117746103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
Isoform_50914_15	chr4	-	2279	6	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	27.9399355761605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTTCTCTTTATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	117749229	117746104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748917
Isoform_50915_5	chr4	-	2463	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	7	-2	intron_retention	FALSE	canonical	3	66	junction_1	6.75925291729789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749210	117746105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117746874_117746951_117747129_117747214_117748316_117748511_117748625_117748906
Isoform_50916_6	chr4	-	2767	3	NIC	ENSMUSG00000028540.7	novel	2558	4	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	66	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749232	117746105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117746874_117746951_117748625_117748906
Isoform_50917_7	chr4	-	2372	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	70	junction_2	5.11737237261468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749232	117746103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
Isoform_50918_8	chr4	-	3509	20	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	17.6376266140367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772196	117751688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117751855_117751940_117752043_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
Isoform_50920_51	chr4	-	3585	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	4	6	4	-6	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772192	117751688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
Isoform_50921_4	chr4	-	3801	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	-209	3	-209	-3	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCTGCCTCCTTTCTC	NA	False	NA	-3	True	AGTAAA	-16	NA	117772405	117751685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
Isoform_50922_12	chr4	-	2151	8	NIC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	3674	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.2004486865448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCCTGTTGTTTTCTC	3722	False	NA	-3	True	AATAAA	-16	NA	117821971	117789352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526
Isoform_50924_18	chr4	-	2642	13	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	23.5914297056273	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1877	False	NA	-1	True	AATAAA	-18	NA	117992096	117789350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_50925_3	chr4	-	2287	13	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	24.0801612674556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGTTGTTTTCTCT	1887	False	NA	-2	True	AATAAA	-17	NA	117992086	117789351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
Isoform_50926_9	chr4	-	2590	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.3545438866066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1881	False	NA	-1	True	AATAAA	-18	NA	117992092	117789350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
Isoform_50927_3	chr4	-	2242	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.8084728187943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1886	False	NA	0	True	AATAAA	-19	NA	117992087	117789349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
Isoform_50928_12	chr4	-	2092	7	ISM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	170078	1	3644	-1	3prime_fragment	FALSE	canonical	3	57	junction_3	12.0473602456675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGCCTCCTGTTGTT	3692	False	NA	-8	True	AATAAA	-11	NA	117822001	117789357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526
Isoform_50929_12	chr4	-	2014	7	ISM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	170156	1	3722	-1	3prime_fragment	FALSE	canonical	3	57	junction_3	12.0473602456675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGGCCTCCTGTTGTT	3770	False	NA	-8	True	AATAAA	-11	NA	117821923	117789357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526
Isoform_50930_7	chr4	-	1963	10	ISM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	80136	-3	-22872	3	3prime_fragment	FALSE	canonical	3	55	junction_9	13.0592193440704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTTTCTCTGACT	3244	False	NA	2	True	AATAAA	-21	NA	117911951	117789347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846
Isoform_50931_40	chr4	-	2554	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1881	False	NA	-1	True	AATAAA	-18	NA	117992092	117789350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_50932_24	chr4	-	2581	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-34	2	-10	-2	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCCTGTTGTTTTCTC	1852	False	NA	-3	True	AATAAA	-16	NA	117992121	117789352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
Isoform_50933_10	chr4	-	2218	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	10	-3	10	-1	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGTTGTTTTCTCT	1872	False	NA	-2	True	AATAAA	-17	NA	117992101	117789351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
Isoform_50934_10	chr4	-	2566	12	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	22.3118394987545	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCCTGTTGTTTT	1850	False	NA	-6	True	AATAAA	-13	NA	117992123	117789355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
Isoform_50936_3	chr4	-	2616	13	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	29.4291758105607	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1886	False	NA	0	True	AATAAA	-19	NA	117992087	117789349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117953439_117953506_117964745_117964891_117991586
Isoform_50938_31	chr4	-	2548	11	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	21.0437639218843	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1840	False	NA	0	True	AATAAA	-19	NA	117992133	117789349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
Isoform_50939_9	chr4	-	2220	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	-71	-6	-39	0	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1823	False	NA	-1	True	AATAAA	-18	NA	117992150	117789350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
Isoform_50940_9	chr4	-	2517	11	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	25.6142538442954	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1850	False	NA	-7	True	AATAAA	-12	NA	117992123	117789356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
Isoform_50941_37	chr4	-	4537	22	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_21	14.8531740730846	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTGCATTACCTTGT	NA	False	NA	-9	True	TATAAA	-15	NA	118036871	117994201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
Isoform_50942_51	chr4	-	4638	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	24	1	24	-1	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGACTGTGGTCTGCCC	NA	False	NA	-2	True	AATAAA	-15	NA	118037216	117994154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
Isoform_50945_4	chr4	-	2047	8	ISM	ENSMUSG00000033295.15	ENSMUST00000124758.2	4808	25	23534	-2	-1741	2	3prime_fragment	FALSE	canonical	3	420	junction_6	39.1798573822034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATCAAAAAAA	7118	False	NA	NA	False	NA	NA	NA	118069679	118066204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523
Isoform_50946_4	chr4	-	2839	14	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	68021	795	-5704	2	3prime_fragment	TRUE	canonical	3	396	junction_13	40.6675073473425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118080581	118066204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422
Isoform_50947_4	chr4	-	4830	23	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	56314	795	925	2	3prime_fragment	FALSE	canonical	3	357	junction_20	52.6746014352613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118092288	118066204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155
Isoform_50948_4	chr4	-	6845	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	16	795	16	2	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118148586	118066204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
Isoform_5095_8109	chr11	-	1274	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	131	228	1	-4	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	8109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCACTGTTTCTATTT	NA	False	NA	-37	True	AATAAA	-16	NA	33113075	33102514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
Isoform_50950_700	chr4	-	1783	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	10	0	10	0	multi-exon	TRUE	canonical	3	1043	junction_4	200.755117703013	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294539	118290097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
Isoform_50952_150	chr4	-	1810	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	-17	0	-17	0	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294566	118290097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
Isoform_50958_3	chr4	-	2114	12	ISM	ENSMUSG00000033191.15	ENSMUST00000047421.6	4091	23	10156	-1	9850	1	3prime_fragment	TRUE	canonical	0	0	junction_2	0.962091385841669	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTGTGTCTGCACTT	NA	False	NA	NA	False	AATAAA	-15	NA	118337102	118328386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_118328790_118329768_118329869_118329988_118330086_118330164_118330206_118331306_118331378_118331496_118331611_118332620_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058_118336350_118336809
Isoform_50959_3	chr4	-	1782	2	FSM	ENSMUSG00000050854.10	ENSMUST00000150044.2	717	2	5	-1070	5	-6	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCTGTCTGCACC	9096	False	NA	NA	False	AATAAA	-17	NA	118400154	118398143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_118399569_118399797
Isoform_50960_3	chr4	-	1857	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	-5	12	-5	-12	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGCTGTAGTTCTGTC	8320	False	NA	NA	False	AATAAA	-11	NA	118400930	118398149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
Isoform_50961_12	chr4	-	1568	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	11	9	11	-6	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGAACCTGTGTACTT	NA	False	NA	-7	True	AGTAAA	-10	NA	119031381	119026718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119028240_119031334
Isoform_50962_5	chr4	-	1071	4	ISM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-2	-462	-2	372	intron_retention	FALSE	canonical	3	375	junction_1	15.4344492037203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTGTCTTTCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	119089884	119083206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550
Isoform_50963_133	chr4	-	773	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6353	-2	187	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGTTTTGCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_50964_59	chr4	-	956	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6170	-2	370	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCATTTGTCTTTCTTTG	NA	False	NA	-8	True	NA	NA	NA	119089884	119083208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_50965_3	chr4	-	4999	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-2	-2102	intron_retention	FALSE	non_canonical	3	18	junction_1	144.668448529733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	119089884	119079140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_119079545_119079569_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_50967_3	chr4	-	1233	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	16	5902	-11	638	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCTGTTTTATGTGTC	NA	False	NA	NA	False	NA	NA	NA	119089893	119082940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
Isoform_50991_8214	chr4	-	1516	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	104	8	0	1	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	8214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAATGTCTAGTTTTG	NA	False	NA	NA	False	AATAAA	-8	NA	119151697	119135185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
Isoform_51004_231	chr4	-	1528	8	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	262	junction_2	3531.96674123986	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAATGTCTAGTTTTG	NA	False	NA	NA	False	AATAAA	-8	NA	119151697	119135185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
Isoform_51017_112	chr4	-	751	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	49	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	163.771144144263	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9631	False	NA	-3	True	AATAAA	-19	NA	119177694	119157206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_51018_9	chr4	-	831	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	-31	0	-31	0	multi-exon	FALSE	canonical	2	32	junction_8	163.771144144263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9551	False	NA	-3	True	AATAAA	-19	NA	119177774	119157206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_51019_34	chr4	-	768	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-11	0	2	0	multi-exon	TRUE	canonical	2	32	junction_8	169.629516415942	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9633	False	NA	-3	True	AATAAA	-19	NA	119177692	119157206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_51020_13	chr4	-	1298	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	-11	1	2	-1	multi-exon	FALSE	canonical	2	32	junction_8	172.260640876149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTACCTTGTCTAGCCT	9633	False	NA	-3	True	NA	NA	NA	119177692	119164357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
Isoform_51021_14	chr4	-	1845	9	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGGTGTTAGTAATT	9744	False	NA	NA	False	NA	NA	NA	119272697	119209444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
Isoform_51023_163	chr4	-	1381	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	60	2	-2	-2	multi-exon	FALSE	canonical	3	273	junction_2	22	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGGGTTTCTGGTTTT	5565	False	NA	-6	True	AATAAA	-28	NA	119279557	119275728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119276491_119278776_119278881_119279042
Isoform_51024_75	chr4	-	1418	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	23	2	-21	-2	multi-exon	FALSE	canonical	3	273	junction_2	22	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCGGGTTTCTGGTTTT	5528	False	NA	-6	True	AATAAA	-28	NA	119279594	119275728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119276491_119278776_119278881_119279042
Isoform_51026_5	chr4	-	4087	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	4	6	4	-6	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAACGTCTTCCTATGTC	9977	False	NA	-10	True	AATATA	-18	NA	119349821	119322485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
Isoform_51027_945	chr4	-	2701	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	4	0	4	0	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427469	120397064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
Isoform_51031_35	chr4	-	3477	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	303	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_18	179.180610999139	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427170	120397064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
Isoform_51035_581	chr4	-	1924	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	8	0	-2	0	multi-exon	TRUE	canonical	3	393	junction_8	23.5424491839793	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682895	120614634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
Isoform_51036_61	chr4	-	2017	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-85	0	-84	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682988	120614634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
Isoform_51044_12	chr4	-	2001	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-10	5	2	1	multi-exon	FALSE	canonical	3	95	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTGACTTGATGTTT	NA	False	NA	-14	True	AATAAA	-17	NA	120782212	120778397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120779894_120781707
Isoform_51045_6	chr4	-	2346	6	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.3476589707709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACTGATTTACAGATT	6847	False	NA	NA	False	NA	NA	NA	120808885	120787335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804485_120804767_120806528_120806758_120808640
Isoform_51047_6	chr4	-	2350	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	11	1	11	-1	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACTGATTTACAGATTA	6847	False	NA	NA	False	NA	NA	NA	120808885	120787334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
Isoform_51048_185	chr4	-	2877	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	19	9	19	-9	multi-exon	TRUE	canonical	3	186	junction_3	19.2841007882109	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCTTTTTGCTCGGCT	NA	False	NA	-11	True	AATAAA	-12	NA	120874425	120825522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
Isoform_51051_3	chr4	-	2749	9	NIC	ENSMUSG00000032870.9	novel	2905	10	NA	NA	13	-9	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	71.7207039494176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCTTTTTGCTCGGCT	NA	False	NA	-11	True	AATAAA	-12	NA	120874431	120825522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120873945
Isoform_51054_48	chr4	-	3385	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	44	0	44	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955394	120916433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
Isoform_51055_50	chr4	-	3248	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	181	0	181	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955257	120916433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
Isoform_51061_15	chr4	-	2130	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-27	4139	-27	-4139	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCCAAGCACTACTTGG	6437	False	NA	NA	False	TTTAAA	-45	NA	121072308	121007218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
Isoform_51067_4	chr4	-	6257	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6449	False	NA	-1	True	AATAAA	-18	NA	121072296	121003079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
Isoform_51068_5	chr4	-	3266	7	ISM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	7	6802	7	-6802	5prime_fragment	FALSE	canonical	3	168	junction_3	17.3557547292598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	6471	False	NA	NA	False	NA	NA	NA	121072274	121009881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
Isoform_51074_377	chr4	-	2552	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	54	14	3	-14	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779650	122752853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
Isoform_51078_250	chr4	-	2533	13	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	229.274580652399	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779650	122752853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779625
Isoform_51079_33	chr4	-	2607	13	NIC	ENSMUSG00000028656.15	novel	2737	13	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	229.274580652399	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779718	122752847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779625
Isoform_5108_1154	chr11	-	1156	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	2	-1	1	1	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATGTATGTGACAAT	NA	False	NA	-21	True	AATAAA	-16	NA	33113075	33104925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
Isoform_51081_32	chr4	-	2739	13	NIC	ENSMUSG00000028656.15	novel	2737	13	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	229.274580652399	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGTTATTCACCTGATG	NA	False	NA	-16	True	AATAAA	-16	NA	122779851	122752848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779625
Isoform_51082_925	chr4	-	2561	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	199	8	3	-8	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779650	122752847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_51083_69	chr4	-	2615	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	145	8	0	-8	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779704	122752847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_51084_36	chr4	-	2756	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	-2	14	-2	-14	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779851	122752853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
Isoform_51087_612	chr4	-	2536	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	187	14	3	-14	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779650	122752853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
Isoform_51088_48	chr4	-	2737	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	-14	14	-2	-14	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTAGTTATTCACC	NA	False	NA	-21	True	AATAAA	-11	NA	122779851	122752853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
Isoform_51089_85	chr4	-	2596	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	133	8	0	-8	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779704	122752847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
Isoform_51093_16	chr4	-	1247	10	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	304.035816603534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033734	123020909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_51096_711	chr4	-	1178	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	10	0	10	0	multi-exon	TRUE	canonical	3	832	junction_9	90.3078411481501	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033734	123020907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_51097_65	chr4	-	1165	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	309.335169215497	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCTCCTGCAAG	NA	False	NA	-17	True	AATAAA	-22	NA	123033732	123020910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
Isoform_51098_16	chr4	-	2370	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-2	intron_retention	FALSE	canonical	3	832	junction_8	93.9161860384034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033734	123020909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033694
Isoform_51099_12	chr4	-	2363	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	100	junction_8	324.369388198085	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033734	123020908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033702
Isoform_51101_37	chr4	-	2058	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	7	-148	-7	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123236744	123206444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_51102_4	chr4	-	3301	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	-1236	-148	1236	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	123236744	123205201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_51103_13	chr4	-	2124	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-148	-59	-148	59	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTCCTGGGCCTGAC	NA	False	NA	NA	False	AGTAAA	-21	NA	123236744	123206378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
Isoform_51104_5	chr4	-	2025	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-148	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	123236744	123206446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
Isoform_51105_3	chr4	-	1881	4	ISM	ENSMUSG00000028649.22	ENSMUST00000154824.8	2808	13	11348	1	5430	-1	3prime_fragment	FALSE	canonical	3	282	junction_1	9.03081145609604	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTAATTCTTGGCT	NA	False	NA	-9	True	ATTAAA	-17	NA	123254812	123243509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702
Isoform_51106_3	chr4	-	2212	13	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-1994	-750	combination_of_known_junctions	FALSE	canonical	3	206	junction_8	30.7187058465829	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	123268154	123244262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107
Isoform_51107_3	chr4	-	4340	32	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-22	29980	-22	-15322	5prime_fragment	FALSE	canonical	2	9	junction_7	14.3626292741619	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATAGTTGGGTCCCC	7063	False	NA	NA	False	AATATA	-36	NA	123558567	123380121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
Isoform_51110_5	chr4	-	1836	3	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-78	87074	-78	-4543	5prime_fragment	FALSE	canonical	3	50	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAACCAAACAA	7007	False	NA	NA	False	NA	NA	NA	123558623	123437215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_123438625_123448096_123448159_123558258
Isoform_51111_17	chr4	-	546	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	45	8	40	-8	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTAGTCTGTTTGCTT	1893	False	NA	-33	True	AATAAA	-9	NA	123611934	123606510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123606720_123609656_123609875_123611815
Isoform_51112_6	chr4	-	510	3	FSM	ENSMUSG00000028648.14	ENSMUST00000137312.2	350	3	-1	-159	-1	0	multi-exon	FALSE	canonical	3	29	junction_2	1039.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1852	False	NA	-25	True	AATAAA	-17	NA	123611975	123606502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123606720_123609656_123609875_123611900
Isoform_51113_8	chr4	-	527	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	1318	junction_2	395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1830	False	NA	-25	True	AATAAA	-17	NA	123611997	123606502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123606720_123609656_123609875_123611905
Isoform_51114_522	chr4	-	2170	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	84	798	-30	-798	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCTTCTTGATGCTGT	NA	False	NA	-12	True	AATAAA	-21	NA	123644054	123629149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
Isoform_51115_36	chr4	-	2346	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	65	641	-49	-641	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGTTTGTTTCATCG	NA	False	NA	NA	False	ATTAAA	-19	NA	123644073	123628992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
Isoform_51119_126	chr4	-	994	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	6	603	6	34	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGATGTCTTTCTATGA	NA	False	NA	NA	False	NA	NA	NA	124587387	124572555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_51121_33	chr4	-	1148	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	6	449	6	188	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	124587387	124572401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_51122_3	chr4	-	1041	7	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	0	-14	intron_retention	FALSE	canonical	3	1259	junction_3	145.347189706425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTTGGTCTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	124587393	124572603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_124572780_124573494_124573606_124575985_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
Isoform_51125_15	chr4	-	752	3	FSM	ENSMUSG00000078570.11	ENSMUST00000125776.8	761	3	2	7	2	-3	multi-exon	FALSE	canonical	3	59	junction_2	71	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGTGACTGACCTTT	7726	False	NA	-10	True	ATTAAA	-13	NA	124744452	124743285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124743756_124744024_124744227_124744372
Isoform_51126_21	chr4	-	1195	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	34	-6	34	1	multi-exon	FALSE	canonical	3	65	junction_2	68	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGACCTTTCTTTTCTGT	7223	False	NA	-1	True	ATTAAA	-22	NA	124744955	124743276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124743756_124744024_124744227_124744441
Isoform_51127_22	chr4	-	730	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	24	8	24	-3	multi-exon	FALSE	canonical	3	65	junction_2	68	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGTGACTGACCTTT	7679	False	NA	-10	True	ATTAAA	-13	NA	124744499	124743285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124743756_124744024_124744227_124744441
Isoform_51128_4	chr4	-	2559	5	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.589892258425	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAGCAATATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	124756022	124749033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425_124755769_124755992
Isoform_51129_501	chr4	-	1583	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	44	-1	0	1	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGGTCATCTGCATTC	NA	False	NA	-9	True	AATAAA	-27	NA	124830666	124812256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
Isoform_51130_11	chr4	-	2310	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1430	junction_5	130.355283744082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCTCGGTCATCTGCAT	NA	False	NA	-11	True	AATAAA	-25	NA	124830700	124812258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
Isoform_51131_11	chr4	-	2427	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	11	-14	intron_retention	FALSE	canonical	3	1430	junction_5	130.887117395105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTAAGTCAGTCCT	NA	False	NA	-24	True	AATAAA	-12	NA	124830699	124812271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_124812824_124813405_124813493_124814051_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
Isoform_51138_5	chr4	-	720	2	FSM	ENSMUSG00000086342.2	ENSMUST00000143705.2	620	2	-97	-3	-97	3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGTGCATTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	124978837	124976646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124976857_124978327
Isoform_51139_15	chr4	-	2788	6	FSM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	-46	13	-46	-13	multi-exon	FALSE	canonical	2	13	junction_5	0.748331477354788	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAAGCTATTG	NA	False	NA	NA	False	NA	NA	NA	125021679	125012228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_125013938_125014118_125014226_125014664_125014900_125016046_125016187_125020398_125020876_125021559
Isoform_51143_12	chr4	-	2370	16	FSM	ENSMUSG00000073758.11	ENSMUST00000097891.4	2384	16	13	1	13	-1	multi-exon	FALSE	canonical	2	5	junction_2	4.1505019776729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCAGTCTGGTCCTTGTG	1151	False	NA	-1	True	AGTAAA	-20	NA	126057271	126044395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126055968_126056060_126056245_126056365_126056594_126056659_126056758_126056917_126057017
Isoform_51144_5	chr4	-	1890	12	FSM	ENSMUSG00000073758.11	ENSMUST00000094760.9	1859	12	-41	10	-2	-4	multi-exon	FALSE	canonical	2	5	junction_2	4.41260403618604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTCAGGCCAGTCTG	1962	False	NA	-10	True	AGTAAA	-11	NA	126056460	126044404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126056245
Isoform_51151_180	chr4	-	4351	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6787	False	NA	-5	True	AATAAA	-26	NA	126096440	126057876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_51157_91	chr4	-	4263	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	113	2	0	-2	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6787	False	NA	-5	True	AATAAA	-26	NA	126096440	126057876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
Isoform_51161_23	chr4	-	3838	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	237.221554913761	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6787	False	NA	-5	True	AATAAA	-26	NA	126096440	126057876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_51163_12	chr4	-	3748	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	257.145950775041	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6787	False	NA	-7	True	AATAAA	-24	NA	126096440	126057878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126096362
Isoform_51164_18	chr4	-	3657	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	255.6	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACTGTGTTTGTTGCT	6785	False	NA	-5	True	AATAAA	-26	NA	126096442	126057876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126088109_126088198_126096362
Isoform_51193_25	chr4	-	3272	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	-25	2	-19	-2	multi-exon	FALSE	canonical	3	86	junction_13	57.8802606030247	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150095	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51196_9	chr4	-	3282	18	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	3	52	junction_13	63.2753635019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150114	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51197_62	chr4	-	3161	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150095	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51198_13	chr4	-	3195	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	-2	2	-2	-2	multi-exon	FALSE	canonical	3	46	junction_12	60.9301598143317	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150138	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51199_20	chr4	-	3368	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	-19	2	-19	-2	multi-exon	FALSE	canonical	3	86	junction_12	56.4079726191254	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150095	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51200_15	chr4	-	3361	17	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	52	junction_12	62.4189474438652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150097	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51201_11	chr4	-	3318	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTACGTGTCCTTGGA	NA	False	NA	-4	True	AATAAA	-17	NA	126150158	126125963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51202_46	chr4	-	3257	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150095	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51203_15	chr4	-	3250	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACGTGTCCTTGGATC	NA	False	NA	-2	True	AATAAA	-19	NA	126150097	126125961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
Isoform_51205_408	chr4	-	1639	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	25	8	25	-3	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7101	False	NA	NA	False	AATAAA	-12	NA	126215471	126209847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
Isoform_51207_6	chr4	-	1749	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	306	junction_2	36.0416425818802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7078	False	NA	NA	False	AATAAA	-20	NA	126215494	126209839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126210659_126211095_126211197_126211512_126211985_126212191_126212289_126215234
Isoform_51208_13	chr4	-	1955	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	26	-2	intron_retention	FALSE	canonical	3	286	junction_2	42.9418211071678	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCAGCATGTCCTGTTC	7102	False	NA	NA	False	AATAAA	-13	NA	126215470	126209846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126210659_126211095_126211698_126211776_126211985_126212191_126212289_126215234
Isoform_51209_66	chr4	-	2056	4	FSM	ENSMUSG00000042558.17	ENSMUST00000128188.8	1826	4	-225	-5	11	0	multi-exon	FALSE	canonical	3	330	junction_1	27.3901847788988	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7087	False	NA	NA	False	AATAAA	-20	NA	126215485	126209839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126210659_126211095_126211985_126212191_126212289_126215234
Isoform_51210_6	chr4	-	2257	3	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	14	2	intron_retention	FALSE	canonical	3	330	junction_1	28	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATGTCCTGTTCCTGT	7090	False	NA	NA	False	AATAAA	-17	NA	126215482	126209842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126210659_126211095_126212289_126215234
Isoform_51211_8	chr4	-	2485	3	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	10	-4	intron_retention	FALSE	canonical	3	386	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCCAGCATGTCCTGT	7086	False	NA	NA	False	AATAAA	-11	NA	126215486	126209848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126211985_126212191_126212289_126215234
Isoform_51213_3	chr4	-	3172	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	2	12421	2	424	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGTAAAGAAAAATTGA	2366	False	NA	NA	False	NA	NA	NA	126323347	126238945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
Isoform_51214_3	chr4	-	7269	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-46	4	-46	-4	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCAGTCTGTTTTTT	NA	False	NA	-24	True	TATAAA	-22	NA	126362422	126328808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
Isoform_51217_20	chr4	-	3695	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-20	6	-2	-6	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTTGTGGTCTGCC	NA	False	NA	-7	True	NA	NA	NA	126647222	126637548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
Isoform_51218_6	chr4	-	3336	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	14	-975	3	-6	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTTGTGGTCTGCC	NA	False	NA	-7	True	NA	NA	NA	126647217	126637548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
Isoform_51219_5	chr4	-	1680	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-92	53007	-92	2	5prime_fragment	FALSE	canonical	3	222	junction_3	34.4141443789226	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATTTA	NA	False	NA	NA	False	NA	NA	NA	126862020	126808738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
Isoform_51226_6	chr4	-	3066	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	-27	-57	1	8	multi-exon	FALSE	canonical	3	10	junction_1	144.172515708488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954944	126941377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
Isoform_51228_6	chr4	-	3423	8	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	2	13	junction_7	138.51633661848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954928	126941383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954703
Isoform_51230_281	chr4	-	3345	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	17	490	-11	9	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTTTTGTTTGTTGGA	NA	False	NA	NA	False	ATTAAA	-29	NA	126954928	126941376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
Isoform_51236_7	chr4	-	3214	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-4	7	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	141.739981029427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTTTTGTTTGTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	126954949	126941378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
Isoform_51239_734	chr4	-	1602	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	20	1	20	-1	multi-exon	FALSE	canonical	3	984	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127222934	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127220565_127222868
Isoform_51240_159	chr4	-	1683	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	-61	1	-61	-1	multi-exon	FALSE	canonical	3	984	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127223015	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127220565_127222868
Isoform_51241_769	chr4	-	1848	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	31	1	31	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224606	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127220565_127224294
Isoform_51242_1167	chr4	-	1655	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	224	1	224	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224413	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127220565_127224294
Isoform_51243_76	chr4	-	1879	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	0	1	0	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224637	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127220565_127224294
Isoform_5125_17	chr11	-	3607	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-22	1416	-22	-1416	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCACATGTTTCAAGT	NA	False	NA	-6	True	TATAAA	-41	NA	33463768	33163210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_51251_26	chr4	-	1445	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	4504	False	NA	-10	True	AATAAA	-17	NA	127247874	127244878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127246275_127247825
Isoform_51252_4	chr4	-	2747	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	-1302	0	1302	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTGTGAGCCTCGTG	4504	False	NA	NA	False	NA	NA	NA	127247874	127243576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127246275_127247825
Isoform_51253_360	chr4	-	1317	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	17	387	17	-387	multi-exon	FALSE	canonical	3	573	junction_1	0	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTCCTTTGGGTCTT	421	False	NA	-7	True	AATAAA	-21	NA	127251957	127248988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_127250167_127251818
Isoform_51254_4	chr4	-	5309	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	56	-1	0	1	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACATTTTGTATTTC	NA	False	NA	-5	True	NA	NA	NA	128503835	128477338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
Isoform_51256_3	chr4	-	3467	8	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_2	6.72794962246664	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCTTTACAAATGCTG	NA	False	NA	NA	False	AATACA	-16	NA	128503825	128479167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
Isoform_51257_12	chr4	-	2071	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	-2	-6	1	6	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCTTCAGTGGAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	128856234	128825808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
Isoform_51258_4	chr4	-	2841	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	0	-778	0	778	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAAACTGTTATTATTT	NA	False	NA	NA	False	CATAAA	-16	NA	128856232	128825036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
Isoform_51259_3	chr4	-	1699	9	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCAGTGGAATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	128856232	128825807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855998_128856093
Isoform_5126_5	chr11	-	3148	20	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-22	84779	-22	-180	5prime_fragment	FALSE	canonical	3	105	junction_6	31.5999053261319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTACTCTATGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	33463768	33246573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
Isoform_51260_3	chr4	-	4379	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	48	-1	4	1	multi-exon	FALSE	canonical	3	32	junction_6	60.2301142840246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1236	False	NA	-4	True	AATAAA	-16	NA	129083287	129041796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
Isoform_51261_19	chr4	-	4342	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	1	3	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1105	False	NA	-2	True	AATAAA	-18	NA	129083418	129041794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
Isoform_51263_7	chr4	-	4235	6	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	-9	3	intron_retention	FALSE	canonical	3	52	junction_5	57.9931030382062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1095	False	NA	-2	True	AATAAA	-18	NA	129083428	129041794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083334
Isoform_51265_22	chr4	-	2801	2	ISM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	5190	6	4759	-6	3prime_fragment	FALSE	canonical	3	262	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTGACTGCTGT	5565	False	NA	-6	True	ATTAAA	-22	NA	129116514	129113376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_129115271_129115607
Isoform_5127_109	chr11	-	2519	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-11	-3	-11	3	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	-4	True	AATAAA	-18	NA	34724479	34700013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
Isoform_51272_11	chr4	-	5080	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-49	2	-49	-2	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	129133016	129113372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
Isoform_51273_14	chr4	-	1230	7	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	30	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	393.876743269882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2522	False	NA	-27	True	AATAAA	-16	NA	129229133	129203307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129203670_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_51274_122	chr4	-	814	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	2	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2555	False	NA	-27	True	AATAAA	-16	NA	129229100	129203307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_51278_34	chr4	-	1977	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	15	2415	15	2	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2507	False	NA	-27	True	AATAAA	-16	NA	129229148	129203307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_51279_344	chr4	-	1953	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	39	2415	39	2	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2531	False	NA	-27	True	AATAAA	-16	NA	129229124	129203307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_51280_9	chr4	-	2106	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	22	2279	22	138	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAAGAGAGCTTTACTC	2514	False	NA	NA	False	AATAAA	-22	NA	129229141	129203171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
Isoform_51286_300	chr4	-	2070	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	250	1	250	-1	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	129271659	129247421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_51287_88	chr4	-	2223	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	97	1	97	-1	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	129271812	129247421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_51289_28	chr4	-	2364	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	-44	1	-44	-1	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	129271953	129247421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
Isoform_51291_8	chr4	-	2028	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3227	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	62.8191849676514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATCTTTTTCGTGACA	117	False	NA	-6	True	AATAAA	-18	NA	129268682	129247426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268592
Isoform_51292_6	chr4	-	2016	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3799	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	63.2509881345738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTCGTGACACTTTT	689	False	NA	-1	True	AATAAA	-23	NA	129268110	129247421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268037
Isoform_51294_11	chr4	-	2786	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	-5	507	-3	-3	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTGCTTGTATT	734	False	NA	-3	True	ATTAAA	-12	NA	129334616	129320064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
Isoform_51296_1663	chr4	-	1980	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	53	5	31	-5	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGCCCTGGTTGGTTT	8861	False	NA	-10	True	AATAAA	-17	NA	129436453	129409901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
Isoform_51297_682	chr4	-	2016	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	22	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8830	False	NA	-5	True	AATAAA	-22	NA	129436484	129409896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
Isoform_51308_36	chr4	-	1592	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1839	7	-74	-2	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTCTACTGCATAC	NA	False	NA	-2	True	NA	NA	NA	129450326	129442143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
Isoform_51309_12	chr4	-	2184	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	-2	3	-2	-3	multi-exon	TRUE	canonical	3	10	junction_9	59.1335510476424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTTCTACTGCATA	NA	False	NA	-3	True	NA	NA	NA	129452186	129442144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
Isoform_51314_1065	chr4	-	1086	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	17	20	-15	-20	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	1065	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTCCTTGTCAGGC	6394	False	NA	-20	True	AATAAA	-12	NA	129494424	129485772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
Isoform_51317_10	chr4	-	1255	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	137	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	35.7960891718635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCACGCCTTTAAT	NA	False	NA	-23	True	NA	NA	NA	129512877	129509414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_51319_57	chr4	-	2126	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	17	496	-2	137	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCACGCCTTTAAT	NA	False	NA	-23	True	NA	NA	NA	129512875	129509414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_5132_166	chr11	-	2128	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	-19	0	-19	0	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725352	35699207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
Isoform_51320_29	chr4	-	2631	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	38	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.0505631702531	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATGTATATAAGTATT	NA	False	NA	NA	False	NA	NA	NA	129512877	129508880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_129510010_129510040_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
Isoform_51322_7	chr4	-	479	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	12	0	-4	0	multi-exon	FALSE	canonical	3	28	junction_1	58	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	129512877	129511891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129512156_129512284_129512429_129512806
Isoform_51323_29	chr4	-	827	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	52	0	4	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517688	129513066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
Isoform_51324_10	chr4	-	2663	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	123	2061	-42	-2061	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGAACAGGGATACT	8243	False	NA	-22	True	ATTAAA	-9	NA	129534475	129521936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_51326_11	chr4	-	4694	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	157	-4	-8	-1	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGCCAATCGAATTA	8277	False	NA	-6	True	ATTAAA	-21	NA	129534441	129519871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
Isoform_51329_6	chr4	-	3472	10	NNC	ENSMUSG00000053841.16	novel	4847	10	NA	NA	-46	-1257	intron_retention	FALSE	non_canonical	0	0	junction_9	106.955627120968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTCGTGCTGATGAT	8239	False	NA	NA	False	AGTAAA	-12	NA	129534479	129521132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534047
Isoform_5133_577	chr11	-	2104	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	4	1	4	-1	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725329	35699208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
Isoform_51332_31	chr4	-	4558	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	4	7	4	-2	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTATCTCAGCCAATC	7864	False	NA	-12	True	ATTAAA	-15	NA	129534854	129519877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
Isoform_51336_113	chr4	-	4520	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	42	7	42	-2	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTATCTCAGCCAATC	7902	False	NA	-12	True	ATTAAA	-15	NA	129534816	129519877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
Isoform_51342_6	chr4	-	4758	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	42	0	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7902	False	NA	-10	True	ATTAAA	-17	NA	129534816	129519875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
Isoform_51345_165	chr4	-	2175	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	35	3500	35	4	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTATGCTTGGAT	8869	False	NA	-25	True	NA	NA	NA	129566525	129541272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_51346_34	chr4	-	5706	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	0	4	0	-4	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGTCTTCTTTGGTTT	8834	False	NA	-1	True	AATAAA	-18	NA	129566560	129537776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
Isoform_51353_14	chr4	-	1892	10	FSM	ENSMUSG00000053730.16	ENSMUST00000125445.8	1851	10	-42	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_7	9.25896295822207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTGTGTCCTGTGAT	9992	False	NA	NA	False	AAAAAG	-20	NA	129590631	129570148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586428_129586512_129586858_129587079_129587678_129587806_129590507
Isoform_51358_44	chr4	-	1808	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	1	1	1	-1	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTGTGTCCTGTGAT	9993	False	NA	NA	False	AAAAAG	-20	NA	129590630	129570148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
Isoform_51363_1398	chr4	-	2692	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	7	1039	7	-1039	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGATGAATTGT	4988	False	NA	NA	False	AATAAA	-21	NA	129636082	129608650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
Isoform_51366_29	chr4	-	2802	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	-103	1039	-96	-1039	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGATGAATTGT	4878	False	NA	NA	False	AATAAA	-21	NA	129636192	129608650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
Isoform_51377_9	chr4	-	2385	11	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	79	3	-32	-1	intron_retention	FALSE	canonical	3	205	junction_9	24.2991769407937	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068516	130059397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685
Isoform_51379_302	chr4	-	1949	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	3	0	-1	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068595	130059397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
Isoform_51380_5	chr4	-	2240	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105998.8	1976	12	-150	-114	-150	-1	multi-exon	FALSE	canonical	2	10	junction_11	72.1002516014454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130069065	130059397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694
Isoform_51381_6	chr4	-	2124	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105998.8	1976	12	-34	-114	-34	-1	multi-exon	FALSE	canonical	2	10	junction_11	72.1002516014454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130068949	130059397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694
Isoform_51382_4	chr4	-	2145	12	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	74.2817953738797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAATTACAGTGTCTGGG	NA	False	NA	NA	False	AATAAA	-11	NA	130068496	130059402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068215
Isoform_51383_4	chr4	-	1579	10	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	-313	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	81.0442646922419	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTGTCTGGGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	130063590	130059397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130063501
Isoform_51384_4	chr4	-	1868	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	9	1	9	-1	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTCCCATGTCTTGT	7805	False	NA	-2	True	AATAAA	-16	NA	130169370	130147288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
Isoform_51385_10	chr4	-	2126	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-16	3	-16	-3	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTGGGTCCAGGCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	130253752	130209178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_51386_34	chr4	-	1398	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	15	700	-12	196	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTATTCCTATAA	NA	False	NA	-10	True	CATAAA	-30	NA	130253721	130209875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_51388_11	chr4	-	1579	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	15	519	-12	377	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGCTTTCCCTTGTATT	NA	False	NA	-1	True	CATAAA	-19	NA	130253721	130209694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
Isoform_5139_3	chr11	-	986	2	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	140072	5	13099	-5	3prime_fragment	FALSE	canonical	3	308	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGCTTCTTGTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	35731282	35729231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_35730072_35731136
Isoform_51390_4	chr4	-	2041	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTCCAGGCTGATGCC	NA	False	NA	NA	False	AATAAA	-18	NA	130253721	130209174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
Isoform_51391_7	chr4	-	1369	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-14	196	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTATTCCTATAA	NA	False	NA	-10	True	CATAAA	-30	NA	130253750	130209875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
Isoform_51392_6	chr4	-	1237	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	187	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTCCAAAAAGGCTTTA	NA	False	NA	-19	True	CATAAA	-21	NA	130253748	130209884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
Isoform_51394_8	chr4	-	634	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-13	9655	combination_of_known_splicesites	FALSE	canonical	3	73	junction_4	91.6493316942355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGGTAAGAGCTGCC	NA	False	NA	-9	True	NA	NA	NA	130253749	130220993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
Isoform_51395_5	chr4	-	5041	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	11	22	11	-6	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTTTAAAAAAAAAAAAAA	5320	False	NA	NA	False	NA	NA	NA	131802621	131650745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
Isoform_51396_5	chr4	-	5168	18	FSM	ENSMUSG00000028906.18	ENSMUST00000084253.10	5141	18	-28	1	-15	-1	multi-exon	FALSE	canonical	3	49	junction_17	28.8854077694417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-4	NA	131776417	131650740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
Isoform_51399_432	chr4	-	2794	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	183	1152	-15	226	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939431	131913374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
Isoform_51402_55	chr4	-	2933	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	44	1152	44	226	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939570	131913374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
Isoform_51417_21	chr4	-	1989	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-81	2724	0	1	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1912	False	NA	-57	True	NA	NA	NA	131988913	131952980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
Isoform_51419_84	chr4	-	1854	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	70	1	-11	-1	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAACAAAAACAA	1982	False	NA	-59	True	NA	NA	NA	131988843	131952982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_5142_3	chr11	-	4449	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	79	3	79	-3	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTCTTGTCATTTGT	8196	False	NA	NA	False	AATAAA	-15	NA	35871275	35729229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
Isoform_51420_57	chr4	-	1927	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	-1	-1	-1	1	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1911	False	NA	-57	True	NA	NA	NA	131988914	131952980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_51421_3	chr4	-	2591	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	48	-714	-33	62	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGGCTGTCATGGAG	1960	False	NA	NA	False	TATAAA	-15	NA	131988865	131952267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
Isoform_51422_57	chr4	-	1877	10	NNC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	16.1528195757556	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACAAAC	1958	False	NA	-57	True	NA	NA	NA	131988867	131952980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979141_131988801
Isoform_51423_3	chr4	-	1760	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	25.6795151823394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1994	False	NA	-58	True	NA	NA	NA	131988831	131952981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131978985_131979144_131988801
Isoform_51424_8	chr4	-	1224	10	FSM	ENSMUSG00000028898.16	ENSMUST00000147652.8	1017	10	-106	-101	-1	-1	multi-exon	FALSE	canonical	3	16	junction_6	205.952229868128	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2359	False	NA	-1	True	AATAAA	-16	NA	132056806	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132055779_132055878_132056663
Isoform_51425_4	chr4	-	1132	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	242.984792476813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTGGGCTTCTTCAAC	2349	False	NA	-5	True	AATAAA	-12	NA	132056816	132039078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132056663
Isoform_51426_4	chr4	-	1119	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	220.972813655888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2361	False	NA	-4	True	AATAAA	-13	NA	132056804	132039077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132055779_132055878_132056663
Isoform_51427_71	chr4	-	1077	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	52	1	3	-1	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2368	False	NA	-1	True	AATAAA	-16	NA	132056797	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
Isoform_51428_61	chr4	-	1107	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	22	1	0	-1	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2338	False	NA	-1	True	AATAAA	-16	NA	132056827	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
Isoform_51429_13	chr4	-	1001	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2346	False	NA	-1	True	AATAAA	-16	NA	132056819	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
Isoform_51430_3	chr4	-	1035	8	NIC	ENSMUSG00000028898.16	novel	1791	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	176.968693184266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2309	False	NA	-2	True	AATAAA	-15	NA	132056856	132039075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132055779_132055878_132056663
Isoform_51431_6	chr4	-	937	7	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	188.905399605199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2310	False	NA	-1	True	AATAAA	-16	NA	132056855	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132056663
Isoform_51432_3	chr4	-	1774	8	FSM	ENSMUSG00000028898.16	ENSMUST00000146166.8	1791	8	18	-1	-4	-1	multi-exon	FALSE	canonical	3	451	junction_7	40.7315752763111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTTCTTCAACTGTA	2356	False	NA	-1	True	AATAAA	-16	NA	132056809	132039074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132053357_132055779_132055878_132056663
Isoform_51433_3	chr4	-	963	8	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	244.055865133626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGGCTTCTTCAACTG	2366	False	NA	-3	True	AATAAA	-14	NA	132056799	132039076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132052518_132052572_132052662_132052801_132053256_132053357_132055779_132055878_132056663
Isoform_51438_234	chr4	-	2270	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	6	2	2	-2	multi-exon	FALSE	canonical	3	61	junction_9	136.55039362814	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	5487	False	NA	-16	True	AATAAA	-15	NA	132073010	132059235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
Isoform_51441_1609	chr4	-	2231	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	48	6	2	-2	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	5487	False	NA	-16	True	AATAAA	-15	NA	132073010	132059235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
Isoform_51444_36	chr4	-	2493	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	NA	False	NA	-16	True	AATAAA	-15	NA	132080944	132059235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
Isoform_51449_45	chr4	-	383	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	53	1	0	0	multi-exon	FALSE	canonical	3	959	junction_1	21	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132079555_132079973_132080010_132080907
Isoform_5145_52	chr11	-	1811	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	137	1	-9	-1	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40583464	40570141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
Isoform_51452_7	chr4	-	4492	15	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	34	-2	at_least_one_novel_splicesite	TRUE	non_canonical	2	21	junction_12	24.1094443345849	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAACTGAATTTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	132149718	132083242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_132083758_132083788_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
Isoform_51453_23	chr4	-	4476	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	8	-1	3	1	multi-exon	FALSE	canonical	3	61	junction_10	11.8591268181468	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTGAATTTGTGTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	132149749	132083239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
Isoform_51455_6	chr4	-	2443	2	FSM	ENSMUSG00000066042.5	ENSMUST00000123604.2	626	2	-590	-1227	0	3	multi-exon	FALSE	canonical	3	267	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1047	False	NA	-12	True	AATAAA	-16	NA	132191232	132186038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132187425_132190175
Isoform_51456_115	chr4	-	1589	5	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.389673080969	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTGATTCTTAC	1070	False	NA	-12	True	AATAAA	-16	NA	132191209	132186038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_132186186_132186211_132186356_132186395_132187425_132190175_132190320_132191084
Isoform_51463_1423	chr4	-	3442	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	33	0	33	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	1423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237779	132219342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
Isoform_5147_10	chr11	-	1825	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	227	1	11	-1	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40585803	40570141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
Isoform_51473_984	chr4	-	459	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	74	6	10	-6	multi-exon	FALSE	canonical	3	7869	junction_2	284	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTGATGCCTTCTA	9315	False	NA	-26	True	AATAAA	-13	NA	132260896	132257871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132258135_132260606_132260699_132260792
Isoform_51474_364	chr4	-	500	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	33	6	-31	-6	multi-exon	FALSE	canonical	3	7869	junction_2	284	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTGATGCCTTCTA	9274	False	NA	-26	True	AATAAA	-13	NA	132260937	132257871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132258135_132260606_132260699_132260792
Isoform_51477_21	chr4	-	1005	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	10	-1	10	1	multi-exon	FALSE	canonical	3	7869	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	9315	False	NA	NA	False	NA	NA	NA	132260896	132259797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132260699_132260792
Isoform_5148_77	chr11	-	1790	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	262	1	46	-1	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40585768	40570141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
Isoform_51480_19	chr4	-	1795	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	47	2403	-16	1206	multi-exon	FALSE	canonical	3	48	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4091	False	NA	-9	True	ATTAAA	-21	NA	132459810	132454610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132455882_132458186_132458384_132459483
Isoform_51481_16	chr4	-	1949	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	48	9	48	-9	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGTGCAACCGTGAGG	NA	False	NA	-10	True	AATAAA	-22	NA	132484515	132460285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_51482_34	chr4	-	1967	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	70	-31	70	31	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAAGGCTCTAGTCTTT	NA	False	NA	30	True	NA	NA	NA	132484493	132460245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_51483_3	chr4	-	1131	6	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	60	-5158	intron_retention	FALSE	canonical	3	69	junction_3	10.1311401135312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGGGTCACACCGTGGAA	NA	False	NA	NA	False	CATAAA	-17	NA	132484503	132465434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
Isoform_51484_53	chr4	-	1998	7	FSM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	-11	-897	0	-1	multi-exon	FALSE	canonical	3	27	junction_1	56.674509261219	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_51487_9	chr4	-	2249	7	NIC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	60.1165534607565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570119
Isoform_51488_13	chr4	-	2117	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	76.5037013910478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570119_132570236_132570367
Isoform_51490_595	chr4	-	2001	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	35	1	0	-1	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_51491_30	chr4	-	2098	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	-62	1	-62	-1	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570542	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_51492_10	chr4	-	2114	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	35	-112	0	112	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAATACAAAAATTATCAT	NA	False	NA	NA	False	AATAAA	-12	NA	132570445	132554127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
Isoform_51494_15	chr4	-	2070	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	77.7027302333341	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTATGGTCTTGAGTC	NA	False	NA	-7	True	ATTAAA	-15	NA	132570445	132554240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132564450_132564520_132567954_132568016_132570367
Isoform_51497_51	chr4	-	2326	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	44	564	44	-564	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGTTATTTTTATGA	6137	False	NA	-12	True	AATAAA	-12	NA	132611776	132581375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_51500_3	chr4	-	2887	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	45	2	45	-2	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTTGCACTTGATT	6138	False	NA	-6	True	AATAAA	-12	NA	132611775	132580813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_51501_24	chr4	-	2378	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	-7	563	-7	-563	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6086	False	NA	-11	True	AATAAA	-13	NA	132611827	132581374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_51503_3	chr4	-	2890	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	41	3	41	-3	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTTGCACTTGAT	6134	False	NA	-7	True	AATAAA	-11	NA	132611779	132580814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
Isoform_51504_128	chr4	-	3048	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	3	2	3	-2	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132649866	132626525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_51505_4	chr4	-	3265	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-217	5	-217	-5	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCATGTTGTGATTC	NA	False	NA	-5	True	AATAAA	-14	NA	132650086	132626528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_51506_9	chr4	-	3121	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-73	5	-73	-5	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCATGTTGTGATTC	NA	False	NA	-5	True	AATAAA	-14	NA	132649942	132626528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_51512_82	chr4	-	2943	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-44	-1036	21	-2	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTGTGATTCAGT	NA	False	NA	-2	True	AATAAA	-17	NA	132649848	132626525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
Isoform_51518_7	chr4	-	1918	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	28	5	2	3	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGACTGCTTAACTGGG	NA	False	NA	-1	True	AATAAA	-15	NA	132990396	132980405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
Isoform_51519_11	chr4	-	1599	7	FSM	ENSMUSG00000028857.17	ENSMUST00000134781.8	613	7	-145	-841	7	-1	multi-exon	FALSE	canonical	3	22	junction_5	347.535609686259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCTGTCATTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	133005074	132993356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132997980_132998126_132998273_132998359_133004841
Isoform_51521_589	chr4	-	1467	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	14	3	-8	-3	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133005089	132993358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
Isoform_51522_49	chr4	-	1382	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	-8	-828	-8	-3	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133005089	132993358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
Isoform_5153_3	chr11	-	3878	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	11	3	5	-3	multi-exon	TRUE	canonical	3	534	junction_10	59.4855104336938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACACCCAATCAGTGAT	NA	False	NA	-11	True	AATAAA	-14	NA	40624238	40592224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
Isoform_51534_502	chr4	-	3960	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8978	False	NA	-6	True	ATTAAA	-15	NA	133080201	133019776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_51538_48	chr4	-	4217	17	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	112.020575676971	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGACTGGTGGCATT	8379	False	NA	-8	True	ATTAAA	-13	NA	133080800	133019778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
Isoform_51539_26	chr4	-	3918	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-235	-7	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	123.385394417474	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	4029	False	NA	-6	True	ATTAAA	-15	NA	133066870	133019776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066807
Isoform_51541_12	chr4	-	3780	15	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	129.710450698501	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8975	False	NA	-6	True	ATTAAA	-15	NA	133080204	133019776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_51543_118	chr4	-	3957	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	107.699375836425	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8978	False	NA	-6	True	ATTAAA	-15	NA	133080201	133019776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_51544_11	chr4	-	4005	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-62	-9	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	107.699375836425	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGACTGGTGGCATT	8928	False	NA	-8	True	ATTAAA	-13	NA	133080251	133019778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
Isoform_5155_10	chr11	-	1976	14	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	14	6177	8	-6177	5prime_fragment	FALSE	canonical	3	534	junction_6	64.2459217502439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGTAAGTCAGGCTA	NA	False	NA	NA	False	NA	NA	NA	40624235	40598398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
Isoform_51550_5	chr4	-	1621	2	FSM	ENSMUSG00000056596.9	ENSMUST00000125541.2	1654	2	29	4	29	-4	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGACGTGTGGTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	133225832	133218414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133219142_133224938
Isoform_51558_4573	chr4	-	1292	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	22	2	22	-2	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	4573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4482	False	NA	NA	False	ATTAAA	-17	NA	133273285	133259854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
Isoform_51559_87	chr4	-	1347	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	-35	4	-35	-4	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTCCCTCGTCT	4425	False	NA	NA	False	ATTAAA	-15	NA	133273342	133259856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
Isoform_51568_10	chr4	-	2682	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	202	1696	202	1674	multi-exon	FALSE	canonical	3	285	junction_4	22.238961949053	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTTGCTTTAGTT	NA	False	NA	-17	True	AATAAA	-18	NA	133360578	133334305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
Isoform_51570_66	chr4	-	2929	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	12	1038	12	829	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	-12	True	NA	NA	NA	133399946	133388735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
Isoform_51572_3	chr4	-	2438	5	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.0885679155544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTCTTCTTGTTTTTT	NA	False	NA	0	True	NA	NA	NA	133399950	133389562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_133390103_133391968_133393091_133395936_133396269_133397048_133397172_133399629
Isoform_51574_18	chr4	-	1819	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	0	-829	0	829	multi-exon	FALSE	canonical	3	52	junction_1	36	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	-12	True	NA	NA	NA	133399958	133388735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133390103_133397048_133397172_133399629
Isoform_51575_3	chr4	-	3305	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	30	-2345	30	478	multi-exon	FALSE	canonical	3	52	junction_1	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGGATGTCTTTTTGT	NA	False	NA	-1	True	AATACA	-22	NA	133399928	133387219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133390103_133397048_133397172_133399629
Isoform_51576_10	chr4	-	2135	3	ISM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	9	3701	9	-1834	5prime_fragment	FALSE	canonical	3	69	junction_1	27.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133399949	133391398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_133393091_133397048_133397172_133399629
Isoform_51579_34	chr4	-	2769	3	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	68195	953	35360	-20	3prime_fragment	FALSE	canonical	3	162	junction_2	10	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	4441	False	NA	NA	False	NA	NA	NA	133412727	133407271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_133409367_133411745_133411877_133412184
Isoform_51588_1129	chr4	-	3132	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	-1	4	-1	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7963	False	NA	-9	True	AATAAA	-14	NA	133615109	133574604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
Isoform_51589_61	chr4	-	3158	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	-27	4	-27	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7937	False	NA	-9	True	AATAAA	-14	NA	133615135	133574604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
Isoform_51598_848	chr4	-	1168	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	95	2	2	-2	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCTCTGATCTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	133695217	133692050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
Isoform_51600_26	chr4	-	1215	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	40	10	40	-10	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAATGCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	133695272	133692058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
Isoform_51604_8	chr4	-	1511	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	-7	1715	-7	178	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTAGCTATATGCCCG	NA	False	NA	-22	True	AATACA	-22	NA	133728208	133698053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
Isoform_51605_15	chr4	-	3143	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	54	22	35	7	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGTGTGGTAACTGCA	NA	False	NA	NA	False	AAAAAG	-28	NA	133728147	133696360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
Isoform_51607_3	chr4	-	3063	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	11	-2184	11	-1	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATACAAGGTTTGTGTG	NA	False	NA	NA	False	AAAAAG	-19	NA	133728218	133696369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
Isoform_51608_47	chr4	-	3468	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	25	12	25	-12	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTACTGGTCTCTCT	8275	False	NA	-3	True	AATAAA	-18	NA	133746127	133730652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
Isoform_51609_25	chr4	-	3526	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	-31	10	-31	-10	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTACTGGTCTCTCTGA	8219	False	NA	-1	True	AATAAA	-20	NA	133746183	133730650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
Isoform_5161_31	chr11	-	702	7	FSM	ENSMUSG00000020330.17	ENSMUST00000156399.8	1443	7	5	736	5	-736	multi-exon	FALSE	canonical	3	653	junction_3	43.8203402796261	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGGCACAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	40624238	40612465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
Isoform_51612_277	chr4	-	681	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	56	6	4	1	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	9282	False	NA	-11	True	ATTAAA	-16	NA	133856044	133854722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133855118_133855228_133855397_133855926
Isoform_51614_12	chr4	-	3832	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	57	4	-4	-4	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCCGGTTTCCTAGTG	NA	False	NA	NA	False	AATAAA	-11	NA	133914366	133857172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
Isoform_51616_7	chr4	-	2043	9	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	30	17911	3	4476	5prime_fragment	FALSE	canonical	3	365	junction_5	45.0692175991552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAGAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	133914393	133875079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
Isoform_51618_3	chr4	-	2407	21	FSM	ENSMUSG00000028841.15	ENSMUST00000030645.9	2468	21	57	4	-3	-4	multi-exon	TRUE	canonical	0	0	junction_2	2.41816045786875	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCATGTGTCTTTGCT	2963	False	NA	NA	False	AATAAA	-17	NA	133965653	133955355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133955896_133956249_133956432_133956516_133956602_133956692_133956755_133956896_133956974_133957490_133957563_133957722_133957797_133959351_133959525_133959948_133959980_133960057_133960165_133960304_133960364_133960450_133960513_133960596_133960699_133961012_133961076_133961178_133961239_133961799_133961905_133961980_133962023_133962419_133962505_133963181_133963364_133963470_133963629_133965567
Isoform_51620_89	chr4	-	1976	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	1	17	1	1	multi-exon	FALSE	canonical	3	614	junction_2	27	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAGTGTGCATGTATT	7669	False	NA	-10	True	NA	NA	NA	133972902	133970616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133972242_133972335_133972399_133972614
Isoform_51621_183	chr4	-	633	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	1	1360	1	-1342	multi-exon	FALSE	canonical	3	614	junction_2	27	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACACCTCCGATACTAA	7669	False	NA	-29	True	AATAAA	-15	NA	133972902	133971959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133972242_133972335_133972399_133972614
Isoform_51625_8	chr4	-	4500	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	5	4	2	-4	multi-exon	FALSE	canonical	3	58	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTTGAAAGTTCTCT	4296	False	NA	NA	False	AATAAA	-14	NA	134014559	134002317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134006428_134011556_134011859_134014471
Isoform_51627_4	chr4	-	4631	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	50	5	50	-4	multi-exon	FALSE	canonical	3	10	junction_2	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTTGAAAGTTCTCT	3699	False	NA	NA	False	AATAAA	-14	NA	134015156	134002317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134006428_134011556_134011859_134014937
Isoform_51629_3	chr4	-	3090	2	FSM	ENSMUSG00000050890.16	ENSMUST00000142504.2	1039	2	-24	-2027	1	2027	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAGGAAAAAAAAAA	4295	False	NA	NA	False	AATACA	-27	NA	134014560	134008857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134011859_134014471
Isoform_51631_20	chr4	-	4143	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-18	1	-18	-1	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	7005	False	NA	-1	True	AATAAA	-22	NA	134099887	134083683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
Isoform_51632_20	chr4	-	4114	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	11	1	11	-1	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	7034	False	NA	-1	True	AATAAA	-22	NA	134099858	134083683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
Isoform_51636_6	chr4	-	1974	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262367	134252876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
Isoform_51637_9	chr4	-	1438	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-15	-541	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262370	134253415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
Isoform_51638_31	chr4	-	1998	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	13	14	3	0	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGAATTTTTTTCTTG	NA	False	NA	-7	True	ATTAAA	-16	NA	134262566	134252874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
Isoform_5164_204	chr11	-	3470	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	41	1	41	-1	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTTGTTTTGGTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	40646097	40639379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
Isoform_51640_14	chr4	-	1894	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	66	9	-23	-2	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262632	134252876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
Isoform_51641_37	chr4	-	1865	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	95	9	6	-2	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262603	134252876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
Isoform_51642_61	chr4	-	1304	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	117	548	-2	-541	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262581	134253415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
Isoform_51643_20	chr4	-	1355	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	66	548	-23	-541	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262632	134253415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
Isoform_51644_3	chr4	-	4688	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	27	0	27	0	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGTATAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	134431574	134289000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
Isoform_51645_3	chr4	-	3390	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	9	1316	9	-1316	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGATTGGACTCATTGG	NA	False	NA	NA	False	AATAAA	-19	NA	134431592	134290316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
Isoform_51646_199	chr4	-	2655	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	25	3869	25	1153	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCATCACTTGGAGT	NA	False	NA	-12	True	AATAAA	-15	NA	134495310	134472733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
Isoform_51647_10	chr4	-	2469	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	4	1353	4	-1353	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCAATTTTGCCTTTT	NA	False	NA	-22	True	ATTAAA	-18	NA	134580652	134531422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
Isoform_51648_34	chr4	-	3792	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	31	3	3	-3	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTAGTTTCCTGCCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	134580625	134530072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
Isoform_5165_220	chr11	-	3426	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	84	2	84	-2	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCTTGTTTTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	40646054	40639380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
Isoform_51650_10	chr4	-	3824	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	-3	5	-3	-5	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTAGTTTCCTGCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	134580659	134530074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
Isoform_51653_4	chr4	-	1000	2	FSM	ENSMUSG00000028826.15	ENSMUST00000136113.2	1011	2	0	11	0	-11	multi-exon	FALSE	canonical	3	192	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAGAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	134580628	134564581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134565302_134580348
Isoform_51654_217	chr4	-	1174	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	28	2	19	-2	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTTCTCGTTATACC	NA	False	NA	-22	True	ATTAAA	-17	NA	134642307	134625161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
Isoform_51659_8	chr4	-	1254	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	5	-540	5	-2	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTTCTCGTTATACC	NA	False	NA	-22	True	ATTAAA	-17	NA	134642321	134625161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
Isoform_51661_289	chr4	-	4066	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	51	2	51	-2	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTTTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	135000074	134941281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
Isoform_51665_56	chr4	-	4089	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	28	2	28	-2	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTTTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	135000097	134941281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
Isoform_5167_27	chr11	-	2871	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	18	623	18	-85	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGCTTCAATCTAATC	NA	False	NA	-16	True	AATAAA	-17	NA	40646120	40640001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
Isoform_51674_39	chr4	-	3683	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	73	-604	-20	1	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080482	135047800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_51675_8	chr4	-	3755	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	1	-604	1	1	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080554	135047800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_51677_9	chr4	-	3638	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	152	7	-18	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080480	135047801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_51678_4	chr4	-	3749	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	42	6	-35	1	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080590	135047800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
Isoform_51691_7	chr4	-	1496	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	0	318	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5698	False	NA	NA	False	NA	NA	NA	135125532	135097219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
Isoform_51692_20	chr4	-	939	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.244999599936	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161103	135139618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_51693_4	chr4	-	969	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	38.7774096607806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCAGCTCATTGAGCA	NA	False	NA	-12	True	AATAAA	-14	NA	135161138	135139626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152757_135160922
Isoform_51694_13	chr4	-	5096	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161152	135139618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_51696_4	chr4	-	2428	4	FSM	ENSMUSG00000059713.13	ENSMUST00000156635.2	724	4	31	-1735	31	1735	multi-exon	FALSE	canonical	3	97	junction_1	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	135161103	135144018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135145863_135147556_135147731_135152524_135152754_135160922
Isoform_51697_11	chr4	-	2472	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	373	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCTGCAGCTTTCTTCC	4280	False	NA	-3	True	NA	NA	NA	135221842	135178823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_51698_4	chr4	-	5085	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	-8	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGAGTTCGGGTCCTG	4280	False	NA	-11	True	ATTAAA	-14	NA	135221842	135176210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_51705_33	chr4	-	2433	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	101	2619	-16	375	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCAGCTTTCTTCCTG	4289	False	NA	-1	True	NA	NA	NA	135221833	135178821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_51708_6	chr4	-	3802	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	75	1276	-42	-1276	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGATCGCTGGTAGGG	4263	False	NA	-9	True	ATTAAA	-14	NA	135221859	135177478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_51711_3	chr4	-	5067	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	84	2	-33	-2	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGGGTCCTGTGTTGC	4272	False	NA	-5	True	ATTAAA	-20	NA	135221850	135176204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
Isoform_51714_29	chr4	-	2790	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-2	1	-2	-1	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGTTTTCATGCGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	135300943	135269199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_51715_30	chr4	-	2703	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	85	1	85	-1	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGTTTTCATGCGCTT	-3	True	NA	-3	True	AATAAA	-19	NA	135300856	135269199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_51718_5	chr4	-	1772	10	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	17685	1	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_6	64.4810241011711	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTCATGCGCTTCT	NA	False	NA	-1	True	AATAAA	-21	NA	135283256	135269197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113
Isoform_51719_71	chr4	-	2701	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	-3	True	NA	-2	True	AATAAA	-20	NA	135300856	135269198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_51720_4	chr4	-	2839	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGGTTTTCATGCGCT	NA	False	NA	-4	True	AATAAA	-18	NA	135300996	135269200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_51721_60	chr4	-	2788	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135300943	135269198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
Isoform_51722_160	chr4	-	1895	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	27	-3	27	3	multi-exon	FALSE	canonical	3	336	junction_2	18.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTTTATGTAAGTGA	NA	False	NA	1	True	AATAAA	-30	NA	135601134	135598225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135599766_135600205_135600411_135600984
Isoform_51723_3	chr4	-	2407	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	28	-516	28	516	multi-exon	FALSE	canonical	3	336	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-37	NA	135601133	135597712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135599766_135600205_135600411_135600984
Isoform_51724_5	chr4	-	1578	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	0	341	0	-341	multi-exon	FALSE	canonical	3	336	junction_2	18.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTGTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	135601161	135598569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135599766_135600205_135600411_135600984
Isoform_51726_3	chr4	-	1763	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	-1	157	-1	-157	multi-exon	FALSE	canonical	3	336	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTCAATCTTTATGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	135601162	135598385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135599766_135600205_135600411_135600984
Isoform_51727_3	chr4	-	2056	3	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	-17	-10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	182.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCCCTAGTACATTCTT	NA	False	NA	-12	True	AATAAA	-17	NA	135600898	135598238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_135599766_135600205_135600411_135600574
Isoform_51728_196	chr4	-	1605	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	14	7	-9	-7	multi-exon	FALSE	canonical	3	407	junction_1	24.7476149243608	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCAGGGCTCCCTTATG	NA	False	NA	-18	True	ATTAAA	-13	NA	135699923	135695541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_51729_7	chr4	-	1669	9	FSM	ENSMUSG00000028670.15	ENSMUST00000145350.2	1119	9	-13	-537	2	-3	multi-exon	FALSE	canonical	3	407	junction_1	24.7474746186353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGCTCCCTTATGTGGT	NA	False	NA	-14	True	ATTAAA	-17	NA	135699912	135695537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_51730_13	chr4	-	1684	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-3	2	intron_retention	TRUE	canonical	3	428	junction_2	20.3127884594902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTATGTGGTACAGC	NA	False	NA	-9	True	ATTAAA	-22	NA	135699917	135695532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
Isoform_51731_104	chr4	-	1545	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	12	143	12	-143	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTCTTTTCTTCTGT	2127	False	NA	-2	True	AATAAA	-15	NA	135714563	135702913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
Isoform_51732_204	chr4	-	1503	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	54	143	54	-143	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTCTTTTCTTCTGT	2169	False	NA	-2	True	AATAAA	-15	NA	135714521	135702913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
Isoform_51733_7	chr4	-	1654	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	48	-2	48	2	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTTCAGCCTCTGCAT	2163	False	NA	-1	True	AATAAA	-21	NA	135714527	135702768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
Isoform_51735_41	chr4	-	2746	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	35	1927	35	-1927	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCAGGGTTTTTTGTTT	7739	False	NA	-11	True	AATAAA	-26	NA	135749039	135732605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_51736_14	chr4	-	4602	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	106	0	106	0	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	7810	False	NA	-1	True	AATAAA	-17	NA	135748968	135730678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_51737_50	chr4	-	2675	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	105	1928	105	-1928	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCAGGGTTTTTTGTT	7809	False	NA	-12	True	AATAAA	-25	NA	135748969	135732606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_51738_9	chr4	-	4678	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	30	0	30	0	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	7734	False	NA	-1	True	AATAAA	-17	NA	135749044	135730678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
Isoform_51750_3462	chr4	-	596	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	21	216	21	0	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	3462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780683	135777257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
Isoform_51759_426	chr4	-	3046	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-37	19	-1	-19	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTTATATGAAAAT	NA	False	NA	-28	True	AATAAA	-7	NA	136330035	136277873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
Isoform_51760_70	chr4	-	3080	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-60	8	-24	-8	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATTTATTTTTAAT	NA	False	NA	-17	True	AATAAA	-18	NA	136330058	136277862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
Isoform_51764_378	chr4	-	2990	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-5	23	-5	-19	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTTATATGAAAAT	NA	False	NA	-28	True	AATAAA	-7	NA	136330039	136277873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
Isoform_51765_20	chr4	-	3047	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-62	23	-62	-19	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTTTATATGAAAAT	NA	False	NA	-28	True	AATAAA	-7	NA	136330096	136277873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
Isoform_51778_193	chr4	-	2054	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	49	5	28	-5	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTGAAGGTTATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	137084982	137047011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
Isoform_51779_172	chr4	-	2100	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	3	5	3	-5	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTGAAGGTTATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	137085028	137047011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
Isoform_5179_8	chr11	-	1308	2	ISM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	38	4482	38	-3944	5prime_fragment	FALSE	canonical	3	752	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATAAAAATTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	40646100	40643860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_40644896_40645827
Isoform_51799_60	chr4	-	2468	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	39	15	39	-15	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGAGGCCAGAGC	NA	False	NA	-17	True	AATAAA	-9	NA	137523656	137469058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_51800_64	chr4	-	2441	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	66	15	66	-15	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGAGGCCAGAGC	NA	False	NA	-17	True	AATAAA	-9	NA	137523629	137469058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_51801_30	chr4	-	2281	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	-15	combination_of_known_splicesites	FALSE	canonical	2	49	junction_10	469.73486138459	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGAGGCCAGAGC	NA	False	NA	-17	True	AATAAA	-9	NA	137523630	137469058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137523552
Isoform_51802_7	chr4	-	2930	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	-9	intron_retention	FALSE	canonical	3	1320	junction_10	107.525624852869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523630	137469052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
Isoform_51803_440	chr4	-	2340	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	36	-1	-31	1	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGTACACTGGAGCC	NA	False	NA	-8	True	ATTAAA	-17	NA	138053582	138040721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
Isoform_51808_22	chr4	-	2918	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	11	-3	11	3	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTGAAGGCGTCC	7360	False	NA	NA	False	AATAAA	-16	NA	138452565	138445845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138448690_138452491
Isoform_51809_5	chr4	-	2439	5	FSM	ENSMUSG00000028749.8	ENSMUST00000030526.7	2465	5	28	-2	28	2	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGTCCTTCTTAGGG	NA	False	NA	NA	False	AATAAA	-23	NA	138484909	138477841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138479735_138480573_138480684_138481436_138481582_138484017_138484071_138484671
Isoform_5181_16	chr11	-	774	5	NIC	ENSMUSG00000020415.17	novel	948	5	NA	NA	281	4	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4118.28200679604	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGATTGGTATTTTT	NA	False	NA	-8	True	AATAAA	-38	NA	43316509	43311072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409
Isoform_51811_29	chr4	-	2123	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	9	-1	9	1	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACATGTTTTGGTGTAT	NA	False	NA	-4	True	AATAAA	-25	NA	138590771	138526558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
Isoform_51813_3	chr4	-	2174	7	NNC	ENSMUSG00000041193.16	novel	2131	6	NA	NA	-85	-21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	32.8362942827327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATATGAGACTACCCT	NA	False	NA	-26	True	AATAAA	-3	NA	138590878	138526580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480_138590818_138590851
Isoform_51814_6	chr4	-	1688	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	-23	3	-23	-3	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCTCTGTTTCTCTCTC	NA	False	NA	-3	True	NA	NA	NA	138641279	138622692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
Isoform_51816_3	chr4	-	1811	4	FSM	ENSMUSG00000041120.7	ENSMUST00000042844.7	1793	4	-25	7	-25	-7	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTCCTCGTGGACTGG	NA	False	NA	NA	False	AATAAA	-18	NA	138820329	138809601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138810914_138812551_138812664_138812764_138812960_138820137
Isoform_51818_447	chr4	-	506	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	69	1974	-50	3	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGCAATGCCTTTATT	5248	False	NA	-17	True	AATAAA	-19	NA	138858355	138831098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
Isoform_51821_74	chr4	-	1498	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	37	-3	-6	3	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	0	True	AGTAAA	-18	NA	139037982	139025835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
Isoform_51822_177	chr4	-	1189	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	23	9	-20	1	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTCTTTCTTTTTTTTT	5719	False	NA	-11	True	AATAAA	-35	NA	139079864	139074754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
Isoform_51823_412	chr4	-	976	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	240	5	-25	5	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTTTTTTTTTTTGT	5936	False	NA	-7	True	AATAAA	-39	NA	139079647	139074750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
Isoform_51825_92	chr4	-	1991	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-18	6	-18	-6	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCTGGCCCTATA	NA	False	NA	-5	True	ATTAAA	-22	NA	139974113	139754162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
Isoform_51828_3	chr4	-	4490	28	NIC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	53.9528321154549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCCCTGTGGGGTTTA	NA	False	NA	-7	True	AATAAA	-13	NA	140376055	140241800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_5183_833	chr11	-	695	5	FSM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	281	-28	281	4	multi-exon	FALSE	canonical	3	8449	junction_1	727.283129186976	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGATTGGTATTTTT	NA	False	NA	-8	True	AATAAA	-38	NA	43316509	43311072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409
Isoform_51831_7	chr4	-	4501	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-10	2	-4	-2	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGTGGGGTTTATGG	NA	False	NA	-4	True	AATAAA	-16	NA	140376071	140241797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_51832_19	chr4	-	4365	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	15	2	9	-2	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGTGGGGTTTATGG	NA	False	NA	-4	True	AATAAA	-16	NA	140376052	140241797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_51834_7	chr4	-	4453	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	8680	-1	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_26	42.3527033291848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140367381	140241796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
Isoform_51835_3	chr4	-	3869	16	ISM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	8	51932	2	9009	5prime_fragment	FALSE	canonical	3	130	junction_9	26.8998141257519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140376059	140293727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
Isoform_51836_7	chr4	-	902	4	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11517	1	1917	-1	intron_retention	FALSE	canonical	3	19	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTTACGCCGCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	140458437	140454666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222
Isoform_51843_16	chr4	-	2377	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-60	-1	-60	1	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGTTTACCACGGAGT	NA	False	NA	-10	True	AATAAA	-15	NA	140501607	140473174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_51844_5	chr4	-	2733	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-60	-357	-60	357	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAAAGGGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	140501607	140472818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_51845_3	chr4	-	891	5	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	7317	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	47.4368000607124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTAGTTTACCACGG	NA	False	NA	-13	True	AATAAA	-12	NA	140477919	140473177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477831
Isoform_51846_3	chr4	-	1591	11	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	34	6407	34	14	5prime_fragment	FALSE	canonical	3	81	junction_9	12.9398608956974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAACACAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140501513	140479582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
Isoform_51847_26	chr4	-	3069	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	0	3	0	1	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGGGTGTTGGCCT	NA	False	NA	-3	True	AATAAA	-11	NA	140537959	140512678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
Isoform_51848_24	chr4	-	3091	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	-22	3	-22	1	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGGGTGTTGGCCT	NA	False	NA	-3	True	AATAAA	-11	NA	140537981	140512678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
Isoform_51849_3	chr4	-	3191	16	ISM	ENSMUSG00000040860.17	ENSMUST00000040222.14	6248	35	23394	40	-1092	-40	3prime_fragment	TRUE	canonical	3	61	junction_15	13.4742552876052	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGAGCGTTTGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	140757578	140743990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459
Isoform_5185_14	chr11	-	712	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	5	-21	1	-2	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAACCCCTGATTGGT	NA	False	NA	-14	True	AATAAA	-32	NA	43317039	43311078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
Isoform_51850_5	chr4	-	2955	20	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	0	-11396	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	10.0986820675465	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAAGGCAGCCTTGGA	NA	False	NA	NA	False	NA	NA	NA	140785510	140760244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372
Isoform_51853_8	chr4	-	1991	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	200.893628569947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGATGGATATGTTT	8513	False	NA	-12	True	AATAAA	-20	NA	140805640	140793824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_51854_8	chr4	-	2001	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	22	-5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	200.893628569947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCTCAGATGGATATG	8522	False	NA	-15	True	AATAAA	-17	NA	140805631	140793827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_51856_142	chr4	-	1880	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	26	0	11	0	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8511	False	NA	-10	True	AATAAA	-22	NA	140805642	140793822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_5186_88	chr11	-	713	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	17	11	-7	3	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43317061	43311087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
Isoform_51860_7	chr4	-	4160	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-22	0	intron_retention	TRUE	canonical	3	431	junction_1	26.7810048770061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8526	False	NA	-10	True	AATAAA	-22	NA	140805627	140793822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_51861_4	chr4	-	3654	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	13	0	intron_retention	FALSE	canonical	3	362	junction_2	49.1101369938586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8513	False	NA	-10	True	AATAAA	-22	NA	140805640	140793822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_140794924_140795505_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
Isoform_51862_31	chr4	-	3219	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	-31	14	8	-14	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867069	140840325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
Isoform_51864_81	chr4	-	3168	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	18	14	9	-14	multi-exon	FALSE	canonical	3	50	junction_2	204	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867068	140840325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140843176_140845837_140846090_140867002
Isoform_51869_195	chr4	-	3230	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	14	0	-14	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867077	140840325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
Isoform_51877_174	chr4	-	3173	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	16	14	7	-14	multi-exon	FALSE	canonical	3	212	junction_2	123	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCCTCATTTCTG	NA	False	NA	-14	True	TATAAA	-33	NA	140867070	140840325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_140843176_140845837_140846093_140867002
Isoform_5189_158	chr11	-	1465	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-22	-5	4	5	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTATGTTGTTAATT	NA	False	NA	-5	True	AATAAA	-17	NA	43638831	43620830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
Isoform_51890_16	chr4	-	912	7	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7681	4	-2976	-4	3prime_fragment	FALSE	canonical	3	53	junction_6	23.8146780135464	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4159	False	NA	-8	True	AATAAA	-14	NA	141135644	141131667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
Isoform_51891_6	chr4	-	915	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2956	-4	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	35.5387112878337	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4179	False	NA	-8	True	AATAAA	-14	NA	141135624	141131667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
Isoform_51892_8	chr4	-	653	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	22	230	22	-230	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGCCTCTGTCCTCTTC	NA	False	NA	1	True	ATTAAA	-24	NA	141163394	141160212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141160768_141163296
Isoform_51893_3	chr4	-	683	2	NNC	ENSMUSG00000070637.3	novel	905	2	NA	NA	730	-237	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGTTATGCCTCTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	141162686	141160219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_141160768_141162551
Isoform_51894_3	chr4	-	1416	5	ISM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	66700	967	-256	-393	3prime_fragment	FALSE	canonical	3	63	junction_4	11.6833214455479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATGAA	8795	False	NA	NA	False	NA	NA	NA	141199060	141196167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680
Isoform_5190_10	chr11	-	1963	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-26	-499	0	2	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTGTACAACTTGTG	NA	False	NA	NA	False	NA	NA	NA	43638835	43620336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
Isoform_51925_719	chr4	-	2997	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	39	0	3	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327196	141303372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
Isoform_51929_33	chr4	-	3061	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-24	-1	-24	1	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTTGTCTG	NA	False	NA	-3	True	AATAAA	-15	NA	141327259	141303371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
Isoform_5193_153	chr11	-	2067	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	16	5	16	-3	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGGTTATCTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	44361309	44345402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
Isoform_5195_7	chr11	-	2388	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	8	4057	8	-1246	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	45835754	45823152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_51957_22	chr4	-	1464	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	205	2	-52	2	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345344	141341545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_51958_5	chr4	-	2359	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	172	-860	-85	3	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATTAAAAATAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	141345377	141340683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_51959_13	chr4	-	2548	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	-68	-2	-68	2	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345360	141341545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
Isoform_5196_125	chr11	-	1156	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	14	5283	14	-2472	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTAGTCTCCCACACAG	NA	False	NA	-1	True	AATAAA	-23	NA	45835748	45824378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_51960_12	chr4	-	3177	5	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-52	0	intron_retention	TRUE	non_canonical	0	0	junction_2	45.5686295602578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345344	141341547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_141342018_141342255_141344421_141344446_141344781_141344950_141345024_141345209
Isoform_51961_3	chr4	-	3428	3	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	109	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCGTTGAGGATCACAG	NA	False	NA	-5	True	AATAAA	-15	NA	141345328	141341544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_141344781_141344950_141345024_141345209
Isoform_51962_4	chr4	-	2674	5	FSM	ENSMUSG00000040740.8	ENSMUST00000038661.8	2670	5	-6	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCAATTGCCCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	141351138	141346136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141347906_141348688_141348824_141349514_141349668_141349752_141349819_141350587
Isoform_51964_46	chr4	-	3541	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-4	2	-4	-2	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	NA	False	NA	-8	True	AATAAA	-22	NA	141450734	141410875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_51965_46	chr4	-	3569	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-31	1	-31	-1	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGAATGAGTGA	NA	False	NA	-7	True	AATAAA	-23	NA	141450761	141410874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_51966_6	chr4	-	5658	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-31	-2088	-31	2088	multi-exon	TRUE	canonical	3	149	junction_7	26.8842971285984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	141450761	141408785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_51968_4	chr4	-	5069	5	ISM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	90	15375	90	-15375	5prime_fragment	FALSE	canonical	3	149	junction_2	15.1224171348366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAAAGAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	141450640	141426248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
Isoform_51969_38	chr4	-	3950	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	1815	204	-1815	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTAAAGAAAACACTGC	NA	False	NA	NA	False	NA	NA	NA	141517998	141489314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
Isoform_5197_5	chr11	-	1240	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-72	5285	-72	-2474	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCCTAGTCTCCCACAC	NA	False	NA	-3	True	AATAAA	-21	NA	45835834	45824380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
Isoform_51971_6	chr4	-	660	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-195	3	-195	-3	multi-exon	FALSE	canonical	3	93	junction_1	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTTGAATGAGTCTGT	340	False	NA	-5	True	AATAAA	-15	NA	141546708	141542275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141542367_141545175_141545329_141546292
Isoform_51972_7	chr4	-	538	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-70	0	-70	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	465	False	NA	-2	True	AATAAA	-18	NA	141546583	141542272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141542367_141545175_141545329_141546292
Isoform_51978_399	chr4	-	2202	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-21	200	-21	-200	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTTATGTGTGTGTG	3855	False	NA	-10	True	GATAAA	-5	NA	141602252	141585652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
Isoform_5198_5	chr11	-	2239	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	11	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	12.8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTCCTACAGAATGAGT	6312	False	NA	NA	False	AATAAA	-26	NA	45846310	45837669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
Isoform_51982_23	chr4	-	2398	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-21	4	-21	-4	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTTGCCGAAGGAGC	3855	False	NA	-17	True	NA	NA	NA	141602252	141585456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
Isoform_51984_283	chr4	-	1804	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	0	71	0	multi-exon	FALSE	canonical	3	173	junction_2	4	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9871	False	NA	-6	True	AATAAA	-18	NA	141811544	141758302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_51985_21	chr4	-	2630	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	-826	71	826	multi-exon	FALSE	canonical	3	173	junction_2	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGGAAAAAAAG	9871	False	NA	NA	False	NA	NA	NA	141811544	141757476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_51986_43	chr4	-	1833	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	42	0	42	0	multi-exon	FALSE	canonical	3	173	junction_2	4	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9842	False	NA	-6	True	AATAAA	-18	NA	141811573	141758302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141759406_141764715_141765245_141811372
Isoform_51987_4	chr4	-	2083	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-632	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGACCTCATTCAGTC	9568	False	NA	-7	True	AATAAA	-17	NA	141812247	141758303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_141759406_141764715_141765245_141811795
Isoform_51989_36	chr4	-	1822	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-370	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9830	False	NA	-6	True	AATAAA	-18	NA	141811985	141758302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_141759406_141764715_141765245_141811795
Isoform_5199_67	chr11	-	1220	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	11	1019	0	-1019	multi-exon	FALSE	canonical	3	110	junction_3	12.8	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6312	False	NA	0	True	TATAAA	-19	NA	45846310	45838688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
Isoform_51992_7	chr4	-	4889	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	104.248232011632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966685	141829700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_51993_70	chr4	-	3844	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-9	8	-9	-4	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGGAATTCTATG	NA	False	NA	-11	True	AATAAA	-11	NA	141966721	141866558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_51998_26	chr4	-	3790	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	48	-4	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	56.4110280143223	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGGAATTCTATG	NA	False	NA	-11	True	AATAAA	-11	NA	141966664	141866558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_51999_14	chr4	-	2311	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-40	-7	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	56.4110280143223	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTGTTGCATTTAA	NA	False	NA	-37	True	AAAAAG	-6	NA	141966752	141868125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_52_16	ERCC-00051	+	256	1	FSM	ERCC-00051A	DQ516740	258	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00051_+_0_300
Isoform_520_228	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
Isoform_52001_4	chr4	-	3875	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-45	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.791285894398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGGAATTCTATG	NA	False	NA	-11	True	AATAAA	-11	NA	141966757	141866558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_141869108_141870604_141870656_141874333_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
Isoform_52002_3	chr4	-	1721	2	ISM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-7	69670	-7	-62140	5prime_fragment	FALSE	canonical	3	253	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	141966719	141936220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_141937518_141966295
Isoform_52003_17	chr4	-	1751	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	60	6	-41	-6	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATGAGGCCAACATTT	NA	False	NA	-29	True	AATAAA	-14	NA	143026074	142994006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
Isoform_52005_8	chr4	-	2017	4	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3261	170	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	11.4406682011537	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAACAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	143724200	143717518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_143718582_143719503_143720077_143720652_143720966_143724132
Isoform_52006_3	chr4	-	2612	4	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	4819	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.7843038125248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144130168	144118244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907
Isoform_52007_6	chr4	-	2543	5	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	43.6369969177532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144135005	144118244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907_144130021_144134926
Isoform_52008_115	chr4	-	2430	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	29	1	-18	-1	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144135005	144118244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
Isoform_52010_56	chr4	-	3787	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4466780644462	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGCTTATCTGTTT	7832	False	NA	NA	False	AATAAA	-35	NA	144973440	144940035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_144940551_144940578_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
Isoform_52012_3	chr4	-	3428	13	FSM	ENSMUSG00000028602.13	ENSMUST00000030339.13	3414	13	-13	-1	4	1	multi-exon	FALSE	canonical	2	5	junction_11	3.685557397916	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTTTGGTATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	145041730	144993705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145041591
Isoform_52017_25	chr4	-	2591	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	2	1	2	-1	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGACTTGCTTGTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	147726968	147696394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
Isoform_52019_38	chr4	-	2562	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-3	-1	2	-1	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGACTTGCTTGTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	147726968	147696394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
Isoform_5202_47	chr11	-	3314	24	ISM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	35375	2239	-6250	-23	3prime_fragment	FALSE	canonical	3	87	junction_12	13.4680185487506	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATGAAAAAAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	46167746	46086920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
Isoform_52020_20	chr4	-	2590	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-31	-1	-26	-1	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGACTTGCTTGTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	147726996	147696394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
Isoform_52024_3	chr4	-	846	4	FSM	ENSMUSG00000062518.8	ENSMUST00000117638.2	2885	4	-46	2085	-46	-2085	multi-exon	FALSE	canonical	3	115	junction_2	89.2238134630486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCTTACGAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	147787056	147760043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147760511_147762673_147762801_147766723_147766828_147786908
Isoform_52026_14	chr4	-	619	4	NIC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	-1750	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	106.377733676847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAGAAGAAAAAACACAA	8362	False	NA	NA	False	NA	NA	NA	147860301	147840405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147860154
Isoform_52027_5	chr4	-	666	4	FSM	ENSMUSG00000078495.11	ENSMUST00000122309.2	2405	4	-11	1750	-11	-1750	multi-exon	FALSE	canonical	0	0	junction_3	106.377733676847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAGAAGAAAAAACACAA	8362	False	NA	NA	False	NA	NA	NA	147860301	147840405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147840693_147842158_147842286_147845677_147845783_147860154
Isoform_52028_5	chr4	-	492	3	NIC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	-1750	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAGAAGAAAAAACACAA	8362	False	NA	NA	False	NA	NA	NA	147860301	147840405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147840693_147845677_147845736_147860154
Isoform_52029_3	chr4	-	398	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-52	3892	-52	-131	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATCCTCAGTGGCATG	3889	False	NA	NA	False	NA	NA	NA	147932875	147911334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
Isoform_5203_23	chr11	-	4093	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-34	2239	30	-23	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATGAAAAAAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	46203155	46086920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
Isoform_52030_11	chr4	-	1487	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952935	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52031_9	chr4	-	1860	9	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	28	junction_1	78.0940938867979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52032_4	chr4	-	2151	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_10	97.9021960938569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952955	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525
Isoform_52033_4	chr4	-	1875	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	96.0689856301189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952825
Isoform_52034_192	chr4	-	1603	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	197	13	1	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52035_33	chr4	-	1912	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952959	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52036_6	chr4	-	1845	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-21	0	intron_retention	FALSE	canonical	3	19	junction_4	85.7195236494807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147953001	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52037_23	chr4	-	2010	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	219	junction_7	24.6915667665654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52038_3	chr4	-	2277	7	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	219	junction_6	26.5120517668642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952979	147945248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_147945949_147946702_147946800_147946894_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
Isoform_52041_37	chr4	-	4252	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-11	0	0	0	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989155	147958055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
Isoform_52042_7	chr4	-	4444	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-203	0	-186	0	multi-exon	FALSE	canonical	2	51	junction_4	9.87139526330723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989347	147958055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
Isoform_52043_3	chr4	-	2758	17	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	4918	313	4859	-313	3prime_fragment	FALSE	canonical	3	68	junction_3	13.0144150848204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTGTATGAGAGATGC	NA	False	NA	-9	True	ATTAAA	-10	NA	148016306	147994522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083
Isoform_52045_18	chr4	-	2928	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	2	313	2	-313	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTGTATGAGAGATGC	NA	False	NA	-9	True	ATTAAA	-10	NA	148021222	147994522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
Isoform_52046_18	chr4	-	2894	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	42	307	0	-307	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	-3	True	ATTAAA	-16	NA	148021182	147994516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
Isoform_52047_8	chr4	-	3135	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	7	164	7	-164	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTTCTCCTTCTGTTT	7429	False	NA	NA	False	NA	NA	NA	148123263	148090754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_52049_35	chr4	-	5149	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	32	-1875	-11	0	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7454	False	NA	-1	True	AATAAA	-22	NA	148123238	148088715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_52050_5	chr4	-	5119	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	-28	-1785	-20	-90	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCTATTTTTATTTG	7394	False	NA	-91	True	GATAAA	-20	NA	148123298	148088805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
Isoform_52051_20	chr4	-	3457	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	30	509	30	-509	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTACCCTGAGATTTCTG	NA	False	NA	-11	True	AATAAA	-15	NA	148172458	148162026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_52053_194	chr4	-	1113	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	30	2853	30	603	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	-18	True	NA	NA	NA	148172458	148164370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_52057_14	chr4	-	3609	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	30	357	30	-357	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	148172458	148161874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_52059_224	chr4	-	757	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	31	3208	31	248	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGGTTGGTTTTTTC	NA	False	NA	-2	True	NA	NA	NA	148172457	148164725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_5206_8	chr11	-	3458	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	-26	0	-26	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48708206	48697230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
Isoform_52060_53	chr4	-	810	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-20	3206	-20	250	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTTGGTTTTTTCCC	NA	False	NA	0	True	NA	NA	NA	148172508	148164723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_52061_28	chr4	-	1160	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-17	2853	-17	603	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	-18	True	NA	NA	NA	148172505	148164370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
Isoform_52066_10	chr4	-	1118	5	FSM	ENSMUSG00000055401.15	ENSMUST00000126615.8	794	5	-19	-305	-19	0	multi-exon	FALSE	canonical	3	782	junction_1	8.18535277187245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148234195	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835
Isoform_52069_9	chr4	-	1362	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	-16	0	-4	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236386	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
Isoform_52070_63	chr4	-	1153	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	193	0	-74	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236177	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
Isoform_52073_143	chr4	-	1162	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-20	-331	-20	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236402	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
Isoform_52074_7	chr4	-	1253	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-43	-399	-43	-3	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACACATGTTCATCCTGT	NA	False	NA	51	True	NA	NA	NA	148236425	148230175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
Isoform_52076_69	chr4	-	1104	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	60	-1	60	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236456	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
Isoform_52077_18	chr4	-	1235	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	-71	-1	5	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236587	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
Isoform_52079_236	chr4	-	1166	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	3	71	3	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236589	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
Isoform_5208_21	chr11	-	2504	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-5	-1	-5	1	multi-exon	TRUE	canonical	3	150	junction_7	24.0849049121664	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	49603542	49565538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
Isoform_52080_15	chr4	-	1242	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	3	-5	3	5	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATCCTGTTTGGTTAA	NA	False	NA	59	True	NA	NA	NA	148236589	148230167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
Isoform_52081_36	chr4	-	1081	6	NNC	ENSMUSG00000055401.15	novel	1346	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	294.890895078163	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236586	148230243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236551
Isoform_52082_19	chr4	-	1628	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	203	-2	-3	-1	multi-exon	FALSE	canonical	3	37	junction_4	3.00665927567458	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244337	148237257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
Isoform_52083_4	chr4	-	1532	5	FSM	ENSMUSG00000029001.16	ENSMUST00000105705.9	1034	5	-34	-464	-34	0	multi-exon	FALSE	canonical	2	6	junction_2	15.4979837398289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	148244368	148237259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243281_148244199
Isoform_52085_255	chr4	-	2972	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	20	0	10	0	multi-exon	FALSE	canonical	3	93	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529208	148518951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148521100_148528384
Isoform_52087_15	chr4	-	2588	3	FSM	ENSMUSG00000047719.3	ENSMUST00000156686.2	576	3	-18	-1994	-8	0	multi-exon	FALSE	canonical	2	6	junction_2	43.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529236	148518951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148521100_148528384_148528587_148528998
Isoform_52088_6	chr4	-	1137	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	406.055741624377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGATTCATCACCTG	NA	False	NA	-4	True	AATAAA	-24	NA	148711222	148701174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52089_6	chr4	-	1120	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	407.75718064474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52090_7	chr4	-	1227	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	402.382192164898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711222	148701172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148702163_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52091_63	chr4	-	1209	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	797	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711222	148701172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52092_52	chr4	-	1201	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTCATCACCTGTCA	NA	False	NA	-1	True	AATAAA	-27	NA	148711222	148701171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52093_5	chr4	-	1330	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	409.746860629729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTCATCACCTGTCA	NA	False	NA	-1	True	AATAAA	-27	NA	148711222	148701171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52094_29	chr4	-	2164	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAATGGATTCATCACC	NA	False	NA	-6	True	AATAAA	-22	NA	148711222	148701176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52096_11	chr4	-	1776	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	231	4488	0	-7	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711222	148701326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52097_7	chr4	-	1767	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-7	144	0	-7	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711222	148701326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52098_5	chr4	-	1740	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_1	409.190834316812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711222	148701326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148702200_148703194_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52099_6	chr4	-	1896	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-7	intron_retention	FALSE	canonical	3	28	junction_1	398.788756388921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711222	148701326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_5210_1042	chr11	-	1997	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	36	4	0	-4	multi-exon	TRUE	canonical	0	0	junction_1	263.494104027287	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCTGTGATCCGTAC	NA	False	NA	-18	True	AATAAA	-18	NA	50101618	50090982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
Isoform_52101_150	chr4	-	2735	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	4488	0	-7	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATGTGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	148711222	148701326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52102_6	chr4	-	2878	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	4345	0	-1	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCAAGTCAAATGGATT	NA	False	NA	-13	True	AATAAA	-15	NA	148711222	148701183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52104_5	chr4	-	4167	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	3056	0	28	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCTATATCATG	NA	False	NA	NA	False	NA	NA	NA	148711222	148699894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
Isoform_52108_7	chr4	-	1837	3	ISM	ENSMUSG00000028975.17	ENSMUST00000148203.2	514	4	8	25680	-4	-25680	5prime_fragment	FALSE	canonical	3	405	junction_2	15.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	149184277	149124522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_149126263_149160476_149160525_149184228
Isoform_52109_3	chr4	-	1751	2	ISM	ENSMUSG00000028975.17	ENSMUST00000148203.2	514	4	8	59980	-4	-59980	5prime_fragment	FALSE	canonical	3	405	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAATAATTAAA	NA	False	NA	NA	False	AAGAAA	-28	NA	149184277	149158822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_149160525_149184228
Isoform_52110_4	chr4	-	4029	5	FSM	ENSMUSG00000028971.5_ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	86	-3005	5	-159	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGAGCTTTCTTCTTAT	NA	False	NA	-6	True	AATAAA	-13	NA	149222000	149209649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_52111_18	chr4	-	907	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	52	151	0	-151	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTGCTGTGGCTTC	NA	False	NA	47	True	AATAAA	-18	NA	149222034	149212805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_52113_105	chr4	-	831	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	47	232	-5	110	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222039	149212886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_52114_4	chr4	-	809	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	-13	-107	-5	107	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCAGCTGCTGTGGCT	NA	False	NA	-37	True	AATAAA	-16	NA	149222039	149212889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
Isoform_52115_3	chr4	-	367	4	ISM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	12	1955	12	1202	5prime_fragment	FALSE	canonical	3	344	junction_2	47.1333804808816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGATGAATTTCCTCC	NA	False	NA	NA	False	NA	NA	NA	149222074	149214609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_149214677_149216095_149216130_149216715_149216840_149221932
Isoform_52117_229	chr4	-	2196	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	20	2	20	-2	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251144	149234449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
Isoform_52118_958	chr4	-	2174	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	42	2	-5	-2	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251122	149234449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
Isoform_52123_9	chr4	-	3405	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-150	3736	-80	-3736	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAATAAAGAAGAAAG	7159	False	NA	NA	False	NA	NA	NA	149392230	149321926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
Isoform_52126_70	chr4	-	5488	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	136	2	-13	-2	multi-exon	TRUE	canonical	3	203	junction_22	27.7325828917206	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTGTGAGTCGTCT	NA	False	NA	-4	True	AATAAA	-21	NA	149511070	149412874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
Isoform_52135_9	chr4	-	1041	2	FSM	ENSMUSG00000028960.21	ENSMUST00000173005.2	621	2	-415	-5	0	5	multi-exon	FALSE	canonical	3	264	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTCTGTCTGTTC	NA	False	NA	NA	False	ATTAAA	-35	NA	149511088	149482951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149483243_149510338
Isoform_52136_33	chr4	-	2217	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	9	-988	9	1	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACGACTACCCTCTG	1661	False	NA	-6	True	AATAAA	-18	NA	149569646	149552027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_52138_19	chr4	-	1105	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	-20	153	-16	-113	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAAGGTTCGATTTAA	1632	False	NA	-119	True	NA	NA	NA	149569675	149553168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_52139_4	chr4	-	2649	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	13	-5	9	5	multi-exon	FALSE	canonical	3	41	junction_1	4.98887651569859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGACTACCCTCTGTTGT	1661	False	NA	-2	True	AATAAA	-22	NA	149569646	149552023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
Isoform_52141_5	chr4	-	4932	24	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	2	7	junction_23	5.23547590382274	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTGGCTCAAATA	NA	False	NA	-4	True	AATAAA	-16	NA	149760546	149733628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
Isoform_52143_297	chr4	-	3697	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822501	149799831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_52145_8	chr4	-	4629	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	4	-2	4	2	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822497	149799837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_52148_122	chr4	-	3621	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	0	-1	0	1	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTCTTTTTTTCTTTCA	NA	False	NA	-7	True	AATAAA	-40	NA	149822501	149809319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
Isoform_5215_288	chr11	-	1883	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	790	0	-4	multi-exon	FALSE	canonical	3	390	junction_1	128.516496201532	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCTGTGATCCGTAC	NA	False	NA	-18	True	AATAAA	-18	NA	50101618	50090982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
Isoform_52150_31	chr4	-	1876	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	14	-3	14	3	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTCCTGCATTTATC	NA	False	NA	NA	False	AATAAA	-23	NA	149858720	149828489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_52151_10	chr4	-	1903	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-17	1	-17	-1	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTTTCCTGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	149858751	149828493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_52152_280	chr4	-	1397	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	51	439	51	-439	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTCGTGCTGGGCTGTG	NA	False	NA	-6	True	ATTAAA	-16	NA	149858683	149828931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_52154_77	chr4	-	1467	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-17	437	-17	-437	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGTGCTGGGCTGTGTT	NA	False	NA	-4	True	ATTAAA	-18	NA	149858751	149828929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
Isoform_52158_93	chr4	-	3076	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	6	10	-6	-10	multi-exon	FALSE	canonical	3	59	junction_1	6.5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAAACCATCCGAGT	NA	False	NA	-7	True	AATAAA	-14	NA	150039494	149980749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_149982799_149990872_149991715_150039309
Isoform_52162_67	chr4	-	4756	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-21	10	-21	-10	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTTAACATTGAGTTG	NA	False	NA	-10	True	ATTAAA	-16	NA	150093501	150063941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
Isoform_52163_6	chr4	-	4622	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	150	-27	150	27	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTTTGCCAGCCTCC	NA	False	NA	27	True	GATAAA	-13	NA	150093330	150063904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
Isoform_52167_7	chr4	-	1304	2	ISM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-2	15878	-2	495	5prime_fragment	FALSE	canonical	3	72	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTGTCTTGAGGCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	150093482	150079809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_150080839_150093207
Isoform_52168_3	chr4	-	1529	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-74	5	-74	-5	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTGTGTTACTATT	NA	False	NA	-3	True	AATAAA	-23	NA	150283001	150271476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
Isoform_52169_5	chr4	-	1462	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-6	4	-6	-4	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTGTGTTACTATTC	NA	False	NA	-2	True	AATAAA	-24	NA	150282933	150271475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
Isoform_52174_1650	chr4	-	845	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	63	0	5	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994320	150981589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
Isoform_52184_238	chr4	-	2104	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	12	4	5	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	151142398	151131760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
Isoform_52185_62	chr4	-	2127	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-11	4	-1	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	151142421	151131760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
Isoform_52186_4	chr4	-	2254	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-139	5	-129	-5	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGTCGTGTTTCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	151142549	151131761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
Isoform_52188_3	chr4	-	3390	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	3	-1589	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGCAGAGTAGCATTA	NA	False	NA	NA	False	AATAAA	-28	NA	151193030	151145859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
Isoform_52194_6	chr4	-	2349	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	485.492492217954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCACTAGTGTTGCGTT	NA	False	NA	NA	False	NA	NA	NA	151946203	151864903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_52195_116	chr4	-	601	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-42	1639	0	17	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGTTTAATGAGTA	NA	False	NA	-6	True	AATAAA	-27	NA	151946203	151876669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
Isoform_52197_9	chr4	-	537	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	-7	-24	1	24	multi-exon	FALSE	canonical	3	63	junction_2	493.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAATGAGTACATTTCC	NA	False	NA	1	True	AATAAA	-34	NA	151946202	151876662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_151876960_151914874_151914994_151946081
Isoform_52198_4	chr4	-	737	5	NNC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	-2	17	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	499.788705354573	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGTTTAATGAGTA	NA	False	NA	-6	True	AATAAA	-27	NA	151946197	151876669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_151876960_151914874_151914994_151915132_151915275_151920270_151920341_151946081
Isoform_52199_30	chr4	-	1106	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	17	1	0	-1	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCTGTCACTCGGT	NA	False	NA	-4	True	AATAAA	-15	NA	152073437	152067096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
Isoform_52201_15	chr4	-	1004	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-10	-162	0	-1	multi-exon	FALSE	canonical	3	60	junction_1	59.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCTGTCACTCGGT	NA	False	NA	-4	True	AATAAA	-15	NA	152073437	152067096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152067810_152070125_152070319_152073339
Isoform_52202_18	chr4	-	513	2	FSM	ENSMUSG00000039759.11	ENSMUST00000146471.2	501	2	0	-12	0	12	multi-exon	FALSE	canonical	3	179	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAACCCCAAA	NA	False	NA	NA	False	NA	NA	NA	152073437	152069903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152070319_152073339
Isoform_52204_398	chr4	-	3168	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	39	-2	39	2	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGCCTCCTTAGGTG	NA	False	NA	-3	True	AATAAA	-17	NA	152080676	152074087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
Isoform_52210_68	chr4	-	2216	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-1	3	-1	-1	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8678	False	NA	-4	True	AATAAA	-15	NA	152112119	152104233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_52212_9	chr4	-	2201	11	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	2	-1	intron_retention	FALSE	canonical	2	3	junction_10	15.9715371833772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8671	False	NA	-4	True	AATAAA	-15	NA	152112126	152104233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112021
Isoform_52213_9	chr4	-	2148	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-49	0	intron_retention	FALSE	canonical	2	3	junction_10	15.9715371833772	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8620	False	NA	-1	True	AATAAA	-18	NA	152112177	152104230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112128
Isoform_52214_5	chr4	-	2326	11	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	16	junction_7	13.8506317545446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTGTCTGTTCCTTG	8685	False	NA	-2	True	AATAAA	-17	NA	152112112	152104231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_52215_4	chr4	-	2405	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	16	junction_6	14.204850501775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTCTGTTCCTTGGT	8678	False	NA	0	True	AATAAA	-19	NA	152112119	152104229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152104578_152104646_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_52216_3	chr4	-	2296	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	24	junction_9	11.8049999869275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTGTCTGTTCCTTG	8669	False	NA	-2	True	AATAAA	-17	NA	152112128	152104231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
Isoform_52218_3	chr4	-	2078	4	ISM	ENSMUSG00000028950.4	ENSMUST00000030792.2	2863	6	5990	6	5990	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGTGTGTGGCTTCT	8961	False	NA	-6	True	AATAAA	-8	NA	152117035	152112376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_152113455_152115240_152115362_152115777_152115991_152116369
Isoform_52219_9	chr4	-	3011	15	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.85293935756086	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	152236846	152205337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152205723_152208073_152208086_152208170_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152217380_152217414_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
Isoform_52220_3	chr4	-	2534	10	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	4.36597393430856	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGTTGAGATTCTGCAT	NA	False	NA	-1	True	NA	NA	NA	152236846	152212249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152212790_152212864_152213011_152215225_152215419_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
Isoform_52221_3	chr4	-	1998	4	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	16	-5	intron_retention	FALSE	canonical	3	14	junction_3	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAGTACAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152397789	152391480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152392074_152393294_152393361_152395840_152397034_152397643
Isoform_52222_4	chr4	-	3585	16	FSM	ENSMUSG00000028931.13	ENSMUST00000160884.9	3961	16	376	0	10	0	multi-exon	TRUE	canonical	1	3	junction_13	3.63684845252956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152561991	152475200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152561857
Isoform_52223_3	chr4	-	3589	15	FSM	ENSMUSG00000028931.13	ENSMUST00000159840.8	3574	15	-17	2	-1	0	multi-exon	TRUE	canonical	1	4	junction_13	3.78773530958939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152533314	152475200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152533134
Isoform_52224_6	chr4	-	3538	15	FSM	ENSMUSG00000028931.13	ENSMUST00000030768.10	3597	15	60	-1	-10	0	multi-exon	FALSE	canonical	1	4	junction_13	3.43748840443313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152561986	152475200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152561857
Isoform_52225_40	chr4	-	2011	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	77	5	2	-5	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGACATGTCAAAATTT	NA	False	NA	NA	False	AATAAA	-10	NA	154059506	154048910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
Isoform_52227_3	chr4	-	441	4	FSM	ENSMUSG00000078350.12	ENSMUST00000125533.9	2568	4	273	1854	9	0	multi-exon	FALSE	canonical	3	10	junction_2	12.1928941054479	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGGATTCCCTCCCA	NA	False	NA	-22	True	AATAAA	-17	NA	154110414	154107766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154107911_154108144_154108275_154109960_154110079_154110365
Isoform_52228_11	chr4	-	561	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	171	-25	-13	24	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGCCATTTGTGCAGAC	NA	False	NA	2	True	AATAAA	-41	NA	154110436	154107742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
Isoform_52229_5	chr4	-	3245	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	184	-2722	0	-1	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCTGCGTTCAACCTG	NA	False	NA	NA	False	AATAAA	-13	NA	154110423	154105045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
Isoform_52230_4	chr4	-	4713	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3212	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGACTATTGTAACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	154166567	154140709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
Isoform_52231_8	chr4	-	2685	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3212	231	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGGGTCAGCTTGCT	NA	False	NA	-1	True	GATAAA	-16	NA	154166567	154142737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
Isoform_52232_8	chr4	-	1785	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-24	-7	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245147	154241948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
Isoform_52233_547	chr4	-	1717	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	0	7	0	-7	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245123	154241948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
Isoform_52236_11	chr4	-	1040	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-22	706	-22	-51	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGTTCCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	154245145	154242647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
Isoform_52238_11	chr4	-	1583	3	FSM	ENSMUSG00000029030.15	ENSMUST00000134492.2	915	3	-20	-648	-20	-7	multi-exon	FALSE	canonical	3	8	junction_1	369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGGAGTTGCTCCT	NA	False	NA	-10	True	AGTAAA	-9	NA	154245143	154241948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154243023_154244541_154244719_154244811
Isoform_52240_12	chr4	-	2784	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-23	-48	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTGTTTTACATGT	NA	False	NA	-14	True	CATAAA	-11	NA	154384372	154362990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_52241_8	chr4	-	2915	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	10	-46	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGTTTTACATGTGA	NA	False	NA	-12	True	CATAAA	-13	NA	154384501	154362988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_52243_4	chr4	-	2860	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-32	19	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCATGTTCTGTCCT	NA	False	NA	53	True	AATATA	-23	NA	154384381	154362923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
Isoform_52244_8	chr4	-	2827	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	-16	49	-16	-49	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTTTGTTTTACATG	NA	False	NA	-15	True	CATAAA	-10	NA	154384527	154362991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_52245_8	chr4	-	2907	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	-26	-21	-26	21	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCATGTTCTGTCCTTA	NA	False	NA	55	True	AATATA	-25	NA	154384537	154362921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_52246_9	chr4	-	2626	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	185	49	23	-49	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTTTGTTTTACATG	NA	False	NA	-15	True	CATAAA	-10	NA	154384326	154362991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_52247_9	chr4	-	2704	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	130	26	-32	-26	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCTGTTTCAGTGAAAT	NA	False	NA	8	True	CATAAA	-33	NA	154384381	154362968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
Isoform_52248_3	chr4	-	1633	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5230	3033	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-13	NA	154414079	154404754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
Isoform_52249_16	chr4	-	3730	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-315	-1	-315	1	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTCAAATGCT	NA	False	NA	-21	True	NA	NA	NA	154740090	154730209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154733095_154739245
Isoform_5225_68	chr11	-	3759	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	14	6	14	-6	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACATGTCTGCAGG	8150	False	NA	-60	True	AATAAA	-16	NA	50216486	50185299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
Isoform_52250_5	chr4	-	3815	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-391	-10	-391	10	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAATGCTGAATAGTGA	NA	False	NA	-12	True	ATTAAA	-8	NA	154740166	154730200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154733095_154739245
Isoform_52251_89	chr4	-	810	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	45	28	-27	-28	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTCTCACTGCTTCC	NA	False	NA	-34	True	ATTAAA	-17	NA	154983522	154980883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
Isoform_52256_57	chr4	-	1509	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	33	261	33	-261	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACACTTTCCTTTGA	NA	False	NA	-21	True	TATAAA	-30	NA	155170795	155158827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
Isoform_52258_32	chr4	-	1140	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	1	662	1	-662	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAATTGCATTGATTTC	NA	False	NA	-7	True	AAGAAA	-11	NA	155170827	155159228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
Isoform_52259_8	chr4	-	1771	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	33	-1	33	1	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	-12	True	ATTAAA	-23	NA	155170795	155158565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
Isoform_52260_221	chr4	-	1328	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	3	265	1	-265	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTTGACACTTTCCT	NA	False	NA	-25	True	TATAAA	-26	NA	155170827	155158831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_52263_25	chr4	-	1532	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	65	-1	63	1	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	-12	True	ATTAAA	-23	NA	155170765	155158565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_52264_29	chr4	-	1538	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	3	55	1	-55	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGTGACTTTTAAATC	NA	False	NA	-10	True	GATAAA	-22	NA	155170827	155158621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
Isoform_52265_366	chr4	-	2321	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-29	349	-29	30	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTCTGATGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	155445847	155346526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
Isoform_52267_22	chr4	-	4269	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-32	-1596	-32	4	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCTTCCTGTTATTA	NA	False	NA	-7	True	ATTAAA	-12	NA	155445850	155344581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
Isoform_52269_11	chr4	-	2234	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-34	28	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCCTCTGATGCCTT	NA	False	NA	-8	True	AATAAA	-17	NA	155445852	155346528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
Isoform_52270_23	chr4	-	548	4	ISM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-32	92890	-32	1523	5prime_fragment	FALSE	canonical	3	200	junction_1	19.2584757675391	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTTGCCTGTAT	NA	False	NA	1	True	ATTAAA	-27	NA	155445850	155439067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_155439162_155440883_155440974_155441937_155442060_155445608
Isoform_52271_8	chr4	-	1253	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	180	1	3	1	multi-exon	FALSE	canonical	2	6	junction_5	2.50713268211203	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGTGTTGTTTCCTGG	NA	False	NA	NA	False	GATAAA	-15	NA	155737661	155735112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
Isoform_52273_41	chr4	-	3737	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	0	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7433	False	NA	-5	True	TATAAA	-13	NA	155753642	155739138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52275_3	chr4	-	3944	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	202	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGCTCACGTGGCTTT	7433	False	NA	NA	False	NA	NA	NA	155753642	155738931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52276_4	chr4	-	3657	21	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_20	86.4360312601174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7430	False	NA	-4	True	TATAAA	-14	NA	155753645	155739137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_52278_31	chr4	-	3730	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7428	False	NA	-5	True	TATAAA	-13	NA	155753647	155739138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_5228_93	chr11	-	3719	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	54	6	54	-6	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACATGTCTGCAGG	8190	False	NA	-60	True	AATAAA	-16	NA	50216446	50185299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
Isoform_52282_17	chr4	-	3695	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	-55	2	-55	-1	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7365	False	NA	-7	True	TATAAA	-11	NA	155753710	155739140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52283_54	chr4	-	3628	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	14	0	9	0	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7434	False	NA	-5	True	TATAAA	-13	NA	155753641	155739138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52286_3	chr4	-	3611	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-56	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7364	False	NA	-8	True	TATAAA	-10	NA	155753711	155739141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_52287_12	chr4	-	3544	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7433	False	NA	-6	True	TATAAA	-12	NA	155753642	155739139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_52288_3	chr4	-	3812	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	5	-2	intron_retention	FALSE	canonical	3	72	junction_12	72.017744726946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7430	False	NA	-8	True	TATAAA	-10	NA	155753645	155739141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52289_10	chr4	-	3742	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-25	0	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7395	False	NA	-5	True	TATAAA	-13	NA	155753680	155739138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
Isoform_52290_3	chr4	-	3582	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	43	-2	intron_retention	FALSE	canonical	3	51	junction_18	81.3382663956327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7468	False	NA	-8	True	TATAAA	-10	NA	155753607	155739141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
Isoform_52293_270	chr4	-	2402	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	1	10	1	-10	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845549	155825107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
Isoform_52297_4	chr4	-	2319	4	FSM	ENSMUSG00000042116.4	ENSMUST00000042196.4	3623	4	147	1157	147	-1157	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTCTCCCCAGCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	155859008	155853762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155855123_155855201_155855481_155857165_155857724_155858886
Isoform_52298_122	chr4	-	2117	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	16	529	16	44	multi-exon	FALSE	canonical	3	76	junction_1	2.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGTCAGGTGCCTAA	NA	False	NA	1	True	AATAAA	-42	NA	155953881	155949708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155951343_155951569_155951795_155953623
Isoform_52299_14	chr4	-	2318	2	NIC	ENSMUSG00000029073.10	novel	2662	3	NA	NA	15	17	intron_retention	FALSE	canonical	3	81	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGCATTCTGGGA	NA	False	NA	-26	True	AATAAA	-15	NA	155953882	155949735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155951795_155953623
Isoform_52300_7	chr4	-	1399	7	ISM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	57	2	2	-2	intron_retention	FALSE	canonical	3	268	junction_3	44.2254326026201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9137	False	NA	NA	False	AATAAA	-12	NA	155976181	155973320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814
Isoform_52301_86	chr4	-	1211	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	33	-1	7	1	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9113	False	NA	NA	False	AATAAA	-15	NA	155976205	155973317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_52305_4	chr4	-	2173	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	293	junction_5	33.0357382239296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9138	False	NA	NA	False	AATAAA	-12	NA	155976180	155973320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814
Isoform_52306_3	chr4	-	2024	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	21	junction_6	128.003146662711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9134	False	NA	NA	False	AATAAA	-15	NA	155976184	155973317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
Isoform_52308_19	chr4	-	1986	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	7	1	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9113	False	NA	NA	False	AATAAA	-15	NA	155976205	155973317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_52310_3	chr4	-	2104	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	293	junction_4	37.5126645281297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9143	False	NA	NA	False	AATAAA	-14	NA	155976175	155973318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975697_155975814_155975873_155976087
Isoform_52311_4	chr4	-	1450	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	153.136593688545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9116	False	NA	NA	False	AATAAA	-15	NA	155976202	155973317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
Isoform_52312_3	chr4	-	2276	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	4	1	intron_retention	FALSE	canonical	3	293	junction_4	36.8917334913934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9110	False	NA	NA	False	AATAAA	-15	NA	155976208	155973317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814
Isoform_52313_4	chr4	-	2021	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	14	0	intron_retention	FALSE	canonical	3	293	junction_4	40.5679676592259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9149	False	NA	NA	False	AATAAA	-14	NA	155976169	155973318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
Isoform_52315_4	chr4	-	2886	12	ISM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	14433	11	2262	-7	3prime_fragment	FALSE	canonical	3	284	junction_11	61.9022156107571	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTTAAAATAGGGACTG	NA	False	NA	-32	True	AATAAA	-7	NA	156255925	156249757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858
Isoform_52316_3	chr4	-	3119	13	ISM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	14039	2	1868	-2	3prime_fragment	FALSE	canonical	3	284	junction_11	59.8233510707427	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGGACTGTGTTTGTAC	NA	False	NA	-23	True	AATAAA	-16	NA	156256319	156249748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244
Isoform_52317_27	chr4	-	2709	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	11	3	11	2	multi-exon	TRUE	canonical	3	34	junction_1	16.0850014835956	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTTTGGCCCCCTTTG	8259	False	NA	-3	True	AATAAA	-37	NA	156319303	156313794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_52321_3	chr4	-	2716	12	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	23.0615418119388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCTGAGGCTGAATG	8262	False	NA	-23	True	AATAAA	-17	NA	156319300	156313814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_156314720_156314961_156315144_156315357_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_52323_5	chr4	-	2949	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	15	-1	intron_retention	FALSE	canonical	3	41	junction_7	13.8596536753268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8263	False	NA	-1	True	AATAAA	-39	NA	156319299	156313792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_52324_5	chr4	-	3389	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-2	1	intron_retention	TRUE	canonical	3	45	junction_2	11.6999525165228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCCCCTTTGTACC	8303	False	NA	1	True	AATAAA	-41	NA	156319259	156313790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
Isoform_52327_82	chr4	-	1142	9	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	29	52908	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_5	137.135368796675	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	-10	True	NA	NA	False	ATTAAA	-36	NA	12171842	12100500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_12100591_12153816_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_52329_5	chr4	-	1278	9	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	17	52908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	137.135368796675	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	19	True	NA	NA	False	ATTAAA	-36	NA	12171978	12100500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_12100591_12153816_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
Isoform_52331_31	chr4	-	1838	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127222929	127219028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_127220806_127222868
Isoform_52335_15	chr4	-	2089	7	NNC	ENSMUSG00000008305.19	novel	2067	7	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	98.8714091917151	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	72119126	72075818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
Isoform_52336_40	chr4	-	453	2	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252215	124246965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_124247180_124251976
Isoform_52337_29	chr4	-	1806	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	22	-11	at_least_one_novel_splicesite	FALSE	canonical	3	221	junction_1	470.836925060047	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404668	83380118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
Isoform_52339_4	chr4	-	2218	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	1	3581	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	165.490808675989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTGTGTGGGGTTAC	-4	True	NA	NA	False	NA	NA	NA	34614912	34567214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_52340_9	chr4	-	2232	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-12	3579	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTGTGTGGGGTT	-17	True	NA	NA	False	NA	NA	NA	34614925	34567216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
Isoform_52341_5	chr4	-	877	2	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAGATTGTGGCTTGC	NA	False	NA	NA	False	NA	NA	NA	134163626	134161027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_134161794_134163515
Isoform_52342_5	chr4	-	1177	2	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGACACTCGTTTTG	NA	False	NA	NA	False	AGTAAA	-18	NA	134163632	134160733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_134161794_134163515
Isoform_52343_8	chr4	-	518	2	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTTGTTTTAAAGCT	NA	False	NA	NA	False	AATAAA	-23	NA	152668185	152665274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_152665662_152668054
Isoform_52344_3	chr4	-	591	5	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-5	-62750	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	75.4088854180991	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAAGTGGCTTTCGAA	178	False	19709024	-4	True	NA	NA	NA	19708998	19672422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
Isoform_52345_3	chr4	-	1074	6	NNC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	3	-331	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.47584804016684	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAAGGGTTGAGTCTT	9733	False	NA	NA	False	NA	NA	NA	119272708	119248025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_119248194_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
Isoform_52346_4	chr4	-	2278	3	Antisense	novelGene_ENSMUSG00000070999.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGATATAACCACAGCT	NA	False	NA	NA	False	NA	NA	NA	43993216	43982651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_43984710_43985992_43986071_43993074
Isoform_52347_4	chr4	-	3271	2	NNC	ENSMUSG00000047719.3	novel	2992	2	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCAGTGGCTTTGTTTC	NA	False	NA	-2	True	ATTAAA	-14	NA	148529208	148518953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_148521401_148528384
Isoform_52350_43	chr4	+	1965	8	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	11	20962	11	-2949	5prime_fragment	FALSE	canonical	3	152	junction_6	22.2049819745434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGCATGTGCTTGG	-7	True	NA	NA	False	AAGAAA	-31	NA	3574885	3595657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356
Isoform_52353_7	chr4	+	4319	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	8	0	8	0	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	-10	True	NA	11	True	NA	NA	NA	3574882	3616619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
Isoform_52355_28	chr4	+	2850	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	1	536	1	-536	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTCTTGTGTATC	6	True	NA	19	True	AATACA	-16	NA	3678127	3791076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_52357_56	chr4	+	2913	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	13	537	1	-536	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTCTTGTGTATC	6	True	NA	19	True	AATACA	-16	NA	3678127	3791076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_52358_3	chr4	+	3489	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-26	0	-26	0	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTTGTCTTACTTC	-1	True	NA	NA	False	ACTAAA	-18	NA	3678088	3791613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_52360_3	chr4	+	2897	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	-19	-538	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTTTGTCTTGTGTA	6	True	NA	17	True	AATACA	-14	NA	3678095	3791074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
Isoform_52361_10	chr4	+	525	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	0	-1	0	1	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	NA	False	NA	26	True	ATTAAA	-19	NA	3938887	3943524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_52363_9	chr4	+	501	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	-23	-52	-21	1	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	NA	False	NA	26	True	ATTAAA	-19	NA	3938866	3943524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_52364_39	chr4	+	668	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	4	0	1	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	-5	True	NA	26	True	ATTAAA	-19	NA	3938913	3943524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_52365_8	chr4	+	701	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-35	6	-9	1	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACATGTTTTGGGGTTTT	NA	False	NA	24	True	ATTAAA	-17	NA	3938878	3943522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_52366_8	chr4	+	623	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	0	-3	0	1	multi-exon	FALSE	canonical	3	48	junction_1	167.916645988419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTTTTGGGGTTTTTT	-5	True	NA	26	True	ATTAAA	-19	NA	3938913	3943524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
Isoform_52368_20	chr4	+	2162	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	22	-1566	-9	2	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	5	True	NA	-96	True	NA	NA	NA	5644111	5799948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_52369_25	chr4	+	2095	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	89	-1566	-11	2	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	6	True	NA	-96	True	NA	NA	NA	5644178	5799948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_52370_4	chr4	+	2295	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	-9	-1668	-9	104	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGAGAGCAGAATCTT	NA	False	NA	6	True	ATTAAA	-20	NA	5644080	5800050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_52371_7	chr4	+	2202	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	81	-1665	-19	101	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	-2	True	NA	3	True	ATTAAA	-17	NA	5644170	5800047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
Isoform_52373_67	chr4	+	2073	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-16	1153	15	2	multi-exon	FALSE	canonical	3	35	junction_1	17	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTC	-2	True	NA	-96	True	NA	NA	NA	5644104	5799948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_52374_14	chr4	+	2164	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-8	1054	-8	101	multi-exon	FALSE	canonical	3	35	junction_1	17	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	6	True	NA	3	True	ATTAAA	-17	NA	5644112	5800047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_52375_19	chr4	+	2103	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	58	1049	-11	106	multi-exon	FALSE	canonical	3	35	junction_1	17	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAGAGCAGAATCTTTT	6	True	NA	8	True	ATTAAA	-22	NA	5644178	5800052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_5644411_5729570_5729658_5798268
Isoform_52376_5	chr4	+	4412	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	6	2224	6	-2224	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGCAAAA	-4	True	NA	NA	False	NA	NA	NA	6191103	6219464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
Isoform_52377_14	chr4	+	1509	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	5	5128	5	-5128	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTTTGTCCTTGTG	-5	True	NA	NA	False	TTTAAA	-17	NA	6191102	6216560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
Isoform_52378_104	chr4	+	2051	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	63	631	0	-2	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCGTCTGTCTGTGCC	4	True	NA	11	True	ATTAAA	-16	NA	6365712	6395653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_52379_65	chr4	+	2081	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	33	631	6	-2	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCGTCTGTCTGTGCC	1	True	NA	11	True	ATTAAA	-16	NA	6365682	6395653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_52380_12	chr4	+	2511	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	63	171	0	-171	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGAAATTGTGTTT	4	True	NA	NA	False	NA	NA	NA	6365712	6396113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_52381_7	chr4	+	2567	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	7	171	7	-171	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGAAATTGTGTTT	7856	False	NA	NA	False	NA	NA	NA	6365656	6396113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_52386_37	chr4	+	2085	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	-3	4	-3	-4	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTTCCGTCTGTCTGTG	7873	False	NA	9	True	ATTAAA	-14	NA	6365673	6395651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
Isoform_52394_129	chr4	+	2088	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-28	73	-28	-73	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCCTTCTCATGATG	-45	True	NA	13	True	AATAAA	-13	NA	8535615	8607705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
Isoform_52395_177	chr4	+	1004	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	17	1112	17	-1112	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGATTTTGGAGAT	0	True	NA	19	True	AATAAA	-18	NA	8535660	8606666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
Isoform_524_205	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
Isoform_52400_8	chr4	+	2148	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-88	73	-88	-73	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCCTTCTCATGATG	NA	False	NA	13	True	AATAAA	-13	NA	8535555	8607705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
Isoform_52404_3	chr4	+	2558	3	FSM	ENSMUSG00000041235.13	ENSMUST00000127476.8	2381	3	-15	-162	-15	162	multi-exon	FALSE	canonical	3	49	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCAAGGTAGGCTGTG	28	False	NA	NA	False	AAGAAA	-35	NA	8690454	8785753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_8690776_8751323_8753149_8785341
Isoform_52405_45	chr4	+	2101	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	16	-1	-11	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	-3	True	NA	12	True	AATAAA	-16	NA	10874513	10899422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
Isoform_52406_71	chr4	+	2013	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	104	-1	34	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	29	True	NA	12	True	AATAAA	-16	NA	10874601	10899422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
Isoform_52407_11	chr4	+	5417	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	14	1	11	-1	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGGAGGATTCTTTTA	22	False	NA	15	True	AATAAA	-16	NA	11156454	11174378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
Isoform_52408_7	chr4	+	5399	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	1	4	1	-4	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATGTGGAGGATTCTT	-1	True	NA	12	True	AATAAA	-13	NA	11156431	11174375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
Isoform_52412_13	chr4	+	2615	12	FSM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	57	334	47	-230	multi-exon	FALSE	canonical	3	47	junction_2	64.9822607707368	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAATTAACTAACTG	0	True	NA	-6	True	AATAAA	-4	NA	11191782	11204445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
Isoform_52414_8	chr4	+	5634	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	72	800	-13	-800	multi-exon	TRUE	canonical	3	55	junction_9	10.2468585254619	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTATATATTTTTCC	6	True	NA	14	True	AATAAA	-19	NA	11486029	11549884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
Isoform_52416_3	chr4	+	1958	4	FSM	ENSMUSG00000094595.2_ENSMUSG00000078773.12	ENSMUST00000108306.9	652	4	-19	-1287	8	1287	multi-exon	FALSE	canonical	3	39	junction_3	82.7056359761668	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	-17	True	NA	NA	False	NA	NA	NA	11558929	11580244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633
Isoform_52417_8	chr4	+	2501	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	-17	True	NA	NA	False	AATAAA	-15	NA	11558929	11585750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
Isoform_52418_5	chr4	+	2416	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-12	-1	8	1	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTGAATTTATG	-17	True	NA	NA	False	AATAAA	-10	NA	11558929	11585745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
Isoform_5242_18	chr11	-	2477	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-57	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGCCTCCAGCTTG	748	False	NA	-2	True	AATAAA	-30	NA	50312875	50280114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
Isoform_52420_30	chr4	+	2912	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-42	0	8	0	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-17	True	NA	19	True	AGTAAA	-16	NA	11558929	11615805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
Isoform_52423_6	chr4	+	2711	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_13	71.5348220745028	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-17	True	NA	19	True	AGTAAA	-16	NA	11558929	11615805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
Isoform_52424_4	chr4	+	2804	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	83.7823955011932	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTGTGTGTATCCTT	NA	False	NA	17	True	AGTAAA	-14	NA	11558910	11615803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610441_11612371_11612439_11612617_11612819_11615442
Isoform_52425_3	chr4	+	2448	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	86.901724506607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	-17	True	NA	18	True	AGTAAA	-15	NA	11558929	11615804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
Isoform_52426_4	chr4	+	3432	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	-79	-26	-77	26	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTTGTATTTGTGTA	NA	False	NA	10	True	AATAAA	-18	NA	12089361	12096269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
Isoform_52428_101	chr4	+	2269	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	155	-85	155	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	-37	True	NA	6	True	AATAAA	-13	NA	14864230	14915261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_52429_6	chr4	+	2490	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	-66	-85	-66	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	3	True	NA	6	True	AATAAA	-13	NA	14864009	14915261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_5243_17	chr11	-	2677	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	9	2	9	-2	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGCCTCCAGCTTG	4158	False	NA	-2	True	AATAAA	-30	NA	50321943	50280114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
Isoform_52430_3	chr4	+	2689	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	-18	-332	-18	332	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTCACATTGTATTC	3	True	NA	NA	False	AATAAA	-37	NA	14864057	14915508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_52431_9	chr4	+	2549	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	119	-329	119	329	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGCTCTCACATTGTA	8	True	NA	NA	False	AATAAA	-34	NA	14864194	14915505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_52434_10	chr4	+	2390	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	34	-85	34	85	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACTTTGTTCTATTT	-11	True	NA	6	True	AATAAA	-13	NA	14864109	14915261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
Isoform_52436_5	chr4	+	894	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	-17	-1	-17	1	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTACAGAATTTTTG	-17	True	NA	7	True	TATAAA	-18	NA	14930643	14953031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
Isoform_52437_44	chr4	+	3313	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-55	1412	-55	-1412	multi-exon	FALSE	canonical	3	428	junction_2	4.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGATTGACAATTTCTA	1	True	NA	8	True	AATAAA	-19	NA	15265775	15285341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_15266750_15281006_15281163_15283158
Isoform_52441_10	chr4	+	4725	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-55	0	-55	0	multi-exon	FALSE	canonical	3	428	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTCTTCTCTTTCTTT	1	True	NA	18	True	AATAAA	-19	NA	15265775	15286753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_15266750_15281006_15281163_15283158
Isoform_52444_64	chr4	+	2524	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	9	0	9	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-36	True	NA	9	True	AATAAA	-15	NA	15957933	15992589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
Isoform_52447_6	chr4	+	1141	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-130	723	-85	-723	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTATGGCTTTTTTTC	5	True	NA	12	True	TATAAA	-20	NA	19575076	19606209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
Isoform_52448_13	chr4	+	1064	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-53	723	-8	-723	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTATGGCTTTTTTTC	-24	True	NA	12	True	TATAAA	-20	NA	19575153	19606209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
Isoform_52449_9	chr4	+	2558	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	299	5	-51	-5	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCATGGTGTTTATAT	316	False	NA	16	True	AATAAA	-12	NA	20008305	20030465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
Isoform_52450_8	chr4	+	2794	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-59	318	12	-3	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGTGTTTATATTT	379	False	NA	18	True	AATAAA	-14	NA	20008368	20030467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
Isoform_52451_21	chr4	+	1206	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	113	646	113	-646	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATACTTTGTCTGTGAT	3	True	NA	NA	False	AATACA	-10	NA	20042164	20066104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
Isoform_52452_14	chr4	+	1286	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	33	646	33	-646	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATACTTTGTCTGTGAT	8	True	NA	NA	False	AATACA	-10	NA	20042084	20066104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
Isoform_52453_16	chr4	+	1440	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-49	15	5	-15	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAAAACCAACTTTT	0	True	NA	-3	True	NA	NA	NA	21727705	21747947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_52454_71	chr4	+	1388	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	3	15	0	-15	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAAAACCAACTTTT	-2	True	NA	-3	True	NA	NA	NA	21727757	21747947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_52456_3	chr4	+	1177	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-87	316	-33	-316	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTTTGTTATCATT	NA	False	NA	NA	False	AATAAA	-18	NA	21727667	21747646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
Isoform_52458_4	chr4	+	3385	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-21	1	4	-1	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTTTCTTTTTAATT	-1	True	NA	NA	False	NA	NA	NA	21727704	21750545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
Isoform_52459_13	chr4	+	3333	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	32	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-2	True	NA	NA	False	NA	NA	NA	21727757	21750546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
Isoform_52467_3	chr4	+	3086	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	475	1224	0	-5	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTCTTGCACCTTAAT	-1	True	NA	8	True	AATAAA	-20	NA	21848057	21875251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
Isoform_52468_7	chr4	+	2871	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	453	1221	-12	-2	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTGCACCTTAATTTT	458	False	NA	11	True	AATAAA	-23	NA	21848035	21875254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
Isoform_5247_3	chr11	-	2219	15	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	0	5304	0	-5217	5prime_fragment	FALSE	canonical	3	52	junction_7	8.26968893623217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATGAGTACACTGTAG	4149	False	NA	NA	False	ATTAAA	-14	NA	50321952	50285416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
Isoform_52473_78	chr4	+	2656	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-4	-1	-4	1	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	-14	True	NA	12	True	NA	NA	NA	21879668	21912163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
Isoform_52476_349	chr4	+	1244	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	8	1399	8	-1399	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATTTCTGTGTCACCT	-2	True	NA	17	True	AATAAA	-19	NA	21879680	21910763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
Isoform_52479_4	chr4	+	2639	10	FSM	ENSMUSG00000040410.15	ENSMUST00000184582.2	2570	10	-55	-14	1	1	multi-exon	FALSE	canonical	2	2	junction_8	25.9019995414816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	-21	True	NA	NA	False	AATAAA	-42	NA	22357560	22434089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433145_22433259_22433566
Isoform_5248_5	chr11	-	2335	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-31	3021	3	457	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACCTGTGTGTATGTAT	299	False	NA	NA	False	AATAAA	-27	NA	50718548	50704933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
Isoform_52480_35	chr4	+	2511	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	35	0	7	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-4	True	NA	NA	False	AATAAA	-44	NA	22357577	22434091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
Isoform_52481_26	chr4	+	2533	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	13	0	-4	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-26	True	NA	NA	False	AATAAA	-44	NA	22357555	22434091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
Isoform_52482_79	chr4	+	1351	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-3	2	-3	-2	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTGTCATTCTCGTTG	-8	True	NA	7	True	AATAAA	-16	NA	24496458	24503411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
Isoform_52483_14	chr4	+	4463	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	8	7	-3	-3	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACAGCTCTCTGTGA	-8	True	NA	NA	False	ATTAAA	-16	NA	24496458	24602943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
Isoform_52484_60	chr4	+	2126	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	5	1501	5	-5	multi-exon	FALSE	canonical	3	446	junction_2	23.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	-32	True	NA	9	True	AATAAA	-22	NA	24898087	24903500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24898303_24898572_24898677_24901693
Isoform_52485_115	chr4	+	827	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	20	2785	20	-1269	multi-exon	FALSE	canonical	3	446	junction_2	23.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTTTGTTCTTTGTAG	-17	True	NA	18	True	ATTAAA	-18	NA	24898102	24902216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24898303_24898572_24898677_24901693
Isoform_52488_10	chr4	+	2398	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-45	5	3	-5	multi-exon	FALSE	canonical	3	446	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	-34	True	NA	9	True	AATAAA	-22	NA	24898085	24903500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24898677_24901693
Isoform_52489_27	chr4	+	1095	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-28	1291	20	-1271	multi-exon	FALSE	canonical	3	446	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGGTTTGTTCTTTGT	-17	True	NA	16	True	ATTAAA	-16	NA	24898102	24902214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_24898677_24901693
Isoform_5249_5	chr11	-	2205	6	FSM	ENSMUSG00000048728.16	ENSMUST00000163301.8	2090	6	-119	4	31	-4	multi-exon	FALSE	canonical	3	11	junction_3	3.42928563989645	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACAATTTGTTTCTTT	NA	False	NA	-5	True	ATTAAA	-22	NA	50778447	50763550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50778219
Isoform_52493_3	chr4	+	3958	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	13	-2055	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	1	True	NA	NA	False	NA	NA	NA	28813164	28964760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
Isoform_52494_10	chr4	+	4007	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	0	2739	0	-2055	multi-exon	TRUE	canonical	2	9	junction_4	5.10170008428563	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	0	True	NA	NA	False	NA	NA	NA	28813130	28964760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
Isoform_52499_4	chr4	+	4693	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	14	1066	-9	-1066	multi-exon	TRUE	canonical	3	147	junction_6	19.7680890262564	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTATGTAGGAATGGT	-10	True	NA	10	True	AATAAA	-19	NA	31964110	32022401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
Isoform_5250_6	chr11	-	3082	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	50806988	50789540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
Isoform_5251_3	chr11	-	3093	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	17.9710878913882	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTTGCCTTGGTCATGG	NA	False	NA	-4	True	NA	NA	NA	50806998	50789542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
Isoform_52510_10	chr4	+	3587	8	ISM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-37	8835	-15	4929	5prime_fragment	FALSE	canonical	3	150	junction_1	35.729139768142	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGACAACAAAGAAATACGG	-13	True	NA	NA	False	TATAAA	-38	NA	32615435	32644430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539
Isoform_52514_5	chr4	+	1816	6	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	111538	8	5792	1	3prime_fragment	FALSE	canonical	3	131	junction_1	9.00222194794152	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATCAGGGTTTACT	318	False	NA	12	True	ATTAAA	-15	NA	32768656	32775199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
Isoform_52517_33	chr4	+	1306	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	29	-870	0	694	multi-exon	FALSE	canonical	3	270	junction_2	3	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATCA	14	True	NA	NA	False	NA	NA	NA	32800281	32802253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_32800336_32800609_32800751_32801142
Isoform_52518_9	chr4	+	4742	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	259	7	141	-7	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCTCTTGAAGTGG	0	True	NA	-3	True	AATAAA	-12	NA	32983295	33022173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_52519_11	chr4	+	4646	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	355	7	-62	-7	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCTCTTGAAGTGG	12	True	NA	-3	True	AATAAA	-12	NA	32983391	33022173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
Isoform_52522_3	chr4	+	1231	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	-38	2337	-38	-2337	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGATTGTTTACAAAAAG	-70	True	NA	22	True	ATTAAA	-22	NA	33031377	33050026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
Isoform_52523_19	chr4	+	1874	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19820	0	19820	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGTCATCACTGACT	NA	False	NA	8	True	AATAAA	-15	NA	33152340	33163588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
Isoform_52525_54	chr4	+	2427	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	34	1696	17	4	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTCTGGTTTTGTTTT	-2	True	NA	17	True	ATTAAA	-30	NA	33310344	33500918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
Isoform_52526_11	chr4	+	4128	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	27	2	10	-2	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTTCCTGTCT	-9	True	NA	9	True	AATAAA	-16	NA	33310337	33502612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
Isoform_52529_173	chr4	+	1713	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-316	0	-316	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-4	True	NA	13	True	AATAAA	-14	NA	34550620	34566908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
Isoform_52530_10	chr4	+	2635	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-325	-913	-325	913	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTTAAAAAAAAAAAAAAG	-13	True	NA	NA	False	NA	NA	NA	34550611	34567821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
Isoform_52531_49	chr4	+	1740	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-343	0	-343	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-31	True	NA	13	True	AATAAA	-14	NA	34550593	34566908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
Isoform_52535_3	chr4	+	1213	2	FSM	ENSMUSG00000028292.15	ENSMUST00000149620.2	434	2	20	-799	3	799	multi-exon	FALSE	canonical	3	576	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAGGAAAAAAAAAAA	12	True	NA	NA	False	NA	NA	NA	34614980	34619720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_34615027_34618553
Isoform_52537_8	chr4	+	2305	19	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	-12	4	-12	0	intron_retention	TRUE	canonical	3	576	junction_1	52.339495980628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	-24	True	NA	8	True	AATAGA	-23	NA	34614944	34660163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490
Isoform_52538_216	chr4	+	1848	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	17	3	0	1	multi-exon	FALSE	canonical	3	576	junction_1	51.5992441268264	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	5	True	NA	9	True	AATAGA	-24	NA	34614973	34660164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_52540_28	chr4	+	1950	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	6	True	NA	9	True	AATAGA	-24	NA	34614974	34660164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_52541_3	chr4	+	1807	19	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	160.269410526829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTAGTAGTGTGTTT	-8	True	NA	11	True	AATAGA	-26	NA	34614960	34660166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
Isoform_52542_133	chr4	+	3480	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	349	3	349	-3	multi-exon	FALSE	canonical	3	234	junction_5	35.2306684580353	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTGGCTTTGGAGT	23	True	NA	6	True	ATTAAA	-14	NA	40143429	40198335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
Isoform_52545_10	chr4	+	3824	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	5	3	5	-3	multi-exon	TRUE	canonical	3	234	junction_5	35.2306684580353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTGGCTTTGGAGT	-8	True	NA	6	True	ATTAAA	-14	NA	40143085	40198335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
Isoform_52548_23	chr4	+	318	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	8	718	8	-4	multi-exon	FALSE	canonical	3	97	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCGTGTGGCCTTTTG	7	True	NA	3	True	AGTAAA	-13	NA	40269586	40270222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40269720_40270037
Isoform_52555_41	chr4	+	2305	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	7	1064	7	0	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	0	True	NA	5	True	AATATA	-17	NA	40722486	40733900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_52556_107	chr4	+	2259	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	53	1064	-26	0	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	-4	True	NA	5	True	AATATA	-17	NA	40722532	40733900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_52557_427	chr4	+	1464	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	54	1858	-25	-794	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-3	True	NA	12	True	AATAAA	-18	NA	40722533	40733106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_52563_14	chr4	+	1435	9	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	-1	-796	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	944.437919809979	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTGCCCTGTATGT	-28	True	NA	10	True	AATAAA	-16	NA	40722928	40733104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_40723002_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_52565_18	chr4	+	1573	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	6	4043	-2	-794	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-29	True	NA	12	True	AATAAA	-18	NA	40722927	40733106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
Isoform_52570_55	chr4	+	1421	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	92	6	92	-6	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATGTAATTGTAGTAT	0	True	NA	8	True	AATAAA	-10	NA	40948498	40965297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_52571_216	chr4	+	1367	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	146	6	146	-6	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATGTAATTGTAGTAT	-10	True	NA	8	True	AATAAA	-10	NA	40948552	40965297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_52575_4	chr4	+	1796	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	137	-414	137	414	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTTTCTTGTAAGTC	-19	True	NA	NA	False	AATAAA	-17	NA	40948543	40965717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_52579_5	chr4	+	2198	7	NIC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	92	-6	intron_retention	FALSE	canonical	3	527	junction_5	40.8030499949316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATGTAATTGTAGTAT	0	True	NA	8	True	AATAAA	-10	NA	40948498	40965297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
Isoform_52582_6	chr4	+	1371	3	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	84	27405	84	-26966	5prime_fragment	FALSE	canonical	3	562	junction_1	20.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	40970989	40985203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_40971060_40976352_40977343_40984892
Isoform_52583_6	chr4	+	2224	11	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	65	12750	65	-12311	5prime_fragment	FALSE	canonical	3	463	junction_8	41.1310101991186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAGAAAAAAATTACCC	-21	True	NA	NA	False	NA	NA	NA	40970970	40999858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684
Isoform_52584_7	chr4	+	3547	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	70	0	70	0	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-16	True	NA	16	True	NA	NA	NA	40970975	41012608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
Isoform_52585_171	chr4	+	3014	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	72	1263	72	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-14	True	NA	16	True	NA	NA	NA	40970977	41012608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_52586_27	chr4	+	3069	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	16	1264	16	-1	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	6061	False	NA	15	True	NA	NA	NA	40970921	41012607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_52587_7	chr4	+	3388	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	68	893	68	370	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTAGCCTCCTGTGATA	-18	True	NA	NA	False	NA	NA	NA	40970973	41012978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
Isoform_52588_45	chr4	+	3694	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	83	817	83	-2	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTTTGTGGCACCTA	-3	True	NA	7	True	GATAAA	-18	NA	40970988	41025176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
Isoform_5259_115	chr11	-	2511	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	0	-1074	0	0	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	False	NA	-11	True	AATAAA	-16	NA	51497674	51490926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
Isoform_52590_34	chr4	+	4524	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	68	2	68	-2	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTATTTTGTTTATTG	-18	True	NA	32	True	ATTAAA	-17	NA	40970973	41025991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
Isoform_52592_15	chr4	+	3360	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-14	True	NA	16	True	NA	NA	NA	40970977	41012608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
Isoform_52601_134	chr4	+	2654	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	43	759	-9	0	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	-8	True	NA	5	True	AATAAA	-14	NA	41349038	41389766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
Isoform_52604_5	chr4	+	2343	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	1	-1499	1	1499	multi-exon	FALSE	canonical	3	137	junction_1	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAACAA	5	True	NA	NA	False	NA	NA	NA	41465151	41482425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_41465181_41477513_41477648_41480245
Isoform_52605_116	chr4	+	847	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	137	junction_1	26.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGATGCTTTCTTGGA	1	True	NA	31	True	AATAAA	-27	NA	41465147	41480925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_41465181_41477513_41477648_41480245
Isoform_52607_9	chr4	+	1298	11	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-244	-14	combination_of_known_junctions	FALSE	canonical	2	43	junction_2	83.1877394812481	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTTTCTGACACCAG	-7	True	NA	18	True	AATAAA	-19	NA	41755513	41758681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_52608_3	chr4	+	1434	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	250	-9	intron_retention	FALSE	canonical	2	43	junction_2	87.4838962253364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTGACACCAGAGGAG	10	False	NA	23	True	AATAAA	-24	NA	41755502	41758686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_52609_186	chr4	+	1307	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	274	14	249	-14	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTTTCTGACACCAG	9	False	NA	18	True	AATAAA	-19	NA	41755501	41758681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
Isoform_52611_4	chr4	+	1733	13	FSM	ENSMUSG00000073889.11	ENSMUST00000098132.11	2009	13	273	3	15	-3	multi-exon	FALSE	canonical	1	6	junction_1	3.12138680005467	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTGTCGTCTAATGTT	-7	True	NA	1	True	AATAAA	-17	NA	41760468	41769471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
Isoform_52612_4	chr4	+	2632	5	NIC	ENSMUSG00000036052.15	novel	3302	4	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	12.7549010188241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	1	True	NA	NA	False	AATAAA	-9	NA	42949893	42958724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_42950005_42950475_42950743_42953140_42953386_42956525_42957128_42957317
Isoform_52613_64	chr4	+	2389	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	3	701	3	1	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	-23	True	NA	NA	False	AATAAA	-9	NA	42949869	42958724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
Isoform_52614_4	chr4	+	2611	4	FSM	ENSMUSG00000036052.15	ENSMUST00000084662.12	3302	4	-10	701	-10	1	multi-exon	FALSE	canonical	1	1	junction_1	12.4721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCCTCTGCGCAG	-22	True	NA	NA	False	AATAAA	-9	NA	42950385	42958724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_42950743_42953140_42953386_42956525_42957128_42957317
Isoform_52615_6	chr4	+	5200	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	99	1	8	-1	multi-exon	FALSE	canonical	3	25	junction_11	6.00550711451409	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATTTTCTTTGTGCCCC	18	True	NA	16	True	AATAAA	-18	NA	43382077	43427087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
Isoform_52617_3	chr4	+	874	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-11	2	1	-2	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGTGTTCCTCTGTGC	-10	True	NA	12	True	AGTAAA	-43	NA	43493377	43495919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
Isoform_52618_181	chr4	+	812	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	5	0	5	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-21	True	NA	14	True	AGTAAA	-45	NA	43493366	43495921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
Isoform_52619_3	chr4	+	2317	4	NIC	ENSMUSG00000028461.13	novel	865	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	315	junction_3	11.7284080571728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-16	True	NA	14	True	AGTAAA	-45	NA	43493371	43495921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_43493537_43493607_43495256_43495341_43495433_43495508
Isoform_52620_23	chr4	+	1371	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	318	195	-163	68	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTTTGCTCACGT	8	True	NA	12	True	AATAAA	-14	NA	43562649	43566865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_52621_16	chr4	+	1561	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	324	-1	-157	1	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTACTGGCACAG	14	True	NA	6	True	AATAAA	-15	NA	43562655	43567061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_52623_4	chr4	+	1925	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	-230	189	-230	74	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTCACGTGCTCTG	6178	False	NA	18	True	AATAAA	-20	NA	43562101	43566871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_52625_33	chr4	+	4429	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	3	1	3	-1	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTTGTGTCTTTACTG	-9	True	NA	NA	False	AATGAA	-18	NA	43875532	43944805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
Isoform_52626_144	chr4	+	2020	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	299	1	8	-1	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTCCTCTAATGCGAT	-7	True	NA	35	True	AATAAA	-20	NA	43957699	43979117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_52628_24	chr4	+	2245	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	74	1	74	-1	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTCCTCTAATGCGAT	-4	True	NA	35	True	AATAAA	-20	NA	43957474	43979117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_52630_3	chr4	+	2332	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	-15	3	-15	-3	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTTCCTCTAATGCG	NA	False	NA	33	True	AATAAA	-18	NA	43957385	43979115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_52631_41	chr4	+	2069	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	250	1	-41	-1	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTCCTCTAATGCGAT	136	False	NA	35	True	AATAAA	-20	NA	43957650	43979117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
Isoform_52634_48	chr4	+	1047	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-8	True	NA	21	True	AATAAA	-21	NA	44012669	44032846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_52638_975	chr4	+	1051	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	27	1	-8	-1	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATGAAGCATCTTTAA	-8	True	NA	19	True	AATAAA	-19	NA	44012669	44032844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_52639_152	chr4	+	1081	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	-1	-1	-1	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	8195	False	NA	21	True	AATAAA	-21	NA	44012641	44032846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_52643_185	chr4	+	2535	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	40	380	40	-380	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTATTTGGAGTG	-4	True	NA	25	True	AATAAA	-26	NA	44300915	44364295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_52645_10	chr4	+	2913	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	41	1	41	-1	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATAGCACTGTTTC	-3	True	NA	NA	False	ATTAAA	-10	NA	44300916	44364674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_52647_4	chr4	+	2495	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	17	443	17	-443	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTTGTATCT	NA	False	NA	-38	True	AATATA	-1	NA	44300892	44364232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_52649_16	chr4	+	2394	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	20	-373	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGGAGTGTGTTTTA	NA	False	NA	32	True	AATAAA	-33	NA	44300895	44364302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
Isoform_52652_5	chr4	+	2465	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	21	17	1	-17	multi-exon	FALSE	canonical	3	29	junction_2	42.9270820694815	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGCCTGAAACCATGT	11	True	NA	NA	False	AAGAAA	-3	NA	44756588	44932186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
Isoform_52653_6	chr4	+	1068	8	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	0	1538	0	186	5prime_fragment	FALSE	canonical	3	277	junction_3	35.5045268743498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGAAGTGGATGCGT	-31	True	NA	NA	False	AATAGA	-37	NA	44981394	44989196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919
Isoform_52654_272	chr4	+	1243	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2	35	2	-35	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGCCTATGACTTGG	-29	True	NA	13	True	ATTAAA	-16	NA	44981396	44990699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
Isoform_52655_221	chr4	+	1585	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	69	1332	-10	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATCTCCCTCCTTTCAT	4	True	NA	14	True	ATTAAA	-19	NA	45018651	45032360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_52656_23	chr4	+	2938	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	50	-2	-29	2	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTGACGACAATATTT	-15	True	NA	35	True	ATTAAA	-17	NA	45018632	45033694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_52658_8	chr4	+	3512	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	63	-589	-16	589	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTGTAAGTACTTGC	-2	True	NA	NA	False	AATATA	-21	NA	45018645	45034281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_52660_3	chr4	+	2084	11	FSM	ENSMUSG00000028318.15	ENSMUST00000054723.9	1235	11	-602	-247	-29	-1	multi-exon	FALSE	canonical	3	141	junction_3	16.4754362612952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATCTCCCTCCTTTCA	-15	True	NA	13	True	ATTAAA	-18	NA	45018632	45032359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
Isoform_52661_30	chr4	+	1386	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	32	646	4	343	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCCGATTTCCACC	-4	True	NA	8	True	CATAAA	-17	NA	45297158	45315485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
Isoform_52663_8	chr4	+	2223	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-19	5046	-19	-243	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGATTGAAAAAGTTCA	-17	True	NA	12	True	AATAAA	-25	NA	45342081	45374713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
Isoform_52664_68	chr4	+	2201	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	95	2	-4	-2	multi-exon	FALSE	canonical	3	42	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTATCACTGTTTTCC	12	True	NA	10	True	ATTAAA	-24	NA	45799116	45804602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_45799170_45802454
Isoform_52666_3	chr4	+	3592	15	ISM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	68	8031	68	-8031	5prime_fragment	FALSE	canonical	0	0	junction_9	2.71052370871575	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTGTGCTAAAAAT	-6	True	NA	NA	False	TATAAA	-25	NA	45972300	46026730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656
Isoform_52669_28	chr4	+	3066	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-58	2	-58	-2	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGGAGTCATGGTTT	11	True	NA	19	True	AATAAA	-19	NA	46138554	46172401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_52670_206	chr4	+	2871	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	137	2	137	-2	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGGAGTCATGGTTT	-4	True	NA	19	True	AATAAA	-19	NA	46138749	46172401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_52672_4	chr4	+	2768	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-97	339	-97	85	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTTTGCTTTCTTGTA	13	True	NA	NA	False	NA	NA	NA	46138515	46172064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
Isoform_52693_286	chr4	+	1657	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	57	2	57	-2	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTAGTTGTACTCTCAC	5	True	NA	6	True	AATAAA	-18	NA	46450958	46472655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_52694_738	chr4	+	1524	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	57	135	57	-135	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTTTTCTCATGCTT	5	True	NA	18	True	AATAAA	-14	NA	46450958	46472522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_52695_32	chr4	+	1739	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-25	2	-25	-2	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTAGTTGTACTCTCAC	-3	True	NA	6	True	AATAAA	-18	NA	46450876	46472655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_527_412	SIRV7	-	2463	5	FSM	SIRV7A	SIRV701	2462	5	0	-1	0	1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGTGTTAATATGAATCA	NA	False	NA	NA	False	TATAAA	-20	NA	147923	1002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
Isoform_52701_103	chr4	+	1607	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-25	134	-25	-134	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-3	True	NA	19	True	AATAAA	-15	NA	46450876	46472523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
Isoform_52712_6	chr4	+	2738	2	FSM	ENSMUSG00000028334.11_ENSMUSG00000064410.2	ENSMUST00000132345.2	2603	2	13	-148	13	-1	multi-exon	FALSE	canonical	3	1023	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATAAAATACAGTTTT	16	True	NA	NA	False	AATAGA	-37	NA	46489331	46495284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46489491_46492705
Isoform_52713_84	chr4	+	2096	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	73	10	2	-10	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCTGTACTTACTTTG	5	True	NA	4	True	NA	NA	NA	46489320	46503622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_52714_36	chr4	+	2138	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	37	4	-34	-4	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACTTACTTTGATGTGT	-31	True	NA	10	True	NA	NA	NA	46489284	46503628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_52715_83	chr4	+	1178	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	43	958	-28	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	-25	True	NA	12	True	AATAAA	-25	NA	46489290	46502674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_52719_312	chr4	+	1148	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	73	958	2	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	5	True	NA	12	True	AATAAA	-25	NA	46489320	46502674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
Isoform_52720_11	chr4	+	2291	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	-11	8	-11	-8	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTATCATAATGTTCA	NA	False	NA	25	True	AATAAA	-35	NA	47091897	47123062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
Isoform_52722_929	chr4	+	557	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	3	4	3	-4	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGGTTGCCTGTGCTT	-19	True	NA	NA	False	AATAAA	-21	NA	47474660	47483238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
Isoform_52727_27	chr4	+	2381	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-5	3394	-2	882	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTGAGTATTTATTTC	0	True	NA	12	True	ATTAAA	-9	NA	48124920	48183113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
Isoform_52729_6	chr4	+	2487	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	-2	880	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTGAGTATTTATT	0	True	NA	10	True	ATTAAA	-7	NA	48124920	48183111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
Isoform_52730_3	chr4	+	1536	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	44	9	44	-9	multi-exon	FALSE	canonical	3	23	junction_1	140.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTTTATAGTTACAC	62	False	NA	5	True	NA	NA	NA	48539978	48561909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48539998_48552379_48552831_48560843
Isoform_52731_3	chr4	+	1937	4	NIC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	136.514549489138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTGTGTATGTTTTTA	25	False	NA	19	True	NA	NA	NA	48539941	48561923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_48540272_48549921_48549998_48552379_48552831_48560843
Isoform_52734_44	chr4	+	1719	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	0	-341	0	0	multi-exon	FALSE	canonical	3	126	junction_1	89	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	2	True	NA	14	True	NA	NA	NA	48540078	48561918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48540272_48552379_48552831_48560843
Isoform_52735_5	chr4	+	1879	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	-160	-341	-16	0	multi-exon	FALSE	canonical	3	126	junction_1	89	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	2	True	NA	14	True	NA	NA	NA	48539918	48561918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48540272_48552379_48552831_48560843
Isoform_52740_3	chr4	+	1747	4	NNC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	134.650164005346	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	-5	True	NA	14	True	NA	NA	NA	48540123	48561918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_48540272_48549924_48549998_48552379_48552831_48560843
Isoform_52742_34	chr4	+	1644	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-48	1	-48	0	multi-exon	FALSE	canonical	3	153	junction_1	75.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	-10	True	NA	14	True	NA	NA	NA	48540450	48561918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48540569_48552379_48552831_48560843
Isoform_52746_235	chr4	+	2498	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-408	-664	-31	3	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGTGTGCTCATTT	-19	True	NA	NA	False	AATATA	-18	NA	48585142	48663134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_52750_38	chr4	+	2452	10	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	136.341075574784	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	16	True	NA	NA	False	AATATA	-13	NA	48585177	48663129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
Isoform_52753_73	chr4	+	2459	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	2	0	2	0	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	14	True	NA	NA	False	AATATA	-15	NA	48585175	48663131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_52756_13	chr4	+	2549	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	-88	0	-88	0	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	-22	True	NA	NA	False	AATATA	-15	NA	48585085	48663131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
Isoform_52760_14	chr4	+	2477	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	160.121096149442	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	-12	True	NA	NA	False	AATATA	-13	NA	48585149	48663129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
Isoform_52762_7	chr4	+	2967	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	26	-28	26	28	multi-exon	FALSE	canonical	3	41	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAAAGCTGAGATGTT	-13	True	NA	NA	False	AATAAA	-20	NA	49521242	49531545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_49521596_49522397_49522483_49529016
Isoform_52764_3	chr4	+	2361	16	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	9	4331	9	6	5prime_fragment	FALSE	canonical	3	46	junction_1	14.0412091913608	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAGGAGAAGAAAGAGA	-4	True	NA	NA	False	NA	NA	NA	49632074	49652556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521
Isoform_52777_4	chr4	+	2659	18	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	-5	18315	-5	11371	5prime_fragment	FALSE	canonical	3	347	junction_1	37.9264449284862	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAAGAAAAACAACAG	-24	True	NA	NA	False	AAAACA	-23	NA	52439237	52469945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771
Isoform_52779_9	chr4	+	2178	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	50	-676	-20	676	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTTGGTTATTTGA	-18	True	NA	NA	False	ATTAAA	-40	NA	53011929	53022736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
Isoform_5278_103	chr11	-	2370	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	0	0	0	0	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	False	NA	-11	True	AATAAA	-16	NA	51497674	51490926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
Isoform_52780_144	chr4	+	1500	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	52	0	-18	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	-16	True	NA	10	True	AATAAA	-21	NA	53011931	53022060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
Isoform_52783_4	chr4	+	2054	7	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	267.705061588308	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCAAGTGAGTCTTC	2	True	NA	11	True	AATAAA	-22	NA	53011949	53022061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114_53018686_53020181_53020332_53021110_53021198_53021283
Isoform_52784_39	chr4	+	4624	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-261	19	-3	-19	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTGTTTAGAAATTAT	-36	True	NA	14	True	AATAAA	-14	NA	53440409	53567799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
Isoform_52788_7	chr4	+	3397	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	170	2513	5	1	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	-3	True	NA	NA	False	NA	NA	NA	53714167	53763272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
Isoform_52792_14	chr4	+	2864	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	2	-4	2	4	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTATTCTTCTTCTTTT	-14	True	NA	NA	False	ATTAAA	-35	NA	53826046	53862023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_52793_10	chr4	+	2907	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-45	0	-45	0	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	NA	False	NA	NA	False	ATTAAA	-31	NA	53825999	53862019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_52794_18	chr4	+	1452	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-17	1427	-17	-1427	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTATACAGTTATTT	-33	True	NA	5	True	AATAAA	-14	NA	53826027	53860592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_52795_26	chr4	+	1422	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	13	1427	1	-1427	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTATACAGTTATTT	-3	True	NA	5	True	AATAAA	-14	NA	53826057	53860592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_52797_3	chr4	+	2699	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	42.4345083628879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGGTATTCTTCT	-12	True	NA	NA	False	ATTAAA	-29	NA	53826048	53862017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_53826221_53848865_53849051_53850473_53850562_53854311_53854430_53859881
Isoform_52804_267	chr4	+	2317	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	12	1481	3	-1481	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCATTGCATGTTTG	-6	True	NA	16	True	AGTAAA	-8	NA	55350054	55390756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_52806_55	chr4	+	3095	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	7	708	0	-708	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCATGTTTAACTTTCA	-11	True	NA	17	True	AATAAA	-25	NA	55350049	55391529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_52807_266	chr4	+	2777	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	7	1026	0	-1026	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGCTTTTATTTGGA	-11	True	NA	36	True	ATTAAA	-18	NA	55350049	55391211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_52811_10	chr4	+	2435	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	-106	1481	-106	-1481	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCATTGCATGTTTG	NA	False	NA	16	True	AGTAAA	-8	NA	55349936	55390756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
Isoform_52821_4	chr4	+	4272	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	0	3	0	-3	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGCTTTCTGTGTAC	0	True	NA	10	True	AATAAA	-19	NA	56802348	56809598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_52822_4	chr4	+	2311	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-27	1991	-23	1663	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCACGTCCACGGCAGC	0	True	NA	NA	False	NA	NA	NA	56802321	56807610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_52824_16	chr4	+	1164	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-27	3138	-23	516	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGTTTCTCATTGGCT	0	True	NA	2	True	AAAACA	-20	NA	56802321	56806463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
Isoform_52828_23	chr4	+	3073	4	ISM	ENSMUSG00000038729.25	ENSMUST00000107600.8	7231	5	15424	3861	15424	-3861	3prime_fragment	FALSE	canonical	2	4	junction_1	6.48074069840786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	NA	False	NA	NA	False	AATACA	-9	NA	57757518	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_57757684_57854561_57857038_57883023_57883203_57892868
Isoform_52829_26	chr4	+	2871	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15447	-3861	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	NA	False	NA	NA	False	AATACA	-9	NA	57757541	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_57757684_57854561_57857038_57892868
Isoform_52832_58	chr4	+	3034	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	17	-3861	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.29983164553722	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	0	True	NA	NA	False	AATACA	-9	NA	57782196	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_57782323_57854561_57857038_57883023_57883203_57892868
Isoform_52834_55	chr4	+	3074	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	-23	-3861	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.29983164553722	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	-13	True	NA	NA	False	AATACA	-9	NA	57782156	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_57782323_57854561_57857038_57883023_57883203_57892868
Isoform_52835_70	chr4	+	2872	3	NIC	ENSMUSG00000038729.25	novel	784	2	NA	NA	0	-3861	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	10	True	NA	NA	False	AATACA	-9	NA	57782179	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_57782323_57854561_57857038_57892868
Isoform_52838_99	chr4	+	2961	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	3	3866	3	-3864	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAACAAAAAACAAA	-2	True	NA	NA	False	AATACA	-6	NA	57845250	57893118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
Isoform_52839_16	chr4	+	3045	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	-78	3863	-77	-3861	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	NA	False	NA	NA	False	AATACA	-9	NA	57845169	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
Isoform_52841_183	chr4	+	2785	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	4	3861	3	-3861	multi-exon	FALSE	canonical	3	18	junction_2	1	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	-2	True	NA	NA	False	AATACA	-9	NA	57845250	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_57845307_57854561_57857038_57892868
Isoform_52842_20	chr4	+	2866	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-77	3861	-77	-3861	multi-exon	FALSE	canonical	3	18	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAATA	NA	False	NA	NA	False	AATACA	-9	NA	57845169	57893121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_57845307_57854561_57857038_57892868
Isoform_52850_6	chr4	+	1485	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	-45	2583	-45	307	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGAAGTGTTTCTTC	-42	True	NA	11	True	TTTAAA	-4	NA	59003126	59022990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
Isoform_52851_193	chr4	+	1056	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	133	3	133	-3	multi-exon	FALSE	canonical	3	257	junction_2	16.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTAGTTTGTGTTTGGTG	9	True	NA	32	True	AATAAA	-32	NA	59035220	59041900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59035319_59039226_59039359_59041074
Isoform_52854_5	chr4	+	1183	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	0	9	0	-9	multi-exon	FALSE	canonical	3	257	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGCAGTAGTTTGTGT	1876	False	NA	26	True	AATAAA	-26	NA	59035087	59041894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59035319_59039226_59039359_59041074
Isoform_52855_24	chr4	+	3724	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	283	5	-18	-5	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACGAGAGTAATGGACT	42	True	NA	NA	False	AATAAA	-14	NA	59189539	59222828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
Isoform_52857_16	chr4	+	3771	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	240	1	-61	-1	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGAGTAATGGACTGGCT	-1	True	NA	NA	False	AATAAA	-18	NA	59189496	59222832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
Isoform_52858_13	chr4	+	2515	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	96	0	14	0	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGCCTTTTATTTC	35	False	NA	20	True	NA	NA	NA	59581658	59618689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
Isoform_52861_11	chr4	+	2583	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	29	-1	29	1	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGCCTTTTATTTCT	-3	True	NA	21	True	NA	NA	NA	59581591	59618690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
Isoform_52864_13	chr4	+	2805	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-33	433	-1	-433	multi-exon	FALSE	canonical	2	5	junction_2	48.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAACAAATC	-12	True	NA	NA	False	NA	NA	NA	59626209	59720968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59626492_59690143_59691339_59719640
Isoform_52865_92	chr4	+	2714	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	5	8137	5	263	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAGAA	-6	True	NA	NA	False	AAGAAA	-42	NA	59626215	59753302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
Isoform_52867_3	chr4	+	2559	3	NIC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-17	259	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	48.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAAAAAGAAAAGAAAA	-28	True	NA	NA	False	AAGAAA	-38	NA	59626193	59753298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_59626492_59690143_59691339_59752232
Isoform_52868_3	chr4	+	1023	3	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	13	36042	13	-25859	5prime_fragment	FALSE	canonical	3	98	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAATACAAA	-19	True	NA	NA	False	NA	NA	NA	59805852	59868695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_59806226_59857444_59857637_59868237
Isoform_52870_3	chr4	+	3531	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	0	8013	0	2170	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGCTGGCAGTATGAG	-32	True	NA	NA	False	NA	NA	NA	59805839	59896724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
Isoform_52872_7	chr4	+	2735	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	9	4570	9	-366	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGATCTCTCTTCCATA	-23	True	NA	NA	False	CATAAA	-12	NA	59805848	59900167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
Isoform_52873_3	chr4	+	7034	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	4	276	4	-276	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGAGATTATAAAAAGGAA	-28	True	NA	NA	False	AAAAAG	-29	NA	59805843	59904461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
Isoform_52875_59	chr4	+	1770	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	50	0	50	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204735	62216648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
Isoform_52876_135	chr4	+	3742	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-26	2	-26	-2	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCTGTCTACACA	NA	False	NA	21	True	AATAAA	-21	NA	62278937	62310004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
Isoform_52883_32	chr4	+	2831	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	12	2380	12	1279	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTATTTTCTATTTCA	NA	False	NA	17	True	AGTAAA	-24	NA	62327045	62342847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
Isoform_52887_71	chr4	+	2156	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	9	2	9	-2	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCTTTGCTGGTAAC	9565	False	NA	26	True	AATAAA	-37	NA	62398298	62415533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
Isoform_52888_4	chr4	+	1745	7	FSM	ENSMUSG00000028392.16	ENSMUST00000030088.12	1757	7	9	3	9	-3	multi-exon	FALSE	canonical	3	6	junction_6	6.83130051063973	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGTCTTTGCTGGTAA	9565	False	NA	25	True	AATAAA	-36	NA	62398298	62415532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234_62414809_62415218
Isoform_52889_4	chr4	+	1822	10	ISM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-92	31290	-92	-382	intron_retention	FALSE	canonical	3	65	junction_5	11.4352714046832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62501745	62544386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333
Isoform_52890_5	chr4	+	2450	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-91	-287	-91	287	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACACTGCAAGGGTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	62501746	62575963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_52891_4	chr4	+	2506	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-144	-290	-144	290	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGCAAGGGTCTGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	62501693	62575966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_52892_4	chr4	+	4370	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-92	-2206	-92	-195	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGTTCTGGGATCCCATT	NA	False	NA	NA	False	AATACA	-22	NA	62501745	62577882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
Isoform_52893_27	chr4	+	4306	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	-1	combination_of_known_junctions	FALSE	canonical	2	39	junction_18	14.1957973061405	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTGTGTATTCCTGG	NA	False	NA	0	True	AATAAA	-20	NA	62501745	62621254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_52894_4	chr4	+	4358	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-145	-2	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTGTATTCCTG	NA	False	NA	-1	True	AATAAA	-19	NA	62501692	62621253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_52895_3	chr4	+	1907	18	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	14350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.5594757112746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62501745	62592427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62592347
Isoform_52896_3	chr4	+	622	5	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-140	-16507	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	32.2286751201473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTCTGGCCTCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	62501697	62525646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482
Isoform_52897_5	chr4	+	2634	7	NIC	ENSMUSG00000059810.19	novel	496	2	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9071680247511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTGTATTCCTG	NA	False	NA	-1	True	AATAAA	-19	NA	62581873	62621253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_62582030_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
Isoform_52898_1180	chr4	+	1007	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	79	49	79	-49	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	1180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTGGCTCCTTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	63463087	63468938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_63463237_63466821_63466923_63468181
Isoform_52904_4	chr4	+	3781	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTAGTAAGGGACCA	NA	False	NA	14	True	AATAAA	-14	NA	63477027	63504590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_52906_20	chr4	+	2251	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-26	1540	-26	-1536	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATATGTATTCATTC	NA	False	NA	NA	False	NA	NA	NA	63476991	63503054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_52907_30	chr4	+	3762	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	2	1	2	-1	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTAAGGGACCATGT	NA	False	NA	17	True	AATAAA	-17	NA	63477019	63504593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_52910_13	chr4	+	3151	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-23	637	-23	-633	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGCTCGTGGAGGCGT	NA	False	NA	11	True	AATAAA	-22	NA	63476994	63503957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
Isoform_52911_114	chr4	+	3173	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	21	0	21	0	multi-exon	FALSE	canonical	3	75	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523243	65534475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_65523307_65531365
Isoform_52912_53	chr4	+	3170	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	21	0	21	0	multi-exon	FALSE	canonical	3	41	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523243	65534475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_65523307_65531368
Isoform_52914_8	chr4	+	4296	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-99	-1	-99	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170073	74324098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_52916_22	chr4	+	4237	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-40	-1	-40	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170132	74324098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
Isoform_52918_7	chr4	+	1711	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	33	1322	33	-1322	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGGTTTGTGGTGTTG	NA	False	NA	22	True	AATAAA	-24	NA	80828915	80872543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_80829883_80871799
Isoform_52919_31	chr4	+	927	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	13	2	0	-2	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTCTAGTCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	83335980	83360321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
Isoform_52920_10	chr4	+	2089	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	10	-694	3	1	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGTTTAAAAGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	83335970	83372271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
Isoform_52921_64	chr4	+	1378	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	20	7	0	-7	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAACTTCTGATTCTTT	NA	False	NA	11	True	TATAAA	-11	NA	83335980	83371570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
Isoform_52922_5	chr4	+	2054	2	ISM	ENSMUSG00000028488.16	ENSMUST00000107184.8	671	5	-109	28710	-15	-28710	5prime_fragment	FALSE	canonical	3	264	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAGTGTCTCTAAACC	NA	False	NA	NA	False	CATAAA	-9	NA	85123662	85267218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_85123859_85265360
Isoform_52923_44	chr4	+	2834	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-14	2	-14	-2	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGGCTTCTGCTTCTT	NA	False	NA	26	True	AATAAA	-16	NA	85123663	85307615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
Isoform_52927_6	chr4	+	3115	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-295	2	20	-2	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGGCTTCTGCTTCTT	NA	False	NA	26	True	AATAAA	-16	NA	85123382	85307615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
Isoform_52928_3	chr4	+	3488	11	ISM	ENSMUSG00000038024.18	ENSMUST00000142837.3	5870	31	51593	-1543	48005	-5	3prime_fragment	FALSE	canonical	3	53	junction_8	6.70522184569608	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGGTGTCTGTTGA	NA	False	NA	NA	False	AATAAA	-11	NA	86744084	86768835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
Isoform_52929_4	chr4	+	4150	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11631	-4	11613	4	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATTTCTTTCTTTA	7697	False	NA	30	True	AATAAA	-21	NA	86804263	86839116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
Isoform_52931_122	chr4	+	664	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	77	2202	77	129	multi-exon	FALSE	canonical	3	467	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4197	False	NA	22	True	NA	NA	NA	86849004	86850857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_86849080_86850268
Isoform_52933_3	chr4	+	724	4	ISM	ENSMUSG00000038368.17	ENSMUST00000161058.8	1430	9	-28	53646	-12	7586	5prime_fragment	FALSE	canonical	3	135	junction_1	10.2306728354819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88012853	88047635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134
Isoform_52935_13	chr4	+	5809	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-14	-4	-13	-1	multi-exon	TRUE	canonical	0	0	junction_35	26.0666035463672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTTTTATTTTTAAG	NA	False	NA	14	True	AGTAAA	-23	NA	88012852	88329247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
Isoform_52936_104	chr4	+	2547	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	260	-10	260	10	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTTGAGCGTTTGTGT	5308	False	NA	NA	False	NA	NA	NA	89055618	89099328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
Isoform_5294_231	chr11	-	1931	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	16	-1	16	-1	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGATTGCATGGTCTTG	NA	False	NA	-8	True	AATATA	-20	NA	51526707	51514498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_52941_17	chr4	+	748	8	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	16	28862	16	-28862	5prime_fragment	FALSE	canonical	3	184	junction_4	8.69200899724358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTACATATGCATAAATG	NA	False	NA	NA	False	NA	NA	NA	94502743	94524073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010
Isoform_52942_15	chr4	+	1136	12	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	16	3708	16	-3708	5prime_fragment	FALSE	canonical	3	154	junction_8	18.8942249255478	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACCTTTGAACCGGGAC	NA	False	NA	NA	False	NA	NA	NA	94502743	94549227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184
Isoform_52945_9	chr4	+	2104	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	38	-3	38	3	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTTTTCCTGTGTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	94502765	94581469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
Isoform_52946_8	chr4	+	1868	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	16	7	3	-2	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAACTGGAGTCACTTA	NA	False	NA	3	True	AATAAA	-16	NA	95445759	95815169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
Isoform_52947_10	chr4	+	979	9	ISM	ENSMUSG00000028572.14	ENSMUST00000125627.8	2336	16	-75	14159	48	1783	5prime_fragment	FALSE	canonical	3	114	junction_6	15.2515368078105	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAACTATAGGTAGT	4762	False	NA	NA	False	AAGAAA	-36	NA	95855524	95889558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406
Isoform_52948_3	chr4	+	2138	15	FSM	ENSMUSG00000061859.18	ENSMUST00000107030.9	2104	15	-37	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_14	5.57554792768187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	98284091	98342941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98342596
Isoform_52949_10	chr4	+	3305	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	64	221971	0	-1	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTCTTTTAAATTCCC	NA	False	NA	NA	False	AATAAA	-19	NA	98284091	98385869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
Isoform_52953_3	chr4	+	2706	3	FSM	ENSMUSG00000087166.10	ENSMUST00000152889.9	705	3	60	-2061	1	2061	multi-exon	FALSE	canonical	3	192	junction_2	120.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAGAGAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	98615030	98623942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98615078_98615631_98615708_98621359
Isoform_52954_13	chr4	+	3129	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	15	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	188.179933839929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTCCCTGCTTATTT	NA	False	NA	40	True	NA	NA	NA	98614999	98626725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98625038_98625061
Isoform_52956_17	chr4	+	3091	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	188.179933839929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615029	98626717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98625038_98625061
Isoform_5296_11	chr11	-	2036	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	-86	-4	-86	2	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGCATGGTCTTGTGT	NA	False	NA	-5	True	AATATA	-23	NA	51526809	51514495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_52966_31	chr4	+	3071	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615029	98626717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98625038_98625061
Isoform_52967_13	chr4	+	3109	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	15	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTCCCTGCTTATTT	NA	False	NA	40	True	NA	NA	NA	98614999	98626725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98625038_98625061
Isoform_52977_36	chr4	+	3482	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	38	7	38	-7	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGTGTGATTTTTT	NA	False	NA	11	True	AATAAA	-17	NA	98812153	98823773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52978_5	chr4	+	3669	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-144	2	-75	-2	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-22	NA	98811971	98823778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52979_3	chr4	+	3733	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-208	2	-139	-2	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-22	NA	98811907	98823778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52983_14	chr4	+	3462	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	113	2	-41	-2	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-22	NA	98812159	98823778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52984_4	chr4	+	3585	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-10	2	-10	-2	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-22	NA	98812036	98823778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52985_3	chr4	+	3707	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-137	7	-137	-7	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAATGTGTGATTTTTT	NA	False	NA	11	True	AATAAA	-17	NA	98811909	98823773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52989_21	chr4	+	3238	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-40	-5	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTGATTTTTTTT	NA	False	NA	13	True	AATAAA	-19	NA	98812160	98823775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_5299_6	chr11	-	2030	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	16	2	intron_retention	FALSE	canonical	3	245	junction_3	13.7380630002923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGCATGGTCTTGTGT	NA	False	NA	-5	True	AATATA	-23	NA	51526707	51514495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
Isoform_52990_4	chr4	+	3491	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-139	-5	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTGATTTTTTTT	NA	False	NA	13	True	AATAAA	-19	NA	98811907	98823775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52991_15	chr4	+	3396	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-43	-4	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGATTTTTTTTT	NA	False	NA	14	True	AATAAA	-20	NA	98812003	98823776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
Isoform_52995_5	chr4	+	1984	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-3	-1627	-3	1627	multi-exon	FALSE	canonical	3	84	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGTTGCGAATGGAT	NA	False	NA	1	True	AATAAA	-12	NA	99457733	99462875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_99457876_99461033
Isoform_52996_12	chr4	+	1086	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-20	-712	-20	712	multi-exon	TRUE	canonical	3	84	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATAGCTGGTCTCTTC	NA	False	NA	2	True	AATAAA	-23	NA	99457716	99461960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_99457876_99461033
Isoform_52998_14	chr4	+	3073	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	2	4	2	-4	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603903	99651693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_52999_3	chr4	+	2842	13	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-16	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	56.4121736270934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603884	99651694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_53_5	ERCC-00053	+	1005	1	FSM	ERCC-00053A	DQ516785	1007	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	1006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00053_+_0_1000
Isoform_53000_6	chr4	+	2599	10	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-35	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	60.5042596194579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603865	99651694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
Isoform_53002_240	chr4	+	2315	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	51	5	51	-5	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTGCCTGTTGTCGCTTT	NA	False	NA	11	True	ATTAAA	-14	NA	99786661	99844486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
Isoform_53007_3	chr4	+	5755	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	7	3	7	-3	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGAGGGGCTGCTGGTATC	NA	False	NA	15	True	AATAAA	-17	NA	100633878	100861738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
Isoform_53008_13	chr4	+	4047	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	-3	1	-3	-1	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTAGTATGTTTATTG	NA	False	NA	7	True	ATTAAA	-17	NA	100926176	101009566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
Isoform_53009_11	chr4	+	4179	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	12	-5	0	5	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATTTCATAAATGCA	NA	False	NA	24	True	AATAAA	-22	NA	101276485	101324197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_53011_4	chr4	+	4351	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	0	9	0	-9	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCTTAATATGTGATGGA	NA	False	NA	10	True	AATAAA	-8	NA	101276485	101324183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_53012_201	chr4	+	4086	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	415	1	1	-1	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGATGGAATTTCATA	NA	False	NA	18	True	AATAAA	-16	NA	101276930	101324191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_53017_4	chr4	+	601	2	NNC	ENSMUSG00000028527.19	novel	462	3	NA	NA	1	-38028	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGTTTCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	101276930	101279750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_101277163_101279381
Isoform_53018_4	chr4	+	4210	4	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	27482	4	-422	-4	3prime_fragment	FALSE	canonical	3	206	junction_1	41.3037528561268	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATGTGATGGAATTTC	NA	False	NA	15	True	AATAAA	-13	NA	101303997	101324188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_101304477_101317696_101317870_101320145_101320265_101320749
Isoform_53019_7	chr4	+	5055	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	67	5	67	-4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353911	101499991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_53020_3	chr4	+	5065	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-8	-4	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	23.5903830583462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTTAGAAATATAC	NA	False	NA	2	True	ATTAAA	-10	NA	101353836	101499991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
Isoform_53021_3	chr4	+	604	2	ISM	ENSMUSG00000035212.15	ENSMUST00000106927.2	1754	4	-20	6415	-20	-6415	5prime_fragment	FALSE	canonical	3	622	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGGAAAAAAAAAAGATAC	8270	False	NA	NA	False	NA	NA	NA	101504969	101510146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_101505023_101509595
Isoform_53022_199	chr4	+	1866	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	31	1	31	-1	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTTGCATTTCATAA	8246	False	NA	7	True	AATAAA	-19	NA	101504945	101516560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
Isoform_53023_7	chr4	+	1922	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	-25	1	-25	-1	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTTGCATTTCATAA	8190	False	NA	7	True	AATAAA	-19	NA	101504889	101516560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
Isoform_53027_3	chr4	+	2003	5	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.316915940478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTTGCATTTCATAA	8217	False	NA	7	True	AATAAA	-19	NA	101504916	101516560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_101505023_101507060_101507169_101509595_101509672_101513305_101513493_101515034
Isoform_53032_5	chr4	+	4646	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	102	4	-2	-1	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGTGTGGTGTCT	445	False	NA	11	True	ATTAAA	-12	NA	102976584	103022945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
Isoform_53034_62	chr4	+	1875	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	34	6	34	-6	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTCCTTGCCTTAGT	76	False	NA	10	True	AATAAA	-22	NA	103171042	103223634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_53037_15	chr4	+	1746	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	35	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	32.5739347406756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCCTTGCCTTAGTT	77	False	NA	11	True	AATAAA	-23	NA	103171043	103223635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
Isoform_53038_7	chr4	+	1973	10	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.2935381197454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTCCTTGCCTTAGT	73	False	NA	10	True	AATAAA	-22	NA	103171039	103223634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_53040_8	chr4	+	1165	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	-33	64464	-33	-2	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGACTGTTGTAACT	NA	False	NA	6	True	AATAAA	-13	NA	104224753	104537577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
Isoform_53041_11	chr4	+	1085	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTTGTAACTTTC	NA	False	NA	9	True	AATAAA	-16	NA	104224754	104537580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
Isoform_53043_46	chr4	+	3132	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	20	7	20	-7	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGGCACTGGTGCCT	NA	False	NA	6	True	AATAAA	-16	NA	105014563	105089954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_53045_76	chr4	+	3064	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	90	5	90	-5	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGCACTGGTGCCTGA	NA	False	NA	8	True	AATAAA	-18	NA	105014633	105089956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_53048_6	chr4	+	3309	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-151	1	-151	-1	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACTGGTGCCTGAGCTG	NA	False	NA	12	True	AATAAA	-22	NA	105014392	105089960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_53050_45	chr4	+	3224	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-70	5	-70	-5	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGCACTGGTGCCTGA	NA	False	NA	8	True	AATAAA	-18	NA	105014473	105089956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
Isoform_53066_5	chr4	+	1479	10	FSM	ENSMUSG00000028514.16	ENSMUST00000106798.7	3179	10	-6	1706	1	-1706	multi-exon	FALSE	canonical	3	72	junction_3	119.167586114039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGCACCTGAGTCACAT	NA	False	NA	NA	False	AATGAA	-17	NA	106173410	106216374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212
Isoform_53067_3	chr4	+	2094	16	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-30	78612	-9	1827	5prime_fragment	FALSE	canonical	3	60	junction_13	95.1698831914102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAGAAAGATGGAT	NA	False	NA	NA	False	NA	NA	NA	106173400	106219907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884
Isoform_53068_582	chr4	+	3984	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	44	0	44	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418278	106446310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
Isoform_53069_54	chr4	+	4033	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418229	106446310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
Isoform_53074_4	chr4	+	3055	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	-3	-6	-3	4	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	9	True	AATAAA	-24	NA	106508291	106512483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106508329_106509465
Isoform_53075_90	chr4	+	2186	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	4	1	4	1	multi-exon	FALSE	canonical	3	40	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508306	106512478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106508329_106510314
Isoform_53076_62	chr4	+	2203	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	41	-1742	4	1	multi-exon	FALSE	canonical	3	39	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTGTGTGTGTGTGT	NA	False	NA	4	True	AATAAA	-19	NA	106508306	106512478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106508346_106510314
Isoform_53077_8	chr4	+	1920	8	FSM	ENSMUSG00000034871.3	ENSMUST00000047620.3	1923	8	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_2	2.64189171555813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACTGTGTAAGACCTGGG	2116	False	NA	4	True	NA	NA	NA	106591088	106605489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735
Isoform_53078_7	chr4	+	2418	9	NNC	ENSMUSG00000034871.3	novel	1923	8	NA	NA	3	5094	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	2.82566363886433	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGGCGGCAGAGCTTGG	2116	False	NA	NA	False	NA	NA	NA	106591088	106610583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735_106605463_106610058
Isoform_53079_11	chr4	+	2292	5	FSM	ENSMUSG00000061887.15	ENSMUST00000132506.8	1128	5	-417	-747	-26	747	multi-exon	FALSE	canonical	3	191	junction_1	7.51664818918645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	106768640	106868478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875
Isoform_53080_16	chr4	+	2171	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	25	999	-16	3	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTGGTTTATTTCAAAA	NA	False	NA	15	True	AATAAA	-15	NA	106768691	106905892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_53082_51	chr4	+	2080	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-29	1144	-29	7	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	106768637	106905747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_53083_15	chr4	+	2221	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-25	999	-25	3	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTGGTTTATTTCAAAA	NA	False	NA	15	True	AATAAA	-15	NA	106768641	106905892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_53086_3	chr4	+	2443	17	NIC	ENSMUSG00000061887.15	novel	3195	18	NA	NA	-16	1	intron_retention	FALSE	canonical	3	121	junction_12	39.2825800291936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	106768691	106905696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_53088_6	chr4	+	2144	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-92	-128	-29	3	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTGGTTTATTTCAAAA	NA	False	NA	15	True	AATAAA	-15	NA	106768637	106905892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
Isoform_53092_642	chr4	+	1457	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	317	1	-10	1	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGAGTGTTGGGCTTTC	NA	False	NA	14	True	ATTAAA	-26	NA	107035912	107058192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
Isoform_53097_30	chr4	+	1781	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	-8	2	-8	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	NA	False	NA	13	True	ATTAAA	-25	NA	107035587	107058191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
Isoform_5310_610	chr11	-	2369	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-28	26	-28	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541697	51533915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_53103_53	chr4	+	611	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	-9	5	-4	1	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCCATTTTTTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	107111090	107137130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
Isoform_53104_41	chr4	+	647	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	-31	-8	-4	-2	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCATTTTTTTTATAT	NA	False	NA	6	True	ATTAAA	-17	NA	107111090	107137133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
Isoform_53105_54	chr4	+	1307	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	15	-1	-6	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171574	107217020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
Isoform_53106_161	chr4	+	2317	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	263	2004	-5	9	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGTCTATGGCAGCCGAA	NA	False	NA	20	True	AATAAA	-21	NA	107225243	107271539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_53107_139	chr4	+	4319	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	263	2	-5	-2	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGAATCTCTGTGTGT	NA	False	NA	20	True	AATAAA	-31	NA	107225243	107273541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_53109_11	chr4	+	2596	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	-19	2007	-19	6	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCGTCTATGGCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	107224961	107271536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_53110_8	chr4	+	2674	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	227	1683	-41	330	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTCTCGATTTACAG	NA	False	NA	NA	False	ATTAAA	-17	NA	107225207	107271860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
Isoform_53113_505	chr4	+	654	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	9	29	9	8	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTTTTTGTTATT	NA	False	NA	21	True	AATAAA	-23	NA	107736960	107744592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
Isoform_53116_7	chr4	+	2607	7	FSM	ENSMUSG00000028608.16	ENSMUST00000120473.8	835	7	0	-1772	0	0	multi-exon	FALSE	canonical	3	475	junction_1	106.405931330082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747065	107754315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
Isoform_53117_108	chr4	+	680	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	51	2266	1	0	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747060	107754315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_53118_39	chr4	+	1356	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	51	1590	1	-8	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATACTTGTGTGT	NA	False	NA	15	True	NA	NA	NA	107747060	107754991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_53119_3	chr4	+	762	8	NIC	ENSMUSG00000028608.16	novel	1551	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747095	107754315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_53120_3	chr4	+	1533	7	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	20	junction_6	269.974535836253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATACTTGTGTGT	NA	False	NA	15	True	NA	NA	NA	107747314	107754991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107753858
Isoform_53123_7	chr4	+	884	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	-17	684	13	0	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747078	107754315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_53125_3	chr4	+	1553	7	NIC	ENSMUSG00000028608.16	novel	1551	7	NA	NA	13	-10	intron_retention	FALSE	canonical	3	63	junction_2	243.112742478784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATGTATACTTGTGT	NA	False	NA	13	True	NA	NA	NA	107747078	107754989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_107747400_107748661_107748719_107749156_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
Isoform_53127_607	chr4	+	1263	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	39	5	10	-3	multi-exon	FALSE	canonical	3	713	junction_3	43.9463758530471	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022672	108036500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_53128_11	chr4	+	1511	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	-209	5	-209	-3	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022424	108036500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_53129_41	chr4	+	1541	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	10	-232	10	-3	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022672	108036500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
Isoform_5313_280	chr11	-	2552	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-198	13	-198	-13	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGTGTTTGAAAATGG	NA	False	NA	-13	True	AATATA	-19	NA	51541867	51533902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_53135_220	chr4	+	885	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	30	2799	-8	62	multi-exon	FALSE	canonical	3	432	junction_2	33.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTATGGGGGTGTGTCTT	NA	False	NA	51	True	AGTAAA	-34	NA	108185366	108195942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_53136_20	chr4	+	923	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	-10	2801	-10	60	multi-exon	FALSE	canonical	3	432	junction_2	33.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTATGGGGGTGTGTC	NA	False	NA	49	True	AGTAAA	-32	NA	108185326	108195940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_53137_9	chr4	+	2852	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	30	832	-8	-832	multi-exon	FALSE	canonical	3	432	junction_2	33.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAGAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	108185366	108197909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108185488_108189407_108189549_108195319
Isoform_53141_114	chr4	+	3004	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	7	3	7	-3	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGGTATGGTTTGG	5279	False	NA	18	True	NA	NA	NA	108436657	108472027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_53150_6	chr4	+	2755	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	-5	-159	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAAATAGTTCTGGGA	5247	False	NA	-1	True	NA	NA	NA	108436625	108471871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_53152_7	chr4	+	2885	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGGTATGGTTTGG	5273	False	NA	18	True	NA	NA	NA	108436651	108472027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
Isoform_53156_5	chr4	+	3370	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	23	-90	23	90	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGCCCTGCTCTCTGT	3556	False	NA	103	True	NA	NA	NA	108477159	108491410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
Isoform_53159_263	chr4	+	1290	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	60	9	26	-9	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTATGGTGGCCTTT	NA	False	NA	19	True	ATTAAA	-13	NA	108691857	108719315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
Isoform_5316_106	chr11	-	2617	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-276	26	-276	-26	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541945	51533915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
Isoform_53160_11	chr4	+	1366	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	-16	9	-16	-9	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTATGGTGGCCTTT	NA	False	NA	19	True	ATTAAA	-13	NA	108691781	108719315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
Isoform_53162_20	chr4	+	1139	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	47	2141	47	-2	multi-exon	FALSE	canonical	3	36	junction_4	5.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACAACCTGCTTGTTTC	NA	False	NA	2	True	ATTAAA	-13	NA	108736306	108798380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
Isoform_53165_3	chr4	+	1024	2	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-108	47131	7	-18688	5prime_fragment	FALSE	canonical	3	601	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTAAAGAAAACAAAAAGA	9947	False	NA	NA	False	TATAAA	-17	NA	108857858	108871227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_108858362_108870706
Isoform_53166_11	chr4	+	3867	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-95	12	20	-12	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACGTGTATTTAAAG	9960	False	NA	27	True	AATAAA	-19	NA	108857871	108918346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_53168_19	chr4	+	3997	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	15	299	15	3	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATCTGCCGTGGCT	9955	False	NA	23	True	AGTAAA	-25	NA	108857866	108918675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_53169_151	chr4	+	3697	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-12	626	-12	-10	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACGTGTATTTAAAGAC	9928	False	NA	29	True	AATAAA	-21	NA	108857839	108918348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
Isoform_53174_4	chr4	+	5216	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-32	6	-32	-6	multi-exon	TRUE	canonical	3	117	junction_16	21.9326225188771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACTTTGTTATCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	109137432	109245008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_53175_9	chr4	+	3031	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	36	2123	1	7	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGTTCTGGTGTGCAT	NA	False	NA	4	True	ATTAAA	-14	NA	109137500	109242891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
Isoform_53176_3	chr4	+	2035	18	FSM	ENSMUSG00000028555.16	ENSMUST00000064129.14	2356	18	59	262	17	101	multi-exon	TRUE	canonical	1	2	junction_14	2.90923835738311	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGTGTTTAAAAAACCAA	NA	False	NA	NA	False	AATACA	-15	NA	109264342	109301680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
Isoform_53180_1410	chr4	+	2461	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	98	1909	98	-1909	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533882	109819248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_53181_826	chr4	+	2531	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	28	1909	28	-1909	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533812	109819248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_53184_193	chr4	+	2555	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	-3	1916	-3	-1916	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCCCATCCATGAGTA	NA	False	NA	21	True	AATAAA	-13	NA	109533781	109819241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
Isoform_53191_5	chr4	+	1520	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	-71	-1	11	1	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGGCCTTTGCATTTT	NA	False	NA	2	True	AATAAA	-14	NA	111272213	111317118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
Isoform_53192_9	chr4	+	1465	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	-11	372	-11	-1	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGCATTTTTTTTG	NA	False	NA	7	True	AATAAA	-19	NA	111272191	111317123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
Isoform_53193_7	chr4	+	2448	13	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	31.6318887973654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACCTCTGGTATTT	NA	False	NA	12	True	AATAAA	-27	NA	111577206	111686331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625896_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_53195_15	chr4	+	2356	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-167	50	0	0	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACCTCTGGTATTT	NA	False	NA	12	True	AATAAA	-27	NA	111577234	111686331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
Isoform_53196_48	chr4	+	2405	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	53	8	-1	0	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACCTCTGGTATTT	NA	False	NA	12	True	AATAAA	-27	NA	111577233	111686331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_53199_5	chr4	+	2240	11	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.5550277738606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	15	True	AATAAA	-30	NA	111577214	111686334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_111577455_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
Isoform_53201_3	chr4	+	5122	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	-28	191	-28	-191	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGGTGTGTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	114857327	114900202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
Isoform_53202_4	chr4	+	5263	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	23	-1	0	1	multi-exon	FALSE	canonical	3	47	junction_15	11.7923107892389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGACTTCTCTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	114857378	114900394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
Isoform_53203_7	chr4	+	2247	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-43	12398	-7	-12398	5prime_fragment	FALSE	canonical	3	178	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	115594933	115598731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_115596038_115597588
Isoform_53207_4	chr4	+	5707	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	-26	-2889	-26	-3	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTGACTAGAAT	NA	False	NA	26	True	AATAAA	-15	NA	115594914	115634521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
Isoform_53210_47	chr4	+	1918	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	17	395	17	48	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTAGATTTGCATG	NA	False	NA	0	True	AATAAA	-16	NA	115642027	115669116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_53211_177	chr4	+	1743	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	22	395	22	48	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTAGATTTGCATG	NA	False	NA	0	True	AATAAA	-16	NA	115642202	115669116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_53213_5	chr4	+	1851	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	39	270	39	173	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCATAGTGGAAACT	NA	False	NA	NA	False	AATAAA	-25	NA	115642219	115669241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
Isoform_53216_15	chr4	+	2893	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-20	11	-20	-11	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCAACCACTGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	115685268	115693371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
Isoform_53220_15	chr4	+	2550	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	-2	4	-2	-4	multi-exon	FALSE	canonical	3	11	junction_1	55.5404857930697	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTGGCAGCCTTGG	NA	False	NA	6	True	AATAAA	-12	NA	115696427	115736443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_53221_3	chr4	+	1388	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	-3	-8	-1	8	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCGTGTCTTATTCTA	NA	False	NA	NA	False	TTTAAA	-20	NA	115696416	115731075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
Isoform_53222_5	chr4	+	3844	12	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	23	1	0	-1	intron_retention	FALSE	canonical	3	99	junction_1	25.6792034067123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115696417	115736446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
Isoform_53223_100	chr4	+	2506	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	35	2	0	-2	multi-exon	FALSE	canonical	3	99	junction_1	27.9607860325055	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696429	115736445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_53224_5	chr4	+	2468	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	50.580432632484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696427	115736449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115735146
Isoform_53225_3	chr4	+	2377	13	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	47.2622705995197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTGGCAGCCTTGG	NA	False	NA	6	True	AATAAA	-12	NA	115696417	115736443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_53233_451	chr4	+	2983	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	82	0	82	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932547	115954240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
Isoform_53237_396	chr4	+	2723	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	-4	0	-4	0	multi-exon	FALSE	canonical	3	321	junction_9	36.7984644262092	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007710	116017041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_53240_6	chr4	+	2669	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-17	-2	intron_retention	TRUE	canonical	2	3	junction_17	95.0191559634161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007697	116017039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_53243_6	chr4	+	2712	22	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-2	0	intron_retention	TRUE	canonical	2	5	junction_1	91.9681498648807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007712	116017041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116007815_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
Isoform_53245_8	chr4	+	4628	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	77	-2587	74	2579	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTGGAAATGTCAG	NA	False	NA	22	True	ATTAAA	-14	NA	116364822	116398019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
Isoform_53246_29	chr4	+	2059	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	64	-5	61	-3	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCAACAGTACAAATGGT	NA	False	NA	NA	False	AATAAA	-24	NA	116364809	116395437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
Isoform_53247_11	chr4	+	2321	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	65	-268	62	260	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTGTTTGCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	116364810	116395700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
Isoform_53249_7	chr4	+	1951	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	49	2840	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116364797	116398280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
Isoform_53255_41	chr4	+	3585	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	20	-17	20	17	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTAGTGCCCAGGA	NA	False	NA	29	True	AATAAA	-35	NA	116414874	116451096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
Isoform_53256_3	chr4	+	3301	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	87	-175	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	91.9456361117807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTCTTGTGTAAGAAAT	NA	False	NA	14	True	AATAAA	-18	NA	116414941	116450904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002_116450638_116450662
Isoform_53257_104	chr4	+	3364	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	55	-143	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	91.9456361117807	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGAGAGTGGATTCTT	NA	False	NA	6	True	AATATA	-10	NA	116414909	116450936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002_116450639_116450664
Isoform_53258_3	chr4	+	3484	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	-39	143	-39	-143	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGAGAGTGGATTCTT	NA	False	NA	6	True	AATATA	-10	NA	116414815	116450936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
Isoform_5326_148	chr11	-	796	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	23	-6	23	6	multi-exon	FALSE	canonical	3	574	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAATGCTTTTCCT	5207	False	NA	-6	True	ATTAAA	-20	NA	51579457	51576206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51576920_51579374
Isoform_53263_9578	chr4	+	927	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	59	1308	4	242	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	9578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116542799	116556711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
Isoform_5327_10	chr11	-	823	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	574	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	5174	False	NA	-12	True	ATTAAA	-14	NA	51579490	51576212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51576920_51579374
Isoform_53278_3	chr4	+	1074	9	NIC	ENSMUSG00000028689.15	novel	1112	10	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.2671307857243	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTCTCTGTAAATC	5642	False	NA	13	True	AATAAA	-17	NA	116565791	116572298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116565854_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
Isoform_53279_94	chr4	+	2883	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	11	139	-10	1	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAGCCTTATTTGTACC	NA	False	NA	NA	False	AATAAA	-18	NA	116578155	116661300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_53280_43	chr4	+	3025	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	15	-7	-6	7	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATTTTGCTGTATAG	NA	False	NA	10	True	ATTAAA	-23	NA	116578159	116661446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_53284_4	chr4	+	3026	11	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	9	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	15.7445228571716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTTTGCTGTATA	NA	False	NA	9	True	ATTAAA	-22	NA	116578153	116661445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658649_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_53285_3	chr4	+	2730	10	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	7	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.0670428199288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATTTTGCTGTATAG	NA	False	NA	10	True	ATTAAA	-23	NA	116578151	116661446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116578454_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
Isoform_53286_25	chr4	+	1757	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGGGCTTTCTCT	NA	False	NA	36	True	AATAAA	-26	NA	116664919	116676638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
Isoform_53287_7	chr4	+	1754	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	59.4809580874417	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTGTGTGTGTATA	NA	False	NA	NA	False	AAGAAA	-22	NA	116664939	116675970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116675766
Isoform_53288_36	chr4	+	1635	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	23	-4	-2	-3	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGAACTTTCTGGGCT	NA	False	NA	30	True	AATAAA	-20	NA	116664942	116676632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
Isoform_53289_6	chr4	+	1855	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-3	1	intron_retention	FALSE	canonical	3	103	junction_1	29.7890542834451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGGGCTTTCTCT	NA	False	NA	36	True	AATAAA	-26	NA	116664931	116676638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
Isoform_53290_103	chr4	+	3496	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	-3	1090	-3	738	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGCTTTTGGGATCC	NA	False	NA	12	True	AATAAA	-20	NA	116852510	116861384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
Isoform_53291_3	chr4	+	4570	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	5	8	5	-8	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCACGTATATATATG	NA	False	NA	NA	False	ATTAAA	-11	NA	116852518	116862466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
Isoform_53294_5	chr4	+	1636	7	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	20	6999	20	6936	5prime_fragment	FALSE	canonical	3	594	junction_5	54.2760434159389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	116876624	116923458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537
Isoform_53295_5	chr4	+	1986	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	24	-455	18	1	multi-exon	FALSE	canonical	3	567	junction_7	49.9305302519377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116876622	116944504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
Isoform_53296_300	chr4	+	1527	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	24	4	18	0	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876622	116944045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
Isoform_53298_4	chr4	+	1434	11	NIC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	197.922232202449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGGCTCAGTGGTA	NA	False	NA	17	True	AATAAA	-17	NA	116876604	116944046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
Isoform_5330_4	chr11	-	3837	23	FSM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	188	2556	1	-185	multi-exon	FALSE	canonical	3	47	junction_21	10.4921261307612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTTCTCATTTTTT	3781	False	NA	-1	True	AATAAA	-17	NA	51647257	51585646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
Isoform_53300_8	chr4	+	4401	22	FSM	ENSMUSG00000028681.12	ENSMUST00000030443.12	4382	22	-22	3	-22	-3	multi-exon	FALSE	canonical	3	5	junction_3	13.5888776715328	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGATGGCTGGAGT	NA	False	NA	-1	True	AATATA	-13	NA	116953249	116972577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
Isoform_53302_16	chr4	+	2520	10	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13406	1	-733	-1	3prime_fragment	FALSE	canonical	3	29	junction_6	5.35412613473634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGATGGCTGGAGTTT	NA	False	NA	1	True	AATATA	-15	NA	116966698	116972579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
Isoform_53303_10	chr4	+	946	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	46	-1	-43	1	multi-exon	FALSE	canonical	3	16	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTATCTATCCTGGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	117109193	117125778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_117109332_117123056_117123173_117125086
Isoform_53304_76	chr4	+	1705	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	0	14	0	2	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407561	117531480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_53305_5	chr4	+	1768	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	255.666011380082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTCCTAGTGTGTCT	NA	False	NA	2	True	AATAAA	-9	NA	117407555	117531471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
Isoform_53306_21	chr4	+	1707	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	238.585938395371	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407551	117531478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_5331_5	chr11	-	2233	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7180	1584	-16	-1584	3prime_fragment	FALSE	canonical	3	83	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAACCTAAA	3757	False	NA	NA	False	NA	NA	NA	51647281	51632972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_51634828_51646903
Isoform_53316_45	chr4	+	3309	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	170	0	-112	0	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692417	117726502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_53317_3	chr4	+	3434	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-126	0	intron_retention	FALSE	canonical	2	62	junction_6	14.1598022585063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692403	117726502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_53318_4	chr4	+	3549	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-119	4	intron_retention	FALSE	canonical	3	85	junction_3	9.86101766662486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692410	117726497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
Isoform_53319_21	chr4	+	925	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	11	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	6.43333157097011	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	118217197	118219941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
Isoform_5332_11	chr11	-	1712	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	21	59	16	-59	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCTCTAGTAG	NA	False	NA	-1	True	AGTAAA	-15	NA	51891290	51876382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_53320_7	chr4	+	983	7	NIC	ENSMUSG00000006395.17	novel	936	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	22	junction_3	5.56776436283002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	118217213	118219941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
Isoform_53322_170	chr4	+	1173	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-29	1	0	1	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266533	118272307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_53325_20	chr4	+	1109	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	24	1	-5	1	multi-exon	FALSE	canonical	3	157	junction_2	198.998673920763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266557	118272307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_53326_6	chr4	+	1265	7	NIC	ENSMUSG00000006392.17	novel	635	5	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	242.454577647489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118266604	118272307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_118266747_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_53329_3	chr4	+	1179	6	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	531	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	251.673280266301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCATTCCTTGTCCT	NA	False	NA	31	True	NA	NA	NA	118268075	118272307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_118268201_118268854_118269050_118269548_118269690_118269860_118269943_118270823_118271073_118271920
Isoform_53331_56	chr4	+	1442	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	31	338	-1	2	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	False	NA	3	True	ATTAAA	-16	NA	118285320	118289812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
Isoform_53332_33	chr4	+	1479	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	-6	338	-6	2	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	False	NA	3	True	ATTAAA	-16	NA	118285283	118289812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
Isoform_53333_3	chr4	+	911	3	FSM	ENSMUSG00000028536.13	ENSMUST00000030261.6	958	3	35	12	35	-12	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGCATAAGGAGTCTT	8975	False	NA	NA	False	NA	NA	NA	118384474	118387413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118384535_118386395_118386509_118386675
Isoform_53339_16	chr4	+	2911	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	46	3	-3	-3	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTGGTCATGATGTCT	NA	False	NA	3	True	NA	NA	NA	118478041	118484970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
Isoform_53340_922	chr4	+	1117	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	46	1797	-3	361	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATACTCTTGGGTTAAAA	NA	False	NA	17	True	AATAAA	-17	NA	118478041	118483176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
Isoform_53345_2351	chr4	+	2512	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	93	655	0	-2	multi-exon	FALSE	canonical	3	565	junction_3	58.8236535946402	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCAAATGCTTG	669	False	NA	34	True	TATAAA	-16	NA	118966000	118994525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
Isoform_53346_394	chr4	+	2563	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	42	655	42	-2	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCAAATGCTTG	618	False	NA	34	True	TATAAA	-16	NA	118965949	118994525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
Isoform_53359_172	chr4	+	674	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	59	0	-42	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052561	119058495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119052684_119053068_119053219_119058093
Isoform_53360_10	chr4	+	762	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	-30	1	-30	-1	multi-exon	FALSE	canonical	3	443	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTTGTTCTTGCTTTAGA	NA	False	NA	10	True	AATAAA	-13	NA	119052472	119058494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119052684_119053068_119053219_119058093
Isoform_53364_811	chr4	+	2586	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	2	600	2	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTTTGTTCCAAGAG	NA	False	NA	8	True	AATAAA	-20	NA	119090113	119105569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_53365_411	chr4	+	2619	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-28	597	-28	3	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTTGTTCCAAGAGAGA	NA	False	NA	11	True	AATAAA	-23	NA	119090083	119105572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_53366_78	chr4	+	3176	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	15	-3	-9	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGTTTGTGTAT	NA	False	NA	4	True	NA	NA	NA	119090126	119106172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_53367_30	chr4	+	3219	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-28	-3	-28	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGTTTGTGTAT	NA	False	NA	4	True	NA	NA	NA	119090083	119106172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
Isoform_53374_3	chr4	+	4609	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	50	1	31	-1	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119396934	119486315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
Isoform_53376_13	chr4	+	3347	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	2	4	2	-4	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCGTGTCTTTTTAA	NA	False	NA	8	True	AATAAA	-10	NA	120262505	120387377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_53377_3	chr4	+	3175	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_16	17.5316677757708	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTCTTTTTAACCAGTT	NA	False	NA	14	True	AATAAA	-16	NA	120262569	120387383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386444
Isoform_53378_5	chr4	+	1556	5	FSM	ENSMUSG00000000085.17	ENSMUST00000136801.8	1536	5	-23	3	-23	-3	multi-exon	FALSE	canonical	3	10	junction_1	26.8735464723211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCGTGTCTTTTTAAC	NA	False	NA	9	True	AATAAA	-11	NA	120374799	120387378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
Isoform_53379_4	chr4	+	1881	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	-23	241	-23	-241	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCTGTACACATCCTT	NA	False	NA	NA	False	NA	NA	NA	120711989	120741400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
Isoform_53380_7	chr4	+	1734	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-3	4774	0	245	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTCTTGCCCATGGA	NA	False	NA	NA	False	NA	NA	NA	120712012	120749002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
Isoform_53381_3	chr4	+	2678	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-15	3842	-12	1177	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGAAGGCTGGCTCTGG	NA	False	NA	NA	False	NA	NA	NA	120712000	120749934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
Isoform_53383_114	chr4	+	2676	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	246	2	-117	-2	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACTTCTTGTGGATGA	NA	False	NA	19	True	AATAAA	-20	NA	120896827	120912517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_53384_3	chr4	+	3013	31	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-120	-4	intron_retention	FALSE	canonical	3	39	junction_2	8.74350552632575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGACTTCTTGTGGAT	NA	False	NA	17	True	AATAAA	-18	NA	120896824	120912515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_53385_5	chr4	+	2629	31	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-147	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	12.6901536633722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGACTTCTTGTGGAT	NA	False	NA	17	True	AATAAA	-18	NA	120896797	120912515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_120896984_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_53386_221	chr4	+	2290	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	4	87	0	-87	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTATCATTTTCAGT	NA	False	NA	16	True	AATAAA	-14	NA	122730038	122752784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
Isoform_53389_85	chr4	+	3155	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	132	6	-23	-6	multi-exon	FALSE	canonical	3	37	junction_1	34.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3603	False	NA	NA	False	AATAAA	-12	NA	122889868	122896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_53390_15	chr4	+	3328	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	-41	6	-41	-6	multi-exon	FALSE	canonical	3	37	junction_1	34.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3430	False	NA	NA	False	AATAAA	-12	NA	122889695	122896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_53391_60	chr4	+	3187	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	97	9	-58	-9	multi-exon	FALSE	canonical	3	37	junction_1	34.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAATGTCAGAGTGG	3568	False	NA	NA	False	AATAAA	-9	NA	122889833	122896269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122889944_122890306_122890812_122893697
Isoform_53392_79	chr4	+	3528	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-33	6	-33	-6	multi-exon	FALSE	canonical	3	106	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3593	False	NA	NA	False	AATAAA	-12	NA	122889858	122896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122890812_122893697
Isoform_53393_10	chr4	+	3643	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-148	6	7	-6	multi-exon	FALSE	canonical	3	106	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTCAGAGTGGGGG	3478	False	NA	NA	False	AATAAA	-12	NA	122889743	122896272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122890812_122893697
Isoform_53395_134	chr4	+	2060	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	14	0	-14	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910389	122948728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_53398_4	chr4	+	1954	10	FSM	ENSMUSG00000028653.17	ENSMUST00000147165.8	1964	10	-3	13	-3	-13	multi-exon	FALSE	canonical	3	16	junction_8	29.573929126016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCTATACAGCATG	NA	False	NA	13	True	AATAAA	-17	NA	122910386	122948729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
Isoform_53399_3	chr4	+	1947	10	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	30.5593936983356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910389	122948728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_53400_4	chr4	+	2145	12	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	39.9505893170158	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910389	122948728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122938958_122939044_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
Isoform_53401_3	chr4	+	2191	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-6	755	-6	-755	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATCCATAGTCCTTG	110	False	NA	NA	False	ATTAAA	-17	NA	122998951	123019129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
Isoform_53402_27	chr4	+	3084	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	-46	12	-39	-2	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176578	123192613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_53404_8	chr4	+	3048	15	NNC	ENSMUSG00000011257.20	novel	3050	15	NA	NA	-38	5	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_10	121.385370466401	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTGATGCCAGTTTT	NA	False	NA	3	True	AATAAA	-26	NA	123176579	123192620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
Isoform_53408_222	chr4	+	3130	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-123	12	-37	-2	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176580	123192613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_5341_62	chr11	-	994	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	36	762	31	408	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTTGTCACTTATTT	NA	False	NA	-2	True	AATACA	-14	NA	51891275	51877085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
Isoform_53412_6	chr4	+	3231	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-225	13	-139	-3	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123176478	123192612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_53415_38	chr4	+	3090	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGAATTTGATGC	NA	False	NA	-4	True	AATAAA	-19	NA	123176578	123192613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
Isoform_53417_38	chr4	+	3052	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	-38	97	-38	-4	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGATGCCAGTTTTA	NA	False	NA	4	True	AATAAA	-27	NA	123176579	123192621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
Isoform_53419_7	chr4	+	2992	14	NNC	ENSMUSG00000011257.20	novel	3111	14	NA	NA	-30	-4	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_10	120.71542162355	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	NA	False	NA	-6	True	AATAAA	-17	NA	123176587	123192611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191845_123192305
Isoform_53426_3	chr14	-	555	1	FSM	ENSMUSG00000062093.6	ENSMUST00000081204.6	1891	1	1689	-353	1689	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGAGTTCCTGA	NA	False	NA	NA	False	AATAAA	-21	NA	90134213	90133658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_-_90133700_90134200
Isoform_53427_4	chr4	+	382	4	FSM	ENSMUSG00000028647.14	ENSMUST00000106202.4	1536	4	88	1066	-39	287	multi-exon	FALSE	canonical	3	305	junction_3	15.9652400197707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTATCTGACCAAAT	NA	False	NA	NA	False	NA	NA	NA	123798794	123803803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629
Isoform_53429_30	chr4	+	1494	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	172	19	-37	-19	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTTGTTTTGTTAAT	NA	False	NA	21	True	NA	NA	NA	123798796	123806043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_53430_6	chr4	+	2668	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	159	-1142	-50	1142	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAATCAATAAT	NA	False	NA	NA	False	NA	NA	NA	123798783	123807204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_53432_41	chr4	+	562	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	170	953	-39	74	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGTCTTAAAGCAGGA	NA	False	NA	10	True	AATAAA	-17	NA	123798794	123805109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
Isoform_53435_198	chr4	+	2566	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	21	6	-7	-2	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGTGTTTGTTGTGTG	NA	False	NA	14	True	AATAAA	-14	NA	123811259	123830784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
Isoform_53440_152	chr4	+	1736	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	40	44	40	-44	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCCAGCCCTTGTT	NA	False	NA	7	True	ATTAAA	-14	NA	124608608	124626209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
Isoform_53441_129	chr4	+	1761	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	40	19	40	-19	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTTTCTGAAACCCA	NA	False	NA	32	True	AATAAA	-19	NA	124608608	124626234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
Isoform_53443_5	chr4	+	3829	24	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	non_canonical	1	2	junction_1	65.4918861047508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGGTTCTCTCTTTTT	NA	False	NA	20	True	AATATA	-28	NA	124635642	124695302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_124635710_124636234_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_53444_33	chr4	+	3804	24	FSM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	5	0	-3	0	multi-exon	FALSE	non_canonical	1	6	junction_2	64.214933278441	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124635647	124695304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_53446_170	chr4	+	2964	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9779	0	9751	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645421	124695304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
Isoform_53447_21	chr4	+	782	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	0	-1	0	1	multi-exon	FALSE	canonical	3	116	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAATTCATGTTTATAC	352	False	NA	5	True	AATAAA	-16	NA	124696374	124699172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124696437_124698452
Isoform_53449_6	chr4	+	2707	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	11	4913	11	-4492	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAAGGGTGTGGTTTCC	330	False	NA	4	True	CATAAA	-8	NA	124696352	124738680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
Isoform_53451_3	chr4	+	2707	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	8	-4492	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	26.0967430918113	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAAGGGTGTGGTTTCC	327	False	NA	4	True	CATAAA	-8	NA	124696349	124738680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736323_124736385_124737939
Isoform_53455_278	chr4	+	1532	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	98	4	98	-4	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTAAATGGTTTAT	1632	False	NA	39	True	ATTAAA	-14	NA	124744569	124749031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
Isoform_53456_90	chr4	+	1562	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	68	4	68	-4	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTAAATGGTTTAT	1602	False	NA	39	True	ATTAAA	-14	NA	124744539	124749031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
Isoform_53458_11	chr4	+	2088	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-604	-760	68	-4	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTAAATGGTTTAT	1602	False	NA	39	True	ATTAAA	-14	NA	124744539	124749031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
Isoform_53460_13	chr4	+	2839	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	3	26	junction_1	9.3936148526539	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGACATTTGGTAAATA	NA	False	NA	3	True	AATAAA	-17	NA	124830848	124838447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
Isoform_53466_300	chr4	+	2335	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	35	-4	-31	0	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923819	124949173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
Isoform_53468_12	chr4	+	2404	4	NIC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	40.7785346584314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTAGAGGGTATTACT	NA	False	NA	11	True	AATAAA	-17	NA	124960485	124967832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_124960746_124961799_124961986_124964899_124965484_124966458
Isoform_53469_132	chr4	+	2312	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	21	12	-9	-12	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGCCTCATTTTAGAG	NA	False	NA	2	True	AATAAA	-8	NA	124960485	124967823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
Isoform_53471_3	chr4	+	2300	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	70	-25	40	25	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGACTTGTTCATAGG	NA	False	NA	39	True	AATAAA	-45	NA	124960534	124967860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
Isoform_53472_10	chr4	+	1052	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	-23	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	14	True	ATTAAA	-20	NA	124978903	124997675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
Isoform_53473_45	chr4	+	1228	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	0	-174	0	-1	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGGCAGCTGCCTCTT	NA	False	NA	39	True	ACTAAA	-15	NA	124978956	125003681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
Isoform_53474_60	chr4	+	1175	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	27	3348	-3	1	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCAGCTGCCTCTTTG	NA	False	NA	41	True	ACTAAA	-17	NA	124978953	125003683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
Isoform_53476_3	chr4	+	1351	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	30	3169	0	180	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATGTGCTCCTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	124978956	125003862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
Isoform_53477_16	chr4	+	858	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	13	1	0	-1	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGGCAGCTGCCTCTT	NA	False	NA	39	True	ACTAAA	-15	NA	124978956	125003681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
Isoform_53481_336	chr4	+	887	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	53	-3	1	3	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATGGAAGATGGCCT	NA	False	NA	30	True	AATAAA	-15	NA	125940770	125949328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
Isoform_53486_13	chr4	+	782	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	24	2	17	-2	multi-exon	FALSE	canonical	3	54	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGTCTGTGCCTGATG	NA	False	NA	25	True	CATAAA	-16	NA	125990469	125992372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_125990501_125991621
Isoform_53487_9	chr4	+	843	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	-36	1	-6	-1	multi-exon	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACGTCTGTGCCTGATGC	NA	False	NA	26	True	CATAAA	-17	NA	125990409	125992373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_125990501_125991621
Isoform_53488_109	chr4	+	845	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	96	2	59	1	multi-exon	FALSE	canonical	3	289	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTGTGCCTGATGCCC	NA	False	NA	28	True	CATAAA	-19	NA	125990511	125992375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_125990603_125991621
Isoform_53491_147	chr4	+	3487	11	FSM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	2	3	2	-2	multi-exon	TRUE	canonical	3	325	junction_5	16.9944108459223	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGTAGCCTGCCT	NA	False	NA	19	True	AATAAA	-20	NA	125997766	126034819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
Isoform_53495_119	chr4	+	957	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	1	-57	-1	multi-exon	FALSE	canonical	3	53	junction_1	143	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	19	True	AATGAA	-14	NA	126042267	126043666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126042425_126042676_126042839_126043028
Isoform_53496_372	chr4	+	891	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	1	-57	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	7073	False	NA	20	True	AATGAA	-15	NA	126042267	126043667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126042425_126042743_126042839_126043028
Isoform_5350_5	chr11	-	998	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-5	-408	-5	408	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTTTGTCACTTATTT	NA	False	NA	-2	True	AATACA	-14	NA	51891594	51877085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
Isoform_53500_86	chr4	+	797	2	NIC	ENSMUSG00000050212.5	novel	1364	3	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	21	True	AATGAA	-16	NA	126042267	126043668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126042425_126043028
Isoform_53501_69	chr4	+	1209	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-57	-8	-57	-1	multi-exon	FALSE	canonical	3	339	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	19	True	AATGAA	-14	NA	126042267	126043666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126042839_126043028
Isoform_53502_9	chr4	+	1284	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-131	-9	-131	0	multi-exon	FALSE	canonical	3	339	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	6999	False	NA	20	True	AATGAA	-15	NA	126042193	126043667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126042839_126043028
Isoform_53503_260	chr4	+	1285	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	50	1	-25	-1	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCCTGTTTTCCTTC	7675	False	NA	44	True	AATAAA	-24	NA	126156167	126169675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
Isoform_53504_4	chr4	+	2097	4	NIC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	-28	-7	intron_retention	FALSE	canonical	3	373	junction_3	14.0554457615387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAATCCTGTCCTGTTT	7672	False	NA	38	True	AATAAA	-18	NA	126156164	126169669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126156331_126166470_126166569_126166767_126167866_126168934
Isoform_53507_6	chr4	+	2886	15	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-6	28	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	14.8839044690867	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATGACAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	126450781	126471569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405
Isoform_53510_2170	chr4	+	816	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	37	6	-12	-6	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATCTTTCTGGGTTTG	5417	False	NA	13	True	AATAAA	-15	NA	126571459	126603501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
Isoform_53511_222	chr4	+	841	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	12	6	12	-6	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATCTTTCTGGGTTTG	5392	False	NA	13	True	AATAAA	-15	NA	126571434	126603501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
Isoform_53516_10	chr4	+	4266	21	ISM	ENSMUSG00000028830.15	ENSMUST00000102608.10	4073	24	0	15734	0	0	5prime_fragment	FALSE	canonical	2	17	junction_1	12.2363188909083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647347	126748129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_126647456_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_53517_4	chr4	+	4378	21	NIC	ENSMUSG00000028830.15	novel	4073	24	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	14.5995719115322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647338	126748127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126647561_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_53518_3	chr4	+	4200	21	NIC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.138031576133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647594	126748127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126647639_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_53520_30	chr4	+	4354	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	30	0	6	0	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647592	126748129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
Isoform_53523_19	chr4	+	2619	9	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-3	3157	-3	64	5prime_fragment	FALSE	canonical	3	697	junction_1	107.230403221288	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCCAAACT	NA	False	NA	NA	False	NA	NA	NA	126915113	126921872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189
Isoform_53524_527	chr4	+	2513	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-3	955	-3	-955	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATCTTCAACTTTGC	NA	False	NA	10	True	AATAAA	-18	NA	126915113	126924074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_53525_429	chr4	+	3027	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-3	441	-3	-441	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTCATGTATTACTT	NA	False	NA	16	True	ATTAAA	-16	NA	126915113	126924588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_53527_21	chr4	+	2546	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-37	956	-37	-956	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATCTTCAACTTTG	NA	False	NA	9	True	AATAAA	-17	NA	126915079	126924073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_53528_14	chr4	+	3061	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-37	441	-37	-441	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTCATGTATTACTT	NA	False	NA	16	True	ATTAAA	-16	NA	126915079	126924588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_5353_4	chr11	-	3441	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	-1	405	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGACTTTGTCACTTA	NA	False	NA	-5	True	AATACA	-11	NA	51891307	51877088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
Isoform_53530_16	chr4	+	3462	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-1	4	-1	-4	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTTGATTTCTTCCCA	NA	False	NA	22	True	AATAAA	-18	NA	126915115	126925025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
Isoform_53534_66	chr4	+	2270	12	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	77	junction_9	288.88503246702	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCTTTGTTCAAGT	NA	False	NA	14	True	AATAAA	-15	NA	126915113	126930802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
Isoform_53536_5	chr4	+	373	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	194	7	-37	-7	multi-exon	FALSE	canonical	3	313	junction_2	16	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTGTCTTTGTTCA	NA	False	NA	11	True	AATAAA	-12	NA	126929436	126930799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_126929648_126930355_126930443_126930724
Isoform_53538_3	chr4	+	5001	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-1	-3	intron_retention	TRUE	canonical	3	69	junction_3	8.41103811251486	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGCCTTTATGTTGG	2757	False	NA	14	True	NA	NA	NA	126971188	127018160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
Isoform_53539_61	chr4	+	1121	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-6	5	-6	-5	multi-exon	FALSE	canonical	3	98	junction_2	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGTGTTGTACTTCGT	NA	False	NA	2	True	NA	NA	NA	127019832	127023432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_127019987_127021611_127021793_127022646
Isoform_5354_6	chr11	-	3445	2	FSM	ENSMUSG00000020390.13	ENSMUST00000124699.2	516	2	116	-3045	116	3045	multi-exon	FALSE	canonical	3	670	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51891190	51885351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_51888726_51891119
Isoform_53540_12	chr4	+	3902	12	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	54.1100806361096	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127062973	127130810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_127063159_127086867_127086951_127088354_127089502_127093460_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
Isoform_53541_292	chr4	+	1012	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	10	0	10	0	multi-exon	FALSE	canonical	3	445	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	29	True	ATTAAA	-18	NA	127137586	127141602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_127137692_127140695
Isoform_53543_15	chr4	+	1944	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	36	-958	36	958	multi-exon	FALSE	canonical	3	445	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGGCTCCAGACTGTGT	NA	False	NA	NA	False	NA	NA	NA	127137612	127142560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_127137692_127140695
Isoform_53544_10	chr4	+	3926	15	FSM	ENSMUSG00000028796.18	ENSMUST00000030588.13	3949	15	14	9	14	-9	multi-exon	FALSE	canonical	1	2	junction_6	86.1216806475061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTCTGTGGCTTTCT	NA	False	NA	11	True	AATAAA	-12	NA	128548508	128646665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_53545_9	chr4	+	2509	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	26	0	26	0	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621403	128646674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
Isoform_53546_9	chr4	+	3757	5	FSM	ENSMUSG00000041000.9	ENSMUST00000035667.9	3752	5	-7	2	1	-2	multi-exon	TRUE	canonical	1	1	junction_4	1.78535710713571	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTACGTTCCATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	128777373	128805119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802828
Isoform_5355_29	chr11	-	2876	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	35	80	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGACTGAGTAGC	NA	False	NA	-9	True	AATAAA	-21	NA	52174123	52143117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_53550_19	chr4	+	901	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	80	5	-49	-5	multi-exon	FALSE	canonical	3	1917	junction_3	119.822535443046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATGTGCAGCACTCATC	2949	False	NA	17	True	ATTAAA	-21	NA	128887096	128902189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
Isoform_53551_1362	chr4	+	1701	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	80	0	-49	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2949	False	NA	29	True	AATAAA	-19	NA	128887096	128905322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
Isoform_53553_121	chr4	+	1781	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2869	False	NA	29	True	AATAAA	-19	NA	128887016	128905322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
Isoform_53559_6	chr4	+	2335	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	-346	3	59	-3	multi-exon	FALSE	canonical	3	28	junction_2	45.8214946831724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCATGTCACTGTCCT	NA	False	NA	13	True	AATAAA	-16	NA	128952260	128978316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
Isoform_5356_6	chr11	-	2978	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	91	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTAGCTGTTTGAGTTA	NA	False	NA	2	True	AATAAA	-32	NA	52174214	52143106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_53560_14	chr4	+	2717	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-187	2	-187	-2	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCATGTCACTGTCCTT	NA	False	NA	14	True	AATAAA	-17	NA	128951876	128978317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
Isoform_53561_17	chr4	+	2660	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-129	1	-129	-1	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	15	True	AATAAA	-18	NA	128951934	128978318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
Isoform_53568_1335	chr4	+	2395	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	143	371	1	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	856	False	NA	25	True	AATAAA	-15	NA	129083695	129113029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
Isoform_53569_1825	chr4	+	2347	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	191	371	49	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	904	False	NA	25	True	AATAAA	-15	NA	129083743	129113029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
Isoform_53571_95	chr4	+	2456	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	82	371	-60	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	795	False	NA	25	True	AATAAA	-15	NA	129083634	129113029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
Isoform_5358_4	chr11	-	3057	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	23	83	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	83.2218979447156	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174135	52143114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_5359_53	chr11	-	2965	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	22	83	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGACTGAGTAGCTGT	NA	False	NA	-6	True	AATAAA	-24	NA	52174136	52143114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_53591_5	chr4	+	2811	4	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	5492	-823	5478	823	3prime_fragment	FALSE	canonical	2	3	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGGTCTATTATGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	129186901	129203175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834
Isoform_53592_8	chr4	+	770	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	275	2788	-42	50	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTGTACTTGGTCAT	NA	False	NA	67	True	AATGAA	-19	NA	129229762	129240876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_53593_95	chr4	+	675	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	311	2847	-6	-9	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAAACCAGTGTGTAG	NA	False	NA	8	True	TTTAAA	-15	NA	129229798	129240817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_53594_49	chr4	+	1073	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-87	2847	-87	-9	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAAACCAGTGTGTAG	NA	False	NA	8	True	TTTAAA	-15	NA	129229400	129240817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_53595_64	chr4	+	711	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	275	2847	-42	-9	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAAACCAGTGTGTAG	NA	False	NA	8	True	TTTAAA	-15	NA	129229762	129240817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_53597_3	chr4	+	1130	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-81	2784	-81	54	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTACTTGGTCATTTGA	NA	False	NA	71	True	AATGAA	-23	NA	129229406	129240880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
Isoform_53599_147	chr4	+	2719	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	103	1	0	-1	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAAGTGTCCGGGGATG	NA	False	NA	63	True	ATTAAA	-14	NA	129355476	129382290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
Isoform_536_501	SIRV7	-	944	5	FSM	SIRV7A	SIRV706	949	5	0	5	0	1	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTAAGAGATCGACG	NA	False	NA	NA	False	NA	NA	NA	147957	56036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
Isoform_53601_4	chr4	+	2627	11	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	36.7662889070953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGAAGTGTCCGGGGAT	NA	False	NA	62	True	ATTAAA	-13	NA	129355476	129382289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
Isoform_53603_4	chr4	+	2643	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.0511574074013	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTACAGATTTGC	NA	False	NA	15	True	AATAAA	-11	NA	129355476	129382242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833_129381318_129381345
Isoform_53605_3311	chr4	+	1545	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	50	10	50	-10	multi-exon	FALSE	canonical	3	8029	junction_1	0	3311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	14	True	AATAAA	-14	NA	129407423	129409768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129407710_129408509
Isoform_5361_16	chr11	-	3025	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-39	82	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174197	52143115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_53614_12	chr4	+	1432	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	-1	6	-1	1	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCTTAGCAAATGTT	3175	False	NA	10	True	AATAAA	-10	NA	129494471	129502315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
Isoform_53620_13	chr4	+	1528	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-8	-1	1	1	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCTTAGCAAATGTT	3188	False	NA	10	True	AATAAA	-10	NA	129494484	129502315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
Isoform_53626_3	chr4	+	3089	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	18443	28	0	-3	3prime_fragment	FALSE	canonical	3	2484	junction_4	143.886239786854	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129732943	129743768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
Isoform_53629_4	chr4	+	3923	26	ISM	ENSMUSG00000028782.15	ENSMUST00000106015.9	4982	29	14680	2	-3128	-2	3prime_fragment	TRUE	canonical	2	2	junction_18	8.10293773886977	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	1495	False	NA	7	True	AATAAA	-13	NA	129900540	129916424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129908727_129908827_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
Isoform_53630_6	chr4	+	3826	25	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3128	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	5.46055934253382	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1495	False	NA	9	True	AATAAA	-15	NA	129900540	129916426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
Isoform_53631_211	chr4	+	1493	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	62	-4	62	3	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGACTGTGTGTCCGT	9340	False	NA	29	True	AATAAA	-36	NA	130001410	130021931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_53632_1178	chr4	+	676	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	143	4	143	-4	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202530	130209252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
Isoform_53633_58	chr4	+	707	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	112	4	112	-4	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202499	130209252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
Isoform_53639_105	chr4	+	1566	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	21	-3	21	3	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGTGACTTGGATT	NA	False	NA	25	True	ATTAAA	-26	NA	130253945	130283822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
Isoform_53640_464	chr4	+	1544	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	43	-3	-19	3	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGTGACTTGGATT	NA	False	NA	25	True	ATTAAA	-26	NA	130253967	130283822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
Isoform_53645_15	chr4	+	2707	7	FSM	ENSMUSG00000078532.10	ENSMUST00000180884.8	1028	7	-210	-1469	-3	1469	multi-exon	TRUE	canonical	3	9	junction_3	30.3790863735052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTGTCTTGCCCTCTT	NA	False	NA	17	True	ATTAAA	-23	NA	130297193	130341113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339177_130339331
Isoform_53648_132	chr4	+	2708	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-21	-1485	-21	1469	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTGTCTTGCCCTCTT	NA	False	NA	17	True	ATTAAA	-23	NA	130297175	130341113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
Isoform_53650_3	chr4	+	1234	4	FSM	ENSMUSG00000028580.16	ENSMUST00000122847.2	1273	4	24	15	4	-15	multi-exon	FALSE	canonical	3	442	junction_3	83.2119115404893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGATAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	130390700	130446177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464
Isoform_53652_18	chr4	+	4021	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	218	junction_8	114.255134797804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390677	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53654_12	chr4	+	4024	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	49	1316	3	-6	multi-exon	FALSE	canonical	3	218	junction_8	122.217214904643	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390680	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53656_5	chr4	+	5338	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	48	3	2	-1	multi-exon	FALSE	canonical	3	218	junction_8	122.217214904643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390679	130508872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53659_5	chr4	+	3774	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	153.602115870843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390687	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53660_8	chr4	+	5315	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-1	-1297	-1	1	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTGCTCTCACTTC	NA	False	NA	23	True	AATACA	-17	NA	130390695	130508874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53661_30	chr4	+	3997	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	2	18	2	-6	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390698	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53665_28	chr4	+	4022	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-37	6	2	-6	multi-exon	FALSE	canonical	3	304	junction_17	105.62885866236	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390679	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53666_3	chr4	+	3819	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-62	234	-15	-234	multi-exon	TRUE	canonical	3	304	junction_17	105.62885866236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTCCAAAAAACAGAATCA	NA	False	NA	NA	False	NA	NA	NA	130390654	130507331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53667_6	chr4	+	3758	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	140.971131796549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390700	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53669_3	chr4	+	3795	21	NIC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	147.35890709421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390669	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_5367_111	chr11	-	2930	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-74	1762	-74	1304	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAAGTTGTCAACTT	NA	False	NA	-46	True	ATTAAA	-14	NA	53191358	53152402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
Isoform_53671_7	chr4	+	3738	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	160.016221476868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390672	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53673_7	chr4	+	3728	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390679	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53674_4	chr4	+	3715	20	FSM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	29	1314	2	-6	multi-exon	FALSE	canonical	3	63	junction_3	153.52394310997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390698	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53675_4	chr4	+	3497	19	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_3	188.126303777115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390679	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53676_15	chr4	+	3271	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	29	1314	2	-6	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390698	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53677_7	chr4	+	3298	18	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	163.478197651144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130390677	130507559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53678_3	chr4	+	4581	18	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	163.478197651144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390707	130508872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53679_3	chr4	+	3932	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	145.296412960016	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	130390676	130507558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_5368_1110	chr11	-	2818	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	38	1762	-8	1304	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAAGTTGTCAACTT	NA	False	NA	-46	True	ATTAAA	-14	NA	53191246	53152402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
Isoform_53680_3	chr4	+	3469	19	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	188.351883714407	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130390676	130507556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
Isoform_53681_5	chr4	+	1401	2	FSM	ENSMUSG00000025743.15	ENSMUST00000146093.2	528	2	-178	-695	-11	695	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	130519836	130545279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130520114_130544155
Isoform_53682_10	chr4	+	4936	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	30	7	30	-7	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTCGTGTGGTGGCCC	NA	False	NA	3	True	AATAAA	-11	NA	130519877	130553623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
Isoform_53683_7	chr4	+	4957	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	7	9	7	-9	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATGTCGTGTGGTGGC	NA	False	NA	1	True	AATAAA	-9	NA	130519854	130553621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
Isoform_53684_7	chr4	+	2558	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640438	130663450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
Isoform_53686_13	chr4	+	2463	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-86	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.179487921654	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTCTCATGTGGTTC	NA	False	NA	19	True	AATAAA	-15	NA	130640532	130663449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
Isoform_53694_7	chr4	+	2044	8	NNC	ENSMUSG00000040533.8	novel	2001	8	NA	NA	-61	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.36808406515884	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCGCTGTACACCCTGGA	1430	False	NA	NA	False	AATAAA	-14	NA	130671634	130682768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681727_130682276
Isoform_53696_142	chr4	+	1321	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	18	-2	-5	2	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCGTGTGGAGGAATG	NA	False	NA	35	True	AATAAA	-35	NA	131570798	131595099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
Isoform_53697_4	chr4	+	2225	9	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	7	-7	intron_retention	FALSE	canonical	3	105	junction_5	17.0861786248418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGGATGAAGAGTACAG	NA	False	NA	16	True	AATAAA	-16	NA	131570787	131595080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
Isoform_53699_21	chr4	+	2840	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600906	131629014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_53701_19	chr4	+	2910	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-91	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600836	131629014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_53703_108	chr4	+	2346	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-92	3	-92	-3	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600835	131629014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_53704_507	chr4	+	2234	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	20	3	20	-3	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACCGCGCTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	131600947	131629014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
Isoform_53706_4	chr4	+	1497	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	14	616	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAGTGTCCATAGGACC	NA	False	NA	25	True	AATAAA	-21	NA	132001699	132020639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_53707_57	chr4	+	1347	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	2	2438	2	616	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAGTGTCCATAGGACC	NA	False	NA	25	True	AATAAA	-21	NA	132001687	132020639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
Isoform_53710_49	chr4	+	608	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
Isoform_53717_593	chr4	+	1369	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	26	6	0	-6	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGATGGTCTCCTCC	2357	False	NA	13	True	AATAAA	-13	NA	132262886	132281047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
Isoform_53722_8	chr4	+	2635	18	NIC	ENSMUSG00000028886.16	novel	5186	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	22.5258021989425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366389	132449446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
Isoform_53723_44	chr4	+	2497	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	33	2630	0	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366389	132449446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
Isoform_53724_36	chr4	+	2523	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	8	2629	-2	1	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAAGTTCTGTCCCAGG	NA	False	NA	29	True	NA	NA	NA	132366364	132449447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
Isoform_53725_381	chr4	+	1530	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	13	270	13	-270	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTCTGAAATGTTGGT	NA	False	NA	25	True	GATAAA	-15	NA	132495658	132505793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
Isoform_53726_6	chr4	+	1788	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	20	5	20	-5	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAACTGTCGCCCCTGGCC	NA	False	NA	2	True	AGTAAA	-19	NA	132495665	132506058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
Isoform_53735_7	chr4	+	1863	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	37	3742	2	-490	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGACCATATGCTTCT	NA	False	NA	48	True	NA	NA	NA	132857852	132923325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
Isoform_53736_3	chr4	+	5576	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	41	25	6	-25	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTTGTAGTCACTC	NA	False	NA	19	True	TTTAAA	-24	NA	132857856	132927042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
Isoform_53737_17	chr4	+	908	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	75	3	75	-3	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	17	True	AATAAA	-19	NA	132948195	132951863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
Isoform_53738_5	chr4	+	1283	5	NIC	ENSMUSG00000028865.15	novel	986	6	NA	NA	75	-3	intron_retention	FALSE	canonical	3	38	junction_4	6.80073525436772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	17	True	AATAAA	-19	NA	132948195	132951863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
Isoform_53739_6	chr4	+	4370	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	-36	0	-36	0	multi-exon	TRUE	canonical	2	4	junction_2	5.06727697273075	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	8413	False	NA	18	True	ATTAAA	-18	NA	132968092	132980240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
Isoform_53740_27	chr4	+	4650	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	23	3	23	-3	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCCAGGGCTGCTTCCT	180	False	NA	19	True	AATAAA	-20	NA	133097039	133151010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
Isoform_53743_29	chr4	+	2285	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	2	0	2	0	multi-exon	TRUE	canonical	3	34	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	False	NA	13	True	AATAAA	-17	NA	133207444	133215249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133207875_133213394
Isoform_53745_19	chr4	+	1937	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCCTGGTCATCAG	5471	False	NA	7	True	NA	NA	NA	133246273	133258099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
Isoform_53747_22	chr4	+	1914	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCCTGGTCATCAGT	5554	False	NA	8	True	NA	NA	NA	133246356	133258100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
Isoform_53749_80	chr4	+	2008	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGCCTTAGTGAAGCCT	NA	False	NA	13	True	AATAAA	-20	NA	133302051	133311554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
Isoform_53751_11	chr4	+	3487	11	Fusion	ENSMUSG00000028850.3_ENSMUSG00000028848.14	novel	2004	7	NA	NA	-4	-6	multi-exon	FALSE	canonical	3	33	junction_3	55.2959311342164	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAACGTTTTTTTAGT	NA	False	NA	35	True	NA	NA	NA	133302051	133319040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_53752_8	chr4	+	1291	5	FSM	ENSMUSG00000028848.14	ENSMUST00000105899.2	996	5	-53	-242	4	-3	multi-exon	FALSE	canonical	3	9	junction_1	62.5154980784765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133311676	133319043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133312112_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_53753_116	chr4	+	1354	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	10	3	10	-3	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133311682	133319043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
Isoform_53754_3	chr4	+	1323	5	NNC	ENSMUSG00000028848.14	novel	1367	5	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	76.0604200619481	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGTTTTTTTAGTGTG	NA	False	NA	38	True	NA	NA	NA	133311684	133319043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_133312181_133313220_133313378_133315810_133315972_133317218_133317321_133318636
Isoform_53755_11	chr4	+	2456	19	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	6193	5	-4193	-2	3prime_fragment	FALSE	canonical	3	14	junction_1	44.6930891998105	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCTGCTGGTGGTCTCG	NA	False	NA	12	True	NA	NA	NA	133801955	133819810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_53756_26	chr4	+	1962	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10301	2	-85	1	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133806063	133819813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_53757_42	chr4	+	1154	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13854	0	-6	0	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133809616	133819815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_53758_4	chr4	+	1020	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	40.2478432824529	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809616	133819811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_133809759_133809885_133809999_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_53759_21	chr4	+	1046	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133809609	133819813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
Isoform_53760_20	chr4	+	1560	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	12	1	-8	0	multi-exon	TRUE	canonical	3	35	junction_2	24.8785827078437	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829905	133854086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
Isoform_53763_23	chr4	+	2136	9	FSM	ENSMUSG00000028834.14	ENSMUST00000105875.8	1886	9	-250	0	-250	0	multi-exon	FALSE	canonical	1	4	junction_7	6.8545149354276	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTATGAAAGAAGTGTGA	NA	False	NA	NA	False	AATAAA	-28	NA	134042180	134056940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050549_134052355_134052379_134052894_134053020_134055015_134055094_134056215
Isoform_53765_85	chr4	+	3204	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-57	6	-32	1	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2024	False	NA	10	True	AATAAA	-15	NA	134070459	134081789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_53766_113	chr4	+	3152	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-1	2	-1	-2	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTTGCCTTGCA	2080	False	NA	14	True	AATAAA	-19	NA	134070515	134081793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_53773_5	chr4	+	3478	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-24	-301	1	301	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCTGTGCATC	2057	False	NA	NA	False	TTTAAA	-10	NA	134070492	134082096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_53774_15	chr4	+	3137	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	178	-1292	178	1	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2762	False	NA	10	True	AATAAA	-15	NA	134071197	134081789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
Isoform_53777_5	chr4	+	3087	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	80	-919	-7	-2	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGCTGGCTGGCTTTCTT	1859	False	NA	18	True	ATTAAA	-20	NA	134123710	134154722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
Isoform_53778_3	chr4	+	980	5	FSM	ENSMUSG00000028832.12	ENSMUST00000105867.8	802	5	-10	-168	0	-11	multi-exon	FALSE	canonical	1	1	junction_4	432.634011030108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTCT	NA	False	NA	0	True	AATAAA	-16	NA	134195709	134201143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200632
Isoform_53779_95	chr4	+	1022	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	34	4	34	-4	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCTTTCTGTTCAGG	NA	False	NA	7	True	AATAAA	-23	NA	134195664	134201150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
Isoform_53781_5	chr4	+	2123	3	FSM	ENSMUSG00000037348.16	ENSMUST00000136171.8	890	3	32	-1265	3	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTTGTTTTGACTCCT	NA	False	NA	17	True	AATAAA	-18	NA	134224317	134236122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134224348_134227910_134227995_134234113
Isoform_53782_11	chr4	+	2064	2	FSM	ENSMUSG00000037348.16	ENSMUST00000081525.4	2351	2	290	-3	6	3	multi-exon	FALSE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGACTCCTGTTCC	NA	False	NA	22	True	AATAAA	-23	NA	134224297	134236127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134224348_134234113
Isoform_53783_5	chr4	+	4893	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	8	3653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	208.686367547092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134238317	134254891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_134238481_134248782_134248913_134250264_134251348_134251374
Isoform_53784_221	chr4	+	1248	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	25	2	25	-2	multi-exon	FALSE	canonical	3	435	junction_2	7.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTGGTGTCGTGCTT	NA	False	NA	18	True	AATAAA	-18	NA	134238334	134251236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134238481_134248782_134248913_134250264
Isoform_53788_5	chr4	+	1308	9	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	11775	0	-3499	0	3prime_fragment	FALSE	canonical	3	9	junction_1	6.25999201277446	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAAGGTCTCTTTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	134603621	134623483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_134603813_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_53789_4	chr4	+	1219	8	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	15249	3	-25	-3	3prime_fragment	FALSE	canonical	3	9	junction_1	5.80288457473997	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCACAAGGTCTCTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	134607095	134623480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
Isoform_53797_50	chr4	+	2171	6	FSM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-20	0	-1	0	multi-exon	FALSE	canonical	3	46	junction_4	379.006385170488	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134654130_134654241
Isoform_53799_22	chr4	+	1462	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	31	junction_4	383.058011272444	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134654045_134654130_134654241
Isoform_538_415	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1573.00102987887	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
Isoform_53801_130	chr4	+	2375	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	141	junction_3	314.200075588788	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134654130_134654241
Isoform_53807_30	chr4	+	2126	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
Isoform_53809_205	chr4	+	1417	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	33	299	-1	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
Isoform_53810_21	chr4	+	1447	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	3	299	2	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650905	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
Isoform_53814_24	chr4	+	2135	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	56	junction_3	350.79659348403	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_134651079_134651185_134651794_134652603_134653462_134654045_134654130_134654241
Isoform_53816_797	chr4	+	2719	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	33	299	-1	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
Isoform_53817_36	chr4	+	3011	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	33	7	-1	-7	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGCATTAGTTGTGA	NA	False	NA	2	True	NA	NA	NA	134650935	134654975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
Isoform_53825_72	chr4	+	1277	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	84	8	-28	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	134658292	134664851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_53826_72	chr4	+	903	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	84	382	-28	-382	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATATGTTCACATTTTTG	NA	False	NA	21	True	AATAAA	-27	NA	134658292	134664477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_53830_5	chr4	+	1030	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	-52	391	-52	-391	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCACATGCATATGTTC	NA	False	NA	12	True	AATAAA	-18	NA	134658156	134664468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_53831_4	chr4	+	1391	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	-30	8	-30	-8	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAACAGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	134658178	134664851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
Isoform_53832_14	chr4	+	3951	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	229	2	229	-2	multi-exon	FALSE	canonical	3	21	junction_5	3.02305952453618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCACGCAGTT	NA	False	NA	5	True	AATAAA	-19	NA	135413826	135435490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
Isoform_53833_4	chr4	+	4067	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	109	6	109	-6	multi-exon	FALSE	canonical	3	21	junction_5	3.02305952453618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGCTAATGTGCACGC	NA	False	NA	1	True	AATAAA	-15	NA	135413706	135435486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
Isoform_53834_3	chr4	+	4221	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	-41	2	-41	-2	multi-exon	TRUE	canonical	3	21	junction_5	3.02305952453618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCACGCAGTT	NA	False	NA	5	True	AATAAA	-19	NA	135413556	135435490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
Isoform_53835_3	chr4	+	4659	28	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	15699	6	15699	-6	3prime_fragment	FALSE	canonical	2	3	junction_8	2.88793906512858	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGGCAGCACCCGTGG	6727	False	NA	NA	False	AATAAA	-23	NA	135502724	135542869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
Isoform_53836_78	chr4	+	472	3	FSM	ENSMUSG00000028676.18	ENSMUST00000129718.2	717	3	-7	252	-7	178	multi-exon	FALSE	canonical	3	381	junction_2	671.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGAAAAG	4699	False	NA	NA	False	NA	NA	NA	135583435	135586290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135583603_135585615_135585783_135586152
Isoform_53838_4	chr4	+	556	3	FSM	ENSMUSG00000028676.18	ENSMUST00000129718.2	717	3	-91	252	-71	178	multi-exon	FALSE	canonical	3	381	junction_2	671.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGAAAAG	4615	False	NA	NA	False	NA	NA	NA	135583351	135586290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135583603_135585615_135585783_135586152
Isoform_53839_19	chr4	+	2374	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	127	24	-127	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-23	NA	135648069	135667495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
Isoform_5384_1292	chr11	-	462	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	28	1031	28	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2975	False	NA	-8	True	AATAAA	-17	NA	53321626	53319779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53319978_53321362
Isoform_53840_122	chr4	+	1479	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	1022	24	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	20	True	AATAAA	-20	NA	135648069	135666600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
Isoform_53843_453	chr4	+	1396	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	18	4	1	-4	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	135673776	135689924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
Isoform_53844_100	chr4	+	1402	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	26	2	-4	-2	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGATTCTCACAGATG	4588	False	NA	9	True	AATAAA	-17	NA	135691063	135695487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
Isoform_53845_22	chr4	+	946	3	FSM	ENSMUSG00000007872.4	ENSMUST00000008016.3	1278	3	327	5	-40	-5	multi-exon	FALSE	canonical	3	22	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTATGACATCTTGC	732	False	NA	6	True	AATAAA	-14	NA	135871134	135872698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135871490_135871604_135871688_135872190
Isoform_53850_4	chr4	+	4857	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-120	2	-120	-2	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTTGGTGTGATT	936	False	NA	14	True	ATTAAA	-18	NA	135899584	135923366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
Isoform_53852_37	chr4	+	3901	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	16	308	16	-308	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTTCATCTCATTCT	1338	False	NA	13	True	AAAACA	-25	NA	135933691	135972219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
Isoform_53853_8	chr4	+	4215	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	5	5	5	-5	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGGGTTCTGGTGATTG	1327	False	NA	NA	False	NA	NA	NA	135933680	135972522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
Isoform_53857_5	chr4	+	1290	7	ISM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	5	9433	5	981	5prime_fragment	FALSE	canonical	3	647	junction_4	43.1972221329104	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGTGGCTTGCCAGA	6608	False	NA	NA	False	TATAAA	-32	NA	135975267	135992776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182
Isoform_53858_4	chr4	+	4543	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	3	93	3	-93	multi-exon	FALSE	canonical	2	10	junction_1	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGAGTTATCTTGG	NA	False	NA	14	True	ATTAAA	-20	NA	136013380	136021160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_136013793_136014382_136014627_136017273
Isoform_5386_34	chr11	-	496	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	-6	1031	-2	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2941	False	NA	-8	True	AATAAA	-17	NA	53321660	53319779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53319978_53321362
Isoform_53861_87	chr4	+	2670	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	8	18774	8	-8	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038286	136067984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_53866_109	chr4	+	2650	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	25	8	25	-8	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038303	136067984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_5387_232	chr11	-	407	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	-2	0	2	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2945	False	NA	-8	True	AATAAA	-17	NA	53321656	53319779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53319978_53321362_53321530_53321614
Isoform_53871_148	chr4	+	2501	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	34	8	8	-8	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038286	136067984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_53873_39	chr4	+	2489	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	-32	190	25	-8	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038303	136067984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
Isoform_53879_4	chr4	+	1122	3	ISM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	3	8032	3	620	5prime_fragment	FALSE	canonical	3	86	junction_2	41.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAATCAGAAAATGAAAAG	4160	False	NA	NA	False	AATGAA	-8	NA	136197074	136268598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_136197162_136248651_136248755_136267666
Isoform_53882_9	chr4	+	1392	10	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	-13	58546	-13	-16814	5prime_fragment	FALSE	canonical	3	21	junction_4	6.76227735764575	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCGTCCCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	137196100	137239394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152
Isoform_53883_11	chr4	+	2419	14	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-17	-15391	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	9.74952585707991	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGTGAATATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	137196096	137240817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240281_137240321
Isoform_53884_5	chr4	+	2710	15	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	93179	1	-7189	-1	3prime_fragment	FALSE	canonical	3	34	junction_3	12.8351001522531	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137289292	137297939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
Isoform_5389_3	chr11	-	3355	20	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	2	20182	2	5054	5prime_fragment	FALSE	canonical	3	232	junction_9	31.0777775081753	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGTGGAAGAAGAACG	NA	False	NA	NA	False	NA	NA	NA	53598144	53560527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
Isoform_53891_16	chr4	+	2110	14	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	27	33244	27	-4	5prime_fragment	FALSE	canonical	3	237	junction_13	305.607804510151	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	530	False	NA	NA	False	AATAAA	-2	NA	137321477	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467
Isoform_53892_88	chr4	+	2054	14	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	83	33244	-5	-4	5prime_fragment	FALSE	canonical	3	237	junction_13	305.607804510151	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	586	False	NA	NA	False	AATAAA	-2	NA	137321533	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467
Isoform_53893_20	chr4	+	3528	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	322.560439780494	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53897_374	chr4	+	2055	14	FSM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	12	4	-9	-4	multi-exon	FALSE	canonical	3	659	junction_9	177.170128514572	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	582	False	NA	NA	False	AATAAA	-2	NA	137321529	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_53898_77	chr4	+	2108	14	FSM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	-41	4	26	-4	multi-exon	FALSE	canonical	3	659	junction_9	177.170128514572	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	529	False	NA	NA	False	AATAAA	-2	NA	137321476	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_53902_48	chr4	+	3525	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	11	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	581	False	NA	19	True	AATAAA	-31	NA	137321528	137383653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53904_14	chr4	+	5737	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	555	junction_19	264.570952206992	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	555	False	NA	14	True	ATTAAA	-24	NA	137321502	137385839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53907_38	chr4	+	3471	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	8	8	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	223.123509724359	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	578	False	NA	16	True	AATAAA	-28	NA	137321525	137383650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53908_28	chr4	+	3497	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-15	11	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	223.123509724359	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	555	False	NA	19	True	AATAAA	-31	NA	137321502	137383653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_5391_4	chr11	-	3089	17	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	2	26385	2	-1149	5prime_fragment	FALSE	canonical	3	232	junction_6	31.2909107210065	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTCTTGGTTATAT	NA	False	NA	NA	False	AAAACA	-27	NA	53598144	53566730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
Isoform_53916_47	chr4	+	2059	14	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	314.974367323765	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	578	False	NA	NA	False	AATAAA	-2	NA	137321525	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467
Isoform_53918_19	chr4	+	2082	14	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	314.974367323765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	555	False	NA	NA	False	AATAAA	-2	NA	137321502	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467
Isoform_53924_195	chr4	+	2056	14	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	8	33244	8	-4	5prime_fragment	FALSE	canonical	3	584	junction_9	194.53455299173	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	578	False	NA	NA	False	AATAAA	-2	NA	137321525	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_53925_112	chr4	+	2084	14	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-20	33244	-20	-4	5prime_fragment	FALSE	canonical	3	584	junction_9	194.53455299173	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGGTGTTCCGTGCT	550	False	NA	NA	False	AATAAA	-2	NA	137321497	137352598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
Isoform_53928_20	chr4	+	3553	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-20	2189	-20	11	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	550	False	NA	19	True	AATAAA	-31	NA	137321497	137383653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53934_44	chr4	+	3499	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-20	11	combination_of_known_junctions	FALSE	canonical	3	584	junction_9	231.427832630339	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTGTTTCAGATTTTC	550	False	NA	19	True	AATAAA	-31	NA	137321497	137383653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
Isoform_53941_6	chr4	+	3268	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	41.4733385102208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3342	False	NA	11	True	AATAAA	-21	NA	137392041	137457172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_53942_17	chr4	+	3233	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	7	-1	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	40.9493208845687	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	3344	False	NA	9	True	AATAAA	-19	NA	137392043	137457170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_53943_3	chr4	+	3214	23	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-23	-7	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	41.2645416392114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTACCCGGAGTTAAG	9927	False	NA	3	True	AATAAA	-13	NA	137434809	137457164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_53944_15	chr4	+	3210	23	FSM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	-42	0	-42	0	multi-exon	FALSE	canonical	3	26	junction_1	40.603123480388	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9908	False	NA	11	True	AATAAA	-21	NA	137434790	137457172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_53945_15	chr4	+	1993	10	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1016	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447198	137457172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_53946_17	chr4	+	1948	10	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1061	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447243	137457172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
Isoform_53948_34	chr4	+	1936	10	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12390	2	1040	-1	3prime_fragment	FALSE	canonical	3	83	junction_7	18.9326290948839	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137447222	137457170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_53949_6	chr4	+	2383	9	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1073	-1	intron_retention	FALSE	canonical	3	96	junction_1	15.0893174133226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137447255	137457170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455675_137455838_137455880_137456185
Isoform_53950_3	chr4	+	1865	10	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	1059	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	39.122157530951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447241	137457171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137455040_137455091_137455570_137455675_137455838_137455880_137456185
Isoform_53951_4	chr4	+	3033	8	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	1026	0	intron_retention	FALSE	canonical	3	96	junction_1	15.4166620702328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137447208	137457172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137455675_137455838_137455880_137456185
Isoform_53952_3	chr4	+	4702	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	28	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	NA	False	NA	16	True	AATAAA	-16	NA	137589575	137692540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
Isoform_53953_6	chr4	+	4720	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	480	False	NA	16	True	AATAAA	-16	NA	137640805	137692540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
Isoform_53954_14	chr4	+	3307	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	-12	16	-11	6	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAGCTTAGTGAAAAGT	4553	False	NA	26	True	AATAAA	-24	NA	137943925	137970465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_53955_3	chr4	+	3238	13	NIC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	10	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	30.5586867082559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAGCTTAGTGAAAAGT	4583	False	NA	26	True	AATAAA	-24	NA	137943955	137970465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_53957_21	chr4	+	3102	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	8	3	0	-3	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTTCCAGTACCTGT	4573	False	NA	39	True	AATAAA	-37	NA	137943945	137970478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
Isoform_53958_5	chr4	+	3129	10	FSM	ENSMUSG00000045349.16	ENSMUST00000105824.8	3512	10	12	371	2	-371	multi-exon	FALSE	canonical	1	2	junction_6	2.55796987404919	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCAGAAGTCGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	137977725	137988272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_137977820_137981141_137981270_137981583_137981665_137982008_137982084_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
Isoform_53959_3258	chr4	+	1579	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	146	395	146	-395	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCCCATGACACTGAT	NA	False	NA	39	True	AATAAA	-25	NA	138032186	138039544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_53960_1359	chr4	+	1983	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	128	9	128	-9	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTCCTATCAGTGTTC	NA	False	NA	28	True	NA	NA	NA	138032168	138039930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_53961_196	chr4	+	2087	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	24	9	24	-9	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTCCTATCAGTGTTC	NA	False	NA	28	True	NA	NA	NA	138032064	138039930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_53962_257	chr4	+	1648	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	75	397	75	-397	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCCCCATGACACTG	NA	False	NA	37	True	AATAAA	-23	NA	138032115	138039542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
Isoform_53978_8	chr4	+	1574	5	NIC	ENSMUSG00000041241.13	novel	3944	5	NA	NA	15	896	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	95.7584852637091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGTCCTCTCCGACTC	NA	False	NA	18	True	NA	NA	NA	138162002	138167218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_138162191_138163490_138163711_138164938_138165027_138165552_138165674_138166261
Isoform_53979_26	chr4	+	3658	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	55	20	3	-17	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTTTCTTTCATGAGT	NA	False	NA	4	True	NA	NA	NA	138162036	138169556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
Isoform_53980_18	chr4	+	3703	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	10	20	4	-17	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTTTCTTTCATGAGT	NA	False	NA	4	True	NA	NA	NA	138161991	138169556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
Isoform_53981_142	chr4	+	1333	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	42	2358	-10	896	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGTCCTCTCCGACTC	NA	False	NA	18	True	NA	NA	NA	138162023	138167218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
Isoform_53984_9	chr4	+	3032	17	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.3561048337465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAAGGGTTCTTCTTTT	NA	False	NA	23	True	AATAAA	-14	NA	138700202	138786477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_53985_60	chr4	+	3028	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	290	0	286	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138700505	138786478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_53986_6	chr4	+	3349	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	-30	-1	-13	1	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGGTTCTTCTTTTCA	NA	False	NA	25	True	AATAAA	-16	NA	138700185	138786479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_53989_9	chr4	+	2328	8	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	46752	0	intron_retention	FALSE	canonical	3	62	junction_4	9.15624020512118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138746971	138786478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_5399_39	chr11	-	3134	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-80	8	-80	-8	multi-exon	FALSE	canonical	3	28	junction_7	3.67507453523138	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATACCAATTGAATAC	NA	False	NA	NA	False	AATAAA	-15	NA	53782566	53755375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
Isoform_53993_586	chr4	+	1582	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	32	60	7	0	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	-52	True	NA	NA	NA	138920241	139019069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
Isoform_53995_292	chr4	+	1641	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	32	1	7	-1	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCGCTGGCTGTACGTT	NA	False	NA	7	True	NA	NA	NA	138920241	139019128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
Isoform_54_5	ERCC-00054	+	255	1	FSM	ERCC-00054A	DQ516731	256	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00054_+_0_300
Isoform_5400_4	chr11	-	3059	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-108	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	10.2339813855606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782594	53755374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53781972
Isoform_54004_239	chr4	+	1294	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	-6	0	-6	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	29	True	AATAAA	-40	NA	139038048	139045737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
Isoform_54005_3	chr4	+	4957	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	-10	1279	-4	215	multi-exon	FALSE	non_canonical	0	0	junction_13	89.6176912139138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTTGTTTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	139079893	139104762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
Isoform_54006_45	chr4	+	4927	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	1	-222	1	222	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTGTCTTCAG	NA	False	NA	18	True	AATAAA	-20	NA	139079921	139104769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
Isoform_54008_3	chr4	+	4021	28	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	81197	1	-1403	-1	3prime_fragment	FALSE	canonical	3	204	junction_2	64.6854582174471	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGGTCTAGCTGCTGC	948	False	NA	21	True	AATAAA	-22	NA	139189166	139216840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_54009_4	chr4	+	2765	18	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	87407	3	4807	-3	3prime_fragment	FALSE	canonical	3	267	junction_8	51.5410945660426	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGGGTCTAGCTGCT	1267	False	NA	19	True	AATAAA	-20	NA	139195376	139216838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_5401_7	chr11	-	2915	8	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-119	-7	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	10.8984177844347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782605	53755374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53781972
Isoform_54011_4	chr4	+	2530	16	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	89035	1	6435	-1	3prime_fragment	FALSE	canonical	3	267	junction_6	50.682629064492	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGGTCTAGCTGCTGC	2895	False	NA	21	True	AATAAA	-22	NA	139197004	139216840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
Isoform_54015_7	chr4	+	2475	9	FSM	ENSMUSG00000041025.16	ENSMUST00000174078.2	5716	9	-70	3311	-70	-11	multi-exon	TRUE	canonical	0	0	junction_1	1.79843682124227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAACA	NA	False	NA	NA	False	TTTAAA	-8	NA	139301960	139344382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_139302909_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
Isoform_54017_17	chr4	+	3375	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	-1	8	-1	-5	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTATATTTTGATCG	NA	False	NA	18	True	NA	NA	NA	139350175	139376993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_5402_3	chr11	-	1852	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-74	6421	-74	2716	5prime_fragment	FALSE	canonical	3	28	junction_3	3.37045990927054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCTCTGACTGTTCC	NA	False	NA	NA	False	NA	NA	NA	53782560	53761788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
Isoform_54020_4	chr4	+	644	2	ISM	ENSMUSG00000087084.2	ENSMUST00000126252.2	1720	3	-158	3089	-158	-3089	5prime_fragment	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTTTTTTTGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	140107782	140109796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_140108031_140109400
Isoform_54021_3	chr4	+	977	2	NIC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	-160	-775	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGGTCTTGTCCCTAG	NA	False	NA	NA	False	AATACA	-14	NA	140107780	140112110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140108031_140111383
Isoform_54023_10	chr4	+	1973	14	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	10	-1753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1245.16854684784	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTAAGTTGTATTTC	2391	False	NA	10	True	NA	NA	NA	140428793	140448778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140428962_140429457_140429523_140429553_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_54027_4	chr4	+	3507	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	757	-1	757	1	3prime_fragment	FALSE	canonical	3	3313	junction_1	471.181177976518	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTTTCATGATTCCTC	3138	False	NA	29	True	AATAAA	-22	NA	140429540	140450532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_5403_3	chr11	-	1770	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	7	6422	7	2715	5prime_fragment	FALSE	canonical	3	28	junction_3	3.37045990927054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCAGCTCTGACTGTTC	NA	False	NA	NA	False	NA	NA	NA	53782479	53761789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
Isoform_5404_3	chr11	-	705	3	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	12949	1	8503	-1	3prime_fragment	FALSE	canonical	3	220	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTAGTGTCTGGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	53946891	53945754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_53946066_53946182_53946301_53946615
Isoform_54044_3	chr4	+	3637	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	27	1110	27	-1110	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGAGTACACTGCA	NA	False	NA	NA	False	NA	NA	NA	140633681	140678787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
Isoform_54045_3	chr4	+	3753	8	ISM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	26793	5	8978	-5	3prime_fragment	FALSE	canonical	3	24	junction_3	9.73527144994333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACGCGGCTCTGGGTGA	NA	False	NA	3	True	AATAAA	-28	NA	140660447	140679892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
Isoform_54049_1329	chr4	+	954	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	186	2	-12	-2	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCGTTACTCTCCATT	NA	False	NA	NA	False	AATAAA	-12	NA	140688699	140706502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
Isoform_54052_63	chr4	+	1055	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	85	2	85	-2	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCGTTACTCTCCATT	NA	False	NA	NA	False	AATAAA	-12	NA	140688598	140706502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
Isoform_54056_51	chr4	+	3909	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	48	-1	21	1	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGCACTGGTCTTGTC	1450	False	NA	13	True	AATAAA	-18	NA	140714231	140734642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
Isoform_54057_50	chr4	+	3852	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	30	0	3	0	multi-exon	FALSE	canonical	3	40	junction_19	21.6883068279021	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1432	False	NA	12	True	AATAAA	-17	NA	140714213	140734641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
Isoform_54058_6	chr4	+	4123	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	8	0	intron_retention	FALSE	canonical	3	40	junction_19	18.4710502737861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1410	False	NA	12	True	AATAAA	-17	NA	140714191	140734641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
Isoform_54059_11	chr4	+	3925	29	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	25.3341696738067	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1430	False	NA	12	True	AATAAA	-17	NA	140714211	140734641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
Isoform_5406_139	chr11	-	1175	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	4	3	4	-3	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTAGCTAGTGTCTGGCC	NA	False	NA	-5	True	AATAAA	-19	NA	53959836	53945756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
Isoform_54060_4	chr4	+	3830	29	NNC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	27.5084402632044	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1450	False	NA	11	True	AATAAA	-16	NA	140714231	140734640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
Isoform_54061_6	chr4	+	2163	6	FSM	ENSMUSG00000073733.5	ENSMUST00000097813.3	985	6	-2	-1176	-2	1176	multi-exon	FALSE	canonical	2	5	junction_2	1.26491106406735	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140941264	140948635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_140941375_140941633_140941784_140944562_140944716_140945415_140945541_140945848_140945986_140947147
Isoform_54062_15	chr4	+	3314	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-74	-366	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACCACCGACTGGGGG	374	False	NA	21	True	ATTAAA	-32	NA	140966886	140984509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_54064_9	chr4	+	3701	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	54	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTAGCATCTGCT	351	False	NA	12	True	TTTAAA	-16	NA	140966863	140984873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_54065_3	chr4	+	3149	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-73	-381	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTTGCCAAGAAAGCA	375	False	NA	6	True	ATTAAA	-17	NA	140966887	140984494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_54066_3	chr4	+	1700	5	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	8075	-352	4018	352	3prime_fragment	FALSE	canonical	3	59	junction_1	6.67083203206317	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGATATTTTTTTTTC	852	False	NA	NA	False	NA	NA	NA	140978254	140985227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
Isoform_54067_5	chr4	+	3958	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	-51	6	-51	-6	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATTTTGGCTTTCATT	NA	False	NA	2	True	AATAAA	-16	NA	141028499	141056689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_54068_23	chr4	+	1910	7	ISM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	20483	2	4810	-2	3prime_fragment	FALSE	canonical	3	123	junction_1	11.6726175299288	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGCTTTCATTCCTG	NA	False	NA	6	True	AATAAA	-20	NA	141049033	141056693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
Isoform_5407_70	chr11	-	3071	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-4	2	-4	-2	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTTGTTTGGATTTTT	NA	False	NA	-14	True	AATAAA	-11	NA	54678505	54608283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
Isoform_54070_36	chr4	+	1520	7	FSM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	-88	1	-88	-1	multi-exon	FALSE	canonical	3	37	junction_5	7.90393713425292	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTTGACCTGGTCTT	7098	False	NA	12	True	ATTAAA	-18	NA	141095442	141111485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141095636_141106988_141107105_141107629_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
Isoform_54072_24	chr4	+	2773	15	ISM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	30	-2	0	2	intron_retention	FALSE	canonical	3	129	junction_3	18.407102666401	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTGGTCCCTGTGTC	NA	False	NA	7	True	AATAAA	-17	NA	141171994	141194538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
Isoform_54074_680	chr4	+	2694	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	30	-2	0	2	multi-exon	FALSE	canonical	3	129	junction_3	19.5436832648187	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTGGTCCCTGTGTC	NA	False	NA	7	True	AATAAA	-17	NA	141171994	141194538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_54075_22	chr4	+	2765	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	-39	-4	-39	4	multi-exon	TRUE	canonical	3	129	junction_3	19.5436832648187	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171925	141194540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_54080_30	chr4	+	2766	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	44.2053792603972	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTGTGGTCCCTGT	NA	False	NA	4	True	AATAAA	-14	NA	141171994	141194535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190908_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_54081_13	chr4	+	2878	17	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	55.9686016888041	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTCCCTGTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	141171995	141194539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_141172114_141174561_141174649_141175353_141175538_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
Isoform_54083_61	chr4	+	2045	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	224	1628	-8	661	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGCCTGTATTGTCCC	NA	False	NA	9	True	AATAAA	-19	NA	141521146	141541659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_54084_24	chr4	+	2164	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	103	1630	5	659	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTAGCCTGTATTGTC	NA	False	NA	7	True	AATAAA	-17	NA	141521025	141541657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_54085_9	chr4	+	3671	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	60.6357267460751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141521113	141543287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905_141542148_141542182
Isoform_54088_7	chr4	+	3789	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	106	2	8	-2	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141521028	141543285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_5409_3	chr11	-	819	3	FSM	ENSMUSG00000052298.13	ENSMUST00000136059.8	801	3	-11	-7	-6	7	multi-exon	FALSE	canonical	3	549	junction_1	84	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	54678478	54630804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54631377_54647231_54647386_54678385
Isoform_54090_6	chr4	+	2150	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	20	663	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTGTATTGTCCCTA	NA	False	NA	11	True	AATAAA	-21	NA	141521040	141541661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_54091_21	chr4	+	2039	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-8	658	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTAGCCTGTATTGT	NA	False	NA	6	True	AATAAA	-16	NA	141521146	141541656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_54092_6	chr4	+	3652	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	74.1451695853446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141521129	141543287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905_141542148_141542182
Isoform_54094_3	chr4	+	2212	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-50	648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.5389492289435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATAGGACTGTATTTAG	NA	False	NA	-4	True	AATAAA	-6	NA	141521104	141541646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_141521298_141521680_141521819_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
Isoform_54095_3	chr4	+	631	2	FSM	ENSMUSG00000085761.2	ENSMUST00000126231.2	630	2	4	-5	4	5	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAAAGTTCTGTTACA	NA	False	NA	NA	False	CATAAA	-17	NA	141745212	141756312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_141745442_141755910
Isoform_54096_3	chr4	+	2230	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	66	28	66	-28	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGCTTAGGTTT	NA	False	NA	NA	False	AATAGA	-45	NA	143076392	143097574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143077382_143096333
Isoform_54097_3	chr4	+	2155	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	55	114	55	-114	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTCATGTCTGTGACT	NA	False	NA	NA	False	NA	NA	NA	143076381	143097488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143077382_143096333
Isoform_54098_37	chr4	+	3360	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	525	1	-21	-1	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139520	143147660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
Isoform_5410_11	chr11	-	670	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	315	2446	-9	287	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTAAGTTGGTAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	54751423	54731630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
Isoform_54103_7	chr4	+	3560	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	325	1	-221	-1	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139320	143147660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
Isoform_54104_75	chr4	+	3265	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-6	1	-6	-1	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139550	143147660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
Isoform_54106_32	chr4	+	3313	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-56	3	-41	-3	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGTTTCACTTCCT	NA	False	NA	7	True	AATAAA	-14	NA	143139500	143147658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
Isoform_54107_8	chr4	+	3522	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-263	1	-248	-1	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTTCACTTCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	143139293	143147660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
Isoform_54109_5	chr4	+	2499	3	FSM	ENSMUSG00000078508.2	ENSMUST00000105751.2	1745	3	29	-783	29	783	multi-exon	FALSE	canonical	3	38	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTGAGTATTTTTTTT	NA	False	NA	NA	False	AATGAA	-12	NA	144056847	144060818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_144057106_144057681_144058255_144059150
Isoform_5411_9	chr11	-	1657	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	316	1458	-8	-4	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACAGAGAAGTGATTTC	NA	False	NA	-6	True	AATAAA	-23	NA	54751422	54730642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
Isoform_54110_6	chr4	+	2119	4	FSM	ENSMUSG00000070619.6	ENSMUST00000094526.5	2094	4	-17	-8	-17	8	multi-exon	TRUE	canonical	1	3	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTGTTATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	144084494	144090997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_144084551_144088178_144088493_144088970_144089562_144089839
Isoform_54111_3	chr4	+	1726	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	46	565	-8	-1	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCGTTCACGTGTTTG	5992	False	NA	11	True	AATAAA	-18	NA	144619692	144654214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
Isoform_54113_4	chr4	+	2984	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	7	5	7	-5	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTGCTTTGATTGTTT	901	False	NA	NA	False	NA	NA	NA	145237335	145265753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
Isoform_54114_4	chr4	-	2646	7	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	17	63265	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.367600672181	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGCCTATTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	146994030	146912887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_-_146913141_146913224_146913958_146914042_146914368_146976159_146977116_146978205_146978333_146982168_146982273_146993882
Isoform_54119_6	chr4	+	972	2	Fusion	ENSMUSG00000078503.10_ENSMUSG00000082352.2	novel	3044	5	NA	NA	-21	87	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAGCTGTGTAAGATT	4998	False	NA	13	True	AAGAAA	-9	NA	145241432	145301818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr4_+_145241589_145301002
Isoform_54122_11	chr4	+	238	3	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	13	164156	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	76.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145311785	145516071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_145311905_145510590_145510684_145516045
Isoform_54123_3	chr4	+	3978	8	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	3	1188	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	74.0085488718867	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCCGCTACGGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	147216497	147266224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_147216647_147219028_147219122_147224494_147224577_147249797_147249844_147260303_147260362_147261203_147261331_147262781_147264991_147265010
Isoform_54124_4	chr4	+	714	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-16	38382	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146206925	146253386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
Isoform_54125_16	chr4	+	671	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2413	3	NA	NA	13	-2028	multi-exon	FALSE	canonical	2	3	junction_4	97.8885080078351	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	145311785	145554484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
Isoform_54126_3	chr4	+	235	3	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	13	164156	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	12.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145311785	145516071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_145311905_145510590_145510684_145516048
Isoform_54128_3	chr4	+	260	2	FSM	ENSMUSG00000066009.9	ENSMUST00000154939.2	266	2	1	5	1	-5	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATACAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	146033868	146035162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146034017_146035050
Isoform_54129_30	chr4	+	2845	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-46	-1	1	1	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	146033868	146063192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
Isoform_54131_6	chr4	+	2717	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	146033869	146063192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_146034017_146054375_146054480_146060726
Isoform_54132_3	chr4	+	811	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	-47	3480	-47	100	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAACACAACAGAA	NA	False	NA	NA	False	TTTAAA	-43	NA	146093346	146131839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
Isoform_54133_3	chr4	+	757	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	3	3484	3	96	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAGAAGAAAGAACACAAC	NA	False	NA	NA	False	TTTAAA	-39	NA	146093396	146131835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
Isoform_54136_22	chr4	+	258	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	29	-38430	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	137	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146695446	146703634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146695586_146697966_146698060_146703608
Isoform_54137_6	chr4	+	301	3	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_2	92.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	145508025	145516069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_145508210_145510590_145510684_145516045
Isoform_54139_6	chr4	+	645	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	12	38382	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146206912	146253386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
Isoform_54141_4	chr4	+	836	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.482428469283	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146586602_146616526_146616611_146619877_146620005_146626770
Isoform_54142_3	chr4	+	258	2	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-28	-34175	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	146586455	146587302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146586602_146587190
Isoform_54144_7	chr4	+	766	5	FSM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	9	3231	9	-1430	multi-exon	FALSE	canonical	3	18	junction_2	173.168992605489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAACACAACAGAAAT	NA	False	NA	NA	False	TTTAAA	-45	NA	145397263	145427780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
Isoform_54149_4	chr4	+	808	5	FSM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	7	3178	7	-3178	multi-exon	FALSE	canonical	1	1	junction_2	279.904894562421	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAATAGTGAAATGAACA	2290	False	NA	NA	False	AATAAA	-30	NA	147106313	147142073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_147106458_147107818_147107913_147136962_147137048_147140055_147140183_147141715
Isoform_54154_3	chr4	+	808	5	NNC	ENSMUSG00000078497.10	novel	1250	5	NA	NA	-48	214	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	221.659085083378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAACACAACAGAA	2321	False	NA	48	True	TTTAAA	-43	NA	147445711	147474960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_147445910_147447267_147447362_147469673_147469759_147472778_147472906_147474656
Isoform_54155_4	chr4	+	2696	4	FSM	ENSMUSG00000065999.14	ENSMUST00000139784.8	628	4	-2	-2066	-2	-6	multi-exon	FALSE	canonical	3	55	junction_1	19.7540431867054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAAGTTTGCTTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	147637731	147669649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290
Isoform_54158_719	chr4	+	2731	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	12.5	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025351	148031771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148026515_148029064_148029919_148031057
Isoform_54159_84	chr4	+	2761	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-30	0	-30	0	multi-exon	FALSE	canonical	3	503	junction_1	12.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025321	148031771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148026515_148029064_148029919_148031057
Isoform_54162_4	chr4	+	663	3	FSM	ENSMUSG00000029019.9	ENSMUST00000103231.5	781	3	112	6	112	-6	multi-exon	FALSE	canonical	3	7	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATTTGTGTCCGTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	148070356	148071656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148070559_148070752_148070976_148071418
Isoform_54163_9	chr4	+	2655	12	FSM	ENSMUSG00000029009.18	ENSMUST00000097788.11	2652	12	-3	0	-3	0	multi-exon	FALSE	canonical	3	10	junction_1	31.6729151439997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123530	148140663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_54164_4	chr4	+	3435	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10	junction_1	31.903134642226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123530	148140663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_148123590_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_54165_5	chr4	+	3464	3	ISM	ENSMUSG00000029009.18	ENSMUST00000141283.8	847	4	-16	-1821	-16	1821	intron_retention	FALSE	canonical	3	54	junction_1	27	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148123599	148130832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_148123867_148126040_148126287_148127881
Isoform_54167_32	chr4	+	2891	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	3	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	21.8151513046846	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGGCTTGCTCTTGGCC	NA	False	NA	21	True	AAGAAA	-35	NA	148123574	148140666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_54169_4	chr4	+	6225	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-36	0	intron_retention	FALSE	canonical	3	54	junction_1	21.8151513046846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTGTTTTTAAATGC	NA	False	NA	14	True	ATTAAA	-18	NA	148123579	148144005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
Isoform_54170_11	chr4	+	1467	10	NIC	ENSMUSG00000029003.12	novel	1162	10	NA	NA	-115	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	273.044562907474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148215256	148230154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_148215424_148224299_148224478_148225049_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_54171_27	chr4	+	1253	10	FSM	ENSMUSG00000029003.12	ENSMUST00000084129.9	1162	10	-95	4	-95	-1	multi-exon	FALSE	canonical	3	16	junction_1	269.730638385688	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGGATGAACATGTGT	NA	False	NA	26	True	AATAAA	-34	NA	148215276	148230152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148215424_148224299_148224478_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_54175_247	chr4	+	1167	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	352	16	-190	-13	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCATTAACCAAACAGG	NA	False	NA	14	True	AATAAA	-22	NA	148224990	148230140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_54177_545	chr4	+	1004	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	529	2	-13	1	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148225167	148230154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
Isoform_54179_50	chr4	+	962	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-26	13	-7	-13	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCATTAACCAAACAGG	NA	False	NA	14	True	AATAAA	-22	NA	148225173	148230140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
Isoform_54180_15	chr4	+	1196	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-246	-1	-227	1	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148224953	148230154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
Isoform_54185_68	chr4	+	1279	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	1	8	1	-8	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGACGCACAGATGAA	NA	False	NA	15	True	NA	NA	NA	148245078	148250873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
Isoform_54187_7	chr4	+	1330	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	-50	8	-50	-8	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGACGCACAGATGAA	NA	False	NA	15	True	NA	NA	NA	148245027	148250873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
Isoform_54188_55	chr4	+	1034	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	-32	1	-18	-1	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGGCCTCTGACTATG	NA	False	NA	15	True	AATAAA	-21	NA	148533049	148539429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
Isoform_5419_296	chr11	-	2736	18	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3603	False	NA	-6	True	CATAAA	-17	NA	54846927	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
Isoform_54195_9	chr4	+	2750	19	ISM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	26	5584	2	193	5prime_fragment	TRUE	canonical	3	466	junction_4	45.4584670025532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAACATTTGTATATG	NA	False	NA	7	True	AATAAA	-17	NA	148642913	148661263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
Isoform_54198_747	chr4	+	2755	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	30	5	-3	3	multi-exon	FALSE	canonical	3	466	junction_4	49.4747234847138	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	148642915	148666853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
Isoform_54199_10	chr4	+	2748	25	FSM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	29	-4	-2	1	multi-exon	FALSE	canonical	2	11	junction_23	124.10724948608	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGATGGTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	148642916	148666851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666218_148666292_148666740
Isoform_542_540	SIRV7	-	427	3	FSM	SIRV7A	SIRV704	428	3	1	0	1	0	multi-exon	FALSE	canonical	3	4944	junction_1	1233	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114737	55849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV7_-_56098_78841_78964_114680
Isoform_54200_25	chr4	+	2679	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-2	5	-2	3	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	148642916	148666853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
Isoform_54202_9	chr4	+	2200	20	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	4493	7	-153	1	3prime_fragment	FALSE	canonical	3	495	junction_14	47.5464490781867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGATGGTTCTTGGT	4086	False	NA	NA	False	ATTAAA	-15	NA	148647378	148666851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
Isoform_54203_36	chr4	+	1385	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	14	20	14	-20	intron_retention	FALSE	canonical	3	3092	junction_5	102.267101259398	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTCATGACCTCTGA	8730	False	NA	8	True	AATACA	-16	NA	148675973	148679056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
Isoform_54204_1453	chr4	+	1315	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	9	14	9	-14	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGACCTCTGACCTTTT	8725	False	NA	14	True	AATACA	-22	NA	148675968	148679062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
Isoform_54211_5	chr4	+	726	5	FSM	ENSMUSG00000028979.18	ENSMUST00000105701.9	738	5	14	-2	0	2	multi-exon	FALSE	canonical	2	14	junction_1	7.49583217528247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148687024	148688876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148688712
Isoform_54212_4	chr4	+	2620	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141432	1652	-1141	666	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAAGTTGTACAGTA	NA	False	NA	NA	False	NA	NA	NA	149030317	149037694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
Isoform_54213_4	chr4	+	2674	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141446	1584	-1127	734	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACGGAAAAAAACAAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	149030331	149037762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
Isoform_54216_30	chr4	+	1787	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	36	12	36	-12	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCGAAAAAACCAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	149188638	149203315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
Isoform_54218_30	chr4	+	2425	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	36	-4	36	4	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTTTGTTTGTCAGAA	NA	False	NA	10	True	AATAAA	-20	NA	149188638	149205108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
Isoform_5422_23	chr11	-	2734	18	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	69.342188459451	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6846	False	NA	-6	True	CATAAA	-17	NA	54853737	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
Isoform_54220_31	chr4	+	1283	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCTATGAAAATT	NA	False	NA	25	True	NA	NA	NA	149569698	149581123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_54221_9	chr4	+	1296	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	61.9861735735133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTGGTGTCTATGAAAA	NA	False	NA	23	True	NA	NA	NA	149569679	149581121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_149569731_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_54223_15	chr4	+	1574	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	27	-5	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGGTGTCTATGAAA	NA	False	NA	22	True	NA	NA	NA	149569723	149581120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_54224_46	chr4	+	1833	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-18	2	-18	-2	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCTATGAAAATT	NA	False	NA	25	True	NA	NA	NA	149569732	149581123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
Isoform_54228_8	chr4	+	2754	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-81	1	-81	-1	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGAGCTGAGCTGG	NA	False	NA	8	True	AATAAA	-15	NA	149602611	149650893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
Isoform_5423_13	chr11	-	2693	17	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	70.9101268772663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3647	False	NA	-6	True	CATAAA	-17	NA	54846883	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846673
Isoform_54234_17	chr4	+	4406	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	53	0	53	0	multi-exon	FALSE	canonical	3	455	junction_9	51.7981175594149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670977	149733356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
Isoform_54236_3	chr4	+	3332	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	59	159	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTAGTAGTCCAGGAC	NA	False	NA	29	True	AATAAA	-20	NA	149671153	149732515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
Isoform_54239_5	chr4	+	3927	17	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_16	65.6780737765656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	8831	False	NA	24	True	AATAAA	-19	NA	149711745	149733356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149733144_149733170
Isoform_5424_210	chr11	-	2579	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTTTGTGACTGGCTA	3586	False	NA	-8	True	CATAAA	-15	NA	54846944	54801615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
Isoform_54240_5	chr4	+	3600	15	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	4597	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_14	67.7690029076867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149716183	149733356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149733144_149733170
Isoform_5425_34	chr11	-	2570	17	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	68.3266225109218	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6838	False	NA	-6	True	CATAAA	-17	NA	54853745	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_54250_7	chr4	+	2515	8	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	16448	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_7	86.1633474801182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGAGTGGGGTCCATT	NA	False	NA	22	True	AATAAA	-17	NA	149728034	149733354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149733144_149733170
Isoform_54255_4	chr4	+	3018	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	240	1642	240	-1642	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGAAATGATGTTGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	150172061	150188742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
Isoform_54256_4	chr4	+	1470	6	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	9366	-506	510	506	3prime_fragment	FALSE	canonical	3	15	junction_5	2.57681974534502	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAACGAACAAAC	1872	False	NA	NA	False	NA	NA	NA	150242794	150253445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
Isoform_54258_389	chr4	+	1752	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	272	3	-16	3	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGGGCATCTCATTT	NA	False	NA	2	True	AATAAA	-19	NA	150321680	150333333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_54259_10	chr4	+	1821	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	288	-82	0	82	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTCAGGTTTCCGTG	NA	False	NA	87	True	NA	NA	NA	150321696	150333418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_5426_15	chr11	-	2736	17	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-168	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	68.3266225109218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6672	False	NA	-6	True	CATAAA	-17	NA	54853911	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_54260_8	chr4	+	1993	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	28	6	28	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321436	150333330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_54264_5	chr4	+	4537	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	2891	junction_7	4050.42165157599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321697	150333330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_150321798_150323929_150324024_150325501_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
Isoform_54268_8	chr4	+	2661	17	ISM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-88	7730	-88	2167	5prime_fragment	FALSE	canonical	3	64	junction_3	21.242645786248	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAAAGACCCAGGTG	NA	False	NA	NA	False	NA	NA	NA	150366014	150698693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596
Isoform_54269_160	chr4	+	3042	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	0	1	0	-1	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTGTCTTGTCTAA	3781	False	NA	NA	False	AATAAA	-27	NA	150939529	150953343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
Isoform_54274_1499	chr4	+	2192	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	46	913	-2	2	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTTGGAAACTAGTCT	9116	False	NA	30	True	TATAAA	-22	NA	152018193	152065681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_54275_462	chr4	+	2923	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	46	182	-2	-182	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9116	False	NA	18	True	NA	NA	NA	152018193	152066412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_54276_189	chr4	+	2249	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	-14	916	-14	-1	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGGTTTGGAAACTAG	9056	False	NA	27	True	TATAAA	-19	NA	152018133	152065678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_54277_45	chr4	+	2969	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	0	182	0	-182	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9070	False	NA	18	True	NA	NA	NA	152018147	152066412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
Isoform_54286_3	chr4	+	3780	6	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.3435487671041	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6508	False	NA	13	True	AATAAA	-13	NA	152093369	152102137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101291_152101364_152101489_152101510
Isoform_54289_447	chr4	+	3713	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	10	-1	1	1	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATAATAACAAAGAT	7355	False	NA	NA	False	NA	NA	NA	152123793	152144482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
Isoform_54290_8	chr4	+	5181	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	13	-1472	4	2	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTCCTAGCCGTCTCTCA	7358	False	NA	NA	False	AATAAA	-19	NA	152123796	152145953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
Isoform_54292_9	chr4	+	2270	12	FSM	ENSMUSG00000028948.17	ENSMUST00000103197.5	2271	12	1	0	1	0	multi-exon	FALSE	canonical	2	5	junction_11	194.972004771526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTTCCTAGCCGTCTCT	7355	False	NA	NA	False	AATAAA	-17	NA	152123793	152145951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152145709
Isoform_54293_8	chr4	+	3618	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	-25	23	2	-5	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7356	False	NA	NA	False	NA	NA	NA	152123794	152144476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
Isoform_54294_4	chr4	+	2784	17	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-11	5875	-11	1306	5prime_fragment	FALSE	canonical	3	104	junction_1	13.9860421492286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGTACACTGACATT	NA	False	NA	NA	False	NA	NA	NA	152171303	152193972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134
Isoform_54295_13	chr4	+	4082	21	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-3	0	-3	0	intron_retention	FALSE	canonical	3	104	junction_1	15.0860863049367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171311	152199847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
Isoform_54296_253	chr4	+	3834	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-13	-3	-13	-1	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCATGCGCTTCT	NA	False	NA	31	True	TATAAA	-20	NA	152171301	152199850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_54297_6	chr4	+	3895	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-5	0	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171309	152199847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_54298_3	chr4	+	3772	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	34.9383385409209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCATGCGCTTCT	NA	False	NA	31	True	TATAAA	-20	NA	152171312	152199850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_54299_10	chr4	+	4274	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	104	junction_1	14.6574213284602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171311	152199844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_54300_333	chr4	+	1373	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	86	-2	86	-1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGGTGGTCATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	152262676	152356311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_54302_10	chr4	+	1771	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	-314	0	-314	0	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTAGGTGGTCATTT	NA	False	NA	17	True	AATAAA	-22	NA	152262276	152356309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_54303_21	chr4	+	1585	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	-83	3	-83	0	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTAGGTGGTCATTT	NA	False	NA	17	True	AATAAA	-22	NA	152270507	152356309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
Isoform_54307_8	chr4	+	4964	6	FSM	ENSMUSG00000039662.17	ENSMUST00000151372.8	4950	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	25	junction_2	50.2274825170444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTCCTGTATCA	4598	False	NA	2	True	AATAAA	-17	NA	152381746	152391577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152387478
Isoform_54308_29	chr4	+	4861	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	63	-5	-14	5	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTGTATCAGGTGTC	4598	False	NA	8	True	AATAAA	-23	NA	152381746	152391583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
Isoform_54309_11	chr4	+	4938	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	-13	-6	-13	6	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTGTATCAGGTGTCC	4522	False	NA	9	True	AATAAA	-24	NA	152381670	152391584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
Isoform_5431_116	chr11	-	2787	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	44	3	9	-1	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3626	False	NA	-6	True	CATAAA	-17	NA	54846904	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
Isoform_54313_98	chr4	+	2058	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	-6	-1	-6	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGTGCAAGGCTTTT	NA	False	NA	30	True	ATTAAA	-20	NA	152410317	152418529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_54314_1338	chr4	+	462	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	9	3	-5	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410318	152416934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_54316_48	chr4	+	504	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	-33	3	-33	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410276	152416934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_54317_27	chr4	+	596	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	-14	-1	-14	1	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410184	152416934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
Isoform_54329_12	chr4	+	1571	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	6	0	1	intron_retention	FALSE	canonical	3	743	junction_1	52	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041711	154046376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_154041780_154044205_154044320_154044987
Isoform_54330_541	chr4	+	1074	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	6	0	1	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041711	154046376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
Isoform_54332_48	chr4	+	1067	4	FSM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	-11	-116	0	1	multi-exon	FALSE	canonical	3	119	junction_1	332.870345129551	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041711	154046376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154041780_154044212_154044320_154044987_154045450_154045946
Isoform_54333_12	chr4	+	957	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	21	-1	3	1	multi-exon	FALSE	canonical	3	25	junction_1	388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTGTGTTCACAA	NA	False	NA	NA	False	AATAAA	-23	NA	154041714	154046376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154041780_154044987_154045450_154045946
Isoform_54336_4	chr4	+	2640	12	ISM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-9	18252	-9	404	5prime_fragment	FALSE	canonical	3	75	junction_10	10.7963875194935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATCTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154059641	154074937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231
Isoform_54338_6	chr4	+	2524	14	ISM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-34	15049	-34	3607	5prime_fragment	FALSE	canonical	3	75	junction_10	9.9418427208637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGGCCTTCATGGACT	NA	False	NA	NA	False	NA	NA	NA	154059616	154078140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926
Isoform_5434_16	chr11	-	2823	18	FSM	ENSMUSG00000020400.18	ENSMUST00000018482.13	2810	18	-14	1	-9	-1	multi-exon	FALSE	canonical	3	7	junction_17	76.4117873477302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	6831	False	NA	-6	True	CATAAA	-17	NA	54853752	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
Isoform_54341_38	chr4	+	3616	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	21	1514	21	-1514	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGCTATTCTAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	154059671	154091675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_54342_6	chr4	+	3681	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-45	1515	-45	-1515	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAGCTATTCTAAGA	NA	False	NA	NA	False	AATAAA	-12	NA	154059605	154091674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_54343_9	chr4	+	5129	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	19	3	19	-3	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCATGTCACTTTTA	NA	False	NA	10	True	AGTAAA	-7	NA	154059669	154093186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_54344_3	chr4	+	5231	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-80	0	-80	0	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTCACTTTTATTA	NA	False	NA	13	True	AGTAAA	-10	NA	154059570	154093189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_54345_3	chr4	+	4774	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-62	439	-62	-439	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATCCTTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	154059588	154092750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
Isoform_54347_28	chr4	+	3349	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096260	154105970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
Isoform_54348_3	chr4	+	2854	8	NIC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	148.085744604611	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096250	154105970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104343_154104893
Isoform_54349_14	chr4	+	2886	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	147.745644640389	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096236	154105970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104343_154104875
Isoform_54350_3	chr4	+	3159	9	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	5	7	5	-7	intron_retention	FALSE	canonical	3	51	junction_4	7.24568837309472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCATTGAACAGTGGTG	NA	False	NA	18	True	TATAAA	-23	NA	154226833	154241266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991
Isoform_54351_5	chr4	+	1801	11	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	37	-1	0	1	intron_retention	FALSE	canonical	3	51	junction_4	7.11407056473296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTGGTGGTTGTTTT	NA	False	NA	26	True	TATAAA	-31	NA	154226865	154241274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557
Isoform_54352_72	chr4	+	1562	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	37	-1	0	1	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTGGTGGTTGTTTT	NA	False	NA	26	True	TATAAA	-31	NA	154226865	154241274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
Isoform_54353_6	chr4	+	2366	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	-8	-1971	-8	1971	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTCCTGTGTGTCTC	2918	False	NA	NA	False	NA	NA	NA	154685645	154690630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154685865_154688483
Isoform_54354_9	chr4	+	2254	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	104	-1971	-14	1971	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTCCTGTGTGTCTC	3030	False	NA	NA	False	NA	NA	NA	154685757	154690630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_154685865_154688483
Isoform_54355_7	chr4	+	2558	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	14	-64	4	1	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155048593	155065392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
Isoform_54356_27	chr4	+	1555	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	43	90	0	-90	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	155151515	155156800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
Isoform_54358_5	chr4	+	1645	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	9	5	-3	-5	multi-exon	TRUE	canonical	3	16	junction_9	6.41927570616156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTAGCACCTTTT	NA	False	NA	12	True	AATAAA	-13	NA	155171042	155229957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
Isoform_54359_3	chr4	+	1525	13	NIC	ENSMUSG00000029049.15	novel	1659	14	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	9.1874763794103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCAACCCTGAGTAGCA	NA	False	NA	6	True	AATAAA	-7	NA	155171045	155229951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155171139_155171877_155171950_155173942_155174042_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
Isoform_5436_94	chr11	-	2636	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTGACTGGCTAAT	3605	False	NA	-6	True	CATAAA	-17	NA	54846925	54801613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
Isoform_54360_66	chr4	+	1050	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	23	3	0	0	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334445	155341141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
Isoform_54362_4	chr4	+	1010	4	FSM	ENSMUSG00000073684.14	ENSMUST00000105627.8	710	4	1	-301	1	0	multi-exon	FALSE	canonical	2	17	junction_1	91.7617688485909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334446	155341141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155334520_155335001_155335108_155335212_155335494_155340591
Isoform_54363_14	chr4	+	1374	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	103	2	103	-1	multi-exon	FALSE	canonical	3	207	junction_2	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATTTTGTTTCCTTCAT	NA	False	NA	3	True	NA	NA	NA	155334562	155341139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155335108_155335212_155335494_155340591
Isoform_54365_10	chr4	+	2391	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	-26	0	-26	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGCGT	2306	False	NA	NA	False	NA	NA	NA	155493688	155506449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
Isoform_54368_46	chr4	+	3141	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	2	0	-1	0	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575819	155643726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
Isoform_54373_230	chr4	+	3093	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	36	2	36	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	25	True	AATAAA	-17	NA	155575862	155643724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
Isoform_54376_205	chr4	+	1685	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-7	1453	-1	163	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	NA	False	NA	8	True	AATAAA	-18	NA	155575819	155642273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
Isoform_5438_15	chr11	-	2650	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	-10	2	-9	0	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	6831	False	NA	-7	True	CATAAA	-16	NA	54853752	54801614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
Isoform_54382_61	chr4	+	3091	11	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_10	1033.79389145032	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575820	155643726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
Isoform_54387_193	chr4	+	3091	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-3	0	0	0	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575817	155643726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
Isoform_54400_10	chr4	+	3630	11	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	146	11	4	-7	intron_retention	FALSE	canonical	3	675	junction_7	31.7464958696232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9718	False	NA	27	True	AATAAA	-13	NA	155648302	155675447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066
Isoform_54401_611	chr4	+	3023	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	118	11	-8	-7	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9690	False	NA	27	True	AATAAA	-13	NA	155648274	155675447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
Isoform_54406_29	chr4	+	2862	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9693	False	NA	27	True	AATAAA	-13	NA	155648277	155675447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
Isoform_54409_22	chr4	+	2818	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-8	-7	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGAGTTAAGTAA	9690	False	NA	27	True	AATAAA	-13	NA	155648274	155675447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
Isoform_54416_4	chr4	+	650	7	NIC	ENSMUSG00000029062.15	novel	805	7	NA	NA	-6	3765	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	146.382679606875	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGGAAGAGGGAGCGG	3956	False	NA	NA	False	NA	NA	NA	155709319	155718562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545
Isoform_5442_491	chr11	-	2494	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	-7	2	-7	-2	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGATGTGTGTGCTT	NA	False	NA	-6	True	NA	NA	NA	54924278	54869935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
Isoform_54421_4	chr4	+	607	6	ISM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	-6	15829	-6	3769	5prime_fragment	FALSE	canonical	3	247	junction_2	78.77715404862	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGAGGGAGCGGGAGC	3956	False	NA	NA	False	NA	NA	NA	155709319	155718566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545
Isoform_54423_16	chr4	+	1001	9	ISM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	23	10074	9	41	5prime_fragment	FALSE	canonical	3	247	junction_2	65.3567135036639	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGGAAGAAGAAGAGG	3985	False	NA	26	True	NA	NA	NA	155709348	155724321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233
Isoform_54425_3	chr4	+	936	7	ISM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	-18	11296	9	-1181	5prime_fragment	FALSE	canonical	3	183	junction_2	93.7859560678226	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCAGACAAGCATGG	3985	False	NA	NA	False	NA	NA	NA	155709348	155723099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976
Isoform_54428_13	chr4	+	887	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-19	6	-8	-6	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGTTGACCAAATGCT	NA	False	NA	NA	False	AGTAAA	-20	NA	155789572	155816640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
Isoform_54430_44	chr4	+	833	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-23	64	-12	-64	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACATCCTGGTCAA	NA	False	NA	NA	False	AATAAA	-24	NA	155789568	155816582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
Isoform_54435_704	chr4	+	1082	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	295	95	-29	-95	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAAGTGTCTGTTGTTGG	NA	False	NA	22	True	AATAAA	-22	NA	155789551	155818241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
Isoform_54437_37	chr4	+	1125	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	252	95	-72	-95	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAAGTGTCTGTTGTTGG	NA	False	NA	22	True	AATAAA	-22	NA	155789508	155818241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
Isoform_54440_37	chr4	+	1143	5	NIC	ENSMUSG00000029066.13	novel	810	5	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	558.135064298956	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGAGTTATTTCCTGG	NA	False	NA	21	True	AATAAA	-17	NA	155887320	155893287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155887553_155887829_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_54441_599	chr4	+	660	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	100	4	-26	-4	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGTGAGTTATTTCC	NA	False	NA	18	True	AATAAA	-14	NA	155888077	155893284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_54444_15	chr4	+	1306	4	FSM	ENSMUSG00000029068.17	ENSMUST00000136370.2	833	4	-275	-198	2	198	multi-exon	FALSE	canonical	3	885	junction_3	91.4123745573991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGATAAAAACA	4639	False	NA	NA	False	NA	NA	NA	155896959	155900513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699
Isoform_54445_16	chr4	+	982	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	2	5701	2	2984	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTGTTTTAAAAAAAAT	4639	False	NA	16	True	AATAAA	-16	NA	155896959	155903299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
Isoform_54450_8	chr4	+	4027	11	FSM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	6	187	6	53	multi-exon	FALSE	canonical	3	294	junction_8	224.905068862398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGGGCTGTCATT	4643	False	NA	21	True	AATAAA	-26	NA	155896963	155908813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
Isoform_54451_47	chr4	+	2241	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	14	187	2	53	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGGGCTGTCATT	4639	False	NA	21	True	AATAAA	-26	NA	155896959	155908813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
Isoform_54455_55	chr4	+	862	4	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	6	6	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCGACCTAGAGTTTCT	NA	False	NA	33	True	AATAAA	-23	NA	155916131	155917524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
Isoform_54456_484	chr4	+	757	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	324	78	6	-9	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916131	155917509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_54457_169	chr4	+	815	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	285	59	17	10	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACCTAGAGTTTCTTTGG	NA	False	NA	37	True	AATAAA	-27	NA	155916092	155917528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_54458_14	chr4	+	862	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	219	78	-49	-9	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916026	155917509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
Isoform_54459_32	chr4	+	878	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	1112.8534894086	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916131	155917509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155916224_155916349_155916528_155916808_155917255_155917347
Isoform_54460_84	chr4	+	809	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	6	-42	6	12	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAGAGTTTCTTTGGCT	NA	False	NA	39	True	AATAAA	-29	NA	155916131	155917530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
Isoform_54461_19	chr4	+	902	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	-79	-50	-29	20	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGGCTTGGTGTGA	NA	False	NA	47	True	AATAAA	-37	NA	155916046	155917538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
Isoform_54462_19	chr4	+	1003	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	17	9	7	-9	multi-exon	FALSE	canonical	3	2371	junction_1	52	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916132	155917509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155916528_155916808_155917255_155917347
Isoform_54464_20	chr4	+	1766	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1673	-6	-905	6	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	18	True	AATAAA	-19	NA	155925855	155928551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
Isoform_54466_1333	chr4	+	2115	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	19	234	-2	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9979	False	NA	32	True	AATAAA	-20	NA	155954021	155973326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
Isoform_54467_112	chr4	+	2350	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	19	-1	-2	1	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACTGTGTACCGTCAT	9979	False	NA	22	True	AATAAA	-22	NA	155954021	155973561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
Isoform_54474_34	chr4	+	3925	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	441	-1	-9	0	multi-exon	FALSE	canonical	3	47	junction_10	11.8275254879557	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976719	155991708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
Isoform_54476_3	chr4	+	3910	23	FSM	ENSMUSG00000029033.17	ENSMUST00000079031.6	4301	23	388	3	-9	-2	multi-exon	TRUE	canonical	1	2	junction_9	17.5901456259036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGCTGCCTGCTCATTG	NA	False	NA	8	True	AATAAA	-13	NA	155976719	155991705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
Isoform_54477_88	chr4	+	1448	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-13	-1	-5	1	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	782	False	NA	35	True	TATAAA	-17	NA	156028312	156042169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_54478_10	chr4	+	1422	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-50	62	-12	-62	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTTCATTTT	745	False	NA	-28	True	AGTAAA	-20	NA	156028275	156042106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_54479_157	chr4	+	1285	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	25	-1	-5	1	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	782	False	NA	35	True	TATAAA	-17	NA	156028312	156042169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_5448_265	chr11	-	2469	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	-2	4	-2	-4	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGAGTGATGTGTGTGC	NA	False	NA	-8	True	NA	NA	NA	54924273	54869937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
Isoform_54481_111	chr4	+	1585	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	6	1892	-5	1	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	782	False	NA	35	True	TATAAA	-17	NA	156028312	156042169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_54483_150	chr4	+	1422	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	25	1892	-5	1	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	782	False	NA	35	True	TATAAA	-17	NA	156028312	156042169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
Isoform_54486_3	chr4	+	1670	6	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	10	3	10	-3	intron_retention	FALSE	canonical	3	21	junction_4	2.72763633939717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTGCACTCTGCT	NA	False	NA	7	True	AATAAA	-21	NA	156046784	156051083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322
Isoform_54487_32	chr4	+	1307	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	7	1	7	-1	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGCACTCTGCTTA	NA	False	NA	9	True	AATAAA	-23	NA	156046781	156051085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
Isoform_54489_12	chr4	+	1645	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	22	3	-17	-3	multi-exon	FALSE	canonical	3	37	junction_1	241.738769445576	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTCCTCTCCAGCAT	NA	False	NA	25	True	ATTAAA	-16	NA	156077350	156094664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_54491_419	chr4	+	1518	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	257	3402	-2	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077624	156094665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_54493_79	chr4	+	1696	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	79	3402	79	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077446	156094665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_54495_39	chr4	+	1792	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	-17	3402	-17	-2	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077350	156094665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_54500_8	chr4	+	1535	7	FSM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	9	110	9	-2	multi-exon	FALSE	canonical	3	13	junction_1	268.571995313485	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077842	156094665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156078027_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
Isoform_54503_13	chr4	+	2527	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	1	0	1	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8256	False	NA	22	True	NA	NA	NA	156194439	156211722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_54504_11	chr4	+	2610	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8260	False	NA	19	True	NA	NA	NA	156194443	156211719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_54505_15	chr4	+	2846	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8258	False	NA	21	True	NA	NA	NA	156194441	156211721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_54506_5	chr4	+	2419	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8265	False	NA	19	True	NA	NA	NA	156194448	156211719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_54507_18	chr4	+	2627	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	32	1	0	-1	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8303	False	NA	19	True	NA	NA	NA	156194486	156211719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_54508_10	chr4	+	2731	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_5	54.8475158963467	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8292	False	NA	22	True	NA	NA	NA	156194475	156211722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_54509_13	chr4	+	2965	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	85	junction_1	49.4621067080649	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8290	False	NA	22	True	NA	NA	NA	156194473	156211722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
Isoform_54510_6	chr4	+	3048	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	85	junction_1	45.1781055876604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8297	False	NA	22	True	NA	NA	NA	156194480	156211722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_54511_3	chr4	+	2934	8	FSM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	3	0	3	0	multi-exon	FALSE	canonical	3	88	junction_1	44.3313129302804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8261	False	NA	22	True	NA	NA	NA	156194444	156211722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
Isoform_54515_3510	chr4	+	2576	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	16	193	16	-180	multi-exon	FALSE	canonical	0	0	junction_6	452.638591421947	3510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320482	156331880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
Isoform_54517_981	chr4	+	2734	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	14	37	14	-24	multi-exon	TRUE	canonical	0	0	junction_6	452.638591421947	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTTCTTCTTAAG	NA	False	NA	-11	True	NA	NA	NA	156320480	156332036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
Isoform_54539_52	chr4	+	1359	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	225.311693826574	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407537	117531478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_54540_6	chr4	+	1431	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	282.366755081047	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTAGTGTGTCTGGAG	NA	False	NA	6	True	AATAAA	-13	NA	117407528	117531475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
Isoform_54541_21	chr4	+	1353	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	270.430097252506	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407537	117531478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_54542_58	chr4	+	1285	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	221.525785111774	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407537	117531480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_54543_45	chr4	+	1015	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-34	0	at_least_one_novel_splicesite	TRUE	canonical	3	91	junction_1	242.081769931842	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407527	117531478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_54544_4	chr4	+	1068	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	319.673487935564	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407542	117531480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
Isoform_54545_14	chr4	+	1277	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	247.509142276006	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407537	117531478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
Isoform_54546_6	chr4	+	645	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	321.524785203256	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500233	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500373_146502756_146502850_146547961_146548020_146548860_146548988_146550437
Isoform_54547_87	chr4	+	691	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500233	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54549_32	chr4	+	714	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	275.60595058888	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500233	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500373_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_54551_11	chr4	+	777	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.355308018716	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500233	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54552_8	chr4	+	799	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500234	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_54553_5	chr4	+	552	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	367.768949205884	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1861	False	NA	NA	False	AAAAAG	-33	NA	146516846	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437
Isoform_54554_58	chr4	+	598	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1861	False	NA	NA	False	AAAAAG	-33	NA	146516846	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54557_25	chr4	+	621	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1861	False	NA	NA	False	AAAAAG	-33	NA	146516846	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_54558_6	chr4	+	697	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	304.163114134505	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	1855	False	NA	NA	False	AAAAAG	-33	NA	146516840	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54559_6	chr4	+	2135	6	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390416	156410403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
Isoform_54560_4	chr4	+	2188	6	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390362	156410402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
Isoform_54561_29	chr4	+	1925	7	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	156390348	156410403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
Isoform_54567_24	chr4	+	846	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500249	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54570_20	chr4	+	898	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33256	-4081	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	279.837810168676	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	146500223	146550668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500544_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_54573_8	chr4	+	982	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33257	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500222	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
Isoform_54576_7	chr4	+	2522	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.7430625533113	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696417	115736445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_54577_29	chr4	+	2487	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.5606593255112	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTGGTGGTCCTTTTG	NA	False	NA	17	True	AATAAA	-23	NA	115696417	115736454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_54578_3	chr4	+	2336	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	-5	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_9	56.1047507396259	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCTGTGGCAGCCTTG	NA	False	NA	5	True	AATAAA	-11	NA	115696417	115736442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
Isoform_54579_26	chr4	+	409	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	49	-38430	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	52.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146695466	146703634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146695757_146697966_146698060_146703608
Isoform_5458_13	chr11	-	2125	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	-12	2	-10	-2	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTGTCCCGGGTGAT	3846	False	NA	-4	True	AATAAA	-20	NA	55310736	55285327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
Isoform_54581_5	chr4	+	423	3	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	85.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145508073	145516071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_145508381_145510590_145510684_145516048
Isoform_54583_13	chr4	+	1002	2	Genic_Genomic	ENSMUSG00000082352.2	novel	634	1	NA	NA	-9916	87	multi-exon	FALSE	canonical	3	94	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAGCTGTGTAAGATT	7445	False	NA	13	True	AAGAAA	-9	NA	145291181	145301818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_145291368_145301002
Isoform_54585_3	chr4	+	1546	3	Genic_Genomic	ENSMUSG00000082352.2	novel	634	1	NA	NA	-9912	767	multi-exon	FALSE	non_canonical	0	0	junction_2	47	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTATTGTTGTCCT	7449	False	NA	NA	False	AGTAAA	-10	NA	145291185	145302498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_145291368_145301002_145301704_145301835
Isoform_54586_7	chr4	+	276	3	Genic_Genomic	ENSMUSG00000094417.2	novel	565	1	NA	NA	-85	14218	multi-exon	FALSE	canonical	3	220	junction_1	12	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145501203	145516071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_145501361_145510590_145510684_145516045
Isoform_54587_16	chr4	+	719	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000094417.2	novel	2413	3	NA	NA	-89	-2022	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTCTGTAAACAGTTTA	NA	False	NA	NA	False	AATACA	-1	NA	145501199	145554490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
Isoform_54589_5	chr4	+	665	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000070605.5	novel	4550	4	NA	NA	-6741	-4084	multi-exon	FALSE	canonical	3	35	junction_4	264.387140383189	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146200159	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr4_+_146200273_146209452_146209546_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_5459_29	chr11	-	2066	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	49	0	49	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3907	False	NA	-2	True	AATAAA	-22	NA	55310675	55285325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
Isoform_54590_3	chr4	+	662	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6732	38388	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.2250933299282	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTCTGTAAACAGTTTA	NA	False	NA	NA	False	AATACA	-1	NA	146200168	146253392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146200273_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
Isoform_54592_5	chr4	+	2669	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3307	782	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTGAGTATTTTTTT	NA	False	NA	NA	False	AATGAA	-11	NA	144053511	144060817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
Isoform_54595_19	chr4	+	409	3	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	237	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145508090	145516071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_145508381_145510590_145510684_145516045
Isoform_54597_3	chr4	+	846	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43720	-2028	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	111.708549359483	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	145508086	145554484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_145508381_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
Isoform_54599_11	chr4	+	890	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4084	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	287.112800132631	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGACTCTGTAAAC	NA	False	NA	NA	False	AAAAAG	-33	NA	146500249	146550665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_5460_67	chr11	-	1146	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	31	938	31	-17	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	3889	False	NA	NA	False	AATACA	-11	NA	55310693	55286263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
Isoform_54601_6	chr4	+	713	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40310	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	296.255970403973	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146493169	146550664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146493332_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
Isoform_54605_7	chr4	+	3341	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2436	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTGGCTTTCATGATTC	4817	False	NA	26	True	AATAAA	-19	NA	140431219	140450529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_54606_15	chr4	+	1609	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2426	-1744	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTATTTCTTTTCTCCC	4807	False	NA	19	True	NA	NA	NA	140431209	140448787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
Isoform_54609_6	chr4	+	2023	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	441	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	88.3026613415473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGACTGTGTGTCCG	4721	False	NA	28	True	AATAAA	-35	NA	129996791	130021930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_129997068_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_5461_35	chr11	-	1191	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	-12	936	-10	-15	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAG	3846	False	NA	NA	False	AATACA	-13	NA	55310736	55286261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
Isoform_54610_5	chr4	+	2071	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	374	-16	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	88.3026613415473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGTTTTCCACCATGA	4654	False	NA	9	True	AATAAA	-16	NA	129996724	130021911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_129997068_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
Isoform_54611_3	chr4	+	1192	7	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16178	-7421	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.40575824674229	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAACTCCTCTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	109075503	109103599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344
Isoform_54612_6	chr4	+	1986	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16170	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGCTTGTCTTATTTC	NA	False	NA	2	True	TTTAAA	-19	NA	109075511	109111766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
Isoform_54613_7	chr4	+	1730	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16137	1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGGTTTTTCTTTTGTT	NA	False	NA	NA	False	TATAAA	-18	NA	109075544	109111543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
Isoform_54615_10	chr4	+	911	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43736	-2023	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.0898582096069	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	145508070	145554489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_145508425_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
Isoform_54617_8	chr4	+	3055	5	NNC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	15265	-3864	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	7.36121593216773	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	AATACA	-6	NA	57757359	57893118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_57757427_57757600_57757684_57854561_57857038_57883023_57883203_57892868
Isoform_54618_7	chr4	+	2876	4	NNC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	15265	-3864	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	7.11805216802087	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	AATACA	-6	NA	57757359	57893118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_57757427_57757600_57757684_57854561_57857038_57892868
Isoform_54619_15	chr4	+	446	3	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCAAAAACAAAAACAAA	4292	False	NA	NA	False	NA	NA	NA	138225893	138255763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_138226002_138226562_138226737_138255599
Isoform_5462_140	chr11	-	2085	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	213	2	31	-2	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTGTCCCGGGTGAT	3889	False	NA	-4	True	AATAAA	-20	NA	55310693	55285327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_54620_13	chr4	+	1544	6	NNC	ENSMUSG00000028478.19	novel	1121	6	NA	NA	-650	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	519.17110859523	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	False	NA	21	True	AATAAA	-21	NA	44003801	44032846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_44003885_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
Isoform_54622_3	chr4	+	596	2	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTTTGTCTTGGTTCC	NA	False	NA	15	True	NA	NA	NA	48513710	48519020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_48514080_48518793
Isoform_54623_6	chr4	+	495	2	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	17	True	NA	NA	NA	48513813	48519022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_48514080_48518793
Isoform_54624_3	chr4	+	1745	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3498	-68	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.2426401617091	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGGCCTTGAATACTT	2910	False	NA	-63	True	AATAGA	-11	NA	43558833	43566992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_54625_8	chr4	+	1617	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3497	68	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	30.2426401617091	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTTTGCTCACGT	2911	False	NA	12	True	AATAAA	-14	NA	43558834	43566865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
Isoform_54627_8	chr4	+	1035	5	NNC	ENSMUSG00000029066.13	novel	810	5	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	571.487696717961	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTTGTGAGTTATTTC	NA	False	NA	17	True	AATAAA	-13	NA	155887295	155893283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_155887424_155887829_155888200_155888289_155888401_155891364_155891443_155892935
Isoform_54629_3	chr4	+	3248	15	NNC	ENSMUSG00000028859.15	novel	921	5	NA	NA	-1124	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.17274747350183	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTACTTGTTTTGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	125917218	125938229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_125917419_125923555_125923856_125925590_125925715_125925904_125926093_125927962_125928133_125928214_125928369_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
Isoform_5463_149	chr11	-	1194	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	170	936	-10	-15	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAG	3846	False	NA	NA	False	AATACA	-13	NA	55310736	55286261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_54631_5	chr4	+	2201	11	NNC	ENSMUSG00000041143.17	novel	2922	16	NA	NA	28326	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.6529443725328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	3250	False	NA	24	True	AATAAA	-15	NA	138728545	138786478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_138728573_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
Isoform_54632_7	chr4	+	2062	12	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	190.138270696541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876653	116944045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_116877240_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
Isoform_54633_7	chr4	+	3714	2	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAGAAAGAAAGA	0	True	NA	NA	False	NA	NA	NA	53341419	53346190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_53341538_53342594
Isoform_54634_5	chr4	+	3824	21	NNC	ENSMUSG00000039713.18	novel	2792	7	NA	NA	473	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2496715312717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	3400	False	NA	32	True	TATAAA	-21	NA	152181648	152199851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_152181816_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
Isoform_54635_7	chr4	+	2268	7	NNC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	18760	1	intron_retention	FALSE	canonical	3	14	junction_1	86.9471423081607	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTTGATCGTGTGTG	5572	False	NA	24	True	NA	NA	NA	139369179	139376999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_139369278_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
Isoform_54636_3	chr4	+	562	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-258094	-844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.96362433705	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCAGTGAATGTGACA	8149	False	NA	13	True	NA	NA	NA	147318779	147597033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_147318928_147592042_147592098_147595209_147595337_147596801
Isoform_54637_7	chr4	+	457	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	45	-38430	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	9	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146695462	146703634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_146695801_146697966_146698060_146703608
Isoform_54638_5	chr4	+	1235	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3410	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATGTGTATGGGTG	NA	False	NA	NA	False	NA	NA	NA	140541713	140544816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_140542139_140544006
Isoform_54639_3	chr4	+	665	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAATGTTTAGCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	77228968	77232614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_+_77229411_77232391
Isoform_5464_57	chr11	-	2130	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	170	0	-10	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3846	False	NA	-2	True	AATAAA	-22	NA	55310736	55285325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_54640_3	chr4	+	2567	29	NNC	ENSMUSG00000028626.6	novel	752	5	NA	NA	3615	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.8286887522475	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTGGATGAGGATGG	NA	False	NA	25	True	AATAAA	-26	NA	120900559	120912523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_120900775_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
Isoform_54641_5	chr4	+	1980	9	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	36	-14	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	31.8313426515439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTCATCTGTCCTT	78	False	NA	2	True	AATAAA	-14	NA	103171044	103223626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_103171196_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
Isoform_54642_3	chr4	+	1629	4	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.78531435144	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	22	False	NA	14	True	NA	NA	NA	48539938	48561918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_48539966_48549921_48549998_48552379_48552831_48560843
Isoform_54644_4	chr4	+	342	3	NNC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	3785	30	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGAGAAGAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	152429836	152438113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_152429935_152432392_152432521_152437997
Isoform_54645_4	chr4	+	774	2	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	5410	False	NA	NA	False	NA	NA	NA	129777965	129779185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129778259_129778704
Isoform_54648_3	chr4	+	1499	3	NNC	ENSMUSG00000028801.15	novel	1507	9	NA	NA	37346	-104	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGCCGGGTTCTTTGTG	NA	False	NA	7	True	ATTAAA	-19	NA	135260643	135265010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_135260829_135260949_135261141_135263887
Isoform_54649_3	chr4	+	733	5	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3674043852949	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148686974	148688876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_148687005_148687124_148687354_148687448_148687627_148688143_148688276_148688712
Isoform_5465_279	chr11	-	1151	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	213	936	31	-15	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAG	3889	False	NA	NA	False	AATACA	-13	NA	55310693	55286261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_54650_3	chr4	+	580	2	NNC	ENSMUSG00000028298.11	novel	687	4	NA	NA	12640	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGATGTGCCGCCTTC	1274	False	NA	NA	False	AATAAA	-17	NA	34906427	34907369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_34906704_34907065
Isoform_54655_9	chr4	+	186	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTAAGGGTGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	99537448	99537634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_99537400_99537600
Isoform_54656_9	chr4	-	1573	1	Antisense	novelGene_ENSMUSG00000067261.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	99545525	99543952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_99544000_99545500
Isoform_54657_6	chr4	-	2095	1	Antisense	novelGene_ENSMUSG00000067261.5_AS_novelGene_ENSMUSG00002076832.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99546050	99543955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_99544000_99546000
Isoform_54658_24	chr4	+	2536	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-161	-51	-161	51	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTGTTTTAATTAGGT	NA	False	NA	6	True	AATAAA	-16	NA	99544374	99546910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_99544400_99546900
Isoform_54660_6	chr4	+	166	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAACAATTGCAGG	NA	False	NA	NA	False	NA	NA	NA	99565938	99566104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_99565900_99566100
Isoform_54661_7	chr4	+	2867	1	NIC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	41	-54973	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTAGTCTCTCGAATTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99786651	99789518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_99786700_99789500
Isoform_54662_15	chr4	+	2497	1	Genic_Genomic	ENSMUSG00000028532.15	novel	NA	NA	NA	NA	-2	-223892	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	TTTAAA	-6	NA	100633869	100636366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_100633900_100636400
Isoform_54663_3	chr4	-	2210	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-2199	72	2199	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTGTATCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	101204152	101201942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_101201900_101204200
Isoform_54664_5	chr4	-	431	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-420	72	420	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATAGTGACATGGCTTT	NA	False	NA	1	True	AATAAA	-19	NA	101204152	101203721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_101203700_101204200
Isoform_54668_12	chr4	-	175	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGCATT	2372	False	NA	NA	False	NA	NA	NA	101901319	101901144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_101901100_101901300
Isoform_5467_13	chr11	-	1230	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	132	938	-48	-17	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	3808	False	NA	NA	False	AATACA	-11	NA	55310774	55286263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
Isoform_54670_12	chr4	+	3212	1	FSM	ENSMUSG00000083246.2	ENSMUST00000120647.2	1953	1	-924	-335	-924	335	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGGA	-1	True	NA	NA	False	NA	NA	NA	12113359	12116571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_12113400_12116600
Isoform_54673_9	chr4	+	745	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-71	454	-71	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTACTGCTGCAT	NA	False	NA	NA	False	CATAAA	-37	NA	103420527	103421272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_103420500_103421300
Isoform_54675_10	chr1	+	177	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52730567	52730744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_52730600_52730700
Isoform_54676_8	chr4	+	3276	1	FSM	ENSMUSG00000081593.2	ENSMUST00000117060.2	1963	1	-980	-333	-980	333	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAACTGAAC	8	False	NA	NA	False	AATAAA	-20	NA	12124309	12127585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_12124300_12127600
Isoform_54681_6	chr4	+	4170	1	NIC	ENSMUSG00000043572.8	novel	3046	2	NA	NA	5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508307	106512477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_106508300_106512500
Isoform_54684_3	chr5	-	184	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	115500881	115500697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_115500700_115500900
Isoform_54687_11	chr4	+	1107	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	745	-733	745	733	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGCTGTTTGGTTTTT	436	False	NA	NA	False	AAAAAG	-7	NA	12233577	12234684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_12233600_12234700
Isoform_54688_13	chrX	+	760	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	697	-389	697	389	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTAGTTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	79501044	79501804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79501000_79501800
Isoform_54696_8	chr4	-	365	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	107222443	107222078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_107222100_107222400
Isoform_54698_5	chr4	+	176	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	107224459	107224635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_107224500_107224600
Isoform_54699_3	chr2	+	188	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	32356876	32357064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_32356900_32357100
Isoform_5470_10	chr11	-	1560	13	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_12	285.938549633775	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	578	False	NA	NA	False	AATACA	-11	NA	55314004	55286263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904_55311027_55312068_55312192_55313826
Isoform_54702_3	chr4	+	196	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTAAAGACTTGT	7595	False	NA	NA	False	NA	NA	NA	108200675	108200871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_108200700_108200900
Isoform_54703_3	chr4	-	327	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108263095	108262768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_108262800_108263100
Isoform_54704_6	chr4	+	189	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	108273907	108274096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_108273900_108274100
Isoform_54706_18	chr4	-	179	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCG	NA	False	NA	NA	False	NA	NA	NA	108355758	108355579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_108355600_108355800
Isoform_54708_10	chr8	-	178	1	Intergenic	novelGene_1885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4432535	4432357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_4432400_4432500
Isoform_54709_3	chr4	-	179	1	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAAAAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	108586704	108586525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_108586500_108586700
Isoform_54710_223	chr4	+	1548	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	75	6	75	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACCTGCTGGTCTCTT	NA	False	NA	3	True	AATAAA	-9	NA	108705056	108706604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_108705100_108706600
Isoform_54711_3	chr4	+	161	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108760807	108760968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_108760800_108761000
Isoform_54712_3	chr4	-	1745	1	NIC	ENSMUSG00000028559.18	novel	2871	24	NA	NA	-1	-28691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATATATTAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	109059434	109057689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_109057700_109059400
Isoform_54713_7	chr4	-	2941	1	NIC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-17	-13426	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAAAAAT	6	True	NA	NA	False	NA	NA	NA	14826412	14823471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_14823500_14826400
Isoform_54715_12	chr4	-	240	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCAGGAAGCAGAGGTA	7760	False	NA	NA	False	AAAAAG	-39	NA	114962754	114962514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_114962500_114962800
Isoform_54718_3	chr4	+	175	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115965212	115965387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_115965200_115965400
Isoform_54719_4	chr4	+	172	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	8288	False	NA	NA	False	NA	NA	NA	116132119	116132291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_116132100_116132300
Isoform_54720_6	chr4	-	181	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116265695	116265514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_116265500_116265700
Isoform_54721_38	chr4	-	577	1	NIC	ENSMUSG00000028693.16	novel	2118	14	NA	NA	0	-8331	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116484690	116484113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116484100_116484700
Isoform_54722_3	chr4	+	215	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTATTTAGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	116485953	116486168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_116486000_116486200
Isoform_54723_15	chr4	+	246	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116487097	116487343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_116487100_116487300
Isoform_54725_3	chr4	+	1098	1	Genic_Genomic	ENSMUSG00000043252.9	novel	NA	NA	NA	NA	-55	-19880	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAATTACACTACAA	1	True	NA	NA	False	NA	NA	NA	15265775	15266873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_15265800_15266900
Isoform_54730_59	chr4	-	1590	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	213	1	213	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGCCTCTGTGTCT	7301	False	NA	-7	True	AATAAA	-25	NA	116678691	116677101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_116677100_116678700
Isoform_54732_28	chr4	+	180	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAATATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116916757	116916937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_116916800_116916900
Isoform_54733_4	chr13	-	209	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	4075	False	NA	NA	False	NA	NA	NA	64366278	64366069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_64366100_64366300
Isoform_54734_9	chr4	-	2695	1	NIC	ENSMUSG00000073771.12	novel	597	5	NA	NA	-31	982	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	9676	False	NA	NA	False	NA	NA	NA	116982886	116980191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_116980200_116982900
Isoform_54735_4	chr12	-	177	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	6092	False	NA	NA	False	NA	NA	NA	87362933	87362756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_87362800_87362900
Isoform_54738_3	chr4	-	210	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAATAATAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	117563722	117563512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_117563500_117563700
Isoform_54750_25	chr4	+	185	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	646	False	NA	NA	False	NA	NA	NA	119137709	119137894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_119137700_119137900
Isoform_54752_6	chr4	+	230	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGACAGCAGCTGACAG	NA	False	NA	3	True	NA	NA	NA	119227056	119227286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_119227100_119227300
Isoform_54753_3	chr4	-	210	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCCATTGCTAGATCG	NA	False	NA	NA	False	AAAACA	-12	NA	119367499	119367289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_119367300_119367500
Isoform_54754_12	chr4	+	219	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAATTTAATTTTGCT	NA	False	NA	NA	False	AAAAAG	-23	NA	119390223	119390442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_119390200_119390400
Isoform_54755_5	chr4	-	186	1	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGGTTAAACAAAACTG	1050	False	NA	NA	False	NA	NA	NA	119421336	119421150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_119421200_119421300
Isoform_54756_10	chr8	+	256	1	Intergenic	novelGene_1973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	112479309	112479565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_112479300_112479600
Isoform_54757_4	chr4	-	170	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120457529	120457359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_120457400_120457500
Isoform_54758_46	chr4	+	1248	1	FSM	ENSMUSG00000070803.7	ENSMUST00000094814.6	1249	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTTCCATTTCCT	6119	False	NA	8	True	AATAAA	-17	NA	120523768	120525016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_120523800_120525000
Isoform_54759_9	chr4	-	202	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATAAGGATGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	120856056	120855854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_120855900_120856100
Isoform_54760_5	chr4	-	212	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	8631	False	NA	NA	False	AAAAAG	-20	NA	120971464	120971252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_120971300_120971500
Isoform_54761_6	chr4	-	2761	1	FSM	ENSMUSG00000049878.14	ENSMUST00000222814.2	2752	1	-10	1	-10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6454	False	NA	NA	False	NA	NA	NA	121072291	121069530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_121069500_121072300
Isoform_54762_6	chr4	+	1039	1	NIC	ENSMUSG00000028657.15	novel	2381	9	NA	NA	0	-11691	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAATAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	122730038	122731077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_122730000_122731100
Isoform_54764_4	chr13	-	182	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGATGCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	92889768	92889586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_92889600_92889800
Isoform_5477_797	chr11	-	450	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	91	0	49	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55351974	55337466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
Isoform_54770_3	chr4	+	178	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGGGTTATTTGGTT	NA	False	NA	NA	False	NA	NA	NA	16850553	16850731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_16850600_16850700
Isoform_54771_4	chr12	+	181	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3237	False	NA	NA	False	NA	NA	NA	79765617	79765798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_79765600_79765800
Isoform_54772_3	chr4	-	176	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAATGAAGG	8962	False	NA	NA	False	NA	NA	NA	123477456	123477280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_123477300_123477500
Isoform_54773_3	chr4	+	2271	1	NIC	ENSMUSG00000043333.13	novel	1217	8	NA	NA	-19	667	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAGTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	123703687	123705958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_123703700_123706000
Isoform_54774_7	chr4	+	2442	1	NIC	ENSMUSG00000028647.14	novel	1685	5	NA	NA	-38	-2279	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123798795	123801237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_123798800_123801200
Isoform_54775_7	chr4	-	2903	1	FSM	ENSMUSG00000085875.4	ENSMUST00000238344.2	2706	1	789	-986	35	986	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	123811027	123808124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_123808100_123811000
Isoform_54776_5	chr4	-	5249	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252214	124246965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_124247000_124252200
Isoform_5478_110	chr11	-	488	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	54	-1	12	1	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTCTGGTGTATGTTC	NA	False	NA	-6	True	AATAAA	-21	NA	55352011	55337465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
Isoform_54783_40	chr4	-	558	1	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGAGGAAAATGTCCCA	NA	False	NA	NA	False	NA	NA	NA	124252215	124251657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_124251700_124252200
Isoform_54785_181	chr4	-	497	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGGGTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	124252215	124251718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_124251700_124252200
Isoform_54786_4	chr4	-	561	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGGTTTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	124252277	124251716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_124251700_124252300
Isoform_54787_15	chr8	-	429	1	Intergenic	novelGene_1996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGGGTTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	129480221	129479792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_129479800_129480200
Isoform_5479_17	chr11	-	1802	14	NNC	ENSMUSG00000020523.15	novel	1765	14	NA	NA	-32	-12	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	137.86692837961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57409475	57374629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405118_57409398
Isoform_54790_4	chr4	+	2218	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	847	784	847	-784	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTAACAAAAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	124551446	124553664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_124551400_124553700
Isoform_54791_3	chr4	+	178	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	18619883	18620061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_18619900_18620100
Isoform_54792_5	chr4	-	2489	1	FSM	ENSMUSG00000078570.11	ENSMUST00000184704.2	1251	1	-850	-388	16	388	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGTAGA	7205	False	NA	NA	False	AAAAAG	-22	NA	124744973	124742484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_124742500_124745000
Isoform_54794_3	chr4	+	205	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAAGAAAGTA	9608	False	NA	NA	False	NA	NA	NA	124761236	124761441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_124761200_124761400
Isoform_54795_3	chr4	+	178	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTAGAATCCCG	NA	False	NA	NA	False	NA	NA	NA	19006331	19006509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_19006300_19006500
Isoform_54796_6	chr4	+	1987	1	NIC	ENSMUSG00000028869.14	novel	690	6	NA	NA	25	-5576	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124923809	124925796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_124923800_124925800
Isoform_54800_3	chr4	-	194	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAACCTTGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	125886086	125885892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_125885900_125886100
Isoform_54801_3	chr4	-	1033	1	Genic_Genomic	ENSMUSG00000028228.6	novel	NA	NA	NA	NA	23398	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGGTTTTCATTT	6307	False	NA	0	True	AATAAA	-21	NA	19520280	19519247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_19519200_19520300
Isoform_54802_3	chr4	-	3982	1	Genic_Genomic	ENSMUSG00000028228.6	novel	NA	NA	NA	NA	20444	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATAGCTGTGTTTGGTTTT	3353	False	NA	-5	True	AATAAA	-16	NA	19523234	19519252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_19519300_19523200
Isoform_54803_5	chr4	-	245	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATTAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	125940312	125940067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_125940100_125940300
Isoform_54805_3	chr4	-	176	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	125990020	125989844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_125989800_125990000
Isoform_54807_3	chr4	-	1762	1	NIC	ENSMUSG00000028228.6	novel	5648	16	NA	NA	-7	-18754	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAAACAAACAAACAA	5	True	NA	NA	False	NA	NA	NA	19570090	19568328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_19568300_19570100
Isoform_54808_5	chr4	+	583	1	Genic_Genomic	ENSMUSG00000028229.12	novel	NA	NA	NA	NA	-9	-22919	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGGAAAAAAAAAAAAGAA	-25	True	NA	NA	False	NA	NA	NA	19575152	19575735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_19575200_19575700
Isoform_54809_4	chr4	+	187	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	126306984	126307171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_126307000_126307200
Isoform_5481_57	chr11	-	1754	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	-10	813	-10	-14	multi-exon	FALSE	canonical	3	63	junction_13	118.75144346678	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	57409453	57374631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
Isoform_54811_14	chr4	-	3656	1	ISM	ENSMUSG00000041530.18	ENSMUST00000239428.2	7065	19	29752	2	4692	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCAGTCTGTTTTTTTT	6152	False	NA	-22	True	TATAAA	-24	NA	126332462	126328806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_126328800_126332500
Isoform_54813_8	chr4	+	468	1	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-17	-2841	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126450770	126451238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_126450800_126451200
Isoform_54817_7	chr4	-	178	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	126970725	126970547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_126970500_126970700
Isoform_54818_12	chr15	+	177	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	39045857	39046034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_39045900_39046000
Isoform_54819_10	chr4	+	233	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATCCCAGGTATGG	NA	False	NA	NA	False	NA	NA	NA	126993291	126993524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_126993300_126993500
Isoform_5482_7	chr11	-	2551	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	2	4	2	-4	multi-exon	TRUE	canonical	3	63	junction_13	118.75144346678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	57409441	57373822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
Isoform_54820_8	chr4	+	3605	1	NIC	ENSMUSG00000070737.11	novel	1762	3	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019832	127023437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_127019800_127023400
Isoform_54821_3	chr4	+	167	1	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTTTAAAAAAGAAGT	427	False	NA	NA	False	NA	NA	NA	127030599	127030766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_127030600_127030800
Isoform_54822_3	chr4	+	176	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	5907	False	NA	NA	False	NA	NA	NA	127041580	127041756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_127041600_127041800
Isoform_5483_278	chr11	-	1747	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57409441	57374629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
Isoform_54830_6	chr4	-	172	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	19850594	19850422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_19850400_19850600
Isoform_54832_4	chr4	+	194	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGACTGACTAA	NA	False	NA	NA	False	NA	NA	NA	127343302	127343496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_127343300_127343500
Isoform_54833_3	chr11	+	176	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTCT	NA	False	NA	NA	False	NA	NA	NA	33494834	33495010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_33494800_33495000
Isoform_54834_19	chr4	+	177	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	128505768	128505945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_128505800_128505900
Isoform_54839_3	chr4	-	214	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACCAACACAGCAAAGC	NA	False	NA	NA	False	AATAAA	-21	NA	128964217	128964003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_128964000_128964200
Isoform_5484_30	chr11	-	2560	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	57409447	57373822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
Isoform_54840_18	chr4	+	296	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	700	False	NA	NA	False	NA	NA	NA	129072863	129073159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129072900_129073200
Isoform_54843_13	chr4	-	179	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129149790	129149611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_129149600_129149800
Isoform_54844_8	chr4	+	193	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGTAAAAAAAAAACAGCA	618	False	NA	NA	False	NA	NA	NA	129213358	129213551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129213400_129213600
Isoform_54845_3	chr4	+	175	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129222770	129222945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129222800_129222900
Isoform_54847_3	chr4	+	485	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATATATATATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	129269133	129269618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129269100_129269600
Isoform_54848_9	chr15	+	186	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103202734	103202920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_103202700_103202900
Isoform_54849_6	chr4	-	174	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21725180	21725006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_21725000_21725200
Isoform_5485_11	chr11	-	2189	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	13	-12	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_13	127.824121030265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57409415	57374629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57408930
Isoform_54850_3	chr4	+	168	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAACCTTATTTTAT	9741	False	NA	3	True	NA	NA	NA	129345769	129345937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129345800_129345900
Isoform_54851_9	chr4	+	1267	1	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	-5	-3569	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	-12	True	NA	NA	False	NA	NA	NA	21727747	21729014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_21727700_21729000
Isoform_54856_4	chr4	+	180	1	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCCCATCTT	436	False	NA	NA	False	NA	NA	NA	129474512	129474692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129474500_129474700
Isoform_54858_32	chr4	-	372	1	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCTAC	8964	False	NA	NA	False	ATTAAA	-18	NA	129733329	129732957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_129733000_129733300
Isoform_54859_4	chr4	-	480	1	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCTAC	8856	False	NA	NA	False	ATTAAA	-18	NA	129733437	129732957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_129733000_129733400
Isoform_54861_16	chr4	+	181	1	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	6451	False	NA	NA	False	NA	NA	NA	129779006	129779187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_129779000_129779200
Isoform_54862_3	chr4	-	2667	1	Antisense	novelGene_ENSMUSG00000028782.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	129899598	129896931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_129896900_129899600
Isoform_54864_9	chr4	-	237	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACATTATAGTTGG	NA	False	NA	NA	False	NA	NA	NA	130364765	130364528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_130364500_130364800
Isoform_54866_36	chr4	-	321	1	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130369676	130369355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_130369400_130369700
Isoform_54867_5	chr4	+	1658	1	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	-53864	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGTAAAAACAA	NA	False	NA	NA	False	ATTAAA	-43	NA	130390670	130392328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_130390700_130392300
Isoform_54868_15	chr4	-	221	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTACTCCTAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	130410800	130410579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_130410600_130410800
Isoform_54873_12	chr4	+	2615	1	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	9	-15904	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAAAGGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131600936	131603551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_131600900_131603600
Isoform_54875_3	chr4	-	1151	1	Genic_Genomic	ENSMUSG00000089687.3	novel	NA	NA	NA	NA	41	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	132030655	132029504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_132029500_132030700
Isoform_54876_8	chr4	+	303	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	132031018	132031321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_132031000_132031300
Isoform_54877_4	chr4	+	458	1	NIC	ENSMUSG00000086290.10	novel	896	4	NA	NA	0	-1157	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGTCAGGA	NA	False	NA	NA	False	ATTAAA	-5	NA	132035986	132036444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_132036000_132036400
Isoform_54880_59	chr4	-	766	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-173	-388	-173	388	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080010	132079244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132079200_132080000
Isoform_54881_37	chr4	-	1700	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-1107	-388	-1107	388	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132079200_132080900
Isoform_54882_228	chr4	-	371	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-173	7	-173	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAATTTAAATTCCTA	NA	False	NA	NA	False	NA	NA	NA	132080010	132079639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_132079600_132080000
Isoform_54890_3	chr4	+	240	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGGTAATTCTGTGTA	6988	False	NA	NA	False	AATAAA	-22	NA	132588485	132588725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_132588500_132588700
Isoform_54891_10	chr4	+	1638	1	Genic_Genomic	ENSMUSG00000083816.4	novel	NA	NA	NA	NA	-216	-442	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATTTAAAAAT	230	False	NA	NA	False	NA	NA	NA	132611857	132613495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_132611900_132613500
Isoform_54892_3	chr4	+	269	1	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATTAAATTTTGGGG	1629	False	NA	NA	False	NA	NA	NA	132625955	132626224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_132626000_132626200
Isoform_54894_5	chr4	+	177	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	132654049	132654226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_132654000_132654200
Isoform_54895_5	chr4	+	187	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	1742	False	NA	NA	False	NA	NA	NA	132733576	132733763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_132733600_132733800
Isoform_54896_3	chr4	+	296	1	Genic_Genomic	ENSMUSG00000037692.15	novel	NA	NA	NA	NA	-3	-43248	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGGCAGAGAGAGAGA	1223	False	NA	NA	False	NA	NA	NA	132738850	132739146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_132738800_132739100
Isoform_54897_3	chr4	-	2411	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	132766524	132764113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_132764100_132766500
Isoform_54898_13	chr4	+	833	1	NIC	ENSMUSG00000028247.3	novel	2651	7	NA	NA	9	-19931	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACAAAAACAAAAACA	-1	True	NA	NA	False	NA	NA	NA	21879681	21880514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_21879700_21880500
Isoform_5490_17	chr11	-	744	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	-30	0	-30	0	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	False	NA	-3	True	NA	NA	NA	57692273	57686324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
Isoform_54900_3	chr4	+	3974	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	65271	7	6758	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCACCTTTGGTGTCTG	4938	False	NA	37	True	GATAAA	-15	NA	132923086	132927060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_132923100_132927100
Isoform_54901_3	chr4	+	2755	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	66494	3	7981	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTGGTGTCTGTGTG	6161	False	NA	41	True	GATAAA	-19	NA	132924309	132927064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_132924300_132927100
Isoform_54902_3	chr4	+	2585	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	66665	2	8152	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTTGGTGTCTGTGTGT	6332	False	NA	42	True	GATAAA	-20	NA	132924480	132927065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_132924500_132927100
Isoform_54903_3	chr4	+	1970	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	67279	3	8766	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTGGTGTCTGTGTG	6946	False	NA	41	True	GATAAA	-19	NA	132925094	132927064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_132925100_132927100
Isoform_54904_3	chr4	-	1524	1	Antisense	novelGene_ENSMUSG00000028862.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATATGTTGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	132968745	132967221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_132967200_132968700
Isoform_54908_3	chr4	-	296	1	Genic_Genomic	ENSMUSG00000037622.15	novel	NA	NA	NA	NA	-1	-39388	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACAAATCAAACTCTA	8386	False	NA	NA	False	NA	NA	NA	133080793	133080497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_133080500_133080800
Isoform_54909_8	chr4	+	1984	2	NNC	ENSMUSG00000028850.3	novel	2004	7	NA	NA	7	-6249	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133302062	133304072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_133303347_133303372
Isoform_5491_4	chr11	-	653	3	FSM	ENSMUSG00000087165.8	ENSMUST00000140069.2	502	3	-44	-107	-25	0	multi-exon	FALSE	canonical	3	13	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	False	NA	-3	True	NA	NA	NA	57692268	57686324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_57686621_57686851_57687000_57692059
Isoform_54911_202	chr4	-	1297	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	316	0	316	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	NA	False	NA	-10	True	AATAAA	-18	NA	133329163	133327866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133327900_133329200
Isoform_54912_25	chr4	-	1345	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	268	0	268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	9998	False	NA	-10	True	AATAAA	-18	NA	133329211	133327866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133327900_133329200
Isoform_54913_6	chr4	-	1490	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	120	3	120	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTCTTCTTCAGTTATT	9949	False	NA	-13	True	AATAAA	-15	NA	133329359	133327869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_133327900_133329400
Isoform_54914_10	chr4	+	179	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	133354752	133354931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_133354800_133354900
Isoform_54915_6	chr4	-	217	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCACAGCAAGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133382832	133382615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_133382600_133382800
Isoform_54916_5	chr4	-	2026	1	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	72575	3	39740	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	8821	False	NA	-8	True	AATAAA	-18	NA	133408347	133406321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_133406300_133408300
Isoform_54917_3	chr4	-	2634	1	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	71968	2	39133	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	8214	False	NA	-7	True	AATAAA	-19	NA	133408954	133406320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_133406300_133409000
Isoform_54918_3	chr4	+	196	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	133529428	133529624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_133529400_133529600
Isoform_5492_3	chr11	-	4887	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	36	-1	36	1	multi-exon	TRUE	canonical	3	91	junction_2	43.3607067704434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTCGTTCTGTGGG	NA	False	NA	-33	True	TATAAA	-13	NA	58059329	58012114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_54920_4	chr11	+	192	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTCAATGCTCTTAAC	5889	False	NA	NA	False	NA	NA	NA	102301360	102301552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_102301400_102301600
Isoform_54923_3	chr4	+	168	1	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATCTTTAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133916416	133916584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_133916400_133916600
Isoform_54924_3	chr4	+	177	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTACAAGTGC	2322	False	NA	NA	False	NA	NA	NA	133958961	133959138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_133959000_133959100
Isoform_54925_3	chr4	-	3022	1	Genic_Genomic	ENSMUSG00000028840.11	novel	NA	NA	NA	NA	-25	743	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAAGCAAGGAAG	7693	False	NA	NA	False	AATATA	-9	NA	133972878	133969856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_133969900_133972900
Isoform_54927_5	chr4	+	3357	1	FSM	ENSMUSG00002075520.1	ENSMUST00020182056.1	91	1	35	-3301	35	3301	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAACTAAT	NA	False	NA	NA	False	NA	NA	NA	134195709	134199066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_134195700_134199100
Isoform_54928_8	chr4	+	1344	2	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	23	-11541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAAAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	134238332	134239697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr4_+_134239383_134239403
Isoform_54929_5	chr4	+	169	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAATCTTTAAAAAAAA	8165	False	NA	NA	False	NA	NA	NA	134255120	134255289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_134255100_134255300
Isoform_5493_4	chr11	-	4897	28	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	38.087942423091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTCTCGTTCTGTGGG	NA	False	NA	-33	True	TATAAA	-13	NA	58059339	58012114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
Isoform_54930_7	chr4	-	2571	1	NIC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	9	-16029	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134495326	134492755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_134492800_134495300
Isoform_54931_3	chr4	-	178	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	134649629	134649451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_134649500_134649600
Isoform_54934_277	chr4	-	925	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	49	-48377	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAGAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135000076	134999151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_134999200_135000100
Isoform_54935_52	chr4	-	964	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	10	-48377	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAGAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135000115	134999151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_134999200_135000100
Isoform_54937_3	chr4	+	528	1	NIC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	24	-13434	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	135648069	135648597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_135648100_135648600
Isoform_54938_4	chr4	+	172	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135649714	135649886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_135649700_135649900
Isoform_54942_8	chr4	+	3428	1	Genic_Genomic	ENSMUSG00000018983.10	novel	NA	NA	NA	NA	-119	-11105	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATAATTAAAAAAAAAAA	937	False	NA	NA	False	NA	NA	NA	135899585	135903013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_135899600_135903000
Isoform_54945_17	chr4	+	178	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCAAGGCCGG	NA	False	NA	NA	False	NA	NA	NA	137090672	137090850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_137090700_137090800
Isoform_54952_6	chr4	-	5105	2	Genic_Genomic	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	-32505	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137523630	137518491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_137522736_137522769
Isoform_54953_3	chr4	-	5212	1	Genic_Genomic	ENSMUSG00000028766.11	novel	NA	NA	NA	NA	-6	-32503	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137523701	137518489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_137518500_137523700
Isoform_54954_4	chr4	-	182	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	921	False	NA	NA	False	NA	NA	NA	137741508	137741326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_137741300_137741500
Isoform_54955_6	chr4	-	2361	1	FSM	ENSMUSG00000078235.4	ENSMUST00000105032.4	2437	1	74	2	74	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCCTCCTGTGTTGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	138123765	138121404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_138121400_138123800
Isoform_54956_8	chr4	+	1118	1	ISM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	2712	1980	2712	-1980	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTCGTTAGCCTTGTT	8456	False	NA	18	True	AATAAA	-18	NA	138184336	138185454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_138184300_138185500
Isoform_54958_3	chr4	+	2941	1	NIC	ENSMUSG00000028743.8	novel	1288	7	NA	NA	29	-3697	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139038083	139041024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_139038100_139041000
Isoform_5496_3	chr11	-	2897	4	NIC	ENSMUSG00000049755.15	novel	2862	4	NA	NA	7	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	10.6770782520313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTATTTTGGCTCGTGG	622	False	NA	NA	False	NA	NA	NA	58214165	58205961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_58208361_58210149_58210417_58213394_58213556_58214095
Isoform_54960_3	chr4	+	3035	1	ISM	ENSMUSG00000041025.16	ENSMUST00000040023.16	5227	11	85655	1	42624	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATGGTTTATGCTGCT	6349	False	NA	9	True	AATAAA	-15	NA	139344654	139347689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_139344700_139347700
Isoform_54961_4	chr4	-	4059	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	401	3347	401	-3347	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAACCAAAACCC	NA	False	NA	NA	False	NA	NA	NA	139694936	139690877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_139690900_139694900
Isoform_54962_4	chr4	-	3532	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	140129785	140126253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_140126300_140129800
Isoform_54963_3	chr4	-	389	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	5693955	5693566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_5693600_5694000
Isoform_54964_7	chr4	-	188	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTTTCATTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	26611224	26611036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_26611000_26611200
Isoform_54965_3	chr4	+	175	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	140419030	140419205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_140419000_140419200
Isoform_54966_3	chr4	-	229	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGAAACAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	140422223	140421994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_140422000_140422200
Isoform_54967_11	chr4	+	411	1	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-1	-8588	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2380	False	NA	NA	False	NA	NA	NA	140428782	140429193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140428800_140429200
Isoform_54968_18	chr4	+	339	1	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	62	-8597	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCAATAAAAAAAAAAAA	2443	False	NA	NA	False	NA	NA	NA	140428845	140429184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_140428800_140429200
Isoform_5497_5	chr11	-	526	4	FSM	ENSMUSG00000049154.13	ENSMUST00000239007.2	561	4	34	1	34	-1	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAGACTATGTCACAG	NA	False	NA	NA	False	AATAAA	-20	NA	58692752	58683629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
Isoform_5498_23	chr11	-	3038	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	10	842	10	-842	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTCTGTCAGAGCACA	7194	False	NA	-2	True	AATAAA	-14	NA	58795041	58779820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
Isoform_54980_8	chr4	-	181	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	4897	False	NA	NA	False	NA	NA	NA	141073423	141073242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_141073200_141073400
Isoform_54981_4	chr4	+	277	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAGAAAA	774	False	NA	NA	False	NA	NA	NA	141283700	141283977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_141283700_141284000
Isoform_54984_4	chr4	+	354	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTCGAAAATCCAAAAAA	4104	False	NA	4	True	NA	NA	NA	141288915	141289269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_141288900_141289300
Isoform_54986_4	chr4	+	184	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATTATAACATTTTAAA	1940	False	NA	NA	False	NA	NA	NA	141821033	141821217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_141821000_141821200
Isoform_54987_4	chr4	-	180	1	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAGAAAGAGCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	141893266	141893086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_141893100_141893300
Isoform_54988_6	chr4	-	4504	2	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	143715172	143710578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_143714711_143714800
Isoform_54989_5	chr4	-	4484	3	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	143715165	143710578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_143710653_143710695_143715077_143715136
Isoform_5499_7	chr11	-	3893	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	18	-21	18	21	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAAGTCTTGGTATTT	7202	False	NA	NA	False	AATAAA	-40	NA	58795033	58778957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
Isoform_54990_11	chr17	+	704	2	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGGAAAAGAAAAAAGAA	3595	False	NA	NA	False	NA	NA	NA	34438558	34445611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_34439079_34445427
Isoform_54991_3	chr4	+	173	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAGAAAAG	8980	False	NA	NA	False	NA	NA	NA	143728430	143728603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_143728400_143728600
Isoform_54992_3	chr4	-	1600	1	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	8	-11801	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	144135026	144133426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_144133400_144135000
Isoform_54993_3	chr4	-	1753	1	Genic_Genomic	ENSMUSG00000020220.17	novel	NA	NA	NA	NA	-1181	-4645	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTAAGCA	609	False	NA	NA	False	NA	NA	NA	144785949	144784196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_144784200_144785900
Isoform_54994_5	chr4	-	3333	2	Genic_Genomic	ENSMUSG00000028599.11	novel	3818	10	NA	NA	1	-18087	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAACAAAAAAACTGA	7833	False	NA	NA	False	NA	NA	NA	144973439	144970072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_144971595_144971628
Isoform_54996_7	chr4	+	2497	1	NIC	ENSMUSG00000028282.13	novel	300	5	NA	NA	8	-13855	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	10	True	NA	NA	False	NA	NA	NA	32615458	32617955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_32615500_32618000
Isoform_54997_6	chr4	+	1279	1	FSM	ENSMUSG00000052912.8	ENSMUST00000171805.2	1284	1	-278	283	-278	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAAATGAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	145190495	145191774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_145190500_145191800
Isoform_54999_5	chr4	+	1066	1	NIC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATACAAAAAAAGAAAAAAG	905	False	NA	NA	False	NA	NA	NA	145237339	145238405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_145237300_145238400
Isoform_55_5	ERCC-00059	+	506	1	FSM	ERCC-00059A	DQ668356	509	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TT	NA	False	NA	NA	False	NA	NA	NA	1	507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00059_+_0_500
Isoform_5500_2472	chr11	-	1949	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	0	0	0	0	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	2472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829742	58823113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
Isoform_55000_3	chr4	+	3621	1	Genic_Genomic	ENSMUSG00000078503.10	novel	NA	NA	NA	NA	-13	6655	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATCAAATAAAAAAATG	5006	False	NA	NA	False	NA	NA	NA	145241440	145245061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_145241400_145245100
Isoform_55001_3	chr4	-	182	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAAAAAAGAATGAC	NA	False	NA	NA	False	NA	NA	NA	145323071	145322889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_145322900_145323100
Isoform_55002_11	chr4	+	849	1	NIC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	9	-31098	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	145397263	145398112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_145397300_145398100
Isoform_55003_4	chr4	+	3122	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATCAAATAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	145401078	145404200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_145401100_145404200
Isoform_55005_3	chr4	+	2599	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-376	954	-376	-954	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAGAAAAGCCAA	NA	False	NA	NA	False	AAAACA	-35	NA	146003945	146006544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146003900_146006500
Isoform_55008_5	chr4	+	2467	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-244	954	-244	-954	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAGAAAAGCCAA	NA	False	NA	NA	False	AAAACA	-35	NA	146004077	146006544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146004100_146006500
Isoform_55010_5	chr4	+	1222	1	Genic_Genomic	ENSMUSG00000084127.2	novel	NA	NA	NA	NA	-544	-1002	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	146175979	146177201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_146176000_146177200
Isoform_55011_20	chr4	+	848	1	Genic_Genomic	ENSMUSG00000087207.9	novel	NA	NA	NA	NA	-3	-27500	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	4107	False	NA	NA	False	NA	NA	NA	147314737	147315585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_147314700_147315600
Isoform_55012_4	chr4	-	176	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAAAAATAAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	146511106	146510930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_146510900_146511100
Isoform_55013_3	chr4	+	555	1	FSM	ENSMUSG00000073716.7	ENSMUST00000094493.5	780	1	-226	451	-226	-451	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAAGATGATGATAATG	NA	False	NA	NA	False	NA	NA	NA	146559562	146560117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_146559600_146560100
Isoform_55014_3	chr4	+	1242	1	Genic_Genomic	ENSMUSG00000083038.2	novel	NA	NA	NA	NA	-593	-1035	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	146664492	146665734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_146664500_146665700
Isoform_55015_45	chr4	-	832	1	NIC	ENSMUSG00000045699.5	novel	750	5	NA	NA	17	-16336	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATACAAAGAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	146994030	146993198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_146993200_146994000
Isoform_55016_5	chr4	+	548	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCTGTGTTTTATATT	1288	False	NA	8	True	AATAAA	-16	NA	147014474	147015022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_147014500_147015000
Isoform_55017_30	chr4	+	849	1	Genic_Genomic	ENSMUSG00000086147.3	novel	NA	NA	NA	NA	-13	-1329	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	147056419	147057268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_147056400_147057300
Isoform_55019_3	chr4	+	462	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGACAAAATAAAAACAA	7448	False	NA	NA	False	NA	NA	NA	147318078	147318540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_147318100_147318500
Isoform_55020_16	chr4	+	495	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGCTTTGGTTGTTTTC	NA	False	NA	10	True	NA	NA	NA	147600028	147600523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_147600000_147600500
Isoform_55021_10	chr4	+	900	1	Genic_Genomic	ENSMUSG00000065999.14	novel	NA	NA	NA	NA	-16	-28781	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	147637717	147638617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_147637700_147638600
Isoform_55023_5	chr4	-	757	1	Antisense	novelGene_ENSMUSG00000065999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	147669651	147668894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_147668900_147669700
Isoform_55025_10	chr4	-	1063	1	Genic_Genomic	ENSMUSG00000062518.8	novel	NA	NA	NA	NA	-46	-28035	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATACAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147787056	147785993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_147786000_147787100
Isoform_55027_3	chr4	-	1309	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	-553	2194	-553	-2194	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGTGAGAGAATTCAA	NA	False	NA	NA	False	GATAAA	-24	NA	147823436	147822127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_147822100_147823400
Isoform_55033_16	chr4	-	3101	1	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	30	-986	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148172458	148169357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_148169400_148172500
Isoform_55035_4	chr4	-	183	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	148675027	148674844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_148674800_148675000
Isoform_55038_5	chr4	-	192	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGCTCAGCAGTTAGG	6903	False	NA	NA	False	NA	NA	NA	148737332	148737140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_148737100_148737300
Isoform_55039_5	chr4	-	195	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	33006220	33006025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_33006000_33006200
Isoform_55040_3	chr4	+	195	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTACTGACTCAT	NA	False	NA	4	True	NA	NA	NA	149293243	149293438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_149293200_149293400
Isoform_55041_3	chr4	+	218	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAAATAATTTTATA	NA	False	NA	NA	False	NA	NA	NA	149401221	149401439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_149401200_149401400
Isoform_55042_29	chr4	+	555	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-16	-161	-16	161	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	1898	False	NA	NA	False	ATTAAA	-7	NA	149541769	149542324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_149541800_149542300
Isoform_55045_3	chr4	-	223	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAACAAAAACAAAAACA	1932	False	NA	NA	False	NA	NA	NA	33170080	33169857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_33169900_33170100
Isoform_55046_3	chr4	+	307	1	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAAAATGAGTATCAG	7032	False	NA	-2	True	AATAAA	-11	NA	150155942	150156249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_150155900_150156200
Isoform_55047_42	chr4	+	2679	1	NIC	ENSMUSG00000063524.14	novel	519	6	NA	NA	0	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	150321696	150324375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_150321700_150324400
Isoform_55051_31	chr4	-	178	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150338140	150337962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_150338000_150338100
Isoform_55054_14	chr4	+	178	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	5035	False	NA	NA	False	NA	NA	NA	150578550	150578728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_150578600_150578700
Isoform_55056_10	chr17	-	221	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTACCTCATGAATGGT	NA	False	NA	NA	False	NA	NA	NA	30863911	30863690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_30863700_30863900
Isoform_55057_18	chr4	-	1213	1	NIC	ENSMUSG00000039759.11	novel	1124	4	NA	NA	0	-2309	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-33	NA	152073437	152072224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_152072200_152073400
Isoform_55058_3	chr4	+	604	1	ISM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	8272	2	8272	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGGGTGTCATGGCCT	4772	False	NA	11	True	AATAAA	-11	NA	152101531	152102135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_152101500_152102100
Isoform_55059_12	chr4	+	1626	1	NIC	ENSMUSG00000028948.17	novel	2419	6	NA	NA	1	-11282	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	7340	False	NA	NA	False	NA	NA	NA	152123778	152125404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_152123800_152125400
Isoform_55060_3	chr4	+	1677	1	NIC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-28899	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	5	True	NA	NA	False	NA	NA	NA	6191112	6192789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_6191100_6192800
Isoform_55061_9	chr8	+	177	1	Intergenic	novelGene_1983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAACAAATC	NA	False	NA	NA	False	NA	NA	NA	121451098	121451275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_121451100_121451300
Isoform_55062_7	chr4	+	2076	1	NIC	ENSMUSG00000047613.11	novel	977	3	NA	NA	0	-736	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAACCAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	154041711	154043787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_154041700_154043800
Isoform_55065_23	chr4	-	188	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154969121	154968933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_154968900_154969100
Isoform_55066_4	chr4	+	3342	1	NIC	ENSMUSG00000029056.14	novel	2508	19	NA	NA	4	-11686	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATTAAAAAATATATAAA	NA	False	NA	NA	False	NA	NA	NA	155048583	155051925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155048600_155051900
Isoform_55068_3	chr4	-	234	1	ISM	ENSMUSG00000029050.16	ENSMUST00000129314.2	4521	7	33863	125	33863	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAACAAAGAAAAAGCT	NA	False	NA	-36	True	TATAAA	-23	NA	155238890	155238656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_-_155238700_155238900
Isoform_5507_41	chr11	-	2538	3	NIC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	21	0	intron_retention	FALSE	canonical	3	1063	junction_1	6.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829721	58823113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_58825058_58827965_58828059_58829220
Isoform_55072_6	chr4	+	1358	1	NIC	ENSMUSG00000029062.15	novel	805	7	NA	NA	10	554	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGATTTT	3986	False	NA	NA	False	TTTAAA	-29	NA	155709349	155710707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_155709300_155710700
Isoform_55073_4	chr4	+	185	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTCATGTTATAGTA	NA	False	NA	NA	False	NA	NA	NA	155752168	155752353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_155752200_155752400
Isoform_55074_6	chr4	+	2036	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	103	1	103	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCACTGTCTTGTGTG	NA	False	NA	7	True	NA	NA	NA	155778901	155780937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155778900_155780900
Isoform_55075_3	chr4	+	3283	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	104	-1247	104	1247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	155778902	155782185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_155778900_155782200
Isoform_55078_6	chr4	-	987	1	Antisense	novelGene_ENSMUSG00000029068.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAATACTAAA	NA	False	NA	NA	False	NA	NA	NA	155897443	155896456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_155896500_155897400
Isoform_55086_13	chr4	-	1938	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	7	1239	7	-1239	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGTTTCTGAACAGA	7217	False	NA	NA	False	CATAAA	-17	NA	156077099	156075161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_156075200_156077100
Isoform_55087_40	chr4	-	1804	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	6	1374	6	-1374	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATCTGTGGATTA	7216	False	NA	-1	True	ACTAAA	-18	NA	156077100	156075296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_156075300_156077100
Isoform_55088_8	chr4	-	1864	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-54	1374	-54	-1374	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATCTGTGGATTA	7156	False	NA	-1	True	ACTAAA	-18	NA	156077160	156075296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_156075300_156077200
Isoform_5509_54	chr11	-	1991	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-26	2056	-26	-2056	multi-exon	FALSE	canonical	3	10	junction_1	4.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGACCTCTTGTTTCAT	NA	False	NA	1	True	AGTAAA	-21	NA	59054591	59048250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59049486_59049663_59050005_59054176
Isoform_55090_4	chr4	+	207	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATTTTTTAAAAAGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	156378545	156378752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_156378500_156378800
Isoform_55091_4	chr4	-	956	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156390750	156389794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_156389800_156390800
Isoform_55093_7	chr4	-	1159	1	Genic_Genomic	ENSMUSG00000039967.15	novel	NA	NA	NA	NA	-12	-78701	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGGACCAA	NA	False	NA	NA	False	NA	NA	NA	34882972	34881813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_34881800_34883000
Isoform_55095_4	chr4	-	199	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTTTAAAAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	6517069	6516870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_6516900_6517100
Isoform_55096_4	chr4	+	176	1	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38983275	38983451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_38983300_38983500
Isoform_55097_116	chr4	+	179	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40214114	40214293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_40214100_40214300
Isoform_55099_3	chr4	-	2612	1	NIC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	29	-7609	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAAATTAAATT	-8	True	NA	NA	False	NA	NA	NA	40269821	40267209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_40267200_40269800
Isoform_5510_4	chr11	-	4052	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-32	1	-32	-1	multi-exon	FALSE	canonical	3	10	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGGAGTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	59054597	59046195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59049486_59049663_59050005_59054176
Isoform_55100_10	chr16	-	198	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	30201133	30200935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_-_30200900_30201100
Isoform_55102_7	chr4	+	2683	1	Genic_Genomic	ENSMUSG00000083068.2	novel	NA	NA	NA	NA	-1205	361	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGGAAAGGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	8117414	8120097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_8117400_8120100
Isoform_55103_6	chr4	-	464	1	FSM	ENSMUSG00000056412.7	ENSMUST00000121600.2	306	1	-33	-125	-33	125	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6287	False	NA	NA	False	AATAAA	-12	NA	40775597	40775133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_40775100_40775600
Isoform_55104_3	chr4	+	159	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	8199	False	NA	NA	False	NA	NA	NA	40861573	40861732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_40861600_40861700
Isoform_55106_13	chr4	+	792	1	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	-40406	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	40970971	40971763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_40971000_40971800
Isoform_55108_3	chr4	+	3420	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGACTGGTGGTCGCGTC	NA	False	NA	NA	False	NA	NA	NA	8133524	8136944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_8133500_8136900
Isoform_55109_4	chr4	+	734	1	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	55136	1768	1991	576	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGCACTTGGTTGC	229	False	NA	28	True	AATAAA	-17	NA	41190878	41191612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr4_+_41190900_41191600
Isoform_55110_7	chr4	+	630	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8154772	8155402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_8154800_8155400
Isoform_55111_11	chr4	+	186	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGCCTTCACAA	NA	False	NA	NA	False	NA	NA	NA	41485043	41485229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_41485000_41485200
Isoform_55113_15	chr4	+	462	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	-91	-74	-91	74	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATAAT	12	False	NA	NA	False	ATTAAA	-17	NA	43663951	43664413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_43664000_43664400
Isoform_55114_9	chr4	+	203	1	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCACTCTGTAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	43891688	43891891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_43891700_43891900
Isoform_55115_4	chr4	+	183	1	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAACAA	7237	False	NA	NA	False	NA	NA	NA	44011683	44011866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_44011700_44011900
Isoform_55118_4	chr4	-	199	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTAGTTATAATACTG	NA	False	NA	NA	False	NA	NA	NA	44093688	44093489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_44093500_44093700
Isoform_5512_345	chr11	-	931	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	146	1	6	-1	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGTGTCACAGCCCTC	1616	False	NA	-21	True	AATAAA	-12	NA	59082632	59074701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_55120_4	chr4	+	249	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTCCCAGTAACCTG	NA	False	NA	NA	False	AAAAAG	-21	NA	44198734	44198983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_44198700_44199000
Isoform_55122_4	chr4	-	1043	1	FSM	ENSMUSG00000080916.4	ENSMUST00000118271.2	849	1	-73	-121	-73	121	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	44753198	44752155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_44752200_44753200
Isoform_55125_28	chr4	+	1911	1	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	4	-7142	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	3574878	3576789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_3574900_3576800
Isoform_55126_4	chr4	+	178	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTCACA	2777	False	NA	NA	False	NA	NA	NA	45801881	45802059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_45801900_45802100
Isoform_5513_8	chr11	-	1020	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	61	-3	61	3	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCACAGCCCTCCATA	1531	False	NA	-17	True	AATAAA	-16	NA	59082717	59074697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_55130_3	chr4	-	2546	1	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-8	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	-15	True	NA	NA	False	NA	NA	NA	46138446	46135900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_46135900_46138400
Isoform_55131_3	chr4	+	2241	1	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	139	-19107	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAACCCAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	46138751	46140992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_46138800_46141000
Isoform_55132_6	chr4	-	309	1	Antisense	novelGene_ENSMUSG00000028333.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAGCAGTCCAACCAA	NA	False	NA	NA	False	TTTAAA	-13	NA	46472521	46472212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr4_-_46472200_46472500
Isoform_55134_3	chr4	-	194	1	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	48406204	48406010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_48406000_48406200
Isoform_55135_14	chr4	-	431	1	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	-3783	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGACAAA	8	True	NA	NA	False	NA	NA	NA	48473422	48472991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_48473000_48473400
Isoform_55136_12	chr4	+	2842	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	48513813	48516655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_48513800_48516700
Isoform_55137_19	chr4	-	187	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGAGTTCTGCATA	NA	False	NA	-9	True	AATAAA	-10	NA	48579020	48578833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_48578800_48579000
Isoform_55138_5	chr4	-	201	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATATATTTAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	48666548	48666347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_48666300_48666500
Isoform_5514_6	chr11	-	1032	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	-130	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	290.128261572818	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGTCACAGCCCTCCA	1340	False	NA	-19	True	AATAAA	-14	NA	59082908	59074699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082753
Isoform_55140_10	chr4	-	841	1	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-20	47	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAAATAAAATCAT	8	False	9669114	NA	False	CATAAA	-43	NA	9669106	9668265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_9668300_9669100
Isoform_55143_4	chr4	-	2592	1	NIC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	3	-121813	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGATA	0	True	NA	NA	False	NA	NA	NA	53159892	53157300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_53157300_53159900
Isoform_55144_4	chr4	-	180	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATAGGAAA	NA	False	NA	NA	False	NA	NA	NA	10484066	10483886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_10483900_10484100
Isoform_55148_3	chr4	+	2036	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAGGGAAATGA	-3	True	NA	NA	False	NA	NA	NA	55477743	55479779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_55477700_55479800
Isoform_55153_3	chr4	+	581	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	89	-34	89	34	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	109	False	NA	NA	False	AATAAA	-10	NA	10848508	10849089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_10848500_10849100
Isoform_55156_29	chr4	-	1923	1	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	-59891	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTCAGAAAAAAAA	0	True	NA	NA	False	AATAAA	-15	NA	56947429	56945506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_56945500_56947400
Isoform_55158_8	chr4	-	1255	1	FSM	ENSMUSG00000095042.2	ENSMUST00000119266.2	1002	1	-72	-181	-72	181	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	57372026	57370771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_57370800_57372000
Isoform_55159_3	chr4	+	262	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACCTAAAATAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	57374678	57374940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_57374700_57374900
Isoform_5516_6	chr11	-	1189	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	287.687543089685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGTGTCACAGCCCTC	1616	False	NA	-21	True	AATAAA	-12	NA	59082632	59074701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_59075014_59075261_59075606_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
Isoform_55161_3	chr14	+	176	1	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAATATA	NA	False	NA	NA	False	NA	NA	NA	70998295	70998471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_70998300_70998500
Isoform_55163_12	chr4	+	210	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	224	False	NA	NA	False	NA	NA	NA	59197786	59197996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_59197800_59198000
Isoform_55164_4	chr4	-	198	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAACCAGATGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	59279195	59278997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_59279000_59279200
Isoform_55165_3	chr4	-	2695	1	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	262	-103720	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	59438371	59435676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_59435700_59438400
Isoform_55166_16	chr4	+	796	1	NIC	ENSMUSG00000028385.15	novel	7314	9	NA	NA	7	-27464	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCAAGAGTTA	-25	True	NA	NA	False	NA	NA	NA	59805846	59806642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_59805800_59806600
Isoform_55167_5	chr4	-	172	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	11015887	11015715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_11015700_11015900
Isoform_55168_5	chr4	+	2801	1	NIC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	23	-28219	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	62278986	62281787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_+_62279000_62281800
Isoform_55169_59	chr4	-	185	1	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAAAATAAAAT	NA	False	NA	-25	True	NA	NA	NA	11046160	11045975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_11046000_11046200
Isoform_55171_8	chr4	-	224	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	62398125	62397901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_62397900_62398100
Isoform_55173_3	chr4	-	195	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCCAAGCCAACAG	NA	False	NA	NA	False	NA	NA	NA	62901553	62901358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_62901400_62901600
Isoform_55174_4	chr4	-	179	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	64939935	64939756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_64939800_64939900
Isoform_55179_9	chr4	+	5173	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	66820665	66825838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_66820700_66825800
Isoform_55185_1294	chr4	-	970	1	FSM	ENSMUSG00000046341.6	ENSMUST00000120560.2	450	1	-91	-429	-91	429	mono-exon	FALSE	NA	NA	NA	NA	NA	1294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	69844407	69843437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_69843400_69844400
Isoform_55188_3	chr4	+	806	1	Genic_Genomic	ENSMUSG00000084910.2	novel	NA	NA	NA	NA	-57	-13256	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGACCCGCCGGATTT	NA	False	NA	NA	False	AATAAA	-20	NA	72119527	72120333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_72119500_72120300
Isoform_55189_3	chr4	-	1671	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-15	NA	11156320	11154649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_11154600_11156300
Isoform_55191_3	chr4	+	3884	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	78431653	78435537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_78431700_78435500
Isoform_55193_3	chr4	+	176	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTATGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	82813954	82814130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_82814000_82814100
Isoform_55194_4	chr4	-	1494	1	Genic_Genomic	ENSMUSG00000038172.15	novel	NA	NA	NA	NA	-8	-63441	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83242500	83241006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_-_83241000_83242500
Isoform_55195_7	chr4	-	1315	1	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	29	-8812	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATAGGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	83404661	83403346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_83403300_83404700
Isoform_55197_3	chr4	+	172	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83481659	83481831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_83481700_83481800
Isoform_55198_264	chr4	+	1579	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	36	3	36	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGTTTGAAATAATT	NA	False	NA	16	True	AATAAA	-16	NA	86493940	86495519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_86493900_86495500
Isoform_5520_54	chr11	-	2000	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	-8	-1	-8	1	multi-exon	FALSE	canonical	3	71	junction_4	968.523876835259	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	1947	False	NA	-1	True	AATAAA	-18	NA	59118996	59102236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
Isoform_55200_13	chr19	-	177	1	Antisense	novelGene_ENSMUSG00000024811.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAATGTTAT	NA	False	NA	NA	False	NA	NA	NA	36864825	36864648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_36864600_36864800
Isoform_55202_23	chr4	-	4174	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGTATTGCTTTTTT	NA	False	NA	-1	True	NA	NA	NA	88640702	88636528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_88636500_88640700
Isoform_55206_6	chr4	-	448	1	NIC	ENSMUSG00000044303.7	novel	895	3	NA	NA	91	-19574	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAGAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	89212799	89212351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_89212400_89212800
Isoform_55207_4	chr4	+	2927	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAAAAACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	89213119	89216046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_89213100_89216000
Isoform_55208_3	chr4	+	358	1	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTAAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	11291306	11291664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_11291300_11291700
Isoform_55209_3	chr4	-	1370	1	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-3	9764	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAACAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	91260274	91258904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_91258900_91260300
Isoform_55211_4042	chr4	-	1255	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-72	-181	-72	181	mono-exon	FALSE	NA	NA	NA	NA	NA	4042	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	91740978	91739723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_91739700_91741000
Isoform_55218_9	chr4	-	2604	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	21	564	21	-564	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTCTGAAAATTT	5530	False	NA	NA	False	AATAAA	-17	NA	94940438	94937834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94937800_94940400
Isoform_5522_1186	chr11	-	1746	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	54	0	54	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1901	False	NA	-4	True	AATAAA	-15	NA	59119042	59102239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
Isoform_55220_16	chr4	-	2504	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	21	664	21	-664	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTTTGTTTGTTTGG	5530	False	NA	1	True	AATAAA	-24	NA	94940438	94937934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_-_94937900_94940400
Isoform_55226_4	chr4	-	790	1	NIC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-12	-26864	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	98271495	98270705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr4_-_98270700_98271500
Isoform_55230_3	chr4	+	791	1	Genic_Genomic	ENSMUSG00000087332.2	novel	NA	NA	NA	NA	-20	-2741	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	99457716	99458507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr4_+_99457700_99458500
Isoform_55231_9	chr5	-	2334	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	30	4	30	-4	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTGCTATCTGCG	1504	False	NA	-13	True	AATAAA	-17	NA	3646555	3633981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
Isoform_55232_28	chr5	-	1887	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	479	2	-24	-2	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCTATCTGCGTG	1953	False	NA	-11	True	AATAAA	-19	NA	3646106	3633979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
Isoform_55234_11	chr5	-	2531	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-45	59	-45	-59	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGATTTTCTAAATGC	NA	False	NA	-7	True	AATAAA	-20	NA	3697979	3690019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_55235_18	chr5	-	1618	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-21	948	-21	381	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTTATAATTTAT	NA	False	NA	43	True	TATAAA	-12	NA	3697955	3690908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_55236_16	chr5	-	1285	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-51	1311	-51	18	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATATGCCACACTCAT	NA	False	NA	-18	True	AATAAA	-35	NA	3697985	3691271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_55238_3	chr5	-	1284	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-150	144	-22	-144	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTCTTCCTGTGATCC	NA	False	NA	NA	False	NA	NA	NA	3697956	3693220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_55239_3	chr5	-	1338	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-74	14	54	-14	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTGCGTCCATTTAAT	NA	False	NA	-22	True	NA	NA	NA	3697880	3693090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_5524_51	chr11	-	1807	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1840	False	NA	-4	True	AATAAA	-15	NA	59119103	59102239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
Isoform_55240_3	chr5	-	1439	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-151	-10	-23	10	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGCATACAATTTCAG	NA	False	NA	2	True	NA	NA	NA	3697957	3693066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
Isoform_55242_11	chr5	-	2616	15	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-184	12927	-184	-2376	5prime_fragment	TRUE	canonical	3	68	junction_9	14.488559878295	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCACAAAGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	3853109	3752926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_55243_4	chr5	-	2471	10	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-171	32147	-171	11533	5prime_fragment	FALSE	canonical	3	68	junction_4	17.1269767715535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGAATTTTTTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	3853096	3772146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_55244_6	chr5	-	1146	5	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-30979	11532	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	33.9742549587184	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGGAATTTTTTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	3783111	3772147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
Isoform_55245_6	chr5	-	1895	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	-327	1	-189	-1	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTAGTTTATAGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	3853114	3783680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
Isoform_55246_15	chr5	-	1365	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	8	3	8	0	multi-exon	FALSE	canonical	3	112	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTTATTTTGTATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	3943925	3940583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_3941898_3943874
Isoform_55247_332	chr5	-	2648	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	311	972	-14	-972	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTACTGGCTGG	NA	False	NA	-5	True	NA	NA	NA	4154435	4132116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_55248_87	chr5	-	2681	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	278	972	-47	-972	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTGTACTGGCTGG	NA	False	NA	-5	True	NA	NA	NA	4154468	4132116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_55252_38	chr5	-	3158	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	291	482	-34	-482	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTGTATTCATGA	NA	False	NA	-2	True	ATTAAA	-17	NA	4154455	4131626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_55254_17	chr5	-	2935	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	22	974	22	-974	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATGTGTACTGGCT	NA	False	NA	-7	True	NA	NA	NA	4154724	4132118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_55256_15	chr5	-	3641	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	311	-21	-14	21	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTTTGTCTTTATTA	NA	False	NA	-1	True	ATTAAA	-43	NA	4154435	4131123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
Isoform_55267_26	chr5	-	3572	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	24	1	24	-1	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTCTCTGTCCTTTTC	NA	False	NA	-4	True	ATTAAA	-16	NA	5564849	5555109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_55268_5	chr5	-	3693	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	-100	4	-15	-2	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGTCTCTGTCCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	5564973	5555112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
Isoform_55269_3	chr5	-	3641	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564847	5555110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
Isoform_55270_55	chr5	-	2932	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	37	3	12	-3	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTTCTGTTCCTA	NA	False	NA	NA	False	GATAAA	-16	NA	5609501	5587456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
Isoform_55272_10	chr5	-	2997	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTTCTGTTCCTA	NA	False	NA	NA	False	GATAAA	-16	NA	5609511	5587456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
Isoform_55273_5	chr5	-	3498	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	11	6899	11	2	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATCTTTCCCACCATTG	4784	False	NA	NA	False	AATAAA	-21	NA	5744567	5721727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
Isoform_55274_7	chr5	-	1249	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	-25	6	-25	2	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTTGTATCACAAC	NA	False	NA	NA	False	AATAAA	-20	NA	5799351	5786322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
Isoform_55275_46	chr5	-	2383	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-20	38	-6	0	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472700	8447010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_55276_20	chr5	-	2463	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-102	40	-66	-2	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCTGAGAATAAAAATG	NA	False	NA	NA	False	AATAAA	-20	NA	8472782	8447012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_55277_157	chr5	-	2408	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-8	2	-8	-2	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCTGAGAATAAAAATG	NA	False	NA	NA	False	AATAAA	-20	NA	8472724	8447012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_55279_31	chr5	-	2469	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-67	0	-67	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472783	8447010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
Isoform_55288_4	chr5	-	3606	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	69	2	69	-2	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	8672883	8540335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
Isoform_55289_76	chr5	-	2639	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	178	179	-104	-179	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAGAGCTAGCAGCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	9047146	9016211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_55290_24	chr5	-	2683	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	134	179	134	-179	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAGAGCTAGCAGCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	9047190	9016211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_55292_23	chr5	-	2860	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	142	-6	-140	6	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATGATTGTTTGCTT	NA	False	NA	-5	True	AATAAA	-36	NA	9047182	9016026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
Isoform_55295_38	chr5	-	3678	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	60	68	0	-1	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211716	9168868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_55297_3	chr5	-	3574	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	61.258640972111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAAGATTTTGAGCCA	NA	False	NA	-9	True	AATAAA	-16	NA	9211742	9168875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
Isoform_55298_42	chr5	-	3484	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	16	-2	1	-2	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211733	9168869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
Isoform_55300_3	chr5	-	3377	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	63.215469274186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211748	9168868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
Isoform_55301_57	chr5	-	3229	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-94	0	-94	0	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCTATTGACTGAATTT	NA	False	NA	-7	True	AATAAA	-21	NA	18565447	18470132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
Isoform_55304_11	chr5	-	4731	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	0	109	0	-109	multi-exon	TRUE	canonical	3	159	junction_9	38.2607155309617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087122	20963769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_55308_3	chr5	-	4570	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-5	-109	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087127	20963769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_55309_6	chr5	-	2454	8	FSM	ENSMUSG00000039987.16	ENSMUST00000140147.2	2000	8	-22	-432	-22	432	multi-exon	FALSE	canonical	3	167	junction_2	38.2152870362805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATGTGTAGTTTAAT	NA	False	NA	-16	True	NA	NA	NA	21087098	20997867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
Isoform_55311_3	chr5	-	3069	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	26	2455	26	108	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTACAAGCATTCAGAA	NA	False	NA	NA	False	AGTAAA	-16	NA	21156794	21100480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
Isoform_55314_3	chr5	-	411	2	ISM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	-86	43178	-86	-20379	5prime_fragment	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAATGTTAAAA	NA	False	NA	NA	False	AATATA	-35	NA	21260995	21234820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_21234883_21260646
Isoform_55319_4	chr5	-	3715	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	5	4	3	-4	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTACTTGAAAAGATACC	NA	False	NA	NA	False	AATAAA	-13	NA	21906389	21867904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
Isoform_5532_4	chr11	-	2854	4	FSM	ENSMUSG00000009900.8	ENSMUST00000010044.8	2761	4	-105	12	-105	-12	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAATAAGTTTGTGG	6069	False	NA	NA	False	AGTAAA	-7	NA	59181683	59138870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59140936_59147105_59147372_59165965_59166208_59181402
Isoform_55320_4	chr5	-	1716	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	0	2008	0	-2008	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTTCTACAGAGAGTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	21906394	21869908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
Isoform_55323_107	chr5	-	2064	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	66	3	0	2	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTATAGTCATCATT	NA	False	NA	0	True	AATAAA	-27	NA	21990183	21962267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
Isoform_55324_65	chr5	-	2088	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	42	3	7	2	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTATAGTCATCATT	NA	False	NA	0	True	AATAAA	-27	NA	21990207	21962267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
Isoform_5533_10	chr11	-	1954	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGAGCCGGGTCTATA	NA	False	NA	-4	True	NA	NA	NA	59340840	59297966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
Isoform_55338_24	chr5	-	1969	14	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	150.475380832502	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTAGCTGTGTTCTTT	NA	False	NA	-10	True	AATAAA	-11	NA	22755336	22691489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
Isoform_5534_5	chr11	-	2023	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-7	1	combination_of_known_junctions	TRUE	canonical	3	5	junction_5	134.676798298742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	-6	True	NA	NA	NA	59340840	59297968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333739_59340740
Isoform_55340_492	chr5	-	2054	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	46	3	-25	-3	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTAGCTGTGTTCTTT	NA	False	NA	-10	True	AATAAA	-11	NA	22755327	22691489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
Isoform_55341_94	chr5	-	2064	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	150.386877811036	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755336	22691486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753013_22755189
Isoform_55343_8	chr5	-	2167	13	FSM	ENSMUSG00000029012.12	ENSMUST00000135906.8	2117	13	-52	2	19	-2	multi-exon	TRUE	canonical	3	527	junction_9	41.555434863164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTTCTTTGGTTC	NA	False	NA	-5	True	AATAAA	-16	NA	22755354	22691484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
Isoform_55345_7	chr5	-	1976	13	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	163.420788661255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755359	22691486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_22692216_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
Isoform_55346_6	chr5	-	3595	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	22	-690	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23880990	23711139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_55347_4	chr5	-	3564	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-21	-690	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23880986	23711139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_5535_166	chr11	-	1900	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-15	11	-7	-1	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAGAGGAGCCGGGTC	NA	False	NA	-8	True	NA	NA	NA	59340840	59297970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
Isoform_55352_7	chr5	-	972	10	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-7	-1059	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	98.3694221284061	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	23880972	23731787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
Isoform_55353_49	chr5	-	931	9	NIC	ENSMUSG00000062604.12	novel	946	9	NA	NA	17	-1059	combination_of_known_junctions	FALSE	canonical	3	183	junction_1	32.7945784391262	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	23880995	23731787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_55354_17	chr5	-	884	9	NNC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-10	-1059	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	68.162375068655	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCACATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	23880975	23731787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
Isoform_55356_51	chr5	-	2336	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	10	1061	10	656	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAGCTTAAATACTTTG	NA	False	NA	-1	True	AGTAAA	-27	NA	23988699	23946706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
Isoform_55358_82	chr5	-	3372	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	35	0	35	0	multi-exon	TRUE	canonical	3	301	junction_13	29.1369181623589	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988674	23945645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
Isoform_55361_37	chr5	-	3401	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	5	1	5	0	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988704	23945646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
Isoform_55364_716	chr5	-	390	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	26	709	26	-709	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGCCTTTCATACTT	NA	False	NA	-30	True	AATAAA	-17	NA	24049133	24044650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24044827_24046707_24046757_24048968
Isoform_55367_4	chr5	-	4315	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	-87	-7	-87	7	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTATCTCATGTTTA	NA	False	NA	1	True	NA	NA	NA	24556689	24524579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
Isoform_55368_6	chr5	-	1996	9	NIC	ENSMUSG00000038295.15	novel	1837	10	NA	NA	95	-179	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	7.95986023746648	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9389	False	NA	NA	False	ATTAAA	-14	NA	24592869	24589357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592654
Isoform_55369_16	chr5	-	1999	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4237	179	60	-179	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9354	False	NA	NA	False	ATTAAA	-14	NA	24592904	24589357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
Isoform_55370_3	chr5	-	2094	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4143	178	-34	-178	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTCAATCATTGTAAC	9260	False	NA	NA	False	ATTAAA	-15	NA	24592998	24589356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
Isoform_55372_8	chr5	-	2107	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-54	-6	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTCTGGGAAGCCAAC	NA	False	NA	-17	True	NA	NA	NA	24628582	24623244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_55373_33	chr5	-	1169	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-54	191	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628582	24624182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_55375_5	chr5	-	1238	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-16	189	intron_retention	FALSE	non_canonical	2	111	junction_3	24.5277393984851	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGATGATATGGTGGT	NA	False	NA	-11	True	CATAAA	-16	NA	24628544	24624184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_55377_110	chr5	-	2550	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	3	-1	2	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650182	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55378_32	chr5	-	2643	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-90	-1	10	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650275	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_5538_3	chr11	-	1964	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	136.373604484152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGGAGCCGGGTCTAT	NA	False	NA	-5	True	NA	NA	NA	59340848	59297967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59333617_59333668_59340740
Isoform_55381_423	chr5	-	1787	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	105	1	4	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650180	24646037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_55382_112	chr5	-	1877	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	16	0	16	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650269	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_55383_21	chr5	-	1890	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650192	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
Isoform_55387_35	chr5	-	2565	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	73	junction_5	391.881678571479	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650180	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55388_17	chr5	-	2618	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	73	junction_5	391.881678571479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650233	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55389_28	chr5	-	1807	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_5	369.485762100601	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650182	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
Isoform_5539_18	chr11	-	1913	5	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-15	1	combination_of_known_splicesites	TRUE	canonical	3	14	junction_4	118.239957290249	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAGGAGCCGGGTCTA	NA	False	NA	-6	True	NA	NA	NA	59340848	59297968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59340740
Isoform_55391_70	chr5	-	2649	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55392_31	chr5	-	2692	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650227	24646037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55396_27	chr5	-	2628	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	123.84074697871	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650192	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55397_16	chr5	-	2651	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-12	1	intron_retention	FALSE	canonical	3	1095	junction_1	123.84074697871	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650218	24646039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_55404_19	chr5	-	2715	7	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	1095	junction_1	132.996762700785	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650181	24646036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
Isoform_5541_5	chr11	-	2813	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	0	599	0	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59363300	59352621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
Isoform_55415_11	chr5	-	1284	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	44	5	-19	3	multi-exon	FALSE	canonical	3	68	junction_2	11	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGTCTGTGTGTTG	NA	False	NA	-1	True	ATTAAA	-21	NA	24652808	24650460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24651272_24651531_24651951_24652754
Isoform_55425_3092	chr5	-	2502	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	69	-2	69	2	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	3092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782396	24770340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
Isoform_55426_149	chr5	-	2527	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	42	0	42	0	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782423	24770342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
Isoform_5543_16	chr11	-	3622	10	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-31	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	43.6750062717741	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397077	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
Isoform_55440_140	chr5	-	1435	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3277	0	203	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	0	True	ATTAAA	-17	NA	24803733	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
Isoform_55442_36	chr5	-	1645	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3067	0	-7	0	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	0	True	ATTAAA	-17	NA	24803943	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
Isoform_55444_3	chr5	-	1738	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	3147	-173	73	173	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAGTGGCAAGCC	NA	False	NA	NA	False	AAAACA	-41	NA	24803863	24797446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
Isoform_55445_19	chr5	-	1803	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-68	0	-68	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6917	False	NA	0	True	ATTAAA	-17	NA	24807078	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_55446_9	chr5	-	1911	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-176	0	-176	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6809	False	NA	0	True	ATTAAA	-17	NA	24807186	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_55447_7	chr5	-	1983	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-251	3	-251	-3	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCCTTGTGGTCATT	6734	False	NA	-3	True	ATTAAA	-14	NA	24807261	24797622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_55448_31	chr5	-	1712	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	23	0	-13	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	7008	False	NA	0	True	ATTAAA	-17	NA	24806987	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
Isoform_5545_136	chr11	-	3653	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	409	2	-15	-2	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397061	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_55450_6	chr5	-	1709	14	FSM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	3	0	3	0	multi-exon	FALSE	canonical	3	4	junction_12	70.4408770513493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	645	False	NA	0	True	ATTAAA	-17	NA	24829406	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
Isoform_55451_3	chr5	-	2421	7	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	210	0	intron_retention	FALSE	canonical	3	187	junction_2	15.9626299698877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	NA	False	NA	0	True	ATTAAA	-17	NA	24803726	24797619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24798117_24798222_24799018_24799829_24799992_24800140_24800243_24800387_24801073_24801804_24801848_24803589
Isoform_55452_5	chr5	-	1757	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	75	532	28	-1	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGTTGTCTTTGGTTTT	NA	False	NA	-6	True	AATACA	-13	NA	24935650	24917267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
Isoform_55453_3	chr5	-	2284	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	77	3	30	-3	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGCCAGGATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	24935648	24916738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
Isoform_55454_4	chr5	-	355	2	NNC	ENSMUSG00000038135.5	novel	221	2	NA	NA	-748	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTGGCGGGCCTCGGA	NA	False	NA	NA	False	AATAAA	-14	NA	24957070	24956001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_24956188_24956901
Isoform_55456_456	chr5	-	1131	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	227	426	31	418	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGAGCTACTTGGTG	NA	False	NA	-9	True	AATAAA	-17	NA	25047395	25008246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
Isoform_55457_159	chr5	-	1352	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	6	426	6	418	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGAGCTACTTGGTG	NA	False	NA	-9	True	AATAAA	-17	NA	25047616	25008246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
Isoform_55461_36	chr5	-	2187	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	19	-1	0	1	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	-8	True	AATAAA	-20	NA	25113448	25067744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
Isoform_55462_12	chr5	-	2212	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	-5	-2	-5	2	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTATGTATATGAGT	NA	False	NA	-7	True	AATAAA	-21	NA	25113472	25067743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
Isoform_55465_3	chr5	-	3480	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	-153	4	-153	0	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	-9	True	AATAAA	-19	NA	25305793	25067745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
Isoform_55466_3	chr5	-	2935	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	388	8	388	-4	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTAAAGTTTTTATGTAT	NA	False	NA	-13	True	AATAAA	-15	NA	25305252	25067749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
Isoform_55467_17	chr5	-	2217	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87276	-1	-8	1	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	-8	True	AATAAA	-20	NA	25113475	25067744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
Isoform_55468_4	chr5	-	2717	14	NNC	ENSMUSG00000038056.16	novel	5301	34	NA	NA	-5	32	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	4.46153846153846	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTTCTCCTGGT	9411	False	NA	NA	False	NA	NA	NA	25703786	25577801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387
Isoform_55469_20	chr5	-	3226	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	16	5	16	-5	multi-exon	FALSE	canonical	3	77	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCTATATTTCATA	NA	False	NA	-17	True	AATACA	-6	NA	25910807	25894814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_25897827_25903248_25903331_25910675
Isoform_5547_11	chr11	-	3371	10	FSM	ENSMUSG00000020472.15	ENSMUST00000101150.9	3771	10	398	2	-26	-2	multi-exon	FALSE	canonical	2	12	junction_6	45.5777723603659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397072	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_55470_5	chr5	-	2787	11	ISM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	135	18849	-20	803	5prime_fragment	FALSE	canonical	3	600	junction_4	48.4730853154614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTTTGCCTCTATT	NA	False	NA	NA	False	NA	NA	NA	27996413	27963926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_55471_3	chr5	-	2466	10	ISM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	135	19651	-20	1	5prime_fragment	FALSE	canonical	3	600	junction_3	51.0881590977792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCAACATAGTGACCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	27996413	27964728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
Isoform_55472_15	chr5	-	1895	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	92	-3	92	3	multi-exon	FALSE	canonical	3	175	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACTTGCATGAATAAC	NA	False	NA	-3	True	ATTAAA	-20	NA	28414928	28407443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_28408435_28412284_28412382_28414121
Isoform_55473_7	chr5	-	3554	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	51	-1621	51	-9	multi-exon	FALSE	canonical	3	175	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTAAGAGACCAGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	28414969	28405825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_28408435_28412284_28412382_28414121
Isoform_55474_8	chr5	-	2709	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	92	-817	92	-813	multi-exon	FALSE	canonical	3	175	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTCTCTGCCTGT	NA	False	NA	-1	True	ATTAAA	-28	NA	28414928	28406629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_28408435_28412284_28412382_28414121
Isoform_55478_4	chr5	-	2758	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-4	2172	2	145	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGAATTTAGTTTCT	NA	False	NA	0	True	AGTAAA	-15	NA	29583386	29436971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
Isoform_55479_4	chr5	-	2612	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-2	2316	-2	1	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	29583384	29437115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
Isoform_5548_6	chr11	-	1801	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-47	-806	-44	0	multi-exon	FALSE	canonical	3	85	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	-13	True	AATAAA	-16	NA	59678515	59674722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59676052_59678043
Isoform_55480_5	chr5	-	2120	3	FSM	ENSMUSG00000001566.10	ENSMUST00000165512.4	2245	3	-166	291	-166	-64	multi-exon	FALSE	canonical	2	3	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATGCTAAATTATTAT	NA	False	NA	NA	False	TATAAA	-17	NA	29683634	29678322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_29679230_29679753_29679915_29682582
Isoform_55481_5	chr5	-	2196	3	FSM	ENSMUSG00000001566.10	ENSMUST00000165512.4	2245	3	-165	214	-165	13	multi-exon	FALSE	canonical	2	3	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTGAGGGGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	29683633	29678245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_29679230_29679753_29679915_29682582
Isoform_55482_5	chr5	-	894	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-3	67	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	669.869058514838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTTCAGTGATGCTA	NA	False	NA	-22	True	ATTAAA	-18	NA	30278618	30265994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273537_30276631_30276706_30278358
Isoform_55483_28	chr5	-	2578	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	2	583	-1	-583	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGCTATTCTATCTC	NA	False	NA	-2	True	NA	NA	NA	30278613	30264407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_55484_5	chr5	-	3804	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-13	-628	-13	3	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30278628	30263196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_55486_344	chr5	-	995	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	19	2149	-12	88	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATCACCGTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-39	NA	30278596	30265973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_55487_50	chr5	-	1153	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	19	1991	-12	246	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAATGGGCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30278596	30265815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_55488_5	chr5	-	996	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	4	67	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTTCAGTGATGCTA	NA	False	NA	-22	True	ATTAAA	-18	NA	30278608	30265994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
Isoform_55489_9	chr5	-	2050	2	ISM	ENSMUSG00000025747.13	ENSMUST00000138520.2	663	4	-96	2025	-1	-2025	5prime_fragment	FALSE	canonical	3	1874	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30278616	30274913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_30276706_30278358
Isoform_55494_544	chr5	-	2714	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	182	1121	-4	1	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCTGTTTTCTTCTG	NA	False	NA	-2	True	AATAAA	-24	NA	30359978	30324422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_55495_198	chr5	-	2745	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	149	1123	-23	-1	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	30360011	30324424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_55496_27	chr5	-	2878	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	17	1122	17	0	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30360143	30324423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
Isoform_5550_9	chr11	-	3237	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-23	38	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700865	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
Isoform_55502_4	chr5	-	1729	6	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	7299	1	-2005	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	2.60768096208106	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGAGGTCATTTACTA	4665	False	NA	NA	False	AATAAA	-19	NA	30403421	30398429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_30398560_30400040_30400097_30400494_30400558_30400647_30400690_30401236_30402614_30403360
Isoform_55504_20	chr5	-	558	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	12	6	12	-6	multi-exon	FALSE	canonical	3	1088	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATATATTTTTTTGTGGT	NA	False	NA	-11	True	NA	NA	NA	31065057	31063867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31064111_31064742
Isoform_55505_13	chr5	-	510	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	1	633	1	0	multi-exon	FALSE	canonical	3	823	junction_2	132.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065131	31063861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31064111_31064742_31064881_31065008
Isoform_55506_115	chr5	-	438	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	71	635	8	-2	multi-exon	FALSE	canonical	3	823	junction_2	132.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGTGGTCCCA	NA	False	NA	-7	True	NA	NA	NA	31065061	31063863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31064111_31064742_31064881_31065008
Isoform_55507_30	chr5	-	1424	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	16	2	16	-2	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCATGTGTCCTTGGTCC	5312	False	NA	-1	True	AATAAA	-23	NA	31102919	31090488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
Isoform_55509_3	chr5	-	1456	6	NNC	ENSMUSG00000029161.9	novel	1442	6	NA	NA	61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.15204895091804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCCTTGGTCCAGC	5357	False	NA	2	True	AATAAA	-26	NA	31102874	31090485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31091333_31091503_31091678_31091700_31091794_31091886_31091953_31093221_31093325_31102701
Isoform_5551_26	chr11	-	3004	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-97	36	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700634	59682579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
Isoform_55511_241	chr5	-	2012	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	99	4189	0	1	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117606	31112385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
Isoform_55513_24	chr5	-	2335	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117644	31112386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
Isoform_55514_37	chr5	-	2298	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117606	31112385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
Isoform_55515_6	chr5	-	2453	7	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-1	1	intron_retention	TRUE	canonical	3	239	junction_4	21.0666930379582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117597	31112385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31116757_31117314
Isoform_55517_98	chr5	-	3080	18	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	32.3827670006119	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	810	False	NA	-2	True	AATAAA	-18	NA	31205346	31193380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205143_31205309
Isoform_55518_12	chr5	-	2622	18	NIC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	-31	353	combination_of_known_junctions	FALSE	canonical	3	63	junction_17	22.1293773649543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTGGCATTTGATTAA	772	False	NA	NA	False	AATAAA	-15	NA	31205384	31193877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
Isoform_55519_15	chr5	-	3099	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	337	0	-146	0	multi-exon	TRUE	canonical	3	19	junction_17	28.8754634169437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	587	False	NA	-1	True	AATAAA	-19	NA	31205569	31193379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
Isoform_55520_5	chr5	-	3436	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	28.8754634169437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	250	False	NA	-1	True	AATAAA	-19	NA	31205906	31193379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
Isoform_55521_7	chr5	-	3220	18	NNC	ENSMUSG00000006641.13	novel	3218	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	32.3827670006119	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGGCCTCTGTGTTC	NA	False	NA	-3	True	AATAAA	-17	NA	31206273	31193381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205143_31206095
Isoform_55522_31	chr5	-	2007	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	82	0	-64	0	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCAGTCCAATTCCTC	3826	False	NA	0	True	AATAAA	-19	NA	31250877	31243449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
Isoform_55528_8	chr5	-	1698	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	10	16	10	-7	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31311585	31298013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
Isoform_5553_475	chr11	-	2872	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	221	344	-84	38	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700621	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_55533_5	chr5	-	3885	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-12	-292	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337500	31314156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
Isoform_55534_46	chr5	-	3636	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	-292	combination_of_known_junctions	TRUE	canonical	3	165	junction_17	146.210507369935	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337251	31314156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
Isoform_55536_6	chr5	-	3488	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-12	234	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGAGTGGGTGTTTG	NA	False	NA	-2	True	AGTAAA	-22	NA	31337500	31314553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
Isoform_55539_4	chr5	-	3324	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	25	232	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	147.57426462716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337228	31314555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
Isoform_5554_104	chr11	-	3116	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-23	344	-23	38	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700865	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_55540_14	chr5	-	3744	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	0	808	0	-292	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337488	31314156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_55541_117	chr5	-	3509	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	235	808	0	-292	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337253	31314156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_55545_4	chr5	-	3685	18	FSM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	225	808	2	-292	multi-exon	FALSE	canonical	3	356	junction_17	85.762849975885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337251	31314156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
Isoform_55549_16	chr5	-	1989	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	-22	-1	-22	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350380	31344910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
Isoform_5555_18	chr11	-	3213	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	225	-1	-80	1	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAGGTTGGTACCAGG	NA	False	NA	NA	False	NA	NA	NA	59700617	59682232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_55552_186	chr5	-	1698	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	318	9	27	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350456	31344910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
Isoform_55555_10	chr5	-	1767	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	103	8	-22	0	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350380	31344910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
Isoform_55557_4	chr5	-	1911	5	NIC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	81.704880515181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTCTCTGCTGAAT	NA	False	NA	-19	True	AATAAA	-14	NA	31359600	31356326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31357492_31357578_31357728_31357995_31358167_31358926_31359083_31359330
Isoform_55558_8	chr5	-	2132	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	83	-2	83	0	multi-exon	FALSE	canonical	3	184	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359303	31356324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31357492_31357578_31358167_31358926
Isoform_55559_10	chr5	-	3753	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	49	-1574	-29	1574	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	31359598	31354750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_55560_155	chr5	-	2167	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	59	2	-19	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTCTCTGCTGAAT	NA	False	NA	-19	True	AATAAA	-14	NA	31359588	31356326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_55561_36	chr5	-	2225	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	3	0	3	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359644	31356324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
Isoform_55563_1572	chr5	-	2209	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	97	1	-25	-1	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGCTCATAGTGTCCTG	NA	False	NA	-6	True	ACTAAA	-17	NA	31377934	31360012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
Isoform_55564_126	chr5	-	2267	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	39	1	39	-1	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGCTCATAGTGTCCTG	NA	False	NA	-6	True	ACTAAA	-17	NA	31377992	31360012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
Isoform_55567_9	chr5	-	5361	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	42	0	-26	0	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCATTCTTTGCTCAA	NA	False	NA	1	True	ATTAAA	-20	NA	31448409	31410620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
Isoform_55568_4	chr5	-	5444	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	-45	4	-36	-1	multi-exon	FALSE	canonical	3	41	junction_37	14.3941162971073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCATTCTTTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	31448496	31410624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
Isoform_55569_7	chr5	-	1426	8	FSM	ENSMUSG00000038552.15	ENSMUST00000041266.11	1375	8	-49	-2	16	2	multi-exon	FALSE	canonical	2	3	junction_1	7.19977323905952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGGTTCCTGTATGG	NA	False	NA	NA	False	AATAAA	-19	NA	31453264	31450227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31450509_31450757_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
Isoform_55570_7	chr5	-	2320	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	1	12	1	-12	multi-exon	FALSE	canonical	3	9	junction_5	5.32290647422377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTATAATTTGAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	31453279	31449597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
Isoform_55572_17	chr5	-	1296	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1201	1	intron_retention	FALSE	canonical	3	124	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTTATGTCTTTT	721	False	NA	-1	True	NA	NA	NA	31646493	31643975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31645206_31646427
Isoform_55573_3	chr5	-	379	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1224	-939	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTGTTTCTTTTTACAC	698	False	NA	NA	False	NA	NA	NA	31646516	31644915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31645206_31646427
Isoform_55574_65	chr5	-	2649	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	31	13	-6	-7	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCATCTGAGTTATTC	NA	False	NA	-8	True	AATAAA	-12	NA	31684086	31671920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
Isoform_55576_9	chr5	-	1019	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	12	11	12	-11	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAATGCACATGGGTGT	NA	False	NA	-42	True	AATAAA	-12	NA	31854959	31781793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
Isoform_55577_64	chr5	-	2138	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	20	25	0	-4	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	32942970	32893669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
Isoform_5558_24	chr11	-	2865	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	94	36	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700656	59682579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
Isoform_55586_7	chr5	-	4055	5	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-7	7320	combination_of_known_splicesites	FALSE	canonical	3	86	junction_4	14.456832294801	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAAAGCTTATGTCA	7064	False	NA	NA	False	NA	NA	NA	33011589	32985641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
Isoform_55589_405	chr5	-	2467	10	FSM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	0	-31	0	0	multi-exon	FALSE	canonical	3	226	junction_1	199.225041809384	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_5559_12	chr11	-	3074	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-21	38	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700863	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
Isoform_55594_57	chr5	-	2274	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	298.867759218019	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
Isoform_55597_1410	chr5	-	2470	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
Isoform_55604_215	chr5	-	2276	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	2	1	0	-1	multi-exon	FALSE	canonical	3	123	junction_8	242.929741643546	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432336	33405067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
Isoform_5561_45	chr11	-	2882	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-99	38	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	78.4245479567605	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700636	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695351_59695618_59698625_59698742_59700485
Isoform_55613_42	chr5	-	2125	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	-11	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_55614_14	chr5	-	2146	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	-33	-1	1	1	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTCTGCCTAGATTCTT	NA	False	NA	-11	True	ATTAAA	-15	NA	33786965	33757698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_55616_40	chr5	-	1991	6	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	70.7937850379537	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786963	33757696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786192_33786322_33786680
Isoform_55617_24	chr5	-	2345	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	4	-3	4	3	multi-exon	FALSE	canonical	3	127	junction_2	24.5089269450949	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786962	33757696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
Isoform_55618_257	chr5	-	1967	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	36	6	0	3	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786943	33757696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_55619_109	chr5	-	2007	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	-2	4	-2	-4	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTAGATTCTTTTTG	NA	False	NA	-7	True	ATTAAA	-19	NA	33786981	33757694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_55624_17	chr5	-	1842	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	70.1248885917119	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786943	33757696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786680
Isoform_55625_7	chr5	-	1910	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	81.3956387038028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786942	33757697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33758225_33764807_33765572_33771946_33772179_33786196_33786322_33786680
Isoform_55627_21	chr5	-	1203	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	76.423164027669	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786943	33757696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33758225_33767775_33767831_33771946_33772179_33786196_33786322_33786680
Isoform_55628_6	chr5	-	1147	4	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	88.8231701503361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33758225_33771946_33772179_33786196_33786322_33786680
Isoform_5563_9	chr11	-	3086	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	2	38	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	78.4245479567605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCGACTACATGTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	59700840	59682577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695351_59695618_59698625_59698742_59700485
Isoform_55630_244	chr5	-	1651	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	254	1	-14	-1	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCCTATACTGTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	33809664	33797399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_55631_9	chr5	-	1930	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	-31	7	-31	-7	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAACATTGCCCTATAC	NA	False	NA	-11	True	AATAAA	-15	NA	33809949	33797405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_55632_117	chr5	-	1670	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	229	7	0	-7	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAACATTGCCCTATAC	NA	False	NA	-11	True	AATAAA	-15	NA	33809689	33797405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
Isoform_55633_20	chr5	-	1540	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-14	-7	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	419.837270062263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAACATTGCCCTATAC	NA	False	NA	-11	True	AATAAA	-15	NA	33809664	33797405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33809306_33809424_33809538
Isoform_55634_5	chr5	-	1618	7	FSM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	-45	5	2	-5	multi-exon	FALSE	canonical	2	22	junction_4	432.7992863005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACATTGCCCTATACTG	NA	False	NA	-9	True	AATAAA	-17	NA	33809695	33797403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33807086_33807192_33809306_33809424_33809538
Isoform_55637_10	chr5	-	2671	4	NIC	ENSMUSG00000019295.9	novel	2369	4	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	28.5773803324704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTACTTCATTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	33815257	33810564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33811959_33812056_33812217_33812666_33813142_33814615
Isoform_55638_12	chr5	-	2397	4	FSM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-28	0	-28	0	multi-exon	FALSE	canonical	1	1	junction_3	31.3793987620328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTACTTCATTTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	33815271	33810562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814905
Isoform_55639_122	chr5	-	2331	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	497	0	-20	0	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTCATTTTGTTTAAC	NA	False	NA	1	True	AATAAA	-19	NA	33815263	33810559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
Isoform_55640_5	chr5	-	2828	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	-5	5	-5	-2	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTACTTCATTTTGT	NA	False	NA	-4	True	AATAAA	-14	NA	33815765	33810564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
Isoform_55644_439	chr5	-	2527	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	100	2645	-3	216	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTTTTAATTTTCATC	NA	False	NA	NA	False	AATAAA	-20	NA	33940061	33899661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
Isoform_55645_16	chr5	-	2617	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	10	2645	10	216	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTTTTAATTTTCATC	NA	False	NA	NA	False	AATAAA	-20	NA	33940151	33899661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
Isoform_55653_9	chr5	-	2411	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	164	5	1	-5	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGATTTTCCACTTTAA	NA	False	NA	-5	True	AATAAA	-24	NA	34093593	34055264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
Isoform_55659_11	chr5	-	2940	4	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	77	2	-2	-2	intron_retention	FALSE	canonical	3	453	junction_3	32.3144274623924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTGTGTTTTTGTTT	9403	False	NA	-2	True	NA	NA	NA	34326794	34311225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748
Isoform_55660_157	chr5	-	1984	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	69	20	-6	-20	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGGAATATTTACTATG	9395	False	NA	-20	True	AATAAA	-31	NA	34326802	34311243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
Isoform_55661_3	chr5	-	2073	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTGTGTTTTTGTTT	10009	False	NA	-2	True	NA	NA	NA	34326873	34311225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
Isoform_55664_4	chr5	-	1110	6	FSM	ENSMUSG00000037235.14	ENSMUST00000042701.13	3872	6	-22	2784	-12	-92	multi-exon	FALSE	canonical	1	1	junction_1	2.57681974534503	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGGCAGGATCCGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	34345076	34334014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34334494_34334941_34335105_34336153_34336269_34341657_34341688_34344672_34344773_34344853
Isoform_55665_10	chr5	-	4090	13	FSM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-110	3	1	-3	multi-exon	FALSE	canonical	2	8	junction_2	9.95685135416256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACGCTCTGGCGTCTTC	NA	False	NA	-5	True	CATAAA	-15	NA	34445780	34352239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_55667_94	chr5	-	2000	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-4	-9	-4	9	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCTGGAATGTGTGCA	NA	False	NA	-1	True	AATAAA	-28	NA	34671339	34653421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_55668_4	chr5	-	2856	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	1	-870	1	870	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAAAATACAA	NA	False	NA	NA	False	AATAAA	-16	NA	34671334	34652560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_55669_12	chr5	-	2177	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGAGAGCTGGGCTG	NA	False	NA	-12	True	AATAAA	-17	NA	34671339	34653432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
Isoform_5567_19	chr11	-	3189	13	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-92	36	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	67.9384934252217	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700629	59682579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
Isoform_55670_6	chr5	-	3673	2	FSM	ENSMUSG00000059866.14	ENSMUST00000159102.2	584	2	-330	-2759	1	645	multi-exon	FALSE	canonical	3	117	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	NA	False	NA	NA	False	NA	NA	NA	34671334	34657870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34661172_34670962
Isoform_55675_162	chr5	-	1848	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	53	6	4	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794480	34790991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_55676_38	chr5	-	1870	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	31	6	-18	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794502	34790991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_55678_12	chr5	-	1720	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	34	0	11	0	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794522	34790989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
Isoform_55679_74	chr5	-	1869	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	38	-1	-14	0	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794498	34790991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
Isoform_55681_10	chr5	-	1721	13	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_12	101.567164422804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794522	34790991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
Isoform_55682_5	chr5	-	1927	13	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	108.08185555402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794515	34790989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794170_34794270
Isoform_55683_14	chr5	-	2024	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-18	1	intron_retention	FALSE	canonical	3	174	junction_11	68.0427672998254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794502	34790988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_55685_4	chr5	-	2236	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	10	-1	intron_retention	FALSE	canonical	3	174	junction_10	71.3145146516472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGTCTTACTATTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	34794459	34790986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_55686_4	chr5	-	2471	10	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	174	junction_9	75.0931931290779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794489	34790991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792876_34792952_34793469_34793753_34793851_34793937_34794128_34794270
Isoform_55688_120	chr5	-	2651	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	51	0	51	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34817441	34795879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
Isoform_55701_504	chr5	-	2904	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	67	10	-3	-10	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTCTTTCTGGGGAAA	NA	False	NA	-17	True	AATAAA	-11	NA	35263043	35248854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_55702_1088	chr5	-	1436	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	67	1478	-3	90	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGAGTCCTTGCCTGG	NA	False	NA	-8	True	AATACA	-15	NA	35263043	35250322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_55703_23	chr5	-	2966	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	5	10	5	-10	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTCTTTCTGGGGAAA	NA	False	NA	-17	True	AATAAA	-11	NA	35263105	35248854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_55705_39	chr5	-	1498	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	5	1478	5	90	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGAGTCCTTGCCTGG	NA	False	NA	-8	True	AATACA	-15	NA	35263105	35250322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
Isoform_5571_451	chr11	-	1585	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	51	10	25	-10	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTGAATGTTAATGTG	NA	False	NA	-14	True	ATTAAA	-17	NA	59730613	59708630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
Isoform_55710_29	chr5	-	3778	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	13	-1	-6	1	multi-exon	FALSE	canonical	3	72	junction_3	7.3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATAGAAATATTTATA	7639	False	NA	NA	False	TATAAA	-22	NA	35732401	35713545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
Isoform_55711_64	chr5	-	2787	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1003	0	-1003	multi-exon	FALSE	canonical	3	72	junction_3	7.3	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCTTCACAGCATC	7626	False	NA	-3	True	AATAAA	-18	NA	35732414	35714549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
Isoform_55714_8	chr5	-	2745	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-6	-1003	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCTTCACAGCATC	7639	False	NA	-3	True	AATAAA	-18	NA	35732401	35714549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
Isoform_55716_17	chr5	-	4303	18	FSM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	244	2	-20	-1	multi-exon	FALSE	canonical	3	19	junction_17	20.7093914138867	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTATCTTCTAGGTG	NA	False	NA	-7	True	AGTAAA	-13	NA	35886376	35854525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
Isoform_55717_40	chr5	-	4309	18	FSM	ENSMUSG00000036553.17	ENSMUST00000201511.2	4246	18	-60	-3	-60	0	multi-exon	FALSE	canonical	3	51	junction_17	16.3400287573917	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATCTTCTAGGTGTG	NA	False	NA	-5	True	AGTAAA	-15	NA	35897391	35854523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
Isoform_55718_4	chr5	-	4217	17	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	23.5478236786332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897377	35854526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35897301
Isoform_55719_5	chr5	-	3840	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	43	1	-32	-1	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTGTGTACTTTG	8827	False	NA	-2	True	AATAAA	-20	NA	36687924	36647949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
Isoform_5572_98	chr11	-	1640	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	3	3	3	-3	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTAATGTGTGTTCTC	NA	False	NA	-7	True	ATTAAA	-24	NA	59730661	59708623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
Isoform_55720_3	chr5	-	4585	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	3	2	3	-1	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTGTGTACTTTG	8928	False	NA	-2	True	AATAAA	-20	NA	36739738	36647949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
Isoform_55721_5	chr5	-	6697	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-25	5	-1	-5	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTGTTGTTTTTA	NA	False	NA	40	True	AATAAA	-8	NA	36853306	36757833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
Isoform_55722_3	chr5	-	1941	2	FSM	ENSMUSG00000029190.20	ENSMUST00000140653.2	2014	2	70	3	7	-3	multi-exon	FALSE	canonical	2	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATTTGTATTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	36853298	36828745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36830587_36853198
Isoform_55723_1064	chr5	-	1556	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	42	50	42	-50	multi-exon	FALSE	canonical	3	1678	junction_1	0	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCAGCCCGGAGAGTT	NA	False	NA	-9	True	AATAAA	-18	NA	36954074	36952260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36953289_36953546
Isoform_55734_5	chr5	-	1577	8	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	15973	-15	-1717	15	3prime_fragment	FALSE	canonical	3	157	junction_7	33.0448056988306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACCTCTCTTTTCACCT	NA	False	NA	2	True	AATAAA	-36	NA	36972024	36964249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672
Isoform_55735_120	chr5	-	3321	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	22	-13	22	13	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGACCTCTCTTTTCAC	971	False	NA	0	True	AATAAA	-34	NA	36987975	36964251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
Isoform_55739_22	chr5	-	3648	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	22	-340	22	340	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAATCTGGCCT	971	False	NA	-10	True	AATACA	-26	NA	36987975	36963924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
Isoform_55743_113	chr5	-	3541	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	244	2	-28	1	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37146305	37123449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
Isoform_55745_3	chr5	-	4325	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	-42	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16977917211909	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTTCTTGCCTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37494280	37456517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
Isoform_55746_3	chr5	-	3276	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	-16	242	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16977917211909	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTTTGGTCCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	37494254	37457540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
Isoform_55747_10	chr5	-	1926	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	1	8	0	-8	multi-exon	FALSE	canonical	2	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGATGTCTGTGGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	37981926	37977836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_37979045_37981208
Isoform_55749_3	chr5	-	1676	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	438	467	4	-467	multi-exon	TRUE	canonical	3	5	junction_1	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGATTGTTTTCTTCC	NA	False	NA	42	True	ATTAAA	-12	NA	38316813	38295002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
Isoform_55750_36	chr5	-	2783	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	24	171	-2	-2	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377777	38357594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
Isoform_55751_3	chr5	-	2739	7	FSM	ENSMUSG00000029127.16	ENSMUST00000126267.8	2721	7	-23	5	-5	-2	multi-exon	FALSE	canonical	2	5	junction_4	14.1391890385081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377780	38357594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
Isoform_55752_3	chr5	-	1658	6	FSM	ENSMUSG00000029127.16	ENSMUST00000143436.8	1654	6	-6	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_4	15.2918278828922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377775	38357594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38373790_38373958_38377666
Isoform_55753_3	chr5	-	2177	2	FSM	ENSMUSG00000029127.16	ENSMUST00000137577.3	1337	2	-26	-814	4	814	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCCAAAAAAACTAAAATA	NA	False	NA	NA	False	NA	NA	NA	38377794	38371908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38373958_38377666
Isoform_55754_7	chr5	-	2868	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	82	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATTGGCAGTTTCTTTG	NA	False	NA	41	True	ATTAAA	-16	NA	38719067	38684295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694480_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55755_4	chr5	-	2955	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATCACTGGCTCTATGT	NA	False	NA	-5	True	ATTAAA	-18	NA	38719013	38684153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692685_38694482_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55756_3	chr5	-	3089	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692685_38694482_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55757_5	chr5	-	2948	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-1	-141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGATTGGCAGTTTCTTT	NA	False	NA	40	True	ATTAAA	-15	NA	38719150	38684296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692683_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55758_5	chr5	-	2796	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-18	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATTGGCAGTTTCTTTG	NA	False	NA	41	True	ATTAAA	-16	NA	38718996	38684295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55759_3	chr5	-	3002	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719063	38684155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692683_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
Isoform_55761_4	chr5	-	6808	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-2	-2	-2	0	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842095	38825826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
Isoform_55766_10	chr5	-	6767	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	49	0	-20	0	multi-exon	FALSE	canonical	3	222	junction_2	31	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842120	38825826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38832197_38839827_38840126_38842021
Isoform_55767_4	chr5	-	880	7	FSM	ENSMUSG00000029128.13	ENSMUST00000202913.2	863	7	-21	4	-21	-4	multi-exon	FALSE	canonical	1	7	junction_1	193.008419505471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865521	41782323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_41782432_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
Isoform_55768_22	chr5	-	1740	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-48	5	-12	-4	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865512	41782323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
Isoform_55769_121	chr5	-	1640	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	-10	5	-7	-4	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865507	41782323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
Isoform_5577_11	chr11	-	1602	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	9	0	-9	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGAAAATGGTGCTTTGC	NA	False	NA	NA	False	AATAAA	-11	NA	59855770	59854015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59855193_59855345
Isoform_55770_6	chr5	-	1551	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTTTTTGGGATTT	NA	False	NA	-9	True	AATAAA	-9	NA	41865507	41782323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
Isoform_55771_4	chr5	-	1870	8	ISM	ENSMUSG00000061755.11	ENSMUST00000202200.2	3387	9	-32	3970	-9	-3970	5prime_fragment	FALSE	canonical	3	41	junction_4	6.46813224152673	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAGAAAAGATTCA	NA	False	NA	NA	False	AAGAAA	-14	NA	42001667	41983827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
Isoform_55775_3	chr5	-	1982	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	-31	-1579	-31	1579	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGTCTCCTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	43512633	43508810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43510700_43512540
Isoform_55776_8	chr5	-	2798	11	FSM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	11	5	2	3	multi-exon	FALSE	canonical	3	15	junction_5	167.474057692527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATATCTTTTGTGTTGT	8880	False	NA	-6	True	AATAAA	-23	NA	43939440	43901962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918195_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_55778_288	chr5	-	2825	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	32	1	0	-1	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTTGTGTTGTGATT	8860	False	NA	-2	True	AATAAA	-27	NA	43939460	43901958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_5578_5	chr11	-	963	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGTCTCCTTCCCA	NA	False	NA	1	True	AATAAA	-19	NA	59937309	59861439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
Isoform_55782_10	chr5	-	2267	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	-29	68	6	-68	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTACTTTGTGGAGGT	8847	False	NA	NA	False	AATAAA	-42	NA	43939473	43908015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_55783_6	chr5	-	2307	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	17	1913	-2	67	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATTCGTTGCTGCTGT	8874	False	NA	NA	False	TATAAA	-20	NA	43939446	43915159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_55784_6	chr5	-	1176	6	FSM	ENSMUSG00000039753.17	ENSMUST00000143316.8	2731	6	-8	1563	-1	-283	multi-exon	FALSE	canonical	3	545	junction_2	25.4762634622898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGGCTATTTTTGTG	8868	False	NA	NA	False	ATTAAA	-15	NA	43939452	43919936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
Isoform_55786_10	chr5	-	1161	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	-2	2	-2	1	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCACTGTTTCCTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	44139108	44136203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_44137311_44139054
Isoform_55787_37	chr5	-	3522	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-18	9	-14	-4	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCACTGAATTTCTT	NA	False	NA	-4	True	AATAAA	-23	NA	44383982	44332504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
Isoform_55788_433	chr5	-	1331	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	49	0	-11	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607529	45591394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
Isoform_55789_105	chr5	-	1364	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	15	1	15	-1	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45607563	45591395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
Isoform_5579_5	chr11	-	1034	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	-76	3	-68	-3	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTCTGGTCTCCTTC	NA	False	NA	-2	True	AATAAA	-16	NA	59937383	59861442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
Isoform_55791_10	chr5	-	4684	20	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	145.136195469831	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216343	50117298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
Isoform_55792_258	chr5	-	4476	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	4	0	4	0	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216344	50117297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_55793_33	chr5	-	4500	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-21	1	-21	-1	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216369	50117298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_55794_6	chr5	-	2879	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-6	18544	-6	9021	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCGGTTTGATTGTCAC	NA	False	NA	NA	False	AATAAA	-28	NA	50216354	50135841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
Isoform_55797_13	chr5	-	2986	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	-133	-478	4	-12	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347852	52307556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_5580_91	chr11	-	3724	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-509	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	5287	False	NA	-5	True	ATTAAA	-18	NA	60101247	60090423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
Isoform_55803_688	chr5	-	2994	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	4	12	4	-12	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347852	52307556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_55804_98	chr5	-	3024	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	-26	12	-26	-12	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCCCAAGTCCTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	52347882	52307556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
Isoform_5581_102	chr11	-	3790	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	0	509	0	-509	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	3801	False	NA	-5	True	ATTAAA	-18	NA	60111430	60090423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_55812_5	chr5	-	2804	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-10	2458	-10	-1369	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGAGCCGGTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-44	NA	52827060	52799886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
Isoform_55813_5	chr5	-	5221	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	8	23	8	-23	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGGAAGTGCAAATAAT	NA	False	NA	1	True	AATAAA	-29	NA	52827042	52797451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
Isoform_55815_3	chr5	-	605	2	ISM	ENSMUSG00000029173.13	ENSMUST00000123856.2	751	7	-83	12230	10	-12230	5prime_fragment	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGCAAAATTTAAAA	NA	False	NA	NA	False	TATAAA	-15	NA	52827040	52825914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_52826396_52826916
Isoform_55816_3	chr5	-	2780	13	ISM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	-42	74724	-3	89	5prime_fragment	FALSE	canonical	1	2	junction_9	3.81062112172456	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATACAAAGAAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62923505	62834511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
Isoform_55818_8	chr5	-	2775	4	ISM	ENSMUSG00000047881.15	ENSMUST00000087327.13	3093	8	38032	2	-14	-2	3prime_fragment	FALSE	canonical	3	541	junction_1	12.2565175405668	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGCGACATCTTACAG	5408	False	NA	-15	True	AATAAA	-21	NA	64088134	64066409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820
Isoform_5582_13	chr11	-	4290	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	0	9	0	-9	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCTCGATACACACAAT	3801	False	NA	NA	False	AATAAA	-12	NA	60111430	60089923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_55825_111	chr5	-	3071	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	0	170	0	-2	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGCGACATCTTACAG	NA	False	NA	-15	True	AATAAA	-21	NA	64126240	64066409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
Isoform_55829_6	chr5	-	2365	3	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	24	25289	24	-7154	5prime_fragment	FALSE	canonical	3	376	junction_1	44.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATGAATGAATAA	NA	False	NA	NA	False	NA	NA	NA	64126216	64091528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_64093438_64095148_64095377_64125988
Isoform_5583_8	chr11	-	3883	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-186	-509	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	1638	False	NA	-5	True	ATTAAA	-18	NA	60113593	60090423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
Isoform_55830_4	chr5	-	1535	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	-29	1373	-29	-2	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCTGTGAATCATTCA	NA	False	NA	NA	False	AATAAA	-12	NA	64768072	64752572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
Isoform_55832_13	chr5	-	4723	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-24	0	-24	0	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-1	True	NA	-4	True	AATAAA	-19	NA	65492988	65419194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_55835_20	chr5	-	4726	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	25	0	-24	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-1	True	NA	-4	True	AATAAA	-19	NA	65492988	65419194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_55837_5	chr5	-	4713	25	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	185	junction_1	102.558519880115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	11	False	NA	-5	True	AATAAA	-18	NA	65492976	65419195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_55839_8	chr5	-	4728	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-26	-750	-23	0	multi-exon	TRUE	canonical	3	185	junction_1	103.759328563213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	0	True	NA	-4	True	AATAAA	-19	NA	65492987	65419194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
Isoform_5584_27	chr11	-	3707	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-27	-509	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	5289	False	NA	-5	True	ATTAAA	-18	NA	60101245	60090423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
Isoform_5585_15	chr11	-	3767	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-509	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	3809	False	NA	-5	True	ATTAAA	-18	NA	60111422	60090423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
Isoform_55857_42	chr19	-	682	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	13	19	13	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	32443965	32443283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_32443300_32444000
Isoform_55859_3864	chr5	-	693	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	44	1	-1	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	3864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548743	65545707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_5586_14	chr11	-	4978	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	21	0	21	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243710	60117540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_55860_64	chr5	-	740	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548789	65545706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_55863_68	chr5	-	812	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-18	-114	0	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548741	65545706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
Isoform_55865_26	chr5	-	2316	12	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	127.934900801053	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAATTTACGTATGTT	NA	False	NA	-11	True	AATAAA	-24	NA	65585746	65570561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
Isoform_55866_149	chr5	-	2414	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	134	2	134	1	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTTCAATTTACGTA	NA	False	NA	-15	True	AATAAA	-20	NA	65593158	65570565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
Isoform_55868_145	chr5	-	2488	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	60	2	60	1	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTTCAATTTACGTA	NA	False	NA	-15	True	AATAAA	-20	NA	65593232	65570565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
Isoform_5587_3	chr11	-	4983	15	NNC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	13.1552736379672	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243717	60117540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171108_60243582
Isoform_55876_62	chr5	-	1142	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	458	2960	-61	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65650285	65607146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
Isoform_55878_9	chr5	-	1169	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	429	2962	89	-2	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTTGGTTTAGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	65650314	65607148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
Isoform_5588_5	chr11	-	2129	13	FSM	ENSMUSG00000000538.19	ENSMUST00000064019.15	2151	13	25	-3	25	3	multi-exon	FALSE	canonical	1	2	junction_1	13.4935684268057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTCATGTGTGTATCT	NA	False	NA	NA	False	AATAAA	-16	NA	60243706	60131392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_55882_3	chr5	-	3456	27	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-99	8666	-99	-98	5prime_fragment	FALSE	canonical	3	463	junction_26	49.373366200218	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAGTAAGGCAATGGAT	2959	False	NA	NA	False	NA	NA	NA	65855298	65781268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
Isoform_55883_4	chr5	-	2938	7	NIC	ENSMUSG00000070780.12	novel	3180	7	NA	NA	-217	-167	intron_retention	FALSE	canonical	2	8	junction_6	12.9282206389313	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	66308883	66176111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308395
Isoform_55885_10	chr5	-	2737	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	99	2212	-37	-167	3prime_fragment	FALSE	canonical	3	18	junction_6	10.0235833025033	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	66309168	66176111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_55886_3	chr5	-	2640	8	NNC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	-56	-167	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	14.7689691237944	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	66309187	66176111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881_66309045_66309160
Isoform_55887_5	chr5	-	2082	4	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	250	8996	108	-11	internal_fragment	FALSE	canonical	3	18	junction_3	8.49836585598798	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66309017	66182895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_55888_3	chr5	-	2227	4	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	105	8996	-31	-11	internal_fragment	FALSE	canonical	3	18	junction_3	8.49836585598798	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66309162	66182895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_66184633_66203429_66203557_66255049_66255132_66308881
Isoform_55889_3	chr5	-	3316	16	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.4436284605182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66776037	66459230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_5589_3	chr11	-	3513	12	FSM	ENSMUSG00000000538.19	ENSMUST00000102682.5	2256	12	22	-1279	22	912	multi-exon	FALSE	canonical	3	31	junction_5	7.4022556312081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	60243709	60130483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
Isoform_55890_4	chr5	-	3441	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-87	3172	6	-12	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATCAAGCAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-10	NA	66776111	66459242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_55891_5	chr5	-	3389	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-22	3159	-15	1	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776046	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_55892_8	chr5	-	3332	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23598	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66752385	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_55893_3	chr5	-	3379	17	NIC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	34.215710481444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776033	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_55894_4	chr5	-	3332	17	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	23600	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.6808772313686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66752383	66459230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_55895_10	chr5	-	3333	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-47	3047	-22	1	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776053	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_55896_18	chr5	-	3270	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23587	-9	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCAAGCAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-13	NA	66752396	66459239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_55897_12	chr5	-	3316	16	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	22.2297098496584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66776033	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
Isoform_55898_6	chr5	-	3272	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	23598	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	25.1761792176653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	66752385	66459229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
Isoform_55899_3	chr5	-	588	3	NNC	ENSMUSG00000029207.17	novel	629	4	NA	NA	23592	-29912	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAACCTGTTA	NA	False	NA	NA	False	AATACA	-39	NA	66752391	66649168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_66649516_66700804_66700961_66752306
Isoform_5590_4	chr11	-	1468	9	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-5	-401	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCTCATTTTTATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	60307882	60291864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
Isoform_55900_11	chr5	-	849	7	FSM	ENSMUSG00000037685.16	ENSMUST00000113652.8	854	7	0	5	0	-5	multi-exon	FALSE	canonical	3	53	junction_2	8.34166250416147	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTCATGATTCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	68004774	67938226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
Isoform_55901_7	chr5	-	1031	7	FSM	ENSMUSG00000029209.16	ENSMUST00000173927.8	1011	7	-19	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_3	36.2142544065486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAACAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-38	NA	69749636	69733153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_69733297_69735320_69735496_69736850_69737030_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_55902_3	chr5	-	1838	7	FSM	ENSMUSG00000029209.16	ENSMUST00000173927.8	1011	7	-19	-808	0	-3	multi-exon	TRUE	canonical	3	26	junction_3	36.2142544065486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATCTCATTTTCT	NA	False	NA	NA	False	AATAAA	-42	NA	69749636	69732346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_69733297_69735320_69735496_69736850_69737030_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_55903_22	chr5	-	1844	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	47	3	0	-3	multi-exon	FALSE	canonical	3	104	junction_4	11.5998084275369	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATCTCATTTTCT	NA	False	NA	NA	False	AATAAA	-42	NA	69749636	69732346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_55904_37	chr5	-	1037	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	47	810	0	1	multi-exon	FALSE	canonical	3	104	junction_4	11.5998084275369	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAACAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-38	NA	69749636	69733153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
Isoform_55907_9	chr5	-	567	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	-30	5	-30	-5	multi-exon	FALSE	canonical	3	51	junction_2	6	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACTAATAAGTTGTTG	NA	False	NA	NA	False	AATAAA	-10	NA	71705578	71600171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_71600613_71660793_71660857_71705515
Isoform_55909_119	chr5	-	1428	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	34	2433	1	3	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGCTTGATTTCAGT	NA	False	NA	-1	True	AATACA	-17	NA	72325498	72316350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
Isoform_5591_5	chr11	-	1608	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGTGAATCTT	NA	False	NA	-14	True	NA	NA	NA	60307858	60291465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_55913_9	chr5	-	1513	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	141.390416931276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTTGCTTGATTTCA	NA	False	NA	-3	True	AATACA	-15	NA	72325469	72316352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325305
Isoform_55914_25	chr5	-	3710	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	0	2	0	1	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTGATAAAGGATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	72717027	72670645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_55916_5	chr5	-	828	5	FSM	ENSMUSG00000072889.10	ENSMUST00000146761.2	798	5	-23	-7	13	5	multi-exon	FALSE	canonical	3	106	junction_4	15.8587515271537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTTGGAAGCTTCA	NA	False	NA	NA	False	AATAAA	-32	NA	72717014	72707559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
Isoform_55917_3	chr5	-	2146	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	387	21	-47	-7	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAAGGCAGAGCCA	NA	False	NA	-22	True	AATAAA	-14	NA	73495948	73479562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
Isoform_5592_79	chr11	-	1787	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	14	12	-1	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307863	60291463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
Isoform_55920_3	chr5	-	367	3	ISM	ENSMUSG00000029153.12	ENSMUST00000201908.4	2378	6	356	9809	-34	-4357	5prime_fragment	FALSE	canonical	3	44	junction_2	59.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAATAAATTAATAATCG	NA	False	NA	NA	False	AATAAA	-28	NA	73495935	73489364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_73489544_73493162_73493289_73495873
Isoform_55921_26	chr5	-	2878	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	53	855	53	-855	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	73805080	73790946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
Isoform_55923_17	chr5	-	2481	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	13	1090	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTTGGTTTTCCTAC	NA	False	NA	-20	True	ATTAAA	-28	NA	74226396	74161369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_55924_9	chr5	-	3155	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	6	-1316	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGCAGCTAATTT	NA	False	NA	-5	True	ATTAAA	-13	NA	74226403	74160702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_55925_3	chr5	-	4468	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTATTTTTGGCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	74226406	74159392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_55927_3	chr5	-	4546	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	6	75	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	74226403	74159311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
Isoform_55928_21	chr5	-	2546	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	1983	17	1090	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTTGGTTTTCCTAC	NA	False	NA	-20	True	ATTAAA	-28	NA	74229064	74161369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_55929_17	chr5	-	3212	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	1317	17	-1317	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGCAGCTAATT	NA	False	NA	-6	True	ATTAAA	-12	NA	74229064	74160703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_55930_6	chr5	-	4550	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	1	6	1	-6	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTATTTTTGGCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	74229091	74159392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_55931_3	chr5	-	4602	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	30	-75	19	75	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	74229062	74159311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
Isoform_55933_63	chr5	-	2383	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	14	1275	-6	1	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTCAAGCTGTCGCTA	NA	False	NA	-5	True	AATAAA	-23	NA	74692396	74366751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
Isoform_55934_22	chr5	-	2532	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	32	0	32	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	1	True	AATAAA	-19	NA	74863541	74757764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
Isoform_55935_49	chr5	-	2094	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	162	7443	162	5749	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTAATTTATATACC	NA	False	NA	-2	True	ATTAAA	-15	NA	75205273	75166091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_55936_173	chr5	-	1101	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	161	8437	161	4755	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGGGCAGCCTTTGT	NA	False	NA	73	True	AATACA	-14	NA	75205274	75167085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_55937_11	chr5	-	1205	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	59	8435	59	4757	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGCAGCCTTTGTTA	NA	False	NA	75	True	AATACA	-16	NA	75205376	75167083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
Isoform_5594_12	chr11	-	1817	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	-16	12	-16	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307893	60291463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
Isoform_55941_4	chr5	-	1249	3	ISM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	49	60829	49	-1052	5prime_fragment	FALSE	canonical	3	18	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	76452346	76420852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_76421891_76451270_76451350_76452214
Isoform_55943_14	chr5	-	1163	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	23	-5	0	5	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCACCATGTGTGTATA	NA	False	NA	NA	False	AATAAA	-36	NA	76478980	76459968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
Isoform_55945_16	chr5	-	3572	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	354	55	-59	-55	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGCATCTGATTTTT	NA	False	NA	-6	True	TATAAA	-16	NA	77099071	77061177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
Isoform_55952_4	chr5	-	632	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	0	-1	0	1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCTTTTCTGTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	77359318	77352952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
Isoform_55957_84	chr5	-	2267	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	26	-5	1	5	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATCTGTGACCAAG	NA	False	NA	74	True	AATAAA	-19	NA	77457905	77442023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
Isoform_55959_49	chr5	-	2639	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-340	-11	-340	11	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGACCAAGTATACA	NA	False	NA	80	True	AATAAA	-25	NA	77458271	77442017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
Isoform_5596_6	chr11	-	1564	8	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307874	60291462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
Isoform_55961_10	chr5	-	2423	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-343	-76	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTCAAGTTTTTTA	NA	False	NA	-7	True	AATAAA	-29	NA	77458274	77442104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
Isoform_55962_10	chr5	-	2153	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	8	5	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATCTGTGACCAAG	NA	False	NA	74	True	AATAAA	-19	NA	77457923	77442023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
Isoform_55963_8	chr5	-	2482	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-327	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCATGTATCTGTG	NA	False	NA	68	True	AATAAA	-13	NA	77458258	77442029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
Isoform_55968_43	chr5	-	3138	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	36	18	0	-18	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAACACAAAGT	NA	False	NA	-24	True	NA	NA	NA	86213406	86159900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_55969_3	chr5	-	3231	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	-45	6	-45	-6	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGTGGCATCTTGTCT	NA	False	NA	-12	True	ATTAAA	-11	NA	86213487	86159888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_5597_3	chr11	-	1617	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307927	60291462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
Isoform_55971_12	chr5	-	3100	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	98	-6	37	6	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTGTGGTGGTGTTC	NA	False	NA	0	True	ATTAAA	-23	NA	86213344	86159876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_55972_4	chr5	-	2969	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	34.9586013196806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGCATCTTGTCTGTG	NA	False	NA	-9	True	ATTAAA	-14	NA	86213396	86159885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
Isoform_55977_3	chr5	-	4046	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	37	2507	-27	548	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAATATATAT	7125	False	NA	NA	False	NA	NA	NA	86320625	86259652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
Isoform_55980_344	chr5	-	2563	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-33	8	-33	2	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAAGTTCTGTATATT	NA	False	NA	-6	True	AATAAA	-28	NA	88824063	88807314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_55981_557	chr5	-	2517	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	21	0	-11	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTGTAGAAGAATCAA	NA	False	NA	-19	True	AATAAA	-15	NA	88824030	88807327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_55982_59	chr5	-	2608	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-72	2	-72	-2	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGTATATTTTCTTT	NA	False	NA	0	True	AATAAA	-34	NA	88824102	88807308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_55983_26	chr5	-	2745	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	-207	0	207	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGATTACCTAAC	NA	False	NA	-33	True	AATAAA	-14	NA	88824030	88807099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_55988_25	chr5	-	2797	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-50	-209	-50	209	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGGAGATTACCTAACAG	NA	False	NA	-31	True	AATAAA	-16	NA	88824080	88807097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
Isoform_5599_4	chr11	-	1237	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	1	-408	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	118.191464252806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATCAAGCCTCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	60307867	60291871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300411_60300457_60307576
Isoform_55995_17	chr5	-	1328	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	3	2	3	1	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371857	90362584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
Isoform_55996_25	chr5	-	1299	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	32	2	3	1	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371828	90362584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
Isoform_55997_6	chr5	-	1271	6	NIC	ENSMUSG00000035505.15	novel	1333	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.3016612928194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTCTGGTGAGATAA	NA	False	NA	-8	True	AATAAA	-12	NA	90371798	90362586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370195_90371474
Isoform_55998_53	chr5	-	1302	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	3	2	3	1	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTGGTGAGATAATT	NA	False	NA	-6	True	AATAAA	-14	NA	90371828	90362584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
Isoform_55999_6	chr5	-	1334	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-31	4	-2	-1	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCTCTGGTGAGATAA	NA	False	NA	-8	True	AATAAA	-12	NA	90371862	90362586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
Isoform_56_257	ERCC-00060	+	495	1	FSM	ERCC-00060A	DQ516763	506	1	2	9	2	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGC	NA	False	NA	NA	False	NA	NA	NA	2	497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00060_+_0_500
Isoform_5600_3	chr11	-	1881	9	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	150.736473273724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307872	60291462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
Isoform_56000_4	chr5	-	1325	6	NIC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.5534072067928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGCTCTGGTGAGATA	NA	False	NA	-9	True	AATAAA	-11	NA	90371850	90362587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370195_90371474
Isoform_56001_4	chr5	-	2620	6	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	95671	-4	-4384	4	3prime_fragment	FALSE	canonical	3	159	junction_3	16.7976188788769	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTTGTATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	90391931	90376595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722
Isoform_56004_7	chr5	-	3821	24	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	47	26296	4	-1405	5prime_fragment	TRUE	canonical	1	45	junction_23	31.4708134356053	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGAAAAGAAGGAAAAA	NA	False	NA	NA	False	AAGAAA	-39	NA	90514040	90402619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
Isoform_56006_6	chr5	-	2035	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-70	2	-70	-2	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCTTTTATGGATGAA	1265	False	NA	NA	False	TATAAA	-16	NA	92110997	92096764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_56007_22	chr5	-	1931	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-60	96	-60	1	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTTTACAGACTTT	1275	False	NA	NA	False	AATAAA	-22	NA	92110987	92096858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_56008_37	chr5	-	1235	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	346	386	4	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1681	False	NA	-5	True	ATTAAA	-19	NA	92110581	92097148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_5601_8	chr11	-	1648	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	146.351460532514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGAATCTTTGG	NA	False	NA	-11	True	NA	NA	NA	60307874	60291462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
Isoform_56010_22	chr5	-	1620	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-39	386	-39	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1296	False	NA	-5	True	ATTAAA	-19	NA	92110966	92097148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_56011_32	chr5	-	1364	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	217	386	-116	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1552	False	NA	-5	True	ATTAAA	-19	NA	92110710	92097148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_56014_6	chr5	-	1636	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	331	0	-2	0	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTATGGATGAATG	1666	False	NA	NA	False	TATAAA	-18	NA	92110596	92096762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
Isoform_56016_4	chr5	-	1233	8	ISM	ENSMUSG00000029403.15	ENSMUST00000069937.11	3976	13	0	16090	0	145	5prime_fragment	FALSE	canonical	0	0	junction_7	2.65729646253404	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAGAAAGAAAGAAAAAG	NA	False	NA	NA	False	AATAGA	-40	NA	92190900	92170022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
Isoform_56017_19	chr5	-	1920	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	0	796	0	-13	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231372	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_56018_25	chr5	-	1874	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	46	796	46	-13	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231326	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_56021_256	chr5	-	1929	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-58	13	1	-13	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231575	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_56022_52	chr5	-	4282	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-58	-2340	1	4	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231575	92200018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_5603_8	chr11	-	1822	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-33	-840	0	0	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307877	60291463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
Isoform_56032_34	chr5	-	1850	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	15	2367	15	-13	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231401	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
Isoform_56036_442	chr5	-	1830	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	3	2349	1	-13	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231575	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_56037_95	chr5	-	4183	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	3	-4	1	4	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231575	92200018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_56040_55	chr5	-	1858	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-25	2349	-25	-13	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACATG	NA	False	NA	NA	False	AATGAA	-6	NA	92231603	92202371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
Isoform_56048_5	chr5	-	1837	8	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	-11039	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25905486623571	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAATTACC	NA	False	NA	NA	False	NA	NA	NA	92387919	92374549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92387706
Isoform_56049_6	chr5	-	782	3	NNC	ENSMUSG00000029410.12	novel	732	3	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTACCTGT	NA	False	NA	NA	False	NA	NA	NA	92376845	92374546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_92375087_92376505_92376594_92376691
Isoform_5605_9	chr11	-	1595	8	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATCTTTGGTCTAA	NA	False	NA	-6	True	NA	NA	NA	60307879	60291457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
Isoform_56052_3	chr5	-	2422	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	-11	3	-11	2	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTAAGGTCTGAGTGTCC	9187	False	NA	-4	True	NA	NA	NA	92426040	92405520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
Isoform_56055_39	chr5	-	4988	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	35	-3	0	3	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAAATCTCTCCATAAT	NA	False	NA	-3	True	AATAAA	-20	NA	92457848	92431865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
Isoform_56056_98	chr5	-	2285	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	36	2699	1	32	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATTTGTAGCAATTTG	NA	False	NA	-4	True	ATTAAA	-33	NA	92457847	92434567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
Isoform_56062_16	chr5	-	996	8	FSM	ENSMUSG00000029415.5	ENSMUST00000202604.2	996	8	1	-1	1	1	multi-exon	FALSE	canonical	3	305	junction_2	27.4456791885799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAATAAGAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	92457847	92449492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
Isoform_56066_445	chr5	-	2251	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	96	5	0	-5	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92582982	92563403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_56067_160	chr5	-	2320	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	24	8	24	-8	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTAATTCTGTCTGGTG	NA	False	NA	-8	True	AATAAA	-17	NA	92583054	92563406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_56069_30	chr5	-	2381	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	-34	5	-34	-5	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92583112	92563403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_56072_40	chr5	-	2063	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	179.096761556428	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92582982	92563403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
Isoform_56076_60	chr5	-	2040	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-22	2680	-22	-2680	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTGTGGTTGGGCCC	NA	False	NA	-9	True	AATAAA	-11	NA	92653518	92591852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
Isoform_56077_15	chr5	-	4716	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-15	-3	-15	3	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGAACTGTCTCTCA	NA	False	NA	-8	True	ATTAAA	-19	NA	92653511	92589169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
Isoform_56081_528	chr5	-	2751	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	46	7	-21	-7	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTTGGTTTGTGTAGGA	NA	False	NA	-9	True	AATAAA	-11	NA	93354308	93329798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
Isoform_56088_55	chr5	-	3735	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-22	6291	1	2661	5prime_fragment	TRUE	canonical	3	151	junction_3	20.8096131631513	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGCCTGCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	97259454	97241129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
Isoform_56093_4	chr5	-	2410	3	FSM	ENSMUSG00000055725.12	ENSMUST00000112968.2	1875	3	-33	-502	-33	502	multi-exon	FALSE	canonical	3	177	junction_1	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAAAATAAACC	NA	False	NA	NA	False	AAGAAA	-10	NA	97259488	97249498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_97251375_97256024_97256188_97259117
Isoform_56094_47	chr5	-	3380	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	44	0	44	0	multi-exon	FALSE	canonical	3	176	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGTGAGTTAATAACAT	NA	False	NA	-3	True	AATAAA	-19	NA	97540194	97530056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_97532729_97539486
Isoform_56097_25	chr5	-	3179	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	16	229	16	-229	multi-exon	FALSE	canonical	3	176	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTATGTAATGCTGATAC	NA	False	NA	-8	True	AATAAA	-17	NA	97540222	97530285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_97532729_97539486
Isoform_56103_6	chr5	-	3314	19	FSM	ENSMUSG00000029334.15	ENSMUST00000161490.8	4968	19	160	1494	-156	1	multi-exon	FALSE	canonical	1	2	junction_7	5.01386965216377	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99185050	99079125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
Isoform_56104_4	chr5	-	2912	14	FSM	ENSMUSG00000089809.10	ENSMUST00000168092.8	2987	14	79	-4	79	4	multi-exon	FALSE	canonical	1	1	junction_13	1.81707874015657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTGGCGTCTTCTTT	NA	False	NA	3	True	AATACA	-19	NA	99400707	99365280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382548_99388681_99388820_99389267_99389391_99390922_99391106_99400572
Isoform_56105_3	chr5	-	2937	14	FSM	ENSMUSG00000089809.10	ENSMUST00000031276.15	2990	14	57	-4	57	4	multi-exon	FALSE	canonical	0	0	junction_10	2.0897042626471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTGGCGTCTTCTTT	NA	False	NA	3	True	AATACA	-19	NA	99400729	99365280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382551_99388681_99388820_99389267_99389391_99390922_99391106_99400572
Isoform_56108_73	chr5	-	1724	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	16	5071	-5	-3	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126781	100108864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_5611_138	chr11	-	4033	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	22	5	-18	-5	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGTACTTTTAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	60618067	60604973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
Isoform_56110_5	chr5	-	1691	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-22	5142	-22	74	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCCAGTGTGACAG	NA	False	NA	69	True	NA	NA	NA	100126819	100108935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_56111_5	chr5	-	2150	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-1	4662	-1	1	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATCTATTAATTTAAA	NA	False	NA	-9	True	AATAAA	-16	NA	100126798	100108455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_56112_37	chr5	-	1671	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-9	8	8	-3	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126785	100108864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_56116_23	chr5	-	1581	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	11	408	8	-3	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126785	100108864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_56118_3	chr5	-	1944	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-3	-404	0	0	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCTATTAATTTAA	NA	False	NA	-10	True	AATAAA	-15	NA	100126797	100108456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_56119_21	chr5	-	1524	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	9	4	8	-3	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126785	100108864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
Isoform_5612_37	chr11	-	3649	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	92	0	-8	0	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668099	60630883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_56121_6	chr5	-	2907	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	8	-5	intron_retention	FALSE	canonical	3	2301	junction_6	866.95323885856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126785	100108866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
Isoform_56124_17	chr5	-	2353	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-199	-5	-199	-1	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGTCAGGTACTGC	NA	False	NA	-15	True	AATAAA	-20	NA	100187722	100182580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_56127_12	chr5	-	2395	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-201	-2	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGCGTCAGGTACTG	NA	False	NA	-16	True	AATAAA	-19	NA	100187724	100182581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
Isoform_56128_48	chr5	-	2249	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-643	1146	-201	-2	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGCGTCAGGTACTG	NA	False	NA	-16	True	AATAAA	-19	NA	100187724	100182581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_56129_7	chr5	-	3387	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-643	8	-201	-8	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATCTCAGTTAAGT	NA	False	NA	-22	True	AATAAA	-10	NA	100187724	100181443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_5613_4	chr11	-	3861	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_6	40.6151658312721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCCATATTTTCTGGTG	NA	False	NA	-9	True	AATAAA	-6	NA	60668091	60630893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639126_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
Isoform_56130_11	chr5	-	2277	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-670	1145	-228	-1	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGTCAGGTACTGC	NA	False	NA	-15	True	AATAAA	-20	NA	100187751	100182580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_56131_4	chr5	-	3465	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-708	-5	-266	5	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTCTTGCTATGTATG	NA	False	NA	-9	True	AATAAA	-23	NA	100187789	100181430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_56136_4	chr5	-	4117	6	ISM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-1008	3	-213	-3	intron_retention	FALSE	canonical	3	934	junction_3	96.8949947107693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTGCGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	100187736	100182582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
Isoform_56137_3	chr5	-	3390	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-1018	2	-223	-2	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGCGTCAGGTACTG	NA	False	NA	-16	True	AATAAA	-19	NA	100187746	100182581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
Isoform_56147_6	chr5	-	4277	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	51	junction_7	217.697988658871	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8111	False	NA	-9	True	ATTAAA	-17	NA	100564090	100509509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56148_211	chr5	-	4183	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	0	combination_of_known_splicesites	TRUE	canonical	2	466	junction_5	100.698448422967	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8114	False	NA	-7	True	ATTAAA	-19	NA	100564087	100509507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56149_4	chr5	-	4144	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-25	-65	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTCTTTGATGTC	8083	False	NA	-35	True	TATAAA	-10	NA	100564118	100509577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56150_7	chr5	-	4389	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	228.629441668463	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8105	False	NA	-9	True	ATTAAA	-17	NA	100564096	100509509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100510090_100511235_100511307_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
Isoform_56152_16	chr5	-	4125	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8091	False	NA	-10	True	ATTAAA	-16	NA	100564110	100509510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56154_14	chr5	-	4089	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_13	182.154238673347	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8091	False	NA	-7	True	ATTAAA	-19	NA	100564110	100509507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56155_4	chr5	-	4227	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	51	junction_7	238.444243093583	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8116	False	NA	-9	True	ATTAAA	-17	NA	100564085	100509509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56156_54	chr5	-	4141	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	163	junction_5	145.633410441033	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8111	False	NA	-7	True	ATTAAA	-19	NA	100564090	100509507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56159_5	chr5	-	4066	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_13	204.849353428318	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_5616_802	chr11	-	1959	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	106	793	-68	4	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60701985	60679722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_56160_7	chr5	-	4025	25	NIC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	48	junction_13	210.643421548518	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8109	False	NA	-8	True	ATTAAA	-18	NA	100564092	100509508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
Isoform_56167_3	chr5	-	687	4	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	6	0	-6	intron_retention	FALSE	canonical	3	348	junction_3	11.0453610171873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAAACATTAGAATGT	NA	False	NA	11	True	AATAAA	-25	NA	100577374	100568706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955
Isoform_56168_130	chr5	-	600	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	6	0	-6	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAAACATTAGAATGT	NA	False	NA	11	True	AATAAA	-25	NA	100577374	100568706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
Isoform_56169_32	chr5	-	926	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	-320	0	320	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTGGTAAAGATTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	100577374	100568380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
Isoform_5617_482	chr11	-	2774	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	77	7	77	-7	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACACTCCTCATATT	NA	False	NA	-15	True	AATAAA	-12	NA	60702014	60678936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_56170_3	chr5	-	2936	4	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	343	junction_3	13.0724477007517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAAACATTAGAATGT	NA	False	NA	11	True	AATAAA	-25	NA	100577418	100568706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100568832_100569826_100569901_100574594_100577098_100577184
Isoform_56172_23	chr5	-	4467	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-15	-1	-15	1	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTTTTGCATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	100648508	100589898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
Isoform_56177_9	chr5	-	3800	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTTTTGCATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	100648504	100589898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
Isoform_56179_8	chr5	-	1257	3	ISM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-5	37879	-5	4421	5prime_fragment	FALSE	canonical	3	163	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTATAGCTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	100648498	100627778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_100628181_100632998_100633715_100648359
Isoform_5618_165	chr11	-	2036	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	29	793	29	4	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60702062	60679722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_56180_72	chr5	-	1705	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	38	0	3	0	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822112	100802588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
Isoform_56181_27	chr5	-	1525	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACGCGACTCTTCATTA	NA	False	NA	-4	True	AATAAA	-17	NA	100822102	100802591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
Isoform_56182_4	chr5	-	1716	6	NNC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	129.460418661458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACGCGACTCTTCATTAC	NA	False	NA	-3	True	AATAAA	-18	NA	100822093	100802590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811767_100821854
Isoform_56183_7	chr5	-	1707	7	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	106.954299690205	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822119	100802588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100811445_100811568_100815757_100815925_100821854
Isoform_56184_3	chr5	-	1556	6	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	138.229374591655	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822135	100802588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100811445_100811568_100821854
Isoform_56185_7	chr5	-	3099	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	17	1	6	-1	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATGGTCATTCTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	100867565	100827350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
Isoform_56187_15	chr5	-	3685	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	-2	6	-2	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946466	100910016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
Isoform_56188_3	chr5	-	3148	14	NNC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	9	1332	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	19.9282737504922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	100946455	100918081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
Isoform_5619_85	chr11	-	2854	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	-3	7	-3	-7	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACACTCCTCATATT	NA	False	NA	-15	True	AATAAA	-12	NA	60702094	60678936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_56190_24	chr5	-	1679	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-13	2	-6	-2	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTAATATCTTATTT	NA	False	NA	-5	True	AATAAA	-17	NA	100968819	100953059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_56191_3	chr5	-	2078	10	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-3	5	at_least_one_novel_splicesite	TRUE	non_canonical	2	9	junction_3	76.3558918631838	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTTTGTAATATCTT	NA	False	NA	-9	True	AATAAA	-13	NA	100968816	100953063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100953529_100953556_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
Isoform_56192_19	chr5	-	2119	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	10	10	-8	1	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAAAGTTTGTAATA	NA	False	NA	-13	True	AATAAA	-9	NA	100968821	100953067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_56193_3	chr5	-	2535	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	-3	-393	-3	393	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCACCAAA	NA	False	NA	NA	False	NA	NA	NA	100968834	100952664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
Isoform_56197_5	chr5	-	2114	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	6	-2	intron_retention	TRUE	canonical	3	24	junction_6	55.1507876190359	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTAATATCTTATTT	NA	False	NA	-5	True	AATAAA	-17	NA	100968825	100953059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
Isoform_56199_3	chr5	-	1989	9	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129046	-322	-999	322	intron_retention	FALSE	canonical	3	14	junction_1	5.88960949469487	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAACAAAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	102000378	101983701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088
Isoform_56200_3	chr5	-	1980	8	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	129046	7422	-999	-7422	intron_retention	FALSE	canonical	3	26	junction_4	2.9623487647611	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGGACAGTTTAGGAATG	NA	False	NA	NA	False	TTTAAA	-44	NA	102000378	101991445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088
Isoform_56202_15	chr5	-	3144	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	32	17	32	13	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTACTAGTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	104059093	104009932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
Isoform_56204_3	chr5	-	1731	7	FSM	ENSMUSG00000029311.17	ENSMUST00000031251.16	1825	7	84	10	3	-10	multi-exon	FALSE	canonical	0	0	junction_2	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTATCTGTCTCTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	104169701	104137637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_104138461_104140683_104140801_104151037_104151176_104156444_104156552_104157660_104157793_104166039_104166148_104169395
Isoform_56206_4	chr5	-	2407	5	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.6335943985918	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGAATTGTGCGTTTG	NA	False	NA	-7	True	NA	NA	NA	105007676	104961032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_104962251_104962444_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_56207_3	chr5	-	2857	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007933	104961033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_56208_5	chr5	-	447	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-14	-975	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTACTTTATACTGG	NA	False	NA	NA	False	NA	NA	NA	105007673	104963183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_56210_42	chr5	-	1927	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	31	57	31	0	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCATTATACTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	107745474	107696889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_56211_28	chr5	-	1983	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	29	3	29	-1	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATTGCATAATTCT	NA	False	NA	NA	False	CATAAA	-24	NA	107745476	107696835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_56212_5	chr5	-	1968	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	27	11	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATACCACCATAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	107745478	107696876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
Isoform_56214_3	chr5	-	1478	11	ISM	ENSMUSG00000011831.17	ENSMUST00000128723.8	2441	18	180	24084	-89	1205	5prime_fragment	FALSE	canonical	3	153	junction_1	18.3698121928342	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATTAGAAAAAGTAAGTA	NA	False	NA	NA	False	TTTAAA	-13	NA	108016854	107960236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
Isoform_56223_17	chr5	-	1753	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	52	916	0	734	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCATGATTTACTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	108134899	108056834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_56226_5	chr5	-	1792	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	16	913	16	737	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATGATTTACTGTGTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	108134935	108056831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
Isoform_56230_3	chr5	-	3731	5	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.214622294571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAACCTATCATAATTG	NA	False	NA	-11	True	AATAAA	-20	NA	108280449	108269503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_108271828_108271848_108272626_108273766_108273951_108277883_108277982_108280101
Isoform_56231_28	chr5	-	1463	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-24	2361	-24	-927	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	108280510	108271853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
Isoform_56232_83	chr5	-	1378	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	61	2361	6	-927	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	108280425	108271853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
Isoform_56235_3	chr5	-	1279	3	NIC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-24	-927	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	115.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	108280510	108271853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_108272626_108277883_108277982_108280101
Isoform_56236_3	chr5	-	1013	2	FSM	ENSMUSG00000063406.12	ENSMUST00000119784.2	689	2	-10	-314	-7	59	multi-exon	FALSE	canonical	3	235	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCAGCCTTGGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	108280406	108277273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108277982_108280101
Isoform_56237_722	chr5	-	300	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	62	9	11	-7	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGGCTTCCTCTCTCT	5564	False	NA	-9	True	AATAAA	-15	NA	108582252	108581118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
Isoform_56238_34	chr5	-	334	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	35	2	-16	0	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTCTCTTTACTGT	5537	False	NA	-2	True	AATAAA	-22	NA	108582279	108581111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
Isoform_56239_11	chr5	-	2178	4	FSM	ENSMUSG00000033615.10	ENSMUST00000046892.10	2189	4	4	7	4	-7	multi-exon	FALSE	canonical	3	7	junction_1	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTGGCTATTCCTTC	NA	False	NA	-7	True	AATAAA	-12	NA	108697886	108666426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108668193_108673257_108673434_108696371_108696476_108697754
Isoform_56242_169	chr5	-	4464	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-11	0	5	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777616	108717279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_56244_7	chr5	-	4286	26	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_24	73.7455517302569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTGGCTTGTAAAG	NA	False	NA	-31	True	ATTAAA	-20	NA	108777616	108717282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
Isoform_56245_7	chr5	-	4320	27	FSM	ENSMUSG00000062234.15	ENSMUST00000135225.8	4310	27	-16	6	0	0	multi-exon	FALSE	canonical	3	15	junction_23	73.3495017589351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777621	108717285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_56246_6	chr5	-	4305	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	73.3449033817007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTTGTAAAGCACT	NA	False	NA	-27	True	ATTAAA	-24	NA	108777603	108717278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_56247_6	chr5	-	4649	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	6	0	intron_retention	FALSE	canonical	3	318	junction_9	27.9418246027381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTGTAAAGCACTTC	NA	False	NA	-25	True	ATTAAA	-26	NA	108777615	108717276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
Isoform_56250_6	chr5	-	4569	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	13	356	13	-2	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808664	108794914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
Isoform_56252_16	chr5	-	632	2	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	928	-3	928	1	intron_retention	FALSE	canonical	3	615	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109703411	109702577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_109702937_109703138
Isoform_56253_159	chr5	-	515	3	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	898	-5	898	-1	3prime_fragment	FALSE	canonical	3	516	junction_2	49.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109703441	109702575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_109702937_109703138_109703224_109703372
Isoform_56256_36	chr5	-	1032	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2215	1	-248	-1	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109704587	109702575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
Isoform_56257_14	chr5	-	1249	7	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	1210	1	1210	-1	3prime_fragment	FALSE	canonical	1	48	junction_6	234.65719677862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGCCAGCCATCATTAA	NA	False	NA	-8	True	NA	NA	NA	109705592	109702575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383
Isoform_56260_20	chr5	-	1324	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	0	-1	0	1	multi-exon	FALSE	canonical	1	25	junction_7	229.794229159703	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109706859	109702577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
Isoform_56262_5	chr5	-	1458	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	-56	3	1	1	multi-exon	FALSE	canonical	1	3	junction_7	232.416937104552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109706858	109702577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
Isoform_56263_4	chr5	-	885	5	FSM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	-70	-3	-70	1	multi-exon	FALSE	canonical	1	13	junction_3	269.602021505774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109704409	109702577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_109702937_109703138_109703224_109703372_109703527_109703884_109704048_109704285
Isoform_56266_5	chr5	-	539	3	NIC	ENSMUSG00000033467.13	novel	812	5	NA	NA	360	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_2	278.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109703979	109702577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_109702937_109703138_109703224_109703884
Isoform_56267_4	chr5	-	733	4	NIC	ENSMUSG00000033467.13	novel	812	5	NA	NA	-71	2	combination_of_known_splicesites	FALSE	canonical	1	50	junction_3	264.478102433201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	-9	True	NA	NA	NA	109704410	109702576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_109702937_109703138_109703224_109703884_109704048_109704285
Isoform_56268_9	chr5	-	396	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	172	31	-117	-31	multi-exon	FALSE	canonical	3	125	junction_2	15.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAG	7829	False	NA	NA	False	NA	NA	NA	109899580	109886727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_109886877_109887064_109887192_109899460
Isoform_56270_4	chr5	-	2469	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	-985	-3	10	-1	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256053	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
Isoform_56271_4	chr5	-	1361	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110255299	110251843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255210
Isoform_56272_4	chr5	-	1439	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110255542	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255377
Isoform_56273_123	chr5	-	1616	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	0	1	0	-1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256063	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
Isoform_56274_5	chr5	-	1739	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	-123	1	-123	-1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256186	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
Isoform_56275_4	chr5	-	1386	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	80.7902297588625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256042	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110255721
Isoform_56276_8	chr5	-	1702	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_8	32.0497659897853	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTGGTTTTGTATAGGT	NA	False	NA	-4	True	ATTAAA	-28	NA	110256062	110251840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
Isoform_56278_7	chr5	-	1818	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	150	junction_7	31.16185527997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110256063	110251844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110255064_110255721
Isoform_56279_4	chr5	-	1790	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	150	junction_7	32.2332063536462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256062	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
Isoform_5628_22	chr11	-	1808	7	FSM	ENSMUSG00000020534.15	ENSMUST00000173260.8	1283	7	-77	-448	-77	448	multi-exon	FALSE	canonical	3	1109	junction_4	39.2233632191609	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	60701994	60687622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
Isoform_56280_3	chr5	-	2955	4	NIC	ENSMUSG00000033434.16	novel	1481	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	220	junction_2	8.16496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTGGTTTTGTATAGG	NA	False	NA	-5	True	ATTAAA	-27	NA	110256035	110251841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110252525_110252755_110252965_110253064_110253224_110254131
Isoform_56281_217	chr5	-	2024	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	23	-3	-10	3	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGTTTTAAAGGGAAA	NA	False	NA	-17	True	AATAAA	-21	NA	110417730	110407017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
Isoform_56283_176	chr5	-	2017	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	49	32	-10	-7	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417730	110407027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
Isoform_56285_144	chr5	-	1036	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-6	11	-6	2	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAATGGGTGTGGTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	110434058	110422158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
Isoform_56287_17	chr5	-	707	2	FSM	ENSMUSG00000029499.12	ENSMUST00000126882.2	466	2	-73	-168	-6	168	multi-exon	FALSE	canonical	3	476	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAATAATT	NA	False	NA	NA	False	NA	NA	NA	110434058	110431221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110431620_110433749
Isoform_56289_6	chr5	-	3620	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	94	220	-5	1	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAACAAAAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	110596374	110510655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
Isoform_56290_43	chr5	-	3098	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-5	-2117	-5	-3	multi-exon	FALSE	canonical	3	401	junction_2	98.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110596374	110577743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110580012_110580766_110580968_110595745
Isoform_56294_516	chr5	-	1877	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	31	167	-6	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8872	False	NA	-11	True	AATAAA	-15	NA	110801252	110796450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_56295_114	chr5	-	1906	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	2	167	2	-167	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8843	False	NA	-11	True	AATAAA	-15	NA	110801281	110796450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_56297_11	chr5	-	1964	14	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-162	intron_retention	FALSE	canonical	3	589	junction_8	57.5579975061944	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTAGTGTGGTTTGGTT	8872	False	NA	-6	True	AATAAA	-20	NA	110801252	110796445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
Isoform_56299_17	chr5	-	2815	10	ISM	ENSMUSG00000029505.18	ENSMUST00000112435.9	10420	52	133	64908	1	8391	5prime_fragment	FALSE	canonical	2	6	junction_7	21.2626142661738	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAGAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	110918450	110877146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110901669_110901781_110903262_110904633_110918357
Isoform_56300_4	chr5	-	2902	9	NIC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	178	8381	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	18.719975961523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAATTAGAAGAGAAAAGA	NA	False	NA	NA	False	AATAAA	-9	NA	110918215	110877156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110917914
Isoform_56301_155	chr5	-	2722	9	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	-75	64908	-17	8391	5prime_fragment	FALSE	canonical	3	49	junction_4	4.3517237963823	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAGAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	110918468	110877146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_56302_5	chr5	-	2840	9	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	-193	64908	-3	8391	5prime_fragment	FALSE	canonical	3	49	junction_4	4.3517237963823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAGAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	110918586	110877146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_56303_3	chr5	-	2817	10	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-16	8385	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	22.2466532369908	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAGAAGAGAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	110918467	110877152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110916176_110916279_110918357
Isoform_56304_6	chr5	-	2602	8	ISM	ENSMUSG00000029505.18	ENSMUST00000112436.9	10685	51	127	64903	-5	8391	5prime_fragment	FALSE	canonical	3	7	junction_5	17.3734491306095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAGAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	110918456	110877146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110889835_110889927_110903262_110904633_110918357
Isoform_56306_3	chr5	-	2785	9	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-8	7851	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	22.6591592959668	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTAGGATTCAATGGG	NA	False	NA	NA	False	AATAGA	-28	NA	110918459	110877686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110916176_110916279_110918357
Isoform_56307_15	chr5	-	2274	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	0	1399	0	-1001	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTATTATTGTTGCT	NA	False	NA	NA	False	ATTAAA	-9	NA	110918451	110886936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
Isoform_56308_8	chr5	-	2214	6	ISM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	-7	3	-7	-2	intron_retention	FALSE	canonical	3	62	junction_4	230.873645096187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110928469	110921535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552
Isoform_56309_50	chr5	-	1845	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	20	3	15	-2	multi-exon	FALSE	canonical	3	62	junction_4	212.004454879818	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110928442	110921535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
Isoform_56310_17	chr5	-	1557	7	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	232.058481613771	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928478	110921537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928427
Isoform_56311_47	chr5	-	2161	5	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	-9	4	-9	-3	intron_retention	FALSE	canonical	3	492	junction_3	32.6448694284416	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928471	110921536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552
Isoform_56313_280	chr5	-	1791	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	19	4	14	-3	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928443	110921536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
Isoform_56314_7	chr5	-	2961	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	19	-1166	14	1166	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTGTGTGAGTG	NA	False	NA	-7	True	AATAAA	-11	NA	110928443	110920366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
Isoform_56316_15	chr5	-	1507	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	54	2	-9	-1	multi-exon	FALSE	canonical	3	14	junction_5	204.990146104636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTGCCTATTTTCCT	NA	False	NA	-1	True	ATTAAA	-20	NA	110928471	110921534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
Isoform_56317_166	chr5	-	1486	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	19	5	0	-5	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCTTTGCCTATTT	NA	False	NA	-5	True	ATTAAA	-16	NA	110928462	110921538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
Isoform_5632_11	chr11	-	1250	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	260	1	9	-1	multi-exon	FALSE	canonical	3	26	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTCTCTTTTCTGC	7843	False	NA	-6	True	ATTAAA	-16	NA	60769604	60755278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60756175_60766585_60766874_60769538
Isoform_56320_12	chr5	-	1681	5	NIC	ENSMUSG00000029507.17	novel	1814	6	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	214.321020900891	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928471	110921536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928105
Isoform_56321_11	chr5	-	1366	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	246.215733656483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGCCTATTTTC	NA	False	NA	-3	True	ATTAAA	-18	NA	110928478	110921536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928427
Isoform_5633_346	chr11	-	959	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	497	1	12	-1	multi-exon	FALSE	canonical	3	675	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTCTCTTTTCTGC	7846	False	NA	-6	True	ATTAAA	-16	NA	60769601	60755278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60756175_60769538
Isoform_56332_9	chr5	-	5164	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	48	1	4	-1	multi-exon	TRUE	canonical	3	530	junction_12	186.450389110485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957915	110932354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_56333_6	chr5	-	5245	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-33	1	-33	-1	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957996	110932354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
Isoform_56334_12	chr5	-	772	6	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	141.291754890369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTTCTGCTAATTGG	NA	False	NA	-7	True	AATAAA	-14	NA	110987616	110976945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983840_110983936_110984172_110984270_110987361
Isoform_56335_130	chr5	-	767	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	27	10	27	0	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTTCTGCTAATTGG	NA	False	NA	-7	True	AATAAA	-14	NA	110987616	110976945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
Isoform_56336_79	chr5	-	793	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	1	10	1	0	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTTCTGCTAATTGG	NA	False	NA	-7	True	AATAAA	-14	NA	110987642	110976945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
Isoform_56338_3	chr5	-	743	5	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	-38	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	152.686566206723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987681	110976944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110984172_110984270_110987361
Isoform_56339_23	chr5	-	569	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	27	6783	27	-6772	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGTTCTTTGTAAATC	NA	False	NA	NA	False	TTTAAA	-17	NA	110987616	110983718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_110983936_110984172_110984270_110987361
Isoform_5634_7	chr11	-	1222	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	231	4	-3	-4	multi-exon	FALSE	canonical	3	675	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTCTGTTCTCTTTTC	7580	False	NA	-9	True	ATTAAA	-13	NA	60769867	60755281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60756175_60769538
Isoform_56340_17	chr5	-	1115	7	FSM	ENSMUSG00000029346.13	ENSMUST00000031289.7	1110	7	-4	-1	-4	1	multi-exon	FALSE	canonical	3	22	junction_1	42.3848112207926	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490910	112485256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_112485608_112485841_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_56341_6	chr5	-	1194	7	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.7466473988403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490894	112485256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_112485608_112485841_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_56342_97	chr5	-	1073	7	FSM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-8	-1	-8	1	multi-exon	FALSE	canonical	3	101	junction_3	14.8884742894182	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490894	112485256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_56343_37	chr5	-	1169	7	NIC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	36.3168923046379	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTACAGTGCTGTTT	NA	False	NA	-5	True	AATAGA	-16	NA	112490894	112485255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_56344_3	chr5	-	4054	4	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	101	junction_2	16.5126214353344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490908	112485259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_112485914_112486183_112486339_112487584_112487684_112487762
Isoform_56345_7	chr5	-	1428	6	FSM	ENSMUSG00000029346.13	ENSMUST00000156083.8	837	6	-10	-581	-8	1	multi-exon	FALSE	canonical	3	38	junction_2	39.7461947864195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490894	112485256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
Isoform_56346_3	chr5	-	6516	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	12	5	1	-5	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGTGGCTTGAGGCTG	551	False	NA	-9	True	AATAAA	-13	NA	113163368	113058352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
Isoform_56347_7	chr5	-	4439	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-22	2116	-22	1	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTATTATTTATTTT	517	False	NA	-8	True	ATTAAA	-18	NA	113163402	113060463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
Isoform_56348_4	chr5	-	694	4	ISM	ENSMUSG00000029352.15	ENSMUST00000076069.13	816	5	723	0	447	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.78423336480244	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTGTGTCACTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	113227810	113223704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625
Isoform_56349_13	chr5	-	4330	16	FSM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	10	-1	-4	1	multi-exon	FALSE	canonical	3	35	junction_5	17.3674024156368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAACCGTGGGTCTGG	NA	False	NA	-8	True	AATATA	-11	NA	113428457	113391093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
Isoform_5635_123	chr11	-	3300	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	67	812	67	-812	multi-exon	TRUE	canonical	3	156	junction_2	31	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCTCTCTGCTTTTCT	6691	False	NA	-3	True	ATTAAA	-20	NA	60804571	60793883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_60796948_60797707_60797827_60804454
Isoform_56350_4	chr5	-	4190	17	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	19.3083531146496	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGGTCTGGTTATTT	NA	False	NA	-2	True	AATATA	-17	NA	113428467	113391087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
Isoform_56351_5	chr5	-	1073	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	29	0	29	0	multi-exon	FALSE	canonical	3	70	junction_3	10.6389614154766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGAGTGGTGTCTGTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	113428424	113421817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
Isoform_56352_5	chr5	-	944	6	NNC	ENSMUSG00000042216.14	novel	2274	18	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	27.2176413379264	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGAGAGTGGTGTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	113428454	113421820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
Isoform_56353_3	chr5	-	2737	3	NIC	ENSMUSG00000042190.13	novel	391	5	NA	NA	-34	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGACGTCTTGCTTG	NA	False	NA	-9	True	CATAAA	-42	NA	113781698	113750423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_113753002_113754588_113754678_113781628
Isoform_56354_8	chr5	-	2884	3	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	-11329	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	5615	False	NA	-7	True	CATAAA	-44	NA	113799816	113750421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_113753002_113754588_113754678_113799601
Isoform_56357_360	chr5	-	3591	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	857	-1	-15	1	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTGCATTGCAGCTG	NA	False	NA	-15	True	ATTAAA	-17	NA	113909714	113880505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_56358_7	chr5	-	3825	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	621	1	-251	-1	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909950	113880507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_56360_22	chr5	-	3643	19	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_15	91.6478768621147	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909714	113880507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897388_113899155_113899341_113900889_113900995_113902133_113902261_113909381
Isoform_56363_6	chr5	-	1789	3	NNC	ENSMUSG00000048163.14	novel	1855	2	NA	NA	0	1	intron_retention	TRUE	non_canonical	0	0	junction_1	7	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATAGCTGAGTCCTTCA	6307	False	NA	NA	False	AATAAA	-13	NA	113968533	113956614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_113957698_113957727_113958310_113968409
Isoform_56365_700	chr5	-	3430	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	61	0	8	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046758	113980496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
Isoform_56366_85	chr5	-	3489	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	2	0	2	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046817	113980496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
Isoform_56371_5	chr5	-	3529	10	ISM	ENSMUSG00000042121.17	ENSMUST00000077689.14	3164	14	28083	-512	5096	512	3prime_fragment	FALSE	canonical	3	351	junction_6	37.1556618818255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114099721	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410
Isoform_56372_4	chr5	-	3687	10	ISM	ENSMUSG00000042121.17	ENSMUST00000077689.14	3164	14	27925	-512	4938	512	3prime_fragment	FALSE	canonical	3	351	junction_6	37.1556618818255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114099879	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410
Isoform_56374_114	chr5	-	3745	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	105	4586	-10	512	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114131850	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_56375_4	chr5	-	3315	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	17	5104	17	-6	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCATGTCTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	114131938	114080258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_56376_11	chr5	-	3774	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	76	4586	9	512	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114131879	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_56377_8	chr5	-	3821	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	515	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTCTGAGAACAATGCT	NA	False	NA	-11	True	TATAAA	-17	NA	114111028	114079737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_56378_39	chr5	-	3656	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6049	512	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114110866	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_5638_21	chr11	-	4409	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	23	2	-3	-2	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTCTGCCTCAT	NA	False	NA	-6	True	AATAAA	-18	NA	61065858	61042612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
Isoform_56380_12	chr5	-	3365	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4938	512	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114099879	114079740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
Isoform_56381_3	chr5	-	1437	10	ISM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	111	18192	-4	6107	5prime_fragment	FALSE	canonical	3	321	junction_8	46.3920491272182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	114131844	114093346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
Isoform_56382_5	chr5	-	1348	9	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6043	6107	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	98.9980271268069	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	114110860	114093346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
Isoform_56383_35	chr5	-	2320	9	ISM	ENSMUSG00000042078.15	ENSMUST00000134790.8	1682	15	22266	-1161	-71	-54	3prime_fragment	FALSE	canonical	3	12	junction_8	2.91279504943276	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGGGATTTAAATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	114181013	114165024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
Isoform_56384_3	chr5	-	2966	16	FSM	ENSMUSG00000042078.15	ENSMUST00000058472.13	3379	16	359	54	156	-54	multi-exon	FALSE	canonical	1	1	junction_9	7.27552976307109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATGGGATTTAAATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	114229272	114165024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114229212
Isoform_56385_3	chr5	-	2988	2	ISM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	-14	0	-9	0	intron_retention	FALSE	canonical	3	557	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8006	False	NA	-2	True	AATAAA	-22	NA	114266251	114261986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114262316_114263592
Isoform_56387_4	chr5	-	1207	3	ISM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	11	-6	11	-3	intron_retention	FALSE	canonical	3	542	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGGGGGGGGGTGTGT	7989	False	NA	-5	True	AATAAA	-19	NA	114266268	114261989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114262316_114263592_114263792_114265586
Isoform_56388_4	chr5	-	1133	4	FSM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	-62	2	-20	-2	multi-exon	FALSE	canonical	1	3	junction_3	257.69534122465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGGGGGGTGTGTG	7958	False	NA	-4	True	AATAAA	-20	NA	114266299	114261988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114265936
Isoform_56389_22	chr5	-	1004	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8004	False	NA	-2	True	AATAAA	-22	NA	114266253	114261986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
Isoform_56390_17	chr5	-	1058	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7950	False	NA	-2	True	AATAAA	-22	NA	114266307	114261986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
Isoform_56391_172	chr5	-	878	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	30	-9	-7	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8008	False	NA	-2	True	AATAAA	-22	NA	114266249	114261986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
Isoform_56392_18	chr5	-	3009	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	7	0	7	0	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114411861	114392224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
Isoform_56394_114	chr5	-	3065	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	37	1	12	-1	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCCTTCTGGTCTTTTC	NA	False	NA	1	True	AATAAA	-23	NA	114518532	114501628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
Isoform_56398_19	chr5	-	3103	7	FSM	ENSMUSG00000001098.16	ENSMUST00000001125.6	1026	7	-28	-2049	-3	-6	multi-exon	FALSE	canonical	3	21	junction_4	38.0379927032025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACGCCGCCTTCTGGTC	NA	False	NA	-4	True	AATAAA	-18	NA	114518572	114501633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507092_114508119_114508290_114512956_114513171_114518486
Isoform_5640_10	chr11	-	3198	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	1337	False	NA	NA	False	AATAAA	-12	NA	61158007	61135680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_56400_3	chr5	-	4123	6	NIC	ENSMUSG00000001098.16	novel	3103	7	NA	NA	5	-6	intron_retention	FALSE	canonical	3	101	junction_2	15.8442418562707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACGCCGCCTTCTGGTC	NA	False	NA	-4	True	AATAAA	-18	NA	114518564	114501633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114508290_114512956_114513171_114518486
Isoform_56401_25	chr5	-	2958	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	45	17	6	-17	multi-exon	TRUE	canonical	3	162	junction_1	19.5604032422647	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAGTGCCTGGAAGGA	NA	False	NA	-15	True	AATAAA	-19	NA	114582076	114569111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_56404_3	chr5	-	1168	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-29	138	0	-138	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCCTTCCTTCTGGGT	NA	False	NA	NA	False	AATATA	-19	NA	114582082	114572826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
Isoform_56405_15	chr5	-	3214	16	FSM	ENSMUSG00000014158.13	ENSMUST00000071968.9	3228	16	12	2	9	0	multi-exon	FALSE	canonical	2	11	junction_12	3.23865541373096	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGGGTGAGGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	114796470	114760214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
Isoform_56406_4	chr5	-	3218	16	FSM	ENSMUSG00000014158.13	ENSMUST00000112225.8	3226	16	4	4	4	-1	multi-exon	FALSE	canonical	2	11	junction_12	3.46153466286591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACACAGTGAGGGTGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114796475	114760218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114796402
Isoform_56408_707	chr5	-	1757	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	0	5	0	-5	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTGTCTGTGGCGC	NA	False	NA	-2	True	AATAAA	-24	NA	114829045	114807463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
Isoform_56409_120	chr5	-	1794	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	-38	6	-38	-6	multi-exon	FALSE	canonical	3	1353	junction_4	27.6541136180497	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	NA	False	NA	-3	True	AATAAA	-23	NA	114829083	114807464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
Isoform_5641_3	chr11	-	4012	10	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	15	3	intron_retention	FALSE	canonical	3	23	junction_1	28.0994705806636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTAATTTTGACCT	1348	False	NA	NA	False	AATAAA	-17	NA	61157996	61135675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61137148_61138754_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_56414_20	chr5	-	3025	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911567	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56417_4	chr5	-	5177	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCATGTGCCCCCTC	NA	False	NA	-8	True	AATAAA	-15	NA	114911556	114865472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_5642_3	chr11	-	2712	7	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	4485	2	-365	-2	3prime_fragment	FALSE	canonical	3	69	junction_1	17.2787602435926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	5818	False	NA	NA	False	AATAAA	-12	NA	61153526	61135680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044
Isoform_56420_11	chr5	-	3028	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	-44	0	-11	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911567	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56421_15	chr5	-	2607	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-14	2439	-14	24	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTTGGATTTAAAAAC	NA	False	NA	NA	False	AGTAAA	-19	NA	114911570	114867906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56422_9	chr5	-	2868	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-4	2168	-4	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911560	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56424_6	chr5	-	2877	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911566	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56425_19	chr5	-	2609	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-14	23	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTTGGATTTAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	114911570	114867907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56426_10	chr5	-	2653	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTTGGATTTAAAAAC	NA	False	NA	NA	False	AGTAAA	-19	NA	114911556	114867906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56427_4	chr5	-	2936	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56428_7	chr5	-	2929	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	64.898900483372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911559	114867636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_5643_270	chr11	-	3053	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	36	2	-22	-2	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGTGTGTTAATTTT	1369	False	NA	NA	False	AATAAA	-12	NA	61157975	61135680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_56430_4	chr5	-	2774	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTGATGTCTCCATAA	NA	False	NA	-5	True	TATAAA	-11	NA	114911559	114867638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56431_5	chr5	-	2510	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-11	20	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGAAAGTTGGATTTAA	NA	False	NA	NA	False	AGTAAA	-15	NA	114911567	114867910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56433_6	chr5	-	2787	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-13	2164	-10	0	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911566	114867635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56434_9	chr5	-	691	5	ISM	ENSMUSG00000041890.18	ENSMUST00000153756.8	2091	12	-14	17213	-14	10	5prime_fragment	FALSE	canonical	3	229	junction_4	20.2036506602149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGTCTGCTCAGTTTG	NA	False	NA	NA	False	ATTAAA	-25	NA	114911570	114902592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
Isoform_56435_33	chr5	-	1314	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	17	2	-14	-2	multi-exon	FALSE	canonical	3	46	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTCTGCTGTTCTGT	736	False	NA	-2	True	ATTAAA	-21	NA	114952020	114946258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114947393_114951840
Isoform_56436_27	chr5	-	546	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	29	4	29	-4	multi-exon	FALSE	canonical	3	102	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCCTGTTTTGGCGTCC	779	False	NA	-7	True	NA	NA	NA	114951977	114950857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114951267_114951840
Isoform_56437_62	chr5	-	927	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	19	1	-4	-1	multi-exon	FALSE	canonical	3	282	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTTCTTGTGGGTGA	9612	False	NA	1	True	NA	NA	NA	114961510	114959996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114960787_114961373
Isoform_56439_9	chr5	-	1514	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	19	-586	-4	586	multi-exon	FALSE	canonical	3	282	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTTTGGCGTCCTTC	9612	False	NA	1	True	NA	NA	NA	114961510	114959409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_114960787_114961373
Isoform_56440_4	chr5	-	3005	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	185	1	-38	-1	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAAGCTTCCTGACTG	NA	False	NA	0	True	AGTAAA	-14	NA	115108941	115087039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
Isoform_56441_33	chr5	-	2774	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2233	-7	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	4.34897462017354	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACGTGGAAGCTTCC	7925	False	NA	-6	True	AGTAAA	-8	NA	115111386	115087045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
Isoform_56442_4	chr5	-	2856	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2251	57	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_9	4.34897462017354	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTTTACACATCTTT	7907	False	NA	58	True	NA	NA	NA	115111404	115086981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
Isoform_56445_67	chr5	-	1861	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	9	0	9	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9783	False	NA	-4	True	AATAAA	-18	NA	115257396	115248357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
Isoform_56446_1642	chr5	-	1829	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	41	0	5	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9815	False	NA	-4	True	AATAAA	-18	NA	115257364	115248357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
Isoform_5645_4	chr11	-	3078	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	112	-99	54	99	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGTTGTCATGCTTTT	1445	False	NA	NA	False	NA	NA	NA	61157899	61135579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
Isoform_56451_38	chr5	-	1911	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9815	False	NA	-4	True	AATAAA	-18	NA	115257364	115248357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
Isoform_56453_378	chr5	-	3599	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	48	12	-2	-12	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTCTGACTTGCCTC	NA	False	NA	-2	True	AATAAA	-15	NA	115272986	115260620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
Isoform_56456_102	chr5	-	5952	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	3	0	3	0	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4727	False	NA	-3	True	AATAAA	-16	NA	115296235	115281039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
Isoform_56459_170	chr5	-	1760	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	4	4191	4	934	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTTGAGGACTTGAT	4728	False	NA	-40	True	NA	NA	NA	115296234	115285230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
Isoform_56468_11	chr5	-	1837	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-73	4191	-73	934	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTTGAGGACTTGAT	4651	False	NA	-40	True	NA	NA	NA	115296311	115285230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
Isoform_5647_4	chr11	-	2008	13	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5531	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	6.20651539378848	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGTGCTGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	61227879	61192457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61220586_61220632_61227640
Isoform_56471_7	chr5	-	2205	2	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	27	-1034	intron_retention	FALSE	canonical	3	1224	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4751	False	NA	NA	False	NA	NA	NA	115296211	115287198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_115289054_115295861
Isoform_56472_14	chr5	-	820	3	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	8096	-25	7933	0	3prime_fragment	FALSE	canonical	3	234	junction_2	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	2381	False	NA	-1	True	AATAAA	-20	NA	115311385	115306747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_115307208_115310817_115310966_115311173
Isoform_56475_23	chr5	-	1260	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	108	2	-79	-2	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGGTGGTCCTTGCT	9973	False	NA	-3	True	AATAAA	-18	NA	115324259	115306749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
Isoform_56476_3	chr5	-	1278	7	NNC	ENSMUSG00000029544.17	novel	1370	7	NA	NA	-678	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	88.7926736216952	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	8085	False	NA	-1	True	AATAAA	-20	NA	115333118	115306747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115332913
Isoform_56477_4	chr5	-	1549	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	74	-2	74	2	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGTCCTTGCTTTGT	8837	False	NA	1	True	AATAAA	-22	NA	115332366	115306745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
Isoform_56478_3	chr5	-	1618	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	3	0	3	0	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	8766	False	NA	-1	True	AATAAA	-20	NA	115332437	115306747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
Isoform_56479_12	chr5	-	1083	6	NNC	ENSMUSG00000029544.17	novel	1621	6	NA	NA	-2675	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	79.358931444419	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	7481	False	NA	-1	True	AATAAA	-20	NA	115327042	115306747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115326852
Isoform_5648_12	chr11	-	1965	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5531	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGCTGAGAATATT	NA	False	NA	NA	False	AATAAA	-14	NA	61227879	61192455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
Isoform_56480_35	chr5	-	3106	17	FSM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	338.888480689076	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410951	115379828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_56481_5	chr5	-	3109	17	NIC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_9	471.990052199196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410951	115379828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_56484_290	chr5	-	3109	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	3	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410951	115379828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_56485_21	chr5	-	3109	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	6	361	0	2	multi-exon	FALSE	canonical	3	78	junction_9	376.541410197803	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCCTTCCCGACAAG	NA	False	NA	-23	True	AATAAA	-17	NA	115410951	115379831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
Isoform_56489_28	chr5	-	834	2	FSM	ENSMUSG00000009013.6	ENSMUST00000112090.2	729	2	-22	-83	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115436893_115438571
Isoform_5649_4	chr11	-	2755	11	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5525	-1	intron_retention	FALSE	canonical	2	5	junction_8	5.89915248150105	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGTGCTGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	61227885	61192457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61204584_61216622_61216721_61219353_61219452_61227640
Isoform_56493_2015	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115436893_115438571_115438710_115438890
Isoform_56495_41	chr5	-	686	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	32	1312	32	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115439026	115436480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115436893_115438571_115438710_115438890
Isoform_56498_27	chr5	-	701	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	367	junction_2	1708.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115436893_115438571_115438710_115438842
Isoform_5650_6	chr11	-	2660	17	FSM	ENSMUSG00000010122.15	ENSMUST00000010267.10	2639	17	-26	5	-26	-4	multi-exon	FALSE	canonical	2	6	junction_16	9.25675429078681	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTCTGGGCTGTAGAT	NA	False	NA	-6	True	ATTAAA	-13	NA	61268933	61234231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61258498_61258544_61260076_61260120_61260943_61261093_61262581_61262651_61264180_61264283_61268738
Isoform_56500_4	chr5	-	2165	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	4	-372	4	372	multi-exon	FALSE	canonical	3	122	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAATAAAATAA	9713	False	NA	NA	False	NA	NA	NA	115479233	115470925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115472654_115473525_115473630_115478900
Isoform_56507_2639	chr5	-	534	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	25	12	25	3	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	2639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCGTGAGCTGGACG	4879	False	NA	-38	True	AATAAA	-14	NA	115487015	115483712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115483986_115486623_115486767_115486897
Isoform_56510_21	chr5	-	1428	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	363	3	4	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAATGTGTGGACTGTG	9383	False	NA	NA	False	AATAAA	-16	NA	115622421	115616071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
Isoform_56511_8	chr5	-	1874	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTGCCTCAGTTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115791045	115786235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115787629_115789877_115789999_115790685
Isoform_56512_8	chr5	-	1980	3	NNC	ENSMUSG00000041609.17	novel	1874	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTCAGTTCCTGGGT	NA	False	NA	1	True	AATAAA	-18	NA	115791045	115786231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_115787629_115789877_115789999_115790583
Isoform_56515_46	chr5	-	2064	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	9	16	-2	-12	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTGGAGTAACTTT	NA	False	NA	-16	True	AATAAA	-9	NA	116162512	116151660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
Isoform_56516_164	chr5	-	1956	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	58	12	1	-12	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTGGAGTAACTTT	NA	False	NA	-16	True	AATAAA	-9	NA	116162509	116151660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
Isoform_56518_5	chr5	-	1842	7	FSM	ENSMUSG00000029513.15	ENSMUST00000148208.2	794	7	0	-1048	0	-12	multi-exon	FALSE	canonical	2	5	junction_3	82.0135490161365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTGGAGTAACTTT	NA	False	NA	-16	True	AATAAA	-9	NA	116162510	116151660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158432_116158527_116159541_116159706_116162149_116162319_116162423
Isoform_5652_8	chr11	-	2984	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-27	-8	intron_retention	FALSE	canonical	3	13	junction_4	77.5234731477434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGACTCTGCGTCATT	NA	False	NA	-7	True	AATACA	-11	NA	61385041	61379645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384472_61384781_61384905
Isoform_56520_155	chr5	-	1815	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-2	3	-2	-3	multi-exon	FALSE	canonical	3	315	junction_2	24.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	-3	True	AATAAA	-17	NA	116560925	116546552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_116547550_116553465_116553530_116560171
Isoform_56521_37	chr5	-	1937	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-124	3	-124	-3	multi-exon	FALSE	canonical	3	315	junction_2	24.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGCTTCATTTAG	NA	False	NA	-3	True	AATAAA	-17	NA	116561047	116546552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_116547550_116553465_116553530_116560171
Isoform_56522_4	chr5	-	1205	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	5511	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATGTTGTGCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	116548440	116546555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_116547550_116548229
Isoform_56523_25	chr5	-	2313	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	135	-754	20	2	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117254043	117229747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_56524_25	chr5	-	2292	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	158	-756	43	-1	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCACGTGGTCTGTTT	NA	False	NA	-5	True	GATAAA	-17	NA	117254020	117229745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_56525_31	chr5	-	1530	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	164	0	49	0	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254014	117230501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_56528_398	chr5	-	2373	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	49	3	49	2	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117254014	117229747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_56529_23	chr5	-	1826	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	-158	757	-43	0	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254221	117230501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_5653_6	chr11	-	3682	5	ISM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	3	6	3	-6	intron_retention	FALSE	canonical	3	217	junction_3	15.1224171348366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385089	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729
Isoform_56532_20	chr5	-	2567	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	-143	1	-28	-1	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCACGTGGTCTGTTT	NA	False	NA	-5	True	GATAAA	-17	NA	117254206	117229745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_56539_12	chr5	-	2684	10	NIC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	62	0	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254001	117230501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
Isoform_5654_13	chr11	-	3113	7	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	11	-6	intron_retention	FALSE	canonical	3	31	junction_5	75.7840499196382	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385081	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331_61384781_61384905
Isoform_56542_2788	chr5	-	1204	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	39	-3	-3	3	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	2788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTATTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-18	NA	117425651	117420715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
Isoform_56543_176	chr5	-	1234	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	7	-1	7	1	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGGGTATTTCCTTC	NA	False	NA	-16	True	AATAAA	-16	NA	117425683	117420717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
Isoform_56549_1004	chr5	-	1725	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	25	1046	0	468	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527087	117517213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_5655_16	chr11	-	3083	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	27	-2	intron_retention	FALSE	canonical	3	42	junction_5	71.8410668690888	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCGTCATTTTTGGG	NA	False	NA	-1	True	AATACA	-17	NA	61385065	61379639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384781_61384905
Isoform_56550_120	chr5	-	2469	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	25	302	0	0	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGAGGCGTCT	NA	False	NA	NA	False	AATATA	-16	NA	117527087	117516469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_56555_40	chr5	-	1765	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	-15	1046	-15	468	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527127	117517213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
Isoform_56567_582	chr5	-	3318	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	32	1650	-6	-1650	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGTGCTGCTCCT	NA	False	NA	-31	True	ATTAAA	-14	NA	118293497	118204679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
Isoform_5657_11	chr11	-	2994	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	69	6	39	-6	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385053	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
Isoform_56571_3	chr5	-	4335	11	FSM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	91	5	-31	-5	multi-exon	FALSE	canonical	3	9	junction_8	4.80520551069359	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAACTTGTATCTGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	118383090	118328811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381097_118383036
Isoform_56572_3	chr5	-	1200	8	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5500	3	50	-3	3prime_fragment	FALSE	canonical	1	1	junction_2	1.82946406783796	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGGCTCCCTGGG	7203	False	NA	NA	False	AATAAA	-12	NA	120605375	120596269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
Isoform_56573_550	chr5	-	2219	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	1965	0	0	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	NA	False	NA	-5	True	NA	NA	NA	120641666	120623311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_56574_89	chr5	-	2709	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	1475	0	490	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTCTGGTTATTGTATC	NA	False	NA	-2	True	NA	NA	NA	120641666	120622821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_56575_65	chr5	-	3567	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	24	617	0	-617	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGGAAAAGTGCACATTA	NA	False	NA	-6	True	NA	NA	NA	120641666	120621963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
Isoform_5658_17	chr11	-	3104	6	ISM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	40	0	10	0	intron_retention	FALSE	canonical	3	175	junction_5	27.8107892732299	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385082	61379637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472
Isoform_56580_4	chr5	-	4629	29	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	-28	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.27545835385914	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGGCTGCAGCCTTTGA	9216	False	NA	-3	True	AATAAA	-18	NA	120726705	120672221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_120672415_120672460_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
Isoform_56581_8	chr5	-	2783	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	33	1896	-28	-1896	multi-exon	FALSE	canonical	2	12	junction_13	5.06365515872966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGGGAACCATGTGTGT	9216	False	NA	NA	False	NA	NA	NA	120726705	120674113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
Isoform_56582_7	chr5	-	2692	2	FSM	ENSMUSG00000032741.10	ENSMUST00000202072.2	2622	2	-69	-1	10	1	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9193	False	NA	NA	False	NA	NA	NA	120726728	120720962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120723494_120726567
Isoform_56583_4	chr5	-	849	3	NNC	ENSMUSG00000029600.11	novel	712	3	NA	NA	-1233	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCAGTCCTGATACTC	9611	False	NA	-3	True	NA	NA	NA	120745015	120740168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_120740583_120742274_120742313_120744618
Isoform_56584_3	chr5	-	2638	3	ISM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-775	4	-775	-4	intron_retention	FALSE	canonical	2	10	junction_2	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5540	False	NA	NA	False	ATTAAA	-16	NA	120751429	120747126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_120748028_120749442_120749795_120750044
Isoform_56585_9	chr5	-	2440	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-775	3	-775	-3	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGTAGTGTGTTACTT	5540	False	NA	NA	False	ATTAAA	-17	NA	120751429	120747125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
Isoform_56587_16	chr5	-	2343	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-775	5	-775	-5	multi-exon	FALSE	canonical	3	77	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCGGTAGTGTGTTAC	5540	False	NA	NA	False	ATTAAA	-15	NA	120751429	120747127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120748028_120749442_120749795_120750338
Isoform_56588_51	chr5	-	1550	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	20	3	1	-3	multi-exon	FALSE	canonical	3	77	junction_2	1.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGTAGTGTGTTACTT	6335	False	NA	NA	False	ATTAAA	-17	NA	120750634	120747125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120748028_120749442_120749795_120750338
Isoform_56592_23	chr5	-	1907	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11945	0	-543	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821523	120818267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
Isoform_56601_15	chr5	-	3755	10	FSM	ENSMUSG00000029603.16	ENSMUST00000031607.7	4035	10	278	2	278	-1	multi-exon	FALSE	canonical	1	2	junction_8	46.8325095485741	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGCCTTTTTCTGCCA	NA	False	NA	-20	True	AATAAA	-14	NA	120849714	120818268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
Isoform_56603_11	chr5	-	2777	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1090	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	41.4123698307643	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTTTTTCTGCCAAG	NA	False	NA	-18	True	AATAAA	-16	NA	120834558	120818266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120834452
Isoform_56605_3	chr5	-	3407	9	ISM	ENSMUSG00000032690.17	ENSMUST00000053909.13	3869	11	3815	3	3815	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCCTGACTGTCCTGGA	9056	False	NA	NA	False	NA	NA	NA	120884103	120868400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_120870024_120871478_120871633_120873044_120873284_120874061_120874250_120876359_120876643_120876734_120876909_120879213_120879359_120881109_120881349_120883741
Isoform_56606_22	chr5	-	1426	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-29	580	2	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025674	121014784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
Isoform_56607_35	chr5	-	1400	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-6	583	-6	-3	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTGTGAACTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121025651	121014787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
Isoform_5661_85	chr11	-	2944	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	69	6	39	-6	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385053	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
Isoform_56612_293	chr5	-	1403	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	19	463	19	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045565	121034781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
Isoform_56613_7	chr5	-	1462	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	19	-466	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_4	248.197949673687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTGTGAACTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121045565	121034784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039870_121040118_121043658_121043948_121045356
Isoform_56616_8	chr5	-	5611	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	-15	3	-15	-1	multi-exon	TRUE	canonical	3	69	junction_6	9.90263713473448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCATTTGGTCTGT	837	False	NA	-3	True	AATAAA	-20	NA	121329475	121268598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
Isoform_56617_7	chr5	-	5635	16	FSM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	-95	-5	-27	-1	multi-exon	FALSE	non_canonical	0	0	junction_6	23.8687149959011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCATTTGGTCTGT	825	False	NA	-3	True	AATAAA	-20	NA	121329487	121268598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282760_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
Isoform_5662_3	chr11	-	2917	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-49	-6	intron_retention	FALSE	canonical	1	1	junction_6	86.7558835660921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385281	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61385160
Isoform_56621_16	chr5	-	2478	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	20	5	17	0	multi-exon	FALSE	canonical	3	16	junction_2	8.79894809640935	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCTTGTGATTCTTTC	3589	False	NA	-4	True	AATAAA	-14	NA	121523675	121509792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_56622_10	chr5	-	2470	12	FSM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	-41	-4	17	-1	multi-exon	FALSE	canonical	3	6	junction_2	10.9499235817553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	3589	False	NA	0	True	AATAAA	-18	NA	121523675	121509788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_56623_7	chr5	-	2273	12	NIC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	23	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	10.4920276700026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGTGATTCTTTCTA	3595	False	NA	-2	True	AATAAA	-16	NA	121523669	121509790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121510476_121510665_121510739_121511401_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
Isoform_56625_218	chr5	-	1241	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	34	3929	15	3	multi-exon	FALSE	canonical	3	820	junction_1	20.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTTTTTAGATA	3246	False	NA	-38	True	AATAAA	-17	NA	121590535	121582815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121583636_121585203_121585343_121590253
Isoform_56627_8	chr5	-	1120	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	4	-1	4	1	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTTTCTTTTTAGA	3226	False	NA	-40	True	AATAAA	-15	NA	121590555	121582817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121583636_121590253
Isoform_56628_67	chr5	-	2010	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	186	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.6505128115793	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683782	121663114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_56629_6	chr5	-	2231	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	-33	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	58.6505128115793	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTTAAAGTTGCTATA	NA	False	NA	-8	True	AATAAA	-18	NA	121684001	121663112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_5663_3	chr11	-	3054	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-36	-9	intron_retention	FALSE	canonical	3	10	junction_5	83.3534975604237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTGACTCTGCGTCAT	NA	False	NA	-8	True	AATACA	-10	NA	61385050	61379646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384012_61384472_61384781_61384905
Isoform_56634_16	chr5	-	2002	15	NNC	ENSMUSG00000029454.16	novel	1513	14	NA	NA	188	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	64.1970817570585	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683780	121663114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_56636_4	chr5	-	2233	15	NNC	ENSMUSG00000029454.16	novel	1513	14	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.1970817570585	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121684011	121663114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683715_121683738
Isoform_5664_7	chr11	-	3514	6	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-34	-8	intron_retention	FALSE	canonical	3	192	junction_5	22.1178660815188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGACTCTGCGTCATT	NA	False	NA	-7	True	AATACA	-11	NA	61385048	61379645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384781_61384905
Isoform_56642_1725	chr5	-	1942	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	244	1681	0	170	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGGGGTCAGTTCTC	NA	False	NA	-28	True	AATAAA	-14	NA	121731643	121705770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
Isoform_56643_230	chr5	-	1967	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	219	1681	-23	170	multi-exon	FALSE	canonical	3	476	junction_10	93.9036148872283	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGGGGTCAGTTCTC	NA	False	NA	-28	True	AATAAA	-14	NA	121731668	121705770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
Isoform_5665_3	chr11	-	3621	5	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-36	-6	intron_retention	FALSE	canonical	3	192	junction_4	24.0883789408918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACTCTGCGTCATTTT	NA	False	NA	-5	True	AATACA	-13	NA	61385050	61379643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61384781_61384905
Isoform_56653_5	chr5	-	2334	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	45	1502	-30	-1372	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCATCTATGGCTTTC	NA	False	NA	NA	False	GATAAA	-20	NA	121756956	121736339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_56654_49	chr5	-	3598	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	28	0	-7	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798549	121759090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
Isoform_56656_3	chr5	-	3657	21	NIC	ENSMUSG00000029456.13	novel	3826	21	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	15.036954478883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTATATCCTGTTCTGA	NA	False	NA	-14	True	NA	NA	NA	121798574	121759097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794318_121798355
Isoform_56657_4	chr5	-	4357	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	-1	-161	-1	1	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACCATGATCTCTGCA	NA	False	NA	-19	True	ATTAAA	-14	NA	121974923	121953549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_56658_5	chr5	-	2601	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	32	1562	-2	6	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTAGGACCCCCCTGTCA	NA	False	NA	66	True	ATTAAA	-20	NA	121974890	121955272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_56659_7	chr5	-	2559	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	1	1635	1	7	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTACTTTTTTTTGTTTTG	NA	False	NA	-7	True	TTTAAA	-13	NA	121974921	121955345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
Isoform_56660_3	chr5	-	4132	9	NIC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_8	20.6877832306896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTACAACCATGATCTCT	NA	False	NA	-22	True	ATTAAA	-11	NA	121975725	121953552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121975636
Isoform_56661_16	chr5	-	4284	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-23	-1731	-14	3	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGATCTCTGCATC	NA	False	NA	-17	True	ATTAAA	-16	NA	121974936	121953547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_56667_5	chr5	-	2318	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-9	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	16.67088382021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGGACCCCCCTGTCAC	NA	False	NA	67	True	ATTAAA	-21	NA	121975718	121955271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_56668_10	chr5	-	2253	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-18	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	16.67088382021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTACTTTTTTTTGTTTTG	NA	False	NA	-7	True	TTTAAA	-13	NA	121975727	121955345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_56669_3	chr5	-	2561	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	-48	1800	-14	2	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGAGTACTTTTTTTTG	NA	False	NA	-12	True	TTTAAA	-8	NA	121974936	121955350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
Isoform_5667_6	chr11	-	4244	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470512	61408074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
Isoform_56670_3	chr5	-	2315	7	NIC	ENSMUSG00000042594.17	novel	4313	7	NA	NA	-18	-11	intron_retention	FALSE	canonical	3	8	junction_6	16.86877457184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACATTTTACCTCAGA	NA	False	NA	-25	True	NA	NA	NA	121975727	121955363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
Isoform_56671_9	chr5	-	1979	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	58	3680	13	-241	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTACTCTGCTGGGCTG	NA	False	NA	-7	True	TTTAAA	-10	NA	122402465	122379590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_56672_5	chr5	-	4037	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	33	1647	-12	-1647	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTAAGTTCATTTGA	NA	False	NA	-1	True	AATAAA	-16	NA	122402490	122377557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
Isoform_56674_142	chr5	-	1396	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	-11	3	-11	-3	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAATTTTAAATTATC	NA	False	NA	-23	True	ATTAAA	-18	NA	122510438	122502645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
Isoform_5668_4	chr11	-	4373	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470509	61408077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
Isoform_56685_313	chr5	-	4477	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	17	-8	17	8	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAACTGTCTTGTTCTT	7294	False	NA	-20	True	AATAAA	-21	NA	122640271	122594394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
Isoform_56689_16	chr5	-	4554	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-64	-4	-64	4	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAATAACTGTCTTGT	7213	False	NA	-24	True	AATAAA	-17	NA	122640352	122594398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
Isoform_56695_5	chr5	-	2967	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-4	-13	-4	13	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTTTGCTTCAGTCT	1239	False	NA	NA	False	ATTAAA	-33	NA	122752585	122688253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
Isoform_56696_10	chr5	-	2654	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-1	297	-1	-293	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATAGTTGTGTCAAG	1242	False	NA	-6	True	AATAAA	-34	NA	122752582	122688563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
Isoform_56698_4	chr5	-	2510	17	NIC	ENSMUSG00000029471.14	novel	4861	17	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	27.0525385823586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	4616	False	NA	NA	False	NA	NA	NA	122917479	122871268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902017_122902322_122902366_122917314
Isoform_56700_27	chr5	-	2791	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-55	15	-6	1	multi-exon	TRUE	canonical	3	10	junction_2	25.1434992702996	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4644	False	NA	NA	False	NA	NA	NA	122917451	122871265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56701_3	chr5	-	2880	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-144	15	-68	1	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4555	False	NA	NA	False	NA	NA	NA	122917540	122871265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56703_14	chr5	-	2667	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	6	1	intron_retention	FALSE	canonical	3	5	junction_2	23.9604265574786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4639	False	NA	NA	False	NA	NA	NA	122917456	122871265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56706_65	chr5	-	2040	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	8	2732	8	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4641	False	NA	-22	True	AATAAA	-16	NA	122917454	122881413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56707_3	chr5	-	2130	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	-83	2733	-73	-2733	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTTGGAATGTCACTCAG	4550	False	NA	-23	True	AATAAA	-15	NA	122917545	122881414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56709_12	chr5	-	1143	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	-63	4	-6	-4	multi-exon	FALSE	canonical	3	71	junction_1	7.3824115301167	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGAGTTAGCAGTG	4644	False	NA	-4	True	AATAAA	-17	NA	122917451	122894342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
Isoform_56710_3	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_56711_74	chr5	-	2400	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	14	-10	0	0	multi-exon	TRUE	canonical	3	855	junction_8	345.39967790952	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959343	122925783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_56712_8	chr5	-	2408	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	1	4	0	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959342	122925789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_56713_117	chr5	-	2432	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	59	269	0	-1	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGAAGTGGGTTTTTT	NA	False	NA	-24	True	AATAAA	-15	NA	122959343	122925790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_56715_46	chr5	-	1419	7	FSM	ENSMUSG00000029472.14	ENSMUST00000200058.5	1174	7	-262	17	0	-17	multi-exon	FALSE	canonical	3	1753	junction_2	189.823382823789	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAGAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-9	NA	122959343	122943923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_56716_30	chr5	-	2285	6	NIC	ENSMUSG00000029472.14	novel	1174	7	NA	NA	-2	-17	intron_retention	FALSE	canonical	3	1753	junction_1	207.934027999267	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAGAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-9	NA	122959345	122943923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
Isoform_5672_3	chr11	-	4273	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470506	61408076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
Isoform_56720_200	chr5	-	3533	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	-11	10	-11	1	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	8583	False	NA	NA	False	TATAAA	-11	NA	123038429	123008740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
Isoform_56723_57	chr5	-	3635	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	1	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	NA	False	NA	NA	False	TATAAA	-11	NA	123060200	123008740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
Isoform_56726_5	chr5	-	1937	5	FSM	ENSMUSG00000029449.12	ENSMUST00000031401.6	2208	5	267	4	4	-4	multi-exon	TRUE	canonical	1	1	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCATGTAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123270488	123256244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123257658_123258358_123258494_123258573_123258684_123269929_123270018_123270297
Isoform_56727_5	chr5	-	2029	5	ISM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	43	193	0	-193	intron_retention	FALSE	canonical	3	603	junction_3	28.8736471544556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCAGGCTGTCCTGCAG	8965	False	NA	-3	True	ATTAAA	-26	NA	123662196	123649960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317
Isoform_56728_109	chr5	-	1359	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	18	199	-15	-199	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8940	False	NA	-9	True	ATTAAA	-20	NA	123662221	123649966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_5673_28	chr11	-	4224	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-17	0	-15	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470528	61408074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
Isoform_56730_56	chr5	-	1550	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	18	8	-15	-8	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGACCAGTTTTCA	8940	False	NA	-20	True	AATAAA	-17	NA	123662221	123649775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_56731_3	chr5	-	2452	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-12	-1759	-2	-24	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAGAAAGAA	8953	False	NA	NA	False	NA	NA	NA	123662208	123653889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_56732_9	chr5	-	681	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	1	-1	1	1	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAACATTATTTCCTTG	8966	False	NA	NA	False	NA	NA	NA	123662195	123655647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_56733_14	chr5	-	2586	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	-22	24	-15	-24	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAAGAAAGAA	8940	False	NA	NA	False	NA	NA	NA	123662221	123653889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
Isoform_56735_104	chr5	-	3752	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	40	443	-19	-443	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9973	False	NA	-11	True	ATTAAA	-20	NA	123711061	123667164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
Isoform_56736_8	chr5	-	5550	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	40	-1355	-19	1355	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGCAAGTGTCCCTTTG	9973	False	NA	-4	True	NA	NA	NA	123711061	123665366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
Isoform_56738_5	chr5	-	3032	14	ISM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	287	39910	-6	1	5prime_fragment	FALSE	canonical	3	32	junction_5	8.18860515825924	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATGAAGAAGAAAAGAA	9896	False	NA	NA	False	NA	NA	NA	123822394	123755767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_56739_5	chr5	-	2822	14	ISM	ENSMUSG00000049550.18	ENSMUST00000111564.8	5609	24	-19	39902	-16	9	5prime_fragment	FALSE	canonical	3	18	junction_5	9.92635604734679	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAAAGAAAGAGTTGG	9886	False	NA	NA	False	AAAACA	-4	NA	123822404	123755759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
Isoform_56744_12	chr5	-	2743	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	76	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACTTGGGTAGATAT	6473	False	NA	-3	True	AATAAA	-20	NA	123859031	123837826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857590_123858782
Isoform_56745_81	chr5	-	2807	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	17	1462	17	35	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACTTGGGTAGATAT	6414	False	NA	-3	True	AATAAA	-20	NA	123859090	123837826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
Isoform_56746_551	chr5	-	2723	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	101	1462	-81	35	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACTTGGGTAGATAT	6498	False	NA	-3	True	AATAAA	-20	NA	123859006	123837826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
Isoform_56755_16	chr5	-	2718	14	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-81	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAACCAAGACTTGGGT	6498	False	NA	-9	True	AATAAA	-14	NA	123859006	123837832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857599_123858785
Isoform_56758_23	chr5	-	1843	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	36	-284	2	1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGTGTTAATTTAAGT	4357	False	NA	-7	True	AATAAA	-14	NA	123887441	123866785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_56759_9	chr5	-	2168	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	7	-580	5	-1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATTGTATGCTATTTG	4328	False	NA	NA	False	AATAAA	-14	NA	123887470	123866489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_56761_12	chr5	-	838	6	ISM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	4	7552	2	56	5prime_fragment	FALSE	canonical	3	403	junction_3	55.0730424073339	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATCTTTTCCCATGT	4325	False	NA	NA	False	NA	NA	NA	123887473	123874621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
Isoform_56762_3	chr5	-	909	7	ISM	ENSMUSG00000029422.16	ENSMUST00000182015.8	942	8	0	2956	0	56	5prime_fragment	FALSE	canonical	3	64	junction_3	193.699652956725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATCTTTTCCCATGT	4354	False	NA	NA	False	NA	NA	NA	123887444	123874621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
Isoform_56766_3	chr5	-	2000	3	FSM	ENSMUSG00000029422.16	ENSMUST00000183253.8	1980	3	-26	6	5	-4	multi-exon	FALSE	canonical	3	434	junction_2	57.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	4328	False	NA	NA	False	NA	NA	NA	123887470	123880017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123881742_123883017_123883175_123887351
Isoform_56768_303	chr5	-	2528	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2230	False	NA	-1	True	AATAAA	-20	NA	124170339	124142703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
Isoform_56769_4	chr5	-	3194	20	ISM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-3	8267	0	3	5prime_fragment	FALSE	canonical	3	31	junction_18	7.68385002759277	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATCTTTTCCTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	124465915	124398999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
Isoform_56772_14	chr5	-	1163	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	129	23	129	-23	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTATTACGATGTG	4383	False	NA	-21	True	AATAAA	-15	NA	124492605	124483502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
Isoform_56774_37	chr5	-	1118	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	174	23	174	-23	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTATTACGATGTG	4428	False	NA	-21	True	AATAAA	-15	NA	124492560	124483502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
Isoform_56778_8	chr5	-	2482	18	Fusion	ENSMUSG00000038095.16_ENSMUSG00002076658.1	novel	4170	31	NA	NA	0	-9	multi-exon	TRUE	canonical	3	34	junction_15	129.531762547456	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGATAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124563647	124531039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
Isoform_56779_25	chr5	-	2386	17	FSM	ENSMUSG00000038095.16	ENSMUST00000200474.5	2413	17	0	27	0	-9	multi-exon	FALSE	canonical	3	85	junction_15	101.972863271314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGATAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124563656	124531039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
Isoform_56780_4	chr5	-	2322	17	NIC	ENSMUSG00000038095.16	novel	2511	18	NA	NA	-20	-14	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	144.76446387149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAAAGCAAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	124563997	124531044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563909
Isoform_56781_28	chr5	-	2501	18	ISM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	10	24269	-7	-9	5prime_fragment	FALSE	canonical	3	126	junction_15	113.969157486276	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGATAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124563663	124531039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
Isoform_56782_7	chr5	-	2412	18	FSM	ENSMUSG00000038095.16	ENSMUST00000196644.5	2511	18	90	9	3	-9	multi-exon	FALSE	canonical	3	24	junction_17	149.186374694419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGATAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124563974	124531039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
Isoform_56783_54	chr5	-	2394	17	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	3	243	junction_15	68.5428413019916	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGATAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124563661	124531039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
Isoform_56791_5	chr5	-	584	2	ISM	ENSMUSG00000038095.16	ENSMUST00000196711.5	772	5	-14	6999	-5	-3755	5prime_fragment	FALSE	canonical	3	427	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124563661	124552158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124552591_124563509
Isoform_56792_23	chr5	-	1378	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	9	4	9	-4	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATACAACGCATGTGTAT	NA	False	NA	44	True	AATAAA	-20	NA	124616420	124601331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
Isoform_56793_16	chr5	-	2314	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	-66	1	-66	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTCCTGTGTGCCTT	NA	False	NA	1	True	NA	NA	NA	124669520	124631143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_56794_54	chr5	-	2242	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	6	1	6	-1	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTCCTGTGTGCCTT	NA	False	NA	1	True	NA	NA	NA	124669448	124631143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_56795_3	chr5	-	2877	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	-35	-593	-35	593	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGCTTTGTGATGGTT	NA	False	NA	NA	False	NA	NA	NA	124669489	124630549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_56796_7	chr5	-	1292	4	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	16	21343	16	-20759	5prime_fragment	FALSE	canonical	3	33	junction_1	7.11805216802087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAATGTGTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124669438	124652485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124652807_124653580_124653700_124659313_124659465_124668737
Isoform_56798_24	chr5	-	1765	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	6	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717089	124708715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
Isoform_56799_426	chr5	-	1510	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	63	440	-7	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717131	124708715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
Isoform_5680_4	chr11	-	3441	8	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470508	61408075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
Isoform_56804_7	chr5	-	1397	8	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	-17	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	286.265967382839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717155	124708715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124716499_124716602_124717063
Isoform_56806_7	chr5	-	1519	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	6	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	226.339761199839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717089	124708715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711869_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
Isoform_56807_6	chr5	-	1771	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	227	-562	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTTTCCTCCGAGTCT	NA	False	NA	-2	True	NA	NA	NA	124939261	124912043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
Isoform_56810_208	chr5	-	2233	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	227	13	227	-13	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACTAGATG	NA	False	NA	NA	False	NA	NA	NA	124939261	124911494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
Isoform_56812_36	chr5	-	2508	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	-48	13	-48	-13	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACTAGATG	NA	False	NA	NA	False	NA	NA	NA	124939536	124911494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
Isoform_56816_5	chr5	-	2136	7	ISM	ENSMUSG00000029478.17	ENSMUST00000125053.8	5672	27	17610	12	-141	-3	3prime_fragment	FALSE	canonical	3	114	junction_3	12.3378370155478	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	4068	False	NA	-10	True	AATATA	-7	NA	125102266	125094228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072
Isoform_56817_3	chr5	-	2262	8	ISM	ENSMUSG00000029478.17	ENSMUST00000125053.8	5672	27	17272	9	-18	0	3prime_fragment	FALSE	canonical	3	108	junction_7	13.840195822609	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	3730	False	NA	-7	True	AATATA	-10	NA	125102604	125094225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481
Isoform_56820_235	chr5	-	2504	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	10	7	10	-5	multi-exon	FALSE	canonical	3	188	junction_1	171.680966232913	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAACACTGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	125418148	125354157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_56824_173	chr5	-	2401	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-33	-1	-10	-1	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTTCTGTGACTGT	NA	False	NA	-2	True	AATAAA	-20	NA	125418168	125354151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_56825_602	chr5	-	2378	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-10	-1	-10	-1	multi-exon	TRUE	canonical	3	487	junction_1	58.8981471316135	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCTTCTGTGACTGT	NA	False	NA	-2	True	AATAAA	-20	NA	125418145	125354151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_56829_31	chr5	-	2172	11	FSM	ENSMUSG00000037936.16	ENSMUST00000148373.8	2082	11	-65	-25	10	25	multi-exon	FALSE	canonical	3	583	junction_7	41.8812607260097	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATTTAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	125418148	125360393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
Isoform_56833_60	chr5	-	4213	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	0	547	0	383	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511185	125491468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_56834_9	chr5	-	4743	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	21	-4	21	4	multi-exon	TRUE	canonical	3	122	junction_21	17.4191708985502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCTCTTGATCATGT	NA	False	NA	NA	False	AGTAAA	-20	NA	125511164	125490917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
Isoform_56839_30	chr5	-	2655	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	21	-3	-16	0	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694461	127672727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
Isoform_56840_68	chr5	-	2734	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	-2	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694482	127672727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
Isoform_56842_21	chr5	-	2916	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	14	9	-11	-3	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAATCGTTTGTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	129085624	129061629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_56843_34	chr5	-	2892	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	38	9	-1	-3	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAAATCGTTTGTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	129085600	129061629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
Isoform_56844_7	chr5	-	3633	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	8	288	8	-288	multi-exon	TRUE	canonical	3	10	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCATTTATACATTTGG	NA	False	NA	NA	False	AATAAA	-22	NA	129747155	129731944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129735450_129737833_129737930_129747123
Isoform_56846_1506	chr5	-	1152	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8199	5	-37	-5	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGATTCAGTAGTTTTA	NA	False	NA	-7	True	ATTAAA	-17	NA	129856314	129842626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
Isoform_56848_43	chr5	-	1471	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	257	5	15	-5	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGATTCAGTAGTTTTA	9014	False	NA	-7	True	ATTAAA	-17	NA	129864256	129842626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
Isoform_56855_5	chr5	-	2331	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4995	14	17	-14	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAGGATTT	NA	False	NA	NA	False	NA	NA	NA	129902929	129892275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
Isoform_56856_3	chr5	-	2244	10	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-1179	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.58653778449403	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGATTTA	NA	False	NA	NA	False	NA	NA	NA	129904125	129892274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129903062_129903180_129904089
Isoform_56857_3	chr5	-	2248	9	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-11	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	4.49305018890286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGATTTA	NA	False	NA	NA	False	NA	NA	NA	129902957	129892274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129902800
Isoform_5686_34	chr11	-	1940	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTCTGTATGTGGATA	230	False	NA	-11	True	AATAAA	-18	NA	61652900	61620483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
Isoform_56862_2348	chr5	-	730	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	181	4	-16	-1	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	2348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGTAGCGTCCTTA	2245	False	NA	-7	True	AATAAA	-14	NA	129916130	129910000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
Isoform_56863_139	chr5	-	779	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	132	4	-65	-1	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGTAGCGTCCTTA	2196	False	NA	-7	True	AATAAA	-14	NA	129916179	129910000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
Isoform_56865_3	chr5	-	1220	4	ISM	ENSMUSG00000025534.18	ENSMUST00000201801.4	2272	11	7140	0	-5046	0	3prime_fragment	FALSE	canonical	3	97	junction_3	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	130024529	130017863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287
Isoform_56866_241	chr5	-	2495	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	182	10	-2	2	multi-exon	TRUE	canonical	3	83	junction_6	16.6092675514317	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	130031708	130017861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
Isoform_56870_13	chr5	-	1712	16	FSM	ENSMUSG00000025533.16	ENSMUST00000160129.8	2413	16	696	5	-6	-5	multi-exon	FALSE	canonical	1	102	junction_3	47.1472398155207	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCGAGACAAGCATATGCT	NA	False	NA	-15	True	AATAAA	-16	NA	130053164	130040349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
Isoform_56871_5	chr5	-	1626	17	NIC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	7	junction_16	77.2141654345237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCGAGACAAGCATATGCT	NA	False	NA	-15	True	AATAAA	-16	NA	130053189	130040349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053048
Isoform_56872_206	chr5	-	1549	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	36	239	0	-2	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCTTCTGCCTGTGGT	NA	False	NA	-3	True	AATAAA	-28	NA	130053186	130040337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
Isoform_56873_7	chr5	-	1792	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	29	3	-7	-3	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAGAGATGTGTC	NA	False	NA	NA	False	CATAAA	-18	NA	130053193	130040101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
Isoform_56876_6	chr5	-	1385	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-25	-4	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	356.535411985962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGGCTTGCATTTC	NA	False	NA	-4	True	AATAAA	-13	NA	130284271	130274575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282851_130284050
Isoform_56880_9	chr5	-	1181	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	-25	392	-25	282	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCACTGCTGCGTCTGCC	NA	False	NA	-7	True	AATACA	-15	NA	130284396	130274963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
Isoform_56882_155	chr5	-	1503	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	42	3	4	-3	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284329	130274574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
Isoform_56884_14	chr5	-	1548	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTTGCATTTCTA	NA	False	NA	-2	True	AATAAA	-15	NA	130284373	130274573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
Isoform_56886_773	chr5	-	2286	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	16	19	16	-19	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAGGTCTTGTAAAAG	NA	False	NA	-15	True	AATAAA	-23	NA	134205597	134176911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
Isoform_56892_31	chr5	-	2129	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	1	-17	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	114.615083143322	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGGTCTTGTAAAAGTT	NA	False	NA	-13	True	AATAAA	-25	NA	134205612	134176909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_134177846_134182962_134183049_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
Isoform_56894_6	chr5	-	4353	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	29	-1	3	1	multi-exon	TRUE	canonical	3	228	junction_23	69.7198249746108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATTCTTTTCCTGCTG	664	False	NA	-5	True	AATAAA	-29	NA	134343571	134266689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_56895_3	chr5	-	4296	33	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	124.786677348786	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATTCTTTTCCTGCTG	656	False	NA	-5	True	AATAAA	-29	NA	134343579	134266689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272810_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278696_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_56896_4	chr5	-	4373	34	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_8	75.7046966966276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	655	False	NA	-6	True	AATAAA	-28	NA	134343580	134266690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
Isoform_56897_5	chr5	-	3533	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	59.5236274282929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485541	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56898_4	chr5	-	3524	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_30	59.8322562577151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485114	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_56899_9	chr5	-	3639	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-84	17	-56	1	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485626	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_5690_61	chr11	-	1819	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	16	2	-6	-2	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	258	False	NA	-9	True	AATAAA	-20	NA	61652872	61620481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
Isoform_56900_22	chr5	-	3580	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-25	17	3	1	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485567	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56901_6	chr5	-	3444	30	FSM	ENSMUSG00000023079.15	ENSMUST00000111244.5	3461	30	-5	22	-5	1	multi-exon	FALSE	canonical	3	55	junction_29	53.0244374146404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485115	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_56902_31	chr5	-	3495	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	7	22	7	1	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485563	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56903_19	chr5	-	3564	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-62	22	-62	1	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485632	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56904_4	chr5	-	3564	30	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	63.8779677833694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485136	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
Isoform_56905_5	chr5	-	3449	29	FSM	ENSMUSG00000023079.15	ENSMUST00000111245.9	3299	29	-131	-19	-4	1	multi-exon	FALSE	canonical	3	16	junction_11	59.2579431513667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATGAAAAAGAACAA	NA	False	NA	NA	False	TTTAAA	-7	NA	134485574	134386531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56906_3	chr5	-	3613	29	FSM	ENSMUSG00000023079.15	ENSMUST00000100650.10	3487	29	-124	-2	6	2	multi-exon	FALSE	canonical	3	127	junction_7	45.9988353889841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134485564	134387505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
Isoform_56908_1053	chr5	-	2409	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	162	155	-3	1	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2199	False	NA	-3	True	AATAAA	-19	NA	134668182	134648729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_56913_2023	chr5	-	2346	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	19	2	-3	-2	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTATGCTTGTCTTTCT	2199	False	NA	-6	True	AATAAA	-16	NA	134668182	134648732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_56915_57	chr5	-	2404	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	-36	-1	-36	1	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	9985	False	NA	-3	True	AATAAA	-19	NA	134668237	134648729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
Isoform_56923_131	chr5	-	3347	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-16	0	-16	0	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTGTGTGTCTGAG	5750	False	NA	0	True	AATAAA	-33	NA	134717468	134684892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
Isoform_56925_12	chr5	-	3407	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-90	14	-90	-13	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGGGGCTTGCATCCTCG	5676	False	NA	-14	True	AATAAA	-19	NA	134717542	134684906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
Isoform_56926_3	chr5	-	420	3	FSM	ENSMUSG00000085042.9	ENSMUST00000222613.2	363	3	-2	-55	-2	-9	multi-exon	FALSE	canonical	3	24	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTACTCCTGGACCC	NA	False	NA	-17	True	ATTAAA	-12	NA	135041644	135040984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135041187_135041283_135041405_135041547
Isoform_56927_3	chr5	-	501	2	ISM	ENSMUSG00000085042.9	ENSMUST00000154060.2	594	3	400	-11	34	3	3prime_fragment	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGCCCCTGAGTTTT	NA	False	NA	3	True	ATTAAA	-32	NA	135041608	135040964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_135041405_135041547
Isoform_56928_449	chr5	-	1283	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	580	1	4	-1	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTCCCTGGCCCTGC	NA	False	NA	-2	True	ATTAAA	-15	NA	135092940	135081811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
Isoform_56931_6	chr5	-	1393	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	300.041925445084	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAACTGGTGTCCCTGGCC	NA	False	NA	-6	True	ATTAAA	-11	NA	135092951	135081815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092634_135092776_135092867
Isoform_56933_171	chr5	-	1411	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	36	0	6	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378862	135320557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_56934_12	chr5	-	1449	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378900	135320557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_56935_12	chr5	-	1315	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	-15	-3	14	3	multi-exon	FALSE	canonical	3	68	junction_4	339.384075967639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTACAATTCATTGTGT	NA	False	NA	2	True	AATAAA	-23	NA	135378883	135320554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_56936_237	chr5	-	1270	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	14	3	14	-3	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAAGTCATTAGTGTG	NA	False	NA	-6	True	ATTAAA	-21	NA	135378883	135366222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_56938_11	chr5	-	1143	7	ISM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	-10	45667	-10	-5	5prime_fragment	FALSE	canonical	3	68	junction_3	365.317061681433	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACTGAAGTCATTAGTG	NA	False	NA	-8	True	ATTAAA	-19	NA	135378878	135366224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
Isoform_56939_6	chr5	-	5537	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	40	3	40	-3	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGAGTTTGCCCTTT	NA	False	NA	-8	True	AATAAA	-15	NA	135423360	135404997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
Isoform_5694_29	chr11	-	1749	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	14	8	-12	-4	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTCTGTATGTGGATA	230	False	NA	-11	True	AATAAA	-18	NA	61652900	61620483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
Isoform_56940_31	chr5	-	3864	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	29	-3622	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9639	False	NA	-1	True	TATAAA	-28	NA	135518083	135439010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56941_11	chr5	-	4872	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-2	-2645	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCCACTATCATTTT	9608	False	NA	-9	True	AATAAA	-14	NA	135518114	135438033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56942_7	chr5	-	5116	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-2399	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	9610	False	NA	-49	True	NA	NA	NA	135518112	135437787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56943_3	chr5	-	4070	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-177	-3622	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9433	False	NA	-1	True	TATAAA	-28	NA	135518289	135439010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56944_44	chr5	-	3902	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-3636	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTCTCCGTCTGCCTG	9611	False	NA	-15	True	TATAAA	-14	NA	135518111	135439024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56946_12	chr5	-	5142	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-2	-2399	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	9608	False	NA	-49	True	NA	NA	NA	135518114	135437787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56947_3	chr5	-	5323	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-183	-2399	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	9427	False	NA	-49	True	NA	NA	NA	135518295	135437787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56948_6	chr5	-	4077	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-177	-3639	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCTTCTCCGTCTGC	9433	False	NA	-18	True	TATAAA	-11	NA	135518289	135439027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56949_6	chr5	-	3888	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-3624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.8759677930023	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGCTTCTGCATCCT	9610	False	NA	-3	True	TATAAA	-26	NA	135518112	135439012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455283_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_5695_21	chr11	-	1792	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-62	4	-12	-4	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTCTGTATGTGGATA	230	False	NA	-11	True	AATAAA	-18	NA	61652900	61620483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
Isoform_56950_6	chr5	-	3898	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	16	-3622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.6567943205442	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9626	False	NA	-1	True	TATAAA	-28	NA	135518096	135439010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455283_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56953_4	chr5	-	5419	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	12	-2399	intron_retention	TRUE	canonical	2	76	junction_15	42.4266818562722	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	9622	False	NA	-49	True	NA	NA	NA	135518100	135437787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56954_16	chr5	-	4242	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-10	-3622	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9600	False	NA	-1	True	TATAAA	-28	NA	135518122	135439010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56956_7	chr5	-	5223	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-13	-2644	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCCACTATCATTTTT	9597	False	NA	-8	True	AATAAA	-15	NA	135518125	135438032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56958_4	chr5	-	5465	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-10	-2399	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	9600	False	NA	-49	True	NA	NA	NA	135518122	135437787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56963_4	chr5	-	1560	13	NIC	ENSMUSG00000039959.14	novel	3253	13	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	2	166	junction_11	29.2616311157727	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCTCAATTAGAATTTG	9619	False	NA	NA	False	AATAAA	-13	NA	135518103	135464970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
Isoform_56964_321	chr5	-	1362	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	195	2	-45	-2	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGATGGACTGTGGATG	5258	False	NA	-6	True	AATAAA	-19	NA	135773107	135764340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
Isoform_56966_3828	chr5	-	3520	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_1	0	3828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963453	135937262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135940506_135963176
Isoform_56968_107	chr5	-	3579	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-59	0	-42	0	multi-exon	FALSE	canonical	3	925	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963512	135937262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135940506_135963176
Isoform_5697_6	chr11	-	1673	10	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	77.5972508104078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTATGTGGATAGT	255	False	NA	-9	True	AATAAA	-20	NA	61652875	61620481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61652779
Isoform_56978_3	chr5	-	2797	11	FSM	ENSMUSG00000029699.14	ENSMUST00000111152.8	2745	11	-51	-1	-17	1	multi-exon	TRUE	canonical	1	1	junction_8	4.62709412050371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAACTGAGGTCATTG	NA	False	NA	-6	True	AATAAA	-17	NA	136003402	135989075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999281_136003115
Isoform_56979_3	chr5	-	2823	11	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	4.80520551069359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	-7	True	AATAAA	-16	NA	136003390	135989076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999320_136003115
Isoform_56981_963	chr5	-	2165	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	12	296	0	-1	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAGTGGGAAATGAGT	6696	False	NA	-12	True	ATTAAA	-18	NA	136164916	136151921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
Isoform_56986_4	chr5	-	3109	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	61	738	-18	-733	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGAGTCCACTCCTTC	NA	False	NA	NA	False	NA	NA	NA	136199506	136177050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136179807_136190340_136190579_136199391
Isoform_56987_3	chr5	-	3892	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	0	1	0	-1	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTTTTGGTTAGTGTT	NA	False	NA	-4	True	NA	NA	NA	136227817	136206981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_56988_255	chr5	-	907	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	28	2958	-25	-1	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTGTCCACACGTGC	NA	False	NA	-14	True	AGTAAA	-15	NA	136227789	136209938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_5699_38	chr11	-	3479	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	27	368	1	-3	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGTCAACTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	61821051	61762500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
Isoform_56990_6	chr5	-	1636	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	28	2229	-25	728	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTTTACGCCCA	NA	False	NA	NA	False	CATAAA	-14	NA	136227789	136209209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
Isoform_56993_10	chr5	-	2869	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	-21	0	-21	0	multi-exon	TRUE	canonical	1	1	junction_1	2.73861278752583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTGCTCTCCTGTGGTC	2481	False	NA	NA	False	ATTAAA	-20	NA	136273778	136247002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
Isoform_56994_3	chr5	-	1894	6	FSM	ENSMUSG00000005057.14	ENSMUST00000196447.2	1783	6	-109	-2	-43	2	multi-exon	FALSE	canonical	2	3	junction_1	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGAACTTTTGCTGG	2459	False	NA	NA	False	NA	NA	NA	136273800	136252620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
Isoform_56996_20	chr5	-	3042	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-211	0	15	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596329	136276988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_5700_11	chr11	-	3524	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	-21	371	-21	-6	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGGTGTCAACTTCC	NA	False	NA	NA	False	NA	NA	NA	61821099	61762503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
Isoform_57002_7	chr5	-	2872	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-54	3	-24	-3	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGGGTCTTTTATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	136596156	136276991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_57003_4	chr5	-	3099	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-279	1	-37	-1	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596381	136276989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_57005_10	chr5	-	2925	23	NIC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596134	136276988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
Isoform_57007_4	chr5	-	3058	2	FSM	ENSMUSG00000029705.18	ENSMUST00000177305.2	3290	2	232	0	5	0	multi-exon	FALSE	canonical	3	126	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	CATAAA	-36	NA	136596112	136511728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_136514706_136596031
Isoform_57008_3	chr5	-	3353	3	NNC	ENSMUSG00000029705.18	novel	3290	2	NA	NA	-85	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	CATAAA	-36	NA	136596429	136511728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_136512190_136512211_136514706_136596031
Isoform_57009_7	chr5	-	2076	8	ISM	ENSMUSG00000004415.16	ENSMUST00000057497.13	2724	13	128032	6	303	-6	3prime_fragment	FALSE	canonical	3	37	junction_4	3.15581743348207	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGTCTTTCTGTGGCT	NA	False	NA	-6	True	AATAAA	-13	NA	136783943	136770618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768
Isoform_5701_92	chr11	-	724	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	7	1	7	-1	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATCAAGTTATTGAAG	NA	False	NA	-16	True	AATAAA	-24	NA	62172194	62158050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
Isoform_57010_55	chr5	-	2363	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9698	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTTCTGTGGCTT	941	False	NA	-5	True	AATAAA	-14	NA	136811598	136770617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
Isoform_57011_8	chr5	-	2421	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9755	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTTCTGTGGCTTG	884	False	NA	-4	True	AATAAA	-15	NA	136811655	136770616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
Isoform_57013_35	chr5	-	680	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	50	10	-22	-6	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137015705	137011053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
Isoform_57014_12	chr5	-	975	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	197	36	197	-6	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016678	137011053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_57015_75	chr5	-	669	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	503	36	-10	-6	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016372	137011053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_57017_7	chr5	-	772	4	FSM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	22	-96	-13	-6	multi-exon	FALSE	canonical	0	0	junction_3	144.270579121316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCCTGCCTGCTCAT	NA	False	NA	-4	True	AATAAA	-12	NA	137016375	137011053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137016342
Isoform_57019_17	chr5	-	1323	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	30	0	30	0	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074959	137063846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
Isoform_5702_33	chr11	-	599	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATCAAGTTATTGAAG	NA	False	NA	-16	True	AATAAA	-24	NA	62172194	62158050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62158433_62159529_62159635_62172082
Isoform_57020_434	chr5	-	1257	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	96	0	3	0	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074893	137063846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
Isoform_57025_31	chr5	-	2964	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	13	-5	13	1	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTATGTCCCT	8278	False	NA	-7	True	AGTAAA	-23	NA	137305915	137293971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57027_15	chr5	-	2959	20	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	225.824080282544	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8276	False	NA	-12	True	AGTAAA	-18	NA	137305917	137293976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301301_137305307_137305448_137305685
Isoform_57032_112	chr5	-	2987	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	0	1	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGCTGTATGTCC	8265	False	NA	-9	True	AGTAAA	-21	NA	137305928	137293973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57033_19	chr5	-	3019	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	-36	5	-28	-1	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAACTGTGTGCTGTAT	8229	False	NA	-13	True	AGTAAA	-17	NA	137305964	137293977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57035_8	chr5	-	2879	20	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.527585506191	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8368	False	NA	-12	True	AGTAAA	-18	NA	137305825	137293976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301301_137305307_137305448_137305685
Isoform_57038_29	chr5	-	2980	20	NIC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_3	155.869662861488	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8278	False	NA	-12	True	AGTAAA	-18	NA	137305915	137293976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57047_146	chr5	-	3005	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	8	11	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8265	False	NA	-12	True	AGTAAA	-18	NA	137305928	137293976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57048_39	chr5	-	3043	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	-28	9	-28	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGTGTGCTGTATGTC	8229	False	NA	-10	True	AGTAAA	-20	NA	137305964	137293974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
Isoform_57058_34	chr5	-	1702	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	216	250	2	-250	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTCCAAGTCTGTT	1743	False	NA	-7	True	NA	NA	NA	137312450	137308165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
Isoform_57059_19	chr5	-	1742	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	176	250	-21	-250	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTCCAAGTCTGTT	1703	False	NA	-7	True	NA	NA	NA	137312490	137308165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
Isoform_57061_51	chr5	-	3299	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	31	0	31	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6532	False	NA	0	True	AATAAA	-15	NA	137331828	137312819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
Isoform_57063_189	chr5	-	788	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	100	-7	7	6	multi-exon	FALSE	canonical	3	320	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAATGGCCTCTTTTTCC	1739	False	NA	-26	True	AATAAA	-26	NA	137500680	137499693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137500342_137500540
Isoform_57064_17	chr5	-	875	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	6	0	6	0	multi-exon	FALSE	canonical	3	320	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1645	False	NA	-33	True	AATAAA	-19	NA	137500774	137499700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137500342_137500540
Isoform_57069_985	chr5	-	1654	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	204	2	-5	-1	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	985	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1736	False	NA	-7	True	CATAAA	-20	NA	137531568	137526390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
Isoform_5707_8	chr11	-	1858	15	NIC	ENSMUSG00000018501.18	novel	2815	20	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	122.161005335131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGATGATAAGGAAG	NA	False	NA	-27	True	GATAAA	-45	NA	62348148	62275570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_57070_10	chr5	-	1069	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2695	-2	-489	-1	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	6829	False	NA	-5	True	AATAAA	-18	NA	137606943	137603367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
Isoform_57074_174	chr5	-	1555	8	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	799	3	14	-1	3prime_fragment	FALSE	canonical	3	423	junction_6	64.4265124789793	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	4822	False	NA	-5	True	AATAAA	-18	NA	137608950	137603367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658
Isoform_57075_106	chr5	-	1535	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	88	3	9	-1	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	4111	False	NA	-5	True	AATAAA	-18	NA	137609661	137603367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
Isoform_57079_9	chr5	-	2900	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-40	-2	6	2	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1770	False	NA	NA	False	NA	NA	NA	137682982	137648744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_57080_12	chr5	-	2877	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	-6	22	-6	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	1758	False	NA	NA	False	NA	NA	NA	137682994	137648746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
Isoform_57083_11	chr5	-	3449	7	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-14	31	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	6.97017455544216	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	8609	False	NA	-1	True	ATTAAA	-16	NA	137739378	137729143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137739312
Isoform_57084_79	chr5	-	2793	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	332	3	332	-3	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	3058	False	NA	-9	True	AATAAA	-26	NA	137784593	137780170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
Isoform_57088_7	chr5	-	3154	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	-29	3	-1	-3	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	2697	False	NA	-9	True	AATAAA	-26	NA	137784954	137780170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
Isoform_57089_3	chr5	-	1016	4	FSM	ENSMUSG00000029726.17	ENSMUST00000132726.2	524	4	28	-520	4	-3	multi-exon	FALSE	canonical	3	16	junction_3	65.2703778311588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTGTCCAGCACTTT	2702	False	NA	-9	True	AATAAA	-26	NA	137784949	137780170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137784855
Isoform_57091_6	chr5	-	3092	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	-10	3388	-10	1577	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGGTACATTTCTCTG	1701	False	NA	NA	False	ACTAAA	-24	NA	138154016	138141351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
Isoform_57119_3228	chr5	-	2396	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	561	5	-43	-5	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	3228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTCTGTAGAGTTTTTA	2277	False	NA	-13	True	AATAAA	-27	NA	138170123	138162849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
Isoform_57132_41	chr5	-	2501	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	176.391146985028	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1963	False	NA	-4	True	AATAAA	-18	NA	138185477	138176878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
Isoform_57134_181	chr5	-	2380	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1962	False	NA	-4	True	AATAAA	-18	NA	138185478	138176878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
Isoform_57135_385	chr5	-	2304	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
Isoform_57136_17	chr5	-	2299	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	7	2	7	1	multi-exon	FALSE	canonical	3	12	junction_14	183.295568157341	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	9939	False	NA	-6	True	AATAAA	-16	NA	138185706	138176880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
Isoform_57137_79	chr5	-	2404	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1959	False	NA	-4	True	AATAAA	-18	NA	138185481	138176878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
Isoform_57138_9	chr5	-	2327	15	NNC	ENSMUSG00000036980.14	novel	2308	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_14	185.272551575637	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCCTCCCGCATCAC	9933	False	NA	-5	True	AATAAA	-17	NA	138185712	138176879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185631
Isoform_57139_24	chr5	-	2808	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	-716	1	-23	0	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9193	False	NA	-3	True	ATTAAA	-17	NA	138262318	138257920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
Isoform_57140_186	chr5	-	2530	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-43	3	-4	0	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9212	False	NA	-3	True	ATTAAA	-17	NA	138262299	138257920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_57141_5	chr5	-	2664	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-60	-114	-21	114	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCCAGTTGTCA	9195	False	NA	NA	False	NA	NA	NA	138262316	138257803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
Isoform_57142_5	chr5	-	2904	9	NIC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_3	5.91475908216049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGAGTTTGTCTGTGTGT	9216	False	NA	-3	True	ATTAAA	-17	NA	138262295	138257920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
Isoform_57143_15	chr5	-	2578	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	6	2	6	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1727	False	NA	-2	True	AATAAA	-18	NA	138278261	138271918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
Isoform_57144_5	chr5	-	2272	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	-10	-8	8	4	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTTGTTTATCAA	1742	False	NA	-1	True	AATAAA	-18	NA	138618012	138604373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
Isoform_57145_11	chr5	-	2263	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	24	2462	1	2	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCTTTGTTTGTTTATC	1755	False	NA	-3	True	AATAAA	-16	NA	138617999	138604375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
Isoform_57146_4	chr5	-	3656	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	27	-365	7	365	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAGTTGTATTCAG	1761	False	NA	NA	False	AATAAA	-14	NA	138617993	138602880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
Isoform_57148_216	chr5	-	1005	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	93	962	9	-5	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138980699	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_57149_4	chr5	-	1612	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	72	376	-12	126	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTATTTCTGATGCG	NA	False	NA	-15	True	AATAAA	-16	NA	138980720	138962144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_57150_66	chr5	-	1039	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	59	962	-25	-5	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138980733	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_57153_9	chr5	-	1449	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-351	962	-351	-5	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138981143	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
Isoform_57154_45	chr5	-	1270	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-17	34	-17	-5	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138981859	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
Isoform_57157_10	chr5	-	1138	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138981857	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
Isoform_57158_4	chr5	-	996	6	NIC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-338	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	159.261294732901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138982180	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981953
Isoform_57159_6	chr5	-	1171	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	157.310393807911	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-9	NA	138980698	138962730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980296
Isoform_5716_37	chr11	-	2308	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	0	863	0	-863	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62348149	62293071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_57161_6	chr5	-	2570	11	FSM	ENSMUSG00000025855.14	ENSMUST00000026973.14	2637	11	55	12	55	-1	multi-exon	FALSE	canonical	1	2	junction_7	3.06757233003559	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCCCAACCTGGGAG	NA	False	NA	-14	True	ATTAAA	-14	NA	139115459	139003072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139004587_139005810_139005893_139022788_139022911_139028189_139028251_139036412_139036572_139048308_139048356_139049010_139049073_139092375_139092468_139094238_139094410_139113341_139113541_139115398
Isoform_57162_17	chr5	-	2446	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	111	0	111	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	5069	False	NA	-5	True	AATAAA	-20	NA	139311266	139257630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
Isoform_57163_16	chr5	-	993	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	62	1406	-6	227	multi-exon	FALSE	canonical	3	183	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-12	True	TTTAAA	-14	NA	139330926	139323349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139324131_139328317_139328430_139330826
Isoform_57164_57	chr5	-	766	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	62	1633	-6	0	multi-exon	FALSE	canonical	3	183	junction_2	1.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTGGCTTTTGAC	NA	False	NA	-18	True	AATACA	-14	NA	139330926	139323576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139324131_139328317_139328430_139330826
Isoform_57166_95	chr5	-	1455	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-34	8	-9	-8	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTATTCCTGACTTTT	NA	False	NA	-14	True	NA	NA	NA	139446291	139345501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
Isoform_57168_7	chr5	-	2008	4	FSM	ENSMUSG00000053553.12	ENSMUST00000198474.2	2030	4	14	8	-2	-8	multi-exon	FALSE	canonical	3	675	junction_3	29.698484809835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTATTCCTGACTTTT	NA	False	NA	-14	True	NA	NA	NA	139446268	139345501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139347144_139349727_139349919_139441171_139441302_139446223
Isoform_57171_42	chr5	-	3097	7	FSM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	67	5	-18	0	multi-exon	FALSE	canonical	3	27	junction_6	14.7271480229163	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	8744	False	NA	-11	True	AATAAA	-19	NA	139470237	139456970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
Isoform_57172_28	chr5	-	3086	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	35	0	-18	0	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	8744	False	NA	-11	True	AATAAA	-19	NA	139470237	139456970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
Isoform_57174_5	chr5	-	1993	3	ISM	ENSMUSG00000053581.14	ENSMUST00000143889.2	433	4	-38	1288	-2	-1288	5prime_fragment	FALSE	canonical	3	27	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8760	False	NA	NA	False	NA	NA	NA	139470221	139466119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_139467816_139468456_139468553_139470020
Isoform_57175_4	chr5	-	1969	3	ISM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	64	9149	11	-1288	5prime_fragment	FALSE	canonical	3	34	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8773	False	NA	NA	False	NA	NA	NA	139470208	139466119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_139467816_139468456_139468553_139470031
Isoform_57176_3	chr5	-	2330	16	ISM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	17402	-3	-3258	0	3prime_fragment	TRUE	canonical	0	0	junction_11	69.113883474226	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139743991	139737036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849
Isoform_57177_3	chr5	-	2741	18	ISM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	16250	-2	3107	-1	3prime_fragment	FALSE	canonical	0	0	junction_11	65.3301437443765	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGGTGTCCTGTGTTG	NA	False	NA	-10	True	AATGAA	-18	NA	139745143	139737037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890
Isoform_57178_3	chr5	-	921	2	ISM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	254	2	254	-2	3prime_fragment	FALSE	canonical	3	220	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGCTGGCCTTCTCAG	7609	False	NA	-35	True	AATAAA	-8	NA	139812344	139809369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_139809829_139811882
Isoform_57179_208	chr5	-	830	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	27	26	-15	-5	multi-exon	FALSE	canonical	3	166	junction_2	27	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACTTGGCTGGCCTTCT	7340	False	NA	-38	True	AATAAA	-5	NA	139812613	139809372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139809829_139811882_139812120_139812476
Isoform_57180_80	chr5	-	770	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	-42	5	0	-5	multi-exon	FALSE	canonical	3	69	junction_2	75.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACTTGGCTGGCCTTCT	7313	False	NA	-38	True	AATAAA	-5	NA	139812640	139809372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139809829_139811882_139812120_139812563
Isoform_57182_255	chr5	-	2646	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-15	9	-15	-4	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140307322	139994452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_57183_55	chr5	-	2643	18	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_17	43.2672550934514	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGATTGTGTCCAAGGCT	NA	False	NA	-5	True	AATAAA	-21	NA	140307319	139994449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300905_140307261
Isoform_57184_14	chr5	-	2521	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	48.426329357076	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCCAAGGCTCCAAGC	NA	False	NA	1	True	AATAAA	-27	NA	140307329	139994443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_57185_7	chr5	-	2493	17	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	61.8553946212454	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTGTGTCCAAGGCTCC	NA	False	NA	-3	True	AATAAA	-23	NA	140307308	139994447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300905_140307261
Isoform_57186_4	chr5	-	2546	17	FSM	ENSMUSG00000029554.16	ENSMUST00000110829.7	2547	17	-2	3	0	2	multi-exon	FALSE	canonical	0	0	junction_3	52.7873090808766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTGTCCAAGGCTCCA	NA	False	NA	-2	True	AATAAA	-24	NA	140307307	139994446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_57187_5	chr5	-	3060	9	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-25	285108	-25	-126814	5prime_fragment	FALSE	canonical	3	167	junction_8	18.9864260723286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140307332	140279551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
Isoform_57189_138	chr5	-	1424	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	19	0	19	0	multi-exon	FALSE	canonical	3	45	junction_2	12	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	3920	False	NA	-5	True	AAAACA	-37	NA	140317634	140313428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140314536_140316734_140317025_140317607
Isoform_57190_338	chr5	-	2608	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	21	-2	0	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7741	False	NA	-10	True	AATAAA	-16	NA	140374996	140326055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
Isoform_57191_33	chr5	-	2657	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	-28	-2	-28	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7692	False	NA	-10	True	AATAAA	-16	NA	140375045	140326055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
Isoform_57194_10	chr5	-	4669	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-15	4	-15	-4	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTCTCTCTCTCTCTC	1261	False	NA	NA	False	AATAAA	-12	NA	140634801	140606336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
Isoform_57195_3	chr5	-	4321	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.69652169565652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTCTGCCTTTGGCAG	4530	False	NA	NA	False	AGTAAA	-15	NA	140688014	140649262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_140651249_140651762_140651964_140654776_140654861_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_57196_4	chr5	-	2630	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	-5	20	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATGTGTCGTGCCTT	4484	False	NA	NA	False	NA	NA	NA	140688060	140651014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_57197_7	chr5	-	4353	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTTTGGCAGGT	4515	False	NA	NA	False	AGTAAA	-17	NA	140688029	140649260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_57199_8	chr5	-	4265	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	90	1682	6	-4	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTCTGCCTTTGGCA	4501	False	NA	NA	False	AGTAAA	-14	NA	140688043	140649263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_572_22	SIRV8001	+	2439	1	FSM	SIRV8001A	SIRV8001	8001	1	0	5562	0	-5562	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAGGAGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	0	2439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8001_+_0_2400
Isoform_5720_55	chr11	-	855	5	ISM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	1	18226	1	121	5prime_fragment	FALSE	canonical	3	403	junction_2	26.6211851727154	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACAAGTAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	62348148	62310434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
Isoform_57200_6	chr5	-	4322	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	36	1679	-3	-1	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTTTGGCAGGT	4447	False	NA	NA	False	AGTAAA	-17	NA	140688097	140649260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_57201_3	chr5	-	4147	22	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.36660026534076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTCTGCCTTTGGCA	4484	False	NA	NA	False	AGTAAA	-14	NA	140688060	140649263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140679169_140679299_140682762_140682809_140685439_140685488_140687936
Isoform_57202_5	chr5	-	3147	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	262	7	-12	-7	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTCTGCTTCATGC	NA	False	NA	NA	False	AATAAA	-20	NA	140815924	140744169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
Isoform_57203_7	chr5	-	1299	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	9	-9	9	7	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCCACAGTCTCACTAG	NA	False	NA	NA	False	ATTAAA	-30	NA	140867951	140858737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
Isoform_57205_23	chr5	-	3677	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	23	0	2	0	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATGTAGGATCTGCA	NA	False	NA	-5	True	AATAAA	-21	NA	142536830	142470593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
Isoform_57207_138	chr5	-	2787	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	26	18	26	-18	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTTAACCCAT	NA	False	NA	-20	True	NA	NA	NA	142880967	142857561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
Isoform_5723_574	chr11	-	1014	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	20	-2	20	2	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	8391	False	NA	-12	True	AATAAA	-21	NA	62430067	62415769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
Isoform_5724_8	chr11	-	1064	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	-30	-2	-30	2	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACATATTTCTTT	8341	False	NA	-12	True	AATAAA	-21	NA	62430117	62415769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
Isoform_57240_3766	chr5	-	1887	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	29	4	0	-4	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	3766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTTGTGGCTCTGTGG	8918	False	NA	-5	True	AATAAA	-23	NA	142892480	142888873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
Isoform_57252_12	chr5	-	4456	17	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_16	44.6192223150516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6142	False	NA	-2	True	AATAAA	-15	NA	143098737	142976648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084256_143098653
Isoform_57255_24	chr5	-	4493	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-20	1	-20	-1	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6110	False	NA	-2	True	AATAAA	-15	NA	143098769	142976648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
Isoform_57258_3	chr5	-	4536	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-64	2	-64	-2	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6066	False	NA	-3	True	AATAAA	-14	NA	143098813	142976649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
Isoform_57259_7	chr5	-	4624	17	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_16	45.1403626896152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6144	False	NA	-3	True	AATAAA	-14	NA	143098735	142976649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084256_143098653
Isoform_57262_22	chr5	-	4665	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	-34	-927	-20	0	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6110	False	NA	-1	True	AATAAA	-16	NA	143098769	142976647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
Isoform_57269_9	chr5	-	511	3	FSM	ENSMUSG00000104529.5	ENSMUST00000198334.2	520	3	6	3	6	-3	multi-exon	FALSE	canonical	3	32	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3483	False	NA	-3	True	AATAAA	-16	NA	143151500	143150536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143150848_143151184_143151305_143151420
Isoform_57270_7	chr5	-	590	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3483	False	NA	-3	True	AATAAA	-16	NA	143151500	143150536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_143150848_143151105_143151305_143151420
Isoform_57271_42	chr5	-	3359	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	-28	4	17	-3	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGCTGTTTATGTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	143166513	143157944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
Isoform_57273_11	chr5	-	3362	5	NNC	ENSMUSG00000061898.11	novel	3480	5	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	14.3243673507768	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGCTGTTTATGTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	143166513	143157944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165301_143166303
Isoform_57274_409	chr5	-	2192	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	14	2	-6	0	multi-exon	FALSE	canonical	3	130	junction_3	6.98569967862919	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCATTGTGGGGTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	143301101	143286963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
Isoform_57278_36	chr5	-	2233	6	NNC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	52.428999608995	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGGCATTGTGGGGTT	NA	False	NA	-9	True	AATAAA	-15	NA	143301095	143286965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300608
Isoform_57279_9	chr5	-	1538	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	94.7198995723707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGGATATTTGTTTTCT	5307	False	NA	-21	True	AATACA	-18	NA	143314973	143302251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314920
Isoform_57280_5	chr5	-	1387	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.1580146425249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTTGTTTTCTCATCA	5310	False	NA	-16	True	AATACA	-23	NA	143314970	143302246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
Isoform_57281_41	chr5	-	1325	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	39	0	-3	0	multi-exon	FALSE	canonical	3	167	junction_7	40.248209492435	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5308	False	NA	-13	True	AATACA	-26	NA	143314972	143302243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
Isoform_57282_4	chr5	-	1409	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	2	1	combination_of_known_junctions	TRUE	canonical	1	5	junction_6	91.0541440180355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCTCATCATTGT	5307	False	NA	-12	True	AATACA	-27	NA	143314973	143302242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143312061_143314145_143314326_143314920
Isoform_57283_7	chr5	-	1416	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	86.0744812736656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5305	False	NA	-13	True	AATACA	-26	NA	143314975	143302243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314920
Isoform_57286_793	chr5	-	2271	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	41	1847	-2	1	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTTATGCTTGTGTT	3464	False	NA	-8	True	AATAAA	-14	NA	143513750	143491235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
Isoform_57287_46	chr5	-	2300	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	11	1848	11	0	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTTATGCTTGTGT	3434	False	NA	-9	True	AATAAA	-13	NA	143513780	143491236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
Isoform_5729_158	chr11	-	2034	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-51	1	-51	-1	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGACTGTGCTTTATTA	5419	False	NA	-3	True	AATACA	-16	NA	62539400	62495710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
Isoform_57296_8	chr5	-	5083	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	61	7	61	-7	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAACAACCGTCTCAGT	NA	False	NA	NA	False	TATAAA	-9	NA	143717974	143696086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
Isoform_57297_6	chr5	-	5147	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-3	7	-3	-7	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAACAACCGTCTCAGT	NA	False	NA	NA	False	TATAAA	-9	NA	143718038	143696086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
Isoform_5730_21	chr11	-	2058	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-75	1	-75	-1	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGACTGTGCTTTATTA	5395	False	NA	-3	True	AATACA	-16	NA	62539424	62495710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
Isoform_57302_312	chr5	-	1149	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	36	0	-15	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846621	143839521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
Isoform_57303_104	chr5	-	1033	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	38	2	-21	-2	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTATTTTATTTT	NA	False	NA	-20	True	AATAAA	-14	NA	143846627	143839523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
Isoform_57304_323	chr5	-	1787	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-24	6	0	-6	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGGTTTCCTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	143951695	143924732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
Isoform_57311_32	chr5	-	4168	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	30	908	21	1	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144160403	144132167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
Isoform_57313_3	chr5	-	2372	9	ISM	ENSMUSG00000066621.13	ENSMUST00000153103.8	4329	24	-30	14117	-19	7	5prime_fragment	FALSE	canonical	3	63	junction_2	8.07774721070176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCACCACCA	NA	False	NA	NA	False	NA	NA	NA	144160395	144146285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144154227_144155331_144155567_144160312
Isoform_57314_3	chr5	-	923	2	FSM	ENSMUSG00000066621.13	ENSMUST00000136018.2	493	2	-26	-404	22	404	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144160402	144154733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144155567_144160312
Isoform_57315_12	chr5	-	3224	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	20	3	20	-3	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGAGCTGTAAGTGGT	NA	False	NA	-4	True	AATAAA	-14	NA	144294902	144201338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
Isoform_57316_18	chr5	-	2308	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	-2	941	-2	-941	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCCAATTTTTACCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	144294924	144202276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
Isoform_57318_4	chr5	-	2411	6	ISM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	9097	0	9097	0	3prime_fragment	TRUE	canonical	2	9	junction_3	3.3466401061363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTGGCAAGAATATC	NA	False	NA	-15	True	AATAAA	-17	NA	144689362	144672724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097
Isoform_57319_3	chr5	-	2827	7	ISM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	5915	3	5915	-3	3prime_fragment	FALSE	canonical	2	6	junction_6	4.2687494916219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGTGGCAAGAAT	NA	False	NA	-18	True	AATAAA	-14	NA	144692544	144672727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020
Isoform_5732_3	chr11	-	2993	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	51	7	-2	-7	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATCGCAGGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	62680237	62669219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_57320_5	chr5	-	2765	8	FSM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	40	0	40	0	multi-exon	FALSE	canonical	2	3	junction_7	5.20204041600946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTGGCAAGAATATC	NA	False	NA	-15	True	AATAAA	-17	NA	144698419	144672724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020_144692327_144698266
Isoform_57321_34	chr5	-	2736	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-7	-4	-7	4	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCCTTGGCACGGTG	NA	False	NA	-35	True	AATAAA	-20	NA	144902664	144815916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57322_5	chr5	-	3132	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	9	-416	1	416	multi-exon	TRUE	canonical	3	98	junction_2	50.6104602342352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAAAAGTACAATTTG	NA	False	NA	NA	False	AAAAAG	-28	NA	144902648	144815504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57324_81	chr5	-	2734	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	7	2602	-1	7	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902650	144815913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57325_3	chr5	-	3164	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-7	2186	-7	423	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACAATTTGTTGTGTT	NA	False	NA	NA	False	AAAAAG	-35	NA	144902664	144815497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57326_6	chr5	-	5329	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	18	-4	10	-3	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTCCTTCCTCTCT	NA	False	NA	-10	True	AATAAA	-17	NA	144902639	144813307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57327_5	chr5	-	2586	17	NIC	ENSMUSG00000038780.15	novel	5420	19	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGGCACGGTGGGA	NA	False	NA	-32	True	AATAAA	-23	NA	144902649	144815913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_57328_4	chr5	-	2006	13	ISM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-7	5315	-7	166	5prime_fragment	FALSE	canonical	3	239	junction_1	24.1504255771106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGACTTGTGTTCTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	144902664	144821235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
Isoform_5733_3	chr11	-	2045	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	-11	1017	-11	201	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTGGTTTCGCTGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	62680299	62670229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_57330_255	chr5	-	1251	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	216	886	-24	429	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGTTTGGCAGTTTC	NA	False	NA	-23	True	ATTAAA	-14	NA	145076832	145066464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
Isoform_57332_64	chr5	-	1321	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	146	886	-94	429	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTGTTTGGCAGTTTC	NA	False	NA	-23	True	ATTAAA	-14	NA	145076902	145066464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
Isoform_57339_10	chr5	-	477	4	ISM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	112	4095	112	311	5prime_fragment	FALSE	canonical	3	415	junction_3	31.5946549628608	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTAACATCTGCTTGG	NA	False	NA	-5	True	NA	NA	NA	145076936	145069673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_145069791_145071874_145071983_145073711_145073804_145076776
Isoform_5734_5	chr11	-	1843	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	-9	1217	-9	1	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTGTGTCTGTGTGT	NA	False	NA	-4	True	AATAGA	-17	NA	62680297	62670429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_57343_10	chr5	-	3033	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	42	12	42	-12	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	145103876	145084335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
Isoform_57346_1244	chr5	-	426	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	521	8	-13	0	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	1244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8618	False	NA	-10	True	AATAAA	-17	NA	145128351	145120515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
Isoform_57348_26	chr5	-	1971	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	-18	14	-18	-14	multi-exon	FALSE	canonical	3	18	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTGATTGTTCAG	1573	False	NA	NA	False	NA	NA	NA	145138696	145131769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145133010_145135486_145135611_145138089
Isoform_57353_3	chr5	-	3317	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	-41	0	4	0	multi-exon	FALSE	canonical	1	2	junction_4	52.1488254901297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2794	False	NA	NA	False	ATTAAA	-24	NA	146157752	146146005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
Isoform_57355_9	chr5	-	3141	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	2	-755	2	-6	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAAAGACTGTGTGCA	2762	False	NA	NA	False	ATTAAA	-18	NA	146157784	146146011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
Isoform_57356_60	chr5	-	3324	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	118	10	-19	-6	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAAAGACTGTGTGCA	2299	False	NA	NA	False	ATTAAA	-18	NA	146158247	146146011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
Isoform_57359_45	chr5	-	4157	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	155	15	155	15	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGTTTTTAACTATA	1277	False	NA	NA	False	NA	NA	NA	146731661	146671633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
Isoform_5736_3	chr11	-	3030	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	14	7	14	-7	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATCGCAGGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	62680274	62669219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
Isoform_57360_3	chr5	-	3898	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	201	-14	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	96.469726667309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTTTTTAACTATAC	1323	False	NA	NA	False	NA	NA	NA	146731615	146671632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
Isoform_57362_4	chr5	-	1733	5	FSM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	-38	-438	0	-409	multi-exon	FALSE	canonical	3	9	junction_4	53.0023584380922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900521
Isoform_57363_15	chr5	-	1722	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	0	409	0	-409	multi-exon	FALSE	canonical	3	7	junction_4	53.5863788662753	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
Isoform_57364_21	chr5	-	1573	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-2	3356	0	-409	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
Isoform_57365_7	chr5	-	1980	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-2	2949	0	-2	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGTGCATTTGTGC	NA	False	NA	0	True	NA	NA	NA	146900597	146891331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
Isoform_57366_35	chr5	-	1562	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-438	0	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
Isoform_57367_5	chr5	-	1966	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-842	0	-5	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGAGGCTGTGCATTTG	NA	False	NA	-3	True	NA	NA	NA	146900597	146891334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
Isoform_57368_3	chr5	-	1515	4	NIC	ENSMUSG00000016510.12	novel	2131	5	NA	NA	0	-413	intron_retention	FALSE	canonical	1	3	junction_3	56.7156650905785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGTGTAGTGAATC	NA	False	NA	-22	True	AATAAA	-13	NA	146900597	146891742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_146892626_146893596_146893755_146895634_146896087_146900575
Isoform_5737_6	chr11	-	2877	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAATCGCAGGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	62680238	62669221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
Isoform_57370_26	chr5	-	4091	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	32	434	32	-434	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTACATTCTTCCAGA	4992	False	NA	2	True	NA	NA	NA	147013364	146953898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_57372_31	chr5	-	3922	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	10	625	10	-625	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGGTGAATATTTGG	4970	False	NA	-1	True	CATAAA	-16	NA	147013386	146954089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_57374_3	chr5	-	4536	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	12	9	12	-9	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGGAGCCCGCCTCAT	4972	False	NA	NA	False	NA	NA	NA	147013384	146953473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_57376_3	chr5	-	1993	5	ISM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	23	11864	23	-10255	5prime_fragment	FALSE	canonical	3	53	junction_1	9.51314879522022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTCTGTGTATAT	4983	False	NA	NA	False	AAAACA	-35	NA	147013373	146965328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
Isoform_57379_4	chr5	-	7079	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-46	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	124.85655674939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCACTGTGTGGTCTCA	5485	False	NA	-6	True	AATAAA	-17	NA	148336647	148264222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_148266658_148266687_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_5738_3	chr11	-	1688	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGGGGTGTGTCTGTG	NA	False	NA	-7	True	AATAGA	-14	NA	62680260	62670432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
Isoform_57381_6	chr5	-	7156	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	19	4	19	-4	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCACTGTGTGGTCTC	5437	False	NA	-7	True	AATAAA	-16	NA	148336695	148264223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_5739_4	chr11	-	4893	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	20	-2	20	2	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTATGTTCCTATTTT	NA	False	NA	0	True	AATAAA	-17	NA	63813096	63776615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_63780572_63812159
Isoform_57390_3	chr5	-	5770	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-46	-1314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.880491497194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAGCATTAAGGAATCT	5485	False	NA	-4	True	AATAAA	-20	NA	148336647	148265533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_148266682_148266710_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279546_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_57392_9	chr5	-	3043	12	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	21	5461	21	1649	5prime_fragment	FALSE	canonical	3	383	junction_1	35.5351066081543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAATCAG	5439	False	NA	NA	False	NA	NA	NA	148336693	148269680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
Isoform_57393_3	chr5	-	3769	3	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	96	21441	-17	3302	5prime_fragment	FALSE	canonical	3	442	junction_2	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAAAACAATTAAAA	5514	False	NA	NA	False	NA	NA	NA	148336618	148285660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_148289260_148301971_148302062_148336538
Isoform_57394_383	chr5	-	2641	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-135	31	-8	-31	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489607	148441475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
Isoform_574_3	SIRV8001	+	3249	1	FSM	SIRV8001A	SIRV8001	8001	1	4750	2	4750	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AC	NA	False	NA	NA	False	NA	NA	NA	4750	7999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8001_+_4800_8000
Isoform_57404_64	chr5	-	2554	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-27	-463	-27	-31	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489626	148441475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
Isoform_57406_64	chr5	-	2535	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-8	-463	-8	-31	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAATAAAAAAAAAAAC	NA	False	NA	-35	True	AATAGA	-12	NA	148489607	148441475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
Isoform_5741_66	chr11	-	2913	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	6	-2	-6	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACCTGAGCGTGTGTC	5003	False	NA	-10	True	AATAAA	-8	NA	63970296	63853458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
Isoform_57418_622	chr5	-	2308	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	3	527	3	-527	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAGTTAAATGACTTT	6767	False	NA	-9	True	AATAAA	-22	NA	148989847	148984038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
Isoform_57419_1419	chr5	-	1312	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	1526	0	0	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6764	False	NA	NA	False	AGTAAA	-18	NA	148989850	148985037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
Isoform_5742_4	chr11	-	3213	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	12	-310	12	310	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCCTCCCTCCCTGTC	5019	False	NA	NA	False	AATAAA	-14	NA	63970280	63853142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
Isoform_57426_9	chr5	-	3618	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	48	junction_17	419.554775776112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559801	149540309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
Isoform_57427_167	chr5	-	3500	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	2	300	2	1	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149559801	149540308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_57428_250	chr5	-	3405	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	97	300	-32	1	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149559706	149540308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_57432_10	chr5	-	3800	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	2	0	2	0	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTTCTTTTGTTGTC	NA	False	NA	11	True	TTTAAA	-13	NA	149559801	149540008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_57433_29	chr5	-	3709	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	97	-4	-32	4	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTTTTGTTGTCCTTC	NA	False	NA	15	True	TTTAAA	-17	NA	149559706	149540004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
Isoform_57439_17	chr5	-	3369	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559832	149540310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
Isoform_5744_7	chr11	-	4064	21	FSM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	10	0	10	0	multi-exon	FALSE	canonical	3	13	junction_17	3.6779749863206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCACATGGTCTTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	65053777	64892864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_5745_3	chr11	-	2133	16	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	4	19611	4	-19609	5prime_fragment	FALSE	canonical	3	13	junction_12	3.56775684273591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAATTTTTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	65053783	64912475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_57452_3	chr5	-	2962	7	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-14	764	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	94.7042179044254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAAGTGGTGATCTT	5458	False	NA	NA	False	AATAAA	-10	NA	150589056	150530707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_150531906_150566633_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_57454_95	chr5	-	1984	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	6974	-11	54	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTATAATCTTTTG	5461	False	NA	-11	True	AATAAA	-23	NA	150589053	150566410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
Isoform_57455_3	chr5	-	2107	2	ISM	ENSMUSG00000029655.18	ENSMUST00000144378.2	3842	3	-14	12288	-14	1919	5prime_fragment	FALSE	canonical	3	228	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5458	False	NA	NA	False	NA	NA	NA	150589056	150583962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_150585979_150588965
Isoform_57459_205	chr5	-	1222	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	34	61	0	2	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	151574673	151566281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
Isoform_5746_3	chr11	-	2286	16	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	2	19460	2	-19458	5prime_fragment	FALSE	canonical	3	13	junction_12	3.56775684273591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGTATTCTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	65053785	64912324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
Isoform_57460_5	chr5	-	1287	8	NIC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	280	junction_1	25.7206341369758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTATCATTTGTGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	151574668	151566289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_151566569_151567175_151567246_151568077_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
Isoform_57461_10	chr5	-	2137	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTCTACTTCCTA	NA	False	NA	-3	True	NA	NA	NA	121757006	121736452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_57462_3	chr5	-	2244	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-6	-1379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGACTCAGGCATCTAT	NA	False	NA	NA	False	GATAAA	-13	NA	121757007	121736346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
Isoform_57463_6	chr5	-	1110	4	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	9.93310961716756	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTGGGGTAGTATA	8597	False	NA	-8	True	NA	NA	NA	147949136	147941091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_147941718_147943327_147943469_147943860_147944081_147949013
Isoform_57464_18	chr5	-	1270	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8597	False	NA	-1	True	NA	NA	NA	147949136	147941084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
Isoform_57465_7	chr5	-	1343	6	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_5	7.83326241102646	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGTAGTATACTCTTT	8597	False	NA	-2	True	NA	NA	NA	147949136	147941085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147945259_147945334_147949013
Isoform_57466_6	chr5	-	420	3	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	209	junction_2	23	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGTGTGTTGATTAA	NA	False	NA	NA	False	NA	NA	NA	109992920	109984503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_109984676_109984863_109984991_109992799
Isoform_57467_16	chr5	-	1445	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1221	2	intron_retention	FALSE	canonical	3	94	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	701	False	NA	0	True	NA	NA	NA	31646513	31643974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_31645334_31646427
Isoform_57468_3	chr5	-	1316	8	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	4	10190	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	82.959050631216	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAAATTTTCTGCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	105007655	104950844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
Isoform_57469_3	chr5	-	1278	7	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-7	10186	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	86.7437157506077	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCATGGAAATTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	105007666	104950848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_105007532
Isoform_5747_9	chr11	-	3636	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-16	-108	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGTAATCTGATTTT	NA	False	NA	-15	True	AATAAA	-16	NA	65679139	65579176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
Isoform_57471_10	chr5	-	1339	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTTGTATTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	36853361	36828746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_36829428_36830091_36830587_36853198
Isoform_57472_14	chr5	-	307	2	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGGGGTTCTATCGTA	NA	False	NA	-3	True	NA	NA	NA	113734553	113734150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_113734289_113734384
Isoform_57473_7	chr5	-	824	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCATGTCTATGTGCAAT	NA	False	NA	-5	True	NA	NA	NA	113734528	113711251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_113711932_113734384
Isoform_57475_4	chr5	-	1294	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	1	-1314	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97914491994847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTATTAGTAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	34445780	34385245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_34385540_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
Isoform_57476_3	chr5	-	1994	6	NNC	ENSMUSG00000062110.15	novel	436	2	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.4316025913722	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAAGTCTACTGGTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	74692403	74555794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_74556105_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
Isoform_57477_3	chr5	-	1627	12	NNC	ENSMUSG00000028969.11	novel	327	3	NA	NA	-32	10643	at_least_one_novel_splicesite	TRUE	non_canonical	1	2	junction_1	53.6067714977616	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGTCTGGCTTTCCTG	NA	False	NA	NA	False	CATAAA	-19	NA	24628560	24612595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_24613354_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
Isoform_57479_3	chr5	+	1618	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-25	-1160	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTGTGCTGCCATTTCG	NA	False	NA	15	True	NA	NA	NA	3391459	3571065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_57480_3	chr5	+	3773	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-25	995	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	GATAAA	-34	NA	3391459	3573220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
Isoform_57482_26	chr5	+	354	4	ISM	ENSMUSG00000058503.12	ENSMUST00000198598.5	2750	5	-1	2510	-1	-2510	5prime_fragment	FALSE	canonical	3	196	junction_3	8.17856276425687	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGGTAACACCA	NA	False	NA	-5	True	AAAACA	-39	NA	3593834	3608536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472
Isoform_57483_3	chr5	+	876	5	FSM	ENSMUSG00000058503.12	ENSMUST00000198598.5	2750	5	-12	1886	-9	-1886	multi-exon	FALSE	canonical	3	156	junction_4	22.642603648874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTTGCTGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	3593823	3609160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660
Isoform_57484_6	chr5	+	462	6	ISM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-3	10580	-1	-1886	5prime_fragment	FALSE	canonical	3	156	junction_4	23.7991596490296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTTGCTGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	3593834	3609160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096
Isoform_57485_5	chr5	+	1989	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-3	-495	-1	-3	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTGTCTTTGTGT	NA	False	NA	16	True	AGTAAA	-12	NA	3593834	3620235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
Isoform_57486_3	chr5	+	2399	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	-16	-422	-5	-3	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTGTCTTTGTGT	NA	False	NA	16	True	AGTAAA	-12	NA	3593827	3620235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
Isoform_57488_8	chr5	+	4122	24	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	15	-132	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.7117222191902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGGACCTCATTTGT	NA	False	NA	11	True	ATTAAA	-19	NA	3646213	3687098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_5749_4	chr11	-	3694	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-2	-25	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	-26	True	ATTAAA	-17	NA	65679114	65579093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
Isoform_57491_4	chr5	+	3621	21	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	254	3175	-51	-1854	5prime_fragment	FALSE	canonical	3	55	junction_8	11.6275534829989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGCCAATTAGTCATT	NA	False	NA	3	True	AATAAA	-18	NA	3646319	3684057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715
Isoform_57492_10	chr5	+	4165	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	253	137	-52	134	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAATGGTGGACCTCATT	NA	False	NA	8	True	ATTAAA	-16	NA	3646318	3687095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_57494_5	chr5	+	4228	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	187	140	54	131	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTCAATGGTGGACCTC	NA	False	NA	5	True	ATTAAA	-13	NA	3646252	3687092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
Isoform_57496_43	chr5	+	2972	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTATTTAAACCATTT	7988	False	NA	9	True	AATAAA	-22	NA	3853186	3891358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_57498_7	chr5	+	3077	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-17	84	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGGGTTTCCTTGCAT	7968	False	NA	7	True	ATTAAA	-14	NA	3853166	3891443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_57499_30	chr5	+	2939	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-10	1	-10	-1	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTATTTAAACCATTT	7975	False	NA	9	True	AATAAA	-22	NA	3853173	3891358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_575_3	SIRV8001	+	2295	1	FSM	SIRV8001A	SIRV8001	8001	1	5704	2	5704	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AC	NA	False	NA	NA	False	NA	NA	NA	5704	7999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8001_+_5700_8000
Isoform_57500_3	chr5	+	3024	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-10	-84	-10	84	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGGGTTTCCTTGCAT	7975	False	NA	7	True	ATTAAA	-14	NA	3853173	3891443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
Isoform_57501_47	chr5	+	1024	7	ISM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	109	3188	13	91	5prime_fragment	FALSE	canonical	3	19	junction_3	6.50640709864771	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCTAGCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	3978286	4007801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623
Isoform_57502_4	chr5	+	1257	7	ISM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	-124	3188	0	91	5prime_fragment	FALSE	canonical	3	19	junction_3	6.50640709864771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCTAGCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	3978053	4007801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623
Isoform_57504_6	chr5	+	1119	8	FSM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	100	791	4	-791	multi-exon	FALSE	canonical	3	19	junction_3	6.1145527311522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGAAGAAAACTGT	NA	False	NA	NA	False	AATACA	-44	NA	3978277	4010198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111
Isoform_57505_30	chr5	+	1354	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	12	2	12	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTTATTTTGTATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	4242378	4247649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_4242419_4246335
Isoform_57506_75	chr5	+	820	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	35	1396	0	29	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGTCTGTTATACCA	NA	False	NA	18	True	AATAAA	-24	NA	8106561	8117755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_57507_15	chr5	+	2242	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	35	-26	0	26	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGTTTCACAAATATAT	NA	False	NA	10	True	AATAAA	-20	NA	8106561	8119177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_57508_35	chr5	+	925	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	35	1291	0	134	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATATTTTCTTGTGA	NA	False	NA	5	True	TATAAA	-22	NA	8106561	8117860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
Isoform_57510_12	chr5	+	2753	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	29	2	6	-2	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTATTTGTGATTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	8472878	8504795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
Isoform_57512_9	chr5	+	2452	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13331	63	-138	-63	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8783149	8798507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_57513_18	chr5	+	2402	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13381	63	-88	-63	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8783199	8798507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_57517_13	chr5	+	4344	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	0	1	0	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848147	8916315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_57518_14	chr5	+	1809	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50937	-4	-210	4	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTATGTATATGAATTT	5174	False	NA	14	True	ATTAAA	-21	NA	8899122	8916319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_57519_20	chr5	+	1774	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50968	0	-179	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5205	False	NA	10	True	ATTAAA	-17	NA	8899153	8916315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_5752_29	chr11	-	3583	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	4	108	4	-108	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGTAATCTGATTTT	NA	False	NA	-15	True	AATAAA	-16	NA	65679119	65579176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
Isoform_57524_4	chr5	+	1913	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50829	0	-318	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5066	False	NA	10	True	ATTAAA	-17	NA	8899014	8916315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_57525_164	chr5	+	1064	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTCCTCCTTT	NA	False	NA	10	True	AATAAA	-21	NA	9150722	9169045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
Isoform_57528_102	chr5	+	874	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	273	0	-43	0	multi-exon	FALSE	canonical	3	465	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	21087461	21091868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21087654_21091186
Isoform_57530_32	chr5	+	2947	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	5	75	5	-75	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTTTTATTAATATT	NA	False	NA	16	True	AATAAA	-16	NA	21629960	21687047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
Isoform_57531_6	chr5	+	3033	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	-6	0	-6	0	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTCACTGTCCCA	NA	False	NA	91	True	AATAAA	-13	NA	21629949	21687122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
Isoform_57534_154	chr5	+	1982	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	146	93	8	-7	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTACATAATTTCTTCC	NA	False	NA	12	True	AATAAA	-14	NA	21851022	21867599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_57535_83	chr5	+	2070	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	147	4	9	-4	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTCCAATTTGTT	NA	False	NA	2	True	AGTAAA	-22	NA	21851023	21867688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_57539_3	chr5	+	2260	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	-36	-3	30	3	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAATTTGTTTTATTTG	NA	False	NA	9	True	AGTAAA	-29	NA	21850840	21867695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_5754_14	chr11	-	3677	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-7	25	-7	-25	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	-26	True	ATTAAA	-17	NA	65679130	65579093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
Isoform_57540_4	chr5	+	1942	6	FSM	ENSMUSG00000038525.17	ENSMUST00000148873.8	1167	6	210	-985	6	-7	multi-exon	FALSE	canonical	1	1	junction_1	154.901775328755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTACATAATTTCTTCC	NA	False	NA	12	True	AATAAA	-14	NA	21851020	21867599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21851234_21853659_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
Isoform_57541_164	chr5	+	1577	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	33	5	33	1	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCGTTAGTCTGTTA	NA	False	NA	11	True	AATAAA	-13	NA	21942171	21962145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
Isoform_57543_821	chr5	+	1449	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1468	0	1468	0	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991748	22008785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
Isoform_57550_4	chr5	+	2138	14	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	23	17853	15	-18	5prime_fragment	FALSE	canonical	3	18	junction_10	3.24721091064699	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAAGGAAGATGGT	NA	False	NA	17	True	AATGAA	-31	NA	23639461	23691380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299
Isoform_57555_8	chr5	+	3312	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	-12	-2	-12	2	multi-exon	TRUE	canonical	2	56	junction_5	10.4591040315534	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTATTTCTTTGTGTGTG	NA	False	NA	6	True	NA	NA	NA	23992696	24025369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
Isoform_57557_4	chr5	+	1370	4	FSM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	3	2	-1	-2	multi-exon	FALSE	canonical	0	0	junction_3	11.0453610171873	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCGTCAGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	24055597	24060034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24055620_24057118_24057154_24057715_24057759_24058764
Isoform_57559_31	chr5	+	2875	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	4	-2	-4	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGACTGTCTGTTATC	5181	False	NA	NA	False	NA	NA	NA	24369995	24389007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
Isoform_57561_6	chr5	+	4017	26	FSM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	-31	146	-31	1	multi-exon	FALSE	canonical	1	2	junction_12	2.97079114042034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGTGAGTTACAATGA	NA	False	NA	NA	False	CATAAA	-25	NA	24569776	24589326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
Isoform_57562_10	chr5	+	2151	11	NIC	ENSMUSG00000028978.13	novel	4132	26	NA	NA	12874	1	intron_retention	FALSE	canonical	2	4	junction_2	2.64764045897475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGTGAGTTACAATGA	4942	False	NA	NA	False	CATAAA	-25	NA	24582681	24589326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
Isoform_57563_601	chr5	+	2677	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	259	3	6	-3	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCCGAGGCTGTAGCT	NA	False	NA	26	True	AATAAA	-16	NA	24599411	24614940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
Isoform_57567_12	chr5	+	2981	15	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	1	3	intron_retention	FALSE	canonical	3	156	junction_3	17.6207206412895	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAAATTTTCAAAGAG	NA	False	NA	11	True	AATAAA	-1	NA	24599394	24614925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
Isoform_57569_20	chr5	+	4143	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	32	4	-12	-1	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTAGGCTTGGTCTTGTGT	NA	False	NA	6	True	AGTAAA	-15	NA	24630261	24645944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
Isoform_5757_3	chr11	-	3380	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	17	-111	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTCTTGTAATCTGAT	NA	False	NA	-18	True	AATAAA	-13	NA	65679094	65579179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
Isoform_57571_64	chr5	+	3725	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	-9	-1	0	1	multi-exon	FALSE	canonical	3	23	junction_2	9.8770215933527	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTTAGGTCTAGGG	NA	False	NA	4	True	ATTAAA	-15	NA	24791738	24797483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
Isoform_57572_59	chr5	+	3093	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	175	1	12	-1	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890996	24915375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57573_90	chr5	+	1947	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	161	1161	-2	-1159	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCTTCTTTGCGTTCC	NA	False	NA	24	True	TATAAA	-20	NA	24890982	24914215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57575_22	chr5	+	2650	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	109	510	-54	-508	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAAGTTATTTT	NA	False	NA	10	True	ATTAAA	-19	NA	24890930	24914866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57577_11	chr5	+	3117	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	151	1	-12	-1	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890972	24915375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57578_27	chr5	+	1979	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	121	1169	-42	-1167	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTTGAATGCTTCTT	NA	False	NA	16	True	TATAAA	-12	NA	24890942	24914207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_5758_3	chr11	-	1386	5	FSM	ENSMUSG00000020910.17	ENSMUST00000146338.8	1531	5	-4	149	-4	-13	multi-exon	FALSE	canonical	2	5	junction_2	39.9710832978042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943424	66928879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_66929272_66931044_66931162_66932218_66932934_66942506_66942605_66943360
Isoform_57580_84	chr5	+	3092	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	-1	0	-1	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGTCTGACGCAGTG	NA	False	NA	10	True	AATAAA	-19	NA	24890984	24915375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57581_89	chr5	+	1933	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	453	1160	-2	-1160	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATGCTTCTTTGCGTTC	NA	False	NA	23	True	TATAAA	-19	NA	24890982	24914214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
Isoform_57588_156	chr5	+	2529	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	23	0	23	0	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25427902	25470916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
Isoform_57589_104	chr5	+	2553	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	-3	2	-3	-1	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGACTCTTCTATCT	NA	False	NA	11	True	AATAAA	-25	NA	25427876	25470914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
Isoform_5759_52	chr11	-	1278	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-8	13	7	-13	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943404	66928879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
Isoform_57590_71	chr5	+	2122	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-64	-346	-35	0	multi-exon	TRUE	canonical	3	90	junction_4	20.0016528242663	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964959	26055686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
Isoform_57594_7	chr5	+	2043	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	-15	3	-15	-3	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAACTGTTCCTTGTGGT	NA	False	NA	7	True	AATAAA	-15	NA	25964979	26055683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
Isoform_57596_1114	chr5	+	2690	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	1	6	1	-6	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTGTTGTATTCCT	NA	False	NA	8	True	ATTAAA	-7	NA	28276361	28283654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
Isoform_57599_15	chr5	+	2726	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	-35	6	-35	-6	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTGTTGTATTCCT	NA	False	NA	8	True	ATTAAA	-7	NA	28276325	28283654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
Isoform_576_6	SIRV8001	+	2182	1	FSM	SIRV8001A	SIRV8001	8001	1	5819	0	5819	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	5819	8001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8001_+_5800_8000
Isoform_57607_3	chr5	+	1097	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-34	2892	-9	-8	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTTTTTGGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	28522165	28557685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_57609_3	chr5	+	3986	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-35	4	-10	-4	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGATTTATTTTGTATG	NA	False	NA	NA	False	AATAAA	-12	NA	28522164	28560573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
Isoform_5761_9	chr11	-	1211	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-15	-13	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	43.2229362980145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943435	66928879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66943360
Isoform_57610_65	chr5	+	2802	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	50	6367	50	5121	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	3009	False	NA	5	True	TTTAAA	-7	NA	29639711	29656474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_57612_5	chr5	+	3421	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	50	5748	50	5740	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAACAGATAACA	3009	False	NA	NA	False	NA	NA	NA	29639711	29657093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
Isoform_57614_37	chr5	+	4314	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-19	753	-19	-753	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCGGGCTGCGTCTCT	NA	False	NA	22	True	ATTAAA	-14	NA	29774220	29880337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
Isoform_57615_17	chr5	+	5037	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-15	26	-15	-26	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGTTGGAGTTTTGC	NA	False	NA	12	True	ATTAAA	-12	NA	29774224	29881064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
Isoform_5762_14	chr11	-	2455	4	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-16	-13	intron_retention	FALSE	canonical	3	79	junction_3	12.2474487139159	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943436	66928879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_66929272_66931044_66932934_66942506_66942605_66943360
Isoform_57622_135	chr5	+	1549	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	45	11	-4	-11	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTGCAGCCTTCTT	4591	False	NA	31	True	AATAAA	-31	NA	29940982	29972090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
Isoform_57623_4	chr5	+	1415	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	308	4775	1	-4	5prime_fragment	FALSE	canonical	3	694	junction_8	427.836252992894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATGTGTATGGAGTA	4602	False	NA	NA	False	ATTAAA	-15	NA	29940993	29986701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
Isoform_57626_60	chr5	+	2602	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	297	19	-4	-19	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGTTTTATACATTTA	4591	False	NA	14	True	AATAAA	-25	NA	29940982	29991457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
Isoform_57630_4	chr5	+	2268	2	FSM	ENSMUSG00000104667.2	ENSMUST00000197982.2	2249	2	-12	-7	-12	7	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGCACCATGTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	30297925	30302691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30298047_30300544
Isoform_57631_3	chr5	+	2288	4	NNC	ENSMUSG00000104667.2	novel	2249	2	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAAGTGCTCTGGAGC	NA	False	NA	NA	False	AATAAA	-10	NA	30297938	30302680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_30298047_30299680_30299812_30300544_30302183_30302269
Isoform_57632_12	chr5	+	2589	3	ISM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	9526	0	9526	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGGTGTTGGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	30319684	30323376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_30319986_30320884_30321055_30321258
Isoform_57634_157	chr5	+	2025	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	0	8	0	3	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30360245	30389583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
Isoform_57637_51	chr5	+	2023	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	20	5	-11	2	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGTTCGTAGTCTCGT	NA	False	NA	1	True	AATAAA	-16	NA	30360289	30389582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
Isoform_5764_13	chr11	-	4002	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-13	473	-13	361	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTTCCTTTTCATG	NA	False	NA	NA	False	AATAAA	-13	NA	67812992	67745821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_57640_4	chr5	+	3323	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	27	3453	-27	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTTGTCACTGTTGAA	NA	False	NA	4	True	AGTAAA	-15	NA	30437605	30473972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
Isoform_57641_4	chr5	+	1595	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	35	5173	-19	7	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCATGGCGTTTTGACT	NA	False	NA	NA	False	ATTAAA	-25	NA	30437613	30472252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
Isoform_57642_6	chr5	+	1971	6	NIC	ENSMUSG00000029175.18	novel	3088	6	NA	NA	-5	376	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	45.2035396844097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGATGTTTTGACTTCC	6673	False	NA	13	True	NA	NA	NA	30805271	30815964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814189_30814720
Isoform_57643_106	chr5	+	3009	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	49	-4	-49	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTTTTGGAATTTATT	6708	False	NA	5	True	AATAAA	-16	NA	30805306	30817024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_57644_357	chr5	+	1952	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	1106	-4	379	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTTTTGACTTCCTTG	6708	False	NA	16	True	NA	NA	NA	30805306	30815967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_57645_9	chr5	+	3060	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	30	-2	-4	2	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTTTTTAAATGAAAG	6708	False	NA	56	True	AATAAA	-16	NA	30805306	30817075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
Isoform_57647_5	chr5	+	2200	5	NIC	ENSMUSG00000029175.18	novel	3088	6	NA	NA	-1	375	intron_retention	FALSE	canonical	3	97	junction_3	8.8423695919137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGATGTTTTGACTTC	6677	False	NA	12	True	NA	NA	NA	30805275	30815963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_30805443_30812091_30812165_30812838_30813445_30814090_30814202_30814720
Isoform_57648_20	chr5	+	1474	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	1	-444	1	-8	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAATTGAAGTAAAGT	9187	False	NA	NA	False	NA	NA	NA	30824241	30832166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_57649_190	chr5	+	1060	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	0	-29	0	-2	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGTGGCAGTCCCGCCA	9186	False	NA	38	True	AATAAA	-22	NA	30824240	30831751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_5765_7	chr11	-	4338	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-44	168	-44	-168	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCGGACTGAATTACTG	NA	False	NA	NA	False	AATAAA	-23	NA	67813023	67745516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_57651_552	chr5	+	920	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	120	426	0	-5	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	9186	False	NA	35	True	AATAAA	-19	NA	30824240	30831748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_57653_36	chr5	+	1341	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	120	5	0	-5	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTGAAGTAAAGTTAC	9186	False	NA	NA	False	NA	NA	NA	30824240	30832169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
Isoform_57655_7	chr5	+	1397	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-7	98	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCCCTTATTTTATA	NA	False	NA	4	True	AATAAA	-13	NA	30869230	30944376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
Isoform_57657_34	chr5	+	4473	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	310	408	-20	-402	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCTTTCTAGGTTTGT	NA	False	NA	8	True	AATAAA	-18	NA	30869217	30956311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
Isoform_57658_24	chr5	+	4876	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	306	9	-24	-3	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCGGCCTCTGTTGTGT	NA	False	NA	2	True	ATTAAA	-14	NA	30869213	30956710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
Isoform_5766_3	chr11	-	4444	16	NNC	ENSMUSG00000020905.12	novel	4462	15	NA	NA	-12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.76724135490641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCCTTTCCTTTCCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	67812991	67745350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_67745709_67745736_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_57660_4	chr5	+	1836	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	-21	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_2	4.56131072780134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGATTTCCTCAATTG	2298	False	NA	12	True	AATAAA	-12	NA	30972076	31023402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
Isoform_57661_6	chr5	+	1856	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	119	46	0	1	multi-exon	FALSE	canonical	2	2	junction_4	5.53774924194538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATTTCCTCAATTGAC	2325	False	NA	14	True	AATAAA	-14	NA	30972103	31023404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
Isoform_57662_548	chr5	+	2769	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1624	1717	1	0	multi-exon	FALSE	canonical	3	358	junction_2	22.5422346662881	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026979	31034807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_57663_211	chr5	+	2796	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1597	1717	-22	0	multi-exon	TRUE	canonical	3	358	junction_2	22.5422346662881	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026952	31034807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_57667_9	chr5	+	2634	16	FSM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	5	-419	1	0	multi-exon	FALSE	canonical	2	5	junction_3	100.591230013136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026979	31034807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_57668_12	chr5	+	2917	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	358	junction_2	22.4453905191145	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31026979	31034805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
Isoform_5767_3	chr11	-	4097	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-108	473	-108	361	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTTCCTTTTCATG	NA	False	NA	NA	False	AATAAA	-13	NA	67813087	67745821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
Isoform_57670_4	chr5	+	3692	16	NNC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	0	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	11.916375287813	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAATCCAGGTGTAGTT	NA	False	NA	1	True	AATAAA	-9	NA	31046299	31064001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060552_31062046_31062160_31062452_31062500_31062974_31063106_31063459
Isoform_57673_7	chr5	+	3680	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	167	5	167	-5	multi-exon	TRUE	canonical	2	6	junction_1	4.70345075232981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGCTATTCTGCTCT	NA	False	NA	17	True	AATAAA	-22	NA	31070912	31078616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
Isoform_57675_5	chr5	+	997	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	292	-202	24	0	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTCTGTCTGTCTG	1434	False	NA	9	True	AATAAA	-18	NA	31079225	31088592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
Isoform_57676_3	chr5	+	1081	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	206	-200	-37	1	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTGTCTGTCTGTC	1348	False	NA	7	True	AATAAA	-16	NA	31079139	31088590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
Isoform_57677_51	chr5	+	1364	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	-11	-1	-11	1	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGAGGTTCCCTTTCCT	NA	False	NA	20	True	ATTAAA	-22	NA	31107398	31112436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
Isoform_57678_5	chr5	+	838	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200942.2	840	7	6	-4	6	-1	multi-exon	FALSE	canonical	3	17	junction_2	101.141402666432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTACCTGTGCGT	938	False	NA	11	True	AATAAA	-24	NA	31206008	31211966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31206101_31206805_31206828_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_57679_200	chr5	+	935	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	30	1	6	-1	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTACCTGTGCGT	938	False	NA	11	True	AATAAA	-24	NA	31206008	31211966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_5768_13	chr11	-	5900	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-169	7	17	-7	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCCCAGCCTTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	68277821	68100196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
Isoform_57680_12	chr5	+	1278	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	-314	2	0	-2	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCGTACCTGTGCG	594	False	NA	10	True	AATAAA	-23	NA	31205664	31211965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
Isoform_57681_3	chr5	+	3163	18	FSM	ENSMUSG00000013629.17	ENSMUST00000201838.4	3153	18	-15	5	-15	-5	multi-exon	FALSE	canonical	3	481	junction_6	57.9819802576807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACCTCTCTCTGTGCCT	7069	False	NA	NA	False	AATAGA	-12	NA	31212139	31225102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743
Isoform_57684_29	chr5	+	7121	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	16	0	-15	0	multi-exon	TRUE	canonical	3	481	junction_6	136.90610173497	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
Isoform_5769_3	chr11	-	2154	2	FSM	ENSMUSG00000020902.13	ENSMUST00000135141.2	944	2	59	-1269	59	1269	multi-exon	FALSE	canonical	3	99	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTCTACCAGGT	NA	False	NA	NA	False	TTTAAA	-19	NA	68277779	68275200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_68277011_68277435
Isoform_57691_3	chr5	+	2791	20	NIC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	-297	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_10	257.67642747104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	8584	False	NA	17	True	AATAAA	-13	NA	31229355	31235822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
Isoform_57700_5	chr5	+	2031	5	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	22	-4	intron_retention	FALSE	canonical	3	16	junction_4	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTCCAGTGTGTGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	31265684	31269866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31265766_31266230_31267053_31267521_31267664_31268456_31268524_31268947
Isoform_57701_7	chr5	+	1531	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-100	3	-100	-3	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTCGGCTCCTTTTGC	NA	False	NA	3	True	AATAAA	-16	NA	31273955	31294969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
Isoform_57703_11	chr5	+	2016	16	FSM	ENSMUSG00000029146.15	ENSMUST00000200730.4	2019	16	9	-6	-3	0	multi-exon	TRUE	canonical	2	10	junction_3	132.900564332888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350646	31356244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
Isoform_57706_705	chr5	+	1942	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	76	0	-3	0	multi-exon	FALSE	canonical	3	351	junction_8	24.4791664857432	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350646	31356244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
Isoform_57709_5	chr5	+	2101	19	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	109.789191939219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTTGTGTTGTGC	NA	False	NA	26	True	AATAAA	-14	NA	31398217	31408903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
Isoform_57710_217	chr5	+	2158	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	40	5	1	1	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTTGTGTTGTGCTT	NA	False	NA	28	True	AATAAA	-16	NA	31398247	31408905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
Isoform_57711_21	chr5	+	924	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201937.4	889	7	-32	-3	2	1	multi-exon	FALSE	canonical	3	67	junction_1	11.9361728465293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	7	True	AATAAA	-19	NA	31409036	31410544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
Isoform_57713_9	chr5	+	952	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	-45	-3	-30	1	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	7	True	AATAAA	-19	NA	31409004	31410544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
Isoform_57714_5	chr5	+	1005	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	25	-3	0	1	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	7	True	AATAAA	-19	NA	31409059	31410544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
Isoform_57715_3	chr5	+	1088	5	NIC	ENSMUSG00000029149.15	novel	904	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	42	junction_4	24.701973605362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTGATTACAGTTA	NA	False	NA	5	True	AATAAA	-17	NA	31409053	31410542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410441
Isoform_57717_106	chr5	+	3296	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	1	2	1	-2	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7147	False	NA	14	True	AATAAA	-15	NA	31609779	31639096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_57718_41	chr5	+	3237	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7147	False	NA	14	True	AATAAA	-15	NA	31609779	31639096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_57719_9	chr5	+	3229	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	92.8146300728261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTCTCTGGTCCTCCTT	7147	False	NA	12	True	AATAAA	-13	NA	31609779	31639094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_5772_162	chr11	-	2359	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	7	16	7	-16	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAAGGGT	NA	False	NA	NA	False	AATAAA	-8	NA	68743954	68712275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
Isoform_57720_13	chr5	+	3836	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7184	False	NA	14	True	AATAAA	-15	NA	31609816	31639096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
Isoform_57723_10	chr5	+	3145	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	0	-1	0	1	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGCTAAGATTCATTC	NA	False	NA	NA	False	NA	NA	NA	31652084	31670249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_57726_522	chr5	+	1635	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	21	1488	-5	557	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGTAAGCTTTCCT	NA	False	NA	25	True	GATAAA	-14	NA	31652105	31668760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_57729_21	chr5	+	2115	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	553	intron_retention	FALSE	canonical	3	859	junction_7	68.3745302644844	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTTGTGGTAAGCTT	NA	False	NA	21	True	GATAAA	-10	NA	31652096	31668756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_57731_9	chr5	+	2123	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	557	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	269.32883928135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGTAAGCTTTCCT	NA	False	NA	25	True	GATAAA	-14	NA	31652084	31668760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31652695_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
Isoform_57734_4	chr5	+	2126	8	FSM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-17	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.004637241469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTGTTTTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	31684338	31694166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
Isoform_57737_16	chr5	+	2502	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-4	1	-4	-1	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGTGATGATCATTCC	NA	False	NA	10	True	AGTAAA	-20	NA	31684351	31711385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
Isoform_57738_10	chr5	+	2499	14	NIC	ENSMUSG00000029141.17	novel	2499	14	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	26.2556840845094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAACTGAGGTGATGAT	NA	False	NA	4	True	AGTAAA	-14	NA	31684345	31711379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
Isoform_57739_27	chr5	+	2412	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	13	-1	-4	0	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGAGGTGATGATCAT	NA	False	NA	7	True	AGTAAA	-17	NA	31684351	31711382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
Isoform_5774_12	chr11	-	978	4	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	3	-2	intron_retention	FALSE	canonical	3	482	junction_2	50.8876758710354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAATTTCTGTGCCTTCA	7239	False	NA	-8	True	AATAAA	-16	NA	68864666	68863315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_68863568_68863768_68863855_68863942_68864384_68864467
Isoform_57740_6	chr5	+	2399	13	NIC	ENSMUSG00000029141.17	novel	2424	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	26.846270173382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAACTGAGGTGATGAT	NA	False	NA	4	True	AGTAAA	-14	NA	31684358	31711379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705957_31706026_31708056_31708127_31711082
Isoform_57741_295	chr5	+	418	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	60	0	14	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771342	31779988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
Isoform_57742_75	chr5	+	459	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	17	2	0	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771299	31779986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
Isoform_57743_26	chr5	+	399	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771342	31779988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31771367_31773724_31773832_31779720
Isoform_57746_12	chr5	+	2753	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	-14	2	14	-2	multi-exon	FALSE	canonical	3	2333	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTCTTAGAG	NA	False	NA	15	True	AATAAA	-18	NA	31771342	31779984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31773832_31779720
Isoform_5775_473	chr11	-	816	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	3	1	3	-1	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGCCTTCAAATCT	7239	False	NA	-3	True	AATAAA	-21	NA	68864666	68863310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
Isoform_57751_164	chr5	+	1577	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	295	16	9	-16	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCCTTCTTTCAAGTCT	5847	False	NA	19	True	AATAAA	-15	NA	31855322	32242290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
Isoform_57752_294	chr5	+	1552	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	320	16	-2	-16	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCCTTCTTTCAAGTCT	5872	False	NA	19	True	AATAAA	-15	NA	31855347	32242290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
Isoform_57754_6	chr5	+	1477	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	219.40148130767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTCTTTCAAGTCTTT	5874	False	NA	21	True	AATAAA	-17	NA	31855349	32242292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
Isoform_57757_48	chr5	+	2972	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	222	2768	-87	-1	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAGTGATTATTCTG	2917	False	NA	22	True	AGTAAA	-19	NA	32616408	32650099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
Isoform_57766_9	chr5	+	4131	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	6	-1480	6	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768520	32844401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
Isoform_57768_6	chr5	+	5336	43	FSM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	36	2557	0	13	multi-exon	TRUE	canonical	3	86	junction_1	24.5195673630974	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2062	False	NA	20	True	AATAAA	-21	NA	33021113	33149018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
Isoform_57769_156	chr5	+	1808	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	-46	2	-46	-2	multi-exon	FALSE	canonical	3	1727	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGCCTGGCCTTGAT	NA	False	NA	7	True	AATAAA	-45	NA	33176113	33185308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33176499_33183885
Isoform_57770_361	chr5	+	1702	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	62	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	9	True	AATAAA	-20	NA	33176221	33185310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33176499_33183885
Isoform_57776_1017	chr5	+	2146	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	45	2	-7	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492897	33530638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
Isoform_57777_39	chr5	+	2171	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	20	2	20	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492872	33530638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
Isoform_57783_26	chr5	+	2207	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	457	5	-1	-2	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815928	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_57784_31	chr5	+	2384	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-3	2	-3	-2	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815926	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
Isoform_57785_627	chr5	+	2186	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-1	2	-1	-2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815928	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_57786_21	chr5	+	2668	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-483	2	-25	-2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815446	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_57787_24	chr5	+	2307	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-122	2	-90	-2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815807	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_57790_17	chr5	+	2128	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	250.045261208968	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815925	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069_33829130_33829325
Isoform_57792_22	chr5	+	2065	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	239.805927059907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAACCCAGGTCCTGTT	NA	False	NA	30	True	ACTAAA	-18	NA	33815928	33829540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
Isoform_57794_8	chr5	+	492	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	19	0	19	0	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	5	True	AATAAA	-13	NA	34140832	34142353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
Isoform_57795_199	chr5	+	2864	8	FSM	ENSMUSG00000029110.14	ENSMUST00000030992.13	2895	8	30	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_4	1003.41470052242	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTTCATTTATTCAG	NA	False	NA	24	True	AATAAA	-14	NA	34493753	34510779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
Isoform_57800_1510	chr5	+	2920	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	122	4	-6	-1	multi-exon	FALSE	canonical	0	0	junction_4	927.964241042219	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTTCATTTATTCAG	NA	False	NA	24	True	AATAAA	-14	NA	34493754	34510779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
Isoform_57817_5	chr5	+	2470	9	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	17095	19347	-290	7307	internal_fragment	FALSE	canonical	3	56	junction_7	12.4140797081379	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAATAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	34600775	34623744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
Isoform_5782_7	chr11	-	6350	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	18	5	9	-2	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCTGTTTTCCGAT	NA	False	NA	-16	True	NA	NA	NA	68899268	68876527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
Isoform_57821_20	chr5	+	3950	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	159.558752676108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731101	34789639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
Isoform_57824_15	chr5	+	3882	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	118	7	13	-4	multi-exon	FALSE	canonical	3	43	junction_14	162.471932618803	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAGGTTGGGGGCAAC	NA	False	NA	19	True	AATAAA	-20	NA	34731125	34789645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
Isoform_57828_244	chr5	+	3865	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-116	12	-8	2	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731100	34789640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_57829_39	chr5	+	3906	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-153	8	-45	-5	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAGGTTGGGGGCAA	NA	False	NA	18	True	AATAAA	-19	NA	34731063	34789644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_57832_7	chr5	+	3932	15	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	135.779157427923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731125	34789639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
Isoform_57835_6	chr5	+	613	4	ISM	ENSMUSG00000029104.16	ENSMUST00000148953.8	4382	18	12	27924	8	-4247	5prime_fragment	FALSE	canonical	3	38	junction_2	7.76029781788188	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAAAGGTGGGTGTTT	1564	False	NA	NA	False	NA	NA	NA	34919095	34951498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448
Isoform_57836_5	chr5	+	3691	16	ISM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	1	3029	1	476	5prime_fragment	TRUE	canonical	2	8	junction_15	4.54899256246186	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGCAAAGATTGGGAAAAA	8632	False	NA	NA	False	AAAAAG	-38	NA	35106789	35187910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811
Isoform_57837_4	chr5	+	2806	7	FSM	ENSMUSG00000044716.13	ENSMUST00000114270.8	2779	7	-28	1	-28	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.10554159678513	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGCCTTGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	35214177	35238307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_35214333_35214435_35214482_35221677_35221909_35223793_35223995_35232646_35232767_35234491_35234612_35236374
Isoform_57838_17	chr5	+	3933	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.8490764427681	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTTCTCCCCTGT	NA	False	NA	23	True	AATAAA	-14	NA	35740421	35771144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_57839_24	chr5	+	3936	19	FSM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	39	1	0	-1	multi-exon	FALSE	canonical	3	46	junction_8	8.72982683351794	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTTCTCCCCTGT	NA	False	NA	23	True	AATAAA	-14	NA	35740422	35771144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_57840_3	chr5	+	4102	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	38	-1184	-3	-10	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGAAGCCCTGCTTT	NA	False	NA	14	True	AATAAA	-5	NA	35740432	35771135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
Isoform_57841_3	chr5	+	2676	18	NIC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-18	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	31.4529362259207	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCAGAGTTTAGTT	1539	False	NA	27	True	ATTAAA	-29	NA	35915249	36041481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36006859_36006914_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_57843_9	chr5	+	2735	19	NIC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-22	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.4896725838165	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1535	False	NA	19	True	ATTAAA	-21	NA	35915245	36041473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_57844_5	chr5	+	2618	17	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.2413676282316	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1535	False	NA	19	True	ATTAAA	-21	NA	35915245	36041473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_57845_6	chr5	+	1844	14	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-22	8	combination_of_known_junctions	FALSE	canonical	3	41	junction_11	15.4395174220198	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCCTAAGAATGTGAA	1535	False	NA	13	True	AAAACA	-16	NA	35915245	36015538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169
Isoform_57846_15	chr5	+	2636	18	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-22	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	26.7032908822983	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1535	False	NA	19	True	ATTAAA	-21	NA	35915245	36041473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_57847_9	chr5	+	2550	16	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-2	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	24.7246166131381	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATATGCAGAGTTTAGT	1511	False	NA	26	True	ATTAAA	-28	NA	35915221	36041480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_57848_8	chr5	+	2561	17	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	0	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	28.6552787458088	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATATATGCAGAGTTTA	1513	False	NA	24	True	ATTAAA	-26	NA	35915223	36041478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
Isoform_57849_12	chr5	+	2430	15	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	9	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.0672820043321	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACATATATGCAGA	1522	False	NA	19	True	ATTAAA	-21	NA	35915232	36041473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_5785_5	chr11	-	2442	8	NIC	ENSMUSG00000020899.17	novel	2129	11	NA	NA	1	-1858	intron_retention	FALSE	canonical	3	373	junction_7	45.7593527854901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATTTTAGAAAATGATA	NA	False	NA	NA	False	NA	NA	NA	68899285	68889638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_68890964_68891070_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
Isoform_57850_4	chr5	+	2754	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.0672820043321	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1535	False	NA	NA	False	AATAAA	-16	NA	35915245	36041810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
Isoform_57851_8	chr5	+	1048	8	ISM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	73	41647	73	-27392	5prime_fragment	FALSE	canonical	3	11	junction_3	3.80654645556407	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAAGGTGAGACTCT	2078	False	NA	NA	False	NA	NA	NA	36050735	36119620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548
Isoform_57854_1027	chr5	+	975	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	170	2383	170	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	15	True	AATAAA	-16	NA	36622511	36629041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
Isoform_57860_59	chr5	+	4068	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	17	3	17	-3	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025873	37112419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
Isoform_57863_5	chr5	+	1417	3	FSM	ENSMUSG00000063646.19	ENSMUST00000173836.8	849	3	-5	-563	-5	-19	multi-exon	FALSE	canonical	3	99	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	37185673	37249354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_37185944_37242579_37242843_37248470
Isoform_57866_127	chr5	+	2538	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCCTTTTTTATTT	NA	False	NA	14	True	AATAAA	-17	NA	37185666	37282640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_57869_6	chr5	+	487	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	77	-45912	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGCTGAGTGCAGTC	NA	False	NA	10	True	ATTAAA	-24	NA	37185755	37196742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_37185944_37196443
Isoform_57870_4	chr5	+	563	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	1	-45912	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGCTGAGTGCAGTC	NA	False	NA	10	True	ATTAAA	-24	NA	37185679	37196742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_37185944_37196443
Isoform_57871_4	chr5	+	2371	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	48.6269101310055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37204778	37282639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_37204890_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_57873_5	chr5	+	1395	6	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5741	40477	31	2649	internal_fragment	FALSE	canonical	3	147	junction_1	12.1556571192182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	2511	False	NA	NA	False	AATGAA	-35	NA	37248454	37264868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602
Isoform_57874_51	chr5	+	2045	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	22705	0	-3	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCCTTTTTTATTT	2480	False	NA	14	True	AATAAA	-17	NA	37248423	37282640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_57876_7	chr5	+	2918	12	FSM	ENSMUSG00000050248.12	ENSMUST00000101258.5	2796	12	-121	-1	-12	1	multi-exon	FALSE	canonical	3	19	junction_8	6.81029847284656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGCCTGCAATCCTA	8830	False	NA	NA	False	NA	NA	NA	37495830	37545109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028
Isoform_57877_12	chr5	+	4112	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	-23	2	-23	-2	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGAGTGGACCTC	8819	False	NA	1	True	CATAAA	-17	NA	37495819	37582397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
Isoform_57879_73	chr5	+	1535	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	521	946	12	2	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	15	True	AATAAA	-15	NA	38196606	38294163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
Isoform_5788_50	chr11	-	3893	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-40	8	-40	-8	multi-exon	TRUE	canonical	3	88	junction_15	16.162847964421	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTTTAATGTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	69214641	69190320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
Isoform_57880_9	chr5	+	1475	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	-2	-2	-2	2	multi-exon	FALSE	canonical	1	3	junction_10	31.04834939252	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGCAGTCAGTGAGTC	NA	False	NA	15	True	AATAAA	-15	NA	38196574	38294163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
Isoform_57883_25	chr5	+	1593	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCTATGATAACAAATTC	NA	False	NA	20	True	AATAAA	-21	NA	38377874	38391647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_57887_19	chr5	+	1651	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	False	NA	13	True	AATAAA	-14	NA	38377813	38391640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_5789_16	chr11	-	3975	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-124	10	-124	-10	multi-exon	FALSE	canonical	3	88	junction_15	16.162847964421	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214725	69190322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
Isoform_57894_173	chr5	+	1498	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	57	8	0	2	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATCTATGATAACA	NA	False	NA	15	True	AATAAA	-16	NA	38377870	38391642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
Isoform_57898_12	chr5	+	741	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	-10	-5	3	5	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATACTATTTAGAGAA	NA	False	NA	16	True	NA	NA	NA	38417717	38425256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
Isoform_57899_3	chr5	+	928	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	-193	-9	6	9	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTATTTAGAGAATTTA	NA	False	NA	20	True	NA	NA	NA	38417534	38425260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
Isoform_57900_58	chr5	+	1084	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	199	8	0	-8	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCATTTGGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	38417727	38426970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
Isoform_57902_4	chr5	+	1306	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	-5	-10	-5	10	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAATTTGGGGCTTGTTTC	NA	False	NA	NA	False	AATAAA	-35	NA	38417523	38426988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
Isoform_57903_4	chr5	+	3379	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	-257	19	-257	-19	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAAAGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	38434490	38461532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
Isoform_57904_3	chr5	+	1262	9	FSM	ENSMUSG00000029082.18	ENSMUST00000101237.8	2856	9	15	1579	15	-3	multi-exon	FALSE	canonical	3	10	junction_6	2.97647022494766	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCATCTGTATTTTTTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	43976247	43999749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_43976436_43977819_43977947_43978951_43979088_43979608_43979692_43982669_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
Isoform_57905_20	chr5	+	2787	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	287	196	-20	-196	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAGTATTTGCTTGGTT	NA	False	NA	11	True	AATAAA	-16	NA	44026181	44069521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
Isoform_57906_4	chr5	+	2876	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	196	198	-111	-198	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAAAGTATTTGCTTGG	NA	False	NA	9	True	AATAAA	-14	NA	44026090	44069519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
Isoform_5791_7	chr11	-	1488	2	ISM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-52	22097	-52	-6392	5prime_fragment	FALSE	canonical	3	93	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69214653	69212409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69212760_69213515
Isoform_57912_390	chr5	+	2193	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	57	17	57	-17	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45650772	45670016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_57913_1263	chr5	+	1675	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	57	535	57	-535	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTTGTTCTTTTT	NA	False	NA	14	True	AATGAA	-21	NA	45650772	45669498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_57916_156	chr5	+	2217	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	33	17	33	-17	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTTCACTGTGATT	NA	False	NA	18	True	AATAAA	-17	NA	45650748	45670016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_5792_5	chr11	-	485	3	ISM	ENSMUSG00000018474.19	ENSMUST00000092971.13	6066	39	-4	19681	-4	-3308	5prime_fragment	FALSE	canonical	2	7	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAGAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	69260221	69254857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69254970_69255517_69255631_69259961
Isoform_57924_34	chr5	+	1769	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	-37	535	-37	-535	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTTGTTCTTTTT	NA	False	NA	14	True	AATGAA	-21	NA	45650678	45669498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
Isoform_5793_10	chr11	-	431	3	NNC	ENSMUSG00000018474.19	novel	6066	39	NA	NA	-4303	-3307	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	69264535	69254856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_69254970_69255517_69255631_69264330
Isoform_57936_23	chr5	+	2179	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	88	2293	14	1346	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTTGTCAATAATGAG	7420	False	NA	NA	False	AATAAA	-15	NA	45677658	45684325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
Isoform_57937_1002	chr5	+	797	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	88	3675	14	3	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTGTATTC	7420	False	NA	25	True	AGTAAA	-14	NA	45677658	45682943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
Isoform_5794_5	chr11	-	3791	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-370	-2668	-72	981	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCATCTGCAATAACTA	NA	False	NA	-15	True	NA	NA	NA	69286529	69281769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_57947_191	chr5	+	3279	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2	422	2	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827262	45857466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_57948_7	chr5	+	4315	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-19	-593	-19	593	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATAACCTTTGGTGT	NA	False	NA	-4	True	AATACA	-19	NA	45827241	45858481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
Isoform_57952_5	chr5	+	3266	6	FSM	ENSMUSG00000031558.16	ENSMUST00000172998.8	3265	6	2	-3	2	3	multi-exon	FALSE	canonical	3	145	junction_5	11.9833217431562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	48140497	48340502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587
Isoform_57953_3	chr5	+	2662	5	NNC	ENSMUSG00000031558.16	novel	3210	5	NA	NA	1	11968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	72.0151893700211	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATTTTAAGATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	48140496	48159642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48159260
Isoform_57955_13	chr5	+	1565	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	51	0	51	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529721	48546187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
Isoform_57957_3	chr5	+	400	2	ISM	ENSMUSG00000097145.6	ENSMUST00000199547.5	437	3	12	1444	5	-1444	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52348025	52350405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_52348280_52350259
Isoform_57958_4	chr5	+	3125	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	13	1	13	-1	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCATTGTTCTGTGTAT	NA	False	NA	6	True	AATAAA	-15	NA	52898928	52926681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
Isoform_57959_19	chr5	+	2784	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	23	2936	-9	1451	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAATTAAATGCATTT	NA	False	NA	NA	False	AATAAA	-6	NA	52940418	52977977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
Isoform_5796_6	chr11	-	3540	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-106	-2681	-106	994	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTAGTGGGTCTGATGT	NA	False	NA	-2	True	NA	NA	NA	69286265	69281756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
Isoform_57961_57	chr5	+	2471	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	14	0	14	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940409	52982007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
Isoform_57967_18	chr5	+	2675	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	113	1066	-1	-3	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTTCATACTCTGTT	NA	False	NA	10	True	AATAAA	-10	NA	52991466	53024073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
Isoform_5797_15	chr11	-	855	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	0	727	0	-727	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAAATGAATGCACTC	NA	False	NA	NA	False	AATAAA	-6	NA	69289060	69288071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69288708_69288841
Isoform_57970_76	chr5	+	938	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	318	junction_1	5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3391	False	NA	13	True	ATTAAA	-14	NA	53424463	53435882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53424701_53434484_53434542_53435238
Isoform_57971_434	chr5	+	892	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	30	0	-9	0	multi-exon	FALSE	canonical	3	318	junction_1	5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3437	False	NA	13	True	ATTAAA	-14	NA	53424509	53435882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53424701_53434484_53434542_53435238
Isoform_57974_4	chr5	+	4092	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-55	1215	-55	6	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53713120	53813485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57975_33	chr5	+	5270	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-20	2	-20	-2	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGTAGATGTCTTCT	NA	False	NA	10	True	AATAAA	-16	NA	53713155	53814698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57976_69	chr5	+	4052	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-15	1215	-15	6	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53713160	53813485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57984_7	chr5	+	4146	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	94	1219	-60	6	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53747649	53813485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57989_15	chr5	+	5214	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	220	6	220	-2	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGTAGATGTCTTCT	NA	False	NA	10	True	AATAAA	-16	NA	53748032	53814698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_5799_11	chr11	-	2648	13	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	8700	1132	-760	-1132	3prime_fragment	FALSE	canonical	3	11	junction_5	5.70270403697521	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	69295801	69290465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831
Isoform_57991_14	chr5	+	4203	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	18	1219	18	6	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53747830	53813485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57992_43	chr5	+	4002	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	219	1219	219	6	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATTTCAATATATGAT	NA	False	NA	12	True	ATTAAA	-23	NA	53748031	53813485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57993_6	chr5	+	5396	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	44	0	44	0	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTCTTCTGTGGGA	NA	False	NA	16	True	AATAAA	-22	NA	53747856	53814704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
Isoform_57998_13	chr5	+	2003	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	43	227	-9	0	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTGTCAGTTTGTAAA	NA	False	NA	8	True	AATAAA	-18	NA	53967011	54061080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_57999_13	chr5	+	2246	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	20	7	-1	-5	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTATACAGATATCTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	53966988	54061300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_58_17	ERCC-00062	+	1005	1	FSM	ERCC-00062A	DQ516786	1007	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	2	1007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00062_+_0_1000
Isoform_58000_14	chr5	+	1810	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	28	435	1	-208	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTAAGAAGTTTTCA	NA	False	NA	6	True	AATAAA	-20	NA	53966996	54060872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
Isoform_58001_9	chr5	+	3512	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	65	1357	-1	-234	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGGGTTGTGCTGA	NA	False	NA	10	True	AATAAA	-12	NA	54155905	54277042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_58002_6	chr5	+	3586	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-4	1352	-4	-229	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTTGTGCTGATTTTT	NA	False	NA	15	True	AATAAA	-17	NA	54155836	54277047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_58003_4	chr5	+	3661	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-86	1359	-86	-236	multi-exon	TRUE	canonical	3	168	junction_8	27.7566163655824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGTGTGGGGTTGTGCT	NA	False	NA	8	True	AATAAA	-10	NA	54155754	54277040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_58004_3	chr5	+	3740	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	58	1136	-8	-13	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGCATTTAGATTGTG	NA	False	NA	NA	False	TATAAA	-3	NA	54155898	54277263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_58005_3	chr5	+	3786	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	25	1123	25	0	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	54155865	54277276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
Isoform_58007_21	chr5	+	1871	4	FSM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	132	5	-25	-5	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCACGGTATATGTGT	1917	False	NA	NA	False	ATTAAA	-17	NA	63969837	64056963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_63969939_64033792_64033843_64053772_64053827_64055297
Isoform_58013_38	chr5	+	2367	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	3	-1	3	1	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGGTTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64250295	64285695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
Isoform_58015_73	chr5	+	2346	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	26	-3	26	3	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGTTTATTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	64250318	64285697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
Isoform_58020_32	chr5	+	4824	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-69	5	-69	0	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8447	False	NA	5	True	AATAAA	-15	NA	64387672	64508824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
Isoform_58022_5	chr5	+	3569	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-104	1295	-104	-1290	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTTCTTGCAGAGACA	8412	False	NA	7	True	AATAAA	-17	NA	64387637	64507534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
Isoform_58024_12	chr5	+	2775	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-56	-1693	-56	-627	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCAAAAAAAAAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	64960863	64982145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
Isoform_58026_317	chr5	+	1076	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-54	4	-54	-4	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGATGTGCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	64960865	64980448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
Isoform_58035_17	chr5	+	5086	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	133	2	-56	-2	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATAATCATGTGATTA	NA	False	NA	6	True	AATAAA	-14	NA	64960863	64990242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
Isoform_58045_4	chr5	+	1893	5	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	64	18401	64	-3949	5prime_fragment	FALSE	canonical	3	68	junction_1	10.0591997693654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATTTAAAGAGGGCA	NA	False	NA	17	True	AATAAA	-14	NA	65264945	65307048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931
Isoform_58047_14	chr5	+	2410	6	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	64	10631	64	3821	5prime_fragment	FALSE	canonical	3	58	junction_5	13.0843417870369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTAGTGTTTAGAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	65264945	65314818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397
Isoform_58048_8	chr5	+	2466	6	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	8	10631	8	3821	5prime_fragment	FALSE	canonical	3	58	junction_5	13.0843417870369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTAGTGTTTAGAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	65264889	65314818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397
Isoform_5805_4	chr11	-	3212	5	FSM	ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	-32	3	-32	-3	multi-exon	FALSE	canonical	3	7	junction_4	2.17944947177034	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCAGAAGGCTGGAAAAT	NA	False	NA	-2	True	TTTAAA	-4	NA	69451063	69444920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69450517
Isoform_58050_4	chr5	+	3210	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	23	-84	23	2	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAACTGACGTGGTT	NA	False	NA	NA	False	TTTAAA	-18	NA	65264904	65325533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_58051_13	chr5	+	3136	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	8	5	8	-5	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAATGTTCTGGTTAA	NA	False	NA	NA	False	TATAAA	-31	NA	65264889	65325444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_58052_14	chr5	+	3010	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	8	131	8	-131	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTGTCTGAATTGTTT	NA	False	NA	1	True	NA	NA	NA	65264889	65325318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
Isoform_58057_11	chr5	+	1200	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	21	-3949	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	25.9121593079388	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATTTAAAGAGGGCA	NA	False	NA	17	True	AATAAA	-14	NA	65264902	65307048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306880
Isoform_58059_5	chr5	+	3398	26	FSM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	-3	-14	-3	14	multi-exon	FALSE	canonical	3	27	junction_5	5.73606136647787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTATAAATTAATAAGAGC	8568	False	NA	NA	False	NA	NA	NA	65357056	65401943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462
Isoform_5806_4	chr11	-	1095	5	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15643	-5	241	4	intron_retention	FALSE	canonical	3	153	junction_4	13.7908484148003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGTGTCTGTTCGGGG	NA	False	NA	1	True	TATAAA	-20	NA	69454507	69452579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129
Isoform_58060_3	chr5	+	6259	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	21	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAACATTTTCCTGGA	8571	False	NA	NA	False	AATAAA	-15	NA	65357059	65417750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
Isoform_58061_6	chr5	+	4388	37	FSM	ENSMUSG00000037890.14	ENSMUST00000041892.13	4401	37	8	5	6	0	multi-exon	FALSE	canonical	3	17	junction_26	8.39311887467611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACATTTTCCTGGATTT	8560	False	NA	NA	False	AATAAA	-18	NA	65357048	65417753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
Isoform_58062_6	chr5	+	2253	4	NIC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23652	-10	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.6058497173413	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAAATTTTGTTGTC	NA	False	NA	14	True	AAGAAA	-10	NA	65529402	65541340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_65529554_65533022_65533292_65536270_65537415_65540651
Isoform_58064_76	chr5	+	2670	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23579	10	23485	-10	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAAATTTTGTTGTC	NA	False	NA	14	True	AAGAAA	-10	NA	65529235	65541340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
Isoform_5807_4	chr11	-	989	6	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15636	-2	234	1	3prime_fragment	FALSE	canonical	3	116	junction_5	25.3092868330975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCATTGTGTCTGTTCG	NA	False	NA	-2	True	TATAAA	-17	NA	69454514	69452582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372
Isoform_58070_5	chr5	+	3167	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23569	-477	23475	477	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAACCAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	65529225	65541827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
Isoform_58074_30	chr5	+	1590	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	49	29	2	-29	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTTTTCTTAAAAAGA	6935	False	NA	19	True	TATAAA	-19	NA	65548888	65566521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
Isoform_58079_5	chr5	+	2244	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	63	2586	5	374	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGATGTGACGGCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	65694638	65753745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_5808_133	chr11	-	1787	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	102	2	102	-2	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69470048	69452586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_58080_5	chr5	+	3455	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	88	1350	1	-1291	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTTTTTTATATTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65694663	65754981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_58082_25	chr5	+	1584	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	71	3238	13	-5	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTGACATTAATTTT	NA	False	NA	21	True	AATAAA	-22	NA	65694646	65753093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
Isoform_5809_4	chr11	-	2844	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	-955	2	-24	-2	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69471105	69452586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_58090_5	chr5	+	2509	9	ISM	ENSMUSG00000037795.15	ENSMUST00000201615.4	4767	14	-151	10588	-10	2489	5prime_fragment	FALSE	canonical	3	26	junction_3	21.6101827849743	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCCCCAAACAAGAGC	NA	False	NA	NA	False	AAAAAG	-36	NA	65921311	65964039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532
Isoform_58092_159	chr5	+	1003	10	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	158.165251915774	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833582	66844574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844326_66844347
Isoform_58093_4	chr5	+	1521	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-2	2	intron_retention	FALSE	canonical	3	449	junction_3	34.4211610282194	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833582	66844574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_66833666_66833778_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
Isoform_58094_3	chr5	+	982	8	NNC	ENSMUSG00000029223.13	novel	980	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	377	junction_7	54.5904977901795	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTGGTTTTTATTTT	NA	False	NA	28	True	AATAAA	-17	NA	66834208	66844572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
Isoform_58095_26	chr5	+	2424	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	118	3705	-13	1097	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTGATTTCTAATGA	NA	False	NA	13	True	AATAAA	-20	NA	67418025	67445099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
Isoform_58099_4	chr5	+	1895	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-27	3454	19	1348	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTAAAGTACAAGATGT	NA	False	NA	NA	False	NA	NA	NA	67418012	67445350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
Isoform_58100_11	chr5	+	1631	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-14	3705	-13	1097	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTGATTTCTAATGA	NA	False	NA	13	True	AATAAA	-20	NA	67418025	67445099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
Isoform_58104_4	chr5	+	2328	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	128	3708	37	1094	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACATACTGATTTCTAA	NA	False	NA	10	True	AATAAA	-17	NA	67418275	67445096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
Isoform_58106_7	chr5	+	1038	3	FSM	ENSMUSG00000029221.16	ENSMUST00000159907.3	383	3	-219	-436	0	436	multi-exon	FALSE	canonical	3	16	junction_2	210.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTTTTTTTTAATTT	396	False	NA	NA	False	AATAAA	-13	NA	67464307	67476694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67464541_67473020_67473189_67476057
Isoform_58107_273	chr5	+	3044	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	3	2664	3	-7	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTTGTTACGGTAGTT	389	False	NA	8	True	AATAAA	-11	NA	67464300	67513122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_58108_4	chr5	+	3390	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	32	2289	22	368	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGTTTCCAGTGTGCA	418	False	NA	NA	False	AATAAA	-28	NA	67464329	67513497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_5811_3	chr11	-	1959	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	40	-2	intron_retention	FALSE	canonical	3	103	junction_5	30.2321745000256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69470110	69452586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
Isoform_58110_9	chr5	+	2853	16	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	109.607096282839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTTGTTACGGTAGTT	388	False	NA	8	True	AATAAA	-11	NA	67464299	67513122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_58111_9	chr5	+	3030	18	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	108.293143108373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTTGTTACGGTAGTT	400	False	NA	8	True	AATAAA	-11	NA	67464311	67513122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_67464541_67473020_67473189_67482019_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
Isoform_58112_4	chr5	+	1851	12	ISM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	17	6251	-10	-16	5prime_fragment	FALSE	canonical	3	69	junction_8	27.2175198802123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	69714320	69724196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703
Isoform_58113_7	chr5	+	3403	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	23	7	-4	-7	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGTCTTGATACTGG	NA	False	NA	NA	False	AATACA	-9	NA	69714326	69730440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_58114_14	chr5	+	2077	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-17	1373	-9	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714286	69729074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_58115_3	chr5	+	2304	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-4	1133	4	196	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTATGTCTGATATG	NA	False	NA	NA	False	NA	NA	NA	69714299	69729314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
Isoform_58116_7	chr5	+	1709	11	FSM	ENSMUSG00000029208.17	ENSMUST00000132169.8	1752	11	27	16	-8	-16	multi-exon	FALSE	canonical	3	43	junction_8	34.8122105014893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	69714322	69724196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703
Isoform_58117_20	chr5	+	757	3	FSM	ENSMUSG00000046808.18	ENSMUST00000169617.3	761	3	1	3	1	-3	multi-exon	FALSE	canonical	3	101	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGATGGGGTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	72360672	72387815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_72360907_72384974_72385302_72387619
Isoform_58118_6	chr5	+	1438	6	FSM	ENSMUSG00000067219.10	ENSMUST00000087212.8	4206	6	7	2761	7	694	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2046	False	NA	NA	False	TATAAA	-24	NA	72805144	72825660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_72805277_72816024_72816292_72818098_72818156_72820876_72820968_72824118_72824280_72824930
Isoform_5812_4	chr11	-	1075	5	ISM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	238	3	238	-2	intron_retention	FALSE	canonical	3	9	junction_4	73.4315157136226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGAGTCATTGTGTCTG	NA	False	NA	-6	True	TATAAA	-13	NA	69454510	69452586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454145
Isoform_58120_6	chr5	+	4840	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATCTTCCAAGTGTTT	NA	False	NA	14	True	AATAAA	-33	NA	73071639	73136172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_58121_24	chr5	+	4789	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	55	-11	-10	11	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTATTAATTTCT	NA	False	NA	25	True	AATAAA	-44	NA	73071701	73136183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_58123_31	chr5	+	2429	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	62	2342	-3	1785	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTCTGACTAATTAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	73071708	73133830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_58124_17	chr5	+	2499	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-7	2341	-7	1786	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCTGACTAATTAAATT	NA	False	NA	NA	False	AATAAA	-21	NA	73071639	73133831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_58125_9	chr5	+	4422	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-14	425	-14	-407	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTGAATCATTTT	NA	False	NA	27	True	AATAAA	-40	NA	73071632	73135747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
Isoform_58128_83	chr5	+	1429	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450145	73471284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_58129_7	chr5	+	3358	7	FSM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	-5	1	4	-1	multi-exon	FALSE	canonical	3	746	junction_1	115.10683443364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCGTTGCTTGAAAGAT	NA	False	NA	15	True	AATAAA	-26	NA	73450130	73466707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
Isoform_5813_48	chr11	-	2979	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-131	-6	-18	6	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTGTGTGTGCTTGTC	NA	False	NA	-1	True	AATAAA	-39	NA	69496786	69490555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
Isoform_58132_393	chr5	+	1377	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	18	128	3	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450152	73471284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_58134_17	chr5	+	1511	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	11	1	-4	-1	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTCTTTTTTTTAAA	NA	False	NA	13	True	AATACA	-6	NA	73450145	73471411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_58136_8	chr5	+	1417	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	-22	128	-14	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450112	73471284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
Isoform_58137_16	chr5	+	4068	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	49	-1	15	1	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTGGGGTCTTTGTA	NA	False	NA	16	True	AATAAA	-27	NA	73648424	73718134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_58138_5	chr5	+	4169	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	50.51094309059	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTGGGGTCTTTGTA	NA	False	NA	16	True	AATAAA	-27	NA	73648402	73718134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_58139_12	chr5	+	4055	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8200	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	8142	False	NA	12	True	AATAAA	-23	NA	73660010	73718130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
Isoform_5814_3	chr11	-	1613	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-157	1386	-44	236	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTTTCCTCAACTT	NA	False	NA	NA	False	AATAGA	-20	NA	69496812	69491947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
Isoform_58141_25	chr5	+	311	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	36	689	36	-689	multi-exon	FALSE	canonical	3	72	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACCAAAAGCTTCATT	NA	False	NA	NA	False	NA	NA	NA	74253779	74254308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74253801_74254018
Isoform_58142_5	chr5	+	1045	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	-10	1	-4	-1	multi-exon	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTTCACTTGTTC	NA	False	NA	17	True	AATAAA	-19	NA	74253733	74254996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74253801_74254018
Isoform_58143_13	chr5	+	585	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	-12	2	5	-1	multi-exon	FALSE	canonical	3	72	junction_1	23.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTTCACTTGTTC	NA	False	NA	17	True	AATAAA	-19	NA	74253725	74254996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74253801_74254018_74254081_74254548
Isoform_58144_4	chr5	+	751	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	36	0	intron_retention	FALSE	canonical	3	119	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_74254081_74254548
Isoform_58145_11	chr5	+	1810	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	2	0	2	0	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGGTCTTTATT	NA	False	NA	21	True	AATAAA	-23	NA	74355948	74360142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
Isoform_58146_5	chr5	+	2175	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	1	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	215.964760499897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696140	74756807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58147_3	chr5	+	2148	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	229.420784136424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696140	74756807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58149_20	chr5	+	2109	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	9	2651	1	4	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696140	74756810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_5815_9	chr11	-	2990	7	NNC	ENSMUSG00000041329.14	novel	2842	7	NA	NA	-31	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.8531628231289	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTGTGTGTGCTTGTC	NA	False	NA	-1	True	AATAAA	-39	NA	69496799	69490555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_69492239_69492350_69492448_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
Isoform_58151_4	chr5	+	4744	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	14	11	1	-1	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGAAGTTTGGTCATT	NA	False	NA	12	True	AATAAA	-21	NA	74696145	74759450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58152_5	chr5	+	2169	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	2	2598	2	57	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAGAAAGTAATGTGAATT	NA	False	NA	79	True	AATAAA	-21	NA	74696133	74756863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58154_15	chr5	+	2068	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	220	junction_12	176.742209428733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696151	74756807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58156_29	chr5	+	1977	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	52	2644	-2	1	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696161	74756807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58158_6	chr5	+	4614	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	-1	-2644	1	-1	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGAAGTTTGGTCATT	NA	False	NA	12	True	AATAAA	-21	NA	74696140	74759450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_58159_17	chr5	+	1965	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	8	-4	5	4	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTTGTCTTGTAATA	NA	False	NA	26	True	AATAAA	-27	NA	74696149	74756810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
Isoform_5816_312	chr11	-	1261	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	53	7	-2	-7	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTGTGTTTAGTGT	6814	False	NA	-11	True	AATAAA	-26	NA	69553415	69547529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
Isoform_58161_5	chr5	+	3403	4	ISM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	39	43193	39	-7420	5prime_fragment	FALSE	canonical	3	1215	junction_3	73.8707580094376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAAGGCATTGT	805	False	NA	NA	False	AAGAAA	-25	NA	75735653	75774189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466
Isoform_58163_26	chr5	+	5191	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	43	7	4	-7	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATAAATTTTTCTGT	770	False	NA	7	True	NA	NA	NA	75735618	75817375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_58164_261	chr5	+	5156	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	78	7	39	-7	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATAAATTTTTCTGT	805	False	NA	7	True	NA	NA	NA	75735653	75817375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_58167_141	chr5	+	5168	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	39	7	39	-7	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAATAAATTTTTCTGT	805	False	NA	7	True	NA	NA	NA	75735653	75817375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
Isoform_5817_94	chr11	-	1305	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	11	5	11	-5	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6772	False	NA	-9	True	AATAAA	-28	NA	69553457	69547527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
Isoform_58172_55	chr5	+	1729	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	39	-21	4	-4	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGCAGTCTCTCTCT	NA	False	NA	36	True	NA	NA	NA	76288156	76303347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
Isoform_58175_5	chr5	+	1358	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	36	4090	-34	0	5prime_fragment	FALSE	canonical	3	1062	junction_3	59.9462722406953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAGAAAAAAAAAAC	572	False	NA	NA	False	NA	NA	NA	76331762	76353002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483
Isoform_58176_127	chr5	+	1843	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	54	0	-16	0	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	590	False	NA	7	True	AATAAA	-15	NA	76331780	76357092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
Isoform_5818_5	chr11	-	1401	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	-88	8	-88	-8	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAAATTGTGTTTAGTG	6673	False	NA	-12	True	AATAAA	-25	NA	69553556	69547530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
Isoform_58181_3	chr5	+	2523	17	ISM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	-1	3115	-1	-24	5prime_fragment	FALSE	canonical	3	86	junction_10	34.8881583599651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCATGGTTTTGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	76677156	76715026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803
Isoform_58182_75	chr5	+	3344	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	17	10	0	-1	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTGATAATATTCTT	NA	False	NA	7	True	AATAAA	-17	NA	76677174	76718131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
Isoform_58183_28	chr5	+	3313	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	-30	-11	0	4	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTAAGCCTTATAAATC	NA	False	NA	21	True	AATAAA	-31	NA	76677174	76718145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
Isoform_58185_6	chr5	+	2033	13	ISM	ENSMUSG00000036403.16	ENSMUST00000130651.2	5629	24	17	27953	14	-27953	5prime_fragment	FALSE	canonical	3	26	junction_1	4.68078222332787	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTGCAGGTTACAG	NA	False	NA	NA	False	NA	NA	NA	76736561	76764802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649
Isoform_58186_3	chr5	+	2797	20	ISM	ENSMUSG00000036403.16	ENSMUST00000130651.2	5629	24	11	11204	8	-11204	5prime_fragment	FALSE	canonical	3	24	junction_14	5.03560728415368	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAGAGATGAAGA	NA	False	NA	NA	False	NA	NA	NA	76736555	76781551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519
Isoform_58187_107	chr5	+	2106	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	-53	-191	8	-1	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	294	False	NA	14	True	ATTAAA	-17	NA	77099161	77115351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_5819_14	chr11	-	1298	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-2	-325	-2	-5	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6814	False	NA	-9	True	AATAAA	-28	NA	69553415	69547527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
Isoform_58190_62	chr5	+	2052	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	288	5	-141	-1	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	615	False	NA	14	True	ATTAAA	-17	NA	77099482	77115351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_58192_1981	chr5	+	2008	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	473	1	3	-1	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	759	False	NA	14	True	ATTAAA	-17	NA	77099626	77115351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_58194_221	chr5	+	2131	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	350	1	-120	-1	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	636	False	NA	14	True	ATTAAA	-17	NA	77099503	77115351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
Isoform_5820_8	chr11	-	1805	6	NIC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	628	junction_2	17.9844377170931	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTGTGTTTAGTGT	6814	False	NA	-11	True	AATAAA	-26	NA	69553415	69547529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69549525_69549636_69549703_69553294
Isoform_5821_17	chr11	-	1178	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-72	-460	-3	-5	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6813	False	NA	-9	True	AATAAA	-28	NA	69553416	69547527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
Isoform_58214_328	chr5	+	1658	16	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	23	4022	-1	769	5prime_fragment	FALSE	canonical	3	245	junction_6	30.8116860947271	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTTTGCTAATTCAA	NA	False	NA	NA	False	NA	NA	NA	77122552	77143762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624
Isoform_58220_48	chr5	+	3601	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	23	1	-1	-1	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCGGTATTGGCATTT	NA	False	NA	27	True	AATAAA	-35	NA	77122552	77147783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
Isoform_58225_83	chr5	+	1933	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	3	5068	3	-5068	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGAAGTCTGA	3699	False	NA	-28	True	NA	NA	NA	77413340	77429211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
Isoform_58226_24	chr5	+	2000	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-64	5068	-64	-5068	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGAAGTCTGA	3632	False	NA	-28	True	NA	NA	NA	77413273	77429211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
Isoform_5823_19	chr11	-	1201	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	27	2	27	-2	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	3277	False	NA	-3	True	AATAAA	-17	NA	69556952	69555040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
Isoform_5824_6	chr11	-	1243	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3237	False	NA	-1	True	AATAAA	-19	NA	69556992	69555038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
Isoform_58244_86	chr5	+	3800	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	345	0	1	0	multi-exon	FALSE	canonical	3	372	junction_9	39.992360381564	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458338	77497171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
Isoform_58245_3	chr5	+	4121	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	28	-4	28	4	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATCTTTGATTTCTC	NA	False	NA	20	True	AATAAA	-20	NA	77458021	77497175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
Isoform_58249_10	chr5	+	3311	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTATTTCCTTGTC	NA	False	NA	12	True	AATAAA	-20	NA	86952084	86984517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_5825_6	chr11	-	779	5	FSM	ENSMUSG00000018774.14	ENSMUST00000154124.2	612	5	-76	-91	15	-2	multi-exon	FALSE	canonical	3	24	junction_4	48.9540600971972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	3265	False	NA	-3	True	AATAAA	-17	NA	69556964	69555040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556845
Isoform_58253_5	chr5	+	3286	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-326	0	5	0	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952096	86984516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_58254_5	chr5	+	3293	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-25	1	-13	1	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTATTTCCTTGTC	NA	False	NA	12	True	AATAAA	-20	NA	86952066	86984517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
Isoform_58258_43	chr5	+	3571	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-36	1	-36	-1	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTGTTGGTTGTCT	NA	False	NA	10	True	AATAAA	-14	NA	88712862	88799250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
Isoform_58259_12	chr5	+	3354	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-65	247	-65	-247	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGGTTTAGTTATAG	NA	False	NA	NA	False	AATAAA	-8	NA	88712833	88799004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
Isoform_58260_7	chr5	+	2562	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	-8	151	8	-151	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAATCTAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	88868721	88905697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
Isoform_58262_133	chr5	+	2889	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	181	8	181	-8	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTCTGAGACTTTA	NA	False	NA	19	True	AATAAA	-16	NA	88913035	88931132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
Isoform_58264_4	chr5	+	3053	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	17	8	17	-8	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTCTGAGACTTTA	NA	False	NA	19	True	AATAAA	-16	NA	88912871	88931132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
Isoform_58265_3	chr5	+	2570	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	80	2418	80	-2418	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	91665553	91772335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
Isoform_58267_3	chr5	+	3476	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	0	-1480	0	-1	multi-exon	TRUE	canonical	3	9	junction_1	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTGTGGGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	92110762	92119924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
Isoform_58268_5	chr5	+	2441	12	FSM	ENSMUSG00000029407.11	ENSMUST00000201642.2	2427	12	-11	-3	8	1	multi-exon	FALSE	canonical	1	2	junction_2	139.72251130469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTCATTGTTCCCTT	NA	False	NA	14	True	AATAAA	-22	NA	92285813	92350658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_92286023_92300299_92300360_92335563_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
Isoform_58269_3	chr5	+	3571	13	FSM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	-17	-5	-8	5	multi-exon	FALSE	canonical	0	0	junction_12	129.019674425604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	92285788	92331919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756
Isoform_58271_105	chr5	+	3889	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	10	-1	1	0	multi-exon	FALSE	canonical	0	0	junction_12	100.480471444838	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285806	92350655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
Isoform_58273_13	chr5	+	3961	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-62	-1	-62	0	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285734	92350655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
Isoform_58274_3	chr5	+	6157	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	1	1	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAATATGGAGATTTTT	NA	False	NA	14	True	AATGAA	-19	NA	93073266	93113174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
Isoform_58283_203	chr5	+	5028	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241295	93322817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
Isoform_58288_39	chr5	+	5055	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-27	0	-27	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241268	93322817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
Isoform_58296_10	chr5	+	2442	10	NIC	ENSMUSG00000058013.12	novel	2428	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	236.171521683545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93241295	93324296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323262
Isoform_58297_7	chr5	+	1821	10	FSM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	-14	-15	0	5	multi-exon	FALSE	canonical	2	4	junction_9	237.094813560491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGAATTTGTTGTGA	NA	False	NA	19	True	TTTAAA	-31	NA	93241295	93324311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
Isoform_58300_30	chr5	+	2471	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	333	6	1	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCCTATTTCAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	93415448	93424084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_58301_6	chr5	+	2318	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	295	197	-37	-190	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTGTGTGATAATT	NA	False	NA	NA	False	CATAAA	-15	NA	93415410	93423893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_58303_3	chr5	+	2627	7	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	45	junction_3	9.41039614232874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCCTATTTCAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	93415448	93424084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93419139_93419221_93419321_93421196_93421403_93422732
Isoform_58307_10	chr5	+	2622	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	31	778	2	-778	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGGTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	96358004	96413790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
Isoform_58308_169	chr5	+	1097	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	41	2293	12	-2293	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358014	96412275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
Isoform_58309_8	chr5	+	3405	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	27	-1	-2	1	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCTTTATTCTATTA	NA	False	NA	NA	False	ATTAAA	-32	NA	96358000	96414569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
Isoform_58310_3	chr5	+	3256	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	-16	4	-16	-4	multi-exon	TRUE	canonical	0	0	junction_13	5.94053371578702	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACATTTTTGTATGGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	97145531	97217504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
Isoform_58311_234	chr5	+	1779	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	59	-5	0	5	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATACAGACGTGTGGA	NA	False	NA	20	True	AATAAA	-20	NA	100187902	100216624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
Isoform_58314_5	chr5	+	1464	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-43	-1	16	1	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187859	100216620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
Isoform_58317_493	chr5	+	1572	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	154	29	6	-6	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5427	False	NA	14	True	AATAAA	-16	NA	100666328	100695640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
Isoform_58318_19	chr5	+	1617	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	109	29	-25	-6	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5382	False	NA	14	True	AATAAA	-16	NA	100666283	100695640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
Isoform_58321_10	chr5	+	1499	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	455.54773007337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5415	False	NA	14	True	AATAAA	-16	NA	100666316	100695640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100695169
Isoform_58322_12	chr5	+	1520	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	442.714284273729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCAGTACTTGGTT	5399	False	NA	14	True	AATAAA	-16	NA	100666300	100695640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_100666417_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
Isoform_58324_433	chr5	+	517	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	116	5	0	-2	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTGAGTGGAAATGT	NA	False	NA	46	True	AATAAA	-28	NA	100946608	100952332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
Isoform_58325_11	chr5	+	661	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	-28	5	-28	-2	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTGAGTGGAAATGT	NA	False	NA	46	True	AATAAA	-28	NA	100946464	100952332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
Isoform_58326_7	chr5	+	458	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	7	-5	1	-2	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTGAGTGGAAATGT	NA	False	NA	46	True	AATAAA	-28	NA	100946609	100952332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
Isoform_58330_8	chr5	+	2889	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	-7	2	-7	-2	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGTTGCATTATTCT	NA	False	NA	3	True	AATAAA	-14	NA	100994077	101046963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
Isoform_58331_8	chr5	+	2925	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	-43	2	-43	-2	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGTTGCATTATTCT	NA	False	NA	3	True	AATAAA	-14	NA	100994041	101046963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
Isoform_58333_10	chr5	+	3977	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-54	1	-54	-1	multi-exon	TRUE	canonical	3	31	junction_6	11.4561361529774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCGCTGCTGTTTTCT	NA	False	NA	9	True	AATAAA	-18	NA	101912941	101971723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_58334_3	chr5	+	3718	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-37	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	17.1399468429099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGCGCTGCTGTTTT	NA	False	NA	7	True	AATAAA	-16	NA	101912958	101971721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
Isoform_58336_3	chr5	+	888	3	FSM	ENSMUSG00000092354.8	ENSMUST00000174864.2	787	3	-10	-91	0	-1	multi-exon	FALSE	canonical	3	40	junction_1	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAATTTCCTTTGGCTC	NA	False	NA	14	True	ATTAAA	-24	NA	101985307	101992197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_101985425_101989616_101989940_101991749
Isoform_58337_3	chr5	+	2693	2	ISM	ENSMUSG00000092354.8	ENSMUST00000174312.2	619	3	-38	4	-38	-4	intron_retention	FALSE	canonical	3	132	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTCAATTTCCTTTGG	NA	False	NA	11	True	ATTAAA	-21	NA	101987982	101992194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_101988098_101989616
Isoform_58338_28	chr5	+	900	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	-2	intron_retention	FALSE	canonical	3	132	junction_1	6	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCAATTTCCTTTGGCT	NA	False	NA	13	True	ATTAAA	-23	NA	101987967	101992196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_101988098_101989616_101989940_101991749
Isoform_58339_9	chr5	+	3446	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-313	56869	-4	0	5prime_fragment	FALSE	canonical	3	18	junction_6	10.5656622127096	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573053	103689300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
Isoform_58341_8	chr5	+	1399	7	FSM	ENSMUSG00000029313.19	ENSMUST00000126335.2	1613	7	33	181	33	-181	multi-exon	FALSE	canonical	3	248	junction_2	18.46994555728	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGTGACCGTCTGCCG	NA	False	NA	NA	False	NA	NA	NA	103840272	103964113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078
Isoform_58343_12	chr5	+	1527	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	-15	-11	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194376	104213234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_58344_44	chr5	+	1421	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	56	11	-43	-11	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194790	104213234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_58345_31	chr5	+	1475	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	2	11	2	-11	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194736	104213234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_58350_2275	chr5	+	1406	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	3	1	0	1	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTGGTGGTGTCAAT	NA	False	NA	30	True	AATAAA	-17	NA	104582986	104588915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
Isoform_58356_108	chr5	+	1458	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	-2	0	1	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTGGTGGTGTCAAT	NA	False	NA	30	True	AATAAA	-17	NA	104582986	104588915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
Isoform_58359_5	chr5	+	2200	6	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	-17	6493	-17	-6493	5prime_fragment	FALSE	canonical	3	61	junction_1	8.79545337091841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	104607418	104631693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
Isoform_58360_8	chr5	+	5127	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	90	2	-30	-2	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	NA	False	NA	7	True	AATAAA	-13	NA	104607405	104653683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
Isoform_58362_4	chr5	+	1589	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-32	-21862	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAGAAACCATTTAAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	104607403	104616324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_104608092_104614748_104614863_104615537
Isoform_58363_4	chr5	+	1069	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-5	-24906	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTAAACATTCCGC	NA	False	NA	NA	False	ATTAAA	-20	NA	104607430	104613280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_104608092_104611758_104611874_104612987
Isoform_58364_53	chr5	+	1382	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	13	3786	13	-3786	multi-exon	FALSE	canonical	3	13	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-11	NA	104656230	104666463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_104656438_104665288
Isoform_58366_3	chr5	+	4094	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	32	2600	32	-2600	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAACTGGAAAAC	3400	False	NA	115	True	NA	NA	NA	105563672	105635340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
Isoform_58367_8	chr5	+	4034	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-6	2698	-6	-2698	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGGACATTGTAGCAT	3362	False	NA	17	True	AATAAA	-24	NA	105563634	105635242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
Isoform_58369_12	chr5	+	2889	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	26	4061	-2	2085	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	NA	False	NA	NA	False	AATAAA	-27	NA	105667279	105756823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
Isoform_58370_9	chr5	+	2963	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-50	4063	-50	2083	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTTAAAGTTTTATT	NA	False	NA	NA	False	AATAAA	-25	NA	105667203	105756821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
Isoform_58372_67	chr5	+	3447	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-6	482	-6	-477	multi-exon	FALSE	canonical	3	145	junction_1	205.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTTTTTGGTTTT	4065	False	NA	19	True	ATTAAA	-19	NA	105847828	105962599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848121_105880095_105880241_105959589
Isoform_58373_41	chr5	+	3913	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	3	7	3	-2	multi-exon	FALSE	canonical	3	145	junction_1	205.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4074	False	NA	17	True	AATAAA	-28	NA	105847837	105963074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848121_105880095_105880241_105959589
Isoform_58378_157	chr5	+	3808	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	119	2	42	-2	multi-exon	FALSE	canonical	3	312	junction_1	122	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	5010	False	NA	17	True	AATAAA	-28	NA	105848773	105963074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_58380_275	chr5	+	3377	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	75	477	-2	-477	multi-exon	FALSE	canonical	3	312	junction_1	122	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTTTTTGGTTTT	4966	False	NA	19	True	ATTAAA	-19	NA	105848729	105962599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_58381_11	chr5	+	3894	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	32	3	11	-3	multi-exon	FALSE	canonical	3	312	junction_1	122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4923	False	NA	16	True	AATAAA	-27	NA	105848686	105963073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_58382_29	chr5	+	3473	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	-21	477	-21	-477	multi-exon	FALSE	canonical	3	312	junction_1	122	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTTTTTGGTTTT	4870	False	NA	19	True	ATTAAA	-19	NA	105848633	105962599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_105848952_105880095_105880241_105959589
Isoform_58388_12	chr5	+	4262	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	-2	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4968	False	NA	17	True	AATAAA	-28	NA	105848731	105963074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
Isoform_58392_17	chr5	+	3555	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	21	-475	intron_retention	TRUE	canonical	3	20	junction_1	251.968692940655	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTTTTTTGGTTTTTT	4989	False	NA	21	True	ATTAAA	-21	NA	105848752	105962601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
Isoform_58393_13	chr5	+	4007	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	42	-2	intron_retention	FALSE	canonical	3	20	junction_1	251.968692940655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	5010	False	NA	17	True	AATAAA	-28	NA	105848773	105963074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
Isoform_58399_16	chr5	+	1006	7	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	0	19250	0	63	5prime_fragment	FALSE	canonical	3	25	junction_1	3.39934634239519	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAACAGTGAAAAATA	NA	False	NA	NA	False	AAGAAA	-45	NA	106024433	106044434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357
Isoform_58400_3	chr5	+	495	4	ISM	ENSMUSG00000029290.13	ENSMUST00000138615.8	1554	10	-38	23861	-27	3285	5prime_fragment	FALSE	canonical	2	3	junction_3	11.4309521329882	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGACTATTGCTCG	NA	False	NA	NA	False	NA	NA	NA	106024403	106039182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983
Isoform_58401_3	chr5	+	568	5	ISM	ENSMUSG00000029290.13	ENSMUST00000138615.8	1554	10	-32	18607	-21	65	5prime_fragment	FALSE	canonical	2	3	junction_3	12.0830459735946	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAGTGAAAAATATG	NA	False	NA	NA	False	NA	NA	NA	106024409	106044436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983_106039183_106044357
Isoform_58402_124	chr5	+	2943	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	25	-7	25	7	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTATTTAAAGAGTAAT	NA	False	NA	17	True	AATAAA	-22	NA	107112212	107132305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_58403_9	chr5	+	2920	12	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	25	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	76.50290331011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112212	107132303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127181_107127311_107130829
Isoform_58404_17	chr5	+	2881	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	-10	-7	-10	6	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112177	107132304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_58405_18	chr5	+	2818	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	47	-1	-12	0	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112234	107132298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_58406_4	chr5	+	4302	10	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-26	6	intron_retention	FALSE	canonical	3	232	junction_7	20.9290394275042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112220	107132304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_58407_13	chr5	+	3133	12	FSM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	-1	-3	-1	2	multi-exon	FALSE	canonical	3	16	junction_1	77.2190187680738	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATACTTATTTAAAGA	NA	False	NA	12	True	AATAAA	-17	NA	107112425	107132300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
Isoform_58408_69	chr5	+	2279	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-14	3	0	-3	multi-exon	TRUE	canonical	3	138	junction_1	12.1951720866178	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTTTTTCAGAAGCTG	NA	False	NA	23	True	AATAAA	-16	NA	107745586	107809701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
Isoform_58410_27	chr5	+	903	7	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	37	1724	-33	-769	5prime_fragment	FALSE	canonical	3	7026	junction_3	276.122406431158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTACAATTCTCTAGG	NA	False	NA	NA	False	NA	NA	NA	108048404	108055147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054
Isoform_58411_4679	chr7	-	1020	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071641.5	1019	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4679	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	114305470	114304450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_114304400_114305500
Isoform_58412_39	chr5	+	1974	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	71	0	1	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048438	108056871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_58414_13	chr5	+	1892	7	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-24	0	intron_retention	FALSE	canonical	3	7026	junction_3	376.251688811271	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048413	108055916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108052761_108055054_108055144_108055762
Isoform_58415_6	chr5	+	1378	8	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	2625.0489752477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048504	108055916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_108048938_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_58416_12	chr5	+	1143	8	NIC	ENSMUSG00000058558.13	novel	834	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	2625.0489752477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048739	108055916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_108048938_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
Isoform_58424_76	chr5	+	267	3	FSM	ENSMUSG00000058558.13	ENSMUST00000140659.2	1024	3	757	0	757	0	multi-exon	FALSE	canonical	3	7486	junction_1	330	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108052736	108055916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108052761_108055054_108055144_108055762
Isoform_58446_4	chr5	+	2259	15	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-73	53095	-34	6745	5prime_fragment	FALSE	canonical	2	57	junction_12	11.2784786931861	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGCTTACATCTTAAGT	1070	False	NA	NA	False	AGTAAA	-5	NA	108280706	108328399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263
Isoform_58447_67	chr5	+	3066	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	17	2	17	-2	multi-exon	FALSE	canonical	3	201	junction_1	9	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTTATATTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	108416779	108428390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108417676_108423434_108423599_108426384
Isoform_58448_25	chr5	+	4376	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	198	-1	171	1	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTGTCTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	108460672	108497222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
Isoform_58449_4	chr5	+	4230	14	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	18.924327663481	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTTTGTCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	108460678	108497221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484089_108484227_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
Isoform_58450_3	chr5	+	3051	8	FSM	ENSMUSG00000033623.14	ENSMUST00000112597.8	2169	8	-3	-879	-3	879	multi-exon	FALSE	canonical	3	120	junction_2	4.29047354790892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGTGTTTAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	108609094	108637969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701
Isoform_58453_6	chr5	+	3792	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	38	3878	38	-3878	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATCTGTGCGTTCAGCT	NA	False	NA	7	True	AATATA	-11	NA	108609135	108650964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
Isoform_58455_12	chr5	+	1410	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	5	3687	5	-21	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAGATTTTGCATCTG	NA	False	NA	7	True	ATTAAA	-15	NA	108777702	108792961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
Isoform_58457_32	chr5	+	2448	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-16	1524	-16	-5	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTCTTTTGAACATT	NA	False	NA	NA	False	AATAAA	-20	NA	108777681	108795124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
Isoform_58460_3	chr5	+	2377	10	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	27	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	41.1801222574169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAAAGAATTTCTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	108777662	108795118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790904_108791070_108792033_108792113_108792422_108792559_108793704
Isoform_58461_3	chr5	+	1543	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-161	1575	16	-20	5prime_fragment	FALSE	canonical	3	25	junction_1	34.906223577529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGATTTTGCATCTGA	NA	False	NA	8	True	ATTAAA	-16	NA	108777713	108792962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
Isoform_58463_61	chr5	+	3169	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	202	2	-3	-2	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGCCTCCCAAGTCT	NA	False	NA	15	True	NA	NA	NA	108817173	108832421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
Isoform_58465_9	chr5	+	2651	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-271	-51	1	23	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGTTTTTACCT	NA	False	NA	27	True	AAGAAA	-14	NA	108842096	108854813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_58466_9	chr5	+	2436	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-53	-54	-53	26	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108842314	108854816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_58468_6	chr5	+	2493	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATTGCCTCCTTTTCTC	NA	False	NA	9	True	NA	NA	NA	108842093	108854795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_58469_4	chr5	+	2524	6	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	221	-54	221	26	3prime_fragment	FALSE	canonical	3	93	junction_1	8.84081444212014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTTTACCTGGG	NA	False	NA	30	True	AAGAAA	-17	NA	108842588	108854816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
Isoform_58470_3	chr5	+	470	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	273	1674	273	552	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAACCCTATGAATGT	NA	False	NA	NA	False	NA	NA	NA	110071538	110090128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
Isoform_58471_9	chr5	+	457	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	-3	-3	-2	3	multi-exon	FALSE	canonical	3	208	junction_1	18.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGTGTCTGATTTGT	8368	False	NA	NA	False	NA	NA	NA	110144384	110155336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110144500_110154809_110154937_110155121
Isoform_58473_12	chr5	+	2953	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	176	29	-68	-29	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTGTCTATT	2125	False	NA	NA	False	NA	NA	NA	110258133	110277631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_58475_3	chr5	+	3136	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-41	-2347	-26	-29	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTGTCTATT	2167	False	NA	NA	False	NA	NA	NA	110258175	110277631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
Isoform_58477_54	chr5	+	3202	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283743	110319836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58478_14	chr5	+	3221	19	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	100.199800399003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283721	110319836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58480_254	chr5	+	3165	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	-7	1	0	1	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283707	110319836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58482_58	chr5	+	3126	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	18	2	0	1	multi-exon	FALSE	canonical	3	81	junction_11	67.7699140155478	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283743	110319836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58483_8	chr5	+	2910	17	FSM	ENSMUSG00000014668.16	ENSMUST00000198633.5	2623	17	22	-309	1	-1	multi-exon	FALSE	canonical	3	10	junction_5	84.7737568104068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283744	110319834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58484_20	chr5	+	3122	18	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	73.7381038437897	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283727	110319835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58485_5	chr5	+	3146	18	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	91.8634084559722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283701	110319836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58486_8	chr5	+	3039	17	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	81.0771237773023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283734	110319837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
Isoform_58492_9	chr5	+	4638	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	178	3316	0	-47	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGTGGCTTTCTTT	NA	False	NA	33	True	NA	NA	NA	110324744	110371020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_58493_7	chr5	+	3136	14	ISM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-22	17329	0	-17329	5prime_fragment	FALSE	canonical	3	55	junction_3	19.4951063499955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTGAGCAGCATACAC	NA	False	NA	NA	False	AATAGA	-26	NA	110324722	110353738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642
Isoform_58494_4	chr5	+	4755	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	0	50	0	-50	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATGCTCTGGTGGCTTTC	NA	False	NA	30	True	NA	NA	NA	110324744	110371017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
Isoform_58495_3	chr5	+	2828	12	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	6	15355	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	32.3820172522083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAAGGAGCAGTTTGTT	NA	False	NA	NA	False	AAAACA	-9	NA	110324768	110351634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585
Isoform_58498_6	chr5	+	3225	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	-23	875	-23	-875	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGTATCCTGAATAAC	NA	False	NA	-70	True	NA	NA	NA	110378846	110402460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_58499_3	chr5	+	5246	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	7	-1176	7	-2	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTGATGTCTGGGAGA	NA	False	NA	13	True	ATTAAA	-15	NA	110378876	110404511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_58501_4	chr5	+	3274	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	-37	1978	0	-800	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATGTCTGATATTTT	NA	False	NA	5	True	AATACA	-15	NA	110378869	110402535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
Isoform_58502_60	chr5	+	749	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	-3	1	-3	-1	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTGTTCTGTTTTGTG	NA	False	NA	8	True	AATAAA	-14	NA	110434203	110439100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
Isoform_58503_9	chr5	+	3552	29	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	35	24523	0	4784	5prime_fragment	FALSE	canonical	2	122	junction_13	52.0765111178167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTACTAGAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	110434206	110460817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771
Isoform_58504_6	chr5	+	689	4	FSM	ENSMUSG00000072754.10	ENSMUST00000100924.5	692	4	1	2	1	-2	multi-exon	FALSE	canonical	3	17	junction_1	4.71404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGTCCAGTCCATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	110501962	110503958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110502160_110502356_110502483_110502590_110502717_110503718
Isoform_58505_4	chr5	+	2933	11	FSM	ENSMUSG00000033316.15	ENSMUST00000040001.14	2883	11	-47	-3	-47	1	multi-exon	FALSE	canonical	0	0	junction_4	1.48660687473185	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATACCTGTTGTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	110692173	110769244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110692809_110725305_110725487_110736107_110736275_110737634_110737810_110743931_110744130_110750446_110750565_110761943_110762130_110763262_110763401_110765703_110765800_110767030_110767199_110768373
Isoform_58507_279	chr5	+	2528	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	18	2300	18	325	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801334	110806062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_58510_4	chr5	+	3694	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	2	1150	2	-1150	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCCGGTGTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	110801318	110807212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_58511_4	chr5	+	2839	13	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	0	324	intron_retention	TRUE	canonical	3	94	junction_5	18.4458667456967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACAAATTCCCGATAGC	NA	False	NA	4	True	AATAAA	-15	NA	110801316	110806061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
Isoform_58514_86	chr5	+	2378	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	17	1	combination_of_known_junctions	TRUE	canonical	3	57	junction_1	67.6591457232502	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9216	False	NA	20	True	NA	NA	NA	110987882	111022000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
Isoform_58517_7	chr5	+	2253	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	26	1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_12	80.9591733845031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9225	False	NA	20	True	NA	NA	NA	110987891	111022000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
Isoform_58519_176	chr5	+	2248	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	17	11	17	1	multi-exon	FALSE	canonical	3	120	junction_1	48.9833895211386	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9216	False	NA	20	True	NA	NA	NA	110987882	111022000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
Isoform_58523_15	chr5	+	2132	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_11	68.5178679240099	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTTAGTAGTTTGT	9216	False	NA	20	True	NA	NA	NA	110987882	111022000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
Isoform_58524_4	chr5	+	2062	3	FSM	ENSMUSG00000033209.18	ENSMUST00000143505.2	1557	3	-26	-479	-7	479	multi-exon	FALSE	canonical	3	14	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCCTCCCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	111027661	111062661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_111027855_111040697_111040977_111061071
Isoform_58528_470	chr5	+	2755	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478626	111536225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
Isoform_58532_39	chr5	+	2673	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	433.102702158834	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478623	111536225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
Isoform_58536_192	chr5	+	1817	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	-3	-1	0	1	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424569	112463222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58537_19	chr5	+	1894	7	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424569	112463222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58539_29	chr5	+	901	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424573	112463222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58540_61	chr5	+	1799	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112436628	112463222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58541_5	chr5	+	1920	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	139.333433014318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTAGCTTTCTTCTCT	NA	False	NA	26	True	AATAAA	-36	NA	112436588	112463226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112436679_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58542_6	chr5	+	887	6	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	128.790372310977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112436628	112463222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112436679_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
Isoform_58544_118	chr5	+	2835	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	34	691	-29	109	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAGCTGATGAATAACG	NA	False	NA	19	True	AATAAA	-11	NA	112474257	112485248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
Isoform_58545_89	chr5	+	3527	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	32	1	-31	-1	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGGAAGTATATGGGTGT	NA	False	NA	13	True	AATAAA	-15	NA	112474255	112485938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
Isoform_58546_8	chr5	+	3288	14	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.6563543924319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490963	112526279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112490989_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58547_3	chr5	+	2792	14	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.5195248851138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTTCTGAGTGATCA	NA	False	NA	2	True	AATAAA	-8	NA	112490956	112526273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112490989_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58548_3	chr5	+	2292	13	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	0	6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	28.1227468233259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTTCTGAGTGATCA	NA	False	NA	2	True	AATAAA	-8	NA	112490948	112526273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_112490989_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58549_33	chr5	+	3342	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	2	1	2	-1	multi-exon	FALSE	canonical	3	34	junction_1	19.6098031274724	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490950	112526279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58551_45	chr5	+	2818	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	17	1	12	-1	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490977	112526279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58553_5	chr5	+	3617	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.7453300836086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490977	112526279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_112491030_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_58556_39	chr5	+	3242	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50729	8	996	-1	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTGCCCAGTTGTG	NA	False	NA	6	True	ATTAAA	-16	NA	113689041	113727778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
Isoform_58557_4	chr5	+	3347	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50623	9	890	-2	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGCTGCCCAGTTGT	NA	False	NA	5	True	ATTAAA	-15	NA	113688935	113727777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
Isoform_58560_45	chr5	+	3142	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-6	-3	-6	3	multi-exon	FALSE	canonical	3	46	junction_2	4.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCGTTGTCTCATCC	709	False	NA	NA	False	AATAAA	-14	NA	113873857	113878664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_113874111_113874881_113875234_113876127
Isoform_58562_6	chr5	+	1465	2	ISM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-2	2215	-2	-1456	intron_retention	FALSE	canonical	3	687	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	3648	False	NA	NA	False	GATAAA	-42	NA	113910861	113913644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_113911006_113912323
Isoform_58563_3	chr5	+	1196	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-2	201	-2	-201	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAACTTCT	3648	False	NA	NA	False	NA	NA	NA	113910861	113915658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
Isoform_58564_188	chr5	+	889	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	53	15	-2	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3648	False	NA	NA	False	AATAAA	-15	NA	113910861	113916334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
Isoform_58566_8	chr5	+	1123	5	FSM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	-5	-2	-5	2	multi-exon	FALSE	canonical	3	17	junction_4	304.763330307306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACTGAACCTGATT	3645	False	NA	NA	False	AATAAA	-17	NA	113910858	113916336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915140_113915893
Isoform_58567_14	chr5	+	2070	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	-2	2536	-2	1088	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCCTTTGTTTCCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	114238373	114260245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58568_14	chr5	+	2808	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	1	1795	1	-1795	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTCTTCTGGTCTAA	NA	False	NA	15	True	ATTAAA	-17	NA	114238376	114260986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58569_11	chr5	+	3393	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	1	1210	1	-1210	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCGGTGCTTTAGTCC	NA	False	NA	12	True	AATAAA	-23	NA	114238376	114261571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58570_7	chr5	+	3406	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-21	-1216	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCAAGTGCGGTGCTT	NA	False	NA	6	True	AATAAA	-17	NA	114238354	114261565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58575_4	chr5	+	2556	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19182	1216	8369	-1216	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCAAGTGCGGTGCTT	9283	False	NA	6	True	AATAAA	-17	NA	114257557	114261565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58576_4	chr5	+	1975	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19184	1795	8371	-1795	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTCTTCTGGTCTAA	9285	False	NA	15	True	ATTAAA	-17	NA	114257559	114260986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
Isoform_58579_512	chr5	+	1952	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	31	2	31	0	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGTGCCGACTATTCTT	NA	False	NA	21	True	AATAAA	-17	NA	114268477	114277382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_5858_4057	chr11	-	1771	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	1	0	0	multi-exon	TRUE	canonical	3	9657	junction_10	1402.57834362292	4057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
Isoform_58582_138	chr5	+	1893	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	242	1	-61	-1	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	20	True	AATAAA	-16	NA	114269228	114277381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_58583_309	chr5	+	1866	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	266	4	-37	-1	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCGGTGTGCCGACTAT	NA	False	NA	17	True	AATAAA	-13	NA	114269252	114277378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
Isoform_58587_17	chr5	+	1614	4	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	48499	1	-55	-1	3prime_fragment	FALSE	canonical	3	58	junction_1	12.0369800568452	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	5505	False	NA	6	True	AATAAA	-16	NA	114386338	114388819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114386380_114386644_114386816_114386935_114387073_114387554
Isoform_58588_4	chr5	+	1881	3	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-55	1	intron_retention	FALSE	canonical	3	80	junction_1	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	5505	False	NA	8	True	AATAAA	-18	NA	114386338	114388821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_114386816_114386935_114387073_114387554
Isoform_58589_12	chr5	+	2001	2	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-55	1	intron_retention	FALSE	canonical	3	86	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	5505	False	NA	8	True	AATAAA	-18	NA	114386338	114388821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_114387073_114387554
Isoform_58590_3	chr5	+	1499	5	ISM	ENSMUSG00000029577.14	ENSMUST00000130169.8	4888	27	0	31491	0	-2482	intron_retention	TRUE	canonical	3	262	junction_4	22.293496809608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	TATAAA	-9	NA	114518886	114527738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783
Isoform_58591_3	chr5	+	1644	12	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	222	20935	3	8075	5prime_fragment	FALSE	canonical	3	255	junction_8	26.3416836500756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATACATATTTAT	NA	False	NA	NA	False	NA	NA	NA	114518889	114538295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850
Isoform_58592_5	chr5	+	2659	19	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	221	12636	2	-2602	5prime_fragment	FALSE	canonical	3	252	junction_13	25.8968156677302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCCATGTTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	114518888	114546594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157
Isoform_58593_143	chr5	+	4966	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	224	4	-2	-3	multi-exon	FALSE	canonical	3	241	junction_19	27.3486858419916	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518891	114559226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
Isoform_58596_9	chr5	+	1712	12	NIC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	45.2173812847221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTTGGGCCCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	114582347	114598647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_58597_8	chr5	+	1710	11	FSM	ENSMUSG00000041939.15	ENSMUST00000112239.9	1602	11	1	-109	1	2	multi-exon	FALSE	canonical	3	9	junction_3	36.3257484437692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTTGGGCCCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	114582347	114598647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_58598_13	chr5	+	991	7	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-17	7441	3	0	5prime_fragment	FALSE	canonical	3	117	junction_1	10.1063786238637	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGGCTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	114582349	114591211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
Isoform_586_7	SIRV8002	+	3244	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4756	0	-4756	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACCTCTGAAGAGAAA	NA	False	NA	NA	False	AGTAAA	-28	NA	0	3244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_0_3200
Isoform_5860_98	chr11	-	1869	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	-96	1	10	0	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563239	69557762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
Isoform_58600_89	chr5	+	1671	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-17	6	3	1	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCCTTGGGCCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	114582349	114598646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
Isoform_58601_7	chr5	+	3527	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-604	7	-604	-7	multi-exon	FALSE	canonical	3	54	junction_1	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATGGTGTCTCAGCT	NA	False	NA	5	True	AAGAAA	-10	NA	114705472	114751274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114706486_114732401_114732529_114748887
Isoform_58604_24	chr5	+	2825	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	57	0	-2	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114845877	114860388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
Isoform_58606_77	chr5	+	3441	15	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	98.811508872774	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGTGAGTTTCATTT	1122	False	NA	26	True	AGTAAA	-16	NA	114913013	114943880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936578_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
Isoform_58608_548	chr5	+	3438	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	276	3	8	-3	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGTGAGTTTCATTT	1122	False	NA	26	True	AGTAAA	-16	NA	114913013	114943880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
Isoform_58613_5	chr5	+	2178	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGGTCCTCATTTGT	7858	False	NA	3	True	NA	NA	NA	115061322	115075971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
Isoform_58614_4	chr5	+	2258	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	-81	4	-57	-1	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGGTCCTCATTTG	7777	False	NA	2	True	NA	NA	NA	115061241	115075970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
Isoform_58615_16	chr5	+	2093	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	85	3	-73	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGGTCCTCATTTGT	7943	False	NA	3	True	NA	NA	NA	115061407	115075971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
Isoform_58617_95	chr5	+	1331	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	42	1234	-4	765	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCCTGGTCAGTGCT	NA	False	NA	26	True	AATAAA	-28	NA	115080258	115086608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_58619_7	chr5	+	1808	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	42	757	-4	-757	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTGGCCGTAGGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	115080258	115087085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_58621_3	chr5	+	1414	6	NIC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	-9	764	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	103.424175123614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCCTGGTCAGTGC	NA	False	NA	25	True	AATAAA	-27	NA	115080253	115086607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115080415_115083844_115083967_115084076_115084176_115084349_115084424_115085221_115085313_115085740
Isoform_58622_13	chr5	+	2975	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	227	2	-133	-2	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1710	False	NA	26	True	AATAAA	-14	NA	115149422	115236847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_58623_3	chr5	+	1991	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	153	1060	144	-526	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCACAGACATTGAATGAC	1636	False	NA	NA	False	ATTAAA	-31	NA	115149348	115235789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_58625_3	chr5	+	2506	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	160	538	151	-4	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGTATTTTTT	1643	False	NA	14	True	AATACA	-12	NA	115149355	115236311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
Isoform_58629_381	chr5	+	737	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2205	22	-6	3	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376099	115379028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_58630_9	chr5	+	816	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2126	22	-17	3	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376020	115379028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_58632_74	chr5	+	777	4	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	19	3	intron_retention	FALSE	canonical	3	770	junction_1	71.2242156073964	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376124	115379028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115378697
Isoform_58634_241	chr5	+	2003	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	30	4	1	-4	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCCTCAGATGTCACTT	NA	False	NA	17	True	AATAAA	-15	NA	115417754	115435027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
Isoform_58636_10	chr5	+	2109	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	27	-99	-2	99	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAGACAGTGTTGTAT	NA	False	NA	3	True	AGTAAA	-19	NA	115417751	115435130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
Isoform_58640_896	chr5	+	1169	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-8	1	-8	-1	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCGTGCAGTTGTCTTT	126	False	NA	38	True	AATATA	-17	NA	115465227	115471138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
Isoform_58643_14	chr5	+	1273	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-112	1	-112	-1	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCGTGCAGTTGTCTTT	22	False	NA	38	True	AATATA	-17	NA	115465123	115471138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
Isoform_58645_307	chr5	+	1045	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	25	18	25	-18	multi-exon	FALSE	canonical	3	209	junction_1	0	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTTGCTCCCAAAACC	2439	False	NA	26	True	AATAAA	-18	NA	115479308	115481610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115479477_115480733
Isoform_58646_9	chr5	+	2971	13	Fusion	ENSMUSG00000054256.12_ENSMUSG00000087292.2	novel	806	9	NA	NA	-3	-6	multi-exon	FALSE	canonical	2	9	junction_2	31.6227766016838	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	4779	False	NA	9	True	AATAAA	-9	NA	115497152	115593751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_58647_8	chr5	+	2947	13	Fusion	ENSMUSG00000054256.12_ENSMUSG00000087292.2	novel	806	9	NA	NA	7	-6	multi-exon	FALSE	canonical	2	9	junction_2	32.3525501313266	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	4770	False	NA	9	True	AATAAA	-9	NA	115497143	115593751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
Isoform_58648_34	chr5	+	3106	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	21	6	21	-6	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2410	False	NA	9	True	AATAAA	-9	NA	115567678	115593751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_58650_21	chr5	+	3067	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	27	-6	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2416	False	NA	9	True	AATAAA	-9	NA	115567684	115593751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
Isoform_58651_4	chr5	+	2796	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	-1	-305	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTTTATCTTTAATTT	2388	False	NA	NA	False	AATAAA	-19	NA	115567656	115593452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
Isoform_58652_5	chr5	+	3039	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	31	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	24.7218849935262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACTTGCCTTTATTCA	2420	False	NA	9	True	AATAAA	-9	NA	115567688	115593751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588845_115589034_115589515_115589580_115591884
Isoform_58655_25	chr5	+	3788	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-117	-1004	15	0	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCTGATGTTATTTCT	NA	False	NA	14	True	AATAAA	-18	NA	115644749	115694041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
Isoform_58657_300	chr5	+	3691	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	13	2	13	-2	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGATGTTATTTCTTGG	NA	False	NA	17	True	AATAAA	-21	NA	115644747	115694044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
Isoform_58660_12384	chr5	+	1095	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	48	215	-22	-215	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	12384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCGGTCTGGATTTAT	NA	False	NA	22	True	AATAAA	-16	NA	115697573	115701571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
Isoform_58662_226	chr5	+	1218	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	48	92	-22	-92	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTTTTTTGAGACA	NA	False	NA	25	True	ATTAAA	-22	NA	115697573	115701694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
Isoform_58672_46	chr8	-	724	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	297	-67	297	67	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	103592133	103591409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_103591400_103592100
Isoform_58680_11	chr5	+	2226	15	FSM	ENSMUSG00000041638.19	ENSMUST00000141472.8	2224	15	-1	-1	-1	1	multi-exon	TRUE	canonical	3	386	junction_9	39.4497872527307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115703329	115722298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456
Isoform_58681_113	chr5	+	2449	22	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	23	31586	1	3650	5prime_fragment	FALSE	canonical	3	352	junction_15	41.0233604154175	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCCAGAGATGTCTGAG	NA	False	NA	13	True	NA	NA	NA	115703335	115729127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032
Isoform_58683_3	chr5	+	4396	33	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	17	23072	-1	-11032	5prime_fragment	FALSE	canonical	3	352	junction_15	41.659660869359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAGCCAACATGGCAG	NA	False	NA	NA	False	TTTAAA	-33	NA	115703329	115737641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130
Isoform_58685_3	chr5	+	3945	22	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	39589	4	-853	2	3prime_fragment	FALSE	canonical	2	428	junction_15	65.2474445855415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115742901	115760709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
Isoform_58686_4	chr5	+	2678	14	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	47343	4	766	2	3prime_fragment	FALSE	canonical	2	428	junction_7	68.1203251476742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115750655	115760709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
Isoform_58688_7	chr5	+	2299	12	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	48532	3	-1086	3	3prime_fragment	FALSE	canonical	2	428	junction_5	72.9238253077872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGGAGTTTGTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	115751844	115760710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
Isoform_58692_431	chr5	+	2240	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	2	578	2	-578	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769968	115785217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_58695_43	chr5	+	2800	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	20	0	20	0	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGGGTCTGTCTGCTC	NA	False	NA	25	True	AATAAA	-21	NA	115769986	115785795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_58697_6	chr5	+	2343	5	NIC	ENSMUSG00000029518.16	novel	2820	6	NA	NA	-19	-578	intron_retention	FALSE	canonical	3	206	junction_4	16.8874953737966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769947	115785217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781759_115783691
Isoform_58699_7	chr5	+	2255	6	FSM	ENSMUSG00000029518.16	ENSMUST00000138885.2	966	6	-250	-1039	-17	-578	multi-exon	FALSE	canonical	2	12	junction_2	85.478418328839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769949	115785217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115770258_115775774_115775826_115778142_115778263_115781426_115781552_115781633_115781759_115783691
Isoform_58700_12	chr5	+	2133	11	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-7	407	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.3971770980332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8474	False	NA	NA	False	ATTAAA	-30	NA	115983329	116064175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_58702_5	chr5	+	1951	9	NIC	ENSMUSG00000029516.20	novel	1671	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	12.2212673238089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	8481	False	NA	NA	False	NA	NA	NA	115983336	116025661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712
Isoform_58703_14	chr5	+	2068	11	NIC	ENSMUSG00000029516.20	novel	1671	11	NA	NA	-5	407	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	11.3507708989302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8476	False	NA	NA	False	ATTAAA	-30	NA	115983331	116064175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_58705_6	chr5	+	2080	11	FSM	ENSMUSG00000029516.20	ENSMUST00000147330.8	1671	11	5	-414	2	407	multi-exon	FALSE	canonical	3	12	junction_1	12.568213874692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8486	False	NA	NA	False	ATTAAA	-30	NA	115983341	116064175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_58706_3	chr5	+	2059	11	NNC	ENSMUSG00000029516.20	novel	1671	11	NA	NA	19	405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9412181564958	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	8503	False	NA	NA	False	ATTAAA	-28	NA	115983358	116064173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_115983381_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
Isoform_58707_4	chr5	+	504	2	ISM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	2	22343	2	-22343	5prime_fragment	FALSE	canonical	3	389	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGAAATAAAAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	116576780	116577814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_116576898_116577427
Isoform_58708_6	chr5	+	3081	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	3	276	3	-276	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTAGTTGTCTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	116576781	116603270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
Isoform_58709_56	chr5	+	452	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	2908	0	481	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	11	True	NA	NA	NA	116576778	116600638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
Isoform_58710_3	chr5	+	3256	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	-165	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGGGCTAAATGATTG	NA	False	NA	NA	False	NA	NA	NA	116576778	116603381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_58711_5	chr5	+	3153	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	-6	-274	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGTCTTGTGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	116576772	116603272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_58712_34	chr5	+	513	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	481	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGTTGTTGTTGTTTTG	NA	False	NA	11	True	NA	NA	NA	116576778	116600638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
Isoform_58714_70	chr5	+	3081	21	FSM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	27	1359	27	-9	multi-exon	TRUE	canonical	0	0	junction_10	2.74727137356323	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	1413	False	NA	12	True	ATTAAA	-18	NA	117258220	117411923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_58715_3	chr5	+	1298	9	NNC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	9	3937	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	2.54644359843292	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAG	1395	False	NA	NA	False	NA	NA	NA	117258202	117345285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117344916
Isoform_58716_12	chr5	+	2996	20	NIC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	27	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.94266542073566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	1413	False	NA	12	True	ATTAAA	-18	NA	117258220	117411923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_117258405_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_58717_14	chr5	+	3096	21	NIC	ENSMUSG00000061288.14	novel	2172	8	NA	NA	4	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.87402157263998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAAAGA	7562	False	NA	12	True	ATTAAA	-18	NA	117264369	117411923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_117264569_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
Isoform_58718_15	chr5	+	4014	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	215	7	6	1	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457362	117493063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_58721_7	chr5	+	4090	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	139	7	-70	1	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457286	117493063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_58722_3	chr5	+	4242	10	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.94151090610254	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACATTTCTATGG	NA	False	NA	-4	True	AATAAA	-12	NA	117457133	117493063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476272_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
Isoform_58729_351	chr5	+	2354	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	43	24	42	-24	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495411	117516642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
Isoform_58736_16	chr5	+	2734	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82457	-2245	30396	1790	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACGA	NA	False	NA	NA	False	NA	NA	NA	118087635	118094219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_118087894_118090829_118090949_118091862
Isoform_58737_9	chr5	+	2727	3	NNC	ENSMUSG00000029361.19	novel	4388	28	NA	NA	30406	1790	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACGA	NA	False	NA	NA	False	NA	NA	NA	118087645	118094219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_118087894_118090829_118090949_118091859
Isoform_58740_117	chr5	+	2409	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	40	1510	-4	129	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114834	118146756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
Isoform_58742_43	chr5	+	3914	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	40	5	-4	-4	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCCAGTGACCTGCC	NA	False	NA	6	True	AATAAA	-17	NA	118114834	118148261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
Isoform_58745_332	chr5	+	2381	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-7	1509	3	129	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114841	118146756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
Isoform_58746_95	chr5	+	3886	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-7	4	3	-4	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCCAGTGACCTGCC	NA	False	NA	6	True	AATAAA	-17	NA	118114841	118148261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
Isoform_58747_11	chr5	+	2430	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-60	1513	-6	125	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATTCCCTTTTTTTGTTG	NA	False	NA	24	True	AATACA	-16	NA	118114788	118146752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
Isoform_58749_10	chr5	+	989	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	43	-1	21	1	multi-exon	FALSE	canonical	3	55	junction_1	14.2499552451857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATCTGTCCCTCACATC	NA	False	NA	18	True	AATAAA	-23	NA	118165850	118199944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
Isoform_58750_6	chr5	+	973	8	FSM	ENSMUSG00000029359.14	ENSMUST00000124648.8	981	8	34	-26	34	1	multi-exon	FALSE	canonical	3	17	junction_5	26.954231805876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCATCCCCATCTGTCC	NA	False	NA	10	True	AATAAA	-15	NA	118165863	118199936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
Isoform_58751_8	chr5	+	903	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4342	False	NA	9	True	AATAAA	-14	NA	118174069	118199935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
Isoform_58752_16	chr5	+	2641	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	27	2981	27	-2981	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1666	False	NA	7	True	NA	NA	NA	118383318	118401177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
Isoform_58755_71	chr5	+	1057	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	17	4575	17	-4575	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTCTCATTTCCTGA	1656	False	NA	5	True	AATACA	-14	NA	118383308	118399583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
Isoform_58757_30	chr5	+	3983	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-21	-556	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119809061	119822070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58759_23	chr5	+	4519	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	119809082	119822627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58763_26	chr5	+	3902	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	156	719	0	-556	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119809082	119822070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58768_91	chr5	+	4851	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	0	5	0	-5	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTTGAAGTTGTGG	NA	False	NA	17	True	AATAAA	-11	NA	119809082	119822784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58769_260	chr5	+	4139	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	0	717	0	-554	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTATGTAATTATTT	NA	False	NA	23	True	AATAAA	-23	NA	119809082	119822072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58783_86	chr5	+	4791	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	349	-158	0	-5	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTTGAAGTTGTGG	NA	False	NA	17	True	AATAAA	-11	NA	119809082	119822784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58785_241	chr5	+	4077	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	349	556	0	-556	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTATTTATGTAATTAT	NA	False	NA	21	True	AATAAA	-21	NA	119809082	119822070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
Isoform_58792_21	chr5	+	2105	3	NIC	ENSMUSG00000018604.19	novel	485	2	NA	NA	-14	-558	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	538	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGTATTTATGTAATT	NA	False	NA	19	True	AATAAA	-19	NA	119818299	119822068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_119818361_119818459_119819131_119820695
Isoform_58796_162	chr5	+	2157	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9268	717	37	-554	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTATGTAATTATTT	NA	False	NA	23	True	AATAAA	-23	NA	119818350	119822072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_119819131_119820695
Isoform_58797_134	chr5	+	2745	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9252	145	21	18	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	119818334	119822644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_119819131_119820695
Isoform_58799_45	chr5	+	2869	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9268	5	37	-5	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTTGAAGTTGTGG	NA	False	NA	17	True	AATAAA	-11	NA	119818350	119822784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_119819131_119820695
Isoform_58812_138	chr5	+	3988	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	22	0	22	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254551	120337046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
Isoform_58813_3	chr5	+	4490	25	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	-21	551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	24.9732843365777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120254560	120337597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946_120337499_120337538
Isoform_58814_100	chr5	+	2885	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	12	1	12	-1	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	8	True	NA	5	True	AATAAA	-21	NA	120649244	120672088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
Isoform_58816_11	chr5	+	2733	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	-69	-3	15	-1	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	11	True	NA	5	True	AATAAA	-21	NA	120649247	120672088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
Isoform_58817_125	chr5	+	2553	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	12	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	8	True	NA	6	True	AATAAA	-22	NA	120649244	120672089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
Isoform_58819_8	chr5	+	2396	11	NIC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	23	3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	71.8476861144463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTCCCACAGGGTCTC	19	True	NA	9	True	AATAAA	-25	NA	120649255	120672092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120670924
Isoform_58828_955	chr5	+	2977	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	382	963	-6	2	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGTGTGGCTTCCTCA	NA	False	NA	29	True	AATAAA	-20	NA	120751185	120765694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
Isoform_58829_13	chr5	+	3941	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	378	3	-10	-3	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAAGGTATTCCTCCT	NA	False	NA	13	True	GATAAA	-23	NA	120751181	120766654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
Isoform_58833_3	chr5	+	2636	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	42	7170	42	-6879	5prime_fragment	FALSE	canonical	3	12	junction_7	6.94291593155592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120787294	120810492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605
Isoform_58835_9	chr5	+	3245	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	6	0	6	0	multi-exon	TRUE	canonical	3	12	junction_7	7.30479294709987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120787258	120817662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_58837_10	chr5	+	2465	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	12990	0	8811	0	3prime_fragment	FALSE	canonical	3	12	junction_1	6.35393177328745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120800242	120817662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_58838_4	chr5	+	2390	14	NIC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8797	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.73949073029156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCGTGACGTGTTAAAA	NA	False	NA	8	True	TATAAA	-18	NA	120800228	120817659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_120800381_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_58843_2560	chr5	+	943	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	53	274	-12	1	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	2560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342596	121347030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
Isoform_58844_70	chr5	+	986	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	10	274	10	1	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342553	121347030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
Isoform_58858_43	chr5	+	3122	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	59	2266	0	212	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGACCCTCATCTGGGT	NA	False	NA	33	True	ATTAAA	-38	NA	121536057	121578206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
Isoform_58863_5	chr5	+	1334	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	57	-25	57	-2	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCGTCATTTGCAAGC	NA	False	NA	NA	False	AATAAA	-16	NA	121601271	121633482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
Isoform_58864_51	chr5	+	3729	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	5	10	5	1	multi-exon	TRUE	canonical	3	111	junction_6	24.4408545656822	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTACGTTTGAGTCTG	912	False	NA	10	True	AATAAA	-20	NA	121798630	121825309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
Isoform_58867_66	chr5	+	2369	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	2	-3	2	3	multi-exon	FALSE	canonical	3	24	junction_1	9.62635271879577	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGGGTGTATTATTG	5426	False	NA	2	True	AATAAA	-13	NA	121987059	121992665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
Isoform_58868_8	chr5	+	2313	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	-8	30	-8	3	multi-exon	FALSE	canonical	2	8	junction_1	19.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGGGTGTATTATTG	5405	False	NA	2	True	AATAAA	-13	NA	121987038	121992665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_121987188_121989230_121989343_121990613
Isoform_58870_9	chr5	+	655	7	FSM	ENSMUSG00000013936.13	ENSMUST00000014080.13	662	7	6	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_3	1.91485421551268	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGACCATTGGCTCA	3611	False	NA	NA	False	AATAAA	-20	NA	122239019	122244916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122239093_122239811_122239902_122240758_122240835_122241893_122241999_122242889_122242969_122243050_122243100_122244733
Isoform_58874_905	chr5	+	2319	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	60	5	-18	-1	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296400	122313331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
Isoform_58876_95	chr5	+	2429	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	-50	5	-50	-1	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296290	122313331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
Isoform_58878_148	chr5	+	1835	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	17	532	17	66	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTGATTCCTTCCTA	NA	False	NA	NA	False	ATTAAA	-14	NA	122296357	122312804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
Isoform_58887_91	chr5	+	1498	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	-61	5	17	-1	multi-exon	FALSE	canonical	3	517	junction_7	836.265410461711	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTCGTGTCTTTCTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	122296357	122313331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
Isoform_58888_35	chr5	+	2545	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-56	3	22	1	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTTCGTGTCTTTCT	NA	False	NA	-4	True	ATTAAA	-12	NA	122296362	122313329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
Isoform_58896_41	chr5	+	2931	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-5	-24	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122344861	122380336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_58897_6	chr5	+	2723	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-52	-279	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAATTATCATGAACT	NA	False	NA	NA	False	AATAAA	-30	NA	122344814	122380081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_58900_50	chr5	+	2612	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	154	24	-26	-24	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122347945	122380336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_58901_6	chr5	+	2830	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	-40	0	-40	0	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGGCTCCTTTTTGTT	NA	False	NA	28	True	AATAAA	-39	NA	122347751	122380360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
Isoform_58904_13	chr5	+	4263	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	17	364	17	-364	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	TTTAAA	-17	NA	122422444	122461980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
Isoform_58906_140	chr5	+	993	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	24	-3	0	3	multi-exon	FALSE	canonical	3	527	junction_1	833.067074130289	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGAAAACCTGTGTT	719	False	NA	20	True	AATAAA	-20	NA	122492471	122501352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
Isoform_58910_15	chr5	+	2685	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	31	0	-6	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	710	False	NA	11	True	AATAAA	-24	NA	122492462	122503047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
Isoform_58912_354	chr5	+	966	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	53	1697	0	1	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	732	False	NA	18	True	AATAAA	-18	NA	122492484	122501350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
Isoform_58919_6	chr5	+	1572	7	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	101	3	25	-3	intron_retention	FALSE	canonical	3	424	junction_4	38.3608596821755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTGAGGTTTGT	8140	False	NA	NA	False	AATAAA	-39	NA	122510614	122520962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
Isoform_5892_3755	chr11	-	2380	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-67	0	-67	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	3755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8463	False	NA	-5	True	AATAAA	-17	NA	69572739	69563940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_58921_104	chr5	+	1482	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	104	6	28	-6	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTTTGAGGTT	8143	False	NA	NA	False	AATAAA	-36	NA	122510617	122520959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_58923_74	chr5	+	1516	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	73	3	-3	-3	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTGAGGTTTGT	8112	False	NA	NA	False	AATAAA	-39	NA	122510586	122520962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_58926_9	chr5	+	1588	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	-4	8	-4	-8	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAACTGTGTTTGAGG	8035	False	NA	NA	False	AATAAA	-34	NA	122510509	122520957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
Isoform_5893_189	chr11	-	2467	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-154	0	84	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8376	False	NA	-5	True	AATAAA	-17	NA	69572826	69563940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_58930_497	chr5	+	850	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	40	9	-4	-9	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTACACACACTGTA	4528	False	NA	29	True	AATAAA	-44	NA	122529980	122544233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
Isoform_58932_3	chr5	+	1129	7	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-14	5105	-14	-2156	5prime_fragment	FALSE	canonical	3	232	junction_6	26.8416136292553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGCTTATGTTTGTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	122560529	122576392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191
Isoform_58933_3	chr5	+	1959	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	8	1632	8	-1	multi-exon	FALSE	canonical	3	226	junction_7	31.1071426040332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTTTTACCTGTCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	122560551	122579865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
Isoform_58934_190	chr5	+	2265	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	26	460	-11	-460	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGAGACTCTTCCT	NA	False	NA	28	True	AATAAA	-24	NA	122560532	122582515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
Isoform_58935_3	chr5	+	2055	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	12	-459	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	88.9181896151988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTGAGACTCTTCCTT	NA	False	NA	29	True	AATAAA	-25	NA	122560518	122582516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122579352_122579504_122581866
Isoform_58936_6	chr5	+	4888	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	41	7	13	-2	multi-exon	TRUE	canonical	3	11	junction_11	5.09015935135848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATTTAAGAATTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	122782014	122822345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
Isoform_58937_4	chr5	+	4782	14	NNC	ENSMUSG00000029468.18	novel	4936	13	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	7.0551504540296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAAGAATTCTCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	122782104	122822349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869_122820462_122820481
Isoform_58938_5	chr5	+	2671	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	32	-1	-4	1	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGGCTGTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	122845638	122867802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
Isoform_58939_57	chr5	+	1979	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	26	697	0	-3	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCCTTGTCTGTGCTG	NA	False	NA	12	True	ATTAAA	-17	NA	122845632	122867104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
Isoform_58940_39	chr5	+	1981	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	113	2346	4	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	627	False	NA	9	True	AATAAA	-16	NA	122988223	123007008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_58941_169	chr5	+	1935	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	159	2346	50	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	673	False	NA	9	True	AATAAA	-16	NA	122988269	123007008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_58942_5	chr5	+	3197	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	125	1118	16	-1118	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTATAAATTTGTTTTG	639	False	NA	NA	False	ATTAAA	-12	NA	122988235	123008236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_58944_8	chr5	+	1784	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	-18	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	605	False	NA	9	True	AATAAA	-16	NA	122988201	123007008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
Isoform_58946_75	chr5	+	1642	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-57	290	-57	10	multi-exon	FALSE	canonical	3	186	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTCATGTCTGTGT	4817	False	NA	6	True	NA	NA	NA	123153079	123168229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123153630_123167137
Isoform_58947_6	chr5	+	1930	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-40	-15	-40	15	multi-exon	FALSE	canonical	3	186	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGGAGGTAGTTACA	4834	False	NA	NA	False	ATTAAA	-17	NA	123153096	123168534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123153630_123167137
Isoform_58948_16	chr5	+	2576	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	45	-457	-5	457	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGCAGCCGGCCACA	NA	False	NA	NA	False	NA	NA	NA	123214382	123256269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_58949_31	chr5	+	1717	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	28	419	-22	321	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTCTCTTGCC	NA	False	NA	27	True	NA	NA	NA	123214365	123255393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_58950_8	chr5	+	2615	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	6	-457	6	457	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGCAGCCGGCCACA	NA	False	NA	NA	False	NA	NA	NA	123214343	123256269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_58951_19	chr5	+	1741	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	6	417	6	323	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTCTCTTGCCTT	NA	False	NA	29	True	NA	NA	NA	123214343	123255395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
Isoform_58952_3	chr5	+	2216	3	ISM	ENSMUSG00000029440.16	ENSMUST00000133386.2	2634	5	79	3790	11	1893	5prime_fragment	FALSE	canonical	3	158	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366331	123379541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_123366508_123372656_123372760_123377604
Isoform_58954_67	chr5	+	1366	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	62	1169	-6	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366314	123387025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
Isoform_58956_7	chr5	+	1271	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-14	435	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366306	123387025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
Isoform_58958_41	chr5	+	3764	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	42	912	-10	-2	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGGTGGCTGAGCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	123482552	123512143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
Isoform_58962_3	chr5	+	1557	2	FSM	ENSMUSG00000029414.12	ENSMUST00000199838.2	347	2	5	-1215	5	1215	multi-exon	FALSE	canonical	3	399	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	123887783	123893338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123887888_123891885
Isoform_58963_9	chr5	+	3224	2	FSM	ENSMUSG00000023106.16	ENSMUST00000171639.2	474	2	-20	-2730	-7	-18	multi-exon	FALSE	canonical	3	1559	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGAAACAAAACCAA	9065	False	NA	NA	False	NA	NA	NA	124045324	124049281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124045430_124046162
Isoform_58968_28	chr5	+	2207	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	101	31	1	-31	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAGAGTGAAGT	9079	False	NA	NA	False	NA	NA	NA	124045338	124066867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_58969_207	chr5	+	1000	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	100	1239	0	463	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTCTCTTTTTT	9078	False	NA	15	True	AATAAA	-24	NA	124045337	124065659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_5897_164	chr11	-	2216	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	9	-6	9	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8301	False	NA	-5	True	AATAAA	-17	NA	69572901	69563940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
Isoform_58971_6	chr5	+	1081	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	18	1240	18	462	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTTCTCTTTTT	8996	False	NA	14	True	AATAAA	-23	NA	124045255	124065658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
Isoform_58974_17	chr5	+	4344	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	33	2358	33	1512	multi-exon	TRUE	canonical	3	34	junction_6	6.64046185222248	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCCCTAGTGAGGGCC	NA	False	NA	3	True	AATAAA	-17	NA	124111723	124141263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
Isoform_58976_20	chr5	+	1568	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	27	1	-1	-1	multi-exon	FALSE	canonical	3	59	junction_5	17.423642940939	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	11	True	TATAAA	-16	NA	124250386	124253545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
Isoform_58977_21	chr5	+	1163	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	24	409	0	-11	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACACGCAGACTTTTG	NA	False	NA	14	True	AATAAA	-29	NA	124250383	124253137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
Isoform_58978_3	chr5	+	1081	7	FSM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	3	390	-1	1	multi-exon	FALSE	canonical	2	14	junction_5	31.3421973277773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTGGGTCATTCTTTG	NA	False	NA	26	True	AATAAA	-41	NA	124250386	124253149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252541_124252709_124252777
Isoform_58979_26	chr5	+	1024	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254140	124256259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
Isoform_58981_4	chr5	+	1802	2	ISM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-7	0	3	0	intron_retention	FALSE	canonical	3	507	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254154	124256259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124254675_124254977
Isoform_58982_4	chr5	+	1275	4	ISM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	2	0	2	0	intron_retention	FALSE	canonical	3	507	junction_1	53.5806764504601	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254163	124256259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892
Isoform_58983_201	chr5	+	1190	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	2	0	2	0	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254163	124256259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
Isoform_58988_23	chr5	+	1600	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	72	5	72	-5	multi-exon	FALSE	canonical	3	74	junction_1	7.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCATCGAGGAAGC	5470	False	NA	12	True	NA	NA	NA	124466232	124479902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124466293_124476689_124476999_124478671
Isoform_58990_3	chr5	+	1704	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	-32	5	-23	-5	multi-exon	FALSE	canonical	3	74	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCATCGAGGAAGC	5366	False	NA	12	True	NA	NA	NA	124466128	124479902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124466293_124476689_124476999_124478671
Isoform_58991_19	chr5	+	2693	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	38	8	1	-8	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACCTATGTGTTGT	NA	False	NA	21	True	AATAAA	-30	NA	124578030	124600363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_58997_12	chr5	+	2773	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-40	6	-40	-6	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTATGTGTTGTTG	NA	False	NA	23	True	AATAAA	-32	NA	124577952	124600365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_59_46	ERCC-00071	+	624	1	FSM	ERCC-00071A	DQ883654	626	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00071_+_0_600
Isoform_590_3	SIRV8002	+	4364	1	FSM	SIRV8002A	SIRV8002	8000	1	3636	0	3636	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	3636	8000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_3600_8000
Isoform_59000_6	chr5	+	2577	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	9	-797	9	0	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	NA	False	NA	29	True	AATAAA	-38	NA	124578038	124600371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_59006_6	chr5	+	2860	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	257	-765	-22	0	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4665	False	NA	29	True	AATAAA	-38	NA	124583824	124600371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
Isoform_59007_25	chr5	+	1072	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	43	0	-25	0	multi-exon	FALSE	canonical	3	127	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2263	False	NA	10	True	AATAAA	-24	NA	124621239	124629187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124621310_124628185
Isoform_59008_1365	chr5	+	1987	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	78	9	78	1	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTATTTTGTGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	124678835	124688560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
Isoform_59015_9	chr5	+	1043	2	ISM	ENSMUSG00000029389.18	ENSMUST00000136067.8	445	4	-16	5303	11	-1665	5prime_fragment	FALSE	canonical	3	111	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	124690942	124693488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124691103_124692605
Isoform_59016_11	chr5	+	958	3	ISM	ENSMUSG00000029389.18	ENSMUST00000144433.2	477	5	-72	5361	-10	-1667	5prime_fragment	FALSE	canonical	3	110	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAATAAAATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	124690948	124693486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124691103_124692605_124692657_124692733
Isoform_59020_5	chr5	+	2052	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	58	689	8	-689	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTAATTCCT	NA	False	NA	0	True	NA	NA	NA	124690984	124707034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
Isoform_59021_4	chr5	+	2110	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	2	687	2	-687	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690928	124707036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
Isoform_59022_340	chr5	+	1813	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	23	836	-3	257	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCTTAGAGTGTTTTT	NA	False	NA	22	True	AATAAA	-23	NA	124717225	124734907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_59025_5	chr5	+	1926	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	10	254	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	210.460655467952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTCCTTAGAGTGTT	NA	False	NA	19	True	AATAAA	-20	NA	124717214	124734904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727328_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_59026_9	chr5	+	1892	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	4	254	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	271.182486212518	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTCCTTAGAGTGTT	NA	False	NA	19	True	AATAAA	-20	NA	124717232	124734904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_124717265_124720510_124720591_124721585_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
Isoform_59028_22	chr5	+	2411	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	40	284	2	-284	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCCTAGTGTTAAGTG	NA	False	NA	30	True	AATAAA	-20	NA	124736851	124765519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
Isoform_59029_5	chr5	+	2698	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	41	-4	-2	4	multi-exon	FALSE	canonical	3	31	junction_8	6.97499240366195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGGTGATGGTGATG	NA	False	NA	NA	False	ATTAAA	-20	NA	124736852	124765807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
Isoform_59030_3	chr5	+	3042	14	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	22	9005	9	-2442	5prime_fragment	FALSE	canonical	3	147	junction_7	16.1929928596131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	124767138	124792514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177
Isoform_59031_72	chr5	+	2921	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	15	2409	2	-93	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAAGTTATTTTTTA	NA	False	NA	NA	False	AATATA	-16	NA	124767131	124799110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
Isoform_59033_32	chr5	+	3523	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	15	1807	2	509	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTCAGGTTAGCTGAA	NA	False	NA	29	True	AATAAA	-27	NA	124767131	124799712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
Isoform_59034_23	chr5	+	5323	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	15	7	2	-7	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTCTAGTTTTC	NA	False	NA	3	True	AATAAA	-14	NA	124767131	124801512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
Isoform_59036_4	chr5	+	5319	20	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	4	-7	intron_retention	FALSE	canonical	1	3	junction_9	41.2109632295183	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTCTAGTTTTC	NA	False	NA	3	True	AATAAA	-14	NA	124767133	124801512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789274_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
Isoform_5904_49	chr11	-	2491	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-62	0	intron_retention	FALSE	canonical	3	762	junction_9	86.3109509095664	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8468	False	NA	-5	True	AATAAA	-17	NA	69572734	69563940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
Isoform_59040_80	chr5	+	4059	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	33	0	33	0	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	8	True	NA	NA	NA	124939787	124965694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
Isoform_59044_3	chr5	+	1058	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-180	-133	2	133	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCACGCCTGGTATT	NA	False	NA	2	True	AATAAA	-8	NA	125518633	125531923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
Isoform_59045_5	chr5	+	1219	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-106	-368	76	368	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGCTTTGAAGGGAAC	NA	False	NA	28	True	AATAAA	-20	NA	125518707	125532158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
Isoform_59046_11	chr5	+	3383	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	16	3074	16	2570	multi-exon	FALSE	canonical	3	373	junction_1	23.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	125518647	125534360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125518957_125528733_125528837_125531389
Isoform_59047_164	chr5	+	1188	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	15	5270	15	374	multi-exon	FALSE	canonical	3	373	junction_1	23.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGGGAACGCTTGA	NA	False	NA	34	True	AATAAA	-26	NA	125518646	125532164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125518957_125528733_125528837_125531389
Isoform_59050_186	chr5	+	3175	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	59	5	59	-5	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	5	True	AATAAA	-22	NA	125552936	125594469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_59051_107	chr5	+	3227	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	16	-4	16	4	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCGTGTGTTTCTCTGAG	NA	False	NA	14	True	AATAAA	-31	NA	125552893	125594478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_59056_4	chr5	+	3847	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	-25	1312	-25	-5	multi-exon	TRUE	canonical	0	0	junction_2	1.8328597873269	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGTCGGTTTATATT	NA	False	NA	NA	False	AATAAA	-12	NA	127318846	127641545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
Isoform_59059_5	chr5	+	2801	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-18	630	-18	-630	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATATATATCTATTTTTT	8683	False	NA	10	True	AATAAA	-15	NA	127709307	127785808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_59060_4	chr5	+	1541	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-48	1920	-48	-1920	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGCTGGCAGCATTT	8653	False	NA	NA	False	AAAAAG	-17	NA	127709277	127784518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
Isoform_59061_3	chr5	+	743	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-5	-22131	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	12.7986544431653	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	8696	False	NA	NA	False	NA	NA	NA	127709320	127744804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
Isoform_59062_359	chr5	+	2227	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	149	1	16	-1	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTGAGTCATCTCTAG	491	False	NA	20	True	AATATA	-22	NA	129097281	129101386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_59066_79	chr5	+	1175	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	43	1159	43	-1159	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGAATCATCCCTTG	385	False	NA	NA	False	AATAAA	-21	NA	129097175	129100228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_59073_82	chr5	+	1267	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	-3	1159	-3	-1159	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGAATCATCCCTTG	542	False	NA	NA	False	AATAAA	-21	NA	129097332	129100228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
Isoform_59090_10	chr5	+	3353	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	24.9767793394753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTGGGGCTCTCCT	NA	False	NA	11	True	AATAAA	-24	NA	129578308	129648443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_59091_12	chr5	+	3213	18	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.1410864614324	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129578292	129648441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646878_129647539_129647613_129648065
Isoform_59093_21	chr5	+	3440	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	22.5492602052145	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGGGGCTCTCCTTCT	NA	False	NA	14	True	AATAAA	-27	NA	129578308	129648446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_59094_27	chr5	+	3300	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	8	5	8	-2	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTGGGGCTCTCCT	NA	False	NA	11	True	AATAAA	-24	NA	129578292	129648443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
Isoform_59095_354	chr5	+	3520	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	12	2890	12	-2890	multi-exon	TRUE	canonical	3	158	junction_6	22.9879195327556	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTGACAGCTCAGTG	NA	False	NA	9	True	AATAAA	-15	NA	129661244	129685273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
Isoform_59097_41	chr5	+	809	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	22	1	7	-1	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTGGCAGCTTGATTT	782	False	NA	22	True	CATAAA	-11	NA	129792588	129795543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
Isoform_59098_3	chr5	+	1011	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	28	-207	-3	-4	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAATTGGCCTGTTTTG	788	False	NA	NA	False	NA	NA	NA	129792594	129795751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
Isoform_59099_5	chr5	+	904	4	FSM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	21	-82	7	-1	multi-exon	FALSE	canonical	3	33	junction_2	354.785381134379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTGGCAGCTTGATTT	782	False	NA	22	True	CATAAA	-11	NA	129792588	129795543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129792923_129793790_129793931_129794979
Isoform_591_4	SIRV8002	+	3887	1	FSM	SIRV8002A	SIRV8002	8000	1	4111	2	4111	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	4111	7998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_4100_8000
Isoform_5910_3	chr11	-	1568	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	-240	107	-240	-107	multi-exon	TRUE	canonical	3	19	junction_6	8.13941029804985	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTCTTTGGGGTTCA	5172	False	NA	NA	False	AATAAA	-7	NA	69586915	69577182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
Isoform_59100_10	chr5	+	942	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	782	False	NA	24	True	CATAAA	-13	NA	129792588	129795545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
Isoform_59101_4	chr5	+	761	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGGTTGCATCCTTTTT	754	False	NA	21	True	ATTAAA	-34	NA	129792560	129795336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
Isoform_59102_23	chr5	+	980	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	28	4053	7	23	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTATTGTGTGTGTGTC	782	False	NA	46	True	CATAAA	-35	NA	129792588	129795567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
Isoform_59104_4	chr5	+	983	4	FSM	ENSMUSG00000034211.15	ENSMUST00000154358.6	514	4	12	-481	3	20	multi-exon	FALSE	canonical	3	15	junction_2	362.116924026849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	778	False	NA	43	True	CATAAA	-32	NA	129792584	129795564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129792977_129793790_129793931_129794979
Isoform_59106_15	chr5	+	1791	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	18	373	-5	22	multi-exon	FALSE	canonical	3	460	junction_1	221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	786	False	NA	45	True	CATAAA	-34	NA	129792592	129795566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129792614_129792747_129793931_129794979
Isoform_59109_10	chr5	+	731	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	782	False	NA	24	True	CATAAA	-13	NA	129792588	129795545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129792614_129793790_129793931_129794979
Isoform_5911_3	chr11	-	2530	13	ISM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	0	9623	0	-1995	5prime_fragment	FALSE	canonical	3	248	junction_6	20.1114947784152	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAGCTAAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	69649463	69634445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
Isoform_59115_3	chr5	+	1985	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	51	76	13	1	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGTCTAATTTTTACA	7818	False	NA	13	True	AATAAA	-19	NA	129802177	129835315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
Isoform_5912_9	chr11	-	826	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10790	4	8667	-4	3prime_fragment	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTTTTGTCTATTT	9572	False	NA	-6	True	ATTAAA	-20	NA	69675979	69674865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69675588_69675875
Isoform_59122_1217	chr5	+	2162	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	405	21	405	-21	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAGCTACTGGATCAT	NA	False	NA	17	True	AATAAA	-9	NA	129864466	129875191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
Isoform_59123_971	chr5	+	2203	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	375	10	375	-10	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATCATTCACACTTGAA	NA	False	NA	28	True	AATAAA	-20	NA	129864436	129875202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
Isoform_5913_4	chr11	-	2161	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	-16	10	-16	-10	multi-exon	TRUE	canonical	2	3	junction_10	6.56429737291052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTAATCATTTTTGT	-13	True	NA	-12	True	ATTAAA	-14	NA	69686785	69674871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
Isoform_5914_37	chr11	-	1969	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-29	-7	-29	7	multi-exon	FALSE	canonical	3	73	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAAGTGTTTCCTTTGG	NA	False	NA	1	True	ATTAAA	-19	NA	69696479	69694421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69695757_69695845
Isoform_59141_4	chr5	+	1173	6	ISM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	21	5183	-4	-3931	5prime_fragment	FALSE	canonical	3	472	junction_3	14.4692777981487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129875847	129887708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080
Isoform_59142_309	chr5	+	1641	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	4	619	4	-1	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTATTTATTTATTA	NA	False	NA	15	True	AATAAA	-15	NA	129875830	129892272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
Isoform_59145_10	chr5	+	1471	8	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTATTTATTTATTATA	NA	False	NA	17	True	AATAAA	-17	NA	129875845	129892274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
Isoform_59146_34	chr5	+	2447	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	39	6	-6	-6	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCCTGTCTCAAAAA	6044	False	NA	NA	False	AATAAA	-11	NA	129924602	129932458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
Isoform_59147_16	chr5	+	2894	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-77	-2167	-59	0	multi-exon	FALSE	canonical	3	55	junction_1	420.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970890	130013587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129971069_130007359_130007470_130010981
Isoform_59148_3	chr5	+	4847	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-89	-4108	68	-5	multi-exon	FALSE	canonical	3	55	junction_1	420.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATATTGTGCTGCCATC	NA	False	NA	8	True	AATAAA	-15	NA	129970878	130015528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129971069_130007359_130007470_130010981
Isoform_5915_3	chr11	-	3439	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-36	-1470	-36	1470	multi-exon	FALSE	canonical	3	73	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAGAAAACAGA	NA	False	NA	NA	False	AAGAAA	-31	NA	69696486	69692958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69695757_69695845
Isoform_59150_3	chr5	+	2776	2	NIC	ENSMUSG00000066735.9	novel	650	3	NA	NA	-54	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTTGTGTTTTATT	NA	False	NA	41	True	AATATA	-14	NA	129970895	130013584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_129971069_130010981
Isoform_59151_19	chr5	+	4957	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	101	-1946	-38	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970911	130015533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_59152_115	chr5	+	3024	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	88	0	-51	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970898	130013587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129971207_130007359_130007470_130010981
Isoform_5916_21	chr11	-	1988	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-55	0	-55	0	multi-exon	FALSE	canonical	3	73	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAATGGAAAGTGTTT	NA	False	NA	-6	True	ATTAAA	-12	NA	69696505	69694428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69695757_69695845
Isoform_59160_10	chr5	+	2895	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-32	1946	-32	0	multi-exon	FALSE	canonical	3	56	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970917	130013587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129971207_130010981
Isoform_59161_185	chr5	+	1440	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	45	7	7	-7	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGCATGTGCCACCA	NA	False	NA	-2	True	NA	NA	NA	130058175	130089623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
Isoform_59164_23	chr5	+	1391	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	-3	-457	-3	3	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACCATACCTGGTAT	NA	False	NA	8	True	AAAACA	-4	NA	130058139	130089633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
Isoform_59166_4	chr5	+	1521	6	FSM	ENSMUSG00000025532.14	ENSMUST00000156729.2	669	6	-12	-840	3	-17	multi-exon	FALSE	canonical	3	25	junction_1	131.765549367048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACCAACAAAAAACAGCA	NA	False	NA	-12	True	NA	NA	NA	130058171	130089613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130058336_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
Isoform_59167_5	chr5	+	1449	5	NIC	ENSMUSG00000025532.14	novel	669	6	NA	NA	7	10	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	170.510080347175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATACCTGGTATGTTTGTG	NA	False	NA	15	True	AAAACA	-11	NA	130058175	130089640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_130058336_130063752_130063790_130066660_130066760_130077766_130077825_130088545
Isoform_59168_88	chr5	+	2023	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	27	0	27	0	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	False	NA	17	True	AATAAA	-18	NA	130108237	130164570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
Isoform_59170_12	chr5	+	3297	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	22	972	22	-972	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGATGTGGTTCCATGG	1877	False	NA	NA	False	AATAAA	-17	NA	130173723	130183675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
Isoform_59171_11	chr5	+	3576	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	22	693	22	-693	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTAGTTTGGCCTGTTTG	1877	False	NA	NA	False	AATAAA	-17	NA	130173723	130183954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
Isoform_59173_67	chr5	+	2642	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	18	-2	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200682	130243176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_59175_69	chr5	+	2642	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	40	8	14	-3	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGATTGGTTTTGTTT	NA	False	NA	13	True	AATAAA	-35	NA	130200678	130243175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_59179_3	chr5	+	2473	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-4	intron_retention	FALSE	canonical	1	2	junction_3	62.0388291840732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGATTGGTTTTGTT	NA	False	NA	12	True	AATAAA	-34	NA	130200679	130243174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
Isoform_5918_4	chr11	-	2781	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	0	-3	0	3	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACAGCCTCCTTCCTA	9080	False	NA	-3	True	AAAAAG	-30	NA	69749556	69741827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
Isoform_59181_484	chr5	+	3569	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	1	0	-1	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGCCGTTTTAATT	9017	False	NA	13	True	AATAAA	-14	NA	130251175	130272506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
Isoform_59187_64	chr5	+	2505	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	1	-406	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	3513	False	NA	20	True	AATAAA	-23	NA	130284460	130369998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_5919_4	chr11	-	2232	20	ISM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	4492	2	-556	-2	3prime_fragment	FALSE	canonical	3	29	junction_17	7.4342920349514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTTTCTTAGTTCATT	NA	False	NA	-8	True	ATTAAA	-13	NA	69781873	69772394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689
Isoform_59192_460	chr5	+	2613	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	25	406	25	-406	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4953	False	NA	20	True	AATAAA	-23	NA	130285900	130369998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_59193_18	chr5	+	3034	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	12	-2	12	2	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTTCCCATGCTTGT	4940	False	NA	NA	False	AATAAA	-19	NA	130285887	130370406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_59196_60	chr5	+	2624	16	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	12	-406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.2724135847746	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4940	False	NA	20	True	AATAAA	-23	NA	130285887	130369998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306775_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
Isoform_5920_42	chr11	-	2482	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	-1	1	-1	-1	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTAGTTCATTT	9572	False	NA	-7	True	ATTAAA	-14	NA	69786366	69772393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
Isoform_59200_8	chr5	+	4777	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	4	2586	4	-2573	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134128553	134170596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
Isoform_59201_8	chr5	+	3276	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	3	4088	3	2709	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATTCTGTAAATAGCA	NA	False	NA	NA	False	TATAAA	-22	NA	134128552	134169094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
Isoform_59202_12	chr5	+	3474	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	2	6	2	-6	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTGTGTGTGTTTGTG	NA	False	NA	4	True	AATAAA	-11	NA	134212867	134246982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
Isoform_59204_22	chr5	+	1915	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	68	3012	1	465	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTGTTGTTTTTA	NA	False	NA	NA	False	TTTAAA	-22	NA	134611611	134627647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_59205_443	chr5	+	1441	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	77	3477	10	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611620	134627182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_59207_7	chr5	+	1577	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611611	134627181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
Isoform_59209_3	chr5	+	1940	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	-3	871	-3	43	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGGGGTGATCTGAT	3409	False	NA	NA	False	AATAAA	-12	NA	134961218	134970620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59210_35	chr5	+	1398	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	7	1403	2	2	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3419	False	NA	6	True	NA	NA	NA	134961228	134970088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59211_13	chr5	+	1198	7	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	36.2583323756991	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3419	False	NA	4	True	NA	NA	NA	134961228	134970086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
Isoform_59212_13	chr5	+	1262	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111219.8	1790	6	2	526	2	-5	multi-exon	FALSE	canonical	2	10	junction_1	38.8947297201048	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3419	False	NA	11	True	NA	NA	NA	134961228	134970051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59213_9	chr5	+	1389	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	-7	5	0	-5	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3429	False	NA	11	True	NA	NA	NA	134961238	134970051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59214_3	chr5	+	1419	6	FSM	ENSMUSG00000040557.15	ENSMUST00000201847.3	721	6	-127	-571	5	3	multi-exon	FALSE	canonical	3	6	junction_1	40.4791304254427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAATAAAAATACAA	3441	False	NA	19	True	NA	NA	NA	134961250	134970059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59216_15	chr5	+	1575	5	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3416	False	NA	11	True	NA	NA	NA	134961225	134970051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_59217_4	chr5	+	1377	6	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	24	junction_5	33.3610551391889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3416	False	NA	11	True	NA	NA	NA	134961225	134970051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
Isoform_59218_10	chr5	+	2195	4	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	4	-5	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3421	False	NA	11	True	NA	NA	NA	134961230	134970051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
Isoform_5922_3	chr11	-	1609	9	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.70087712549569	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGAGCTGCGTGTCC	9770	False	NA	-8	True	AATAAA	-20	NA	69791739	69788183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69788319_69788436_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
Isoform_59220_284	chr5	+	1112	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	375	6	-17	-1	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038527	135041023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
Isoform_59224_35	chr5	+	1254	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	218	1	-17	-1	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038527	135041023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
Isoform_59226_6	chr5	+	1088	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	12	-5	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGCCCTGGATCCGTTT	NA	False	NA	5	True	AATAAA	-12	NA	135038838	135041019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
Isoform_59227_5	chr5	+	1407	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGATCCGTTTTCAC	NA	False	NA	9	True	AATAAA	-16	NA	135038523	135041023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
Isoform_59228_3	chr5	+	1670	4	ISM	ENSMUSG00000007207.11	ENSMUST00000156626.8	2114	7	1544	-2	1338	1	3prime_fragment	FALSE	canonical	3	18	junction_1	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTCTGTTTGGAACAT	7220	False	NA	16	True	AATAAA	-16	NA	135071457	135079955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_135071521_135074450_135074589_135077764_135077959_135078680
Isoform_59229_3	chr5	+	3178	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-18	462	-2	-2	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAAGGGTTGGTGTTGG	3416	False	NA	-1	True	AATAAA	-12	NA	135135753	135166774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
Isoform_5923_3	chr11	-	1575	8	NIC	ENSMUSG00000018570.18	novel	2009	8	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905888	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGTGCTGGGAGCTGC	9770	False	NA	-14	True	AATAAA	-14	NA	69791739	69788189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790753_69791128
Isoform_59230_4	chr5	+	4517	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	-3	2844	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9516	False	NA	6	True	NA	NA	NA	135178536	135191519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_59231_113	chr5	+	4364	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	3095	0	2844	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9519	False	NA	6	True	NA	NA	NA	135178539	135191519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_59234_9	chr5	+	5585	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	15	1888	-14	-1888	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGACTCCCTGGTGGT	9505	False	NA	15	True	NA	NA	NA	135178525	135192726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
Isoform_59237_10	chr5	+	538	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	19	7	-4	-7	multi-exon	FALSE	canonical	3	101	junction_2	118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATCCTAAAGTGTCT	8794	False	NA	NA	False	NA	NA	NA	135197261	135202295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135197453_135199940_135200017_135202024
Isoform_59238_3	chr5	+	2776	5	ISM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	107	-883	1	883	intron_retention	FALSE	canonical	3	264	junction_3	29.2147223159831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAGAAAAAAGAAAGAAAG	8776	False	NA	NA	False	NA	NA	NA	135197243	135211592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369
Isoform_59239_103	chr5	+	1632	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	120	6	-9	-6	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTACTTGACAGCTTCTT	8789	False	NA	23	True	ATTAAA	-18	NA	135197256	135210703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
Isoform_59242_3	chr5	+	2555	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	86	-883	-20	883	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAGAAAAAAGAAAGAAAG	8755	False	NA	NA	False	NA	NA	NA	135197222	135211592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
Isoform_59254_8	chr5	+	6499	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-12	5	-12	-5	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGACAGCTTTGATG	NA	False	NA	36	True	AATAAA	-39	NA	135216105	135274978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
Isoform_59259_76	chr5	+	2242	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	3	-2	3	2	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTTAAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	135398809	135405654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_59260_547	chr5	+	1585	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	3	655	3	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398809	135404997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_59263_15	chr5	+	1703	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	113.163421652051	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGATCACAGTTTTA	NA	False	NA	16	True	AATAAA	-16	NA	135398812	135404995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_59264_13	chr5	+	1544	10	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	87.7620239027461	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398842	135404997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
Isoform_59265_36	chr5	+	2009	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	52	2302	2	-381	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661559	135673000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
Isoform_59267_4	chr5	+	4319	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	42	2	-8	-2	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAAAGGCATGG	NA	False	NA	NA	False	NA	NA	NA	135661549	135675300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
Isoform_59268_161	chr5	+	1907	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	72	2228	-14	-379	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	17	True	TATAAA	-21	NA	135661543	135673002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_59269_10	chr5	+	4208	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	72	-73	-14	1	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGCATGGCCT	NA	False	NA	NA	False	NA	NA	NA	135661543	135675303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_59270_30	chr5	+	2253	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	102	1852	-3	-3	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTCTTTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	135661573	135673378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
Isoform_59275_15	chr5	+	2555	16	NIC	ENSMUSG00000005514.15	novel	918	8	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	64.9938116712319	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	1582	False	NA	14	True	AATAAA	-14	NA	135698834	135764180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135698971_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
Isoform_59278_977	chr5	+	2475	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	161	0	39	0	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2062	False	NA	14	True	AATAAA	-14	NA	135718050	135764180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
Isoform_59279_17	chr5	+	2568	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	68	0	-54	0	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	1969	False	NA	14	True	AATAAA	-14	NA	135717957	135764180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
Isoform_59285_105	chr5	+	1311	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	144	1	-12	-1	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTGTAGATTTCCTT	597	False	NA	37	True	AGTAAA	-24	NA	135807477	135819244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
Isoform_59287_3810	chr5	+	1280	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	175	1	-7	-1	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	3810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTGTAGATTTCCTT	628	False	NA	37	True	AGTAAA	-24	NA	135807508	135819244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
Isoform_59298_981	chr5	+	815	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	83	5	-16	-3	multi-exon	FALSE	canonical	3	2181	junction_2	11	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGTCTGACTCCAGAGT	NA	False	NA	2	True	AATAAA	-20	NA	135916855	135918412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_59299_251	chr5	+	903	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	-3	3	-3	-1	multi-exon	FALSE	canonical	3	2181	junction_2	11	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTCTGACTCCAGAGTTA	NA	False	NA	4	True	AATAAA	-22	NA	135916769	135918414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_593_4	SIRV8002	+	3512	1	FSM	SIRV8002A	SIRV8002	8000	1	4488	0	4488	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	4488	8000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_4500_8000
Isoform_59300_34	chr5	+	929	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	-31	5	-31	-3	multi-exon	FALSE	canonical	3	2181	junction_2	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGTCTGACTCCAGAGT	NA	False	NA	2	True	AATAAA	-20	NA	135916741	135918412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135917289_135917902_135917967_135918094
Isoform_59302_7	chr5	+	1303	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	20	0	20	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	136008972	136017478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
Isoform_59303_66	chr5	+	2605	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	45	0	1	0	multi-exon	TRUE	canonical	3	47	junction_6	35.5758344947803	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGAAGTTTTGTGT	8504	False	NA	16	True	AATAAA	-21	NA	136023698	136061726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
Isoform_59304_186	chr5	+	2465	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	27	1	-6	-1	multi-exon	TRUE	canonical	3	84	junction_5	18.5279235376575	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCATCTGTTGGGAA	8497	False	NA	7	True	AATAAA	-12	NA	136023691	136061717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
Isoform_59311_6	chr5	+	2579	18	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	11	5829	11	-2	5prime_fragment	FALSE	canonical	3	36	junction_7	11.2922792621444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCATGTGTACGTGTGTG	2163	False	NA	NA	False	AATAAA	-16	NA	136112780	136134885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
Isoform_59312_103	chr5	+	2882	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	31	1	-7	-1	multi-exon	FALSE	canonical	3	36	junction_7	10.6273232754067	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGGTGTTGGGTTGG	2183	False	NA	NA	False	AATAAA	-19	NA	136112800	136140713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_59314_15	chr5	+	3119	20	FSM	ENSMUSG00000004952.14	ENSMUST00000135344.8	3057	20	-61	-1	-17	1	multi-exon	TRUE	canonical	3	36	junction_7	10.66669552166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	2173	False	NA	NA	False	AATAAA	-16	NA	136112790	136140710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_59315_3	chr5	+	2142	14	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	14704	1	3030	-1	3prime_fragment	FALSE	canonical	3	51	junction_3	8.16617355513244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGGTGTTGGGTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	136127473	136140713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
Isoform_59318_302	chr5	+	578	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	68	0	-3	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9280	False	NA	30	True	AATAAA	-19	NA	136145552	136151801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
Isoform_59319_79	chr5	+	1759	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	15	-1	11	1	multi-exon	FALSE	canonical	3	62	junction_2	0.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTTCTCCTTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	136165022	136170467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136165149_136168191_136168390_136169032
Isoform_59321_3	chr5	+	1809	3	FSM	ENSMUSG00000039754.11	ENSMUST00000143229.2	641	3	-61	-1107	-5	-2	multi-exon	FALSE	canonical	1	2	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATTTCTCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	136164994	136170464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136165149_136168191_136168415_136169032
Isoform_59322_22	chr5	+	1635	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	23	-1101	11	1	multi-exon	FALSE	canonical	3	9	junction_1	26.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTTCTCCTTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	136165022	136170467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136165149_136168315_136168390_136169032
Isoform_59323_14	chr5	+	1887	3	FSM	ENSMUSG00000039754.11	ENSMUST00000125923.2	1040	3	-12	-835	0	1	multi-exon	FALSE	canonical	2	7	junction_1	27.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTTCTCCTTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	136164999	136170467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136165254_136168191_136168390_136169032
Isoform_59324_37	chr5	+	903	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	8	2160	8	63	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTAGCACTGTGTTTTC	4063	False	NA	6	True	NA	NA	NA	136937011	136942098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
Isoform_59325_18	chr5	+	597	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	-6	26	-6	-26	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATGAA	NA	False	NA	NA	False	NA	NA	NA	136948199	136962513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
Isoform_59326_23	chr5	+	3764	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	206	-3	0	3	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTCGCTTTTTTGTT	NA	False	NA	27	True	AATAAA	-16	NA	136948205	136965963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
Isoform_59328_60	chr5	+	942	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	7	-1	7	1	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	4058	False	NA	19	True	AATAAA	-20	NA	136982135	136995087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_59329_4	chr5	+	1049	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	-100	-1	-100	1	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	3951	False	NA	19	True	AATAAA	-20	NA	136982028	136995087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_59332_13	chr5	+	815	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-130	-84	1	1	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	4052	False	NA	19	True	AATAAA	-20	NA	136982129	136995087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
Isoform_59333_164	chr5	+	756	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	29	1	29	1	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTGTGAGCGAGC	3297	False	NA	19	True	AATAAA	-20	NA	136990959	136995087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
Isoform_59336_166	chr5	+	2591	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	584	105	127	-105	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCGTGAGTCCAATAT	NA	False	NA	17	True	AATAAA	-18	NA	137016456	137025397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_59337_123	chr5	+	2890	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	280	110	-79	-110	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGAGTCCGTGAGTCC	NA	False	NA	12	True	AATAAA	-13	NA	137016152	137025392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_59339_23	chr5	+	2670	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	600	10	143	-10	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGCAAAATATTTATTTG	NA	False	NA	112	True	ATTAAA	-14	NA	137016472	137025492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_59340_9	chr5	+	3018	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	252	10	-107	-10	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGCAAAATATTTATTTG	NA	False	NA	112	True	ATTAAA	-14	NA	137016124	137025492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_59342_19	chr5	+	2940	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	230	110	-129	-110	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGAGTCCGTGAGTCC	NA	False	NA	12	True	AATAAA	-13	NA	137016102	137025392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
Isoform_59345_6	chr5	+	3149	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	20	-110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	44.6083436252418	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGAGTCCGTGAGTCC	NA	False	NA	12	True	AATAAA	-13	NA	137015892	137025392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023912_137024959
Isoform_59349_19	chr5	+	4360	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	-63	-1	0	1	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGGGTGACTGGGAG	NA	False	NA	20	True	AATAAA	-23	NA	137348370	137372783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_59351_6	chr5	+	3977	16	ISM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	0	1334	0	-1116	5prime_fragment	FALSE	canonical	3	265	junction_1	34.6933230848051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATGAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	137348370	137371456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646
Isoform_59353_150	chr5	+	4318	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	0	22	0	-14	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATATGTCTCAGTCCA	NA	False	NA	5	True	AATAAA	-8	NA	137348370	137372768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_59355_3	chr5	+	4401	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	-73	12	-73	-4	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCCAGAGGGTGACT	NA	False	NA	15	True	AATAAA	-18	NA	137348297	137372778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
Isoform_59358_16	chr5	+	4121	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	185	-1860	multi-exon	FALSE	canonical	0	0	junction_23	18.3778552102844	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGATAAAAA	NA	False	NA	45	True	NA	NA	NA	137508699	137524337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
Isoform_59359_9	chr5	+	4115	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	185	-1863	multi-exon	TRUE	canonical	0	0	junction_23	19.3589955849773	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAGATAA	NA	False	NA	42	True	NA	NA	NA	137508699	137524334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
Isoform_59360_4	chr5	+	2628	17	ISM	ENSMUSG00000029716.14	ENSMUST00000198783.5	2973	18	567	13	-79	-2	3prime_fragment	FALSE	canonical	1	1	junction_5	2.24913177693082	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCCATACGCAATT	5099	False	NA	NA	False	AATAAA	-13	NA	137569633	137585725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
Isoform_59361_72	chr5	+	3027	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	57	-6	0	1	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2241	False	NA	31	True	AATAAA	-33	NA	137627439	137639362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
Isoform_59363_22	chr5	+	3081	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	3	-6	3	1	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2187	False	NA	31	True	AATAAA	-33	NA	137627385	137639362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
Isoform_59364_25	chr5	+	2460	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	26	592	4	263	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTGTGCGTGTGTG	2210	False	NA	28	True	TATAAA	-16	NA	137627408	137638764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
Isoform_59365_4	chr5	+	4482	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	-20	2	-20	-2	multi-exon	FALSE	canonical	3	204	junction_21	33.9740463834439	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGCTGTCTGCAGTGG	2218	False	NA	21	True	AATAAA	-13	NA	137627416	137641159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_59366_10	chr5	+	1219	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	-123	5	-20	-2	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGCTGTCTGCAGTGG	1081	False	NA	21	True	AATAAA	-13	NA	137639575	137641159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
Isoform_59369_416	chr5	+	2146	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	177	1660	177	200	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGAGGTTGGTGTGCTG	NA	False	NA	12	True	ATTAAA	-23	NA	137744434	137758010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
Isoform_59371_278	chr5	+	2307	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	16	1660	16	200	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGAGGTTGGTGTGCTG	NA	False	NA	12	True	ATTAAA	-23	NA	137744273	137758010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
Isoform_59372_55	chr5	+	2590	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-270	1663	-4	197	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGGAGGTTGGTGTG	NA	False	NA	9	True	ATTAAA	-20	NA	137743987	137758007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
Isoform_59377_11	chr5	+	681	4	NIC	ENSMUSG00000029725.11	novel	430	3	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	179.735608294208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777111	137778367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_137777160_137777563_137777808_137777887_137778025_137778115
Isoform_59378_10	chr5	+	1110	2	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	12	5	12	-1	intron_retention	FALSE	canonical	3	301	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777177	137778367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_137777484_137777563
Isoform_59379_69	chr5	+	1031	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	11	5	11	-1	intron_retention	FALSE	canonical	3	301	junction_1	64	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777176	137778367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_137777484_137777563_137777808_137777887
Isoform_5938_268	chr11	-	1348	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	88	1	88	-1	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	6359	False	NA	-16	True	AATAAA	-19	NA	69812124	69807546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
Isoform_59380_556	chr5	+	925	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	26	5	26	-1	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777191	137778367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
Isoform_59381_10	chr5	+	1004	3	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	26	-2	intron_retention	FALSE	canonical	3	301	junction_1	46	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATTACCGAACTGTTC	NA	False	NA	-1	True	AATAAA	-12	NA	137777191	137778366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_137777484_137777563_137778025_137778115
Isoform_59382_11	chr5	+	1020	3	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	11	-1	intron_retention	FALSE	canonical	3	393	junction_2	18	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777176	137778367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_137777808_137777887_137778025_137778115
Isoform_59386_7	chr5	+	2217	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	5	0	5	0	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTTGTGTGTGTGT	7082	False	NA	32	True	AATAAA	-25	NA	137786064	137820883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
Isoform_59387_33	chr5	+	2221	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	32	-1	-2	0	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115196	138132476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
Isoform_59388_27	chr5	+	2153	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	-19	0	2	0	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115179	138132476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
Isoform_59389_78	chr5	+	2246	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	13	51	-8	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115190	138132476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
Isoform_59390_52	chr5	+	2160	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-7	51	-7	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115191	138132476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
Isoform_59392_1679	chr5	+	1092	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	30	665	1	3	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	1679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159362	138162243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
Isoform_59404_4	chr5	+	2239	2	ISM	ENSMUSG00000019518.12	ENSMUST00000157031.2	2148	3	-12	-1	-12	1	intron_retention	FALSE	canonical	3	71	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAAAATAACA	8110	False	NA	NA	False	NA	NA	NA	138170296	138172635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_138170511_138170610
Isoform_59405_14	chr5	+	3460	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	14	5	11	-5	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTATGGTGGTGCATTC	8091	False	NA	13	True	NA	NA	NA	138170277	138178686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
Isoform_59406_28	chr5	+	3359	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	117	3	51	-3	multi-exon	FALSE	canonical	3	48	junction_6	9.89356624586021	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGGTGGTGCATTCCT	8194	False	NA	15	True	NA	NA	NA	138170380	138178688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
Isoform_59412_12	chr5	+	1617	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-39	277	-39	-277	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGCTGAGTCCCATTTC	5559	False	NA	14	True	ATTAAA	-14	NA	138185707	138191903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_59413_14	chr5	+	1536	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	40	279	40	-279	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCTGAGTCCCATT	5638	False	NA	12	True	ATTAAA	-12	NA	138185786	138191901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_59414_12	chr5	+	1866	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-39	28	-39	-28	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAACAAAACAAGA	5559	False	NA	NA	False	NA	NA	NA	138185707	138192152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
Isoform_59415_175	chr5	+	565	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	301	11	-48	-11	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGCTCAGGATGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	138254044	138257646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
Isoform_59417_4	chr5	+	928	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	38	14	38	-11	multi-exon	FALSE	canonical	3	386	junction_1	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGCTCAGGATGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	138254130	138257646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138254596_138256916_138257035_138257301
Isoform_59419_3	chr5	+	932	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	17	-325	2	-4	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAGGACACAAGTTTA	6203	False	NA	NA	False	NA	NA	NA	138262332	138264919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138262364_138264018
Isoform_59420_3	chr5	+	710	3	FSM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	29	4	3	-4	multi-exon	FALSE	canonical	1	2	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAGGACACAAGTTTA	6204	False	NA	NA	False	NA	NA	NA	138262333	138264919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138262364_138264018_138264268_138264488
Isoform_59421_4	chr5	+	4325	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	-204	2	100	1	multi-exon	TRUE	canonical	1	2	junction_1	28.1737362148663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278601	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59422_5	chr5	+	4142	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	-21	2	-3	1	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278784	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59423_24	chr5	+	4199	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278763	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59424_3	chr5	+	4354	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	107	1	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278608	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59425_43	chr5	+	4191	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	18	2	0	1	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278805	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59426_3	chr5	+	4804	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	7	1	intron_retention	FALSE	canonical	2	26	junction_16	27.2873902138863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278777	138310653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
Isoform_59427_18	chr5	+	3261	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	19	2032	8	-2032	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAATGACGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	138439748	138456924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
Isoform_59430_4	chr5	+	2259	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-50	-1340	11	1340	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGCTTATGTTCCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	138439751	138455929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
Isoform_59431_45	chr5	+	3442	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	3	5	3	-5	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGGCCATCTGT	NA	False	NA	6	True	ATTAAA	-14	NA	139135980	139172260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
Isoform_59432_17	chr5	+	2153	6	FSM	ENSMUSG00000036817.15	ENSMUST00000142473.8	2168	6	1	14	1	-14	multi-exon	FALSE	canonical	3	597	junction_1	167.541039748475	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	139186422	139214080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460
Isoform_59433_55	chr5	+	4101	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	30	3	0	-3	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186421	139235592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59434_73	chr5	+	4053	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	30	51	0	-6	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186421	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59435_14	chr5	+	4081	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	2	51	2	-6	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186393	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59437_6	chr5	+	4130	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	3	1	3	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186394	139235594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59438_22	chr5	+	4099	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186421	139235593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59441_17	chr5	+	3992	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	7	-44	0	-1	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186421	139235594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59442_6	chr5	+	3996	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	-20	-21	3	21	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAGTGTGTATTTCTT	NA	False	NA	9	True	AATAAA	-42	NA	139186394	139235571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59443_22	chr5	+	3939	22	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	224	junction_8	233.254943100303	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186421	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59444_6	chr5	+	3925	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	227.455841868262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186421	139235593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59445_61	chr5	+	3861	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-13	-1240	0	-6	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186421	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59447_19	chr5	+	3858	22	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186421	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59448_9	chr5	+	3906	22	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186423	139235594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59449_11	chr5	+	3827	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186394	139235594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59451_9	chr5	+	3793	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	249.524768309681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186424	139235593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59453_46	chr5	+	3681	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	27	6	1	-6	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCATGTGCGATTTCA	NA	False	NA	14	True	AATAAA	-15	NA	139186424	139235544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59454_20	chr5	+	3677	20	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	241.404420387916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCATGTGCGATTT	NA	False	NA	12	True	AATAAA	-13	NA	139186423	139235542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59455_17	chr5	+	3635	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186421	139235594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59456_12	chr5	+	3630	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	252.672438368555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186421	139235592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
Isoform_59458_7	chr5	+	892	7	NNC	ENSMUSG00000036817.15	novel	1522	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	366.601509362232	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	139186421	139214097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213919
Isoform_59459_6	chr5	+	1338	7	NNC	ENSMUSG00000036817.15	novel	1522	7	NA	NA	0	448	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	366.601509362232	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTTTTGCCTGTAC	NA	False	NA	NA	False	AATAAA	-21	NA	139186421	139214543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213919
Isoform_59469_1385	chr5	+	1333	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	52	722	6	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238130	139255084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_5947_7986	chr11	-	1347	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	-5	1	-5	-1	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	7986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	9936	False	NA	-16	True	AATAAA	-19	NA	69812217	69807546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
Isoform_59470_340	chr5	+	2045	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	62	0	16	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238140	139255806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_59472_27	chr5	+	2105	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	0	2	0	-2	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCAGTAGTCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	139238078	139255804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_59473_125	chr5	+	1389	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-4	722	-4	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238074	139255084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_59476_28	chr5	+	2110	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	33	0	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238157	139255806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
Isoform_59482_83	chr5	+	1326	9	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_2	357.02973878236	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238134	139255084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_139238375_139248235_139248315_139248627_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
Isoform_59486_6	chr5	+	1487	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	77	2593	77	1059	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGACATGATACTTGA	1432	False	NA	NA	False	AATGAA	-32	NA	139366412	139379577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139366499_139378176
Isoform_59487_17	chr5	+	2844	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	0	5	0	-5	multi-exon	FALSE	canonical	3	22	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTCTGGTGTCTGGAT	NA	False	NA	11	True	AATAAA	-16	NA	139777267	139788403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_139777468_139784893_139784974_139785839
Isoform_59488_50	chr5	+	928	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	25	1	-20	-1	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGTGTGACTACAGC	NA	False	NA	9	True	NA	NA	NA	140317688	140323891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
Isoform_59491_13	chr5	+	875	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	76	1	-18	-1	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGTGTGACTACAGC	NA	False	NA	9	True	NA	NA	NA	140317690	140323891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
Isoform_59493_4	chr5	+	677	4	NNC	ENSMUSG00000036639.13	novel	952	4	NA	NA	9	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.5459811606532	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGGTCCTGTTTTAG	NA	False	NA	34	True	NA	NA	NA	140317672	140323677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_140317711_140320209_140320375_140321069_140321214_140323347
Isoform_59497_896	chr5	+	2968	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-23	0	-23	0	multi-exon	FALSE	canonical	3	2428	junction_3	310.145868707844	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405059	140429115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
Isoform_59499_50	chr5	+	3000	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-53	-2	-53	2	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCCTGATCTCTTTG	NA	False	NA	17	True	AATAAA	-18	NA	140405029	140429117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
Isoform_59514_3	chr5	-	542	2	Antisense	novelGene_ENSMUSG00000056076.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCAATGGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	140429117	140428138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_140428191_140428627
Isoform_59516_15	chr5	+	1780	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	65	486	40	-486	multi-exon	FALSE	canonical	3	68	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	19	True	AGTAAA	-15	NA	140491369	140510993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140491452_140509295
Isoform_59517_6	chr5	+	1783	2	FSM	ENSMUSG00000036599.11	ENSMUST00000124142.2	766	2	68	-1085	68	-486	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	19	True	AGTAAA	-15	NA	140491397	140510993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140491483_140509295
Isoform_59518_6	chr5	+	2287	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	21	-3	21	3	multi-exon	FALSE	canonical	2	6	junction_3	5.13888735674427	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCCCTAGTCTTGCTT	NA	False	NA	10	True	AATAAA	-21	NA	140593095	140601303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
Isoform_59520_161	chr5	+	3310	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	12	11	0	-11	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAAGTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	140690777	140705123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_59522_3	chr5	+	3140	13	NIC	ENSMUSG00000000148.18	novel	3854	13	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.1349673696077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTTCTGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	140690777	140705129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140703656
Isoform_59523_19	chr5	+	3312	14	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	24.0315374643282	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTCTGTCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	140690806	140705130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_59525_5	chr5	+	3463	15	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5197170121024	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTCTGTCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	140690778	140705130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_140690831_140691707_140691852_140695618_140695766_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_59526_24	chr5	+	3445	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	-16	2	0	-2	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTCTTCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	140690804	140705132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_59529_4	chr5	+	3461	14	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	31.3678311077187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTCTTCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	140690812	140705132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
Isoform_59531_9	chr5	+	2621	7	FSM	ENSMUSG00000050022.17	ENSMUST00000120630.3	4037	7	36	1380	-5	1	multi-exon	FALSE	canonical	0	0	junction_3	4.16333199893227	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCATGTATTGTT	NA	False	NA	24	True	NA	NA	NA	140721316	140739066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_140721394_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
Isoform_59533_6	chr5	+	2055	2	ISM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	0	25358	0	17033	5prime_fragment	FALSE	canonical	3	31	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	142387254	142422408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_142387797_142420895
Isoform_59534_8	chr5	+	2389	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	1	5049	1	-5049	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGGGGTTCTGTGT	NA	False	NA	NA	False	CATAAA	-24	NA	142387255	142442717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
Isoform_59535_5	chr5	+	2934	16	ISM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-48	907	7	1	intron_retention	FALSE	canonical	3	53	junction_8	14.7939927748469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	8652	False	NA	15	True	AATAAA	-20	NA	142449760	142463558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
Isoform_59537_128	chr5	+	2784	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	0	905	0	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8700	False	NA	17	True	AATAAA	-22	NA	142449808	142463560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59538_6	chr5	+	3697	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-2	-6	-2	6	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8698	False	NA	10	True	AATAAA	-20	NA	142449806	142464471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59539_4	chr5	+	2884	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-100	905	10	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8600	False	NA	17	True	AATAAA	-22	NA	142449708	142463560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59540_6	chr5	+	3146	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-2	3	intron_retention	FALSE	canonical	3	53	junction_8	14.5134420452214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8698	False	NA	17	True	AATAAA	-22	NA	142449806	142463560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59541_7	chr5	+	2771	17	FSM	ENSMUSG00000039623.14	ENSMUST00000196055.2	2965	17	-57	251	18	1	multi-exon	FALSE	canonical	0	0	junction_11	25.1941678519057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	8663	False	NA	15	True	AATAAA	-20	NA	142449771	142463558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59542_8	chr5	+	3139	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-22	3	intron_retention	FALSE	canonical	3	53	junction_8	15.4324333790883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8668	False	NA	17	True	AATAAA	-22	NA	142449776	142463560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59543_7	chr5	+	2867	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	63	junction_7	13.0632648633061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8680	False	NA	14	True	AATAAA	-19	NA	142449788	142463557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
Isoform_59544_9	chr5	+	2491	7	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	-31	4784	20	-6	5prime_fragment	FALSE	canonical	3	395	junction_3	22.8983259941275	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142615316	142648458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779
Isoform_59546_476	chr5	+	2106	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	13	3052	13	49	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGGGACTAGCTTCC	NA	False	NA	17	True	ATTAAA	-17	NA	142615309	142653291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_59547_38	chr5	+	2131	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-12	3052	-12	49	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGGGACTAGCTTCC	NA	False	NA	17	True	ATTAAA	-17	NA	142615284	142653291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_59548_91	chr5	+	4240	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	13	918	13	-918	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCCAGAGTCAAGTGC	NA	False	NA	12	True	AATAAA	-13	NA	142615309	142655425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
Isoform_5956_16	chr11	-	2577	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	-54	1	-15	-1	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGAGTGTCCTGTGCTGG	NA	False	NA	1	True	ATTAAA	-39	NA	69839029	69833369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
Isoform_59562_44	chr5	+	2789	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCTGTCCTGAGGAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	142687855	142708245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
Isoform_59565_7321	chr5	+	2660	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	13	2	13	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	7321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946110	142958938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
Isoform_59578_30	chr5	+	4348	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	34	883	34	3	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTGTGTATGCTTCCT	NA	False	NA	14	True	AATGAA	-6	NA	143220962	143233706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
Isoform_59580_5	chr5	+	2542	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	4	2719	4	1485	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTACTAAGCGTCATA	NA	False	NA	NA	False	NA	NA	NA	143220932	143231870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
Isoform_59581_6	chr5	+	4424	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-48	8	25	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAATTGTGTATGCTT	NA	False	NA	11	True	AATGAA	-3	NA	143220953	143233703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
Isoform_59582_342	chr5	+	1837	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-12	4	-12	-4	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATGTATGGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	143389580	143407652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
Isoform_59584_10	chr5	+	1880	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-55	4	-55	-4	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATGTATGGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	143389537	143407652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
Isoform_5959_15	chr11	-	1229	7	FSM	ENSMUSG00000018565.18	ENSMUST00000123701.9	1259	7	31	-1	-21	1	multi-exon	FALSE	canonical	3	523	junction_1	38.6393581727233	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9920	False	NA	-3	True	AATAAA	-27	NA	69871058	69859052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824
Isoform_59591_13	chr5	+	926	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	-7	0	-7	0	multi-exon	TRUE	canonical	3	93	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	False	NA	9	True	AATAAA	-14	NA	143534493	143537693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143534890_143537163
Isoform_59592_4	chr5	+	2268	3	FSM	ENSMUSG00000118332.2	ENSMUST00000101434.5	2276	3	-13	21	2	-21	multi-exon	FALSE	canonical	0	0	junction_2	46.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATGTTTTATTTTGT	NA	False	NA	5	True	AATAAA	-18	NA	143534502	143550259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143534890_143537163_143537297_143548511
Isoform_59593_183	chr5	+	2183	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	15	0	13	0	multi-exon	FALSE	canonical	3	103	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534475	143550280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143534890_143548511
Isoform_59595_56	chr5	+	3677	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	52	9	-2	-9	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAAACTGCCTAAGAC	NA	False	NA	-4	True	AATAAA	-13	NA	143608253	143695996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
Isoform_596_5	SIRV8002	+	2463	1	FSM	SIRV8002A	SIRV8002	8000	1	5537	0	5537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	5537	8000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_5500_8000
Isoform_5960_249	chr11	-	1106	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	989	3	0	1	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9889	False	NA	-3	True	AATAAA	-27	NA	69871089	69859052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_59600_95	chr5	+	2772	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	19	1534	19	-1534	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803561	143839535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
Isoform_59603_4	chr5	+	4302	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	20	3	20	-3	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAAGACACTGTTGGT	NA	False	NA	NA	False	AATAAA	-28	NA	143803562	143841066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
Isoform_59605_3	chr5	+	928	4	FSM	ENSMUSG00000079109.12	ENSMUST00000154781.8	955	4	-24	51	2	-51	multi-exon	FALSE	canonical	3	79	junction_1	13.490737563232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATGCTTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	143846818	143851058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436
Isoform_59607_3	chr5	+	3231	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	38	2213	-2	313	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCAGCTCTCAATCCCG	NA	False	NA	2	True	ATTAAA	-19	NA	143846819	143868573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_59608_4	chr5	+	2693	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	26	2763	0	0	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAGGTTTTAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	143846807	143868023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_59609_14	chr5	+	2924	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	27	2526	1	0	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846808	143868260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_5961_12	chr11	-	1891	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	204	3	204	1	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9104	False	NA	-3	True	AATAAA	-27	NA	69871874	69859052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_59610_6	chr5	+	2777	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.7468032696655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTGCAGTTACTGTT	NA	False	NA	NA	False	AAAAAG	-21	NA	143846824	143868264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_59611_4	chr5	+	3093	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	0	317	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.7468032696655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCTCAATCCCGACTC	NA	False	NA	6	True	ATTAAA	-23	NA	143846821	143868577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
Isoform_59612_4	chr5	+	2113	4	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-72	-52464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	30.7354301526214	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	144037181	144072558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_144037595_144066170_144066296_144070953_144071504_144071533
Isoform_59613_11	chr5	+	3494	2	FSM	ENSMUSG00000052271.8	ENSMUST00000060747.8	3494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGTATAAATTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	144127103	144131259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_144127177_144127838
Isoform_59614_408	chr5	+	756	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	27	172	27	7	multi-exon	FALSE	canonical	3	246	junction_1	16.5	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTCTGCTCGACCATG	1656	False	NA	7	True	AATAAA	-22	NA	144192070	144201212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_144192330_144192619_144192723_144200818
Isoform_59617_8	chr5	+	926	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	27	2	27	-2	multi-exon	FALSE	canonical	3	246	junction_1	16.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTGCAGTCAAGGTA	1656	False	NA	1	True	ATTAAA	-14	NA	144192070	144201382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_144192330_144192619_144192723_144200818
Isoform_5962_46	chr11	-	1386	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	708	4	152	0	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9608	False	NA	-4	True	AATAAA	-26	NA	69871370	69859053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_59620_293	chr5	+	2551	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTTCTTGTTCTCTC	NA	False	NA	11	True	ATTAAA	-17	NA	144482696	144494288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
Isoform_59622_10	chr5	+	2579	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-45	2	-45	-2	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGCTTCTTGTTCTC	NA	False	NA	9	True	ATTAAA	-15	NA	144482666	144494286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
Isoform_59625_19	chr5	+	525	5	ISM	ENSMUSG00000045482.17	ENSMUST00000136379.2	2621	12	56	9922	56	857	5prime_fragment	FALSE	canonical	3	42	junction_1	9.03811374126261	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTTGACAATTCTCT	NA	False	NA	NA	False	NA	NA	NA	144704957	144714795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690
Isoform_59627_4	chr5	+	2969	11	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	57090	4	3630	-4	3prime_fragment	FALSE	canonical	3	101	junction_1	19.0934543757802	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTGTGCCCTA	8091	False	NA	NA	False	AATAAA	-10	NA	144779424	144796582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
Isoform_59630_441	chr5	+	1577	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	50	5	-4	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTTTCTTTAT	NA	False	NA	17	True	ATTAAA	-18	NA	145020689	145045566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
Isoform_59637_1880	chr5	+	1424	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	41	1640	-2	-14	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	1880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8073	False	NA	-98	True	AAGAAA	-32	NA	145051065	145064869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
Isoform_5964_4	chr11	-	881	7	FSM	ENSMUSG00000018565.18	ENSMUST00000142788.8	899	7	9	9	0	1	multi-exon	FALSE	canonical	3	37	junction_4	199.487468278085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAACCTCTGGTAATGC	9889	False	NA	-7	True	AATAAA	-23	NA	69871089	69859056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69870655_69870737_69870824_69870886_69871039
Isoform_59649_14	chr5	+	781	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	-34	-6	12	2	multi-exon	FALSE	canonical	3	42	junction_2	311.754133894003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTTTAAGAGTGCC	NA	False	NA	22	True	AATAAA	-23	NA	145077183	145084890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_5965_9	chr11	-	924	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	199.363710060003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGGTAATGCTTAA	9889	False	NA	-3	True	AATAAA	-27	NA	69871089	69859052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69865865_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_59650_451	chr5	+	819	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	44	4	-2	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077215	145084884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_59651_92	chr5	+	849	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	14	4	14	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077185	145084884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_59652_86	chr5	+	916	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	19	-7	19	0	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTTTTAAGAGTG	NA	False	NA	20	True	AATAAA	-21	NA	145077243	145084888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
Isoform_59656_15	chr5	+	1774	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-17	-1	6	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104039	145118851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
Isoform_59658_227	chr5	+	1693	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-18	-288	-11	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104045	145118851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
Isoform_59661_169	chr5	+	1679	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	34	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104056	145118851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
Isoform_59664_33	chr5	+	3811	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-23	6	-23	-6	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCTGACTTGAGGTT	914	False	NA	4	True	ATTAAA	-9	NA	145141348	145158554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
Isoform_59666_21	chr5	+	1277	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	13	475	-1	-1	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGTACTTTTTGTA	1304	False	NA	NA	False	AATACA	-15	NA	145168537	145174657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
Isoform_59667_3	chr5	+	1142	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	8	0	8	0	multi-exon	FALSE	canonical	2	3	junction_3	192.902969276151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1313	False	NA	NA	False	AATACA	-16	NA	145168546	145174658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
Isoform_59668_8	chr5	+	4172	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-13	-2	-13	1	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACTCTTTGTTTTGAGC	1318	False	NA	17	True	NA	NA	NA	145168551	145184113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
Isoform_5967_5	chr11	-	460	4	ISM	ENSMUSG00000018565.18	ENSMUST00000147437.3	627	6	2254	-110	0	110	3prime_fragment	FALSE	canonical	3	471	junction_3	38.0525951808809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCCACCCCTTTCCA	9889	False	NA	NA	False	AATACA	-14	NA	69871089	69865818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_69866087_69870655_69870737_69870824_69870886_69871039
Isoform_59670_3	chr5	+	1056	3	FSM	ENSMUSG00000007812.17	ENSMUST00000199003.5	601	3	-19	-436	8	0	multi-exon	FALSE	canonical	3	21	junction_2	213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1313	False	NA	NA	False	AATACA	-16	NA	145168546	145174658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145173859
Isoform_59671_74	chr5	+	4085	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	23	-4	-9	4	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTGTTTTGAGCCAA	1322	False	NA	20	True	NA	NA	NA	145168555	145184116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
Isoform_59676_3	chr5	+	1994	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-20	2130	-12	-2129	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGATTATTTTCATA	1279	False	NA	NA	False	AATATA	-15	NA	145168512	145181982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
Isoform_59677_12	chr5	+	2848	7	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-11	961	at_least_one_novel_splicesite	FALSE	non_canonical	1	13	junction_6	17.2143351115671	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTAACTTTCCTGTAAA	2762	False	NA	8	True	AATAAA	-21	NA	145217298	145229049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_145217438_145220188_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139_145228286_145228306
Isoform_59679_81	chr5	+	2897	7	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-29	965	at_least_one_novel_splicesite	TRUE	non_canonical	1	13	junction_6	15.0074055793206	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTCCTGTAAATTCC	2744	False	NA	12	True	AATAAA	-25	NA	145217280	145229053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139_145228286_145228306
Isoform_5968_321	chr11	-	2151	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	13	4	4	2	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCGTGAATGTCACT	NA	False	NA	0	True	AATAAA	-17	NA	69906221	69901012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
Isoform_59682_16	chr5	+	3057	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-90	6	-32	-6	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGTATGGTGTCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	146168007	146239678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_59684_6	chr5	+	2928	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	AATAAA	-18	NA	146167996	146239682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
Isoform_59686_4	chr5	+	4891	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	302	3	302	-3	multi-exon	FALSE	canonical	3	97	junction_1	19.5037191768236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGGTTCTGCTTATTT	NA	False	NA	12	True	AATAAA	-16	NA	146322096	146410422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
Isoform_59687_3	chr5	+	1839	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	262	3095	262	2264	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCTGGATTTGTTGAG	NA	False	NA	11	True	NA	NA	NA	146322056	146407330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
Isoform_59688_4	chr5	+	700	5	ISM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	258	1047	2	0	intron_retention	FALSE	canonical	3	6955	junction_1	2734.85689753596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769957	146772795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373
Isoform_59689_76	chr5	+	781	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	27	1048	27	-1	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGAAGTGTTTTCCTT	NA	False	NA	0	True	AATAAA	-14	NA	146769726	146772794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_5969_15	chr11	-	2088	19	FSM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	-12	-56	0	1	multi-exon	FALSE	canonical	3	15	junction_17	40.1080331229001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGCCGTGAATGTCAC	NA	False	NA	-1	True	AATAAA	-16	NA	69906225	69901013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905942_69906022_69906088
Isoform_59691_14	chr5	+	835	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	-24	1045	-24	1	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGTGTTTTCCTTAGA	NA	False	NA	3	True	AATAAA	-17	NA	146769675	146772797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_59693_3	chr5	+	1491	4	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	6955	junction_1	2156.18680905796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769959	146772796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_146769982_146770993_146771073_146771257_146772525_146772673
Isoform_59694_10	chr5	+	648	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	5852.7472585293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769954	146772796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_146769982_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_59695_17	chr5	+	929	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	-29	-1	20	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769975	146772796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_59696_45	chr5	+	1093	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	-26	0	-19	0	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769985	146772796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
Isoform_5970_9	chr11	-	2571	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	-40	0	30	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGATGGTCAAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	70111860	70107614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
Isoform_59701_12	chr5	+	1102	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	24	0	24	0	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTTTTCTGAATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	146781904	146784536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
Isoform_59703_187	chr5	+	1439	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-13	0	-6	0	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885501	146892416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
Isoform_59704_344	chr5	+	1274	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	16	8	16	0	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885482	146892416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
Isoform_59707_190	chr5	+	662	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	529	5	15	-5	multi-exon	FALSE	canonical	3	451	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTTTGAGTGGTTTC	NA	False	NA	17	True	NA	NA	NA	147014388	147015891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_147014504_147015344
Isoform_59708_62	chr5	+	685	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	506	5	-8	-5	multi-exon	FALSE	canonical	3	451	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTTTGAGTGGTTTC	NA	False	NA	17	True	NA	NA	NA	147014365	147015891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_147014504_147015344
Isoform_59710_227	chr5	+	902	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	233	2	15	-2	multi-exon	FALSE	canonical	3	400	junction_1	26.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTTCCTCTTTTGGGT	NA	False	NA	14	True	AATAAA	-15	NA	147014388	147048169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_147014504_147038038_147038114_147047457
Isoform_59713_13	chr5	+	808	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	2	271	2	-271	multi-exon	FALSE	canonical	3	33	junction_2	30.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGATGATTTGAATAT	NA	False	NA	3	True	NA	NA	NA	147355412	147359583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_147355512_147357439_147357607_147359041
Isoform_59715_806	chr5	+	737	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	165	677	-2	168	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATGTGTGTGGTTGGG	NA	False	NA	31	True	AATAAA	-21	NA	147797435	147812589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
Isoform_59719_4	chr5	+	459	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	550	0	-10	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGTACAGAGGCTC	NA	False	NA	5	True	ATTAAA	-13	NA	148239983	148250260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
Isoform_59720_9	chr5	+	1175	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	33	-623	24	12	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148240007	148250893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
Isoform_59723_5	chr5	+	1299	3	ISM	ENSMUSG00000029651.17	ENSMUST00000110514.8	1532	8	37835	-45	6	12	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148239989	148250893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_148240413_148243439_148243538_148250115
Isoform_59724_7	chr5	+	521	2	NNC	ENSMUSG00000086494.2	novel	550	2	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCTACCCTTTGACCC	NA	False	NA	NA	False	TTTAAA	-8	NA	148678645	148679952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_148678795_148679580
Isoform_59725_7	chr5	+	3583	9	FSM	ENSMUSG00000041264.17	ENSMUST00000119685.8	3604	9	25	-4	14	0	multi-exon	FALSE	canonical	3	22	junction_2	126.885713833355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121501	149152244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_59726_4	chr5	+	3080	10	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	19	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	135.337438361387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTTCATTTTGTGAT	NA	False	NA	18	True	ATTAAA	-18	NA	149121506	149152246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_59728_49	chr5	+	3650	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	107	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_59729_4	chr5	+	3737	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	20	0	20	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121389	149152244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_59731_23	chr5	+	3148	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	2	-2	1	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121477	149152243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_59734_52	chr5	+	3481	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	317	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
Isoform_59735_17	chr5	+	2954	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-23	0	15	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121502	149152243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
Isoform_59737_3	chr5	+	943	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	194	114	194	-5	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAGCCCATGGCTCA	NA	False	NA	-94	True	AATAAA	-12	NA	149201770	149224849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
Isoform_59739_10	chr5	+	1378	2	FSM	ENSMUSG00000106674.2	ENSMUST00000202583.2	299	2	-4	-1075	-4	1075	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTGAGTCCTGGGTA	NA	False	NA	7	True	NA	NA	NA	149565070	149572330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149565217_149571098
Isoform_5974_74	chr11	-	869	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	10	1	0	-1	multi-exon	FALSE	canonical	3	195	junction_1	133.830340356737	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128730	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59740_6	chr5	+	1344	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	156.846059531416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAACAGAATTCACTG	NA	False	NA	NA	False	AATAAA	-15	NA	149601716	149674597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149674495
Isoform_59741_281	chr5	+	1841	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	13	2716	13	-724	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601707	149683348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
Isoform_59742_16	chr5	+	4551	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	19	0	19	0	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601713	149686064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
Isoform_59747_13	chr5	+	1078	11	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	13	-9934	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	165.154503420282	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGAGTGTTTGTTCAT	NA	False	NA	NA	False	ATTAAA	-32	NA	149601707	149664666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149664505
Isoform_59748_4	chr5	+	2282	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-18	5613	-16	-1039	intron_retention	FALSE	canonical	3	58	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACATTTTCTTGCAT	354	False	NA	NA	False	ATTAAA	-10	NA	150446078	150454828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_150446362_150446639_150446745_150452934
Isoform_59754_6	chr5	+	4347	11	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	11	28908	11	1091	5prime_fragment	FALSE	canonical	3	58	junction_1	8.68331733843696	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAGGAAAATATATCAG	395	False	NA	NA	False	AAAACA	-5	NA	150446119	150464304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113
Isoform_59755_3	chr5	+	2808	11	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	-25	30483	-11	-484	5prime_fragment	FALSE	canonical	3	58	junction_1	8.68331733843696	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAAAATAGTCATACAGA	359	False	NA	NA	False	AATATA	-42	NA	150446083	150462729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113
Isoform_59757_3	chr5	+	2122	9	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	34227	0	-95	0	3prime_fragment	FALSE	canonical	3	128	junction_5	12.4799839743487	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	NA	False	NA	13	True	AATAAA	-22	NA	150480335	150493212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
Isoform_59759_6	chr5	+	2506	21	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	134	31554	46	8446	5prime_fragment	FALSE	canonical	3	148	junction_19	14.1826478486917	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGCACTTCTACACT	NA	False	NA	NA	False	NA	NA	NA	150597337	150701776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617
Isoform_5976_7	chr11	-	776	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	1	1	-1	-1	multi-exon	FALSE	canonical	3	142	junction_3	164.364495862093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
Isoform_59760_4	chr5	+	4086	32	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	39	1220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	37.8960185323411	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAGAAGAAGAAAGACAAA	NA	False	NA	10	True	AAGAAA	-42	NA	150597330	150724398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652439_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042
Isoform_59773_5	chr5	+	2622	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4940	42	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGACTTCATTGTCGTCTT	NA	False	NA	16	True	AATATA	-25	NA	108208599	108255378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_5978_9	chr11	-	796	5	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	187.69523169223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128736	70126033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_70126291_70126822_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59785_5	chr5	+	2660	4	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4934	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	715.6819591597	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208605	108256867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_108208730_108228690_108228708_108252291_108252397_108254453
Isoform_5979_15	chr11	-	762	5	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	187.69523169223	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128728	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_70126291_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59795_16	chr5	+	3956	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-3	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTAATGAGTTTTTC	NA	False	NA	30	True	ATTAAA	-31	NA	108208606	108256867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_59798_17	chr5	+	2462	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	37	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTAGACTTCATTGTC	NA	False	NA	11	True	AATATA	-20	NA	108208606	108255373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
Isoform_598_6	SIRV8002	+	2039	1	FSM	SIRV8002A	SIRV8002	8000	1	5959	2	5959	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	5959	7998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_6000_8000
Isoform_59806_324	chr5	+	789	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1155	-5	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603165	115612776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
Isoform_59807_17	chr5	+	786	5	NNC	ENSMUSG00000029522.13	novel	387	4	NA	NA	-1155	-5	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_2	919.936546724827	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603165	115612776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_115603279_115604200_115604380_115608843_115609001_115610051_115610180_115612567
Isoform_59808_24	chr5	+	629	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1155	-5	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_2	947.073738769409	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603165	115612776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_115603279_115604200_115604380_115610051_115610180_115612567
Isoform_59809_42	chr5	+	1948	7	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1384	-22	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2.86744175568088	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	135380764	135396837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
Isoform_59810_5	chr5	+	1950	7	NNC	ENSMUSG00000053388.11	novel	1803	6	NA	NA	-1391	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25718035235908	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	135380757	135396835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392906_135392927_135395394_135395520_135395927
Isoform_59811_10	chr5	+	891	4	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5441	-4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	319.679005670793	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGATGTGCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	64955289	64980448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221
Isoform_59815_6	chr5	+	2243	2	Antisense	novelGene_ENSMUSG00000097640.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTTTGTTCTTTTT	NA	False	NA	NA	False	ACTAAA	-13	NA	64955289	64959715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_+_64955374_64957556
Isoform_59816_9	chr5	+	1774	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-28	1	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187874	100216620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
Isoform_59817_8	chr5	+	2784	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-971	9	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGACGTGTGGATTGT	NA	False	NA	24	True	AATAAA	-24	NA	100186872	100216628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
Isoform_5982_30	chr11	-	882	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108576.10	576	6	-109	-197	-1	-1	multi-exon	FALSE	canonical	3	107	junction_1	159.443532324143	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126295_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59820_11	chr5	+	2732	5	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-11	1	intron_retention	FALSE	canonical	3	76	junction_1	184.982431598247	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187891	100216620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_100188133_100206998_100207101_100208832_100210135_100211617_100211742_100215657
Isoform_59823_10	chr5	+	3662	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-257	-2	intron_retention	FALSE	canonical	3	23	junction_1	266.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTAGTGGTTCACAACC	4634	False	NA	17	True	AATAAA	-28	NA	105848397	105963074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105848430_105880095_105880241_105959589
Isoform_59824_8	chr5	+	3747	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-344	-4	intron_retention	FALSE	canonical	3	23	junction_1	266.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCGTAGTGGTTCACAA	4547	False	NA	15	True	AATAAA	-26	NA	105848310	105963072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105848430_105880095_105880241_105959589
Isoform_59826_3	chr5	+	1578	3	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	32	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAGAAAGGAAG	651	False	NA	NA	False	NA	NA	NA	115341970	115344110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115342214_115342747_115343607_115343634
Isoform_59827_23	chr5	+	844	2	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCTGGCAAACCTT	651	False	NA	40	True	CATAAA	-17	NA	115341970	115343348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115342214_115342747
Isoform_59828_4	chr5	+	1924	15	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28092	6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	24.8293152938051	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGCCTAAGAATGTG	NA	False	NA	11	True	AAAACA	-14	NA	35943486	36015536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
Isoform_59831_19	chr5	+	2095	12	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	2843	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5912346954217	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	3224	False	NA	17	True	AATAAA	-20	NA	37245556	37282643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_59835_12	chr5	+	820	2	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCTGGCAAACCTT	651	False	NA	40	True	CATAAA	-17	NA	115341970	115343348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115342190_115342747
Isoform_59837_10	chr5	+	1416	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-260	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCATCTGTTATGTATA	7178	False	NA	7	True	ATTAAA	-14	NA	8901126	8916312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
Isoform_59838_3	chr5	+	1311	5	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-293	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	125.276693762248	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATGTATATGAATTTAT	7145	False	NA	16	True	ATTAAA	-23	NA	8901093	8916321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8915749
Isoform_59839_5	chr5	+	3145	14	NNC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	25.1993237440961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490987	112526279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_112491367_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
Isoform_59843_7	chr5	+	2117	12	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	2843	-2	multi-exon	FALSE	canonical	3	9	junction_1	48.7096304561383	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	3224	False	NA	15	True	AATAAA	-18	NA	37245556	37282641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr5_+_37245675_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
Isoform_59844_7	chr5	+	2224	11	NNC	ENSMUSG00000029482.5	novel	527	3	NA	NA	-1299	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.0616604997733	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	5	True	AATAAA	-22	NA	125585257	125594469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_125585326_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
Isoform_59846_5	chr5	+	1630	3	NNC	ENSMUSG00000034211.15	novel	859	3	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	437	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGTTTTGGCAGCTTG	939	False	NA	18	True	CATAAA	-7	NA	129792745	129795539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_129793676_129793790_129793931_129794979
Isoform_59847_10	chr5	+	2685	3	NNC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-13491	2085	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAAGTTTTATTTG	8879	False	NA	NA	False	AATAAA	-27	NA	105693232	105756823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_105693317_105727333_105727476_105754364
Isoform_5985_7	chr11	-	775	5	NIC	ENSMUSG00000020831.19	novel	576	6	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	180.473509136383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70128737	70126035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_70126295_70126521_70126627_70126849_70127038_70128356_70128452_70128609
Isoform_59850_7	chr5	+	549	4	NNC	ENSMUSG00000106918.4	novel	638	4	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	962.363179308565	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTTGTCTCTTAGAGG	NA	False	NA	16	True	AATAAA	-19	NA	31771342	31779985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_31771501_31771946_31771966_31773724_31773832_31779720
Isoform_59851_4	chr5	+	3433	2	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	40	3136	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	3172	False	NA	NA	False	NA	NA	NA	135093095	135097852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_135094257_135095580
Isoform_59852_4	chr5	+	3214	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8036	-63	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	59.5979728459529	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATCCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	8761782	8798507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_8761933_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
Isoform_59854_5	chr5	+	760	2	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGACTGACTGTTTTG	NA	False	NA	NA	False	AGTAAA	-12	NA	110014588	110018021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_110014679_110017351
Isoform_59859_4	chr5	+	2445	4	NNC	ENSMUSG00000034173.14	novel	2492	4	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2142.10711424263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTGTCTCAAAAAA	6124	False	NA	NA	False	AATAAA	-12	NA	129924682	129932459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_129924771_129928023_129928274_129929185_129929337_129930503
Isoform_59860_5	chr5	+	2962	6	NNC	ENSMUSG00000029163.10	novel	601	3	NA	NA	2468	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.09918027279076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTACAAAACATAGCTATT	NA	False	NA	10	True	AATAAA	-15	NA	31073550	31078609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_31073663_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
Isoform_59861_4	chr5	+	1341	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3816	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	163	False	NA	11	True	TATAAA	-21	NA	120812841	120817662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
Isoform_59862_4	chr5	+	1227	8	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	-17	-11	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	118.273808924677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTGACTTGTGTTT	NA	False	NA	9	True	AATAAA	-12	NA	104194717	104213234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_104194746_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
Isoform_59863_3	chr5	+	2353	3	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	9527	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	30.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGAAGCTGACTTGA	NA	False	NA	0	True	ATTAAA	-5	NA	145154904	145158550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_+_145154973_145155096_145155694_145156862
Isoform_59866_5	chr5	-	2810	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88313240	88310430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_88310400_88313200
Isoform_59867_7	chr5	-	1895	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	88312324	88310429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_88310400_88312300
Isoform_59868_3	chr5	-	2908	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	89354659	89351751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_89351800_89354700
Isoform_5987_30	chr11	-	793	5	NIC	ENSMUSG00000020831.19	novel	779	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	190.587742260619	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128728	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_70126295_70126822_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59873_30	chr5	+	1657	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	-34	6	-34	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGTTTGTAATA	NA	False	NA	14	True	AATAAA	-16	NA	88702286	88703943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88702300_88703900
Isoform_59879_97	chr5	+	1627	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	-4	6	-4	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGTTTGTAATA	NA	False	NA	14	True	AATAAA	-16	NA	88702316	88703943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_88702300_88703900
Isoform_5988_5	chr11	-	704	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	-65	4	-4	-2	multi-exon	FALSE	canonical	3	53	junction_1	223.35671519393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70128744	70126035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126295_70126822_70127038_70128356_70128452_70128609
Isoform_59896_3	chr5	-	3344	1	FSM	ENSMUSG00000029397.16	ENSMUST00000200905.2	1046	1	-402	-1896	-60	1896	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1275	False	NA	NA	False	NA	NA	NA	92110987	92107643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92107600_92111000
Isoform_5990_78	chr11	-	766	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	12	1	0	-1	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128728	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
Isoform_59902_15	chr5	-	167	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2249	False	NA	NA	False	NA	NA	NA	92261415	92261248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_92261200_92261400
Isoform_59904_6	chr5	-	196	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	474	-34	474	34	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	92288314	92288118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92288100_92288300
Isoform_59907_6	chr5	-	530	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	93	13	93	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATAATTCTGTG	NA	False	NA	NA	False	AAAAAG	-31	NA	92288695	92288165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_92288200_92288700
Isoform_59911_7	chr5	+	178	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	92364079	92364257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_92364100_92364300
Isoform_59912_21	chr5	-	184	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92528182	92527998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_92528000_92528200
Isoform_59913_10	chr5	-	3137	1	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	1	-1078	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	92582981	92579844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_92579800_92583000
Isoform_59916_3	chr5	+	655	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	4832	False	NA	NA	False	NA	NA	NA	92902985	92903640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_92903000_92903600
Isoform_59917_6	chr5	-	201	1	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCAAACAATCAGAATAAG	NA	False	NA	NA	False	NA	NA	NA	93116831	93116630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_93116600_93116800
Isoform_59918_7	chr5	-	3897	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-44	47	-44	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTGTTTCATTGTA	19	False	NA	-51	True	AATGAA	-16	NA	93192925	93189028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_93189000_93192900
Isoform_59919_3	chr5	-	3973	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-121	48	-121	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTTGTTTCATTGT	NA	False	NA	-52	True	AATGAA	-15	NA	93193002	93189029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_93189000_93193000
Isoform_5992_18	chr11	-	675	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	-9	1	-1	-1	multi-exon	FALSE	canonical	3	142	junction_2	177.768263634304	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTGCCAGCTGCC	NA	False	NA	-13	True	ATTAAA	-14	NA	70128739	70126032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
Isoform_59920_8	chr5	-	3823	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-64	141	-64	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTATGTTATTATATTG	-1	True	NA	NA	False	ATTAAA	-15	NA	93192945	93189122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_93189100_93192900
Isoform_59921_33	chr5	+	2566	1	FSM	ENSMUSG00000058013.12	ENSMUST00000201377.2	640	1	-1	-1925	0	1925	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	93241295	93243861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_93241300_93243900
Isoform_59922_10	chr17	-	177	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACATAGAAA	NA	False	NA	NA	False	NA	NA	NA	66915444	66915267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_66915300_66915400
Isoform_59923_2534	chr11	-	1253	1	FSM	ENSMUSG00000078965.6	ENSMUST00000180654.2	1002	1	-72	-179	-72	179	mono-exon	FALSE	NA	NA	NA	NA	NA	2534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4389	False	NA	NA	False	AATAAA	-15	NA	20286085	20284832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_20284800_20286100
Isoform_59925_6	chr6	-	1203	6	NNC	ENSMUSG00000057666.19	novel	1273	7	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	3	681	junction_5	4120.74687405087	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125141905	125138814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141861
Isoform_59930_6	chr2	-	694	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	486	-180	486	180	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	28824135	28823441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28823400_28824100
Isoform_59932_8	chr2	-	510	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	671	-181	671	181	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	28823950	28823440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_-_28823400_28824000
Isoform_59934_8	chr5	+	648	1	FSM	ENSMUSG00000107092.2	ENSMUST00000200970.2	1384	1	1070	-334	1070	334	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAACACAC	NA	False	NA	NA	False	AATAAA	-18	NA	96123168	96123816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_96123200_96123800
Isoform_59936_4	chr5	+	1853	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	AATAGA	-26	NA	96315865	96317718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_96315900_96317700
Isoform_59937_5	chr5	-	1363	1	NIC	ENSMUSG00000046000.6	novel	3424	2	NA	NA	44	-8775	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGGGACAAAAAGC	NA	False	NA	NA	False	AATATA	-9	NA	97540194	97538831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_97538800_97540200
Isoform_59938_7	chr5	+	879	1	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATGTAATTCTC	NA	False	NA	NA	False	NA	NA	NA	98153939	98154818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_98153900_98154800
Isoform_59940_4	chr5	+	190	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	100094946	100095136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_100094900_100095100
Isoform_59943_3	chr5	-	874	1	Genic_Genomic	ENSMUSG00000085915.2	novel	NA	NA	NA	NA	-175	-133981	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100503153	100502279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_100502300_100503200
Isoform_59944_3	chr5	-	2593	1	FSM	ENSMUSG00000105755.2	ENSMUST00000198852.2	424	1	-200	-1969	-200	1969	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	TTTAAA	-42	NA	100968819	100966226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_100966200_100968800
Isoform_59946_8	chr7	+	177	1	Intergenic	novelGene_1794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33859263	33859440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_33859300_33859400
Isoform_59948_3	chr5	+	194	1	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	103654737	103654931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_103654700_103654900
Isoform_59949_3	chr5	+	267	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAATAAATAAATCA	NA	False	NA	NA	False	NA	NA	NA	103752189	103752456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_103752200_103752500
Isoform_59951_5	chr5	+	176	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATATGAGT	NA	False	NA	NA	False	NA	NA	NA	104158914	104159090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_104158900_104159100
Isoform_59952_3	chr5	+	192	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAACCT	1605	False	NA	NA	False	NA	NA	NA	104172292	104172484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_104172300_104172500
Isoform_59953_3	chr5	-	185	1	Antisense	novelGene_ENSMUSG00000097877.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTTTAAAAATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	104267182	104266997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_104267000_104267200
Isoform_59957_8	chr5	-	2002	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	104608205	104606203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_104606200_104608200
Isoform_59958_8	chr5	-	1903	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAGTGGTAATATTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	104608233	104606330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_104606300_104608200
Isoform_5996_208	chr11	-	617	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-7	1	-7	-1	multi-exon	FALSE	canonical	3	718	junction_2	4	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGCTGTCTGTGCTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	70130675	70128950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70129297_70129763_70129841_70130481
Isoform_59960_19	chr5	+	180	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104725134	104725314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_104725100_104725300
Isoform_59961_5	chr5	-	176	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAACTCAAACA	NA	False	NA	NA	False	NA	NA	NA	104826631	104826455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_104826500_104826600
Isoform_59963_3	chr5	+	2222	1	FSM	ENSMUSG00000045435.10	ENSMUST00000196723.2	2178	1	-42	-2	-42	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAATAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	21087462	21089684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_21087500_21089700
Isoform_59964_5	chr5	-	202	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACTAAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	104809000	104808798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_104808800_104809000
Isoform_59965_3	chr5	+	214	1	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGTAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	21150959	21151173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_21151000_21151200
Isoform_59967_9	chr5	-	865	1	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	26	-30790	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21156794	21155929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_21155900_21156800
Isoform_59969_3	chr5	-	454	1	FSM	ENSMUSG00000067058.8	ENSMUST00000132586.2	393	1	-26	-35	-26	35	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAATAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	105945605	105945151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_105945200_105945600
Isoform_59970_22	chr5	-	1253	1	FSM	ENSMUSG00000094708.2	ENSMUST00000180167.2	1002	1	-72	-179	-72	179	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	106011640	106010387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_106010400_106011600
Isoform_59974_7	chr5	-	1030	1	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	0	-437	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106844692	106843662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_106843700_106844700
Isoform_59977_3	chr15	+	178	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGATTTAAAAAAAAA	4475	False	NA	NA	False	NA	NA	NA	77738107	77738285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_77738100_77738300
Isoform_59979_7	chr5	+	191	1	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	108041899	108042090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_108041900_108042100
Isoform_5998_18	chr11	-	613	3	ISM	ENSMUSG00000040904.11	ENSMUST00000176116.8	1688	8	-19	2919	-19	-2875	5prime_fragment	FALSE	canonical	3	75	junction_2	325.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGCTGTCTGTGCTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	70130675	70128950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_70129297_70129763_70129841_70130485
Isoform_59980_6	chr5	+	197	1	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGTTTGCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	21232792	21232989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_21232800_21233000
Isoform_59981_4	chr5	+	353	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGAGACCTCTTCCAA	NA	False	NA	NA	False	AAGAAA	-19	NA	108117913	108118266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_108117900_108118300
Isoform_59982_5	chr5	+	181	1	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTTAAATTGTTTT	NA	False	NA	1	True	NA	NA	NA	108199111	108199292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_108199100_108199300
Isoform_59983_4	chr5	-	180	1	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATGGTAAGAGT	NA	False	NA	NA	False	NA	NA	NA	108207579	108207399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_108207400_108207600
Isoform_59986_4	chr5	+	213	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTATTTCTTTTAACA	NA	False	NA	NA	False	NA	NA	NA	108388160	108388373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_108388200_108388400
Isoform_59987_80	chr5	+	167	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATCTTTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	108479581	108479748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_108479600_108479700
Isoform_59988_3	chr9	-	178	1	Intergenic	novelGene_2075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75348269	75348091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_75348100_75348300
Isoform_59989_9	chr15	+	178	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98901271	98901449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_98901300_98901400
Isoform_5999_21	chr11	-	2342	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	16	643	4	-643	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACATGTCACAGGGTC	7418	False	NA	1	True	NA	NA	NA	70146163	70132925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_59990_3	chr5	-	867	1	NIC	ENSMUSG00000072762.10	novel	599	3	NA	NA	-117	-12017	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTTAAAAAAACAAAAGA	7829	False	NA	NA	False	NA	NA	NA	109899580	109898713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_109898700_109899600
Isoform_59991_5	chr5	-	908	1	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	110234226	110233318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_110233300_110234200
Isoform_59992_3	chr5	-	1028	1	Genic_Genomic	ENSMUSG00000109771.2	novel	NA	NA	NA	NA	-11	-14130	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	110242297	110241269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_110241300_110242300
Isoform_59995_30	chr5	-	781	1	NIC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	-10	-3502	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110417730	110416949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_110416900_110417700
Isoform_6_11662	ERCC-00002	+	1043	1	FSM	ERCC-00002A	DQ459430	1045	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00002_+_0_1000
Isoform_60000_3	chr5	-	3371	2	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110585451	110582058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_110584013_110584034
Isoform_60003_5	chr5	+	2032	1	Genic_Genomic	ENSMUSG00000033209.18	novel	NA	NA	NA	NA	-5	-32487	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	111027663	111029695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_111027700_111029700
Isoform_60004_22	chr5	+	675	1	Genic_Genomic	ENSMUSG00000050017.12	novel	NA	NA	NA	NA	-5	-51681	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACGTTAA	NA	False	NA	NA	False	NA	NA	NA	111478623	111479298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_111478600_111479300
Isoform_60005_8	chr5	-	3812	1	Genic_Genomic	ENSMUSG00000029346.13	novel	NA	NA	NA	NA	-4	486	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCTCAAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112490910	112487098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_112487100_112490900
Isoform_60006_3	chr5	-	1133	1	Antisense	novelGene_ENSMUSG00000105174.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	113472198	113471065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_113471100_113472200
Isoform_60007_3	chr5	-	386	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAATCACAA	2018	False	NA	NA	False	NA	NA	NA	113722761	113722375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_113722400_113722800
Isoform_60008_11	chr5	+	312	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	-23	-85	-23	85	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGTGA	NA	False	NA	16	True	AATAAA	-11	NA	113905160	113905472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_113905200_113905500
Isoform_60009_8	chr5	+	2797	1	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-13	-1453	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3637	False	NA	NA	False	GATAAA	-45	NA	113910850	113913647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_113910800_113913600
Isoform_6001_6	chr11	-	2418	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	16	567	4	-567	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTTAATCTCAGCACC	7418	False	NA	77	True	NA	NA	NA	70146163	70132849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_60010_3	chr3	-	174	1	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	3102116	3101942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_3101900_3102100
Isoform_60011_6	chr10	+	175	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7263	False	NA	NA	False	NA	NA	NA	93268761	93268936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_93268800_93268900
Isoform_60012_4	chr5	-	181	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114218369	114218188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_114218200_114218400
Isoform_60016_6	chr5	-	206	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAACAAACGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	114297615	114297409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_114297400_114297600
Isoform_60019_8	chr4	+	180	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123397742	123397922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_123397700_123397900
Isoform_6002_3	chr11	-	1954	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	-30	390	-18	-390	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGAAAAACCCTGATGA	7384	False	NA	NA	False	AATAAA	-20	NA	70146197	70140178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
Isoform_60020_9	chr5	+	175	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAATTAAAATC	NA	False	NA	NA	False	NA	NA	NA	114754022	114754197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_114754000_114754200
Isoform_60021_16	chr5	-	184	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTGGTAGTGGG	8113	False	NA	-31	True	NA	NA	NA	114845468	114845284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_114845300_114845500
Isoform_60023_1899	chr5	-	621	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-35	-31	-35	31	mono-exon	FALSE	NA	NA	NA	NA	NA	1899	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGTCAAAACAAAACAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	22818215	22817594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_22817600_22818200
Isoform_6003_517	chr11	-	3435	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300854	70283708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
Isoform_60030_8	chr5	+	187	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAGATCTGACATCAC	NA	False	NA	15	True	NA	NA	NA	114967469	114967656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_114967500_114967700
Isoform_60031_5	chr5	-	2362	1	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGACTGGTGGTCGC	NA	False	NA	NA	False	NA	NA	NA	115020259	115017897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_115017900_115020300
Isoform_60032_13	chr5	-	2220	1	FSM	ENSMUSG00000104913.2	ENSMUST00000198588.2	1591	1	-86	-543	-86	543	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	819	False	NA	NA	False	AATAAA	-13	NA	22931252	22929032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_22929000_22931300
Isoform_60033_2283	chr5	-	359	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	-27	-38	-27	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAATCC	NA	False	NA	-14	True	AATAAA	-14	NA	115241607	115241248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115241200_115241600
Isoform_60042_18	chr19	-	178	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	6484736	6484558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_6484600_6484700
Isoform_60043_8	chr5	-	1709	1	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	3	-8362	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTCTTTTAA	4727	False	NA	NA	False	NA	NA	NA	115296235	115294526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_115294500_115296200
Isoform_60044_5	chr5	-	1031	1	Genic_Genomic	ENSMUSG00000029544.17	novel	NA	NA	NA	NA	-1004	-6051	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAGCAGG	9152	False	NA	NA	False	NA	NA	NA	115325371	115324340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_115324300_115325400
Isoform_60045_3	chr5	-	1368	1	Genic_Genomic	ENSMUSG00000029544.17	novel	NA	NA	NA	NA	-1341	-6051	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAGCAGG	8815	False	NA	NA	False	NA	NA	NA	115325708	115324340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_115324300_115325700
Isoform_60046_5	chr5	+	2929	1	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-6	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCACTTGCCTTGAA	NA	False	NA	14	True	AATAAA	-16	NA	115376099	115379028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115376100_115379000
Isoform_60047_13	chr5	-	2265	1	FSM	ENSMUSG00000041740.17	ENSMUST00000200923.2	2276	1	3	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAATTAAAGAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	115410951	115408686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115408700_115411000
Isoform_60051_3	chr5	-	313	2	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	6185	False	NA	NA	False	NA	NA	NA	115458428	115458091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_115458230_115458253
Isoform_60054_3	chr5	+	747	1	NIC	ENSMUSG00000087292.2	novel	414	3	NA	NA	7	-36795	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTAAGTA	4770	False	NA	NA	False	NA	NA	NA	115497143	115497890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_115497100_115497900
Isoform_60055_4	chr5	-	3270	1	FSM	ENSMUSG00000073147.4	ENSMUST00000101522.3	2110	1	576	-1736	-7	1736	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAATAACAACA	NA	False	NA	NA	False	NA	NA	NA	23638341	23635071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23635100_23638300
Isoform_60056_9	chr5	-	1064	1	FSM	ENSMUSG00000073147.4	ENSMUST00000189045.2	1983	1	914	5	-19	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTCTGGTAAATATTC	NA	False	NA	NA	False	AATAAA	-14	NA	23638353	23637289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23637300_23638400
Isoform_60057_3	chr5	-	2028	1	FSM	ENSMUSG00000073147.4	ENSMUST00000189045.2	1983	1	-52	7	-52	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCTTCTGGTAAATAT	NA	False	NA	NA	False	AATAAA	-12	NA	23639319	23637291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_23637300_23639300
Isoform_60058_9	chr5	+	299	1	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAGAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	115603430	115603729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115603400_115603700
Isoform_60059_8	chr5	+	196	1	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGGGCTG	7303	False	NA	NA	False	NA	NA	NA	115639348	115639544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_115639300_115639500
Isoform_60061_3	chr5	+	1953	1	FSM	ENSMUSG00000041638.19	ENSMUST00000202584.2	1918	1	-35	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115703326	115705279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_115703300_115705300
Isoform_60062_4	chr5	-	763	1	FSM	ENSMUSG00000107121.2	ENSMUST00000201728.2	768	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGACATTAGTTTTCC	NA	False	NA	NA	False	AATACA	-17	NA	115769870	115769107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115769100_115769900
Isoform_60064_613	chr5	-	651	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	-51	-117	-51	117	mono-exon	FALSE	NA	NA	NA	NA	NA	613	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	115940269	115939618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_115939600_115940300
Isoform_60066_4	chr5	-	3388	1	NIC	ENSMUSG00000029513.15	novel	2089	7	NA	NA	15	-1342	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	116162495	116159107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_116159100_116162500
Isoform_60067_4	chr5	-	350	1	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	116180958	116180608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_116180600_116181000
Isoform_60068_4	chr5	-	167	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116190749	116190582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_116190600_116190700
Isoform_60069_4	chr5	-	187	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	23655911	23655724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_23655700_23655900
Isoform_60075_3	chr8	-	163	1	Intergenic	novelGene_1957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTTAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107687068	107686905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_107686900_107687100
Isoform_60077_3	chr5	+	1082	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAACAAACAAACAA	2578	False	NA	NA	False	NA	NA	NA	118652174	118653256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_118652200_118653300
Isoform_60080_18	chr5	+	1397	1	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	203321	2	13653	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCGAGTGGCTCTTTTC	NA	False	NA	28	True	AATAAA	-16	NA	118902104	118903501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_118902100_118903500
Isoform_60081_178	chr5	+	2647	1	FSM	ENSMUSG00000018604.19	ENSMUST00000202034.2	2995	1	349	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAGAAGAAAAAAAA	NA	False	NA	NA	False	AATACA	-8	NA	119809082	119811729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_119809100_119811700
Isoform_60090_9	chr5	-	223	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAATTTAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	119847859	119847636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_119847600_119847900
Isoform_60091_3	chr5	-	243	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCACAC	NA	False	NA	NA	False	NA	NA	NA	119869881	119869638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_119869600_119869900
Isoform_60093_6	chr5	-	181	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120354259	120354078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_120354100_120354300
Isoform_60095_8	chr5	-	2653	1	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	0	-13650	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	120641666	120639013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_120639000_120641700
Isoform_60097_8	chr5	-	178	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGCAATCAAATAATA	386	False	NA	NA	False	NA	NA	NA	120777260	120777082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_120777100_120777300
Isoform_6010_11	chr11	-	563	4	FSM	ENSMUSG00000018921.12	ENSMUST00000135148.2	562	4	3	-4	0	4	multi-exon	FALSE	canonical	2	14	junction_1	310.061284264901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCTTTTAAGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	70300854	70293452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70293580_70296452_70296559_70297082_70297148_70300589
Isoform_60103_4	chr5	+	281	1	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAACAATCCAT	8086	False	NA	NA	False	NA	NA	NA	121514996	121515277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_121515000_121515300
Isoform_60105_7	chr5	-	695	1	Antisense	novelGene_ENSMUSG00000042605.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAGTTTAAATTGGT	9607	False	NA	NA	False	ATTAAA	-25	NA	121849541	121848846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_121848800_121849500
Isoform_60107_11	chr5	+	1088	1	NIC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	7	-5456	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGGAAAAGAAAAAAA	757	False	NA	NA	False	NA	NA	NA	122492509	122493597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_122492500_122493600
Isoform_6011_4	chr11	-	1471	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	20	1208	20	-1	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGCCCCCATTGACA	7620	False	NA	NA	False	NA	NA	NA	70350790	70346016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
Isoform_60114_3	chr5	+	922	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTTAAAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	122640507	122641429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_122640500_122641400
Isoform_60117_4	chr5	+	769	1	FSM	ENSMUSG00000029440.16	ENSMUST00000196137.2	774	1	-6	11	-6	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366314	123367083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_123366300_123367100
Isoform_6012_12	chr11	-	1776	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	95	-160	15	160	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70537789	70534861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_60120_4	chr5	+	2884	1	NIC	ENSMUSG00000029438.10	novel	4161	8	NA	NA	6	-12941	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAATTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	123482516	123485400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_123482500_123485400
Isoform_60121_5	chr5	+	175	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	163	False	NA	NA	False	NA	NA	NA	123809804	123809979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_123809800_123810000
Isoform_60123_9	chr5	-	170	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	4122	False	NA	NA	False	NA	NA	NA	123861382	123861212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_123861200_123861400
Isoform_60124_13	chr5	-	1404	1	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	-4409	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	4354	False	NA	NA	False	NA	NA	NA	123887444	123886040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_123886000_123887400
Isoform_60125_10	chr5	+	540	1	NIC	ENSMUSG00000029414.12	novel	347	2	NA	NA	0	-3795	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123887788	123888328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_123887800_123888300
Isoform_60126_6	chr5	+	174	1	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTATGTTTATAT	1230	False	NA	6	True	NA	NA	NA	24366044	24366218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_24366000_24366200
Isoform_60127_9	chr5	+	2094	1	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254165	124256259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_124254200_124256300
Isoform_60129_4	chr5	+	373	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124347153	124347526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_124347200_124347500
Isoform_6013_310	chr11	-	1633	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	74	4	-6	-4	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTGTGTAAAGTCGT	NA	False	NA	-4	True	ATTAAA	-24	NA	70537810	70535025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_60130_3	chr5	-	3795	1	ISM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	53417	1	12312	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124510560	124506765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124506800_124510600
Isoform_60131_3	chr5	-	2470	1	ISM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	54741	2	13636	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGGTGTTGTGGTTT	NA	False	NA	47	True	AATAAA	-19	NA	124509236	124506766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_124506800_124509200
Isoform_60132_3	chr5	-	173	1	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAAGAAAACC	5528	False	NA	NA	False	NA	NA	NA	124573561	124573388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_124573400_124573600
Isoform_60133_5	chr5	-	807	1	ISM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	7164	3	769	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTTATTTTGGATTTT	NA	False	NA	49	True	ATTAAA	-14	NA	3690770	3689963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_3690000_3690800
Isoform_60134_4	chr5	-	199	1	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTGTGGTGATAGAA	NA	False	NA	NA	False	NA	NA	NA	124579610	124579411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_124579400_124579600
Isoform_60135_3	chr5	-	262	1	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCGTCTCATACCTAT	NA	False	NA	NA	False	AATAAA	-30	NA	124581998	124581736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_124581700_124582000
Isoform_60136_18	chr5	+	194	1	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATAGCACCATGCCCAG	NA	False	NA	NA	False	NA	NA	NA	124677686	124677880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_124677700_124677900
Isoform_60137_21	chr5	+	966	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	-561	20	80	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124678837	124679803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_124678800_124679800
Isoform_60139_5	chr5	-	340	2	Antisense	novelGene_ENSMUSG00000118662.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124749011	124748640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_124748668_124748698
Isoform_60140_5	chrX	+	183	1	Intergenic	novelGene_2161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57017778	57017961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_57017800_57018000
Isoform_60141_34	chr5	-	211	1	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATTTTGTGCTGTT	NA	False	NA	-2	True	TTTAAA	-11	NA	125443060	125442849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_125442800_125443100
Isoform_60142_3	chr5	-	172	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	125655240	125655068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_125655100_125655200
Isoform_60148_395	chr5	+	3262	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-7	-5	-7	5	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCACTGTGCATTGGTGA	NA	False	NA	19	True	AATAAA	-22	NA	128677900	128681162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_128677900_128681200
Isoform_60158_291	chr5	-	523	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	-24	-58	-24	58	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129205605	129205082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129205100_129205600
Isoform_60164_22	chr5	+	3384	1	FSM	ENSMUSG00000029439.15	ENSMUST00000199887.2	3398	1	0	14	0	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTGAAA	NA	False	NA	NA	False	AATAGA	-36	NA	129578309	129581693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_129578300_129581700
Isoform_60167_4	chr5	-	943	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	-23	-38	-23	38	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAGAATTA	4018	False	NA	NA	False	AATAAA	-15	NA	129700958	129700015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129700000_129701000
Isoform_60168_3	chr5	+	634	1	ISM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	32553	78	4386	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGATGTCTAATTTTTA	NA	False	NA	11	True	AATAAA	-17	NA	129834679	129835313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_129834700_129835300
Isoform_6017_51	chr11	-	1674	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	33	4	33	-4	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTGTGTAAAGTCGT	NA	False	NA	-4	True	ATTAAA	-24	NA	70537851	70535025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
Isoform_60170_3	chr9	-	185	1	FSM	ENSMUSG00000098893.2	ENSMUST00000183380.2	799	1	792	-178	792	178	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	72199830	72199645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72199600_72199800
Isoform_60174_4	chr5	-	184	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200832.2	2119	1	647	1288	647	-1288	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	129900171	129899987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_129900000_129900200
Isoform_60176_6	chr5	+	173	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	3788	False	NA	NA	False	NA	NA	NA	113949313	113949486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_113949300_113949500
Isoform_60177_3	chr5	-	163	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	129921627	129921464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_129921500_129921600
Isoform_60178_9	chr5	+	211	1	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129967430	129967641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_129967400_129967600
Isoform_60179_10	chr6	-	178	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534392	120534214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_120534200_120534400
Isoform_60180_6	chr5	-	2069	1	FSM	ENSMUSG00000029673.20	ENSMUST00000198165.2	3695	1	-737	2363	-55	-2363	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATTAGGGA	NA	False	NA	NA	False	NA	NA	NA	131567581	131565512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_131565500_131567600
Isoform_60182_30	chr5	+	487	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	-21	-52	-21	52	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	133503940	133504427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_133503900_133504400
Isoform_60183_10	chr5	-	2999	2	Genic_Genomic	ENSMUSG00000061979.9	novel	2321	11	NA	NA	13	-8889	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	134205600	134202573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_134204870_134204897
Isoform_60184_4	chr5	-	1847	1	Antisense	novelGene_ENSMUSG00000015942.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAAAAAAGGCCC	8859	False	NA	NA	False	NA	NA	NA	134213250	134211403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_134211400_134213200
Isoform_60188_4	chr5	+	199	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTACTTTATAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	134356578	134356777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_134356600_134356800
Isoform_60195_696	chr5	-	1803	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	7	6	7	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTGGGCTGTTCTCTA	NA	False	NA	-15	True	AATAAA	-19	NA	134975781	134973978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_134974000_134975800
Isoform_60204_4	chr5	+	1478	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	-220	1	-220	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCGCTGGAGCTTCCTTA	4821	False	NA	37	True	AATAAA	-17	NA	135014847	135016325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135014800_135016300
Isoform_60206_41	chr5	+	1247	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	13	-1	13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGGAGCTTCCTTATC	5054	False	NA	39	True	AATAAA	-19	NA	135015080	135016327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135015100_135016300
Isoform_60209_3	chr5	+	396	1	NIC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	1323	-2623	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7205	False	NA	NA	False	NA	NA	NA	135071442	135071838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135071400_135071800
Isoform_6021_80	chr11	-	2223	2	ISM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	9	-2	9	2	intron_retention	FALSE	canonical	3	10036	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGTTGGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	70545461	70542673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_70543048_70543612
Isoform_60210_91	chr5	+	1125	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	40	496	40	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAATTTGTTTTTCTGTG	3172	False	NA	51	True	AAAAAG	-22	NA	135093095	135094220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135093100_135094200
Isoform_60211_21	chr5	+	1356	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	40	265	40	-265	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAC	3172	False	NA	NA	False	NA	NA	NA	135093095	135094451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_135093100_135094500
Isoform_60213_3	chr5	-	1960	1	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-13	-4163	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7008	False	NA	NA	False	NA	NA	NA	24806987	24805027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_24805000_24807000
Isoform_60214_3	chr5	-	177	1	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	135232245	135232068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_135232100_135232200
Isoform_60217_5	chr5	-	3154	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-5	-856	-5	856	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGATAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	135280089	135276935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135276900_135280100
Isoform_60218_189	chr5	-	2300	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-6	-1	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTTCTATCTGGGC	NA	False	NA	-1	True	AATAAA	-14	NA	135280090	135277790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135277800_135280100
Isoform_60219_7	chr5	-	1272	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-38	1059	-38	-1059	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGGGCCACGAGGCC	NA	False	NA	NA	False	NA	NA	NA	135280122	135278850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_135278800_135280100
Isoform_60220_11	chr5	-	175	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	135311351	135311176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_135311200_135311400
Isoform_60221_6	chr5	+	1802	1	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	-12	-1122	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	135661545	135663347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_135661500_135663300
Isoform_60222_37	chr5	+	183	1	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5674	False	NA	NA	False	NA	NA	NA	135721662	135721845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_135721700_135721800
Isoform_60223_6	chr5	-	2679	1	NIC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-45	-4367	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	5258	False	NA	NA	False	NA	NA	NA	135773107	135770428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_135770400_135773100
Isoform_6023_2621	chr11	-	854	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	9	-2	9	2	multi-exon	FALSE	canonical	3	9692	junction_2	172	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGTTGGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	70545461	70542673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70543048_70543612_70543806_70545174
Isoform_60240_7	chr5	+	2531	1	Antisense	novelGene_ENSMUSG00000051391.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGACTGCAGTAG	2158	False	NA	NA	False	NA	NA	NA	135937262	135939793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_+_135937300_135939800
Isoform_60251_4	chr5	+	4243	1	NIC	ENSMUSG00000039771.14	novel	900	3	NA	NA	-1	-1780	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAATTTAAAAAAAAAAAA	9282	False	NA	NA	False	NA	NA	NA	136145554	136149797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_136145600_136149800
Isoform_60253_3	chr5	-	176	1	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	136636828	136636652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_136636700_136636800
Isoform_60255_13	chr5	+	1883	1	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAAAACCTTC	2031	False	NA	NA	False	NA	NA	NA	136969966	136971849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_136970000_136971800
Isoform_60256_12	chr5	+	1039	1	FSM	ENSMUSG00000051502.8	ENSMUST00000052825.7	1037	1	-4	2	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGCCCAGCCTGTGT	1540	False	NA	5	True	NA	NA	NA	137292886	137293925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137292900_137293900
Isoform_60258_9	chr5	-	987	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	0	1	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1732	False	NA	-33	True	AATAAA	-19	NA	137500687	137499700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_137499700_137500700
Isoform_60260_3	chr5	+	1351	1	FSM	ENSMUSG00000105851.2	ENSMUST00000197965.2	956	1	-435	40	-435	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCAAATAAATAGACTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	137500499	137501850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_137500500_137501800
Isoform_60262_5	chr5	+	684	1	ISM	ENSMUSG00000029714.12	ENSMUST00000031727.10	5440	24	8372	2	8372	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	8042	False	NA	27	True	AATAAA	-22	NA	137525511	137526195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_137525500_137526200
Isoform_60263_3	chr5	+	694	1	Antisense	novelGene_ENSMUSG00000037221.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	137595199	137595893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_+_137595200_137595900
Isoform_60264_3	chr5	+	178	1	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCAAATATACC	NA	False	NA	NA	False	NA	NA	NA	137677393	137677571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_137677400_137677600
Isoform_60270_3	chr5	-	184	1	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	137769825	137769641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_137769600_137769800
Isoform_60271_24	chr5	+	1177	1	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	26	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCGAACTGTTCTT	NA	False	NA	1	True	AATAAA	-14	NA	137777191	137778368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_137777200_137778400
Isoform_60272_6	chr5	+	201	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTCTCTCCGAGGCAG	9755	False	NA	NA	False	NA	NA	NA	24995606	24995807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_24995600_24995800
Isoform_60273_5	chr5	+	173	1	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTTCCCTTAAAA	4445	False	NA	NA	False	NA	NA	NA	138108182	138108355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_138108200_138108400
Isoform_60274_7	chr5	-	175	1	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAGAAAA	1016	False	NA	NA	False	NA	NA	NA	138154701	138154526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_138154500_138154700
Isoform_60276_4	chr5	+	2255	1	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	51	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAAAATAACA	8194	False	NA	NA	False	NA	NA	NA	138170380	138172635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_138170400_138172600
Isoform_60277_8	chr5	+	1313	1	FSM	ENSMUSG00000049285.5	ENSMUST00000057773.5	1308	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCCTGATGTAAATGC	5026	False	NA	NA	False	AATAAA	-17	NA	138192570	138193883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138192600_138193900
Isoform_60279_166	chr5	-	2335	1	FSM	ENSMUSG00000080935.4	ENSMUST00000121655.2	1293	1	-54	-988	-54	988	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCCAGAAAAAAAAAAAAAAG	1741	False	NA	NA	False	AATAAA	-12	NA	138363868	138361533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_138361500_138363900
Isoform_6028_30	chr11	-	1260	3	FSM	ENSMUSG00000018293.5_ENSMUSG00000087523.2	ENSMUST00000018437.3	861	3	-397	-2	-397	2	multi-exon	FALSE	canonical	3	9692	junction_2	172	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGTTGGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	70545867	70542673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70543048_70543612_70543806_70545174
Isoform_60281_92	chr5	+	401	1	FSM	ENSMUSG00000046440.10	ENSMUST00000034916.10	967	1	-77	643	-77	-643	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAGAACAAGCAG	NA	False	NA	NA	False	NA	NA	NA	138502997	138503398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_138503000_138503400
Isoform_60283_4	chr5	-	4113	1	NIC	ENSMUSG00000053581.14	novel	3169	7	NA	NA	-13	-1288	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8749	False	NA	NA	False	NA	NA	NA	139470232	139466119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_139466100_139470200
Isoform_60284_6	chr5	-	302	1	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	139966591	139966289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_139966300_139966600
Isoform_60285_4	chr5	+	177	1	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	140380790	140380967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_140380800_140381000
Isoform_60288_3	chr5	+	898	1	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCAATTTGGTATGGCC	NA	False	NA	NA	False	NA	NA	NA	142353538	142354436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_142353500_142354400
Isoform_60289_3	chr5	-	2332	1	FSM	ENSMUSG00000074817.3	ENSMUST00000099400.3	4239	1	-2	1909	-2	-1909	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATCTCAAAGGCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	142515833	142513501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_142513500_142515800
Isoform_60296_3	chr5	+	601	1	Antisense	novelGene_ENSMUSG00000029580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	142892041	142892642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_+_142892000_142892600
Isoform_60297_18	chr5	+	178	1	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	142920019	142920197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_142920000_142920200
Isoform_603_6	SIRV8002	+	1247	1	FSM	SIRV8002A	SIRV8002	8000	1	6753	0	6753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	6753	8000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8002_+_6800_8000
Isoform_60304_6	chr5	-	408	1	Antisense	novelGene_ENSMUSG00000029581.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAATACT	NA	False	NA	NA	False	NA	NA	NA	142958940	142958532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_142958500_142958900
Isoform_60305_3	chr5	-	171	1	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143091356	143091185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_143091200_143091400
Isoform_60307_4	chr5	-	176	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143784187	143784011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_143784000_143784200
Isoform_60308_7	chr5	+	1550	1	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	2	-1910	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	143846818	143848368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_143846800_143848400
Isoform_60309_5	chr5	+	1206	1	Genic_Genomic	ENSMUSG00000038970.8	novel	NA	NA	NA	NA	-65	-86628	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAAATCTAGGCT	NA	False	NA	NA	False	AATAAA	-37	NA	144037188	144038394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_144037200_144038400
Isoform_60310_3	chr5	+	1444	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGAAGGAAGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	144616021	144617465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_144616000_144617500
Isoform_60311_4	chr5	-	227	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCTGGTGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	144656465	144656238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_144656200_144656500
Isoform_60312_6	chr5	-	181	1	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAATCTATCA	NA	False	NA	NA	False	NA	NA	NA	144661380	144661199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_144661200_144661400
Isoform_60315_6	chr5	+	2018	1	Genic_Genomic	ENSMUSG00000000600.16	novel	NA	NA	NA	NA	-10	-4518	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATACCTTTAGT	7975	False	NA	NA	False	NA	NA	NA	3853173	3855191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_3853200_3855200
Isoform_60316_3	chr5	+	917	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-162	699	-162	-699	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTGTATAGCCTTT	NA	False	NA	NA	False	TATAAA	-14	NA	25734848	25735765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25734800_25735800
Isoform_60317_3	chr5	+	782	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-27	699	-27	-699	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTGTATAGCCTTT	NA	False	NA	NA	False	TATAAA	-14	NA	25734983	25735765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_25735000_25735800
Isoform_6032_194	chr11	-	1016	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	126	17	0	-17	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGACTTGTACCTGGA	NA	False	NA	-26	True	AATAAA	-16	NA	70560116	70554613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
Isoform_60321_4	chr5	-	894	1	FSM	ENSMUSG00000029627.13	ENSMUST00000198959.2	2243	1	13	1336	2	-1336	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACTGGTTTTGAGATA	1604	False	NA	-5	True	AATAAA	-13	NA	145138665	145137771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_145137800_145138700
Isoform_60322_3	chr5	+	178	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCTTTAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	25747677	25747855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_25747700_25747900
Isoform_60326_4	chr5	+	1507	1	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	256	-81509	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCATGAAATATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146322050	146323557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_146322000_146323600
Isoform_60327_3	chr5	-	983	1	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146769667	146768684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_146768700_146769700
Isoform_60329_11	chr5	-	170	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146854589	146854419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_146854400_146854600
Isoform_60332_5	chr5	+	186	1	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	147334090	147334276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_147334100_147334300
Isoform_60334_6	chr5	-	1241	1	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	71253	1	14078	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTGTGGTCTCAAG	NA	False	NA	-4	True	AATAAA	-19	NA	148265461	148264220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_-_148264200_148265500
Isoform_60337_4	chr5	-	946	1	NIC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-46	-7475	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACTAAAAAA	5485	False	NA	NA	False	NA	NA	NA	148336647	148335701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_148335700_148336600
Isoform_6034_15	chr11	-	2415	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-5	-21	0	1	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGACTTTGCTTTAC	NA	False	NA	-8	True	AATAAA	-40	NA	70860785	70833906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_60342_9	chr5	-	221	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATAAGAAGTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	149078142	149077921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_149077900_149078100
Isoform_60345_3	chr5	-	199	1	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCCTCCACAACCCTC	NA	False	NA	NA	False	NA	NA	NA	149563512	149563313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_149563300_149563500
Isoform_60348_5	chr5	-	3073	1	FSM	ENSMUSG00000002221.12	ENSMUST00000199714.2	3829	1	-1042	1798	-20	-1798	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGAAATTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	27996413	27993340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_27993300_27996400
Isoform_60349_3	chr5	+	978	1	Antisense	novelGene_ENSMUSG00000002221.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGGAGTTTTCCCTGC	1675	False	NA	NA	False	AATAAA	-17	NA	27996146	27997124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_+_27996100_27997100
Isoform_6035_11	chr11	-	2430	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	14	9	0	1	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGACTTTGCTTTAC	NA	False	NA	-8	True	AATAAA	-40	NA	70860785	70833906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
Isoform_60350_3	chr5	+	287	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	150870999	150871286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_150871000_150871300
Isoform_60351_4	chr5	+	857	1	Genic_Genomic	ENSMUSG00000048271.15	novel	NA	NA	NA	NA	7725	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAGAGTTTATTTTC	NA	False	NA	7	True	AATAAA	-19	NA	28623383	28624240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_28623400_28624200
Isoform_60354_10	chr5	+	417	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	-17	38	-17	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAGGAAGAAACGATC	NA	False	NA	NA	False	NA	NA	NA	3286413	3286830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_3286400_3286800
Isoform_60357_23	chr5	+	176	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATACAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	29902754	29902930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_29902800_29902900
Isoform_60359_5	chr5	+	175	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTTTAAAAAGAGAGA	NA	False	NA	2	True	NA	NA	NA	31067427	31067602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_31067400_31067600
Isoform_60360_3	chr5	+	1231	1	Genic_Genomic	ENSMUSG00000006638.16	novel	NA	NA	NA	NA	-14	-3807	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	31107395	31108626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_31107400_31108600
Isoform_60361_7	chr5	-	736	1	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-2	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAACAAAAAAACAAAAA	NA	False	NA	NA	False	AATACA	-27	NA	31117626	31116890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_31116900_31117600
Isoform_60362_4	chr8	+	174	1	Intergenic	novelGene_1942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAATCAAAACC	NA	False	NA	NA	False	NA	NA	NA	89661697	89661871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_89661700_89661900
Isoform_60366_16	chr5	+	2172	1	FSM	ENSMUSG00000062761.8	ENSMUST00000201859.2	3522	1	-44	1394	1	1182	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAAATAC	7147	False	NA	NA	False	NA	NA	NA	31609779	31611951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31609800_31612000
Isoform_60368_3	chr5	+	227	1	FSM	ENSMUSG00000029138.5	ENSMUST00000202441.2	2737	1	1141	1369	1022	-1369	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATTCAGTTCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	31644224	31644451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_31644200_31644500
Isoform_60371_3	chr5	-	2616	1	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31754178	31751562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_31751600_31754200
Isoform_60373_10	chr5	+	2780	1	FSM	ENSMUSG00000014932.16	ENSMUST00000200779.2	2749	1	-38	7	-11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTAATAAAAAAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	32768503	32771283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_32768500_32771300
Isoform_60375_3	chr5	-	1491	1	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	-2	-19918	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAACAACAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	32942985	32941494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_32941500_32943000
Isoform_60376_13	chr5	-	1658	1	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-5	-16968	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	7066	False	NA	NA	False	NA	NA	NA	33011587	33009929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33009900_33011600
Isoform_60377_5	chr7	-	178	1	ISM	ENSMUSG00000015134.16	ENSMUST00000174209.8	1496	7	17891	10	-2696	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAGACTCTG	NA	False	NA	NA	False	NA	NA	NA	66058446	66058268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_66058300_66058400
Isoform_60378_5	chr5	-	174	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATGCACTAT	NA	False	NA	-2	True	NA	NA	NA	33191145	33190971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_33191000_33191100
Isoform_60380_5	chr5	-	348	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	33802560	33802212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_33802200_33802600
Isoform_60381_8	chr5	-	2402	1	NIC	ENSMUSG00000004642.14	novel	1027	8	NA	NA	-14	1706	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	33809664	33807262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_33807300_33809700
Isoform_60382_6	chr5	-	173	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	33868743	33868570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_33868600_33868700
Isoform_60390_5	chr5	-	459	1	Antisense	novelGene_ENSMUSG00000029110.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAACCTATTAC	3160	False	NA	NA	False	NA	NA	NA	34510778	34510319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr5_-_34510300_34510800
Isoform_60391_16	chr9	+	199	1	Intergenic	novelGene_2106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATTGGTGGACTAGT	9064	False	NA	NA	False	NA	NA	NA	109905503	109905702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_109905500_109905700
Isoform_60392_14892	chr5	-	2105	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	-78	-86	-78	86	mono-exon	FALSE	NA	NA	NA	NA	NA	14892	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	6	True	AATAAA	-20	NA	5833633	5831528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_5831500_5833600
Isoform_6040_5610	chr11	-	1130	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	32	13	13	-1	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	5610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAAAGTTGAGGTTCTT	NA	False	NA	37	True	AATAAA	-19	NA	70873820	70868674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
Isoform_60420_19	chr5	+	190	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATACTACTTTTTC	NA	False	NA	NA	False	NA	NA	NA	34738580	34738770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_34738600_34738800
Isoform_60421_6	chr5	-	3498	1	FSM	ENSMUSG00000001082.13	ENSMUST00000200717.2	414	1	-1645	-1439	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794490	34790992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_34791000_34794500
Isoform_60423_5	chr5	+	2719	1	FSM	ENSMUSG00000045318.7	ENSMUST00000049545.7	3445	1	724	2	724	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCAGGTGCATTGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	35436386	35439105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_35436400_35439100
Isoform_60424_5	chr5	-	3878	1	Genic_Genomic	ENSMUSG00000036553.17	novel	NA	NA	NA	NA	-46	-13088	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35897377	35893499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_35893500_35897400
Isoform_60426_20	chr5	-	2684	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAGGAAAAAATAGAG	NA	False	NA	NA	False	NA	NA	NA	7485438	7482754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_7482800_7485400
Isoform_60429_16	chr10	+	214	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCAACCAAACTTTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	12658744	12658958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_12658700_12659000
Isoform_60430_28	chr5	-	1284	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-10	-1	-10	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTCCTTCTGGAGATT	NA	False	NA	-3	True	ATTAAA	-20	NA	36906004	36904720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36904700_36906000
Isoform_60431_61	chr5	-	1014	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-4	263	-4	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGGTTCAGTTTTCTG	NA	False	NA	-2	True	ATTAAA	-19	NA	36905998	36904984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_36905000_36906000
Isoform_60435_3	chr6	+	199	1	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCAGTAACTCCAC	NA	False	NA	NA	False	NA	NA	NA	136343647	136343846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_136343600_136343800
Isoform_60436_6	chr5	-	3938	2	NNC	ENSMUSG00000005103.13	novel	353	2	NA	NA	-23	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38718941	38714983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr5_-_38716326_38716345
Isoform_60437_5	chr5	-	4057	1	FSM	ENSMUSG00000005103.13	ENSMUST00000202199.2	3909	1	-154	6	-62	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38719040	38714983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_38715000_38719000
Isoform_60439_4	chr5	-	5300	1	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-26	-4857	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38842126	38836826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_38836800_38842100
Isoform_60440_6	chr11	+	148	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	-24	689	-24	-689	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCGAAGGAATTTCGCA	NA	False	NA	NA	False	AAAAAG	-29	NA	46618620	46618768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46618600_46618800
Isoform_60442_23	chr5	-	2342	1	NIC	ENSMUSG00000039753.17	novel	2801	11	NA	NA	-4	-11663	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8865	False	NA	NA	False	AATAAA	-24	NA	43939455	43937113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_43937100_43939500
Isoform_60443_3	chr5	+	886	1	FSM	ENSMUSG00000029084.6	ENSMUST00000196600.2	881	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAAAAAACAAGCC	NA	False	NA	NA	False	NA	NA	NA	44026199	44027085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_44026200_44027100
Isoform_60444_75	chr5	+	744	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	6	24	3	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGCAAAAAACAAAACAAA	NA	False	NA	NA	False	AATAAA	-12	NA	44070491	44071235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_44070500_44071200
Isoform_60445_3	chr5	+	1636	1	NIC	ENSMUSG00000104784.2	novel	987	2	NA	NA	214	-15112	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATTGTGGAAAGACCTG	NA	False	NA	NA	False	NA	NA	NA	44384142	44385778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_44384100_44385800
Isoform_60448_7	chr5	+	1328	1	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-3	-13169	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52991464	52992792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_52991500_52992800
Isoform_60449_17	chr5	+	2107	1	FSM	ENSMUSG00000061461.12	ENSMUST00000204839.2	2076	1	-30	-1	-17	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	3429	False	NA	NA	False	NA	NA	NA	53424501	53426608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_53424500_53426600
Isoform_60451_3	chr5	+	1676	1	NIC	ENSMUSG00000028970.10	novel	3181	22	NA	NA	0	-13829	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8848146	8849822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_8848100_8849800
Isoform_60455_20	chr5	+	175	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGGA	3956	False	NA	NA	False	NA	NA	NA	65582968	65583143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_65583000_65583100
Isoform_60458_8	chr5	-	175	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGTTAGGA	5107	False	NA	NA	False	NA	NA	NA	65747056	65746881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_65746900_65747100
Isoform_60459_5	chr5	-	194	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGCAAGCTTTAAAAAAA	4966	False	NA	NA	False	NA	NA	NA	65924285	65924091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_65924100_65924300
Isoform_60460_12	chr5	-	177	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATGGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	66366389	66366212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_66366200_66366400
Isoform_60461_8	chr15	-	177	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35363508	35363331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_-_35363300_35363500
Isoform_60462_4	chr5	-	173	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	66398820	66398647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_66398600_66398800
Isoform_60463_3	chr5	-	185	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGCAGCTACTATA	9643	False	NA	-2	True	NA	NA	NA	66407219	66407034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_66407000_66407200
Isoform_60464_9	chr5	-	923	1	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	-1	-77058	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	AAAACA	-40	NA	66776025	66775102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_-_66775100_66776000
Isoform_60465_3	chr5	-	1063	1	Genic_Genomic	ENSMUSG00000029207.17	novel	NA	NA	NA	NA	-38	-77058	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAGCTGGAG	NA	False	NA	NA	False	AAAACA	-40	NA	66776165	66775102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_66775100_66776200
Isoform_60466_5	chr5	+	2772	1	NIC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	1	-4156	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	8033	False	NA	NA	False	NA	NA	NA	67621246	67624018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_67621200_67624000
Isoform_60469_15	chr5	-	231	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGGAGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	73637283	73637052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_73637100_73637300
Isoform_60470_11	chr5	+	1990	1	NIC	ENSMUSG00000106968.2	novel	848	2	NA	NA	1	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAAAAAAAAAGAGT	NA	False	NA	NA	False	AATGAA	-21	NA	74103724	74105714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_74103700_74105700
Isoform_60471_4	chr5	+	500	1	ISM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	178828	7788	51772	995	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	1036	False	NA	NA	False	GATAAA	-34	NA	3572720	3573220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_3572700_3573200
Isoform_60472_13	chr5	+	1219	1	FSM	ENSMUSG00000093355.3	ENSMUST00000175614.3	121	1	-411	-687	-411	687	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_74253800_74255000
Isoform_60473_6	chr5	+	3687	1	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	-42269	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACGTAG	805	False	NA	NA	False	NA	NA	NA	75735653	75739340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_75735700_75739300
Isoform_60478_15	chr5	+	934	1	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-16	-12120	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	590	False	NA	NA	False	NA	NA	NA	76331780	76332714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_76331800_76332700
Isoform_60479_65	chr5	-	1195	1	FSM	ENSMUSG00000106831.2	ENSMUST00000201768.2	459	1	-35	-701	-35	701	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-19	NA	76380952	76379757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_76379800_76381000
Isoform_60481_129	chr5	-	210	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76794784	76794574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_76794600_76794800
Isoform_60484_7	chr5	-	178	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATACAG	NA	False	NA	NA	False	NA	NA	NA	77289911	77289733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_77289700_77289900
Isoform_60485_3	chr5	+	1634	1	Genic_Genomic	ENSMUSG00000029249.16	novel	NA	NA	NA	NA	18605	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTTTGTTTATTATTGG	NA	False	NA	16	True	AATAAA	-16	NA	77432647	77434281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_+_77432600_77434300
Isoform_60486_3	chr5	+	667	1	ISM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	20268	7	19563	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATCGGACCTTTGTT	NA	False	NA	7	True	AATAAA	-7	NA	77433605	77434272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr5_+_77433600_77434300
Isoform_60487_7	chr5	+	174	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	77448094	77448268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_77448100_77448300
Isoform_60488_5	chr5	-	228	1	Genic_Genomic	ENSMUSG00000036285.11	novel	NA	NA	NA	NA	765	56	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTTTTTTTTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	77451397	77451169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr5_-_77451200_77451400
Isoform_60489_4	chr5	-	217	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTTAATTGGAGCCA	NA	False	NA	NA	False	ACTAAA	-6	NA	77471247	77471030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_77471000_77471200
Isoform_60490_4	chrX	+	171	1	Intergenic	novelGene_2168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72896633	72896804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_72896600_72896800
Isoform_60493_8	chr5	+	1067	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	3	-791	3	791	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCTTGGGAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	84271174	84272241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_84271200_84272200
Isoform_60494_6	chr5	-	177	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	8426	False	NA	NA	False	NA	NA	NA	9153301	9153124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_9153100_9153300
Isoform_60497_12	chr5	+	1620	1	NIC	ENSMUSG00000035851.15	novel	3222	16	NA	NA	-4	-3897	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTG	NA	False	NA	NA	False	AATAAA	-31	NA	86952087	86953707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr5_+_86952100_86953700
Isoform_60498_41	chr6	-	1478	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	33	5	-9	-5	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTTGTGTGTTCTT	-2	True	NA	-5	True	ATTAAA	-17	NA	4086939	4076903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
Isoform_60500_5	chr6	-	1605	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	88	3	0	1	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTGGTAAAATTTCT	-17	True	NA	NA	False	AATAAA	-33	NA	4747116	4674352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
Isoform_60501_4	chr6	-	1125	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	53	659	0	-659	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGGAACTGTAATTATT	19	True	NA	NA	False	AGTAAA	-17	NA	5256233	5221510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
Isoform_60502_3	chr6	-	1805	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	33	-1	-18	1	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAAAAAAAATATATGC	-1	True	NA	NA	False	AATAAA	-44	NA	5256253	5220850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
Isoform_60503_3	chr6	-	845	7	NIC	ENSMUSG00000029759.10	novel	1837	9	NA	NA	-11	-659	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	15.5715195861619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGGAACTGTAATTATT	6	True	NA	NA	False	AGTAAA	-17	NA	5256246	5221510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5246277_5246334_5254515_5254587_5256152
Isoform_60504_3	chr6	-	767	3	ISM	ENSMUSG00000029759.10	ENSMUST00000156848.8	921	5	-23	9290	-2	-8847	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAGCAAAGAAAGA	15	True	NA	NA	False	TTTAAA	-37	NA	5256237	5245722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_5246334_5254515_5254587_5256152
Isoform_60506_27	chr6	-	3069	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	-2	0	-2	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	18	False	6217138	-3	True	AATAAA	-16	NA	6217120	6041217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_60507_8	chr6	-	3114	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	2	5	2	-5	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTATTGATTGCTTGCTC	NA	False	NA	-9	True	AATAAA	-10	NA	6217171	6041223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_60511_49	chr6	-	3083	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	1	True	NA	-3	True	AATAAA	-16	NA	6217137	6041217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_60512_121	chr6	-	3058	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	26	False	6217138	-3	True	AATAAA	-16	NA	6217112	6041217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_60514_11	chr6	-	3188	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6217243	6041218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_60517_11	chr6	-	2923	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	18	False	6217138	-3	True	AATAAA	-16	NA	6217120	6041217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
Isoform_60518_4	chr6	-	2968	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTATTGATTGCTTGCTC	NA	False	NA	-9	True	AATAAA	-10	NA	6217171	6041223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
Isoform_60519_7	chr6	-	2165	15	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	-2	170	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	178.774698593349	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTTATTGTTTATG	18	False	6217138	-2	True	AATAAA	-21	NA	6217120	6068096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_6068700_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
Isoform_6052_30	chr11	-	5208	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-27	3	-27	-3	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTGGTATCCAGCAT	NA	False	NA	-1	True	ATTAAA	-27	NA	70895290	70874919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
Isoform_60521_594	chr6	-	455	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	22	995	22	-995	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGGTTCAGATGTC	-3	True	NA	-13	True	AATAAA	-13	NA	6578636	6558288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_6558492_6560407_6560502_6578478
Isoform_6054_34	chr11	-	3613	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	51	2	-9	-2	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTATCTTGTATTTTT	NA	False	NA	-5	True	NA	NA	NA	70910078	70898269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
Isoform_6055_121	chr11	-	1126	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	55	2485	-5	6	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGCTTTCGTGTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	70910074	70900752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
Isoform_60554_11759	chr6	-	1954	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	2	45	-2	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	11759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCCTGGTTGTGGGT	5	True	NA	-11	True	AATAAA	-15	NA	7693209	7675170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
Isoform_60556_672	chr6	-	2392	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-436	45	436	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCCATAAAACTTCAT	5	True	NA	-23	True	NA	NA	NA	7693209	7674732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
Isoform_6056_48	chr11	-	615	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	550	-4	11	4	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTCCACTTTGATTTC	NA	False	NA	-1	True	AATAAA	-19	NA	72105868	72102545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
Isoform_6059_102	chr11	-	3269	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	55	5	-2	-5	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	-5	True	AATAAA	-18	NA	72157430	72132819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
Isoform_60597_329	chr6	-	626	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	44	0	11	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	-4	True	NA	-11	True	AATAAA	-14	NA	8259129	8255935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
Isoform_60599_17	chr6	-	1741	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	330	4	0	-4	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTATTCACTCCTGTT	-20	True	NA	-5	True	AATAAA	-31	NA	8778154	8630530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
Isoform_6060_23	chr11	-	3346	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	-24	7	-24	-7	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCTGGGTGCCTGGCC	NA	False	NA	-7	True	AATAAA	-16	NA	72157509	72132821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
Isoform_60602_2164	chr6	-	476	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	54	80	0	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	23	True	NA	-11	True	AATAAA	-15	NA	11907428	11900370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
Isoform_60603_233	chr6	-	517	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	13	80	13	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-18	True	NA	-11	True	AATAAA	-15	NA	11907469	11900370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
Isoform_60606_61	chr6	-	3901	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	76	610	3	-610	multi-exon	TRUE	canonical	3	155	junction_4	32.9194091684526	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTGCTTTTAGAG	7	True	NA	NA	False	ATTAAA	-16	NA	13608023	13581295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
Isoform_60609_7	chr6	-	3868	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	14	261	-14	-261	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	13677951	13625932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
Isoform_60610_10	chr6	-	2958	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	28	1157	0	-15	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGTCATAAGTAACTT	15	True	NA	-11	True	AATAAA	-13	NA	13677937	13626828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
Isoform_60615_32	chr6	-	1060	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	53	2064	0	1	multi-exon	FALSE	canonical	3	64	junction_2	22	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTTTTGGTCTGCTT	1	True	NA	NA	False	AATACA	-23	NA	13871464	13869797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_13870740_13871054_13871146_13871437
Isoform_60616_8	chr6	-	1726	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	5	5	5	-5	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGAAACTGTGCTCAT	-1	True	NA	NA	False	AATAAA	-19	NA	18109051	18050967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
Isoform_60617_29	chr6	-	2818	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	8	0	8	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	26	False	22356183	0	True	ATTAAA	-22	NA	22356157	22306518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_60618_12	chr6	-	2845	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	-1	True	NA	0	True	ATTAAA	-22	NA	22356184	22306518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_60619_84	chr6	-	1457	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	21	1348	21	14	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACAACAGTTTTTTTG	-23	True	NA	-7	True	AATAAA	-35	NA	22356144	22307866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_6062_16	chr11	-	1381	8	FSM	ENSMUSG00000020799.17	ENSMUST00000108503.9	1397	8	15	1	15	-1	multi-exon	FALSE	canonical	3	12	junction_6	18.5681315754731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72252684	72235548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310_72248477_72250504_72250712_72252618
Isoform_60620_28	chr6	-	1497	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-19	1348	-19	14	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACAACAGTTTTTTTG	-1	True	NA	-7	True	AATAAA	-35	NA	22356184	22307866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
Isoform_60622_4	chr6	-	2135	3	ISM	ENSMUSG00000029672.17	ENSMUST00000163371.8	775	10	-63	28112	30	-15149	5prime_fragment	FALSE	canonical	3	412	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	22356135	22337437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_22339377_22343264_22343319_22355993
Isoform_60625_403	chr6	-	419	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	457	-1	14	1	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCCATGTTATTGA	10	True	NA	-30	True	ATTAAA	-28	NA	24527555	24518663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
Isoform_60627_8	chr6	-	314	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	2	-1	2	1	multi-exon	FALSE	canonical	3	83	junction_2	1436.47492920072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCCATGTTATTGA	-2	True	NA	-30	True	ATTAAA	-28	NA	24527567	24518663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
Isoform_60629_17	chr6	-	908	6	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	5	12962	5	-104	5prime_fragment	FALSE	canonical	3	160	junction_2	27.1484806204694	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAGAAAGGAAAA	-4	True	NA	NA	False	AATAGA	-38	NA	24665003	24626765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
Isoform_6063_25	chr11	-	988	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4502	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.6320270880016	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72247620	72235548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247574
Isoform_60630_11	chr6	-	997	6	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	-84	12962	-84	-104	5prime_fragment	FALSE	canonical	3	160	junction_2	27.1484806204694	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAGAAAGGAAAA	NA	False	NA	NA	False	AATAGA	-38	NA	24665092	24626765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
Isoform_60634_195	chr6	-	2938	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	8	205	-2	-205	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	8	True	NA	-3	True	AATAAA	-17	NA	25809217	25743940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_60635_6	chr6	-	2963	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	-19	207	1	-207	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTCTGTGTGTG	6	False	NA	-5	True	AATAAA	-15	NA	25809244	25743942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_60636_4	chr6	-	3117	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	8	26	-2	-26	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTTGATGAATTTTC	8	True	NA	NA	False	AAAAAG	-15	NA	25809217	25743761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_60637_3	chr6	-	3345	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	17	-211	7	211	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAATGTCTACAAAAT	42	False	NA	NA	False	NA	NA	NA	25809208	25743524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_60639_49	chr6	-	2891	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-2	-205	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	31.693847983481	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	8	True	NA	-3	True	AATAAA	-17	NA	25809217	25743940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
Isoform_6064_4	chr11	-	984	5	NIC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	3626	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	17.4696164811939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72248496	72235548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_72235798_72236411_72236609_72242653_72242877_72246035_72246165_72248310
Isoform_60640_3	chr6	-	2663	16	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-2	-206	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	36.3894978744631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGTCTGTGTGTGT	8	True	NA	-4	True	AATAAA	-16	NA	25809217	25743941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25805873_25805941_25809173
Isoform_60641_4	chr6	-	2806	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-2	-206	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	35.6105233744184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGTCTGTGTGTGT	8	True	NA	-4	True	AATAAA	-16	NA	25809217	25743941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
Isoform_60642_39	chr6	-	4054	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	8	588	8	-588	multi-exon	FALSE	canonical	3	46	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-5	True	NA	0	True	ATTAAA	-15	NA	28421715	28416677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_28419300_28420283
Isoform_60643_5	chr6	-	4146	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	-7	511	-7	-511	multi-exon	FALSE	canonical	3	46	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATATAGTTCCTTATAT	-20	True	NA	77	True	AATAAA	-18	NA	28421730	28416600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_28419300_28420283
Isoform_60647_9	chr6	-	2651	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	306	1508	306	58	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGACTTTTTGGATG	-19	True	NA	-21	True	NA	NA	NA	29164699	29125082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_60648_74	chr6	-	2687	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	1444	334	122	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACCTTTTTAACATTT	9	True	NA	-21	True	AATATA	-27	NA	29164671	29125018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_60649_7	chr6	-	4154	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	313	-2	313	2	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	-12	True	NA	-2	True	NA	NA	NA	29164692	29123572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_6065_3	chr11	-	844	5	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4502	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.8518206354422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGCACAGAGCTCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	72247620	72235548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72246035_72246165_72247574
Isoform_60652_4	chr6	-	1815	8	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	313	30364	313	2740	5prime_fragment	FALSE	canonical	3	173	junction_1	20.2545031526124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAAATAAGTTAAAA	-12	True	NA	NA	False	NA	NA	NA	29164692	29153938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_60653_3	chr6	-	1957	7	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	311	2747	intron_retention	FALSE	canonical	3	179	junction_5	19.0416210794494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGTTAAAAAAAAAAC	-14	True	NA	NA	False	NA	NA	NA	29164694	29153931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
Isoform_60656_3	chr6	-	3482	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	-77	6	-77	-6	multi-exon	FALSE	canonical	3	12	junction_2	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGAGAATGTTCTGAC	NA	False	NA	NA	False	AATAAA	-8	NA	29179660	29169236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
Isoform_60657_122	chr6	-	2418	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	15	4	15	-3	multi-exon	FALSE	canonical	1	70	junction_10	46.9877234375763	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-16	True	NA	-5	True	AATAAA	-15	NA	29212281	29200439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
Isoform_60658_51	chr6	-	2552	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	44	4	11	-3	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-1	True	NA	-5	True	AATAAA	-15	NA	29216319	29200439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
Isoform_60660_36	chr6	-	2565	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	12	3	1	-3	multi-exon	FALSE	canonical	1	42	junction_14	63.7043554080817	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-11	True	NA	-5	True	AATAAA	-15	NA	29216329	29200439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
Isoform_60661_3	chr6	-	2466	14	FSM	ENSMUSG00000003500.14	ENSMUST00000162739.8	2471	14	3	2	3	1	multi-exon	TRUE	canonical	1	1	junction_13	73.8672245580225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGATCCTGTTTCTGTC	-9	True	NA	0	True	AATAAA	-20	NA	29216327	29200434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29216070
Isoform_60671_120	chr6	-	2989	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-9	1677	-9	-1677	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTTTGATATTGATGG	-6	True	NA	-2	True	AATAAA	-16	NA	30304547	30212964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
Isoform_60672_31	chr6	-	4647	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	8	2	-3	-2	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTGAACTTGATCTAT	11	True	NA	-4	True	AATAAA	-20	NA	30304530	30211289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
Isoform_60676_406	chr6	-	1807	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	13	4	0	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	4	True	NA	-11	True	AATAAA	-14	NA	30391009	30366382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
Isoform_60680_73	chr6	-	3411	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	68	6	0	-6	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCCTTGGTGAAATCA	5	True	NA	-15	True	AATAAA	-13	NA	30509714	30481232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_60681_365	chr6	-	2242	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	56	1187	-3	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	-7	True	NA	-18	True	ATTAAA	-16	NA	30509726	30482413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_60682_94	chr6	-	2272	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	70	1143	2	44	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAACTTTTGGGTTTT	7	True	NA	26	True	ATTAAA	-12	NA	30509712	30482369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_60684_17	chr6	-	2283	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	15	1187	15	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	NA	False	NA	-18	True	ATTAAA	-16	NA	30509767	30482413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
Isoform_60689_14	chr6	-	2276	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	-3	0	1	0	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	-1	True	NA	-18	True	ATTAAA	-16	NA	30509720	30482413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
Isoform_60693_14	chr6	-	3421	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	25	1	-24	-1	multi-exon	TRUE	canonical	3	75	junction_8	9.18095855561934	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCGTTTGCTATTAAT	-16	True	NA	-1	True	ATTAAA	-15	NA	30693723	30653456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
Isoform_60694_4	chr6	-	470	3	FSM	ENSMUSG00000029790.17	ENSMUST00000115130.3	485	3	-8	23	-8	-23	multi-exon	FALSE	canonical	2	5	junction_1	51	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAATATTTTAGACC	0	True	NA	NA	False	NA	NA	NA	30693707	30679109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30679444_30680129_30680194_30693635
Isoform_60695_7	chr6	-	3117	24	FSM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	42	-4	-4	4	multi-exon	FALSE	canonical	2	9	junction_2	47.3145369461355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTTGCTATACTTGAA	NA	False	NA	-10	True	AATAAA	-19	NA	30873687	30748406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30748987_30749404_30749501_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_60696_216	chr6	-	3122	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-12	851	-3	7	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873686	30748403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_60698_6	chr6	-	3989	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-27	-1	-2	1	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTGTTATTATGTTT	NA	False	NA	0	True	AATAAA	-17	NA	30873701	30747551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_6070_1555	chr11	-	2615	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	2	7	0	-7	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGATGACTTTGAGTGA	NA	False	NA	-8	True	GATAAA	-11	NA	72302537	72280946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
Isoform_60700_3	chr6	-	3051	23	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-4	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	50.0108252744153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873687	30748403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30871781_30871863_30872476_30872530_30873595
Isoform_60701_4	chr6	-	2666	20	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	1	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	50.8550708105575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTATACTTGAAATT	NA	False	NA	-7	True	AATAAA	-22	NA	30873644	30748403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
Isoform_60703_6	chr6	-	5321	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	50	8	50	-8	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGGTTCAGGCCCTAG	NA	False	NA	-7	True	AATAAA	-13	NA	31540866	31496430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
Isoform_60706_478	chr6	-	1515	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	26	9	2	-2	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGCATTTTCTGACTA	NA	False	NA	-19	True	AATAAA	-16	NA	33037169	32769160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
Isoform_60712_10	chr6	-	1399	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	-37	1	6	-1	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGAATTATTAGTTTCT	NA	False	NA	-13	True	AATAAA	-15	NA	33037189	32828378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
Isoform_60714_21	chr6	-	3751	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	135	2367	-6	976	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGAGCATATCGTTTG	NA	False	NA	-5	True	ATTAAA	-13	NA	34153911	34132681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_60716_88	chr6	-	3623	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	135	2495	-6	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153911	34132809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_60717_5	chr6	-	3741	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	10	2502	10	841	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATTTGTTTGTTTGT	NA	False	NA	-31	True	TATAAA	-12	NA	34154036	34132816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_60724_6	chr6	-	2803	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	75	3375	46	-32	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCCCAGGTTTGCAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	34153971	34133689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
Isoform_60725_10	chr6	-	1417	11	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	401.524955637878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGGTGGTGGTCCGT	NA	False	NA	-9	True	AATAAA	-12	NA	34294378	34280872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34293515_34293585_34294274
Isoform_60726_508	chr6	-	1351	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	35	1	-2	-1	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTGGTCCGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	34294378	34280869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
Isoform_60727_156	chr6	-	1383	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	3	1	3	-1	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTGGTCCGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	34294410	34280869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
Isoform_60729_16	chr6	-	1501	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	-13	1838	-13	17	multi-exon	FALSE	canonical	3	11	junction_1	4.92160768674447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATCCTGTTCACCTTCC	7584	False	NA	-3	True	NA	NA	NA	34855008	34850612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
Isoform_6073_43	chr11	-	3575	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	0	-3	0	3	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGTACTCATTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	72302537	72279986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
Isoform_60730_5	chr6	-	2323	3	NIC	ENSMUSG00000046806.14	novel	3326	4	NA	NA	0	11	intron_retention	FALSE	canonical	3	18	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTATTCAATCCTGTTCA	7597	False	NA	-9	True	NA	NA	NA	34854995	34850618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_34852548_34853473_34853707_34854834
Isoform_60732_13	chr6	-	2771	17	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.6000846808187	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5809	False	NA	-1	True	NA	NA	NA	34887778	34857360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_34857594_34857622_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
Isoform_60733_156	chr6	-	2644	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	38	0	-2	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5814	False	NA	-1	True	NA	NA	NA	34887773	34857360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
Isoform_60734_14	chr6	-	2698	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-64	-631	-64	-26	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	34965403	34922238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
Isoform_60736_4	chr6	-	2810	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-176	-631	-176	-26	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	34965515	34922238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
Isoform_60737_5	chr6	-	3492	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-15	-4	-10	-1	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7666	False	NA	-4	True	AATAAA	-18	NA	35110639	34999001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_60738_3	chr6	-	3243	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	9	44	0	-44	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAC	7655	False	NA	NA	False	AAAAAG	-25	NA	35110650	35021974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
Isoform_60740_7	chr6	-	3424	16	FSM	ENSMUSG00000029843.5	ENSMUST00000031868.5	3427	16	3	0	1	0	multi-exon	FALSE	canonical	2	6	junction_8	3.05213950460256	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAGTGAGGTCTACTC	NA	False	NA	NA	False	AATAAA	-16	NA	35285063	35244891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251976_35252575_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260255_35261564_35261605_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
Isoform_60741_46	chr6	-	3001	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	72	887	-17	-887	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGTACTATTTAACATC	4220	False	NA	-4	True	AATAAA	-21	NA	35516751	35486727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
Isoform_60745_21	chr6	-	3730	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	74	156	-15	-156	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTTAGCAACATATTT	4222	False	NA	-26	True	AATAAA	-20	NA	35516749	35485996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
Isoform_60753_4	chr6	-	1931	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	2	2027	2	-2027	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGATGGCCTACACT	4150	False	NA	-1	True	AATAAA	-22	NA	35516821	35487867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
Isoform_60754_104	chr6	-	3229	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-19	3872	-19	3165	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	37419100	37308061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_60756_6	chr6	-	3324	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	10	3748	10	3289	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTACACTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	37419071	37307937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
Isoform_60757_26	chr6	-	2626	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40994	3165	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	7978	False	NA	NA	False	ATTAAA	-20	NA	37354464	37308061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
Isoform_60758_3	chr6	-	2752	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40997	3289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	37.0248565155896	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTACACTTTGTAT	7975	False	NA	NA	False	NA	NA	NA	37354467	37307937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330560_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
Isoform_60759_11	chr6	-	3240	21	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12491	-3	127	3	3prime_fragment	FALSE	canonical	2	4	junction_15	2.50199920063936	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATGTCGTTATTCCAA	NA	False	NA	NA	False	NA	NA	NA	38073993	38025414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
Isoform_60760_5	chr6	-	1453	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-15	5098	-15	-5098	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATCTGTGCAGTATT	NA	False	NA	NA	False	NA	NA	NA	38276209	38269428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
Isoform_60761_8	chr6	-	2920	11	ISM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	-281	1003	49	-1003	5prime_fragment	TRUE	canonical	3	16	junction_1	23.6042369078096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATAATCAGACCTTGT	9713	False	NA	NA	False	GATAAA	-40	NA	38331489	38288524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_60763_30	chr6	-	3397	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	3	0	-3	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCAGTTGGATTTT	9664	False	NA	-6	True	NA	NA	NA	38331538	38292605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
Isoform_60767_28	chr6	-	2262	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	-23	37	-14	-37	multi-exon	TRUE	canonical	3	11	junction_3	4.14578098794425	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAGACTAGACCTTCAC	NA	False	NA	NA	False	AATAAA	-8	NA	38614191	38603631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
Isoform_60769_20	chr6	-	3419	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-185	-3	-185	3	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGAGTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	39095468	39063340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
Isoform_60771_6	chr6	-	3693	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-462	0	-462	0	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACTGGAGTTTATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	39095745	39063343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
Isoform_60775_5	chr6	-	3105	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	99.4312546157579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTTAAGCTTGACAT	NA	False	NA	-6	True	AATAAA	-27	NA	39354632	39312917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
Isoform_60776_7	chr6	-	2952	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCCCTGCTTAAGCTT	NA	False	NA	-11	True	AATAAA	-22	NA	39354624	39312922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
Isoform_60777_11	chr6	-	2966	17	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCCCTGCTTAAGCTT	NA	False	NA	-11	True	AATAAA	-22	NA	39354621	39312922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
Isoform_60778_8	chr6	-	4186	17	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGCCCTTAAGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	39354624	39311705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
Isoform_60780_80	chr6	-	2835	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-19	1214	-19	-1	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCTGCTTAAGCTTGA	NA	False	NA	-9	True	AATAAA	-24	NA	39354628	39312920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_60781_18	chr6	-	4043	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-12	-1	-12	1	multi-exon	TRUE	canonical	3	160	junction_14	38.6108925098626	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGCCCTTAAGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	39354621	39311705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_60782_12	chr6	-	2688	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-22	3	-19	1	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCCTGCTTAAGCTTG	NA	False	NA	-10	True	AATAAA	-23	NA	39354628	39312921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_60783_3	chr6	-	2184	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	293	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	90.4861949652539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACTGTATAATTAAAGA	NA	False	NA	3	True	AATAAA	-21	NA	39354624	39320550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
Isoform_60784_36	chr6	-	2105	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-19	8846	-19	291	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354628	39320552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_60785_3	chr6	-	1934	12	ISM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-3	7640	0	285	5prime_fragment	FALSE	canonical	3	31	junction_7	79.0636316598199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATATTTGACTGTATA	NA	False	NA	-5	True	AATAAA	-13	NA	39354609	39320558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
Isoform_60790_629	chr6	-	3015	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	16	15	16	-15	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTGGT	NA	False	NA	-11	True	AATAAA	-9	NA	39397380	39374752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
Isoform_60804_61	chr6	-	1583	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	-79	7	25	-7	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGAAGGAGTCTGTG	NA	False	NA	-12	True	AATAAA	-9	NA	39397371	39377700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
Isoform_6081_44	chr11	-	2358	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-8856	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	230.188204248176	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGATGACTTTGAGTGA	NA	False	NA	-8	True	GATAAA	-11	NA	72311395	72280946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72311055_72311162_72311290
Isoform_60814_946	chr6	-	886	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	-144	9	20	-9	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGAAGTGTCTCCGAA	NA	False	NA	-9	True	AATAAA	-16	NA	39397376	39382481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39382895_39387021_39387151_39397032
Isoform_60818_4	chr6	-	2455	11	FSM	ENSMUSG00000038456.10	ENSMUST00000149162.2	1702	11	126	-879	126	4	multi-exon	FALSE	canonical	3	101	junction_9	12.8953479984062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39465974	39439307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700
Isoform_60819_32	chr6	-	4325	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	147	-4	147	4	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534654	39439307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_60822_7	chr6	-	4470	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	3	-5	3	5	multi-exon	TRUE	canonical	3	100	junction_17	14.1962653756995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGTGAGTGTATAATAT	NA	False	NA	-2	True	AATAAA	-26	NA	39534798	39439306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_60824_7	chr6	-	3372	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	152	5820	152	6	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCCGGGT	NA	False	NA	NA	False	CATAAA	-22	NA	39534649	39445131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
Isoform_60827_327	chr6	-	627	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	103	377	0	11	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGAATGGCTGTTAGG	NA	False	NA	-7	True	AATAAA	-23	NA	39787819	39779114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39779479_39782304_39782546_39787797
Isoform_60829_13	chr6	-	513	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	-2	-11	-2	11	multi-exon	FALSE	canonical	3	169	junction_1	481	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGAATGGCTGTTAGG	NA	False	NA	-7	True	AATAAA	-23	NA	39787821	39779114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_39779479_39782420_39782546_39787797
Isoform_60830_3	chr6	-	3273	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.13454714835211	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTTCCCTTGATGTT	8190	False	NA	NA	False	AATAAA	-15	NA	42350202	42335420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
Isoform_60831_12	chr6	-	2598	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	77	-4	18	4	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCTGTGGTATTAAGT	NA	False	NA	-2	True	ATTAAA	-23	NA	43643135	43321930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
Isoform_60836_4	chr6	-	2649	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	11	38	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	239.071333482446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571953	47507214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_60837_47	chr6	-	2636	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	9	142	9	38	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571955	47507214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_60839_14	chr6	-	2623	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	43	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571964	47507209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
Isoform_60841_70	chr6	-	2519	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	44	combination_of_known_junctions	TRUE	canonical	3	443	junction_6	133.55213528621	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571958	47507208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_60842_21	chr6	-	2510	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-12	44	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571976	47507208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
Isoform_60849_15	chr6	-	899	7	ISM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-34	22254	-6	-7	5prime_fragment	FALSE	canonical	3	670	junction_4	95.1402473544539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTAAGATTTTTTT	NA	False	NA	6	True	NA	NA	NA	47571998	47529326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
Isoform_6085_5	chr11	-	2375	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	15	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_3	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTGCTTTTTTTTCTT	NA	False	NA	-3	True	AATAAA	-33	NA	72686667	72668060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
Isoform_60856_1098	chr6	-	2325	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	69	5	3	-5	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTTGTTTGCCTTTT	8959	False	NA	18	True	TTTAAA	-19	NA	47790295	47773079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_60857_64	chr6	-	2383	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	69	-53	3	53	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTTTTATTTCTTC	8959	False	NA	76	True	NA	NA	NA	47790295	47773021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_60858_20	chr6	-	2483	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	-89	5	-89	-5	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGTTGTTTGCCTTTT	8801	False	NA	18	True	TTTAAA	-19	NA	47790453	47773079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
Isoform_6086_3	chr11	-	2145	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	28	-15	-20	-2	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGCTTTTTTTTCTTT	NA	False	NA	-2	True	AATAAA	-34	NA	72686940	72668059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
Isoform_60862_24	chr6	-	2900	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	294	-3	-5	3	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTTTGGGTTTGCTTT	6014	False	NA	-4	True	AATACA	-23	NA	47807507	47796196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
Isoform_60864_16	chr6	-	3051	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-63	-140	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATCTGCACGGGGGCA	NA	False	NA	-8	True	AATAAA	-9	NA	48024791	48001278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
Isoform_60865_3	chr6	-	3247	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-122	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48024850	48001141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
Isoform_60866_5	chr6	-	3115	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-127	-140	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATCTGCACGGGGGCA	NA	False	NA	-8	True	AATAAA	-9	NA	48024855	48001278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
Isoform_60867_11	chr6	-	3198	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-73	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48024801	48001141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
Isoform_60869_20	chr6	-	3082	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-38	140	-38	-140	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATCTGCACGGGGGCA	NA	False	NA	-8	True	AATAAA	-9	NA	48025883	48001278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
Isoform_6087_6	chr11	-	2065	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	108	-15	60	-2	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGCTTTTTTTTCTTT	NA	False	NA	-2	True	AATAAA	-34	NA	72686860	72668059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
Isoform_60870_17	chr6	-	3219	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-38	3	-38	-3	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGAGTGTTTCCTGTT	NA	False	NA	-6	True	AATAGA	-11	NA	48025883	48001141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
Isoform_60876_13	chr6	-	3593	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	54	1	7	-1	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1104	False	NA	1	True	AATAAA	-16	NA	48063473	48039329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_60877_6	chr6	-	3687	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	-40	1	-40	-1	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1010	False	NA	1	True	AATAAA	-16	NA	48063567	48039329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_60878_11	chr6	-	3596	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	54	1	7	-1	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1104	False	NA	1	True	AATAAA	-16	NA	48063473	48039329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_60879_3	chr6	-	3697	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-47	1	-47	-1	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	1003	False	NA	1	True	AATAAA	-16	NA	48063574	48039329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_60880_8	chr6	-	1232	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	54	3841	7	-25	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATAAAATAAAAAA	1104	False	NA	NA	False	NA	NA	NA	48063473	48043169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
Isoform_60886_18	chr6	-	4107	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	243	-5	-10	5	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49191648	49062151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_60892_14	chr6	-	4187	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	154	4	-99	-4	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACAGCTTCTGTAGT	NA	False	NA	-28	True	AATAAA	-11	NA	49191737	49062160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_60893_5	chr6	-	4345	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-2	2	-2	-2	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCTTCTGTAGTAT	NA	False	NA	-26	True	AATAAA	-13	NA	49191893	49062158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_60895_6	chr6	-	4252	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	91	2	91	-2	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCTTCTGTAGTAT	NA	False	NA	-26	True	AATAAA	-13	NA	49191800	49062158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
Isoform_6090_143	chr11	-	1318	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	12	2	12	-2	multi-exon	FALSE	canonical	3	946	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTGCGCATGGAATT	NA	False	NA	-29	True	AATAAA	-23	NA	73067851	73066346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73067578_73067764
Isoform_60904_5	chr6	-	716	4	FSM	ENSMUSG00000029814.11	ENSMUST00000203680.2	711	4	-10	5	-10	-5	multi-exon	FALSE	canonical	3	19	junction_1	219.654273803175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTGTGTGTGTGT	NA	False	NA	-8	True	ATTAAA	-17	NA	49191648	49144851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49145040_49145403_49145453_49190200_49190262_49191230
Isoform_60905_76	chr6	-	955	3	ISM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	18454	3	18453	1	3prime_fragment	FALSE	canonical	3	544	junction_2	21.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	NA	False	NA	-7	True	AATAAA	-12	NA	49222491	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_49221666_49221801_49221870_49222409
Isoform_60906_66	chr6	-	1801	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	-1	-1	-1	1	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4592	False	NA	-7	True	AATAAA	-12	NA	49240965	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_60908_12	chr6	-	2134	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4571	False	NA	-7	True	AATAAA	-12	NA	49240986	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
Isoform_60909_10	chr6	-	2383	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4603	False	NA	-7	True	AATAAA	-12	NA	49240954	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
Isoform_6091_265	chr11	-	645	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	10	677	10	140	multi-exon	FALSE	canonical	3	946	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCGTTCCTTGCTTAG	NA	False	NA	-22	True	ATTAAA	-13	NA	73067853	73067021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73067578_73067764
Isoform_60911_7	chr6	-	1797	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	-23	3	0	1	multi-exon	FALSE	canonical	3	74	junction_2	153.460491492044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4590	False	NA	-7	True	AATAAA	-12	NA	49240967	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_60914_13	chr6	-	1817	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	153.460491492044	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	4573	False	NA	-7	True	AATAAA	-12	NA	49240984	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_49221666_49221801_49221867_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
Isoform_60916_4	chr6	-	946	3	NNC	ENSMUSG00000029817.12	novel	1777	8	NA	NA	18453	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	291	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATTGTCTCTTTAT	NA	False	NA	-7	True	AATAAA	-12	NA	49222491	49220860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_49221666_49221801_49221867_49222415
Isoform_60919_22	chr6	-	2100	9	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	10255	-2	10233	0	3prime_fragment	FALSE	canonical	3	41	junction_4	6.36396103067893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	NA	False	NA	0	True	ATTAAA	-18	NA	50228494	50184380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255
Isoform_60920_20	chr6	-	2144	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-9	-2	-9	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8757	False	NA	0	True	ATTAAA	-18	NA	50238758	50184380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
Isoform_60921_3	chr6	-	2239	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-103	-3	103	1	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTGGCTGTTCTATGTG	8663	False	NA	1	True	ATTAAA	-19	NA	50238852	50184379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
Isoform_60922_3	chr6	-	3375	23	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	13	-3	combination_of_known_junctions	TRUE	canonical	2	5	junction_22	3.69861488480697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTGGGTTACAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	50433128	50273781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
Isoform_60923_1237	chr6	-	528	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	64	2531	64	143	multi-exon	FALSE	canonical	3	4909	junction_2	335	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGGGTACGGTCTTTA	NA	False	NA	NA	False	AGTAAA	-13	NA	50543454	50542073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60926_550	chr6	-	561	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	33	2529	33	145	multi-exon	FALSE	canonical	3	4909	junction_2	335	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTACGGTCTTTATT	NA	False	NA	NA	False	AGTAAA	-15	NA	50543485	50542071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60927_82	chr6	-	977	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	33	2113	33	561	multi-exon	FALSE	canonical	3	4909	junction_2	335	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	50543485	50541655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60928_46	chr6	-	1221	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	33	1869	33	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543485	50541411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60929_165	chr6	-	947	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	64	2112	64	562	multi-exon	FALSE	canonical	3	4909	junction_2	335	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTTGATCTGCAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	50543454	50541654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60930_67	chr6	-	627	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-33	2529	-33	145	multi-exon	FALSE	canonical	3	4909	junction_2	335	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTACGGTCTTTATT	NA	False	NA	NA	False	AGTAAA	-15	NA	50543551	50542071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60932_106	chr6	-	1190	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	64	1869	64	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543454	50541411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_50542366_50542471_50542649_50543395
Isoform_60934_3	chr19	+	304	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	0	642	0	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATCTTCGCTGGAAT	NA	False	NA	NA	False	AAAAAG	-16	NA	24853049	24853353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_+_24853000_24853400
Isoform_60937_19	chr6	-	1663	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	0	-1	0	1	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446825	51438102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60938_4	chr6	-	1560	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2846.0788655782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTTGGTGTAATG	NA	False	NA	-26	True	AATAAA	-12	NA	51446825	51438105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
Isoform_60939_36	chr6	-	1527	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446825	51438102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_6094_11	chr11	-	2694	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	20	9	-1	-9	multi-exon	FALSE	canonical	3	14	junction_11	20.3534877308514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTGTACACTCGGAAC	4485	False	NA	-10	True	ATTAAA	-14	NA	73089848	73074431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
Isoform_60940_3	chr6	-	1754	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGCACTGCTACAACTT	NA	False	NA	NA	False	AATAAA	-17	NA	51446860	51437910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60941_11	chr6	-	1407	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	49	191	0	1	multi-exon	FALSE	canonical	3	499	junction_1	2676.86493431088	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446825	51438102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60942_3	chr6	-	1400	11	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	0	748	0	-727	5prime_fragment	FALSE	canonical	3	287	junction_1	2099.44196395137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACCCTTGTGTATTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	51446825	51438851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60943_18	chr6	-	1704	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-73	7	0	-7	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAATTGTGTAATTATA	NA	False	NA	-21	True	AATAAA	-10	NA	51446825	51439746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60945_4	chr6	-	1581	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-70	7	3	-7	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAATTGTGTAATTATA	NA	False	NA	-21	True	AATAAA	-10	NA	51446822	51439746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_6095_35	chr11	-	2546	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	18	6	-3	-5	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4483	False	NA	-6	True	ATTAAA	-18	NA	73089850	73074427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
Isoform_60951_8	chr6	-	577	5	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-19	3838	0	-780	5prime_fragment	FALSE	canonical	3	874	junction_4	3455.50765988154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGATACTATTGAAAT	NA	False	NA	1	True	NA	NA	NA	51446825	51443577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
Isoform_60952_50	chr6	-	541	4	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-73	3838	0	-780	5prime_fragment	FALSE	canonical	3	5712	junction_3	1063.54668705965	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGATACTATTGAAAT	NA	False	NA	1	True	NA	NA	NA	51446825	51443577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_51443686_51443885_51444033_51444164_51444276_51446650
Isoform_60954_123	chr6	-	1633	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	6	1743	6	1	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	834	False	NA	-6	True	AATAAA	-19	NA	51989523	51836144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_60955_59	chr6	-	3369	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	11	2	-6	-2	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTTATGATGCTAATAA	839	False	NA	-7	True	AATAAA	-16	NA	51989518	51834403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_60958_8	chr6	-	2294	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	-38	-5	-38	5	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCATCTTGTGTATTTGG	NA	False	NA	-1	True	AATAAA	-24	NA	52135335	52132564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52134070_52134546
Isoform_60959_3	chr6	-	2065	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	-20	-2	-20	2	multi-exon	FALSE	canonical	2	5	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCCTAAGCATCTTGT	NA	False	NA	-9	True	AATAAA	-16	NA	52135317	52132572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52134070_52134546_52134642_52134844
Isoform_6096_3	chr11	-	2554	11	NNC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-250	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.5876176377938	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4215	False	NA	-6	True	ATTAAA	-18	NA	73090118	73074427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73090003
Isoform_60960_6	chr6	-	917	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	-28	1120	-28	135	multi-exon	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	9926	False	NA	NA	False	NA	NA	NA	52194513	52192597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52193011_52194009
Isoform_60961_3	chr6	-	1802	2	FSM	ENSMUSG00000000938.12	ENSMUST00000121043.2	1436	2	358	-724	299	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTAATTTCACCTCT	0	True	NA	-14	True	AATAAA	-14	NA	52217476	52208177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52209761_52217257
Isoform_60963_242	chr6	-	1779	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	44	2	-30	-2	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGAGCTTTTTGTT	2883	False	NA	-3	True	AATAAA	-18	NA	52617330	52523214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
Isoform_60968_3	chr6	-	1078	5	FSM	ENSMUSG00000063568.12	ENSMUST00000074541.6	2203	5	20	1105	20	-1105	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACATTGCAGTGATGT	NA	False	NA	NA	False	AATAAA	-24	NA	53045596	52746886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52747366_52754519_52754690_52789087_52789285_52870983_52871057_53045437
Isoform_60969_13	chr6	-	4714	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	91	5	91	-5	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACCTAGGAGCCTCTTG	NA	False	NA	-5	True	AATAAA	-12	NA	54543383	54482879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
Isoform_6097_6	chr11	-	1681	7	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	6.39444203108363	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTGATGACTGTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	73215460	73195819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
Isoform_60970_19	chr6	-	1500	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	90	3220	90	-2	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCCTTGTGTCTAAAT	NA	False	NA	-5	True	AGTAAA	-16	NA	54543384	54486094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
Isoform_60971_8	chr6	-	2706	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	-18	6	-18	-5	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTAGTTTTGTACATG	NA	False	NA	-6	True	AATAAA	-13	NA	54570180	54554594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
Isoform_60974_15	chr6	-	4151	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	168	-4	168	4	multi-exon	FALSE	canonical	2	6	junction_10	5.88175495258975	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAATGGCCAAGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	54949429	54900929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
Isoform_60975_48	chr6	-	873	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	19	3068	19	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2719	False	NA	-2	True	ATTAAA	-32	NA	54969916	54962632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
Isoform_60978_16	chr6	-	797	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-82	-284	7	0	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2707	False	NA	-2	True	ATTAAA	-32	NA	54969928	54962632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
Isoform_60979_4	chr6	-	1799	4	ISM	ENSMUSG00000003476.17	ENSMUST00000114374.9	1440	12	24378	-1158	7038	-6	3prime_fragment	FALSE	canonical	1	1	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTATCCAGCCTTACGC	NA	False	NA	NA	False	NA	NA	NA	55070520	55067039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263
Isoform_6098_3	chr11	-	6336	24	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	191	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.74768795466461	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74413386	74274308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
Isoform_60980_388	chr6	-	484	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	9	1	0	1	multi-exon	FALSE	canonical	3	1056	junction_2	222.021395365402	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGATTTGATTTATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	56681668	56678048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_60981_10	chr6	-	507	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	-14	1	4	1	multi-exon	FALSE	canonical	3	1056	junction_2	222.021395365402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGATTTGATTTATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	56681691	56678048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_60982_6	chr6	-	546	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	9	-61	0	61	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATATTGATTTCTGTT	NA	False	NA	NA	False	AATATA	-16	NA	56681668	56677986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
Isoform_60985_4	chr6	-	3736	4	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	83.0314532103481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	NA	False	NA	-2	True	AATAAA	-15	NA	56774347	56754510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774147
Isoform_60986_4	chr6	-	3903	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	-90	3	-13	-2	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCTGTTGGTTTTTTGGT	9613	False	NA	-3	True	AATAAA	-14	NA	56774811	56754511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
Isoform_60988_51	chr6	-	3815	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	1	0	1	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9704	False	NA	0	True	AATAAA	-17	NA	56774720	56754508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
Isoform_60991_9	chr6	-	3804	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114321.2	3868	4	63	1	-14	-1	multi-exon	FALSE	canonical	3	30	junction_3	71.2569684701472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9689	False	NA	-2	True	AATAAA	-15	NA	56774735	56754510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467
Isoform_60992_4	chr6	-	1527	10	FSM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	-13	5	-13	-5	multi-exon	FALSE	canonical	2	7	junction_9	89.8419737478734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCTGTTGTCCAGAT	9821	False	NA	-5	True	AATAAA	-21	NA	56878884	56859389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56878822
Isoform_60993_7	chr6	-	1705	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-90	-548	-19	-3	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTTGTCCAGATCA	1227	False	NA	-3	True	AATAAA	-23	NA	56900894	56859387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
Isoform_60995_112	chr6	-	1639	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	34	3	-8	-3	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTTGTCCAGATCA	1238	False	NA	-3	True	AATAAA	-23	NA	56900883	56859387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
Isoform_60997_52	chr6	-	804	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2769	0	-2769	multi-exon	FALSE	canonical	3	182	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGTTTGTCTTATTTC	NA	False	NA	NA	False	TATAAA	-19	NA	57669063	57666329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_57666864_57668793
Isoform_60999_10	chr6	-	2910	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	10	-1	1	1	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGATTTTTTTGGG	NA	False	NA	-1	True	AATAAA	-15	NA	57802134	57729248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
Isoform_6100_47	chr11	-	1870	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	320	3613	-15	-3612	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTCTGGATGTAGATT	NA	False	NA	-10	True	AATAAA	-18	NA	74615176	74568387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61000_8	chr6	-	1147	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	127	6	-5	-6	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAAAATCTTTCCTGG	7701	False	NA	-12	True	AATAAA	-14	NA	60805861	60708568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
Isoform_61001_85	chr6	-	1218	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	5	0	-5	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTCATTTCTCAACGT	NA	False	NA	-12	True	AATAAA	-14	NA	67014390	67012084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
Isoform_61004_13	chr6	-	1752	9	FSM	ENSMUSG00000054474.16	ENSMUST00000160918.8	2077	9	92	233	0	-1	multi-exon	TRUE	canonical	1	2	junction_8	2.47171499166065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGGTGTTTTGTTTTGT	NA	False	NA	-1	True	NA	NA	NA	71121331	71105382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203_71118439_71121274
Isoform_61005_77	chr6	-	3141	17	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	41	-4	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71586082	71566024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
Isoform_61008_4	chr6	-	3213	17	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	41	3	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCATTTCTTAGTGAC	NA	False	NA	-1	True	AATAAA	-21	NA	71586082	71565952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
Isoform_61009_33	chr6	-	4760	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-13	69	-13	-4	multi-exon	FALSE	canonical	3	176	junction_18	110.285703472991	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609902	71566024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_6101_28	chr11	-	1895	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	295	3613	-40	-3612	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTCTGGATGTAGATT	NA	False	NA	-10	True	AATAAA	-18	NA	74615201	74568387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61010_3	chr6	-	4858	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-37	-5	-37	5	multi-exon	TRUE	canonical	3	176	junction_18	110.285703472991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATTTCTTAGTGACTA	NA	False	NA	1	True	AATAAA	-23	NA	71609926	71565950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
Isoform_61014_353	chr6	-	738	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	42	2941	-5	225	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAAATTTATTGTGCA	NA	False	NA	-28	True	ATTAAA	-27	NA	71800752	71792921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_61015_9	chr6	-	1587	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	23	2111	23	1055	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTCTACTTTACTTT	NA	False	NA	-1	True	AATAAA	-16	NA	71800771	71792091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_61016_57	chr6	-	977	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	24	2720	-23	446	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTCACTGTCTCCTAC	NA	False	NA	-7	True	AATAAA	-18	NA	71800770	71792700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
Isoform_6102_4	chr11	-	4397	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	323	1083	-12	-1082	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGATGGTTGTTGATTGT	NA	False	NA	-6	True	AATAAA	-20	NA	74615173	74565857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61021_622	chr6	-	2585	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	622	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGTAAGCGTGTACA	3045	False	NA	-2	True	AATAAA	-27	NA	71885737	71857622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
Isoform_61024_77	chr6	-	2530	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGTAAGCGTGTACA	3049	False	NA	-2	True	AATAAA	-27	NA	71885733	71857622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
Isoform_61030_937	chr6	-	2148	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	3	93	3	-93	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGCTGTTGTTTCATA	NA	False	NA	-26	True	ATTAAA	-17	NA	72322164	72295753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
Isoform_61033_14	chr6	-	2990	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	3	-749	3	749	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTGATTAGCAGTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72322164	72294911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
Isoform_61038_7	chr6	-	2091	4	ISM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	39	5	0	-5	intron_retention	FALSE	canonical	3	875	junction_2	70.8723421998235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8447	False	NA	NA	False	TATAAA	-10	NA	72339376	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394
Isoform_61039_29	chr6	-	1409	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	20	5	16	-5	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8428	False	NA	NA	False	TATAAA	-10	NA	72339395	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
Isoform_6104_3	chr11	-	5482	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	315	6	-20	-5	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGATCTGGTGGGGTT	NA	False	NA	NA	False	ATTAAA	-41	NA	74615181	74564780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61040_539	chr6	-	1387	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	42	5	0	-5	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8450	False	NA	NA	False	TATAAA	-10	NA	72339373	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
Isoform_61044_43	chr6	-	1355	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8447	False	NA	NA	False	TATAAA	-10	NA	72339376	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
Isoform_61047_8	chr6	-	1385	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	413.657693630857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8447	False	NA	NA	False	TATAAA	-10	NA	72339376	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_72337626_72337857_72337933_72338104_72338210_72338394_72338523_72339223
Isoform_61048_10	chr6	-	1603	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	8	-5	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8466	False	NA	NA	False	TATAAA	-10	NA	72339357	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
Isoform_61049_4	chr6	-	675	3	FSM	ENSMUSG00000073002.10	ENSMUST00000101285.10	623	3	-59	7	-13	-1	multi-exon	FALSE	canonical	0	0	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAATGCTCTCTCTCTC	9524	False	NA	NA	False	AGTAAA	-14	NA	72357464	72346017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72346454_72347176_72347315_72357363
Isoform_6105_4	chr11	-	2061	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	322	3420	-13	-3419	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGACAGTGTCATT	NA	False	NA	NA	False	AATAAA	-21	NA	74615174	74568194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61050_25	chr6	-	746	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	72	2	72	-2	multi-exon	FALSE	canonical	3	289	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAGGCGCTTTACTCCTG	8165	False	NA	-20	True	AATAAA	-23	NA	72367614	72362207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72362637_72365244_72365404_72367456
Isoform_61051_35	chr6	-	670	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	144	6	144	-1	multi-exon	FALSE	canonical	3	289	junction_1	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACGAGGCGCTTTACT	8237	False	NA	-24	True	AATAAA	-19	NA	72367542	72362211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72362637_72365244_72365404_72367456
Isoform_61053_725	chr6	-	2803	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	2	-1	0	1	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416539	72409780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_61054_15	chr6	-	2884	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	-79	-1	-79	1	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416620	72409780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_61059_118	chr6	-	3388	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	0	-1	0	1	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTATTACTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	72416539	72409780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
Isoform_6106_3	chr11	-	4425	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	292	1086	-43	-1085	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCGGATGGTTGTTGAT	NA	False	NA	-9	True	AATAAA	-17	NA	74615204	74565860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_61066_8	chr6	-	2233	13	FSM	ENSMUSG00000056698.12	ENSMUST00000114069.8	2164	13	-69	0	2	0	multi-exon	FALSE	canonical	1	3	junction_12	16.532795690183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCCAAGATGAAGTT	NA	False	NA	1	True	AATAAA	-23	NA	72575394	72542904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72573418_72573450_72575304
Isoform_61067_42	chr6	-	2202	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	-68	-12	2	0	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCCAAGATGAAGTT	NA	False	NA	1	True	AATAAA	-23	NA	72575394	72542904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
Isoform_61070_47	chr6	-	4766	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	253	-6	253	6	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACATTACATGTATTA	4672	False	NA	-31	True	AATAAA	-18	NA	72593730	72585408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
Isoform_61076_9	chr6	-	3068	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-281	-899	21	5	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGATGTTTCTTTAGG	4844	False	NA	-3	True	AATAAA	-19	NA	72766216	72603355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
Isoform_61080_23	chr6	-	3025	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	22	-5	22	5	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGATGTTTCTTTAGG	4845	False	NA	-3	True	AATAAA	-19	NA	72766215	72603355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
Isoform_61085_3	chr6	-	1805	7	FSM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	-4	-58	-4	58	multi-exon	FALSE	canonical	3	65	junction_6	409.390196918946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	9148	False	NA	-26	True	AATAAA	-22	NA	72876279	72819493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72875962
Isoform_61086_22	chr6	-	3011	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	250	-10	-26	10	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTGGTGTTGAATTA	8715	False	NA	1	True	AATAAA	-28	NA	72876712	72818086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_61087_105	chr6	-	1615	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	240	1396	-36	59	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGCATGAGGTTTTTT	8705	False	NA	-25	True	AATAAA	-23	NA	72876722	72819492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_61088_25	chr6	-	1683	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	171	1397	-105	58	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8636	False	NA	-26	True	AATAAA	-22	NA	72876791	72819493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_61094_3	chr6	-	3107	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	151	-7	-125	7	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTCTTTGGTGTTGAA	8616	False	NA	-2	True	AATAAA	-25	NA	72876811	72818089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
Isoform_61096_360	chr6	-	527	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	164	-1	164	1	multi-exon	FALSE	canonical	3	26814	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935121	72934334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72934636_72934895
Isoform_611_9	SIRV8003	+	2938	1	FSM	SIRV8003A	SIRV8003	8000	1	0	5062	0	-5062	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATCGGTAAGCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	0	2938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8003_+_0_2900
Isoform_61100_4932	chr6	-	476	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	89	5	0	1	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	4932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935382	72934334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72934636_72934895_72935008_72935319
Isoform_61102_61	chr6	-	517	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	48	5	-41	1	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935423	72934334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72934636_72934895_72935008_72935319
Isoform_61106_65	chr6	-	1374	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	25	3601	25	522	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCATGTCAGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	81942914	81938432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
Isoform_61110_22	chr6	-	727	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	202	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTATGTCTCCCT	NA	False	NA	78	True	NA	NA	NA	82629855	82595770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
Isoform_61111_34	chr6	-	636	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	111	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTTCTTTTTCTT	NA	False	NA	-13	True	NA	NA	NA	82629855	82595861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
Isoform_61114_193	chr6	-	684	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	1030	-4	112	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82629855	82624711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_61115_156	chr6	-	1133	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	581	-4	34	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	NA	False	NA	-2	True	NA	NA	NA	82629855	82624262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_61117_16	chr6	-	740	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	-3	1032	-3	110	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCTGTGTTTTATATT	NA	False	NA	-3	True	AATAAA	-17	NA	82629913	82624713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_61118_11	chr6	-	1177	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	12	580	12	35	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82629898	82624261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
Isoform_61120_5	chr6	-	1081	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-16	34	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	6093	False	NA	-2	True	NA	NA	NA	82682362	82624262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
Isoform_61122_14	chr6	-	941	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16608	35	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82665738	82624261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
Isoform_61124_5	chr6	-	1738	3	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-4	35	intron_retention	FALSE	canonical	3	735	junction_2	79	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82629855	82624261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_82625018_82628417_82629149_82629604
Isoform_6113_3	chr11	-	2920	8	ISM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	39123	-1	2638	1	3prime_fragment	FALSE	canonical	3	54	junction_4	7.7643875666864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGATGGCTATTTGT	7964	False	NA	-2	True	AATAAA	-20	NA	74748763	74740085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443
Isoform_61131_112	chr6	-	5493	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	17	3	17	-3	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCAGTGTGTGATTG	9415	False	NA	-4	True	AATAAA	-20	NA	82751418	82702008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
Isoform_61133_11	chr6	-	4102	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	-18	2	-18	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCGGGCGTGGTTATT	NA	False	NA	-7	True	NA	NA	NA	82916768	82888867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
Isoform_61134_13	chr6	-	4040	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	44	2	44	-2	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCGGGCGTGGTTATT	NA	False	NA	-7	True	NA	NA	NA	82916706	82888867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
Isoform_61135_8	chr6	-	1791	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	13.3510299228187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGCCTCTGCGTATGA	NA	False	NA	-9	True	ATTAAA	-14	NA	83010443	83007919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010046_83010351
Isoform_61136_40	chr6	-	1784	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	20	3	17	3	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010432	83007917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_61137_7	chr6	-	1714	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010436	83007917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_61138_4	chr6	-	1966	4	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	5	3	intron_retention	FALSE	canonical	3	31	junction_1	4.92160768674447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTCTGCGTATGAAT	NA	False	NA	-7	True	ATTAAA	-16	NA	83010444	83007917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83009397_83009515_83009610_83009747_83010048_83010351
Isoform_61139_8	chr6	-	1518	8	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	183.177063888179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATGTTACAGTCAAAAG	2008	False	NA	-17	True	AATAAA	-12	NA	83031441	83028265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_6114_11	chr11	-	4902	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-27	-2	-27	2	multi-exon	FALSE	canonical	3	24	junction_12	16.1025776095344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787913	74740089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_61142_34	chr6	-	1780	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	-58	3	-58	-3	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGGGTTGGATCTTC	1839	False	NA	-1	True	AATAAA	-28	NA	83031610	83028249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_61144_395	chr6	-	1612	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	110	3	-19	-3	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGGGTTGGATCTTC	2007	False	NA	-1	True	AATAAA	-28	NA	83031442	83028249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_61147_11	chr6	-	1941	6	FSM	ENSMUSG00000068329.13	ENSMUST00000144058.4	1108	6	-630	-203	-25	1	multi-exon	FALSE	canonical	3	493	junction_5	53.5447476415755	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	2001	False	NA	-15	True	AATAAA	-14	NA	83031448	83028263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593
Isoform_61148_6	chr6	-	1830	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	429	junction_6	64.9095524557056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATGTTACAGTCAAAAG	2007	False	NA	-17	True	AATAAA	-12	NA	83031442	83028265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_61149_9	chr6	-	1532	7	NIC	ENSMUSG00000068329.13	novel	1605	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	199.430578286168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACAGTCAAAAGTGGGG	2007	False	NA	-12	True	AATAAA	-17	NA	83031442	83028260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029981_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_6115_9	chr11	-	4755	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-15	3	-15	2	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787901	74740089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_61151_6	chr6	-	1730	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-30	-3	intron_retention	FALSE	canonical	3	429	junction_6	39.7844888814165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGGGTTGGATCTTC	1996	False	NA	-1	True	AATAAA	-28	NA	83031453	83028249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
Isoform_61152_3	chr6	-	2693	2	ISM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-801	-268	-801	1	intron_retention	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	6375	False	NA	-5	True	AAAACA	-21	NA	83048075	83045303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_83045956_83046034
Isoform_61153_74	chr6	-	2305	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-800	-269	-800	2	multi-exon	FALSE	canonical	3	90	junction_1	3	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTCCAGTTGTCTC	6376	False	NA	-4	True	AAAACA	-22	NA	83048074	83045302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83045956_83046034_83046273_83046660
Isoform_61156_8	chr6	-	2421	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-919	-266	-919	-1	multi-exon	FALSE	canonical	3	90	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCAGTCTCCAGTTGT	6257	False	NA	-7	True	AAAACA	-19	NA	83048193	83045305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83045956_83046034_83046273_83046660
Isoform_6116_3	chr11	-	3368	17	ISM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-39	7302	-39	-1	5prime_fragment	FALSE	canonical	3	24	junction_5	18.096529363389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74787925	74747393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
Isoform_61160_5	chr6	-	2908	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-137	-1535	-137	1268	multi-exon	FALSE	canonical	3	90	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	7039	False	NA	NA	False	NA	NA	NA	83047411	83044036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83045956_83046034_83046273_83046660
Isoform_61162_4	chr6	-	1542	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	-27	-1	-27	1	multi-exon	FALSE	canonical	3	96	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	7217	False	NA	-5	True	AAAACA	-21	NA	83047233	83045303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83046273_83046660
Isoform_61163_3	chr6	-	1233	3	NIC	ENSMUSG00000087578.2	novel	891	3	NA	NA	-1	414	combination_of_known_splicesites	TRUE	canonical	1	1	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGACGTGGATATAT	NA	False	NA	NA	False	NA	NA	NA	83086036	83083174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83084172_83084723_83084788_83085864
Isoform_61164_4	chr6	-	1283	5	FSM	ENSMUSG00000030035.15	ENSMUST00000146328.4	981	5	-40	-262	-21	0	multi-exon	TRUE	canonical	3	42	junction_4	48.7769156466458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098408	83096025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097855_83098183
Isoform_61165_20	chr6	-	1298	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	120	1	-33	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098420	83096025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
Isoform_61166_17	chr6	-	1174	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	138	2	-15	-1	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTGATTCTGGGTAG	NA	False	NA	-9	True	ATTAAA	-15	NA	83098402	83096026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
Isoform_61167_3	chr6	-	1770	4	NIC	ENSMUSG00000030035.15	novel	1902	4	NA	NA	-24	0	intron_retention	FALSE	canonical	3	42	junction_3	56.1921307262463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098411	83096025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83096702_83096848_83097026_83097165_83097855_83098183
Isoform_61168_5	chr6	-	1767	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	135	0	-18	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098405	83096025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
Isoform_61169_33	chr6	-	1225	5	FSM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	-124	-63	-124	0	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATCGAATTGCTGGA	NA	False	NA	-10	True	ATTAAA	-18	NA	83102134	83098745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
Isoform_6117_4	chr11	-	1798	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	90	1811	-5	-1351	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCCACAGTCTCCGATA	NA	False	NA	NA	False	AATAAA	-26	NA	74816534	74798995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
Isoform_61171_31	chr6	-	1182	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	28	6	10	-6	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTCCTTGTCTGAGC	9910	False	NA	-6	True	TATAAA	-12	NA	83133351	83129696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
Isoform_61175_1043	chr6	-	2059	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	12	14	12	-14	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1043	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTTTCTGAAATGCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	83294576	83282686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
Isoform_6118_5	chr11	-	1151	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	273	1759	0	1183	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAGAAAGTGTAAGTA	NA	False	NA	NA	False	TTTAAA	-18	NA	74816501	74799383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
Isoform_6119_4	chr11	-	3119	2	FSM	ENSMUSG00000043099.6	ENSMUST00000055619.6	3497	2	375	3	375	-3	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCCTGTGGCTCTCTTCT	6878	False	NA	NA	False	AATAAA	-20	NA	75059970	75055393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75058371_75059828
Isoform_61192_3	chr6	-	1516	3	ISM	ENSMUSG00000034832.16	ENSMUST00000056191.2	2523	4	33	5023	-13	1029	5prime_fragment	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAGAAAAAGAAGCCC	NA	False	NA	NA	False	NA	NA	NA	83418627	83380443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_83381807_83418198_83418256_83418531
Isoform_61193_3	chr6	-	2434	4	ISM	ENSMUSG00000034832.16	ENSMUST00000186548.7	5944	12	-175	35416	-175	1033	5prime_fragment	FALSE	canonical	1	2	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGAAGCCCCCCA	9162	False	NA	NA	False	NA	NA	NA	83433549	83380439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_83381807_83418198_83418256_83431731_83432463_83433270
Isoform_61194_84	chr6	-	1042	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	64	1	2	-1	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGTTCGTTTATTT	NA	False	NA	-4	True	AATAAA	-22	NA	83483887	83457199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
Isoform_61196_8	chr6	-	938	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCAGTTGTTCGTTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	83483898	83457201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
Isoform_61197_19	chr6	-	942	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	64	1	2	-1	multi-exon	FALSE	canonical	3	23	junction_1	78.3019795407498	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTGTTCGTTTATTT	NA	False	NA	-4	True	AATAAA	-22	NA	83483887	83457199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
Isoform_61198_6	chr6	-	925	3	ISM	ENSMUSG00000014554.14	ENSMUST00000138941.3	828	7	-96	9658	-10	241	5prime_fragment	FALSE	canonical	3	197	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	83483899	83466948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_83467591_83473667_83473781_83483729
Isoform_61199_5	chr6	-	791	2	FSM	ENSMUSG00000014554.14	ENSMUST00000147060.2	561	2	2	-232	2	232	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83483887	83466957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83467591_83483729
Isoform_612_4	SIRV8003	+	644	1	FSM	SIRV8003A	SIRV8003	8000	1	7355	1	7355	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	7355	7999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_SIRV8003_+_7400_8000
Isoform_6120_16	chr11	-	2507	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	12	151	12	-151	multi-exon	FALSE	canonical	3	105	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGCTTTTCTGTAAC	1649	False	NA	-9	True	TATAAA	-9	NA	75069649	75066918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069437
Isoform_61200_22	chr6	-	2095	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	280	-11	-10	-2	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGATTTGTCTGACCGA	NA	False	NA	-6	True	AATAAA	-24	NA	83549431	83520194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
Isoform_61202_14	chr6	-	1371	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5452	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	36.2724068680312	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2736	False	NA	-9	True	NA	NA	NA	83675073	83669785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961_83674051_83674952
Isoform_61203_5	chr6	-	2400	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5446	2	intron_retention	FALSE	canonical	3	98	junction_3	15.6914697279198	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGGCGGACTTTGCTT	2730	False	NA	-9	True	NA	NA	NA	83675079	83669785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_83670449_83671329_83671456_83672566_83674051_83674952
Isoform_61205_24	chr6	-	2949	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	37	-2	14	2	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTAGTGTGTGACCAG	9749	False	NA	-2	True	NA	NA	NA	83752758	83745864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
Isoform_61206_184	chr6	-	1119	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	1	1864	1	-333	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGAGTTCATCTTCTT	9713	False	NA	-12	True	AATAAA	-30	NA	83752794	83747730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
Isoform_61208_69	chr6	-	3295	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	28	659	0	-659	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCCAGGTTATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	83808695	83783041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
Isoform_6121_35	chr11	-	885	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	30	1755	-18	104	multi-exon	FALSE	canonical	3	105	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCTCCTGCTGCCC	1667	False	NA	-1	True	AATAAA	-20	NA	75069631	75068522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069437
Isoform_61213_23	chr6	-	5384	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	56	-1	0	1	multi-exon	TRUE	canonical	3	201	junction_13	26.9684454901315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046439	84595467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
Isoform_61216_5	chr6	-	546	3	FSM	ENSMUSG00000033769.17	ENSMUST00000162786.2	565	3	18	1	0	-1	multi-exon	FALSE	canonical	3	244	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATCATTGAGTAG	NA	False	NA	NA	False	AATAAA	-30	NA	85046439	84981800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_84982019_84988299_84988466_85046277
Isoform_61217_489	chr6	-	1229	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	0	1	0	-1	multi-exon	FALSE	canonical	3	345	junction_2	5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTGTGCGTTGTCCTT	7982	False	NA	NA	False	AATACA	-20	NA	85114748	85110660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85111271_85113804_85114096_85114420
Isoform_61219_11	chr6	-	1259	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	-31	2	-31	-2	multi-exon	FALSE	canonical	3	345	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGTGTGCGTTGTCCT	7951	False	NA	NA	False	AATACA	-19	NA	85114779	85110661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85111271_85113804_85114096_85114420
Isoform_6122_3	chr11	-	875	2	FSM	ENSMUSG00000038268.5	ENSMUST00000123489.2	745	2	-28	-102	20	102	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCCTGCTGC	1657	False	NA	-3	True	AATAAA	-18	NA	75069641	75068524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069455
Isoform_61221_13	chr6	-	4939	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	7	1173	7	-1173	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTCTGGATGTAGATG	NA	False	NA	-15	True	ATTAAA	-24	NA	85351609	85313121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
Isoform_61222_11	chr6	-	6153	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	-33	-1	-33	1	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85351649	85311947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
Isoform_61224_17	chr6	-	4149	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	-118	4	-48	1	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85351664	85311947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
Isoform_61226_35	chr6	-	1035	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	3	0	3	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428262	85423791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_61227_20	chr6	-	1075	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	-37	0	-37	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428302	85423791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
Isoform_61228_24	chr6	-	1011	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	70	-128	45	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428882	85423791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
Isoform_61229_4	chr6	-	1083	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	-3	-127	-3	-1	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428955	85423792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
Isoform_6123_151	chr11	-	2040	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	45	54	45	-1	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCTCCTGCTGCCC	NA	False	NA	-1	True	AATAAA	-20	NA	75081300	75068522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_61230_3	chr6	-	2869	4	ISM	ENSMUSG00000047013.16	ENSMUST00000161546.2	6357	13	27418	962	27418	-962	3prime_fragment	FALSE	canonical	2	3	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACATTA	NA	False	NA	NA	False	NA	NA	NA	85452422	85447523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_85450071_85450182_85450299_85452061_85452221_85452375
Isoform_61231_8	chr6	-	3086	4	FSM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-66	-1	-66	1	multi-exon	FALSE	canonical	2	6	junction_3	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGTGGATCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	85881932	85876031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85878596_85878934_85879080_85879173_85879312_85881693
Isoform_61235_4	chr6	-	6437	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	-7	5	-7	-5	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAGGTGTACTATCTT	7313	False	NA	-3	True	NA	NA	NA	85938656	85919254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
Isoform_6124_11	chr11	-	3643	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	36	-1540	36	1540	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTCTATTTGCT	NA	False	NA	-19	True	NA	NA	NA	75081309	75066928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_61241_58	chr6	-	3672	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	11	612	0	-612	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTCTTTTTCTTTTCT	NA	False	NA	0	True	ATTAAA	-21	NA	86374125	86363599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
Isoform_61249_3	chr6	-	469	2	NIC	ENSMUSG00000101655.2	novel	775	2	NA	NA	261	-4	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGGGTGAAATTTTTT	7280	False	NA	NA	False	AATAAA	-15	NA	86464925	86460361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_86460682_86464776
Isoform_6125_11	chr11	-	2132	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	45	-38	45	38	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCGGCTTATTGTGTG	NA	False	NA	91	True	NA	NA	NA	75081300	75068430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_61250_10	chr6	-	2754	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	-27	1939	-27	35	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTTTGTCTGGTCCTTG	3996	False	NA	NA	False	CATAAA	-22	NA	86646170	86625962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
Isoform_61252_445	chr6	-	817	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	64	-1	-64	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTGACAAATATCT	7650	False	NA	-10	True	AATAAA	-22	NA	86661500	86652196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
Isoform_61254_17	chr6	-	868	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	13	-1	-13	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTTCTACACATAG	7650	False	NA	-12	True	ATTAAA	-16	NA	86661500	86652145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
Isoform_61259_248	chr6	-	2903	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	39	7	39	-7	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATATGCTCCTGTTT	NA	False	NA	-25	True	AATAAA	-13	NA	86710326	86668756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
Isoform_6126_5	chr11	-	3797	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	43	-1701	43	1701	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGTAGGCCCTGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	75081302	75066767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
Isoform_6127_6	chr11	-	2096	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCCTTTCTCCTGCTG	NA	False	NA	-4	True	AATAAA	-17	NA	75081304	75068525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
Isoform_61273_58	chr6	-	1959	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	44	-1	24	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4650	False	NA	-1	True	ATTAAA	-19	NA	86770522	86713821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
Isoform_61274_97	chr6	-	1157	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	54	791	34	23	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGACTATGTTATTAT	4660	False	NA	NA	False	ATTAAA	-22	NA	86770512	86714613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
Isoform_61275_5	chr6	-	1303	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	19	680	-1	134	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACGTCTTTATCAGATT	4625	False	NA	NA	False	NA	NA	NA	86770547	86714502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
Isoform_61276_3	chr6	-	2458	11	FSM	ENSMUSG00000030047.15	ENSMUST00000101197.9	2493	11	21	14	21	-14	multi-exon	FALSE	canonical	0	0	junction_4	1.26885775404495	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAACAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	87473275	87436400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87437116_87439912_87440446_87442482_87442680_87443454_87443577_87444894_87444969_87447494_87447628_87453124_87453333_87465173_87465291_87469159_87469248_87472894_87473095_87473204
Isoform_61277_22	chr6	-	1953	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-14	2	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGATCTTCTGCCC	NA	False	NA	-10	True	AATAAA	-17	NA	87649143	87606728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
Isoform_6128_4	chr11	-	3689	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	45	1540	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTCTATTTGCT	NA	False	NA	-19	True	NA	NA	NA	75081300	75066928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
Isoform_61281_5	chr6	-	1188	7	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	40	36434	40	-36434	5prime_fragment	TRUE	canonical	3	8	junction_6	5.95585612840188	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTTGTCCATCGACC	NA	False	NA	NA	False	ATTAAA	-15	NA	87699743	87689008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
Isoform_61282_15	chr6	-	1377	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	-76	3304	-76	-5	multi-exon	FALSE	canonical	3	38	junction_1	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTGGTGCCGAGCCTTG	2618	False	NA	-1	True	TATAAA	-21	NA	87788837	87769138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87769823_87771595_87771780_87788328
Isoform_61283_78	chr6	-	1599	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	53	4185	2	3054	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATCTGTGCCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	87815727	87795435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_61284_14	chr6	-	1298	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	20	4519	20	2720	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACTTTGCCCTATAC	NA	False	NA	-16	True	NA	NA	NA	87815760	87795769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_61285_4	chr6	-	1726	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	-74	4185	-74	3054	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATCTGTGCCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	87815854	87795435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
Isoform_61289_738	chr6	-	1568	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	58	549	11	-82	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCCTTTTGTTTGTTT	NA	False	NA	-28	True	AATAAA	-28	NA	87828030	87820145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
Isoform_61290_406	chr6	-	1651	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	58	466	11	1	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828030	87820062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
Isoform_61295_24	chr6	-	1582	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	-50	82	0	-82	multi-exon	FALSE	canonical	3	506	junction_3	4411.10218652889	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCCTTTTGTTTGTTT	NA	False	NA	-28	True	AATAAA	-28	NA	87828062	87820145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
Isoform_61297_95	chr6	-	1630	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	32	-1	11	1	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828030	87820062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_61298_172	chr6	-	1538	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	32	91	11	-91	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828030	87820154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_61299_38	chr6	-	1662	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	0	-1	0	1	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828062	87820062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_613_14	chr10	-	3084	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	0	2	0	-2	multi-exon	FALSE	canonical	3	11	junction_2	37	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGTGATCGTTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	4337475	4317076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4319852_4324569_4324755_4337351
Isoform_61300_70	chr6	-	1570	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	0	91	0	-91	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828062	87820154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
Isoform_61303_137	chr6	-	1626	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	86	466	2	1	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828002	87820062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_61304_225	chr6	-	1560	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	60	558	13	-91	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828028	87820154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
Isoform_6131_943	chr11	-	2881	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	14	2182	0	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239136	75191173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_61311_44	chr6	-	1655	5	NIC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	-10	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5047.4819650495	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACAGTTTGGACTTT	NA	False	NA	-8	True	ATTAAA	-22	NA	87828052	87820062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822658_87822776_87827885
Isoform_61312_66	chr6	-	1539	5	NIC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	13	-91	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5047.4819650495	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828028	87820154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822658_87822776_87827885
Isoform_61315_84	chr6	-	2225	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACAGCTGCTGTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	88022238	87976094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
Isoform_61319_1064	chr6	-	2132	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	20	7	-5	4	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACAGCTGCTGTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	88022232	87976094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
Isoform_6132_24	chr11	-	2919	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	-24	2182	-24	2	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239174	75191173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_61324_63	chr6	-	2645	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	32	2	-5	-2	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGTGATCAAATGAC	NA	False	NA	-10	True	ATTAAA	-14	NA	88423489	88234317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_61325_454	chr6	-	2111	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	32	536	-5	3	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423489	88234851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_61326_38	chr6	-	2163	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	-22	538	-22	1	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGTGCCCATAGTC	NA	False	NA	-16	True	AATAAA	-13	NA	88423543	88234853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_61327_13	chr6	-	1451	6	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423489	88234851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_6133_40	chr11	-	2966	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	17	2094	3	90	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGACTCAGAGATTAGA	NA	False	NA	6	True	AATAAA	-28	NA	75239133	75191085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
Isoform_61338_2625	chr6	-	3075	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	72	25	-5	-25	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTCGTCATCTTTGT	9167	False	NA	-20	True	AATAAA	-14	NA	88495815	88480585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
Isoform_61339_97	chr6	-	3147	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	0	25	0	-25	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTCGTCATCTTTGT	9095	False	NA	-20	True	AATAAA	-14	NA	88495887	88480585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
Isoform_61345_4	chr6	-	1593	7	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2358	8	47	2	intron_retention	FALSE	canonical	3	333	junction_3	29.1799969537734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGACCTGAGCCTGTT	9322	False	NA	-12	True	AATAAA	-13	NA	88816524	88812903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166
Isoform_61346_120	chr6	-	1529	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2328	2	17	-2	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	9292	False	NA	-6	True	AATAAA	-19	NA	88816554	88812897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
Isoform_61348_190	chr6	-	1817	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	28	0	-6	0	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6992	False	NA	-4	True	AATAAA	-21	NA	88818854	88812895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
Isoform_61349_13	chr6	-	1939	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	-98	4	-14	-4	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	6866	False	NA	-8	True	AATAAA	-17	NA	88818980	88812899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
Isoform_61351_8	chr6	-	1788	12	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	132.928800926295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6985	False	NA	-5	True	AATAAA	-20	NA	88818861	88812896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
Isoform_61352_5	chr6	-	1930	11	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	14	2	intron_retention	FALSE	canonical	3	163	junction_10	101.098170112025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGACCTGAGCCTGTT	6943	False	NA	-12	True	AATAAA	-13	NA	88818903	88812903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817883_88818750
Isoform_61353_40	chr6	-	2059	8	FSM	ENSMUSG00000033152.14	ENSMUST00000145944.3	2065	8	25	-19	25	-2	multi-exon	FALSE	canonical	2	3	junction_6	2.71804251292006	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCACGCCTGTTTTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	88852001	88819541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998_88842272_88851900
Isoform_6136_74	chr11	-	1402	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	169	261	20	34	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTTCTTCCTTCTC	5547	False	NA	1	True	AATAAA	-15	NA	75313358	75300855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_61366_2448	chr6	-	3283	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	88	0	-4	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875674	88860455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
Isoform_6137_10	chr11	-	1518	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	53	261	53	34	multi-exon	FALSE	canonical	3	25	junction_1	3.91751691451488	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTTCTTCCTTCTC	5431	False	NA	1	True	AATAAA	-15	NA	75313474	75300855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_6138_6	chr11	-	1580	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	-11	263	-11	32	multi-exon	FALSE	canonical	3	25	junction_1	3.91751691451488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTGCTTCTTCCTTC	5367	False	NA	-1	True	AATAAA	-13	NA	75313538	75300857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
Isoform_61386_169	chr6	-	1102	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	15	4	15	-4	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	-9	True	AATAAA	-28	NA	89572619	89360136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
Isoform_61388_11	chr6	-	1032	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	15	-5	15	5	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTTCTGTTGACTCTTT	NA	False	NA	5	True	AATAAA	-42	NA	89572619	89360122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
Isoform_61389_6	chr6	-	3275	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-100	2847	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCCGCTGGGCCTTTTG	2747	False	NA	NA	False	AATGAA	-20	NA	90713769	90644543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
Isoform_61391_8	chr6	-	7030	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	7	0	-3	0	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093804	90990049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
Isoform_61395_118	chr6	-	1331	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	35	2106	35	-2106	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGAATGGCTTTTTTT	NA	False	NA	-3	True	ATTAAA	-19	NA	91450493	91441259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91442296_91444664_91444764_91450297
Isoform_614_39	chr10	-	3142	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	83	1	83	-1	multi-exon	FALSE	canonical	3	64	junction_2	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGATCGTTTTCTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	4338025	4317075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_6140_6	chr11	-	3512	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	-8	8	-8	-8	multi-exon	FALSE	canonical	3	32	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAGCCCGGGAATGC	7879	False	NA	NA	False	AATAAA	-9	NA	75918616	75910027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75913067_75915773_75915884_75918253
Isoform_61400_3	chr6	-	3401	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	62	9	-35	-9	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCAGTTTATGCAGT	NA	False	NA	NA	False	NA	NA	NA	91450466	91439162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91442296_91444664_91444764_91450297
Isoform_61402_5	chr6	-	1023	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	-1	2450	-1	-2450	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGAGTGGGTCCATTC	NA	False	NA	-4	True	AGTAAA	-16	NA	91450529	91441603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91442296_91444664_91444764_91450297
Isoform_61404_145	chr6	-	3625	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	4	5	0	-5	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	373	False	NA	-5	True	AATAAA	-11	NA	91492866	91466291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_61407_17	chr6	-	2409	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-88	5444	1	-5444	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAGGCTGTAGAAGT	374	False	NA	NA	False	AATAAA	-14	NA	91492865	91474698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_61408_10	chr6	-	2013	9	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-27	6853	-27	-6853	5prime_fragment	FALSE	canonical	3	87	junction_7	19.6273883896967	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACATACTTTTCTATT	435	False	NA	NA	False	AATATA	-16	NA	91492804	91476107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
Isoform_61410_4	chr6	-	1889	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	39	4145	-23	1168	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCCTGACCCTTGTT	NA	False	NA	1	True	AATAAA	-36	NA	92160975	92150650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_61411_194	chr6	-	731	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	32	5310	-30	3	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTAAGTGTGGCCTTGC	NA	False	NA	-6	True	AATAAA	-19	NA	92160982	92151815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_61413_4	chr6	-	1467	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	10	4596	10	717	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCCAAGACTCTTTA	NA	False	NA	-6	True	AATAAA	-14	NA	92161004	92151101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
Isoform_61416_7	chr6	-	5266	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	65	3	-11	-3	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTGTGTGTGCTTAAAA	NA	False	NA	-2	True	ATTAAA	-21	NA	92191841	92163695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
Isoform_61418_51	chr6	-	1382	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	2	0	2	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221629	92219041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_61419_9	chr6	-	1440	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-56	0	-56	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221687	92219041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_6142_57	chr11	-	2756	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	5	72	-4	-1	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCTTATTTTCTATC	NA	False	NA	-4	True	ATTAAA	-14	NA	76070468	75937123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
Isoform_61420_5	chr6	-	1523	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-139	0	-139	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221770	92219041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92220107_92220652_92220869_92221528
Isoform_61421_5	chr6	-	5221	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	-8	-1505	-8	1505	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAGATAAATATGCAGC	NA	False	NA	NA	False	AATAAA	-18	NA	92458381	92350859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
Isoform_61422_4	chr6	-	3125	7	ISM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	15	34504	15	-34504	5prime_fragment	FALSE	canonical	3	6	junction_6	7.33522702822179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGTG	NA	False	NA	NA	False	NA	NA	NA	92458358	92386868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
Isoform_61423_870	chr6	-	2228	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	1139	0	-6	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGCCTCACAGTTCTT	NA	False	NA	-13	True	AATAAA	-16	NA	95695781	95451128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
Isoform_61424_41	chr6	-	2290	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	-61	1138	-61	-5	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95695842	95451127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
Isoform_6143_3	chr11	-	2819	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	12	2	-1	-2	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCCATCCCTGAAGCT	NA	False	NA	66	True	ATTAAA	-14	NA	76070461	75937053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
Isoform_61436_4	chr6	-	2326	17	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	115	1	27	-1	3prime_fragment	FALSE	canonical	3	534	junction_12	65.1210411464682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTTAAAGTATATCAA	NA	False	NA	-8	True	AATAAA	-23	NA	97182493	97160968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266
Isoform_61437_159	chr6	-	2170	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	88	-1	0	1	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTAAAGTATATCAATA	NA	False	NA	-6	True	AATAAA	-25	NA	97182520	97160966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_61438_22	chr6	-	2214	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	51	-8	-28	8	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTATATCAATAATAGTAA	NA	False	NA	1	True	AATAAA	-32	NA	97182557	97160959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_61439_18	chr6	-	2219	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	87	-49	0	49	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTTAAATGTTTAC	NA	False	NA	42	True	AGTAAA	-21	NA	97182521	97160918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_6144_6	chr11	-	633	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	9	8	-5	-8	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATTTACTGTTTATG	NA	False	NA	-17	True	AATAAA	-8	NA	76070455	76067792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76068209_76070238
Isoform_61443_5	chr6	-	2403	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	50	-196	-29	7	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTCAAGTCTCTCTCTTA	NA	False	NA	-11	True	AGTAAA	-24	NA	97182558	97160771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
Isoform_61444_49	chr6	-	2133	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-4	336	1	1	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTAAAGTATATCAATA	NA	False	NA	-6	True	AATAAA	-25	NA	97182525	97160966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
Isoform_61445_8	chr6	-	2196	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-19	288	-11	49	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTTAAATGTTTAC	NA	False	NA	42	True	AGTAAA	-21	NA	97182540	97160918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
Isoform_61448_5	chr6	-	2576	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	169.693882744283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTTAAAGTATATCAA	NA	False	NA	-8	True	AATAAA	-23	NA	97182537	97160968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875_97182309_97182493
Isoform_6145_352	chr11	-	3422	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	116	2	-31	-2	multi-exon	FALSE	canonical	3	437	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGCCTTTCTCAGA	NA	False	NA	-3	True	AATAAA	-20	NA	76108374	76101398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76104750_76108303
Isoform_61451_14	chr6	-	3833	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	12.9871731591854	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97289395	97263827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
Isoform_61453_4	chr6	-	3864	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	1316	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	14.4366431924692	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGTTTGGATGCTTG	NA	False	NA	-3	True	AATAAA	-17	NA	97288025	97263829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287884
Isoform_61454_47	chr6	-	4476	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	27	0	27	0	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264419	100205525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
Isoform_61461_186	chr6	-	1982	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	7	1	7	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGGTGTAAATAATTAG	NA	False	NA	-3	True	AATAAA	-17	NA	100648111	100550043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_61462_6	chr6	-	2665	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-1	-674	-1	674	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTCTGTGTGCACATA	NA	False	NA	NA	False	NA	NA	NA	100648119	100549368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_61463_3	chr6	-	1544	7	NIC	ENSMUSG00000035378.18	novel	1638	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	79.4342845096219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGGTGTAAATAATTAG	NA	False	NA	-3	True	AATAAA	-17	NA	100648127	100550043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_100550750_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_61464_6	chr6	-	4210	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-111	5	-111	-5	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101354969	101126574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
Isoform_61465_3	chr6	-	3341	8	NNC	ENSMUSG00000035357.18	novel	1808	8	NA	NA	61926	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.39095723176481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101270045	101126574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101269876
Isoform_61466_25	chr6	-	2062	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4	6	0	-6	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGGCTGCTCCTTAAT	NA	False	NA	-39	True	AATAAA	-11	NA	106777022	106757167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
Isoform_61467_65	chr6	-	2068	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	13	3	0	-3	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCTGCTCCTTAATGTC	NA	False	NA	-36	True	AATAAA	-14	NA	106777022	106757164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_61468_3	chr6	-	4028	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	10	-1954	1	1954	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTATCTCAGAATTTC	NA	False	NA	-4	True	AATAAA	-25	NA	106777025	106755207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_61469_3	chr6	-	3436	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-3	-1349	0	1349	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCCTTCAACATTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	106777038	106755812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
Isoform_6147_9	chr11	-	3511	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	28	1	28	-1	multi-exon	FALSE	canonical	3	437	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGCCTTTCTCAGAA	NA	False	NA	-2	True	AATAAA	-21	NA	76108462	76101397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76104750_76108303
Isoform_61470_33	chr6	-	2381	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	7	205	7	-205	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTCTGAGTCTCATTTA	2479	False	NA	-15	True	NA	NA	NA	108162536	108084193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
Isoform_61471_26	chr6	-	2593	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	2472	False	NA	NA	False	AATAAA	-15	NA	108162543	108083988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
Isoform_61473_10	chr6	-	2595	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	5	-24	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTATTTCCCA	NA	False	NA	-8	True	CATAAA	-16	NA	112673626	112596834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_61479_43	chr6	-	3594	12	NIC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673609	112603375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_61484_3	chr6	-	2746	9	FSM	ENSMUSG00000030254.17	ENSMUST00000135092.2	2004	9	-26	-716	0	716	multi-exon	FALSE	canonical	3	205	junction_5	18.7112098753662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	112673631	112640595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
Isoform_61485_3	chr6	-	4490	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-39	4436	-39	-4433	multi-exon	TRUE	canonical	3	12	junction_1	6.19450418404635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATATGTGTACGTATGTG	6414	False	NA	NA	False	NA	NA	NA	112924266	112699367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
Isoform_61486_4	chr6	-	3403	20	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-32	9418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.54855015339254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGCTTGTTTGTGT	6421	False	NA	NA	False	NA	NA	NA	112924259	112706567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726385_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
Isoform_61487_4	chr6	-	1052	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	144	-374	2	-2	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGAATGACTTTTTA	NA	False	NA	-2	True	NA	NA	NA	113054150	113047360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113048397_113054134
Isoform_61488_72	chr6	-	1453	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	33	10	12	3	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGACAGTTCCGTTTG	5826	False	NA	NA	False	AATAAA	-10	NA	113320912	113311094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
Isoform_61492_54	chr6	-	2222	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	39	-11	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354805	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
Isoform_61495_125	chr6	-	1764	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-10	-11	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354347	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
Isoform_61499_34	chr6	-	1726	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-5	-11	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354483	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
Isoform_615_3	chr10	-	3293	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	-73	6	-73	1	multi-exon	FALSE	canonical	3	64	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATGTGATCGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	4338181	4317080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_61500_422	chr6	-	1710	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	497	641	-10	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354347	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_61502_14	chr6	-	1779	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	428	641	62	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354416	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_61503_11	chr6	-	2168	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	39	641	39	-11	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAAGTTATAAAA	NA	False	NA	7	True	AATAAA	-25	NA	113354805	113343626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_61507_9	chr6	-	1546	8	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-10	11	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	135.189662688976	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCGCAAGTTTAGTAT	NA	False	NA	-9	True	TATAAA	-4	NA	113354347	113343604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113344142_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
Isoform_61508_19	chr6	-	1238	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	-16	2	-4	-2	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAAAGCAGATGTTTA	NA	False	NA	-20	True	AATAAA	-30	NA	113396296	113392291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_61509_166	chr6	-	1259	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	5	5	-4	5	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGTTTACCAAGGA	NA	False	NA	-13	True	AATAAA	-37	NA	113396296	113392284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_6151_60	chr11	-	2236	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	51	-853	1	853	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	76134500	76111482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_61510_4	chr6	-	1336	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-3	5	intron_retention	FALSE	canonical	3	151	junction_2	16.318263212907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGTTTACCAAGGA	NA	False	NA	-13	True	AATAAA	-37	NA	113396295	113392284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_61511_3	chr6	-	1126	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	60.1922091371992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGAAAGCAGATGTT	NA	False	NA	-22	True	AATAAA	-28	NA	113396296	113392293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113392684_113393267_113393408_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_61512_3	chr6	-	1601	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-4	5	intron_retention	FALSE	canonical	3	157	junction_7	15.0373684193609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGTTTACCAAGGA	NA	False	NA	-13	True	AATAAA	-37	NA	113396296	113392284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113392684_113393267_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_61513_4	chr6	-	1110	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	61.7423877816496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGAAAGCAGATGTT	NA	False	NA	-22	True	AATAAA	-28	NA	113396296	113392293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
Isoform_61514_5	chr6	-	3389	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	34	1	-4	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4319	False	NA	0	True	AATAAA	-17	NA	113478858	113470886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
Isoform_61515_3	chr6	-	3449	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	-26	1	-26	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4259	False	NA	0	True	AATAAA	-17	NA	113478918	113470886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
Isoform_61516_3	chr6	-	3475	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204268.3	3741	4	-24	290	-14	-4	multi-exon	FALSE	canonical	2	4	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCATGCCTCGCTCTGG	4309	False	NA	-3	True	AATAAA	-14	NA	113478868	113470889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113473027_113473892_113474049_113474232_113475357_113478810
Isoform_61517_4	chr6	-	1738	3	NIC	ENSMUSG00000045009.10	novel	1903	3	NA	NA	4	-170	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAGGAA	4289	False	NA	NA	False	NA	NA	NA	113478888	113473430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113474046_113474232_113475278_113478810
Isoform_61518_287	chr6	-	1955	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	18	12	-16	-12	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTGAAAGTGTTGCT	NA	False	NA	-10	True	ATTAAA	-17	NA	113508595	113491846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
Isoform_61524_757	chr6	-	1302	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	44	7	28	-7	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTACTGTCATCCCACA	2221	False	NA	-17	True	AATAAA	-16	NA	113717660	113705029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
Isoform_61525_8	chr6	-	1256	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	19	78	3	-78	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTGGCCATTTTTA	8	True	NA	-88	True	NA	NA	NA	113717685	113705100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
Isoform_61526_9	chr6	-	1615	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	28	-9	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTACTGTCATCCCA	2221	False	NA	-19	True	AATAAA	-14	NA	113717660	113705031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
Isoform_61528_6	chr6	-	4381	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	113868303	113725253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_61529_12	chr6	-	2353	12	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	26	13872	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	6.72972928120791	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCAGTCTGTAA	NA	False	NA	NA	False	AATAAA	-27	NA	113868305	113766426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
Isoform_6153_148	chr11	-	1166	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	51	217	1	67	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTATATGGAATATTACT	NA	False	NA	-5	True	ATTAAA	-32	NA	76134500	76112552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_61530_7	chr6	-	722	4	FSM	ENSMUSG00000030315.16	ENSMUST00000152710.8	2198	4	8	1468	8	95	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAGAAAGAAAAAAA	7873	False	NA	NA	False	NA	NA	NA	114852060	114839056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114851999
Isoform_61531_20	chr6	-	1219	6	NIC	ENSMUSG00000030315.16	novel	1023	6	NA	NA	-10	95	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.489897948556636	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114946965	114839056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_114839398_114839716_114839841_114840844_114841041_114867577_114867768_114934896_114934973_114946673
Isoform_61534_6	chr6	-	1255	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	189.765480264457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115014837	114981349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
Isoform_61535_280	chr6	-	1144	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	16	8	-5	-1	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115014821	114981349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_61536_5	chr6	-	1311	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	41	-184	-10	184	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTGGCTATGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	115014796	114981157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
Isoform_61538_10	chr6	-	819	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2296	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115011522	114981349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
Isoform_61539_4	chr6	-	2365	4	ISM	ENSMUSG00000030316.14	ENSMUST00000154621.3	724	6	-61	14260	-10	815	5prime_fragment	FALSE	canonical	3	21	junction_2	197.90626288445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGCAAATGTTTC	NA	False	NA	1	True	ATTAAA	-21	NA	115014847	115007423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_115009274_115011116_115011212_115011911_115012095_115014610
Isoform_6154_5	chr11	-	1399	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	23	12	23	-12	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	76134528	76112347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
Isoform_61549_988	chr6	-	3021	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	26	23	26	5	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	988	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	8170	False	NA	-23	True	AATAAA	-20	NA	115653570	115595552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
Isoform_6156_4	chr11	-	1153	9	NIC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	-24	62	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	246.961915080038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGACAACTATATGGAATA	NA	False	NA	-10	True	ATTAAA	-27	NA	76134525	76112557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134413
Isoform_61564_5	chr6	-	706	3	ISM	ENSMUSG00000059900.15	ENSMUST00000127728.4	894	8	3847	-3	3847	1	3prime_fragment	FALSE	canonical	3	77	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115708065	115706100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_115706646_115707396_115707460_115707967
Isoform_61565_9	chr6	-	897	7	FSM	ENSMUSG00000059900.15	ENSMUST00000151849.2	927	7	423	-393	81	1	multi-exon	FALSE	canonical	3	40	junction_5	15.4344492037203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115711831	115706100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770
Isoform_61566_4	chr6	-	1352	12	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-977	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_9	21.3297603757274	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCGACTA	NA	False	NA	NA	False	AATAAA	-18	NA	115737209	115706103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115737065
Isoform_61567_3	chr6	-	1211	10	NIC	ENSMUSG00000059900.15	novel	843	11	NA	NA	-69	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	20.2319878739914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115739440	115706100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115739233
Isoform_61568_4	chr6	-	1143	10	NNC	ENSMUSG00000059900.15	novel	843	11	NA	NA	-975	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	21.1029223884592	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCGACTA	NA	False	NA	NA	False	AATAAA	-18	NA	115737207	115706103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115737065
Isoform_6157_3	chr11	-	2713	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-6	48	-6	-48	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGCCTCTCTGACCTC	NA	False	NA	NA	False	AATAAA	-8	NA	76289972	76148071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
Isoform_61572_31	chr6	-	1253	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	-347	0	52	0	multi-exon	FALSE	canonical	3	17944	junction_1	6	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785656	115782472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115782650_115783946_115784129_115784762
Isoform_61576_1028	chr6	-	506	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	4	7	4	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785704	115782472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
Isoform_61577_262	chr6	-	534	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	-24	7	-24	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785732	115782472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
Isoform_61579_32	chr6	-	793	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_3	8438.61374871489	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785656	115782472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785323
Isoform_6158_18	chr11	-	1994	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	0	761	0	-761	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTACTGTGTGCTTAGT	NA	False	NA	-6	True	NA	NA	NA	76289966	76148784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
Isoform_61584_41	chr6	-	3590	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	16	8	10	-8	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAAGGTCCCTTTGGC	7897	False	NA	NA	False	AATAAA	-13	NA	115830316	115817665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
Isoform_61588_10	chr6	-	2364	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	-6	17	-6	1	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTATCTATTTTACTT	NA	False	NA	-4	True	AATAAA	-19	NA	116605889	116601881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_116604095_116605738
Isoform_61589_84	chr6	-	2262	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	22	903	22	3	multi-exon	FALSE	canonical	3	68	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTATTTTACTTCT	NA	False	NA	-2	True	AATAAA	-21	NA	116605938	116601879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_116604095_116605891
Isoform_6159_10	chr11	-	1718	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111702	-758	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTGCTTAGTTTC	1430	False	NA	-3	True	NA	NA	NA	76178192	76148781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
Isoform_61590_6	chr6	-	987	10	FSM	ENSMUSG00000042129.9	ENSMUST00000203029.3	1243	10	-9	265	-9	-1	multi-exon	FALSE	canonical	3	13	junction_1	4.44722135470878	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAGAAGAGGAAG	8740	False	NA	NA	False	NA	NA	NA	116650779	116616449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
Isoform_61591_4	chr6	-	553	9	FSM	ENSMUSG00000004988.10	ENSMUST00000204214.3	550	9	0	-3	0	2	multi-exon	FALSE	canonical	1	3	junction_3	4.92442890089805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTCTTGTGACCCCT	2519	False	NA	NA	False	ATTAAA	-19	NA	117914296	117910517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912881_117913698_117913742_117914251
Isoform_61592_3	chr6	-	553	9	ISM	ENSMUSG00000004988.10	ENSMUST00000203082.3	815	10	358	0	1	0	3prime_fragment	FALSE	canonical	1	3	junction_3	4.29389100932942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTCTTGTGACCC	2520	False	NA	NA	False	ATTAAA	-17	NA	117914295	117910519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912884_117913698_117913742_117914251
Isoform_61593_14	chr6	-	3624	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	28	9	28	-9	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTAAATGAAAATGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	118116073	118084421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
Isoform_61594_103	chr6	-	4303	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	41	1	-21	-1	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCTAGTGATTTAT	8326	False	NA	-2	True	ATTAAA	-15	NA	118396394	118360342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
Isoform_61598_3	chr6	-	2383	21	ISM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-45	26470	-45	-9623	5prime_fragment	FALSE	canonical	3	23	junction_8	9.78979060041633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTGAAAAGAATGGAAAA	NA	False	NA	NA	False	AATAGA	-35	NA	118539232	118504738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
Isoform_61600_72	chr6	-	4143	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-45	-609	-45	-6	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365692	119330116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_61601_3	chr6	-	4180	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-82	-609	-82	-6	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365729	119330116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_61606_23	chr6	-	3982	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	190	12	-39	-12	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAAATGAGTTTTGTT	7515	False	NA	-12	True	AATAAA	-9	NA	119394475	119330122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
Isoform_61609_4	chr6	-	3942	7	NIC	ENSMUSG00000030168.14	novel	3489	8	NA	NA	-32	-6	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	42.0977698010503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTTTTGTTGTGTTT	NA	False	NA	-6	True	AATAAA	-15	NA	119365679	119330116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_119332890_119334176_119334371_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
Isoform_6161_28	chr11	-	5236	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	157	1	157	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6276	False	NA	-2	True	AATAAA	-35	NA	76462204	76307560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
Isoform_61611_29	chr6	-	2181	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-12	5	-12	-2	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTTTCTCTCCCTCTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	119426359	119409496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
Isoform_61612_5	chr6	-	2350	5	FSM	ENSMUSG00000030170.15	ENSMUST00000119369.2	2339	5	-10	-1	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	5.21416340365355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	119521289	119409493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119520941
Isoform_61613_4	chr6	-	2753	12	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-1	-22055	combination_of_known_junctions	FALSE	canonical	3	90	junction_8	10.6971843055131	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAGAAGAATGACAAAG	NA	False	NA	NA	False	NA	NA	NA	119825129	119720293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
Isoform_61619_100	chr6	-	2763	7	ISM	ENSMUSG00000045962.17	ENSMUST00000159397.8	5745	10	-52	15805	-4	99	5prime_fragment	FALSE	canonical	2	6	junction_4	3.590109871423	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAACAAGAAG	7171	False	NA	NA	False	NA	NA	NA	120015620	119946415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
Isoform_61624_8	chr6	-	5124	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-378	-1788	-378	1051	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCGGCTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	120271898	120178982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_61626_9	chr6	-	5129	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	-380	-1072	-380	1051	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCGGCTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	120271900	120178982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
Isoform_6163_5	chr11	-	6262	23	FSM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	6	3	6	-2	multi-exon	FALSE	canonical	3	102	junction_22	37.5075749925023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76514378	76307562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
Isoform_61630_4	chr6	-	2489	13	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.8387884757201	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTCAGGGCTCTACA	NA	False	NA	-19	True	AATAAA	-13	NA	120334359	120301288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
Isoform_61635_5	chr6	-	2514	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-2	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.4659133223415	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTCAGGGCTCTACA	NA	False	NA	-19	True	AATAAA	-13	NA	120334330	120301288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
Isoform_61638_222	chr6	-	1926	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	0	2	0	-2	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTGTCTTGTGAGGA	NA	False	NA	33	True	ATTAAA	-19	NA	120508280	120486456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_61639_16	chr6	-	1958	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	-30	0	-30	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508310	120486454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_6164_3	chr11	-	2142	5	ISM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	127	54569	127	-7065	5prime_fragment	FALSE	canonical	3	154	junction_4	50.5785280529199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCCCCCCAAAAAAAAGA	6246	False	NA	NA	False	NA	NA	NA	76462234	76362128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
Isoform_61640_5	chr6	-	2095	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	207	junction_2	17.2086864370552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTGTCTTGTGAGG	NA	False	NA	32	True	ATTAAA	-18	NA	120508282	120486457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_61641_317	chr6	-	1216	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	96	0	-5	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799658	120772204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
Isoform_61642_11	chr6	-	1307	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	3	2	3	-2	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTGTTGTTCCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	120799751	120772206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
Isoform_61643_7	chr6	-	1284	10	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	409.922214843526	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTAGTTGTTGTTCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	120799662	120772207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_120772726_120773358_120773426_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
Isoform_61646_9	chr6	-	2057	7	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	2	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893812	120870079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
Isoform_61647_397	chr6	-	1906	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	17	266	0	-266	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893797	120870080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
Isoform_61650_7	chr6	-	2160	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	29	0	12	0	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCACCAGTTATCATAA	NA	False	NA	NA	False	AGTAAA	-16	NA	120893785	120869814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
Isoform_61653_7	chr6	-	1899	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8888	-267	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.930964874214	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGAGAGCTGTAT	NA	False	NA	-28	True	AATAAA	-14	NA	120884871	120870081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884774
Isoform_61655_4	chr6	-	3519	21	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-72	-14812	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	16.1133485036475	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCACTTTACATCCTGC	NA	False	NA	NA	False	NA	NA	NA	121087126	120950115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_61656_3	chr6	-	2912	19	NIC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	23.4668797338812	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCCTTTAGTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	121087109	120984198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_120984391_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_61657_54	chr6	-	2828	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCCTTTAGTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	121087109	120984198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
Isoform_61664_143	chr6	-	3312	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	20	561	7	4	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9096	False	NA	-7	True	AATAAA	-18	NA	122316597	122295257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61665_11	chr6	-	3953	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-61	1	-11	-1	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCATTGTCTTACTGC	9015	False	NA	-20	True	ATTAAA	-33	NA	122316678	122294697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61666_61	chr6	-	3864	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	14	15	1	-3	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATGAAAGTTGGCCTC	9090	False	NA	-34	True	ATTAAA	-19	NA	122316603	122294711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61668_35	chr6	-	3520	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-185	558	-135	7	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCTAATCCAGTTTTTA	8891	False	NA	-4	True	AATAAA	-21	NA	122316802	122295254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61669_9	chr6	-	4035	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-145	3	-95	-3	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTCCATTGTCTTACT	8931	False	NA	-22	True	ATTAAA	-31	NA	122316762	122294699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_6167_59	chr11	-	4273	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	12	4	0	-4	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCATGTCTTTGGTTA	NA	False	NA	NA	False	AATAAA	-12	NA	76654393	76617431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
Isoform_61671_19	chr6	-	3388	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9116	False	NA	-7	True	AATAAA	-18	NA	122316577	122295257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_61672_12	chr6	-	3996	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	9071	False	NA	-17	True	ATTAAA	-36	NA	122316622	122294694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_61679_46	chr6	-	3730	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-6	-112	5	0	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	9083	False	NA	-19	True	ATTAAA	-34	NA	122316610	122294696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61680_87	chr6	-	3175	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-6	443	5	10	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCCAGTTTTTAAAC	9083	False	NA	-1	True	AATAAA	-24	NA	122316610	122295251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61682_15	chr6	-	3334	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-165	443	-102	10	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCCAGTTTTTAAAC	8924	False	NA	-1	True	AATAAA	-24	NA	122316769	122295251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61683_8	chr6	-	3368	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-205	449	-142	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8884	False	NA	-7	True	AATAAA	-18	NA	122316809	122295257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61684_19	chr6	-	3228	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-65	449	-2	4	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	9024	False	NA	-7	True	AATAAA	-18	NA	122316669	122295257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
Isoform_61686_9	chr6	-	3262	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_13	297.259673702081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	9083	False	NA	-10	True	AATAAA	-15	NA	122316610	122295260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_61687_7	chr6	-	3778	14	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_13	297.259673702081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	9131	False	NA	-19	True	ATTAAA	-34	NA	122316562	122294696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
Isoform_61693_6	chr6	-	2247	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-10	2488	-10	-1329	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCATGTTTGCATGA	9230	False	NA	-127	True	AATAAA	-15	NA	122463474	122432547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_61697_9	chr6	-	2023	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	214	2488	148	-1329	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCATGTTTGCATGA	9454	False	NA	-127	True	AATAAA	-15	NA	122463250	122432547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
Isoform_61698_45	chr6	-	2070	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	59	-4	59	4	multi-exon	FALSE	canonical	3	704	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTTAAGGTGTTTG	9906	False	NA	NA	False	NA	NA	NA	122586987	122582357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122584095_122586654
Isoform_61699_543	chr6	-	1222	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	59	844	59	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9906	False	NA	-27	True	AATAAA	-13	NA	122586987	122583205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122584095_122586654
Isoform_617_5	chr10	-	3220	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	6	0	6	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4338102	4317074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4319852_4324569_4324755_4337844
Isoform_6170_3	chr11	-	784	7	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	12	10558	0	-10558	5prime_fragment	FALSE	canonical	3	229	junction_5	30.259984578097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAGAAATTATGG	NA	False	NA	NA	False	NA	NA	NA	76654393	76627985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
Isoform_61701_32	chr6	-	1294	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-15	846	-15	-846	multi-exon	FALSE	canonical	3	704	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGGCTTATGCTCTC	9	True	NA	-29	True	AATAAA	-11	NA	122587061	122583207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122584095_122586654
Isoform_6171_11	chr11	-	4388	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-6	3564	-6	-3564	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	76737850	76672813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
Isoform_61725_7230	chr6	-	3718	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	15	3	2	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	7230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	-19	True	AATAAA	-14	NA	122719478	122704782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
Isoform_6173_13	chr11	-	1949	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	13	1152	13	-1152	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGAGTTTTTTTGGTT	NA	False	NA	-1	True	AATAAA	-18	NA	76969248	76936269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
Isoform_61750_92	chr6	-	3153	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-19	5	11	-5	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGACTGACGTGGG	NA	False	NA	-21	True	AATAAA	-24	NA	124392015	124373795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_61751_14	chr6	-	3234	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-98	3	-68	-3	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACTGACGTGGGTA	NA	False	NA	-19	True	AATAAA	-26	NA	124392094	124373793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_61752_7	chr6	-	3074	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_14	32.7566787083184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124391821	124373775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391725
Isoform_61753_221	chr6	-	3042	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	11	20	11	-5	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGACTGACGTGGG	NA	False	NA	-21	True	AATAAA	-24	NA	124392015	124373795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_61754_28	chr6	-	3142	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	-89	20	-89	-5	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGACTGACGTGGG	NA	False	NA	-21	True	AATAAA	-24	NA	124392115	124373795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
Isoform_61757_3	chr6	-	2166	7	NNC	ENSMUSG00000008153.13	novel	3703	18	NA	NA	369	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	17.0171482138851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTCTTGCTTGCTG	9622	False	NA	NA	False	AATAAA	-9	NA	124426762	124407723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415227_124415400_124415717_124415945_124426448
Isoform_61758_20	chr6	-	2418	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12554	5	-18	-5	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCTTGCTTGCTGT	9235	False	NA	NA	False	AATAAA	-10	NA	124427149	124407722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
Isoform_61760_12	chr6	-	3948	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	61	5	61	-5	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCTTGCTTGCTGT	8501	False	NA	NA	False	AATAAA	-10	NA	124441692	124407722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
Isoform_61762_607	chr6	-	1010	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	23	1	-14	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689118	124681344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_61764_29	chr6	-	1039	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	-6	1	-6	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689147	124681344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_61767_29	chr6	-	1308	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	1245	junction_4	117.50957407803	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689118	124681344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688838
Isoform_61769_12	chr6	-	1078	5	FSM	ENSMUSG00000004268.12	ENSMUST00000142187.8	917	5	-86	-75	-14	-1	multi-exon	FALSE	canonical	3	1245	junction_4	110.261904119238	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTTTCAGACCTGA	NA	False	NA	-16	True	TATAAA	-17	NA	124689118	124681345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124681622_124681901_124682180_124682477_124682620_124682703_124682806_124688838
Isoform_61773_192	chr6	-	2170	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	39	10	-5	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8769	False	NA	-10	True	AATAAA	-18	NA	124710078	124697679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
Isoform_61776_16	chr6	-	2169	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	45	12	-44	1	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCCTCCAAGTCTGT	8965	False	NA	-12	True	AATAAA	-16	NA	124715632	124697681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
Isoform_61777_7	chr6	-	2323	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	-107	10	-107	3	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8813	False	NA	-10	True	AATAAA	-18	NA	124715784	124697679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
Isoform_61778_16	chr6	-	2325	15	NIC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	9	1	intron_retention	FALSE	canonical	3	99	junction_9	22.8728740508695	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCCTCCAAGTCTGT	8783	False	NA	-12	True	AATAAA	-16	NA	124710064	124697681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
Isoform_61780_270	chr6	-	538	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	323	2	14	1	multi-exon	FALSE	canonical	3	807	junction_1	71.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTGTCAGTCATTT	9266	False	NA	NA	False	AATAAA	-15	NA	124718014	124716147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_61781_8	chr6	-	773	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	88	2	88	1	multi-exon	FALSE	canonical	3	807	junction_1	71.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTGTCAGTCATTT	9031	False	NA	NA	False	AATAAA	-15	NA	124718249	124716147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_61782_11	chr6	-	593	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	267	3	-42	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9210	False	NA	NA	False	AATAAA	-14	NA	124718070	124716148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124716377_124717481_124717659_124717882
Isoform_61785_32	chr6	-	2353	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	32	junction_12	9.04118662320138	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTGAGGACTCTT	9982	False	NA	-2	True	ATTAAA	-21	NA	124746520	124737323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_61786_3	chr6	-	2423	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	32	junction_12	9.04118662320138	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTTGTCTGAGGACT	9909	False	NA	-5	True	ATTAAA	-18	NA	124746593	124737326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_61787_6	chr6	-	2640	13	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	32	junction_12	9.04118662320138	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGCTGAACTAAGGAT	10001	False	NA	-3	True	NA	NA	NA	124746501	124737017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
Isoform_61788_4	chr6	-	2538	11	NNC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-30	-2	intron_retention	FALSE	non_canonical	3	34	junction_1	8.87975224879613	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACCCCTTGTCTGAGG	8646	False	NA	-8	True	ATTAAA	-15	NA	124745369	124737329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124737707_124737726_124738326_124738610_124738670_124739615_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200
Isoform_6179_42	chr11	-	1378	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	78	7	78	-7	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404118	77398931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_61792_1078	chr6	-	1340	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	123	0	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791121	124787677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_61793_88	chr6	-	1378	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	99	124	-39	-124	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTGGGTTGTCATAA	NA	False	NA	-8	True	AATAAA	-13	NA	124791160	124787678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_61794_25	chr6	-	1465	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	-2	0	2	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTTTGTCCCAGGC	NA	False	NA	-21	True	AATACA	-18	NA	124791121	124787552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
Isoform_61796_38	chr6	-	3154	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	43	16	-6	3	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7899	False	NA	-24	True	AATACA	-12	NA	124806404	124791997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_61798_29	chr6	-	3031	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7899	False	NA	-24	True	AATACA	-12	NA	124806404	124791997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_6180_9	chr11	-	1466	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	-11	8	-11	-8	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404207	77398932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_61802_1066	chr6	-	3085	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-6	-3	-6	3	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7899	False	NA	-24	True	AATACA	-12	NA	124806404	124791997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_61803_155	chr6	-	3121	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-42	-3	7	3	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7863	False	NA	-24	True	AATACA	-12	NA	124806440	124791997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
Isoform_61807_3	chr6	-	2822	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	27	1	4	-1	multi-exon	FALSE	canonical	1	4	junction_14	4.42396073348629	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGGTCTGCTCTATCC	5510	False	NA	NA	False	AATAAA	-26	NA	124834688	124818052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
Isoform_61808_5	chr6	-	2693	5	FSM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	-18	1	-18	-1	multi-exon	FALSE	canonical	1	2	junction_4	3.56195171219375	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGATGTTCAGCGTTTG	NA	False	NA	-1	True	ATTAAA	-20	NA	124840898	124835407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781_124839086_124840633
Isoform_6181_4	chr11	-	1309	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-7	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	68.0458668840364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404118	77398931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403985
Isoform_61810_507	chr6	-	1148	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	0	1	0	-1	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTCTCCTGCTTTCCCG	NA	False	NA	-7	True	AATAAA	-25	NA	124894909	124890644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
Isoform_61811_40	chr6	-	1200	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	-52	1	-52	-1	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTCTCCTGCTTTCCCG	NA	False	NA	-7	True	AATAAA	-25	NA	124894961	124890644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
Isoform_61816_22	chr6	-	1191	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	607	3	276	-3	3prime_fragment	FALSE	canonical	3	371	junction_1	536.799051994526	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATGTATGCCAGGA	NA	False	NA	-19	True	ATTAAA	-10	NA	124941894	124935378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686
Isoform_61817_29	chr6	-	1199	8	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	24	-40	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	695.556714335461	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942229	124935415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
Isoform_61819_250	chr6	-	1260	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	28	40	2	-40	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942473	124935415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_6182_15	chr11	-	1454	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	81	-7	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404115	77398931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
Isoform_61826_89	chr6	-	1693	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	28	-4	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942225	124935782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
Isoform_6183_7	chr11	-	4037	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-63	8435	-63	-8435	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTGGCTTAA	8088	False	NA	NA	False	AATAGA	-23	NA	77498704	77428422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
Isoform_61834_573	chr6	-	1760	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942475	124935782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_61835_68	chr6	-	2166	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTATGCCAGGAGATT	NA	False	NA	-15	True	ATTAAA	-14	NA	124942473	124935374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_61836_31	chr6	-	1783	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942498	124935782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_61840_15	chr6	-	1767	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942232	124935782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
Isoform_61846_133	chr6	-	1921	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	26	407	0	-4	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGGAACTGGGCC	NA	False	NA	-13	True	AATAAA	-22	NA	124942475	124935782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
Isoform_61851_9	chr6	-	1229	6	NIC	ENSMUSG00000057666.19	novel	1273	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	832	junction_5	4068.19726168729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125141886	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141815
Isoform_61852_4	chr6	-	1428	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	204	junction_5	3916.70276933715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142059_125142275_125142514
Isoform_61853_12	chr6	-	1370	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	245	junction_5	3903.40606251629	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142117_125142275_125142514
Isoform_61854_4	chr6	-	1254	6	ISM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	407	-1	210	0	3prime_fragment	FALSE	canonical	3	6089	junction_1	2018.75426934533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142329	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233
Isoform_61855_3	chr6	-	1486	6	ISM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	175	-1	5	0	intron_retention	FALSE	canonical	3	6089	junction_1	2018.75426934533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142561	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233
Isoform_61856_53	chr6	-	1398	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	23	-1	23	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142713	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_61857_4	chr6	-	1320	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	168	-68	0	67	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTTTGTGCATGTATC	NA	False	NA	52	True	NA	NA	NA	125142568	125138748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_61859_4	chr6	-	1273	7	NNC	ENSMUSG00000057666.19	novel	1273	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	4003.91573615407	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125143450	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143376
Isoform_61860_7	chr6	-	3089	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	6089	junction_1	2110.23520963896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGGTTTTAATGCGG	NA	False	NA	-13	True	AATAAA	-17	NA	125142568	125138813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125142275_125142514
Isoform_61861_4	chr6	-	1387	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	1692.66445582106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139357_125139440_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_61862_13	chr6	-	1337	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	1950.20942465162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_61863_4	chr6	-	3171	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	2149.62629019558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142568	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125142275_125142514
Isoform_61864_4	chr6	-	1472	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	6089	junction_1	1441.13000367767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125140004_125140101_125140400_125142233_125142275_125142514
Isoform_61865_4	chr6	-	3402	3	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6089	junction_1	1017.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142567	125138815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125139065_125139174_125142275_125142514
Isoform_61866_4	chr6	-	3512	2	FSM	ENSMUSG00000057666.19	ENSMUST00000144588.2	769	2	2	-2745	0	1	multi-exon	FALSE	canonical	3	8124	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142566	125138814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125142275_125142514
Isoform_61873_17	chr6	-	4542	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-21	-1	combination_of_known_junctions	TRUE	canonical	3	50	junction_31	121.390529984967	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	3585	False	NA	-10	True	AATAAA	-19	NA	125168474	125144970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
Isoform_61874_81	chr6	-	4485	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	143	1	45	-1	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	3538	False	NA	-10	True	AATAAA	-19	NA	125168521	125144970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_61875_39	chr6	-	4631	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	-3	1	-3	-1	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTGTCCTGGCTGGT	3392	False	NA	-10	True	AATAAA	-19	NA	125168667	125144970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_61877_6	chr6	-	5041	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	-416	4	-416	-4	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCATCCTGTCCTGGCT	2979	False	NA	-13	True	AATAAA	-16	NA	125169080	125144973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_61879_7	chr6	-	2665	17	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	24	7854	24	-12	5prime_fragment	FALSE	canonical	3	436	junction_6	45.8580946371521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAAAAACAAA	3419	False	NA	NA	False	TTTAAA	-26	NA	125168640	125152823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_6188_4	chr11	-	1878	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	119	1	119	-1	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGGTGGTCTTTATT	NA	False	NA	-3	True	AATAAA	-21	NA	77784803	77771441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_61880_16	chr6	-	2532	17	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	157	7854	-54	-12	5prime_fragment	FALSE	canonical	3	436	junction_6	45.8580946371521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAAAAACAAA	3552	False	NA	NA	False	TTTAAA	-26	NA	125168507	125152823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_61881_5	chr6	-	1489	10	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	143	12748	45	-3541	5prime_fragment	FALSE	canonical	3	466	junction_4	45.0998891351187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTATGAGTGTTT	3538	False	NA	NA	False	NA	NA	NA	125168521	125157717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
Isoform_61882_8	chr6	-	2074	7	FSM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	-10	288	-10	-288	multi-exon	FALSE	canonical	1	1	junction_3	4.61880215351701	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	8503	False	NA	NA	False	NA	NA	NA	125208833	125201183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517_125207761_125208496
Isoform_61884_282	chr6	-	1491	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	4	14	4	-14	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCTAGACTGAGGCAT	3465	False	NA	-22	True	AATAAA	-14	NA	125263001	125255250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
Isoform_61885_204	chr6	-	1521	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-28	16	-28	-16	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCTAGACTGAGGC	3433	False	NA	-24	True	AATAAA	-12	NA	125263033	125255252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
Isoform_61886_43	chr6	-	2080	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	27	0	27	0	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	False	NA	0	True	AATAAA	-21	NA	125290821	125283533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
Isoform_61887_4	chr6	-	2165	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	-60	2	-60	-2	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCTTGGGTTTTATGT	NA	False	NA	-2	True	AATAAA	-19	NA	125290908	125283535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
Isoform_61889_6	chr6	-	3036	17	FSM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	272	-9	272	9	multi-exon	FALSE	canonical	0	0	junction_7	3.59198326137525	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGGTGAACACTGGA	NA	False	NA	NA	False	TATAAA	-17	NA	125357484	125339613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
Isoform_6189_9	chr11	-	2074	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	264	0	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784658	77771440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_61895_3308	chr6	-	1157	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	71	0	71	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	3308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	False	NA	-10	True	AATAAA	-15	NA	125471683	125437228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
Isoform_61896_148	chr6	-	1228	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	0	0	0	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9966	False	NA	-10	True	AATAAA	-15	NA	125471754	125437228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
Isoform_619_43	chr10	-	1816	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	64	1259	10	-3	multi-exon	FALSE	canonical	3	107	junction_3	17.5220099684178	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATCCTTTCAGCTCTT	5726	False	NA	-8	True	NA	NA	NA	4382324	4353173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
Isoform_6190_4	chr11	-	2127	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	212	1	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTGGTCTTTATTTT	NA	False	NA	-1	True	AATAAA	-23	NA	77784710	77771439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
Isoform_61905_1147	chr6	-	1212	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	0	233	0	42	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	1147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126826088	126798916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
Isoform_61909_32	chr6	-	1835	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	30	368	-11	-3	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5295	False	NA	-8	True	AATAAA	-18	NA	126916520	126900380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_61910_3	chr6	-	1598	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	5	630	5	-265	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATGCTCATTGATACCA	5270	False	NA	-19	True	AATAAA	-15	NA	126916545	126900642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_61911_24	chr6	-	1880	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-12	3	-12	-3	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5253	False	NA	-8	True	AATAAA	-18	NA	126916562	126900380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_61913_3	chr6	-	1676	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-68	263	-68	-263	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCTCATTGATACCATG	5197	False	NA	-17	True	AATAAA	-17	NA	126916618	126900640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_61914_4	chr6	-	2294	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	5	-6	intron_retention	FALSE	canonical	3	195	junction_2	26.1635359277927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGTGCATGCCTCGC	5286	False	NA	-11	True	AATAAA	-15	NA	126916529	126900383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
Isoform_61917_230	chr6	-	1297	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2354	0	411	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086513	127064432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
Isoform_61918_28	chr6	-	1363	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2288	0	477	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAACTAGCTCTTGGGA	NA	False	NA	56	True	NA	NA	NA	127086513	127064366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
Isoform_6192_271	chr11	-	1999	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	13	2	13	-2	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTATCTTTTATTTCT	NA	False	NA	-4	True	AATAAA	-20	NA	77971196	77964203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_61925_3	chr6	-	2701	10	FSM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	13	10	13	-10	multi-exon	FALSE	canonical	1	4	junction_7	3.18948890986829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAAGAAGCAATGAGTA	NA	False	NA	-8	True	AATAAA	-7	NA	127746422	127665983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
Isoform_61928_116	chr6	-	3909	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-2	-2502	1	-9	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	6164	False	NA	-11	True	AATAAA	-17	NA	128120525	127938367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
Isoform_61931_5	chr6	-	3825	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	-15	9	-15	-9	multi-exon	FALSE	canonical	0	0	junction_7	35.3305094494713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	6148	False	NA	-11	True	AATAAA	-17	NA	128120541	127938367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
Isoform_61932_3	chr6	-	3926	8	NNC	ENSMUSG00000030352.16	novel	3819	8	NA	NA	-42674	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	33.9807868883435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAACCAGACTGTTA	NA	False	NA	-11	True	AATAAA	-17	NA	128054642	127938367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128054476
Isoform_61933_5	chr6	-	3065	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	11	0	11	0	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1368	False	NA	-7	True	NA	NA	NA	128277765	128204105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61934_12	chr6	-	2695	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	380	1	305	-1	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGTGAGAACTTCAACT	1737	False	NA	-8	True	NA	NA	NA	128277396	128204106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61937_10	chr6	-	2782	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	297	-3	222	3	multi-exon	TRUE	canonical	3	52	junction_4	17.0405447474327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGAACTTCAACTCCAG	1654	False	NA	-4	True	NA	NA	NA	128277479	128204102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61938_15	chr6	-	1693	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	342	1041	267	-3	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGAGGAGCTAGTTT	1699	False	NA	-8	True	AATAAA	-16	NA	128277434	128205146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61939_5	chr6	-	1768	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	264	1044	189	-6	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTTCAGAGGAGCTAG	1621	False	NA	-11	True	AATAAA	-13	NA	128277512	128205149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61940_3	chr6	-	2613	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	10826	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.7632111220146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTGAGAACTTCAACTCC	NA	False	NA	-6	True	NA	NA	NA	128266875	128204104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128266820
Isoform_61941_9	chr6	-	2681	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	267	-1039	192	1	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTGAGAACTTCAACTCC	1624	False	NA	-6	True	NA	NA	NA	128277509	128204104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
Isoform_61946_74	chr6	-	3353	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	17	4	7	-4	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTCGCTTTCCCAGAA	7508	False	NA	-24	True	AATAAA	-14	NA	128332797	128298127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
Isoform_61948_3	chr6	-	1600	4	FSM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	95	320	-22	40	multi-exon	FALSE	canonical	3	13	junction_3	145.265274584121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGCCTCGAACTAAT	625	False	NA	-3	True	TATAAA	-17	NA	128339680	128334282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330
Isoform_6195_11	chr11	-	2115	9	FSM	ENSMUSG00000020832.15	ENSMUST00000139731.8	2131	9	11	5	11	-5	multi-exon	FALSE	canonical	3	178	junction_7	16.6466025062173	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTCTTATCTTTTATT	NA	False	NA	-7	True	AATAAA	-17	NA	77971198	77964206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_77965001_77965105_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_61950_20	chr6	-	1282	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	37	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCTGCCTCGAACT	469	False	NA	-6	True	TATAAA	-14	NA	128339836	128334285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
Isoform_61951_4	chr6	-	1467	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	154	-37	-19	37	multi-exon	FALSE	canonical	3	41	junction_2	149.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCTGCCTCGAACT	628	False	NA	-6	True	TATAAA	-14	NA	128339677	128334285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128335157_128336068_128336318_128339330
Isoform_61952_10	chr6	-	1582	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_2	149.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCCTCGTGCCCATC	474	False	NA	-9	True	AATAAA	-39	NA	128339831	128334324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128335157_128336068_128336318_128339330
Isoform_61953_72	chr6	-	1128	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-16	-4	-16	-1	multi-exon	FALSE	canonical	3	139	junction_2	100.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCGTGCCCATCT	458	False	NA	-8	True	AATAAA	-40	NA	128339847	128334323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128335157_128336068_128336318_128339801
Isoform_61955_3	chr6	-	1240	3	NNC	ENSMUSG00000048668.17	novel	1584	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCCTCGTGCCCATC	474	False	NA	-9	True	AATAAA	-39	NA	128339831	128334324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_128335157_128336068_128336318_128339672
Isoform_61956_545	chr6	-	2286	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	34	0	15	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401860	128386406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
Isoform_61961_10	chr6	-	2135	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	13	junction_8	79.0465685529739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401881	128386409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
Isoform_61964_16	chr6	-	2383	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	237	junction_2	19.4216374180963	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCTCTCCAATCTGGA	NA	False	NA	-1	True	AATAAA	-23	NA	128401883	128386407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
Isoform_61965_10	chr6	-	775	4	ISM	ENSMUSG00000001518.13	ENSMUST00000203026.2	655	6	-5	1989	0	1	5prime_fragment	FALSE	canonical	3	279	junction_3	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	128401881	128392591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_128393028_128393219_128393262_128394579_128394676_128401680
Isoform_61966_8	chr6	-	970	3	ISM	ENSMUSG00000001518.13	ENSMUST00000203853.3	724	7	-9	2622	-3	1	5prime_fragment	FALSE	canonical	3	279	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	128401884	128392591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_128393262_128394579_128394676_128401680
Isoform_6197_5	chr11	-	2222	8	NIC	ENSMUSG00000020832.15	novel	2131	9	NA	NA	11	-3	intron_retention	FALSE	canonical	3	178	junction_6	17.7580105522975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTATCTTTTATTTC	NA	False	NA	-5	True	AATAAA	-19	NA	77971198	77964204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
Isoform_6198_224	chr11	-	2042	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	30	6	30	-6	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78056385	78050231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
Isoform_61980_3916	chr6	-	2195	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	19	3	19	-3	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	3916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGTGTCAGGCAAC	9288	False	NA	-24	True	AATAAA	-13	NA	128415621	128407068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
Isoform_6199_836	chr11	-	2012	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	60	6	-13	-6	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78056355	78050231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
Isoform_61991_6	chr6	-	635	7	ISM	ENSMUSG00000030359.15	ENSMUST00000112132.8	4681	36	38795	6	-70	-6	3prime_fragment	FALSE	canonical	3	30	junction_1	17.1464281994822	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGGGTTTTTTTTTC	NA	False	NA	-1	True	AATAAA	-14	NA	128464888	128460535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464843
Isoform_61993_8	chr6	-	756	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	13	-2	13	2	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAATAGGTATTTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	131270194	131261348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
Isoform_61995_3	chr6	-	1074	5	ISM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	12298	7	2101	-7	3prime_fragment	FALSE	canonical	3	2150	junction_4	421.086318348151	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGGCTGTGTAACTA	480	False	NA	-16	True	AATAAA	-14	NA	131353103	131341824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936
Isoform_61997_3	chr6	-	962	2	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53548	-6543	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326830	134292456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_134293294_134326705
Isoform_61999_3	chr6	-	5034	22	NIC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	21.8155533357955	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGCATCACTGACC	NA	False	NA	NA	False	NA	NA	NA	134543928	134427430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134543605
Isoform_62_13635	ERCC-00074	+	505	1	FSM	ERCC-00074A	DQ516754	506	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13635	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00074_+_0_500
Isoform_62000_8	chr6	-	2289	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	90	-3	90	3	multi-exon	TRUE	canonical	3	7	junction_1	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGATAGCTTTCAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	134609361	134586166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
Isoform_62001_16	chr6	-	5199	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-95	0	-95	0	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769683	134692435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
Isoform_62004_4	chr6	-	1554	3	FSM	ENSMUSG00000032641.19	ENSMUST00000215088.2	1484	3	-67	-3	-20	-2	multi-exon	FALSE	canonical	3	13	junction_1	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134864815	134846121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_134847407_134863853_134863900_134864592
Isoform_62005_3	chr6	-	1604	5	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.3664085533089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGAGAATTGATTTAC	NA	False	NA	-22	True	ATTAAA	-13	NA	134874861	134846123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_134847407_134863853_134863900_134864592_134864749_134874124_134874177_134874794
Isoform_62006_7	chr6	-	1578	2	ISM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	9954	5	-29	-5	3prime_fragment	FALSE	canonical	3	94	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATGGTTCCTGTGGAT	NA	False	NA	-8	True	ACTAAA	-29	NA	134864824	134846060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_134847407_134864592
Isoform_62007_24	chr6	-	1531	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134874832	134846121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
Isoform_62008_11	chr6	-	1586	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATTGATTATGGTTCCT	NA	False	NA	-14	True	ACTAAA	-23	NA	134874832	134846066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
Isoform_62009_3	chr6	-	1617	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	9997	-10	-29	-5	3prime_fragment	FALSE	canonical	3	36	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATGGTTCCTGTGGAT	NA	False	NA	-8	True	ACTAAA	-29	NA	134864824	134846060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_134847446_134864592
Isoform_62010_6	chr6	-	1550	2	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	10009	45	-17	4	3prime_fragment	FALSE	canonical	3	36	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGATTTACTTAGTTTT	NA	False	NA	-14	True	ATTAAA	-21	NA	134864812	134846115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_134847446_134864592
Isoform_62011_3	chr6	-	1662	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-41	-11	-12	-4	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTTCCTGTGGATT	NA	False	NA	-7	True	ACTAAA	-30	NA	134874862	134846059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
Isoform_62012_13	chr6	-	1581	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-22	51	7	-2	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAATTGATTTACTT	NA	False	NA	-20	True	ATTAAA	-15	NA	134874843	134846121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
Isoform_62013_447	chr6	-	988	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	62	8	-18	-8	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGGAGACAGTTTT	NA	False	NA	-37	True	AATACA	-12	NA	135145151	135114527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
Isoform_62014_115	chr6	-	1041	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	20	-3	-3	3	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTTAAATTATTTCC	NA	False	NA	-26	True	AATACA	-23	NA	135145193	135114516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
Isoform_62017_47	chr6	-	1933	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	70	7	15	-7	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCATCTGTGGTCCTGC	NA	False	NA	-7	True	AATAAA	-10	NA	136638856	136589074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_62018_4	chr6	-	2270	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-262	2	-262	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	136639188	136589069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_62019_10	chr6	-	2089	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-81	2	-81	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	136639007	136589069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
Isoform_62023_417	chr6	-	2647	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	87	5	-3	-5	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCTTCTGTGTTTGTG	2919	False	NA	-6	True	AATAAA	-14	NA	136805144	136790656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
Isoform_62032_7	chr6	-	1153	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	40	0	40	0	multi-exon	FALSE	canonical	3	8	junction_3	3.18747549010185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	5611	False	NA	NA	False	AATAAA	-20	NA	136918714	136900652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
Isoform_62033_52	chr6	-	2230	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	33	-1	9	1	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTTGGAATTCTTTT	NA	False	NA	-11	True	AATAAA	-15	NA	137146697	137031827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
Isoform_62038_22	chr6	-	4118	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	21	428	21	-5	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAGAATGTTTGCTTGG	4019	False	NA	-5	True	AATAAA	-42	NA	137626262	137454670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
Isoform_6204_13	chr11	-	2095	6	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	463	junction_3	28.6258624324229	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78056369	78050231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
Isoform_62041_5	chr6	-	4044	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGCTTGGTAGAAT	4019	False	NA	1	True	AATAAA	-24	NA	137626262	137454664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
Isoform_62044_5	chr6	-	3505	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-5	2	intron_retention	TRUE	canonical	3	14	junction_14	37.9085903785645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAGACCTATCTTAGA	6226	False	NA	NA	False	AATAAA	-28	NA	142332767	142307099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
Isoform_62045_29	chr6	-	2601	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	14	774	1	-29	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6194	False	NA	-28	True	ATTAAA	-11	NA	142332799	142307875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_62046_14	chr6	-	2853	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	13	523	0	222	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGTTTCACCAATTAAG	6193	False	NA	-1	True	ATTAAA	-20	NA	142332800	142307624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_62048_9	chr6	-	3355	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	28	6	15	-6	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAAGAGGAGACCT	6208	False	NA	NA	False	AATAAA	-20	NA	142332785	142307107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
Isoform_62049_4	chr6	-	2813	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	223	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTTCACCAATTAAGA	6186	False	NA	0	True	ATTAAA	-21	NA	142332807	142307623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
Isoform_62054_1199	chr6	-	1268	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	22	-3	22	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453647	142435974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_62055_22	chr6	-	2751	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	22	0	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453647	142435974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_62056_18	chr6	-	1144	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	308.522104376476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453647	142435974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142436331_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
Isoform_62059_9	chr6	-	4320	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	20.7068684257181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045577	142956650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
Isoform_6206_38	chr11	-	2784	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	25	0	-16	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6273	False	NA	0	True	AATAAA	-14	NA	78067476	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62060_25	chr6	-	4460	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTAACTCTTTGCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	143045854	142956651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_62063_5	chr6	-	4299	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	4	junction_26	34.3139007835345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACACATTCCTAACTCT	NA	False	NA	NA	False	AATAAA	-10	NA	143045866	142956659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
Isoform_62064_4	chr6	-	4353	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	-50	-809	-14	1	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTCTTTGCCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	143045847	142956649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_62065_4	chr6	-	4157	24	FSM	ENSMUSG00000030279.16	ENSMUST00000204655.3	3526	24	-75	-556	7	-1	multi-exon	FALSE	canonical	3	38	junction_3	28.8381180218075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTAACTCTTTGCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	143045568	142956651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
Isoform_62066_8	chr6	-	4332	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	-47	7	-13	1	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045880	142956652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_62067_8	chr6	-	4271	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	14	7	-3	1	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045819	142956652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_62068_4	chr6	-	3562	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	-1	1023	-1	-1023	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATGTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	143045834	142974061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
Isoform_6207_48	chr11	-	2762	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	47	0	-1	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62083_208	chr6	-	2517	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-4	5320	-4	3	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	NA	False	NA	-21	True	AATAAA	-19	NA	144994542	144944880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
Isoform_62086_4158	chr6	-	2423	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	136	-3	136	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	4158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8621	False	NA	-21	True	AATAAA	-19	NA	145021774	144944880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_62087_2586	chr6	-	2473	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	86	-3	86	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8571	False	NA	-21	True	AATAAA	-19	NA	145021824	144944880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_62089_176	chr6	-	2598	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	-39	-3	-39	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8446	False	NA	-21	True	AATAAA	-19	NA	145021949	144944880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_62092_155	chr6	-	2880	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	-321	-3	-321	3	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8164	False	NA	-21	True	AATAAA	-19	NA	145022231	144944880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
Isoform_621_3	chr10	-	2704	3	FSM	ENSMUSG00000019763.12	ENSMUST00000155172.8	776	3	-14	-1914	-8	765	multi-exon	FALSE	canonical	3	35	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCTTTTCCAATGTCT	5741	False	NA	NA	False	AATAGA	-13	NA	4382309	4375328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4377692_4379076_4379172_4382063
Isoform_6210_3	chr11	-	2783	15	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	17.802917669613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6264	False	NA	0	True	AATAAA	-14	NA	78067485	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067395
Isoform_62115_7	chr6	-	4667	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	8	3	8	-3	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTAATTATGTAGT	NA	False	NA	-11	True	AATAAA	-19	NA	145195957	145162427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_62116_100	chr6	-	1899	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	0	2779	0	502	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195965	145165203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_62117_6	chr6	-	1951	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-52	2779	-52	502	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145196017	145165203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_62118_5	chr6	-	2099	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-200	2779	-200	502	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145196165	145165203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
Isoform_6212_18	chr11	-	2612	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	14.9114734622815	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78062065_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62127_3	chr6	-	2967	18	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	73.2670141559065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479288	146451130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_62129_47	chr6	-	3013	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	45	1	-10	-1	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479288	146451130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_6213_49	chr11	-	2899	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	-17	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6295	False	NA	0	True	AATAAA	-14	NA	78067454	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62130_4	chr6	-	2881	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	57.4303586420109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCGGAGTGTTACTTTA	NA	False	NA	-3	True	AATAAA	-25	NA	146479280	146451130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_62132_28	chr6	-	2988	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATCGGAGTGTTACT	NA	False	NA	-6	True	AATAAA	-22	NA	146479344	146451133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_62133_88	chr6	-	2933	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	False	NA	-5	True	AATAAA	-23	NA	146479288	146451132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
Isoform_62134_4	chr6	-	2506	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	335	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	63.7024332345319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCCAAGTATCGGAGT	NA	False	NA	-12	True	AATAAA	-16	NA	146478943	146451139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
Isoform_62137_456	chr6	-	3204	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	30	7	30	-7	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCTTAATGTCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	146536065	146503856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
Isoform_62145_6	chr6	-	3344	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	338	492	-14	-492	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCCTGTTCAATCTAC	NA	False	NA	9	True	AATAAA	-41	NA	148113534	148081068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_62146_40	chr6	-	2857	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	352	965	0	-965	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTTAAAGCAAACTTT	NA	False	NA	-13	True	ATTAAA	-16	NA	148113520	148081541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_6215_5	chr11	-	2997	13	FSM	ENSMUSG00000017405.15	ENSMUST00000131015.8	2561	13	-21	-415	-14	0	multi-exon	FALSE	canonical	3	30	junction_7	9.49085817452189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6275	False	NA	0	True	AATAAA	-14	NA	78067474	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62154_5	chr6	-	2786	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-965	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTTAAAGCAAACTTT	NA	False	NA	-13	True	ATTAAA	-16	NA	148113520	148081541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
Isoform_62155_3	chr6	-	5351	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	0	-3	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	45.5182350517045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGTCTGCTCTATGG	NA	False	NA	-4	True	AATAAA	-24	NA	148732962	148672183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_62156_4	chr6	-	3703	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	9	-1632	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	45.5182350517045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACCTTGGTTATGTCA	NA	False	NA	NA	False	CATAAA	-19	NA	148732953	148673822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_62158_19	chr6	-	5350	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	3	7	0	1	multi-exon	FALSE	canonical	3	188	junction_1	23.3505516827524	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAACTCTGTCTGCTCT	NA	False	NA	-8	True	AATAAA	-20	NA	148732962	148672187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
Isoform_6216_3	chr11	-	3299	13	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	19	0	intron_retention	FALSE	canonical	3	30	junction_6	8.98571397027279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6267	False	NA	0	True	AATAAA	-14	NA	78067482	78056931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
Isoform_62161_17	chr6	-	3639	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	55	3	-20	-2	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-11	NA	148797680	148743992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
Isoform_62162_10	chr6	-	2985	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-32	-1	-20	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797680	148743989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
Isoform_62165_22	chr6	-	2697	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	31	9	17	-9	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148846293	148822563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
Isoform_62167_14	chr6	-	2599	6	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148847653	148822563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
Isoform_6217_5	chr11	-	1389	3	ISM	ENSMUSG00000017405.15	ENSMUST00000142812.8	2876	4	-42	1607	19	-411	5prime_fragment	FALSE	canonical	3	45	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTAAT	6267	False	NA	NA	False	NA	NA	NA	78067482	78062423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_78063510_78063750_78063957_78067385
Isoform_62170_887	chr6	-	2637	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	29	31	5	-9	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148847936	148822563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
Isoform_62172_23	chr6	-	2695	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	-29	31	-29	-9	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGTTGTCTCATG	NA	False	NA	NA	False	AATAAA	-16	NA	148847994	148822563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
Isoform_62176_5	chr14	+	330	1	FSM	ENSMUSG00000115684.2	ENSMUST00000227446.2	663	1	-120	453	-120	-453	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTGGAATCACGT	2573	False	NA	NA	False	NA	NA	NA	119515715	119516045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr14_+_119515700_119516000
Isoform_62177_4	chr6	-	1130	7	NIC	ENSMUSG00000068250.14	novel	1369	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	33.0840680019183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090185	149059080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
Isoform_62178_25	chr6	-	998	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	21	438	-4	-2	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTCTATTGTCCCATA	NA	False	NA	-8	True	TATAAA	-22	NA	149090189	149059082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
Isoform_62179_5	chr6	-	888	6	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	34.1607962436475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGTCCCATATTTATT	NA	False	NA	-2	True	TATAAA	-28	NA	149090206	149059076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
Isoform_62180_3	chr6	-	731	5	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	42.3932482831877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTCTATTGTCCCATA	NA	False	NA	-8	True	TATAAA	-22	NA	149090200	149059082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149090103
Isoform_62181_25	chr6	-	958	7	NNC	ENSMUSG00000058979.8	novel	1882	3	NA	NA	0	-3387	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	80.8386596183341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	120508280	120489841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_120490030_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
Isoform_62182_16	chr6	-	1000	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-5	-14475	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTGCCAAGCCCC	NA	False	NA	NA	False	NA	NA	NA	88423489	88289562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
Isoform_62183_5	chr6	-	1504	2	Genic_Genomic	ENSMUSG00000080932.4	novel	615	1	NA	NA	-8277	48	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	122684264	122675324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_122676037_122683472
Isoform_62184_8	chr6	-	1592	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-3	-29224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACTTGCGCAAATAGC	NA	False	NA	NA	False	AATAAA	-19	NA	100648121	100579267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
Isoform_62185_7	chr6	-	1694	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGATGACTTAGCCTGG	835	False	NA	-9	True	AATAAA	-16	NA	51989522	51836147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
Isoform_62186_4	chr6	-	658	3	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGCTTGTGTGCATT	NA	False	NA	NA	False	AGTAAA	-17	NA	48999400	48995451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_48995945_48997387_48997456_48999303
Isoform_62187_3	chr6	-	1168	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53551	-1053	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	4.54606056566195	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATGAAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	134326827	134286966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_134287767_134291473_134291617_134293190_134293294_134326705
Isoform_62188_5	chr6	-	1768	8	NNC	ENSMUSG00000030101.16	novel	452	2	NA	NA	6	1925	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	32.630898090676	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAAAAATGGTTTGGT	2478	False	NA	NA	False	AATAAA	-20	NA	108162537	108119348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_108120149_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
Isoform_62189_3	chr6	-	344	2	NNC	ENSMUSG00000107479.2	novel	479	2	NA	NA	34	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCTGTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	66442649	66431175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_-_66431365_66442494
Isoform_62190_4	chr6	-	526	2	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTTTTATTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	144930097	144907257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_144907643_144929956
Isoform_62191_48	chr6	+	3522	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	44	222	0	-6	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAGGTGTGTGAGA	6	True	NA	16	True	AATAAA	-13	NA	3498425	3603309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
Isoform_62192_3	chr6	+	3772	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	14	2	-8	-2	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTGTCTTTGAATTC	NA	False	NA	NA	False	TATAAA	-20	NA	3498395	3603529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
Isoform_62193_5	chr6	+	3858	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	94	9	-16	-9	multi-exon	TRUE	canonical	3	22	junction_3	9.97574914150592	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCAAGCCATGTGTGG	5	True	NA	21	True	AATAAA	-32	NA	4600932	4643346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
Isoform_62194_3	chr6	+	2780	11	NIC	ENSMUSG00000032827.16	novel	3046	15	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	5.31883445878888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAGAAATACAACAAA	-11	True	NA	NA	False	NA	NA	NA	4903311	5113778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_4903449_4905225_4906845_5045935_5046069_5057457_5057579_5062117_5062193_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600
Isoform_62196_17	chr6	+	990	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	13	3320	10	-3320	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATGTTGGGTGACC	-5	True	NA	8	True	AATAAA	-16	NA	6956016	7039659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_6956201_7038853
Isoform_62197_22	chr6	+	773	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	5	3545	2	-3545	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTTTGCTATTAGACAT	-13	True	NA	NA	False	AATAAA	-33	NA	6956008	7039434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_6956201_7038853
Isoform_62199_19	chr6	+	3700	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	0	10	0	-4	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGATAAACTTTGAAACT	-18	True	NA	NA	False	AATAAA	-14	NA	8209221	8236264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_622_16	chr10	-	2530	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	10	-768	0	768	multi-exon	FALSE	canonical	3	145	junction_2	8	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTCCAATGTCTGTT	5716	False	NA	NA	False	AATAGA	-16	NA	4382334	4375325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_4377692_4379076_4379172_4382265
Isoform_62201_33	chr6	+	3026	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	13	671	13	-665	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGATGTTTGAGTGA	-5	True	NA	14	True	AATAAA	-17	NA	8209234	8235603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_62202_4	chr6	+	3973	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	86	-349	86	349	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTGTTCCATTTT	-13	True	NA	NA	False	NA	NA	NA	8209307	8236623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_62205_3	chr6	+	4060	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	0	-350	0	350	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTCCATTTTG	-18	True	NA	NA	False	NA	NA	NA	8209221	8236624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_62207_3	chr6	+	3113	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	-74	671	-74	-665	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGATGTTTGAGTGA	NA	False	NA	14	True	AATAAA	-17	NA	8209147	8235603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
Isoform_62209_12	chr6	+	2070	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	-41	-4	7	0	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCTTTCATTGCATTA	-31	True	NA	NA	False	AATAAA	-26	NA	8259388	8428764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
Isoform_6221_4449	chr11	-	530	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	28	2	28	-2	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	4449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGCTGCTTGTCATTT	5991	False	NA	-16	True	AATATA	-17	NA	78074382	78071762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
Isoform_62211_26	chr6	+	490	3	FSM	ENSMUSG00000029629.18	ENSMUST00000155037.4	478	3	51	-63	-24	63	multi-exon	FALSE	canonical	3	67	junction_1	44	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGAGAAAGAAAA	-5	True	NA	NA	False	NA	NA	NA	11907858	11933472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_11908017_11926725_11926837_11933251
Isoform_62214_7	chr6	+	713	3	ISM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	31	74540	-3	63	5prime_fragment	FALSE	canonical	3	71	junction_1	42	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGAGAAAGAAAA	5	True	NA	NA	False	NA	NA	NA	11925910	11933472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_11926292_11926725_11926837_11933251
Isoform_62215_3	chr6	+	6063	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-68	7	12	-7	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTATTTGGGTCATCCT	-43	True	NA	11	True	AATAAA	-45	NA	13069769	13089261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
Isoform_62216_20	chr6	+	1854	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-54	4202	26	3415	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGATAAAGGTCAAATGAA	-29	True	NA	NA	False	AATAAA	-21	NA	13069783	13085066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
Isoform_62219_29	chr6	+	3401	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	26	4	-16	-4	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACTGTGCTTTAAGA	-15	True	NA	4	True	ATTAAA	-12	NA	15720685	15802160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_62224_4	chr6	+	3451	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	-24	4	-24	-4	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACTGTGCTTTAAGA	136	False	NA	4	True	ATTAAA	-12	NA	15720635	15802160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_62225_22	chr6	+	3235	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	-4	-1360	-4	-1	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTAAGATCTTTTT	85	False	NA	11	True	ATTAAA	-19	NA	15721081	15802167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
Isoform_62229_13	chr6	+	2419	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	22	-1	3	1	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTCTTTCTATGTCC	-12	True	NA	NA	False	AATAAA	-16	NA	17065169	17105823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
Isoform_62233_259	chr6	+	2235	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	53	249	1	-249	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTATAGATTTTTAAAAA	-3	True	NA	-19	True	AATAAA	-18	NA	17637034	17666722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_62234_124	chr6	+	2335	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	55	147	3	-147	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCTAATTTCCTCTT	-1	True	NA	14	True	AATATA	-14	NA	17637036	17666824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_62236_52	chr6	+	2475	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	55	7	3	-7	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATTTGGTAAGTTGT	-1	True	NA	NA	False	AGTAAA	-12	NA	17637036	17666964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_62239_36	chr6	+	2283	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	5	249	5	-249	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTATAGATTTTTAAAAA	1222	False	NA	-19	True	AATAAA	-18	NA	17636986	17666722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_62240_15	chr6	+	2362	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	27	148	-25	-148	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCTAATTTCCTCT	-1	True	NA	13	True	AATATA	-13	NA	17637008	17666823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
Isoform_62251_11	chr6	+	2168	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	2	-55	2	1	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	17	False	NA	NA	False	AATAAA	-24	NA	17694032	17943020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_62253_11	chr6	+	2118	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-17	-55	-17	1	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTGTCGTCTTCTA	-2	True	NA	NA	False	AATAAA	-24	NA	17694013	17943020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_62254_4	chr6	+	2265	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-165	-54	-80	0	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	253	False	NA	NA	False	AATAAA	-23	NA	17693865	17943019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_62256_5	chr6	+	2160	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-56	-58	-18	-1	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCGTCTTCTATCT	-3	True	NA	NA	False	AATAAA	-27	NA	17693974	17943023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
Isoform_62258_269	chr6	+	756	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	50	1	-12	-1	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTCTTTTCTTTCC	-21	True	NA	16	True	AATAAA	-16	NA	18848627	18854051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
Isoform_62259_23	chr6	+	796	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	11	0	11	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-4	True	NA	17	True	AATAAA	-17	NA	18848588	18854052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
Isoform_62263_7	chr6	+	2685	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	-22	1137	-22	-2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	NA	False	NA	20	True	AATATA	-19	NA	21949547	21974900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
Isoform_6227_24	chr11	-	5923	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	287	278	287	4	multi-exon	TRUE	canonical	3	251	junction_18	43.9224555183955	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136526	78097849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_62271_695	chr6	+	1126	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-10	0	-10	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-41	True	NA	17	True	AATAAA	-17	NA	28423548	28426601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
Isoform_62277_1333	chr6	+	3455	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	16	11	5	-11	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	1333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	9	True	NA	19	True	AATAAA	-20	NA	28480362	28888820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
Isoform_6228_4	chr11	-	6199	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	11	278	11	4	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136802	78097849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_62287_30	chr6	+	916	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	64	2	64	-2	multi-exon	FALSE	canonical	3	124	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTGTCCTGTTGACA	-19	True	NA	12	True	AATAAA	-19	NA	29272688	29275443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29272810_29274648
Isoform_62289_360	chr6	+	3174	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	48	7	35	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	1	True	NA	111	True	AATAAA	-15	NA	29348152	29376667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_62290_165	chr6	+	3209	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	13	7	0	-4	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	111	True	AATAAA	-15	NA	29348117	29376667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_62291_284	chr6	+	3174	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	35	-539	35	-4	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	1	True	NA	111	True	AATAAA	-15	NA	29348152	29376667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
Isoform_62297_4	chr6	+	2843	13	NIC	ENSMUSG00000029769.18	novel	3356	15	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.64049658629248	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGTGTGACTTTTTCT	19	True	NA	NA	False	ATTAAA	-20	NA	29402915	29426952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_29403025_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29426623
Isoform_62298_746	chr6	+	634	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	67	2	67	-2	multi-exon	FALSE	canonical	3	1924	junction_1	0	746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTACTGGTATGGATA	-8	True	NA	35	True	ATTAAA	-17	NA	29467783	29470509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29467974_29470065
Isoform_62301_18	chr6	+	2135	9	FSM	ENSMUSG00000029771.13	ENSMUST00000004392.12	2189	9	48	6	-35	-6	multi-exon	FALSE	canonical	3	5	junction_7	3.25720355519885	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGTCTGCCCATTT	1	True	NA	NA	False	AATAAA	-6	NA	29526671	29537312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29526774_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
Isoform_62302_23	chr6	+	2025	8	FSM	ENSMUSG00000001763.15	ENSMUST00000046750.14	1994	8	-33	2	-33	0	multi-exon	FALSE	canonical	3	27	junction_2	5.15474815790535	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	-1	True	NA	7	True	AATAAA	-16	NA	29694187	29718556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29694544_29709939_29709998_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
Isoform_62304_13	chr6	+	2022	8	FSM	ENSMUSG00000001763.15	ENSMUST00000115250.4	1977	8	-45	0	-33	0	multi-exon	FALSE	canonical	3	18	junction_2	7.38172039015075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	-1	True	NA	7	True	AATAAA	-16	NA	29694187	29718556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29694544_29709939_29709998_29710588_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
Isoform_62305_64	chr6	+	3828	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-55	6	-55	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	-10	True	NA	NA	False	NA	NA	NA	29735637	29761358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_62306_41	chr6	+	3856	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-85	8	-85	-8	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCATGCGTGTTTCTT	98	False	NA	NA	False	NA	NA	NA	29735607	29761356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_62307_13	chr6	+	4018	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-245	6	-54	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	29735447	29761358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_62308_17	chr6	+	3945	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-172	6	19	-6	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGCGTGTTTCTTTT	11	True	NA	NA	False	NA	NA	NA	29735520	29761358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
Isoform_62309_53	chr6	+	5152	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	7	-4	-5	-1	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTGTCCTGAGAATAC	-22	True	NA	7	True	AATAAA	-15	NA	29768485	29912307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
Isoform_6231_4	chr11	-	1082	5	ISM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	-226	25424	-226	-25142	5prime_fragment	FALSE	canonical	3	256	junction_1	20.6079474960511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGATGAAGAGGAATATG	NA	False	NA	NA	False	NA	NA	NA	78137039	78122995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
Isoform_62312_4	chr6	+	5368	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	0	2	0	-2	multi-exon	FALSE	canonical	3	5	junction_19	5.0386009963084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGGTCTTTAGTTCTTT	-5	True	NA	NA	False	AATAAA	-22	NA	29917011	29959678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
Isoform_62315_22	chr6	+	1912	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	175.389309030574	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATATGTATGGTTTGGG	12	True	NA	1	True	AATAAA	-17	NA	30048026	30144853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_62316_8	chr6	+	3324	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	13	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTCTTTTCTGTATGT	-1	True	NA	75	True	TATAAA	-18	NA	30048013	30153185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_6232_85	chr11	-	2417	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	0	80	0	-2	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATGTCTGTCTTCAG	4413	False	NA	-4	True	AATACA	-18	NA	78374624	78364118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
Isoform_62322_32	chr6	+	1878	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	-3	4	-1	1	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	12	True	NA	3	True	AATAAA	-19	NA	30048026	30144855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_62324_13	chr6	+	3272	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	26	-3	-1	3	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATGTTCTTTTCTGTA	12	True	NA	72	True	TATAAA	-15	NA	30048026	30153182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_62326_23	chr6	+	3233	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	8	54	8	-54	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAAGTTTCCAATTCT	-6	True	NA	15	True	ATTAAA	-27	NA	30048008	30153125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_62327_8	chr6	+	3322	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	-23	-4	-9	4	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATGTTCTTTTCTGTAT	NA	False	NA	73	True	TATAAA	-16	NA	30047977	30153183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_62329_7	chr6	+	2282	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	167.068411636272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	-2	True	NA	NA	False	NA	NA	NA	30048068	30140903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
Isoform_62331_18	chr6	+	1909	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATATGTATGGTTTGGG	12	True	NA	1	True	AATAAA	-17	NA	30048026	30144853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_62332_7	chr6	+	3322	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	180.170347634306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATGTTCTTTTCTGTAT	-4	True	NA	73	True	TATAAA	-16	NA	30048010	30153183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_62335_17	chr6	+	1918	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	127.487870108467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-31	True	NA	3	True	AATAAA	-19	NA	30047983	30144855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
Isoform_62337_25	chr6	+	3214	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	30	340	-11	-62	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTTTGAGAAAAGTTT	2	True	NA	7	True	ATTAAA	-19	NA	30048016	30153117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
Isoform_62339_3	chr6	+	2202	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-60	3759	-32	579	multi-exon	TRUE	canonical	3	95	junction_2	43.3720624650147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTCTGAACTTCCCTTG	NA	False	NA	20	True	ATTAAA	-27	NA	30401834	30451419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_6234_255	chr11	-	1306	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	41	0	41	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1672	False	NA	-29	True	AATAAA	-21	NA	78402957	78397880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
Isoform_62340_14	chr6	+	2143	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	0	3758	0	580	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTGAACTTCCCTTGT	-21	True	NA	21	True	ATTAAA	-28	NA	30401894	30451420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_62343_15	chr6	+	2082	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	4	1865	4	582	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAACTTCCCTTGTGC	-45	True	NA	23	True	ATTAAA	-30	NA	30401870	30451422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
Isoform_62346_3	chr6	+	1032	7	ISM	ENSMUSG00000071553.11	ENSMUST00000096066.5	1388	11	5415	3	355	-3	3prime_fragment	FALSE	canonical	2	2	junction_5	2.98142396999972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGCTTCTGGTCATTT	2004	False	NA	NA	False	ATTAAA	-19	NA	30546995	30564472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
Isoform_62347_14	chr6	+	2658	13	FSM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	0	7	0	-4	multi-exon	FALSE	canonical	1	1	junction_1	120.876888701779	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	0	True	NA	9	True	AATAAA	-15	NA	30738051	30748457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_62348_585	chr6	+	2554	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	3	4	0	-4	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	0	True	NA	9	True	AATAAA	-15	NA	30738051	30748457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_6235_12	chr11	-	1327	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	18	2	18	-2	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATCTTTGGTCTTA	1649	False	NA	-31	True	AATAAA	-19	NA	78402980	78397882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
Isoform_62350_38	chr6	+	2609	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	-52	4	-52	-4	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATTCCGGCTTCCC	NA	False	NA	9	True	AATAAA	-15	NA	30737996	30748457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
Isoform_62356_7	chr6	+	2440	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	51	1	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTATATTTTTCTTTA	NA	False	NA	18	True	AATAAA	-26	NA	31349880	31484904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_62359_285	chr6	+	2440	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	113	8842	3	1	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTATATTTTTCTTTA	NA	False	NA	18	True	AATAAA	-26	NA	31375782	31484904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
Isoform_6236_4	chr11	-	1538	5	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	30	0	intron_retention	FALSE	canonical	3	479	junction_4	36.9425229241318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1661	False	NA	-29	True	AATAAA	-21	NA	78402968	78397880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78398632_78399144_78399522_78400550_78400641_78401173_78401248_78402722
Isoform_62362_17	chr6	+	4769	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	51	4	0	-4	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATCGTATGTTGTTTT	NA	False	NA	16	True	ATTAAA	-18	NA	33226070	33950910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
Isoform_62366_6	chr6	+	1284	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	60	14	60	-14	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATCCAACACGTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	34331113	34345384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
Isoform_62367_5	chr6	+	1333	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	36	2	5	1	multi-exon	TRUE	canonical	3	14	junction_8	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATTTTCAACTGTCAGA	3042	False	NA	2	True	AATAAA	-16	NA	34361188	34373883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
Isoform_6237_5	chr11	-	2555	4	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	37	-5	intron_retention	FALSE	canonical	3	479	junction_3	42.5519290592879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTTATCTTTGGTC	1668	False	NA	-34	True	AATAAA	-16	NA	78402961	78397885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78398632_78399144_78400641_78401173_78401248_78402722
Isoform_62376_5	chr6	+	3995	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	40	6	-8	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTCTGTCTCGTGCAT	1297	False	NA	26	True	AATAAA	-44	NA	34686416	34752402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
Isoform_6238_5	chr11	-	3581	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	84	55	84	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427013	78413730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
Isoform_62380_9	chr6	+	1501	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-45	-1	-45	1	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	12	True	TATAAA	-17	NA	34897849	34916278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
Isoform_62381_14	chr6	+	2405	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	3	1	3	-1	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTTATTCCTTCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	35154553	35182587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
Isoform_62383_32	chr6	+	6218	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	189	5	3	1	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACAAATGTGTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	35154553	35224526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
Isoform_62384_22	chr6	+	2475	4	NNC	ENSMUSG00000073155.13	novel	690	4	NA	NA	19	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	477.609556948863	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTCTGCCACACTA	NA	False	NA	12	True	NA	NA	NA	35229607	35240428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_35229718_35237344_35237399_35238093_35239029_35239052
Isoform_62385_477	chr6	+	618	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	46	1857	-16	2	multi-exon	FALSE	canonical	3	978	junction_2	33.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	15	True	ATTAAA	-19	NA	35229634	35238574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_35229718_35237344_35237399_35238093
Isoform_62386_37	chr6	+	973	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	57	1491	-5	-17	multi-exon	FALSE	canonical	3	978	junction_2	33.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGAAGTGTGGTGCAAA	NA	False	NA	NA	False	ATTAAA	-37	NA	35229645	35238940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_35229718_35237344_35237399_35238093
Isoform_62391_185	chr6	+	3931	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	1	8	1	-8	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847746	37943223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_62393_3	chr6	+	4037	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	-105	8	-105	-8	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847640	37943223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_62394_31	chr6	+	3998	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	36	8	36	-8	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847781	37943223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_62395_22	chr6	+	4033	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	1	8	1	-8	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTGGTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	37847746	37943223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
Isoform_62396_3	chr6	+	536	3	FSM	ENSMUSG00000029829.5	ENSMUST00000031851.5	631	3	93	2	93	-2	multi-exon	FALSE	canonical	2	4	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCTGGCTCTTTTATT	NA	False	NA	NA	False	TTTAAA	-16	NA	38086282	38092742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38086491_38091542_38091612_38092483
Isoform_62397_14	chr6	+	4167	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	23	5	23	-5	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTGTGTTCATGTTT	3508	False	NA	NA	False	ATTAAA	-18	NA	38358426	38404577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
Isoform_62398_135	chr6	+	440	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	38	1	38	0	multi-exon	FALSE	canonical	3	741	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGGTTTTTGTGTGC	9967	False	NA	8	True	ATTAAA	-16	NA	38511795	38516383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38511946_38516093
Isoform_624_216	chr10	-	1761	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	180	-1	180	1	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGTGCAGGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	5755420	5749158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
Isoform_62401_9	chr6	+	1177	2	NIC	ENSMUSG00000029823.17	novel	382	5	NA	NA	-8	6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGTAACT	NA	False	NA	39	True	NA	NA	NA	38528391	38546506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_38528844_38545781
Isoform_62403_10	chr6	+	1770	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	22	5594	22	-1164	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGTTTTCCACATTT	NA	False	NA	6	True	NA	NA	NA	38528421	38580811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_62404_4	chr6	+	3337	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	6	4043	6	387	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCCCTTGCTGTGAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	38528405	38582362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
Isoform_62406_5	chr6	+	1761	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	1	2491	1	-1164	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGTTTTCCACATTT	NA	False	NA	6	True	NA	NA	NA	38528400	38580811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_62407_3	chr6	+	3148	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-8	1113	-8	214	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTATTTCATATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	38528391	38582189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_62408_3	chr6	+	4204	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	2	47	2	-47	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	38528401	38583255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
Isoform_62409_6	chr6	+	1053	3	ISM	ENSMUSG00000079598.5	ENSMUST00000114874.5	1431	5	13675	8	12863	-8	3prime_fragment	FALSE	canonical	2	3	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGAGTCTGCTGGCAT	NA	False	NA	NA	False	AATAAA	-12	NA	38653676	38657792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_38653899_38654443_38654545_38657062
Isoform_6241_3	chr11	-	2520	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	21	1179	21	-1179	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTGAAAGACCTTTC	NA	False	NA	NA	False	AATACA	-19	NA	78427076	78414854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
Isoform_62410_57	chr6	+	2523	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	0	1019	0	-2	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTCTTCTTCTTA	NA	False	NA	16	True	AATACA	-16	NA	39550806	39564684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
Isoform_62413_300	chr6	+	417	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	29	3925	15	-14	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
Isoform_62414_285	chr6	+	421	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	20	14	15	-14	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
Isoform_62416_6	chr6	+	512	4	NIC	ENSMUSG00000002416.14	novel	491	4	NA	NA	15	-14	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	1061.02413837868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAGGAACTGAGTTAT	NA	False	NA	16	True	ATTAAA	-25	NA	39569536	39576391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_39569738_39573384_39573530_39575199_39575300_39576325
Isoform_62419_6	chr6	+	837	4	ISM	ENSMUSG00000029916.12	ENSMUST00000201342.4	785	8	10	15884	8	4	5prime_fragment	FALSE	canonical	3	547	junction_1	54.1130503873347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTACAGT	NA	False	NA	NA	False	AAAAAG	-13	NA	40302428	40329940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286
Isoform_62421_33	chr6	+	2282	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302428	40373690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62423_387	chr6	+	2202	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	6	8	-6	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302428	40373690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62424_23	chr6	+	2274	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	251	6	-62	-6	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302356	40373690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62425_21	chr6	+	2282	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	325	-76	10	76	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTTTTTTCTCCCTT	NA	False	NA	84	True	NA	NA	NA	40302430	40373772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62426_6	chr6	+	2373	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	-165	8	165	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCAATTTTATACATAT	NA	False	NA	NA	False	NA	NA	NA	40302428	40373861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62427_9	chr6	+	2567	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	-42	6	-42	-6	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATCCAGTGTAATCTA	NA	False	NA	2	True	NA	NA	NA	40302063	40373690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
Isoform_62435_252	chr6	+	623	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	68	3707	5	1	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	40448353	40457927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_62436_94	chr6	+	954	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-20	-1	2	1	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	40448388	40457927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_62439_65	chr6	+	1199	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-13	2	2	1	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	40448388	40457927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
Isoform_62440_20	chr6	+	3747	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	9	6	9	-4	multi-exon	TRUE	canonical	2	8	junction_2	4.47522978861417	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAGGTGTGTCCATG	337	False	NA	7	True	ATTAAA	-19	NA	41582424	41597437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
Isoform_62441_21	chr6	+	927	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	2	1	2	-1	multi-exon	FALSE	canonical	3	11	junction_5	4.42165358301205	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAAAGCATTTCTGGGT	NA	False	NA	1	True	AATAAA	-12	NA	42222870	42227374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
Isoform_62443_5	chr6	+	3582	12	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	42.7493173305891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42241983	42259441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_62444_5	chr6	+	3566	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-112	-2015	23	-1	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42241941	42259441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_62445_5	chr6	+	3503	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-48	-2016	16	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42242005	42259442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
Isoform_62446_77	chr6	+	3479	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	47	3	-24	-3	multi-exon	FALSE	canonical	3	71	junction_8	18.1	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241965	42259439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
Isoform_62447_7	chr6	+	2233	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	205	167	0	3	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	6	True	TATAAA	-16	NA	42326966	42335329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
Isoform_62448_3	chr6	+	2150	9	FSM	ENSMUSG00000029860.17	ENSMUST00000070635.13	2301	9	153	-2	-11	2	multi-exon	FALSE	canonical	2	6	junction_3	9.78439446261239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTAGTACTTGATTTT	NA	False	NA	5	True	TATAAA	-15	NA	42326955	42335328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
Isoform_6245_18	chr11	-	3569	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	144	55	83	-55	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427014	78413730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
Isoform_62451_119	chr6	+	3042	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	17	17	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTTGTTTTAAGTT	NA	False	NA	25	True	AATAAA	-30	NA	47430854	47503009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62452_40	chr6	+	3104	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-47	15	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGGTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-28	NA	47430790	47503007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62453_31	chr6	+	3103	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	17	-3	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATATTCCCATTGT	NA	False	NA	16	True	AATAAA	-17	NA	47430854	47503070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62454_15	chr6	+	3173	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-47	3	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47430790	47503076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62458_29	chr6	+	3104	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	56	1	-12	-1	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATATTCCCATTGTCT	NA	False	NA	18	True	AATAAA	-19	NA	47431309	47503072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62459_59	chr6	+	3101	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-5	65	-5	16	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47431248	47503008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_6246_5	chr11	-	3620	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	93	55	32	-55	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427065	78413730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
Isoform_62460_144	chr6	+	3042	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	54	65	-14	16	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47431307	47503008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62461_19	chr6	+	3196	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-32	-3	-32	3	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47431221	47503076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
Isoform_62465_5	chr6	+	2276	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	4	626	4	-626	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAACTAGAGACATGCT	NA	False	NA	3	True	CATAAA	-16	NA	47812601	47843996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
Isoform_62466_16	chr6	+	3704	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	353	1516	-99	-1516	multi-exon	TRUE	canonical	3	24	junction_5	6.34388666033558	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854490	47883903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_62467_58	chr6	+	3633	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	424	1516	-28	-1516	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854561	47883903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
Isoform_62469_185	chr6	+	2665	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	125	11	125	-11	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATGTTCACAG	NA	False	NA	13	True	AATAAA	-20	NA	47897534	47909562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
Isoform_62470_26	chr6	+	2655	5	NNC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	132	-11	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	63.3141966702571	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATGTTCACAG	NA	False	NA	13	True	AATAAA	-20	NA	47897541	47909562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907647
Isoform_62471_55	chr6	+	2715	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	38	8	-17	-5	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAAGTCCCTGTCTTG	9751	False	NA	10	True	AATAAA	-15	NA	47930361	47942226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
Isoform_62472_4	chr6	+	2819	5	FSM	ENSMUSG00000045466.19	ENSMUST00000140719.2	2823	5	-8	12	-6	-12	multi-exon	FALSE	canonical	2	2	junction_3	12.1937483982572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGACGTGTAAAGTCCC	9762	False	NA	3	True	AATAAA	-8	NA	47930372	47942219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_47930517_47932750_47933105_47934409_47934659_47939458_47939567_47940255
Isoform_62473_10	chr6	+	3977	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	73	2645	1	1	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGGCCATTGGCTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	48372592	48393834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_62474_5	chr6	+	4070	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	-18	2643	-18	-2	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCCATTGGCTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	48372501	48393836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_62475_6	chr6	+	3995	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	-238	566	-2	1	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGGCCATTGGCTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	48372561	48393834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_62477_5	chr6	+	3854	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	16.9036793332103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372576	48393835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
Isoform_62478_31	chr6	+	1718	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	66	5	16	-5	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGTCTGGCCTCTGCT	6270	False	NA	22	True	AATAAA	-30	NA	48514614	48518730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
Isoform_62479_4	chr6	+	2890	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	21	2	6	-1	multi-exon	FALSE	canonical	3	10	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGTCTTGGTCATGGT	8300	False	NA	12	True	NA	NA	NA	48531750	48547654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48531917_48533888_48534029_48545070
Isoform_62480_4	chr6	+	2768	2	FSM	ENSMUSG00000073096.12	ENSMUST00000153222.2	374	2	0	-2394	0	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGTCTTGGTCATGGT	8282	False	NA	12	True	NA	NA	NA	48531732	48547654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48531917_48545070
Isoform_62481_3	chr6	+	3096	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	41	1	-8	0	multi-exon	FALSE	canonical	3	41	junction_2	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570865	48576015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48570987_48571724_48571911_48573226
Isoform_62482_95	chr6	+	2508	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-44	1679	-44	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	8	True	AATGAA	-16	NA	48578952	48598482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48579055_48590111_48590194_48596158
Isoform_62483_3	chr6	+	1737	4	FSM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	321	1459	-138	-1459	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTTTTAGTCCATCCAA	1996	False	NA	NA	False	AATAAA	-16	NA	48604018	48609160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48604048_48606061_48606939_48607105_48607250_48608473
Isoform_62484_13	chr6	+	1384	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	4	-4	4	4	multi-exon	FALSE	canonical	3	46	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTGACTTCTTGTCCC	1293	False	NA	21	True	NA	NA	NA	48653066	48655637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48653189_48654375
Isoform_62486_73	chr6	+	2268	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	35	1398	-15	-1398	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGATTATTATATT	NA	False	NA	NA	False	ATTAAA	-15	NA	49013583	49033718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
Isoform_62489_4	chr6	+	2415	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-111	1397	-42	-1397	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGATTATTATATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	49013437	49033719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
Isoform_6249_439	chr11	-	1334	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	41	0	41	0	multi-exon	TRUE	canonical	3	1037	junction_2	9	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	-7	True	AATAAA	-23	NA	78441562	78432642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78433623_78434311_78434457_78441353
Isoform_62490_422	chr6	+	714	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	59	2046	6	27	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	354	False	NA	6	True	AATAAA	-15	NA	49050787	49061639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
Isoform_62491_34	chr6	+	749	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	24	2046	24	27	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	319	False	NA	6	True	AATAAA	-15	NA	49050752	49061639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
Isoform_62494_26	chr6	+	535	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	6	2046	6	27	multi-exon	FALSE	canonical	3	89	junction_1	380.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	354	False	NA	6	True	AATAAA	-15	NA	49050787	49061639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49051038_49059778_49059861_49061436
Isoform_62496_11	chr6	+	1420	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	45	1265	-39	1	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACATAGGGTCAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	49344717	49366208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
Isoform_62497_5	chr6	+	1407	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACATAGGGTCAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	49344727	49366208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
Isoform_62499_8	chr6	+	3277	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	-37	-3	-37	3	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTCATATTCTTTGCA	136	False	NA	NA	False	AATAAA	-25	NA	49372500	49446438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_62500_10	chr6	+	2739	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	53.746739604748	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	136	False	NA	NA	False	AATAAA	-21	NA	49372500	49446434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_62501_5	chr6	+	2461	20	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.5748107857386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	138	False	NA	NA	False	AATAAA	-21	NA	49372502	49446434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_62504_16	chr6	+	1927	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	14	-47	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAGTCAGCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	50087242	50175357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62510_114	chr6	+	1941	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	10	210	10	-47	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAGTCAGCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	50087238	50175357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62511_15	chr6	+	2733	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-5	-567	3	215	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCAGTTTTGTTTTTT	NA	False	NA	12	True	TATAAA	-13	NA	50087223	50176134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62513_39	chr6	+	2173	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	10	-22	10	11	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTAGTACCCTTGCT	NA	False	NA	30	True	CATAAA	-27	NA	50087238	50175589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62517_4	chr6	+	2064	14	NNC	ENSMUSG00000038388.15	novel	2222	14	NA	NA	1	-47	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	409.010698490015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAGTCAGCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	50087229	50175357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_50087445_50102289_50102404_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62520_4	chr6	+	2196	13	NIC	ENSMUSG00000038388.15	novel	1281	10	NA	NA	-195	48	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	312.40984255017	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAACAAGTCAGCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	50087644	50175355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_50088108_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
Isoform_62522_5	chr6	+	1165	3	FSM	ENSMUSG00000029832.17	ENSMUST00000160133.2	1125	3	-42	2	37	-2	multi-exon	FALSE	canonical	3	21	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCATTGTTAACTTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	51409686	51433854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51410394_51427946_51428124_51433573
Isoform_62523_15	chr6	+	2499	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	50	-5	-29	5	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTATTCCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	51409699	51435753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
Isoform_62524_19	chr6	+	382	2	FSM	ENSMUSG00000029836.16	ENSMUST00000153699.2	308	2	-266	192	51	-192	multi-exon	FALSE	canonical	3	2485	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGTGAAAACCTAG	NA	False	NA	NA	False	AATAAA	-10	NA	51447390	51448848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51447720_51448795
Isoform_62527_7	chr6	+	358	4	ISM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	131	5184	-2	-80	5prime_fragment	FALSE	canonical	3	2375	junction_3	51.1620519091597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGATGGTACAAAA	NA	False	NA	NA	False	AAAAAG	-7	NA	51447640	51455500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417
Isoform_62528_11	chr6	+	2445	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	17	18	17	-9	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAGCAAAACAAAACT	NA	False	NA	NA	False	ATTAAA	-6	NA	51500897	51567641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_62529_31	chr6	+	2406	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	56	18	-25	-9	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAGCAAAACAAAACT	NA	False	NA	NA	False	ATTAAA	-6	NA	51500936	51567641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_6253_3	chr11	-	3145	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-95	2	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	27.2178235234813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTTGTCGTTGTTG	NA	False	NA	-15	True	ACTAAA	-15	NA	78588294	78458237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
Isoform_62534_12	chr6	+	2457	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	-2	9	-2	-9	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAGCAAAACAAAACT	NA	False	NA	NA	False	ATTAAA	-6	NA	51521500	51567641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
Isoform_62537_9	chr6	+	759	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-24	-327	-15	-13	multi-exon	FALSE	canonical	3	43	junction_2	88.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	808	False	NA	NA	False	NA	NA	NA	52079958	52089495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_52080017_52083750_52083877_52088920
Isoform_62540_5	chr6	+	1855	3	FSM	ENSMUSG00000085412.8	ENSMUST00000189071.7	511	3	-54	-1290	-9	1290	multi-exon	FALSE	canonical	3	13	junction_2	103.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGTACATTTCAG	769	False	NA	NA	False	AATACA	-6	NA	52079919	52091954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_52080017_52083750_52083877_52090322
Isoform_62542_5	chr6	+	392	2	FSM	ENSMUSG00000087658.3	ENSMUST00000159006.2	253	2	-88	-51	4	-48	multi-exon	FALSE	canonical	3	38	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGACCTAGAAACTAGC	NA	False	NA	11	True	AATAAA	-20	NA	52135415	52139051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_52135667_52138910
Isoform_62551_158	chr6	+	2956	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	34	295	0	-295	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTTCTGTGAAATAAT	NA	False	NA	11	True	AATAAA	-13	NA	52690747	52743470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
Isoform_62552_69	chr6	+	3249	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	34	2	0	-2	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCTTTGTAAATGATT	NA	False	NA	NA	False	AATAAA	-25	NA	52690747	52743763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
Isoform_62553_4	chr6	+	1801	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	388	229	-78	101	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTAGACTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	54016945	54277477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
Isoform_62555_46	chr6	+	1854	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	79	4806	79	0	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	54572174	54618018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
Isoform_62558_3	chr6	+	6638	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	79	22	79	-22	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTTCTTCAAAGGG	NA	False	NA	10	True	AATAAA	-20	NA	54572174	54622802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
Isoform_62559_3	chr6	+	5729	8	ISM	ENSMUSG00000005225.16	ENSMUST00000101385.3	1838	14	18997	-4778	18997	-28	3prime_fragment	FALSE	canonical	3	234	junction_1	23.3509166013339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTAAACGTTCTTC	2410	False	NA	4	True	AATAAA	-14	NA	54599128	54622796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
Isoform_62560_7	chr6	+	5196	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	107	0	-23	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTTGTCGTCTTTACTC	NA	False	NA	7	True	ATTAAA	-19	NA	54658715	54680836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_54658917_54665990_54666114_54675964
Isoform_62561_12	chr6	+	605	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	107	4591	-23	-1881	multi-exon	TRUE	canonical	3	54	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATCTGTGACGAGGTTT	NA	False	NA	NA	False	AATGAA	-27	NA	54658715	54676245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_54658917_54665990_54666114_54675964
Isoform_62565_3441	chr6	+	2382	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	3441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCCATTT	NA	False	NA	37	True	ATTAAA	-31	NA	55014991	55056487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
Isoform_62566_1025	chr6	+	2418	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	1025	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014946	55056478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
Isoform_6257_10	chr11	-	3631	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-54	867	-54	-621	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAATAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	78588253	78458860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
Isoform_62587_6	chr6	+	3439	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	0	3231	0	-3231	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAGAACAGTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	56691911	56735666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
Isoform_62591_424	chr6	+	2963	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	46	0	46	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809089	56856343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
Isoform_626_34	chr10	-	2280	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	-339	-1	-339	1	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGTGCAGGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	5755939	5749158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
Isoform_62602_16	chr6	+	3065	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	404	-960	-47	3	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	11	True	AATAAA	-21	NA	57680024	57716427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
Isoform_62604_4	chr6	+	2112	16	NIC	ENSMUSG00000029802.14	novel	600	5	NA	NA	-15	-60	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.6165106353087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58572944	58669436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_58573003_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_62605_3	chr6	+	2221	17	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-26	-62	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	52.4486355875918	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58572933	58669434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_58573003_58573993_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_62606_19	chr6	+	2535	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-43	3225	-43	-60	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58573612	58669436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_62609_60	chr6	+	2147	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-31	62	-13	-62	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGTTCTTTTCTTC	NA	False	NA	14	True	ATTAAA	-21	NA	58617517	58669434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
Isoform_62610_38	chr6	+	2936	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	70	1	70	-1	multi-exon	FALSE	canonical	3	130	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGATGACTTTTTCTGA	NA	False	NA	8	True	NA	NA	NA	59185924	59189017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_59186167_59186323
Isoform_62614_5	chr6	+	3055	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	-49	1	-49	-1	multi-exon	FALSE	canonical	3	130	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGATGACTTTTTCTGA	NA	False	NA	8	True	NA	NA	NA	59185805	59189017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_59186167_59186323
Isoform_62615_3	chr6	+	3330	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	70	-393	70	393	multi-exon	FALSE	canonical	3	130	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTCATGTTTATTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	59185924	59189411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_59186167_59186323
Isoform_62623_15	chr6	+	705	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	-39	-66	7	-6	multi-exon	FALSE	canonical	3	133	junction_2	73	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTGTAGCAGAGCAT	1746	False	NA	-1	True	AATAAA	-9	NA	65019611	65021181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65019715_65020189_65020430_65020819
Isoform_62628_5	chr6	+	4951	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1702	False	NA	17	True	AATAAA	-19	NA	65019567	65093034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_62629_10	chr6	+	4463	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGAGATTTGTTAATTA	1733	False	NA	NA	False	AATAAA	-11	NA	65019598	65092577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_6263_3	chr11	-	1538	11	FSM	ENSMUSG00000001123.16	ENSMUST00000108269.10	1586	11	47	1	-46	-1	multi-exon	FALSE	canonical	2	4	junction_6	7.48398289682706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATGTGAGATGGCTGG	NA	False	NA	-3	True	AATAAA	-23	NA	78875703	78853805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78860539_78860633_78862142_78862254_78863813_78864016_78867438_78867528_78875603
Isoform_62630_6	chr6	+	862	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	-130	2	39	-2	multi-exon	FALSE	canonical	3	133	junction_2	64	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTAGCAGAGCATTATG	1824	False	NA	3	True	AATAAA	-13	NA	65019689	65021185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65019946_65020189_65020430_65020819
Isoform_62633_17	chr6	+	743	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	-15	6	-15	-6	multi-exon	FALSE	canonical	3	133	junction_2	64	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTGTAGCAGAGCAT	1939	False	NA	-1	True	AATAAA	-9	NA	65019804	65021181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65019946_65020189_65020430_65020819
Isoform_62636_3	chr6	+	4910	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	244	14	-5	-14	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTCACACCCT	1971	False	NA	14	True	AATAAA	-16	NA	65019836	65093031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_62637_3	chr6	+	4457	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	243	468	-6	-5	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGAGATTTGTTAATTA	1970	False	NA	NA	False	AATAAA	-11	NA	65019835	65092577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
Isoform_62638_3	chr6	+	1940	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	-30	28	4	-28	multi-exon	FALSE	canonical	3	137	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65755975	65809886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65756178_65771283_65771368_65808232
Isoform_6264_7	chr11	-	1461	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	54	5	32	0	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGTGAGATGGCTGGC	NA	False	NA	-2	True	AATAAA	-24	NA	78875718	78853804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
Isoform_62640_40	chr6	+	2175	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	-20	0	-20	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755951	65913360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
Isoform_62644_4	chr6	+	875	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-73	923	5	-923	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTGTTATTGTTCC	NA	False	NA	NA	False	AAGAAA	-19	NA	66512378	66517052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
Isoform_62649_7	chr6	+	1368	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	78	6111	0	89	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGGATGGATTGTGTT	NA	False	NA	29	True	AATATA	-19	NA	66512451	66518093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
Isoform_6265_3	chr11	-	3172	4	ISM	ENSMUSG00000018334.19	ENSMUST00000018478.11	5495	19	125648	0	-349	0	3prime_fragment	FALSE	canonical	3	12	junction_1	12.3917535302941	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	78911585	78904265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507
Isoform_62650_4	chr6	+	1408	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	35	6114	0	86	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGAGTGGATGGATTGT	NA	False	NA	26	True	AATATA	-16	NA	66512408	66518090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
Isoform_62652_5	chr6	+	749	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-16	1143	1	14	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTATATTCTGTTC	NA	False	NA	17	True	ATTAAA	-23	NA	66873407	66994927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
Isoform_62653_4	chr6	+	1036	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	11	3201	11	3	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGTAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66873391	66995133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_62654_5	chr6	+	818	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	30	3400	-4	21	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTCTGTTCTTAATAA	NA	False	NA	24	True	ATTAAA	-30	NA	66873410	66994934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_62655_3	chr6	+	4171	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	22	55	-4	-55	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873402	66998279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
Isoform_62656_3	chr6	+	1025	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114226.8	1155	5	-10	140	1	3	multi-exon	FALSE	canonical	2	34	junction_3	135.972423674803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGTAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66873407	66995133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66920808_66920867_66992708_66992828_66994447
Isoform_62659_12	chr6	+	980	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-12	-220	-12	3	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGTAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66873394	66995133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
Isoform_6266_4	chr11	-	3147	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-135	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGTGGCTCTTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	79037368	78907858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_62663_4	chr6	+	4083	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	31	-3366	-2	-55	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873437	66998279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
Isoform_62669_83	chr6	+	1664	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	384	13426	-2	-1	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	5869	False	NA	36	True	AATATA	-24	NA	67243991	67261294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_6267_5	chr11	-	3080	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-66	5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_15	11.296372191609	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGCTCTTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	79037299	78907856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_62671_233	chr6	+	1398	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	386	13690	0	-1	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5871	False	NA	18	True	NA	NA	NA	67243993	67261030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_62677_366	chr6	+	1355	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-1	263	0	1	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5871	False	NA	20	True	NA	NA	NA	67243993	67261032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_62678_150	chr6	+	1618	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	-1	0	1	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTCACTTCATTTGTG	5872	False	NA	38	True	AATATA	-26	NA	67243994	67261296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_6268_11	chr11	-	3038	18	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-66	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.61328377369018	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGCTCTTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	79037299	78907856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
Isoform_62682_199	chr6	+	1380	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	27	260	0	-1	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5871	False	NA	18	True	NA	NA	NA	67243993	67261030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_62684_54	chr6	+	1652	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	21	-6	-1	1	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTCACTTCATTTGTG	5865	False	NA	38	True	AATATA	-26	NA	67243987	67261296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_6269_28	chr11	-	2633	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	142.650916403006	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	974	False	NA	-28	True	ATTAAA	-8	NA	79145498	79130217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_62690_291	chr6	+	1336	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	1	-1	0	1	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5872	False	NA	20	True	NA	NA	NA	67243994	67261032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_62691_129	chr6	+	1614	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-13	-265	-8	1	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTCACTTCATTTGTG	5858	False	NA	38	True	AATATA	-26	NA	67243980	67261296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
Isoform_62720_30	chr6	+	4498	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	10	5	10	-5	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTTGACTCTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	70821508	70882224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
Isoform_62721_52	chr6	+	1666	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	21	0	-3	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	6	True	AATAAA	-18	NA	71248681	71262303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71248825_71259134_71259302_71260947
Isoform_62723_3	chr6	+	1777	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	-94	4	-94	-3	multi-exon	FALSE	canonical	3	170	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCTTTGTGTCAG	NA	False	NA	2	True	AATAAA	-14	NA	71248566	71262299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71248825_71259134_71259302_71260947
Isoform_62724_63	chr6	+	2873	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	0	1	0	-1	multi-exon	FALSE	canonical	3	49	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTGTGATGTGAT	NA	False	NA	10	True	NA	NA	NA	71270748	71279863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71270843_71277084
Isoform_62725_8	chr6	+	3241	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	16	7	0	-7	multi-exon	FALSE	canonical	3	15	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAAGGTTGTAGGTT	NA	False	NA	-2	True	AATAAA	-9	NA	71470893	71487858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
Isoform_62728_86	chr6	+	2557	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	95	2	0	-2	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTATATTATGCCTT	NA	False	NA	21	True	NA	NA	NA	71520875	71558561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_62731_5	chr6	+	2468	5	NIC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	153.936675292147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTATGCCTTTGGT	NA	False	NA	25	True	NA	NA	NA	71520907	71558565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_62732_3	chr6	+	1105	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	-6	349	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCATTGTAAATGTCA	NA	False	NA	8	True	AATAAA	-17	NA	71521330	71557152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
Isoform_62733_8	chr6	+	3610	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	305	9	-4	-9	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAGTGTAATGT	1580	False	NA	NA	False	AATAAA	-18	NA	71684849	71787685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
Isoform_62734_8	chr6	+	3640	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	278	6	-31	-6	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAGTGTAATGTTGG	1553	False	NA	NA	False	AATAAA	-21	NA	71684822	71787688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
Isoform_6274_105	chr11	-	2456	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	0	20	0	-4	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	975	False	NA	-28	True	ATTAAA	-8	NA	79145497	79130217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_62741_75	chr6	+	2689	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	46	-7	-2	1	multi-exon	FALSE	canonical	3	675	junction_4	225.763692603481	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808360	71852235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_62743_29	chr6	+	2735	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	0	-7	0	1	multi-exon	FALSE	canonical	3	675	junction_4	225.763692603481	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808314	71852235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_62749_68	chr6	+	2656	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	-36	-321	-2	1	multi-exon	FALSE	canonical	3	438	junction_4	278.631248156016	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808360	71852235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_6275_11	chr11	-	2621	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	144.381524757699	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	974	False	NA	-28	True	ATTAAA	-8	NA	79145498	79130217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134237_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_62753_7	chr6	+	2606	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	5	1	combination_of_known_junctions	TRUE	canonical	3	109	junction_5	436.803951799537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808321	71852242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_62755_6	chr6	+	2692	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	2	-2	combination_of_known_junctions	TRUE	canonical	3	160	junction_4	344.10840870106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTGAGTACTCTATC	NA	False	NA	3	True	AATAAA	-10	NA	71808318	71852232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_62756_10	chr6	+	2649	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_4	344.10840870106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTACTCTATCCCT	NA	False	NA	6	True	AATAAA	-13	NA	71808364	71852235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
Isoform_62757_18	chr6	+	3320	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-5	27324	3	1	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71886039	71932135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
Isoform_62765_43	chr6	+	6105	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-5	3116	3	-3116	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGACTTAAGTTTTTAA	NA	False	NA	19	True	AATAAA	-29	NA	71886039	71956343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
Isoform_62767_14	chr6	+	2255	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	-11	14	-11	-14	multi-exon	FALSE	canonical	3	38	junction_5	8.15304987242334	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATTTCCTGACTTTGA	NA	False	NA	6	True	NA	NA	NA	72074564	72131541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
Isoform_6277_12	chr11	-	3876	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	190	junction_4	93.9730679503442	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTACATTGCCGATA	974	False	NA	-28	True	ATTAAA	-8	NA	79145498	79130217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_62770_5	chr6	+	1749	3	ISM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-13	3185	4	-654	intron_retention	FALSE	canonical	3	33	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAAGAAG	8313	False	NA	NA	False	NA	NA	NA	72324303	72326946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_72324499_72324575_72324695_72325511
Isoform_62771_12	chr6	+	1414	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	6	3185	6	-654	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAAGAAG	8332	False	NA	NA	False	NA	NA	NA	72324322	72326946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
Isoform_62772_7	chr6	+	1827	2	FSM	ENSMUSG00000058706.6	ENSMUST00000205472.2	1033	2	-6	-788	3	-654	multi-exon	FALSE	canonical	3	49	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAAGAAG	8312	False	NA	NA	False	NA	NA	NA	72324302	72326946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72324695_72325511
Isoform_62773_14	chr6	+	1515	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	27	4	0	-4	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCAGTGTGTTCTGGA	NA	False	NA	6	True	ATTAAA	-17	NA	72332456	72336741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
Isoform_62774_13	chr6	+	1544	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	0	2	0	-2	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGTGTGTTCTGGAGA	NA	False	NA	8	True	ATTAAA	-19	NA	72332429	72336743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
Isoform_62775_26	chr6	+	2917	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	6	6	6	-6	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACTACCTGGCTTAT	1287	False	NA	6	True	NA	NA	NA	72391296	72407689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
Isoform_62778_40	chr6	+	1193	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	52	2	52	0	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCCTGTGTGGCTTGT	NA	False	NA	10	True	AATAAA	-21	NA	72521425	72539964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
Isoform_62779_27	chr6	+	1245	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	150	5	-9	-3	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTTCCTGTGTGGCT	NA	False	NA	7	True	AATAAA	-18	NA	72526405	72539961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
Isoform_62781_2605	chr6	+	1962	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	127	938	-26	45	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575584	72584470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
Isoform_62782_30	chr6	+	2090	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	937	0	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	17	True	TATAAA	-22	NA	72575457	72584471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
Isoform_6279_3	chr11	-	4768	8	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	1	intron_retention	FALSE	canonical	3	351	junction_6	53.3008404421238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACATTGCCGATATTTCT	974	False	NA	-23	True	ATTAAA	-13	NA	79145498	79130212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_62790_920	chr6	+	1247	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	267	5	-3	2	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTGTGAAGACTTTT	2582	False	NA	14	True	AATAAA	-18	NA	73225631	73253889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
Isoform_62796_3	chr6	+	3386	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-13	819	-13	-160	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGCCTTGGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	81900636	81936077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_62797_8	chr6	+	3257	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-26	961	-26	-302	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGATCCTGTATTTATT	NA	False	NA	NA	False	NA	NA	NA	81900623	81935935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
Isoform_62798_24	chr6	+	1759	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	13	1	13	-1	multi-exon	FALSE	canonical	3	34	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTCGTGTCTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	82018616	82070079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_82018883_82048035_82048224_82068774
Isoform_62799_7	chr6	+	1923	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	21	1	21	-1	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923903	83007163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
Isoform_62800_3	chr6	+	2938	16	NNC	ENSMUSG00000000693.11	novel	4098	14	NA	NA	39	657	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	3.0739045022396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACTGATGCAGCGG	2268	False	NA	NA	False	TATAAA	-15	NA	83011192	83028305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83021095_83021153_83021727_83021788_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
Isoform_62801_5	chr6	+	2818	14	FSM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	39	1241	39	654	multi-exon	FALSE	canonical	2	3	junction_1	2.5903781908435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCCAGGACTGATGCAG	2268	False	NA	NA	False	TATAAA	-12	NA	83011192	83028302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
Isoform_62802_13	chr6	+	1399	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5421	False	NA	8	True	ATTAAA	-18	NA	83031709	83034662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_62803_11	chr6	+	1514	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	-20	-3	-3	-1	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5403	False	NA	8	True	ATTAAA	-18	NA	83031691	83034662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
Isoform_62805_716	chr6	+	1434	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	208	127	0	-1	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5421	False	NA	8	True	ATTAAA	-18	NA	83031709	83034662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_62806_56	chr6	+	1520	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	121	128	-4	2	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5334	False	NA	7	True	ATTAAA	-17	NA	83031622	83034661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_62807_13	chr6	+	1619	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	23	127	23	-1	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5236	False	NA	8	True	ATTAAA	-18	NA	83031524	83034662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_62809_14	chr6	+	1660	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCTGTTGCCTCTTTG	5421	False	NA	8	True	ATTAAA	-18	NA	83031709	83034662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
Isoform_6281_146	chr11	-	3030	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-1	848	-1	-848	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGGTATTTGTTTGT	NA	False	NA	-10	True	AATAAA	-17	NA	79853217	79825626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
Isoform_62813_4	chr6	+	2882	12	NNC	ENSMUSG00000009145.7	novel	3257	12	NA	NA	-45	-107	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	2.71207888912296	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTTCTATGAT	812	False	NA	NA	False	AATAAA	-12	NA	83035032	83044192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_83035121_83035470_83035717_83035897_83036092_83036419_83036808_83037148_83037383_83037471_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83041966_83043070_83043262_83043413
Isoform_62814_116	chr6	+	898	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	13	7	13	1	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTTCATCTTCC	119	False	NA	17	True	AATAAA	-9	NA	83055339	83057829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
Isoform_62815_12	chr6	+	1050	8	ISM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	233	-1	-7	1	3prime_fragment	FALSE	canonical	3	182	junction_2	10.5521058929254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTTCATCTTCC	94	False	NA	17	True	AATAAA	-9	NA	83055603	83057829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
Isoform_62816_200	chr6	+	637	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	52	6	-28	-6	multi-exon	FALSE	canonical	3	747	junction_2	17.5	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGCTATTTTTCTCA	7435	False	NA	NA	False	ATTAAA	-13	NA	83086072	83086914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83086185_83086294_83086408_83086502
Isoform_62817_217	chr6	+	2764	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	15	1	15	-1	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACCCCTTGCTTTAGAC	5188	False	NA	27	True	AATAAA	-16	NA	83092491	83095878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
Isoform_6282_36	chr11	-	3896	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-29	10	-29	-10	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAACTCATTGAGAA	NA	False	NA	-24	True	NA	NA	NA	79853245	79824788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
Isoform_62820_5	chr6	+	2536	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGACCCCTTGCTTTAG	5184	False	NA	25	True	AATAAA	-14	NA	83092487	83095876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83092908_83093608_83093806_83093957
Isoform_62822_6	chr6	+	2154	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	33	4	33	-4	multi-exon	FALSE	canonical	3	13	junction_1	17.934223251548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	3562	False	NA	14	True	ATTAAA	-14	NA	83112825	83129556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_62823_9	chr6	+	3132	12	FSM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	-55	3	-34	-3	multi-exon	FALSE	canonical	0	0	junction_1	21.3022328399382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	4772	False	NA	15	True	ATTAAA	-15	NA	83114035	83129557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_62824_50	chr6	+	2252	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-143	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	1507	False	NA	14	True	ATTAAA	-14	NA	83119229	83129556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_62827_11	chr6	+	1971	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8791	2	-1934	-2	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	1139	False	NA	16	True	ATTAAA	-16	NA	83122881	83129558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_62829_10	chr6	+	2021	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8740	3	-1985	-3	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1088	False	NA	15	True	ATTAAA	-15	NA	83122830	83129557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
Isoform_62831_293	chr6	+	4089	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	30	-1	-1	0	multi-exon	FALSE	canonical	3	372	junction_1	39.6793042772762	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	523	False	NA	NA	False	ATTAAA	-16	NA	83142931	83177099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
Isoform_62832_12	chr6	+	4175	28	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_1	89.8211910680514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	511	False	NA	NA	False	ATTAAA	-16	NA	83142919	83177099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
Isoform_62839_34	chr6	+	3096	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40008	2	-10	-2	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGCCATGTCTAATAACT	5716	False	NA	22	True	AATAAA	-23	NA	83254364	83281924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62840_244	chr6	+	1899	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	1189	0	279	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5726	False	NA	10	True	AATAAA	-20	NA	83254374	83280737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62841_95	chr6	+	2305	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	783	0	685	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5726	False	NA	8	True	NA	NA	NA	83254374	83281143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62844_18	chr6	+	1785	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	279	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5726	False	NA	10	True	AATAAA	-20	NA	83254374	83280737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62845_5	chr6	+	2215	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-24	685	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5702	False	NA	8	True	NA	NA	NA	83254350	83281143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62847_16	chr6	+	1990	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-34	279	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	5692	False	NA	10	True	AATAAA	-20	NA	83254340	83280737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62848_5	chr6	+	2375	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-15	683	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCTGGCTCTGAGTGGA	5711	False	NA	6	True	NA	NA	NA	83254359	83281141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
Isoform_62851_97	chr6	+	4293	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	30	89	10	-88	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAATGCCTTTGAAG	NA	False	NA	9	True	AATAAA	-10	NA	83303027	83320669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
Isoform_62852_5	chr6	+	4375	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	34	3	14	-2	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATCATTTATTATCTAC	NA	False	NA	95	True	ATTAAA	-18	NA	83303031	83320755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
Isoform_62855_237	chr6	+	537	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	32	1743	-13	-3	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGATGTGCCATGCTTC	381	False	NA	23	True	ATTAAA	-23	NA	83326459	83335375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
Isoform_62858_45	chr6	+	1257	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	115	junction_1	5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	83688230	83715295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83688526_83710080_83710269_83714521
Isoform_62859_6	chr6	+	1161	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	162	0	-18	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9466	False	NA	11	True	AATAAA	-19	NA	83772171	83779536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_6286_166	chr11	-	2317	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	49	30	-4	-30	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4537	False	NA	-33	True	NA	NA	NA	79971768	79937348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
Isoform_62860_58	chr6	+	1204	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	205	-4	-21	4	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCATCTTCCATACATT	9463	False	NA	17	True	AATAAA	-25	NA	83772168	83779542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_62861_3	chr6	+	1377	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	27	1	-19	1	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9285	False	NA	12	True	AATAAA	-20	NA	83771990	83779537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_62862_7	chr6	+	1298	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9465	False	NA	12	True	AATAAA	-20	NA	83772170	83779537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_62863_9	chr6	+	1252	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	18	-221	-9	1	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9502	False	NA	12	True	AATAAA	-20	NA	83772207	83779537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
Isoform_62864_78	chr6	+	2573	8	ISM	ENSMUSG00000030016.15	ENSMUST00000204202.3	2806	12	1	8821	0	3222	5prime_fragment	FALSE	canonical	3	285	junction_4	13.5405664126546	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTGAATTTAGATGTT	NA	False	NA	NA	False	AAAAAG	-38	NA	83891355	83924923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800
Isoform_62865_8	chr6	+	3120	16	ISM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-17	24548	1	-3433	5prime_fragment	FALSE	canonical	3	182	junction_11	49.9009685944739	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGGTAAGAATTTATG	NA	False	NA	NA	False	NA	NA	NA	83891356	83939083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958
Isoform_62866_4	chr6	+	4376	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_22	83.1527365755331	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891353	83963849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
Isoform_62867_6	chr6	+	4842	22	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-6	-2751	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	54.1677917203936	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAAAGAAAGGAAGC	NA	False	NA	NA	False	AGTAAA	-29	NA	83891342	83956068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975
Isoform_62869_6	chr6	+	2587	8	ISM	ENSMUSG00000030016.15	ENSMUST00000203455.3	2991	15	-12	17601	-5	3214	5prime_fragment	FALSE	canonical	3	28	junction_1	96.0869079404214	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCACAGGTAAATTGAATT	NA	False	NA	NA	False	GATAAA	-39	NA	83891343	83924915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800
Isoform_62870_969	chr6	+	2493	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-13	6	-13	-6	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	969	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85408957	85423411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
Isoform_62876_4217	chr6	+	1816	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	537	88	-1	-88	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTTTTTCATAAA	5147	False	NA	18	True	AATAAA	-16	NA	85429032	85445369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_62877_222	chr6	+	1904	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	537	0	-1	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5147	False	NA	16	True	AGTAAA	-18	NA	85429032	85445457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_62878_664	chr6	+	1876	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	478	87	-27	-87	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTTTTTCATAAAC	5088	False	NA	19	True	AATAAA	-17	NA	85428973	85445370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_62880_238	chr6	+	2369	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	-17	89	-17	-89	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGTGTTTTTCATAA	4593	False	NA	17	True	AATAAA	-15	NA	85428478	85445368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
Isoform_62904_8	chr6	+	1134	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	1	-419	1	-6	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAATTGCTAGATTTGGA	3410	False	NA	NA	False	ATTAAA	-12	NA	85892720	85905496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
Isoform_62905_20	chr6	+	2116	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-14	1	-5	-1	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTTATTAT	3404	False	NA	21	True	NA	NA	NA	85892714	85907263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_62906_48	chr6	+	855	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-13	1261	-4	-4	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3405	False	NA	NA	False	NA	NA	NA	85892715	85906003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_62907_4	chr6	+	1131	6	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	18	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.5636048052786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	3446	False	NA	NA	False	NA	NA	NA	85892756	85906003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
Isoform_62908_5	chr6	+	4505	6	FSM	ENSMUSG00000029999.15	ENSMUST00000032066.13	4527	6	14	8	-14	-8	multi-exon	FALSE	canonical	2	3	junction_4	2.89827534923789	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAATCTCAAGACTGA	NA	False	NA	NA	False	AATGAA	-13	NA	86172218	86252693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929
Isoform_6291_30	chr11	-	2315	8	NIC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	-6	-30	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	246.701505169833	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4535	False	NA	-33	True	NA	NA	NA	79971770	79937348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971613
Isoform_62911_1961	chr6	+	1604	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	39	0	-29	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8656	False	NA	32	True	AATAAA	-16	NA	86342666	86347040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86342802_86343591_86343733_86345712
Isoform_62913_70	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8617	False	NA	32	True	AATAAA	-16	NA	86342627	86347040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86342802_86343591_86343733_86345712
Isoform_6292_16	chr11	-	2348	8	NIC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	14	-30	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	246.701505169833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAAAATGAAAA	4502	False	NA	-33	True	NA	NA	NA	79971803	79937348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971613
Isoform_62920_716	chr6	+	389	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	241	425	3	-4	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGCGTTTCTGCTGTTG	NA	False	NA	25	True	AATAAA	-16	NA	86348526	86355885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
Isoform_62921_393	chr6	+	436	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	194	425	-44	-4	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGCGTTTCTGCTGTTG	NA	False	NA	25	True	AATAAA	-16	NA	86348479	86355885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
Isoform_62923_31	chr6	+	1740	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	89	2648	4	-14	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	9770	False	NA	NA	False	AATATA	-7	NA	86381289	86407739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_62925_6	chr6	+	3179	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	72	1226	0	-1	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTCTTTGTAAACT	9753	False	NA	16	True	AATAAA	-18	NA	86381272	86409161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_62926_3	chr6	+	3127	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-5	8	4	-3	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTATTTCTTTGTAAA	9770	False	NA	14	True	AATAAA	-16	NA	86381289	86409159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_62927_9	chr6	+	1709	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-7	1428	2	-14	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	9768	False	NA	NA	False	AATATA	-7	NA	86381287	86407739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
Isoform_62928_5	chr6	+	2527	10	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	-3	-6	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	9.97156450941537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATGGTGCCATTGATG	1450	False	NA	NA	False	AATAAA	-20	NA	86415352	86447364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86415466_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_62929_16	chr6	+	2484	10	FSM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	48	2	33	-2	multi-exon	FALSE	canonical	3	15	junction_1	6.73483664919633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1501	False	NA	NA	False	AATAAA	-24	NA	86415403	86447368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_62930_18	chr6	+	2570	10	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	6.89784364229722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1775	False	NA	NA	False	AATAAA	-24	NA	86415677	86447368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86415830_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_62931_3	chr6	+	2769	10	NIC	ENSMUSG00000046679.17	novel	2922	10	NA	NA	181	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.7182531580755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1987	False	NA	NA	False	AATAAA	-24	NA	86415889	86447368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
Isoform_62932_3	chr6	+	479	4	NIC	ENSMUSG00000097048.8	novel	594	5	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	40.4337592722825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86504294	86541425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86504416_86504872_86504957_86540413_86540520_86541257
Isoform_62933_7	chr6	+	2082	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	11	6	11	-5	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86503263	86541425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
Isoform_62935_4	chr6	+	2145	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	10	-5	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGTGTATTTTTA	NA	False	NA	3	True	NA	NA	NA	86503238	86541425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
Isoform_62937_52	chr6	+	1190	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986215	87005439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_62941_593	chr6	+	898	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	50	2	-3	-2	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986867	87005439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_62942_10	chr6	+	1550	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	-602	2	-2	-2	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986215	87005439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_62944_65	chr6	+	898	8	FSM	ENSMUSG00000029993.17	ENSMUST00000032060.15	948	8	53	-3	0	-2	multi-exon	FALSE	canonical	0	0	junction_5	1005.23440255576	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986870	87005439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
Isoform_62946_14	chr6	+	2313	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	4	3921	0	34	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTATTCCACTCAACT	9949	False	NA	NA	False	AGTAAA	-19	NA	87019831	87065258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
Isoform_62947_6	chr6	+	6234	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	4	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9949	False	NA	14	True	AATAAA	-15	NA	87019831	87069179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
Isoform_62949_1747	chr6	+	2983	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	104	1053	-10	12	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCGTCTCATCCCTA	NA	False	NA	13	True	AATAAA	-33	NA	87864899	87889524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_62950_266	chr6	+	4020	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	114	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGGTGTCAGCCTC	NA	False	NA	NA	False	AATAAA	-9	NA	87864909	87890571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_62953_29	chr6	+	3039	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	33	1068	33	-3	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864828	87889509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
Isoform_6296_197	chr11	-	1280	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	32	-3	0	3	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTCTTTGCTTAAGTT	NA	False	NA	-1	True	AATAAA	-17	NA	80032969	80027500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
Isoform_62963_584	chr6	+	1383	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	61	20	17	-20	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	3025	False	NA	24	True	AATAAA	-10	NA	87890977	87913591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_62964_100	chr6	+	1455	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	-8	17	-8	-17	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGCTGGCAAGAGTT	2956	False	NA	27	True	AATAAA	-13	NA	87890908	87913594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_6297_21	chr11	-	1531	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGCCTTCTTTGCT	NA	False	NA	-7	True	AATAAA	-11	NA	80032979	80027506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
Isoform_62970_3503	chr6	+	2261	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	32	1340	32	577	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	3503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	569	False	NA	14	True	AATAAA	-20	NA	88061495	88080946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
Isoform_62972_213	chr6	+	2294	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	-2	1341	-2	576	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGCTGTACTGAAAA	535	False	NA	13	True	AATAAA	-19	NA	88061461	88080945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
Isoform_6298_4	chr11	-	793	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	4	1150	4	118	5prime_fragment	FALSE	canonical	3	265	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGGATGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80032997	80028653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_80028894_80030691_80031150_80032902
Isoform_62982_9	chr6	+	3301	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	-170	4	-170	-2	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTGTCGCCTGTTGA	NA	False	NA	10	True	AATAAA	-11	NA	88170702	88184010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_62985_326	chr6	+	2708	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	330	533	330	-533	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCACAGTCCTTTGAGTG	NA	False	NA	16	True	AATAAA	-24	NA	88175645	88183479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_62986_161	chr6	+	3240	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	330	1	330	-1	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCGCCTGTTGAG	NA	False	NA	11	True	AATAAA	-12	NA	88175645	88184011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
Isoform_62992_833	chr6	+	1636	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	33	6	33	-6	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	NA	False	NA	25	True	AATAAA	-25	NA	88442423	88474548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
Isoform_62994_4	chr6	+	1341	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	17	2318	17	52	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88701410	88803024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
Isoform_62995_16	chr6	+	1764	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	-26	0	8	0	multi-exon	TRUE	canonical	3	57	junction_1	17.59319928714	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	False	NA	12	True	AATAAA	-14	NA	88879288	88889213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
Isoform_62997_72	chr6	+	2759	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-9	86	-9	-86	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTGATCTAATTCGT	NA	False	NA	5	True	ATTAAA	-16	NA	89620960	89652425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
Isoform_62999_3	chr6	+	2826	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-5	15	-5	-15	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCCTGTATTT	NA	False	NA	76	True	ACTAAA	-4	NA	89620964	89652496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
Isoform_63_202	ERCC-00076	+	624	1	FSM	ERCC-00076A	DQ883650	626	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00076_+_0_600
Isoform_63000_15	chr6	+	2452	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	110	2302	-6	-321	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTCTTTTGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	90346583	90359764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_63001_3	chr6	+	2876	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	10	1978	8	3	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGAGTCTGACTTTCC	NA	False	NA	NA	False	NA	NA	NA	90346483	90360088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_63002_4	chr6	+	2526	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	29	2309	27	-328	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCTAAGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	90346502	90359757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
Isoform_63004_12	chr6	+	2233	7	ISM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	114	19274	0	1	5prime_fragment	FALSE	canonical	3	63	junction_6	15.9024805891688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAGCAGAAAGGA	NA	False	NA	NA	False	GGGGCT	-37	NA	90346589	90361198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149
Isoform_63005_8	chr6	+	4008	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	115	3	1	-3	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCGCTGCTTTC	NA	False	NA	9	True	AATAAA	-22	NA	90346590	90380469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
Isoform_63006_5	chr6	+	4085	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	35	6	35	-6	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGCTTTTGCGCTGCT	NA	False	NA	6	True	AATAAA	-19	NA	90346510	90380466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
Isoform_63008_5	chr6	+	4088	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.125398548883	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTGCGCTGCTTTC	NA	False	NA	9	True	AATAAA	-22	NA	90346563	90380469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359502_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
Isoform_63009_966	chr6	+	2336	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	21	16	21	1	multi-exon	FALSE	canonical	3	353	junction_2	6.5	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACTCTACC	NA	False	NA	12	True	AATAAA	-8	NA	90439578	90452204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90439708_90443401_90444506_90451101
Isoform_6301_6	chr11	-	3564	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	19	971	0	-971	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80268841	80252289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
Isoform_63010_54	chr6	+	2371	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	-23	25	-23	-8	multi-exon	FALSE	canonical	3	353	junction_2	6.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGGAAAAAAAAAAAG	NA	False	NA	3	True	CATAAA	-23	NA	90439534	90452195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90439708_90443401_90444506_90451101
Isoform_63016_8	chr6	+	3097	23	Fusion	ENSMUSG00000030088.16_ENSMUSG00000108111.2	novel	653	5	NA	NA	-4	4	multi-exon	FALSE	canonical	0	0	junction_1	47.2324128797829	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	745	False	NA	8	True	AATAAA	-18	NA	90463370	90576146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr6_+_90463514_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_63017_306	chr6	+	3051	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-4	5	-4	4	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	NA	False	NA	8	True	AATAAA	-18	NA	90527782	90576146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_63018_117	chr6	+	3119	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	22	1034	6	0	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527792	90576151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_63019_12	chr6	+	1702	12	ISM	ENSMUSG00000030088.16	ENSMUST00000204796.3	3025	23	20904	-4	4046	4	3prime_fragment	FALSE	canonical	3	182	junction_2	18.1799999090818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	7923	False	NA	8	True	AATAAA	-18	NA	90548733	90576146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_63020_8	chr6	+	2234	12	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	150	-6	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_2	18.656087123962	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	90581856	90623388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
Isoform_63021_16	chr6	+	2192	12	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	192	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	18.656087123962	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	90581898	90623388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
Isoform_63022_19	chr6	+	1420	6	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	16177	6	16177	-6	3prime_fragment	FALSE	canonical	3	32	junction_4	8.27042925125413	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAACTCGGTGTCCTCCA	2829	False	NA	NA	False	AATAAA	-11	NA	90612305	90623388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
Isoform_63023_25	chr6	+	2504	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	145	4	-8	-4	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGCAGCTGCCCA	NA	False	NA	25	True	AATAAA	-27	NA	91133791	91151670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
Isoform_63024_16	chr6	+	2602	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	42	9	42	-9	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTTAACCAGGGCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	91133688	91151665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
Isoform_63025_5	chr6	+	2526	10	NNC	ENSMUSG00000034245.11	novel	2653	10	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.36153564813317	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGGGCAGCTGCCCAA	NA	False	NA	26	True	AATAAA	-28	NA	91133768	91151671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149148_91149326_91150030
Isoform_63026_8	chr6	+	4299	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	339	6	-28	-6	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTATTCAGTCTCTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	91189775	91249515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
Isoform_6303_25	chr11	-	1383	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	19	3152	0	334	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAATGTCTTCACCAGGT	NA	False	NA	-19	True	ATTAAA	-12	NA	80268841	80254470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
Isoform_63030_4	chr6	+	2982	15	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	38319	11	-5227	-11	3prime_fragment	FALSE	canonical	3	11	junction_5	4.6246897303539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGTTATTCAGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	91227755	91249510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
Isoform_63031_313	chr6	+	2895	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	4	4	4	-4	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	9692	False	NA	NA	False	AATAAA	-26	NA	91450688	91465441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
Isoform_63033_5	chr6	+	774	2	FSM	ENSMUSG00000034192.6	ENSMUST00000123569.3	504	2	-17	-253	-17	-236	multi-exon	FALSE	canonical	3	1484	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	91493011	91494754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91493061_91494029
Isoform_63034_436	chr6	+	633	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	-13	-2	-12	2	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTAATGTG	NA	False	NA	44	True	ATTAAA	-20	NA	91493016	91499604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
Isoform_63035_33	chr6	+	694	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	49	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91492958	91499607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
Isoform_63037_22	chr6	+	2708	16	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	4	2713	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	119.724387193624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	91661053	91732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_91661290_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_63039_282	chr6	+	2592	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	19	3575	3	2713	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	91661052	91732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_63040_615	chr6	+	2559	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	52	3575	10	2713	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	91661085	91732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_63045_17	chr6	+	2547	14	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	4	2713	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.8156288529688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	91661053	91732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_91661290_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_63046_32	chr6	+	2480	14	NIC	ENSMUSG00000030096.9	novel	738	6	NA	NA	0	2713	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	98.2890917758943	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATGAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	91678637	91732472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
Isoform_63047_8	chr6	+	328	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	13	3639	-6	837	multi-exon	FALSE	canonical	3	200	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACTCCTGAGCGGGAA	NA	False	NA	NA	False	NA	NA	NA	91855046	91858329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91855168_91857237_91857343_91858227
Isoform_63048_3	chr6	+	848	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	40	3092	18	1384	multi-exon	FALSE	canonical	3	200	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAATAATTCAG	NA	False	NA	NA	False	NA	NA	NA	91855073	91858876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91855168_91857237_91857343_91858227
Isoform_6305_4	chr11	-	3029	19	ISM	ENSMUSG00000035441.15	ENSMUST00000070997.6	3106	21	-2	8761	-2	-8761	5prime_fragment	FALSE	canonical	1	2	junction_13	2.72448885227538	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTTTTTTTTTTCATT	NA	False	NA	NA	False	AATAAA	-29	NA	80670853	80483413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
Isoform_63054_4	chr6	+	1481	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	21	250	-1	-250	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCTGGTTGTATTTG	NA	False	NA	9	True	TATAAA	-19	NA	91855054	91876574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
Isoform_63055_13	chr6	+	1901	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	21	0	-21	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATACTTCCTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	94477311	94581632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
Isoform_63056_13	chr6	+	1098	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	824	0	-14	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGGCCCTTCAGAATG	NA	False	NA	NA	False	AATAAA	-18	NA	94477311	94580829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
Isoform_63059_5	chr6	+	1864	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	-8	-21	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATACTTCCTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	94477303	94581632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
Isoform_6306_4	chr11	-	3602	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	33	-2	33	2	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2776	False	NA	NA	False	AATAAA	-13	NA	82762003	82694645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
Isoform_63060_7	chr6	+	4620	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	180	69	40	-69	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTCATGTCATGTAG	NA	False	NA	21	True	ATTAAA	-18	NA	95094900	95106702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_63061_10	chr6	+	4551	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	179	139	39	-139	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGCCAGTGTTGTAA	NA	False	NA	4	True	AATAAA	-14	NA	95094899	95106632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
Isoform_63062_132	chr6	+	1329	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	106	7	106	-7	multi-exon	FALSE	canonical	3	281	junction_2	50	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAGTTCTGTCTATAT	8554	False	NA	3	True	AATAAA	-14	NA	97187755	97210269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_97187958_97206497_97206716_97209360
Isoform_63063_37	chr6	+	1398	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	105	-61	105	61	multi-exon	FALSE	canonical	3	281	junction_2	50	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGTTTAGATTT	8553	False	NA	71	True	AATAAA	-20	NA	97187754	97210337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_97187958_97206497_97206716_97209360
Isoform_63064_27	chr6	+	2922	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	26	1926	26	386	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGAGTACATTTTTA	9686	False	NA	21	True	AATAAA	-15	NA	100810608	100844969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
Isoform_63066_41	chr6	+	2239	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-30	-811	-5	-9	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCATTCTTTGTCGT	NA	False	NA	3	True	AATAAA	-12	NA	106746096	106759426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_63068_5	chr6	+	2346	10	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-7	-11	intron_retention	FALSE	canonical	3	16	junction_3	364.812585065568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATTTCATTCTTTGTC	NA	False	NA	1	True	AATAAA	-10	NA	106746166	106759424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_106746218_106746790_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_6307_14	chr11	-	3480	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	12	-3	12	3	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2755	False	NA	NA	False	AATAAA	-14	NA	82762024	82694644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
Isoform_63071_154	chr6	+	2249	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	25	9	21	-9	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCATTCTTTGTCGT	NA	False	NA	3	True	AATAAA	-12	NA	106746151	106759426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_63074_86	chr6	+	2207	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	2	-811	2	-9	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCATTCTTTGTCGT	NA	False	NA	3	True	AATAAA	-12	NA	106746128	106759426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
Isoform_63076_15	chr6	+	1623	2	FSM	ENSMUSG00000034639.8	ENSMUST00000049246.7	1612	2	-6	-5	-6	5	multi-exon	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGATCTTATTACTTGT	NA	False	NA	11	True	AATAAA	-21	NA	108041999	108054088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108042201_108052666
Isoform_63077_4	chr6	+	847	4	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	3	309438	3	-136132	5prime_fragment	FALSE	canonical	3	46	junction_3	9.67241208569794	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108190059	108218632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224
Isoform_63079_4	chr6	+	2826	22	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	0	163723	0	-5614	5prime_fragment	TRUE	canonical	3	45	junction_5	7.52320672690724	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAAATTAAGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	108190056	108364347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324
Isoform_63081_285	chr6	+	2937	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	23	153	23	-153	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAATGGTCTCCTTGGT	NA	False	NA	9	True	AATAAA	-21	NA	108637612	108643733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
Isoform_63082_6	chr6	+	3148	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-186	151	-186	-151	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGGTCTCCTTGGTTT	NA	False	NA	11	True	AATAAA	-23	NA	108637403	108643735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
Isoform_63084_12	chr6	+	3062	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-104	155	-104	-155	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAAATGGTCTCCTTG	NA	False	NA	7	True	AATAAA	-19	NA	108637485	108643731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
Isoform_63089_177	chr6	+	2727	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-9	1725	-9	-1725	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTTACCTTAAAATGT	NA	False	NA	24	True	AATAAA	-24	NA	108760050	108800514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_63090_41	chr6	+	1623	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-47	2867	-47	638	multi-exon	TRUE	canonical	3	458	junction_6	33.5480583972042	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACGTCTGTTCTTTGTC	NA	False	NA	NA	False	AATAAA	-30	NA	108760012	108799372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_63091_82	chr6	+	2901	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-15	1557	-15	-1557	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTATCATGGTCCCC	NA	False	NA	14	True	AATAAA	-18	NA	108760044	108800682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
Isoform_63099_16	chr6	+	5848	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-33	2	0	-2	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCACTGTGTTTCT	NA	False	NA	8	True	ATTAAA	-13	NA	108805601	108836307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
Isoform_6310_3	chr11	-	1729	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	-26	1786	-26	-1	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGTGTGTTAATGTAT	2717	False	NA	-9	True	TTTAAA	-17	NA	82762062	82696433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
Isoform_63100_4	chr6	+	5944	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-119	-8	-86	0	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805515	108836317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
Isoform_63101_3	chr6	+	1676	6	FSM	ENSMUSG00000057604.10	ENSMUST00000032376.6	1730	6	52	2	52	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.67332005306815	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACACTTTTATCTCGTT	NA	False	NA	NA	False	AATAAA	-23	NA	112250770	112307384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_112250934_112282009_112282099_112287446_112287703_112292536_112292873_112305623_112305840_112306768
Isoform_63103_16	chr6	+	696	4	NIC	ENSMUSG00000030264.15	novel	649	3	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	301.439877919296	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTGTTGTTTTTC	NA	False	NA	30	True	ATTAAA	-24	NA	113023306	113028000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717
Isoform_63107_190	chr6	+	2072	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	91	0	1	0	multi-exon	FALSE	canonical	3	600	junction_1	54.2445309298778	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023276	113045234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_63108_8	chr6	+	2115	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	48	0	-29	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023233	113045234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_6311_14	chr11	-	3372	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	35	2	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2778	False	NA	NA	False	AATAAA	-13	NA	82762001	82694645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
Isoform_63111_17	chr6	+	2082	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAGTGTATGGAAGCGT	NA	False	NA	-3	True	ATTAAA	-10	NA	113023329	113045228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
Isoform_63115_3	chr6	+	2136	14	NIC	ENSMUSG00000034269.13	novel	3334	18	NA	NA	7	346	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	22.1129430090323	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAGAAGAAGAAGAAA	8046	False	NA	NA	False	NA	NA	NA	113054528	113095238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218
Isoform_63116_4	chr6	+	2141	13	NIC	ENSMUSG00000034269.13	novel	3334	18	NA	NA	2	343	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	17.8346962096047	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAACCAGAAGAAGAAG	7845	False	NA	NA	False	NA	NA	NA	113054327	113095235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218
Isoform_63117_3	chr6	+	4319	9	ISM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	11161	-1595	-4323	-5	3prime_fragment	FALSE	canonical	3	33	junction_7	24.8935232540514	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGTTAACAATGTGTT	NA	False	NA	18	True	NA	NA	NA	113097986	113130391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
Isoform_6312_10	chr11	-	3435	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2714	False	NA	NA	False	AATAAA	-12	NA	82762065	82694646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
Isoform_63121_1090	chr6	+	2467	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	18	191	10	5	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTAGCATTTCATC	1986	False	NA	18	True	AATAAA	-19	NA	113214821	113258162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_63122_25	chr6	+	2654	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	18	4	10	1	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATTCTCAGTCCCCA	1986	False	NA	NA	False	NA	NA	NA	113214821	113258349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_63123_58	chr6	+	2422	19	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	1	combination_of_known_junctions	TRUE	canonical	3	24	junction_17	81.7724183026387	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTTTCATTAGCATTT	1986	False	NA	14	True	AATAAA	-15	NA	113214821	113258158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
Isoform_63124_161	chr6	+	2307	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	76.4492277859348	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTTTCATTAGCATTT	1986	False	NA	14	True	AATAAA	-15	NA	113214821	113258158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
Isoform_63129_64	chr6	+	2314	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	88.3270111554443	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTTTCATTAGCATTT	1986	False	NA	14	True	AATAAA	-15	NA	113214821	113258158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
Isoform_63133_3	chr6	+	1800	16	NIC	ENSMUSG00000030270.12	novel	2115	21	NA	NA	1383	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	5.73643327047972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTCTCATGGGT	NA	False	NA	1	True	AATAAA	-12	NA	113260708	113281785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113260944_113261345_113261423_113266945_113267010_113267127_113267232_113267365_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
Isoform_63134_3	chr6	+	1600	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	0	1	0	-1	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACGCAGTGAAGAGTGA	2335	False	NA	9	True	AATAAA	-18	NA	113303959	113311144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_63135_28	chr6	+	1522	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	24	3	-3	1	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2332	False	NA	11	True	AATAAA	-20	NA	113303956	113311146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_63136_5	chr6	+	2193	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	32	-676	-4	-204	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCAGCACTTTCAT	2340	False	NA	NA	False	NA	NA	NA	113303964	113311825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_63138_4	chr6	+	1632	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-88	5	-88	-1	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACGCAGTGAAGAGTGA	2220	False	NA	9	True	AATAAA	-18	NA	113303844	113311144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
Isoform_6314_54	chr11	-	2241	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	1186	-1	852	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGGCCATCCATCTG	NA	False	NA	-11	True	AATAAA	-22	NA	82781441	82768710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_63140_3	chr6	+	1368	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2335	False	NA	11	True	AATAAA	-20	NA	113303959	113311146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
Isoform_63141_1744	chr6	+	1398	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	77	795	-1	1	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	39	True	ATTAAA	-31	NA	113355152	113366614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
Isoform_63142_141	chr6	+	1471	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	3	796	3	0	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113355078	113366613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
Isoform_63152_4	chr6	+	3701	12	ISM	ENSMUSG00000030276.20	ENSMUST00000032414.11	3168	13	266	4	227	0	intron_retention	FALSE	canonical	2	2	junction_1	6.38308715692435	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAAAGTTCTCTGGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	113369684	113391544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
Isoform_63153_9	chr6	+	3580	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-127	18	-127	3	intron_retention	FALSE	canonical	3	13	junction_6	3.96106046406767	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	113369993	113391526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
Isoform_63154_226	chr6	+	1164	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	34	3	-7	-3	multi-exon	FALSE	canonical	3	705	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCGTGTTGGAGATTT	NA	False	NA	30	True	AATAAA	-34	NA	113419563	113425187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113419759_113424218
Isoform_63156_11	chr6	+	1164	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	-5	-12	-5	-8	multi-exon	FALSE	canonical	3	96	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCTCGTGTTGGA	NA	False	NA	25	True	AATAAA	-29	NA	113419565	113425182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113419766_113424218
Isoform_63157_76	chr6	+	2300	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTAGCACTCGTGT	5827	False	NA	3	True	AATAAA	-18	NA	113448458	113460098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_63158_19	chr6	+	2333	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	40	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGCACTCGTGTAT	5796	False	NA	5	True	AATAAA	-20	NA	113448427	113460100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_6316_31	chr11	-	2634	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	793	-1	-793	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACAAGACCTT	NA	False	NA	NA	False	AATAAA	-14	NA	82781441	82768317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_63160_7	chr6	+	2245	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	103	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	10.3632969597244	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGCACTCGTGTATCT	5859	False	NA	7	True	AATAAA	-22	NA	113448490	113460102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_63161_19	chr6	+	2257	17	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	10.8137643769411	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTAGCACTCGTGTAT	5827	False	NA	5	True	AATAAA	-20	NA	113448458	113460100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
Isoform_63162_38	chr6	+	2285	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	14	7	14	-4	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGGAAAAGCTTCAGT	1471	False	NA	6	True	AATAAA	-12	NA	113460271	113470292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
Isoform_63163_254	chr6	+	2039	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	267	0	141	0	multi-exon	FALSE	canonical	3	165	junction_1	17.0945085399441	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1724	False	NA	13	True	AATAAA	-19	NA	113460524	113470299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
Isoform_63166_3	chr6	+	764	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	-11	1389	11	-506	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGTCTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	113508653	113514291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
Isoform_63167_4	chr6	+	2077	9	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-6	49836	-6	-7553	5prime_fragment	FALSE	canonical	3	301	junction_6	34.8045884187703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	113508658	113523398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970
Isoform_6317_55	chr11	-	1495	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	1932	-1	106	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTGTCCTGGTCCTGT	NA	False	NA	-1	True	AAGAAA	-18	NA	82781441	82769456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
Isoform_63170_14	chr6	+	4756	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	27	729	5	15	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113508669	113573249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
Isoform_63171_11	chr6	+	5514	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	0	-2	0	2	multi-exon	TRUE	canonical	3	237	junction_19	37.6323336574577	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508642	113573980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
Isoform_63172_3	chr6	+	4728	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-11	-10	11	10	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTACCTTTTTCCTC	NA	False	NA	17	True	AATAAA	-18	NA	113508653	113573244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
Isoform_63173_204	chr6	+	1107	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	2	-14	-2	multi-exon	FALSE	canonical	3	441	junction_2	10.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTATGATCTG	NA	False	NA	9	True	AATAAA	-19	NA	113581718	113593910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_63174_567	chr6	+	854	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-14	255	-14	-255	multi-exon	FALSE	canonical	3	441	junction_2	10.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGACTGTGGTGGCAA	NA	False	NA	24	True	AATAAA	-17	NA	113581718	113593657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_63175_8	chr6	+	902	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-64	257	-64	-257	multi-exon	FALSE	canonical	3	441	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGACTGTGGTGGC	NA	False	NA	22	True	AATAAA	-15	NA	113581668	113593655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113581858_113592736_113592820_113593025
Isoform_63178_253	chr6	+	2748	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	41	3	41	-3	multi-exon	FALSE	canonical	3	134	junction_1	12	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTACTGTGTTGTGTTA	199	False	NA	16	True	AATAAA	-16	NA	113600960	113608591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113601340_113605052_113605176_113606345
Isoform_63181_10	chr6	+	3170	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	11	15	-10	2	multi-exon	FALSE	canonical	2	5	junction_1	6.70820393249937	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	NA	False	NA	11	True	AATAAA	-16	NA	113615438	113671972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
Isoform_63182_16	chr6	+	1829	3	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	16983	-1211	-3984	0	3prime_fragment	FALSE	canonical	3	24	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGCTGTCTTATAATTT	3008	False	NA	9	True	AATAAA	-14	NA	113663721	113671970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_113663920_113667743_113668033_113670628
Isoform_63184_12	chr6	+	3239	8	FSM	ENSMUSG00000056952.14	ENSMUST00000204753.3	2645	8	-474	-120	40	0	multi-exon	FALSE	canonical	0	0	junction_7	1.95875845725744	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACATGTGGATATATATAA	1015	False	NA	12	True	AATAAA	-18	NA	113674050	113688030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_113674563_113674667_113675079_113679061_113679683_113680994_113681868_113684226_113684355_113686420_113686605_113687001_113687176_113687694
Isoform_63185_62	chr6	+	4154	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	141	7	-14	-7	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTATTGGTTACTTT	NA	False	NA	5	True	AATAAA	-13	NA	114259736	114294486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
Isoform_63188_5	chr6	+	2507	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	41.3278356558869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGGGCTCAGGTCCTT	NA	False	NA	4	True	NA	NA	NA	114620093	114836183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_114620112_114623897_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_63189_3	chr6	+	2557	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	-14	0	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620075	114836185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_6319_6	chr11	-	1682	13	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	66.8112494686004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8336	False	NA	-10	True	AATAAA	-18	NA	82799204	82791597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63190_58	chr6	+	2394	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620087	114836185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_63191_10	chr6	+	3113	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-1	-675	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114620081	114836898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_63192_33	chr6	+	2341	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	30	1390	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620087	114836185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_63193_4	chr6	+	3060	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	25	676	0	-674	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114620082	114836899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
Isoform_63198_4	chr6	+	606	4	FSM	ENSMUSG00000042389.14	ENSMUST00000130425.8	638	4	31	1	-7	-1	multi-exon	FALSE	canonical	3	175	junction_1	54.9201440477192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCTCCCAGCCTTGC	NA	False	NA	NA	False	TATAAA	-22	NA	115521655	115531232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951
Isoform_63199_115	chr6	+	1777	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	36	293	-2	-293	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTGAGAGAATAAAT	NA	False	NA	13	True	AATAAA	-13	NA	115521660	115555296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
Isoform_63200_16	chr6	+	1696	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-3	-293	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTGAGAGAATAAAT	NA	False	NA	13	True	AATAAA	-13	NA	115521659	115555296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
Isoform_63204_318	chr6	+	2258	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	31	3941	-28	-3941	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGTATTCCTGGCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	115578893	115595644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
Isoform_63211_19	chr6	+	4776	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	35	663	35	-663	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACAGTCAACCCTTC	NA	False	NA	43	True	AATAAA	-40	NA	115751533	115781855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
Isoform_63215_8	chr6	+	4013	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	105	4	-5	0	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830535	115903656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_63219_8	chr6	+	3092	20	ISM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	33753	4	83	0	3prime_fragment	FALSE	canonical	3	39	junction_19	8.12062795219373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115864183	115903656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
Isoform_6322_379	chr11	-	1742	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	37	4	-32	0	multi-exon	FALSE	canonical	3	193	junction_4	34.6180548590215	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8340	False	NA	-10	True	AATAAA	-18	NA	82799200	82791597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63222_6	chr6	+	2709	24	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	-35	8479	-35	-865	5prime_fragment	TRUE	canonical	3	253	junction_1	36.4306835921909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAGGGTTAGTCCC	NA	False	NA	NA	False	NA	NA	NA	116184963	116231168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050
Isoform_63227_59	chr6	+	4279	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	9	19	1	2	multi-exon	FALSE	canonical	3	196	junction_27	51.0355975983648	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185007	116239628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_63229_22	chr6	+	4172	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185050	116239627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_63230_6	chr6	+	2666	23	ISM	ENSMUSG00000024104.12	ENSMUST00000204476.3	2861	25	79	865	3	-865	5prime_fragment	FALSE	canonical	3	278	junction_14	33.6386977077157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAGGGTTAGTCCC	NA	False	NA	NA	False	NA	NA	NA	116185085	116231168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050
Isoform_63231_6	chr6	+	2768	24	ISM	ENSMUSG00000024104.12	ENSMUST00000204476.3	2861	25	76	572	0	-572	5prime_fragment	FALSE	canonical	3	278	junction_14	32.9535962909455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTCTCAGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	116185082	116231461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373
Isoform_63233_5	chr6	+	4222	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	101	junction_25	57.5563942616992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185077	116239625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
Isoform_63234_5	chr6	+	2845	7	NIC	ENSMUSG00000042213.18	novel	3123	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTTTATTTGATTAT	NA	False	NA	NA	False	AATAAA	-13	NA	116241170	116307260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_116241274_116250533_116250834_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
Isoform_63235_7	chr6	+	4596	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	9	6	-2	-4	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTTGTGATGAGAG	NA	False	NA	4	True	AATAAA	-14	NA	116315002	116386495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
Isoform_63236_24	chr6	+	1137	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-38	-1	23	0	multi-exon	FALSE	canonical	3	26	junction_1	15	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818164	117822917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117818230_117820213_117820354_117821985
Isoform_63238_3	chr6	+	1141	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112859.8	421	3	24	-744	23	0	multi-exon	FALSE	canonical	3	13	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818164	117822917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117818230_117820213_117820358_117821985
Isoform_63239_16	chr6	+	1199	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	3	-543	3	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818231	117822917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117818359_117820213_117820354_117821985
Isoform_6324_11	chr11	-	1758	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-27	0	intron_retention	TRUE	canonical	3	35	junction_3	68.7710298414568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8345	False	NA	-6	True	AATAAA	-22	NA	82799195	82791593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82791877_82792382_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63241_4	chr6	+	495	3	ISM	ENSMUSG00000042097.18	ENSMUST00000134619.8	786	4	10	1263	3	-222	5prime_fragment	FALSE	canonical	3	15	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGACCCATGGTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	117840047	117846437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_117840104_117843355_117843536_117846178
Isoform_63242_12	chr6	+	2615	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	18	525	11	1	multi-exon	FALSE	canonical	3	13	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	False	NA	13	True	TTTAAA	-7	NA	117840055	117849727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117840104_117846178_117846235_117847216
Isoform_63243_6	chr6	+	2560	2	FSM	ENSMUSG00000042097.18	ENSMUST00000112857.3	538	2	0	-2022	0	-9	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTGACCGTCCAATG	NA	False	NA	3	True	NA	NA	NA	117840044	117849717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117840104_117847216
Isoform_63244_89	chr6	+	2310	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	-38	-1	-22	0	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117877262	117902583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
Isoform_63249_3412	chr6	+	2156	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-7	-2	-2	0	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	3412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	3727	False	NA	NA	False	AATAAA	-16	NA	117883748	117902582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
Isoform_6325_10	chr11	-	1816	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	1	intron_retention	FALSE	canonical	3	193	junction_3	35.3303184950076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGCAGCTTCTTGTT	8348	False	NA	-9	True	AATAAA	-19	NA	82799192	82791596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82791877_82792382_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63256_747	chr6	+	2486	4	NIC	ENSMUSG00000042079.14	novel	391	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	3767	False	NA	NA	False	AATAAA	-17	NA	117883788	117902583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
Isoform_6326_5	chr11	-	1663	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-23	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	77.9636490841238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGCAGCTTCTTGTT	8349	False	NA	-9	True	AATAAA	-19	NA	82799191	82791596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82791877_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63264_563	chr6	+	2176	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	20	-1240	20	0	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117893961	117902583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
Isoform_63269_723	chr6	+	2276	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	3	1	3	1	multi-exon	FALSE	canonical	3	4878	junction_1	99	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCACAGCTTATGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	117894257	117902581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_117894560_117896059_117896121_117900668
Isoform_6327_6	chr11	-	2187	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	-1	intron_retention	FALSE	canonical	3	35	junction_3	69.7512700201329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATGTTGCAGCTTCTTG	8336	False	NA	-11	True	AATAAA	-17	NA	82799204	82791598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82792454_82792534_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63274_74	chr6	+	2270	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-38	-5	-38	5	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118043341	118067537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_63276_3	chr6	+	3230	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-28	-975	-28	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043351	118068507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_63277_4	chr6	+	1724	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-81	584	-81	-513	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCAGCCTTTGGCGCTTA	NA	False	NA	NA	False	AAAAAG	-20	NA	118043298	118066948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
Isoform_63278_4	chr6	+	2515	12	NIC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-79	1	intron_retention	FALSE	canonical	3	24	junction_10	5.7653854529847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	118043300	118067533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066469_118066776
Isoform_6328_8	chr11	-	2266	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	19	0	intron_retention	FALSE	canonical	3	193	junction_3	36.097892614939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8322	False	NA	-10	True	AATAAA	-18	NA	82799218	82791597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63280_20	chr6	+	1881	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	25	1407	-10	3	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGGGTTTTGTTCCT	NA	False	NA	12	True	AGTAAA	-19	NA	119152238	119197170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
Isoform_63281_8	chr6	+	1953	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGGGGTTTTGTTCCTT	NA	False	NA	13	True	AGTAAA	-20	NA	119152236	119197171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
Isoform_63282_7	chr6	+	1901	11	FSM	ENSMUSG00000030166.15	ENSMUST00000161816.8	1603	11	2	-300	2	-19	multi-exon	FALSE	canonical	3	22	junction_8	12.9769025580067	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-30	NA	119879690	119898576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767
Isoform_6329_12	chr11	-	2269	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	0	intron_retention	FALSE	canonical	3	35	junction_2	72.0513705629532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8336	False	NA	-10	True	AATAAA	-18	NA	82799204	82791597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63290_4	chr6	+	5097	27	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	-9	12619	-9	-88	5prime_fragment	FALSE	canonical	3	38	junction_13	6.86093909075868	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAATTAAAAT	NA	False	NA	NA	False	GATAAA	-3	NA	120341075	120408916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773
Isoform_63291_431	chr6	+	3111	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-26	3840	0	-3840	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAAGACCTGATGTTT	NA	False	NA	9	True	AATAAA	-20	NA	120813172	120865963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
Isoform_63294_5	chr6	+	3042	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	6	-3833	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	84.4454853737013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGATGTTTTGAATGT	NA	False	NA	16	True	AATAAA	-27	NA	120813178	120865970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120853163_120853308_120863638
Isoform_63295_5	chr6	+	3013	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	0	-3830	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	77.7061130156438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTTGAATGTCCT	NA	False	NA	19	True	AATAAA	-30	NA	120813172	120865973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120863638
Isoform_63298_3	chr6	+	3850	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	237	6	6	1	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTCATCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	121160862	121173145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
Isoform_63299_3	chr6	+	3760	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	254	79	23	-72	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAAGATTTTTATATT	NA	False	NA	NA	False	NA	NA	NA	121160879	121173072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
Isoform_633_6	chr10	-	1417	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	-3	1174	-3	151	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGACAGTTGTTTTAT	NA	False	NA	-4	True	TATAAA	-17	NA	5773913	5763060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
Isoform_6330_14	chr11	-	2337	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	0	intron_retention	FALSE	canonical	3	193	junction_2	37.0264770130781	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8336	False	NA	-6	True	AATAAA	-22	NA	82799204	82791593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
Isoform_63300_6	chr6	+	3874	5	FSM	ENSMUSG00000067825.12	ENSMUST00000120066.8	3861	5	-12	-1	-12	1	multi-exon	FALSE	canonical	2	7	junction_4	16.7406690427832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTCATCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	121160835	121173145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170473
Isoform_63301_9	chr6	+	4604	36	FSM	ENSMUSG00000030111.10	ENSMUST00000032203.9	4605	36	4	-3	4	3	multi-exon	FALSE	canonical	3	32	junction_3	9.3958740402153	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCATTAACTGAGTTG	NA	False	NA	30	True	AATAAA	-28	NA	121613190	121656189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121617943_121617965_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
Isoform_63304_970	chr6	+	2229	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	270	16	-9	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2934	False	NA	-10	True	AATATA	-29	NA	122285948	122294623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_63305_160	chr6	+	2289	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	210	16	-69	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2874	False	NA	-10	True	AATATA	-29	NA	122285888	122294623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_63307_48	chr6	+	2554	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	-55	16	-55	-16	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACACGCTGG	2609	False	NA	-10	True	AATATA	-29	NA	122285623	122294623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
Isoform_63316_7	chr6	+	594	5	ISM	ENSMUSG00000030116.15	ENSMUST00000142896.8	425	9	8162	-297	-661	0	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTTGCTGATTTCTGGT	7070	False	NA	7	True	AATACA	-18	NA	122498796	122505594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_63318_206	chr6	+	821	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	10	2	10	-2	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCGACTCTTTGTAATT	690	False	NA	22	True	AATAAA	-12	NA	122603378	122607229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
Isoform_63320_5	chr6	+	916	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	-85	2	-85	-2	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCGACTCTTTGTAATT	595	False	NA	22	True	AATAAA	-12	NA	122603283	122607229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
Isoform_63323_533	chr6	+	2185	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	26	0	26	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684552	122691592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
Isoform_63324_762	chr6	+	2063	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	148	0	148	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684674	122691592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
Isoform_63333_506	chr6	+	2387	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	83	6	8	-6	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTATTGGTTTTTCAT	871	False	NA	3	True	ATTAAA	-9	NA	122851515	122865894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
Isoform_63337_8	chr6	+	1724	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	7	1279	7	-1279	multi-exon	TRUE	canonical	2	10	junction_3	3.13687742827162	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAACTAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124470078	124486323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
Isoform_63339_515	chr6	+	1900	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	133	248	-12	153	multi-exon	FALSE	canonical	3	738	junction_2	58.4776785524946	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640122	124681133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_6334_17	chr11	-	3801	5	FSM	ENSMUSG00000069793.13	ENSMUST00000138797.2	2128	5	0	-1673	0	101	multi-exon	FALSE	canonical	3	11	junction_4	14.1133801762724	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATGGAAATAGAAACA	8620	False	NA	NA	False	NA	NA	NA	82881963	82871136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82881767
Isoform_63340_171	chr6	+	2169	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	101	11	-44	-11	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAACAACTATAC	NA	False	NA	NA	False	AATAAA	-14	NA	124640090	124681370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
Isoform_63344_3650	chr6	+	1323	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	3650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTCTGAGTGT	NA	False	NA	20	True	AATAAA	-21	NA	124689283	124693909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
Isoform_63345_72	chr6	+	1404	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-96	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTCTGAGTGT	NA	False	NA	20	True	AATAAA	-21	NA	124689202	124693909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
Isoform_63353_5	chr6	+	1167	3	FSM	ENSMUSG00000038451.14	ENSMUST00000143040.8	882	3	-3	-282	-3	-1	multi-exon	FALSE	canonical	3	7	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTTCATTATTGTTTT	NA	False	NA	18	True	AGTAAA	-21	NA	124785844	124787581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124785919_124786189_124786933_124787231
Isoform_63354_3	chr6	+	1192	3	NIC	ENSMUSG00000038451.14	novel	1219	3	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTTTCATTATTGTT	NA	False	NA	16	True	AGTAAA	-19	NA	124785844	124787579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_124785946_124786189_124786933_124787231
Isoform_63355_18	chr6	+	1216	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	0	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTTTCATTATTGTT	NA	False	NA	16	True	AGTAAA	-19	NA	124785868	124787579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124785994_124786189_124786933_124787231
Isoform_63356_20	chr6	+	1085	7	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-4	-233	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	434.945207277116	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTACACCGGGTCTTG	1358	False	NA	50	True	ATTAAA	-37	NA	124807193	124810262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63357_17	chr6	+	1153	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	8	-256	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1352	False	NA	27	True	ATTAAA	-14	NA	124807187	124810239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63359_536	chr6	+	1008	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	543	425	-4	-256	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1358	False	NA	27	True	ATTAAA	-14	NA	124807193	124810239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63360_162	chr6	+	1037	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	514	425	-15	-256	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1329	False	NA	27	True	ATTAAA	-14	NA	124807164	124810239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63361_19	chr6	+	1431	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	543	2	-4	-2	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTGTCTTGTCTTGC	1358	False	NA	37	True	NA	NA	NA	124807193	124810662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63363_9	chr6	+	1476	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	500	0	-29	0	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	1315	False	NA	39	True	NA	NA	NA	124807150	124810664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
Isoform_63365_27	chr6	+	1657	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	4	256	4	-256	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGCTTTAAGAAGTTA	1366	False	NA	27	True	ATTAAA	-14	NA	124807201	124810239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
Isoform_6337_5	chr11	-	3870	5	FSM	ENSMUSG00000035208.17	ENSMUST00000130822.3	2128	5	18	-1760	18	31	multi-exon	FALSE	canonical	0	0	junction_1	6.75925291729789	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGGTGGGTAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	82910916	82892952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_82894716_82894882_82895607_82904190_82904326_82907478_82908549_82910738
Isoform_63370_103	chr6	+	1692	8	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	6	0	-5	intron_retention	FALSE	canonical	3	3577	junction_4	212.973122765311	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAAGATTCTGGCT	NA	False	NA	21	True	AATAAA	-11	NA	124908348	124913102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
Isoform_63371_50	chr6	+	1536	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	-90	5	0	-5	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAAGATTCTGGCT	NA	False	NA	21	True	AATAAA	-11	NA	124908348	124913102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
Isoform_63372_1529	chr6	+	1515	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	6	0	-5	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAAGATTCTGGCT	NA	False	NA	21	True	AATAAA	-11	NA	124908348	124913102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
Isoform_63379_4	chr6	+	2100	5	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	383	2	181	-2	3prime_fragment	FALSE	canonical	3	36	junction_1	6.9462219947249	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	NA	False	NA	14	True	AATAAA	-14	NA	124975782	124980057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
Isoform_6338_3	chr11	-	2414	4	NIC	ENSMUSG00000018733.11	novel	2389	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	21.4009345590327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGACTTCTTGAAGTT	2394	False	NA	-8	True	AATAAA	-15	NA	83189800	83185901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_83187267_83188313_83188868_83189141_83189374_83189537
Isoform_63381_14	chr6	+	1618	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	12	-1	0	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7119	False	NA	7	True	AATAAA	-17	NA	125016810	125026228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
Isoform_63382_7	chr6	+	1831	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	-8	2237	-8	-2237	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATGTGTGTGCGGTGAT	7108	False	NA	4	True	AATAAA	-14	NA	125016799	125026225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
Isoform_63384_48	chr6	+	1247	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	251	0	-7	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026902	125031157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
Isoform_63386_3	chr6	+	1569	6	ISM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-41	8053	-29	-2	5prime_fragment	FALSE	canonical	3	11	junction_5	39.188773902739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125026880	125032177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635
Isoform_63387_7	chr6	+	1902	10	FSM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-19	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_9	45.7669890199324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	125026902	125040230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039398_125039483_125039898
Isoform_63388_3	chr6	+	1129	4	NIC	ENSMUSG00000072770.10	novel	1498	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	51.6978400580398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026902	125031157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_125027016_125027396_125027613_125027809_125027905_125030452
Isoform_63389_5	chr6	+	1161	4	ISM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	718	0	440	0	3prime_fragment	FALSE	canonical	3	86	junction_3	13.4742552876052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125027369	125031157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_125027613_125027809_125027905_125028205_125028324_125030452
Isoform_6339_10	chr11	-	2396	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2419	False	NA	-7	True	AATAAA	-16	NA	83189775	83185900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
Isoform_63390_16	chr6	+	2964	2	FSM	ENSMUSG00000107761.2_ENSMUSG00000067714.14	ENSMUST00000088292.7	1393	2	0	-1571	0	14	multi-exon	FALSE	canonical	2	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACACATTCCATTTA	5038	False	NA	NA	False	NA	NA	NA	125044882	125061006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125044940_125058099
Isoform_63398_3	chr6	+	6494	39	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	121.260199616693	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGATCTGGTTCTGTGT	1807	False	NA	11	True	AATAAA	-15	NA	125073142	125107551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078972_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
Isoform_634_6	chr10	-	1291	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-4	151	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGACAGTTGTTTTAT	NA	False	NA	-4	True	TATAAA	-17	NA	5773914	5763060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
Isoform_6340_9	chr11	-	2268	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	28	433	-7	0	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2419	False	NA	-7	True	AATAAA	-16	NA	83189775	83185900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
Isoform_63403_1681	chr6	+	2599	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-4	2	-4	-2	multi-exon	FALSE	canonical	0	0	junction_7	206.283558885983	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5433	False	NA	23	True	AATATA	-15	NA	125108867	125121714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
Isoform_63407_28	chr6	+	2644	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-47	0	-47	0	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5390	False	NA	25	True	AATATA	-17	NA	125108824	125121716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
Isoform_6341_4	chr11	-	2227	4	NIC	ENSMUSG00000018733.11	novel	2729	4	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	26.8700576850888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCTTGAAGTTTTTC	2391	False	NA	-4	True	AATAAA	-19	NA	83189803	83185897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_83187267_83188313_83188868_83189141_83189380_83189737
Isoform_63417_33	chr6	+	2857	9	NIC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.7616368464237	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8208	False	NA	6	True	AATAAA	-13	NA	125122184	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
Isoform_63419_17	chr6	+	2832	9	FSM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	3	5	3	1	multi-exon	FALSE	canonical	3	11	junction_6	15.028618532653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
Isoform_63420_5	chr6	+	3079	8	FSM	ENSMUSG00000038271.18	ENSMUST00000141230.8	3056	8	-22	-1	3	1	multi-exon	FALSE	canonical	3	22	junction_1	12.7711409363583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
Isoform_63421_4	chr6	+	2919	10	NNC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	16.5058912041866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8230	False	NA	6	True	AATAAA	-13	NA	125122206	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
Isoform_63422_3	chr6	+	2936	10	NNC	ENSMUSG00000038271.18	novel	2833	10	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.7374542691621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8210	False	NA	6	True	AATAAA	-13	NA	125122186	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
Isoform_63423_8	chr6	+	3185	9	NNC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	-19	1	intron_retention	FALSE	canonical	2	8	junction_1	17.2898091371767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTGAGCCTGCTT	8208	False	NA	6	True	AATAAA	-13	NA	125122184	125138740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
Isoform_63424_9	chr6	+	486	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	364	5	0	-5	multi-exon	FALSE	canonical	3	70	junction_1	333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	44	True	GGGGCT	-43	NA	125169127	125170516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125169172_125169478_125169590_125170185
Isoform_63425_9	chr6	+	835	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	14	6	14	-6	multi-exon	FALSE	canonical	3	70	junction_1	333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACGTCTGCCTCGTT	NA	False	NA	43	True	GGGGCT	-42	NA	125168777	125170515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125169172_125169478_125169590_125170185
Isoform_63426_157	chr6	+	665	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	46	2716	-6	-5	multi-exon	FALSE	canonical	3	716	junction_1	10	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	44	True	GGGGCT	-43	NA	125169173	125170516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_63427_30	chr6	+	680	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	0	2747	0	-36	multi-exon	FALSE	canonical	3	716	junction_1	10	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGCCCAGTGCTACAT	NA	False	NA	13	True	AATAAA	-23	NA	125169127	125170485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_63429_24	chr6	+	701	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	10	2716	10	-5	multi-exon	FALSE	canonical	3	716	junction_1	10	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACGTCTGCCTCGTTC	NA	False	NA	44	True	GGGGCT	-43	NA	125169137	125170516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125169397_125169478_125169590_125170185
Isoform_6343_17	chr11	-	1446	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	0	1	0	-1	multi-exon	FALSE	canonical	3	59	junction_2	13.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTTATTAATCATTTT	NA	False	NA	-15	True	AATAAA	-14	NA	83959183	83938867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83940137_83941657_83941747_83959095
Isoform_63433_105	chr6	+	2141	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	7	8	7	-8	multi-exon	FALSE	canonical	3	24	junction_1	4.54062594260057	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCGCTGACCCTGG	3783	False	NA	7	True	AATACA	-12	NA	125326692	125339439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_63434_3	chr6	+	1445	5	FSM	ENSMUSG00000030341.18	ENSMUST00000134803.2	764	5	-72	-609	-72	-1	multi-exon	FALSE	canonical	3	27	junction_3	5.67340285895511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACCCTGGAAAGAGT	NA	False	NA	14	True	AATACA	-19	NA	125337317	125339446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_63435_3	chr6	+	859	4	ISM	ENSMUSG00000001930.18	ENSMUST00000112253.6	2184	10	35584	301	-15003	-4	3prime_fragment	FALSE	canonical	3	17	junction_3	6.84754619472471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCGGGAAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	125565509	125569133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596
Isoform_63436_109	chr6	+	2141	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	11	349	2	4	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCATGTGAAAATGTTT	NA	False	NA	NA	False	AATATA	-14	NA	126916939	126952581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_63437_15	chr6	+	2225	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	11	265	2	88	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTACTCTTCTTCTC	NA	False	NA	NA	False	TTTAAA	-19	NA	126916939	126952665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
Isoform_63439_3	chr6	+	1727	7	FSM	ENSMUSG00000037997.13	ENSMUST00000112193.8	1725	7	-47	45	8	-45	multi-exon	FALSE	canonical	3	34	junction_4	10.0443461155462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTGGTCCTCTGAAA	NA	False	NA	NA	False	AATAAA	-10	NA	127430590	127455973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961
Isoform_6344_3	chr11	-	1518	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	-56	-15	-56	15	multi-exon	FALSE	canonical	3	59	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGTGTGTGAGTGTGC	NA	False	NA	1	True	AATAAA	-30	NA	83959239	83938851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83940137_83941657_83941747_83959095
Isoform_63440_5	chr6	+	3818	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-94	22	9	-1	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430591	127471202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_63441_4	chr6	+	3703	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	15.8513502933488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCCTGTGTGTGCT	NA	False	NA	12	True	ATTAAA	-17	NA	127430586	127471203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
Isoform_63442_7	chr6	+	4411	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-7	-251	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGAGGTGATTTAAT	NA	False	NA	17	True	TATAAA	-30	NA	128339922	128352858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
Isoform_63444_13	chr6	+	4625	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-226	253	-226	-253	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128339703	128352856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
Isoform_63448_29	chr6	+	4385	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	7	260	7	-260	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339936	128352849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
Isoform_63453_3	chr6	+	4308	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	47	-255	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	67.396834742689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGCCTGGAGGTGATT	NA	False	NA	13	True	TATAAA	-26	NA	128339976	128352854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
Isoform_63454_3	chr6	+	4495	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	18	-267	intron_retention	FALSE	canonical	3	39	junction_5	60.3668783357231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTACCTCGTACACAGC	NA	False	NA	1	True	TATAAA	-14	NA	128339947	128352842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496
Isoform_63455_25	chr6	+	4324	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	27	-256	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACAGCCTGGAGGTGAT	NA	False	NA	12	True	TATAAA	-25	NA	128339956	128352853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_63456_10	chr6	+	3320	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-16	877	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGCGAGAGGTGGAGCC	NA	False	NA	8	True	AATAAA	-22	NA	128339913	128351806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_63458_3	chr6	+	4551	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-201	-257	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACACAGCCTGGAGGTGA	NA	False	NA	11	True	TATAAA	-24	NA	128339728	128352852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
Isoform_63459_72	chr6	+	1775	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	30	15	-10	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	19	True	AATAAA	-23	NA	129510152	129519294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
Isoform_6346_376	chr11	-	2147	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	3	1	3	-1	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGGGTGTGTCAGATA	NA	False	NA	-5	True	ATTAAA	-16	NA	84020423	83969746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
Isoform_63460_12	chr6	+	1804	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	1	15	1	-15	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGACTCAGAATTGTG	NA	False	NA	19	True	AATAAA	-23	NA	129510123	129519294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
Isoform_63463_13	chr6	+	2200	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	133	3374	133	-3371	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAATTTTTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	134012795	134243747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_63464_3	chr6	+	2023	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	153	3369	-116	-3369	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTTTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	134012815	134243749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
Isoform_63465_42	chr6	+	2157	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	43	-622	6	1	multi-exon	FALSE	canonical	3	57	junction_3	10	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGCCTGTAACCC	NA	False	NA	14	True	AATAAA	-26	NA	134391433	134415700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
Isoform_63467_3	chr6	+	1346	3	FSM	ENSMUSG00000042992.16	ENSMUST00000203234.2	485	3	-209	-652	85	652	multi-exon	FALSE	canonical	3	52	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134618008	134663916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134618221_134621291_134621436_134662926
Isoform_63468_16	chr6	+	1666	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	80	18	59	-18	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGTGTAGCAGCTAA	NA	False	NA	13	True	ATTAAA	-14	NA	134617982	134688132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
Isoform_63469_24	chr6	+	1645	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	118	1	97	-1	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTGATCTGATTCTAA	NA	False	NA	30	True	ATTAAA	-31	NA	134618020	134688149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
Isoform_6347_20	chr11	-	2404	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	1	-254	1	254	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCCGCTTTCTGTGA	NA	False	NA	-21	True	AATAAA	-18	NA	84020425	83969491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
Isoform_63472_10	chr6	+	3623	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	0	6	0	-6	multi-exon	FALSE	canonical	3	17	junction_3	2.06155281280883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTCAGTTGCCTG	NA	False	NA	2	True	AATAAA	-13	NA	134807116	134835888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
Isoform_63473_4	chr6	+	3085	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	15	1452	15	-1259	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAACAAAAATCCAGC	NA	False	NA	NA	False	NA	NA	NA	134897378	134901024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134898358_134898918
Isoform_63474_5	chr6	+	1178	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	-56	3430	-56	-3237	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTTAATGAGGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	134897307	134899046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134898358_134898918
Isoform_63477_3	chr6	+	2441	3	FSM	ENSMUSG00000003031.15	ENSMUST00000003115.9	2393	3	-47	-1	-47	1	multi-exon	FALSE	canonical	2	2	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGAGTGCAACTGTCCT	NA	False	NA	14	True	AATAAA	-19	NA	134897316	134902477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134898358_134898918_134899047_134901205
Isoform_6348_8	chr11	-	2109	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	142.244346396026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGGGTGTGTCAGATA	NA	False	NA	-5	True	ATTAAA	-16	NA	84020445	83969746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
Isoform_63483_32	chr6	+	404	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	36	5222	-5	1	multi-exon	FALSE	canonical	3	145	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	25	True	NA	NA	NA	134906090	134928539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134906224_134928268
Isoform_63485_4	chr6	+	519	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	-80	5223	-80	0	multi-exon	FALSE	canonical	3	145	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTGTTTCTGGGCTCTG	7885	False	NA	24	True	NA	NA	NA	134905974	134928538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134906224_134928268
Isoform_63486_8	chr6	+	429	2	FSM	ENSMUSG00000098318.8	ENSMUST00000184504.2	544	2	-27	142	-5	1	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	25	True	NA	NA	NA	134906090	134928539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134906249_134928268
Isoform_63488_957	chr6	+	1741	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	19	4	-1	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6593	False	NA	16	True	ATTAAA	-16	NA	134988593	135000735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
Isoform_63493_82	chr6	+	2056	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	23	4	23	-4	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTATTTATTTATTT	NA	False	NA	28	True	AATAAA	-28	NA	135042671	135061703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
Isoform_63495_62	chr6	+	4152	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	69	0	-63	0	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135175043	135213240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
Isoform_63497_60	chr6	+	2638	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	83	0	6	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135340011	135360171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_63498_15	chr6	+	2698	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	23	0	23	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135339951	135360171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_63499_3	chr6	+	2708	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	83	-70	6	70	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTGCCTGCTGGTTTG	NA	False	NA	77	True	AATATA	-28	NA	135340011	135360241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
Isoform_635_26	chr10	-	3428	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	26	-7	26	7	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATGAATTTGTGGTA	NA	False	NA	3	True	AATAAA	-18	NA	7162211	7069055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
Isoform_6350_253	chr11	-	1784	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	29	9	29	-9	multi-exon	FALSE	canonical	3	481	junction_8	26.3136793744665	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404319	84313689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_63501_3	chr6	+	1603	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	0	-30	0	30	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAAAATTTTAAATTAT	NA	False	NA	NA	False	AGTAAA	-16	NA	136304536	136307011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136304647_136305518
Isoform_63503_28	chr6	+	4231	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	43	3785	-1	-1242	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATTCAAACTTCGGGG	7091	False	NA	19	True	AATAAA	-27	NA	136495842	136584075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
Isoform_63505_757	chr6	+	1755	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	842	53	414	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATAATTTTTCTCTTT	NA	False	NA	83	True	AATAAA	-10	NA	137712128	137728088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
Isoform_63508_119	chr6	+	2596	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	1	53	-1	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGCTTGGATTCCTGAAG	NA	False	NA	22	True	AATAAA	-25	NA	137712128	137728929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
Isoform_6351_13	chr11	-	1859	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	-45	8	-45	-8	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGTCACTGTCTTCA	NA	False	NA	-8	True	AATAAA	-36	NA	84404393	84313688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_63512_386	chr6	+	1727	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	0	2	0	-2	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTGTTTATTT	NA	False	NA	18	True	AATACA	-18	NA	137731555	137814890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
Isoform_63516_5	chr6	+	1066	10	ISM	ENSMUSG00000030231.12	ENSMUST00000203517.3	3006	23	-116	42664	-9	-9194	5prime_fragment	FALSE	canonical	3	72	junction_4	12.6588669943343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGAAAAAAGGGCC	NA	False	NA	6	True	NA	NA	NA	140369770	140489561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445
Isoform_63517_6	chr6	+	3329	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	-49	2652	-49	3	multi-exon	FALSE	canonical	3	55	junction_1	98.0522559554811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATTGTAACAATTCAAT	NA	False	NA	NA	False	AATAAA	-23	NA	140568339	140598555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_63518_3	chr6	+	2625	9	NNC	ENSMUSG00000030232.19	novel	5932	8	NA	NA	120	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130.518197964882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140568508	140598552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_140568785_140579414_140579624_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
Isoform_63521_56	chr6	+	3688	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	37	2	37	-2	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTTCAAATTGTAACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	140569261	140598550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_63522_5	chr6	+	3624	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-13	116	-13	-116	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTACTAGTATTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	140569211	140598436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_63525_4	chr6	+	4668	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	27	-968	27	-624	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTCACATGTGTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	140569251	140599520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
Isoform_63526_44	chr6	+	3165	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTTCAAATTGTAACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	140569251	140598550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
Isoform_63529_6	chr6	+	4148	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	12	-627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATTTTCACATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	140569236	140599517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_140570071_140579414_140579624_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
Isoform_6353_4	chr11	-	1646	12	NIC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	29	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	148.688370106605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404319	84313689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_63534_18	chr6	+	1705	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	23	1103	-1	103	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTTTAATGACTCATTT	NA	False	NA	13	True	AATAAA	-18	NA	142291402	142307880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
Isoform_63538_80	chr6	+	2804	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	14	0	14	0	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332960	142349584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
Isoform_6354_4	chr11	-	1999	9	FSM	ENSMUSG00000018697.15	ENSMUST00000148434.2	1992	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	481	junction_4	26.8348537353942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84404355	84357730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
Isoform_63542_5	chr6	+	2548	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-33	-2148	-1	0	multi-exon	FALSE	canonical	3	32	junction_1	306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332945	142349584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_142333096_142341913_142341996_142347268
Isoform_63545_13	chr6	+	3525	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	59	1057	-9	-7	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTATTTATTGTGTGAG	NA	False	NA	2	True	ATTAAA	-13	NA	142702470	142720383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
Isoform_63548_90	chr6	+	1697	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	62	1	-6	-1	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGTACTGTAAGACC	NA	False	NA	32	True	AATAAA	-21	NA	142702473	142721439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
Isoform_63549_33	chr6	+	1720	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	34	6	34	-6	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTTTCTGTACTGTA	NA	False	NA	27	True	AATAAA	-16	NA	142702445	142721434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
Isoform_6355_3	chr11	-	2579	4	ISM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	37	4	37	-4	intron_retention	FALSE	canonical	3	90	junction_1	8.65383665716478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATCTCCCTGGAGTTGAT	NA	False	NA	-8	True	AATAAA	-19	NA	84710304	84703890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425
Isoform_63552_6	chr6	+	2367	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	-56	8	-56	-2	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCAGTGTGGCTGGAA	NA	False	NA	9	True	AATAAA	-14	NA	145067408	145120652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_63553_4	chr6	+	2830	19	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	7	junction_2	14.613540144522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGCTGGAACGCCTG	NA	False	NA	15	True	AATAAA	-20	NA	145067430	145120658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_145067833_145083185_145083813_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_63554_12	chr6	+	1764	17	FSM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	-3	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.1684894660652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145091199	145120654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_63555_3	chr6	+	1359	9	ISM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	15323	1	3053	-1	3prime_fragment	FALSE	canonical	3	39	junction_1	6.7256505261573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTGTGGCTGGAAC	NA	False	NA	10	True	AATAAA	-15	NA	145106525	145120653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
Isoform_63556_4	chr6	+	1350	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	-19	5	-3	-5	multi-exon	TRUE	canonical	3	42	junction_1	139.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTCTTAAAGGAGTCT	NA	False	NA	9	True	NA	NA	NA	145156892	145162260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145156971_145160909_145160998_145161076
Isoform_63559_16	chr6	+	1352	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	20	2	1	-2	multi-exon	FALSE	canonical	3	230	junction_1	45.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTAAAGGAGTCTTTA	NA	False	NA	12	True	NA	NA	NA	145156901	145162263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145156979_145160909_145160998_145161076
Isoform_6356_6	chr11	-	1857	4	ISM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	761	2	-20	-2	3prime_fragment	FALSE	canonical	3	90	junction_1	8.65383665716478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	False	NA	-6	True	AATAAA	-21	NA	84709580	84703888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425
Isoform_63560_5	chr6	+	881	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	30	-12	30	12	multi-exon	FALSE	canonical	3	46	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTGTTTTGTTGAC	NA	False	NA	18	True	NA	NA	NA	145196284	145197587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145196516_145196937
Isoform_63561_722	chr6	+	1513	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	260	2	260	-2	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	14	True	AATAAA	-34	NA	145561742	145567203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
Isoform_63563_20	chr6	+	1556	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	211	8	211	-8	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGACATTTGCTTCCC	NA	False	NA	8	True	AATAAA	-28	NA	145561693	145567197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
Isoform_63565_60	chr6	+	908	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	7	3	7	-3	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGGTGTGCTTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	146479425	146494360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
Isoform_63566_62	chr6	+	2819	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	60	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479416	146500695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
Isoform_6357_258	chr11	-	2490	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-14	1	-14	-1	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCTGGAGTTGATTTG	NA	False	NA	-5	True	AATAAA	-22	NA	84710355	84703887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
Isoform_63570_15	chr6	+	2703	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	62	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479418	146500695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
Isoform_63573_103	chr6	+	782	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	32	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544076	146552100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
Isoform_63575_49	chr6	+	2323	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-31	2258	-31	-2	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGATCAGTCAATGG	NA	False	NA	9	True	ATTAAA	-19	NA	146626461	146678052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_63576_4	chr6	+	4337	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-25	238	-25	-238	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTTTAGATTTTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	146626467	146680072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
Isoform_63578_7	chr6	+	2137	9	ISM	ENSMUSG00000040187.16	ENSMUST00000129788.8	1664	15	14887	-881	-14	-2	3prime_fragment	FALSE	canonical	0	0	junction_7	1.49478259288767	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTATTTGCCTTTCTG	NA	False	NA	NA	False	TTTAAA	-3	NA	146721914	146735025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_146722167_146723407_146723649_146724086_146724194_146724591_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
Isoform_63579_3	chr6	+	2118	9	ISM	ENSMUSG00000040187.16	ENSMUST00000111638.8	1710	15	14872	-877	-29	1	3prime_fragment	FALSE	canonical	0	0	junction_7	1.53602571593056	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCTATTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	146721899	146735021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_146722167_146723407_146723649_146724086_146724194_146724621_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
Isoform_63581_11	chr6	+	5013	28	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCATTGTTT	7539	False	NA	14	True	AATAAA	-18	NA	146789984	146933524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_63583_11	chr6	+	4888	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	1	35	junction_15	73.2858432087318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7530	False	NA	11	True	AATAAA	-15	NA	146789975	146933521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_63588_18	chr6	+	4843	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	7	1	7	1	multi-exon	FALSE	canonical	1	79	junction_5	45.7139938177494	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTATTTGTCATTGT	7546	False	NA	12	True	AATAAA	-16	NA	146789991	146933522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
Isoform_6359_3	chr11	-	1360	7	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-2	130	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	15.7585955380971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTTCAGAAGTATCT	NA	False	NA	NA	False	ATTAAA	-19	NA	84719822	84711551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
Isoform_63590_280	chr6	+	1063	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	8	3091	8	1	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATTGTCTTACGTCAG	NA	False	NA	13	True	TATAAA	-15	NA	146944269	146972398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
Isoform_63592_18	chr6	+	1970	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	113	4184	113	422	multi-exon	FALSE	canonical	3	50	junction_2	10.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGATCTCCTCAGAAGG	NA	False	NA	NA	False	ATTAAA	-21	NA	146992989	147010092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146993866_147003063_147003258_147009192
Isoform_63594_3	chr6	+	3271	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	115	2881	115	-698	multi-exon	FALSE	canonical	3	50	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAATCTCTGCTAGTCT	NA	False	NA	NA	False	TATAAA	-20	NA	146992991	147011395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146993866_147003063_147003258_147009192
Isoform_63596_16	chr6	+	2302	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	-14	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTTGATTGTCAT	NA	False	NA	10	True	AATAAA	-11	NA	147377354	147534103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_63597_3	chr6	+	2511	14	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	30.2488691167164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGATTGTCATGTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	147377403	147534109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147434773_147434862_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_63598_147	chr6	+	2419	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	33	7	33	-7	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTTGATTGTCAT	NA	False	NA	10	True	AATAAA	-11	NA	147377401	147534103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_63599_4	chr6	+	2359	12	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	20	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	24.9014586847457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGATTGTCATGTTTT	NA	False	NA	15	True	AATAAA	-16	NA	147377388	147534108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
Isoform_6360_12	chr11	-	1457	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	-73	-130	-43	130	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTTCAGAAGTATCT	NA	False	NA	NA	False	ATTAAA	-19	NA	84719863	84711551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
Isoform_63601_10	chr6	+	1331	3	FSM	ENSMUSG00000039958.18	ENSMUST00000111548.8	1398	3	62	5	4	-5	multi-exon	FALSE	canonical	3	12	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAACTTGGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	149043075	149046625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_149043203_149044103_149044214_149045531
Isoform_63602_7	chr6	+	1581	5	FSM	ENSMUSG00000039958.18	ENSMUST00000134306.8	848	5	32	-765	22	-3	multi-exon	FALSE	canonical	3	12	junction_2	6.86931583201704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAATAAGGAACTCAA	NA	False	NA	NA	False	NA	NA	NA	149043093	149052661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_149043203_149044103_149044214_149045531_149045941_149048655_149048787_149051839
Isoform_63603_4	chr6	+	1500	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	57	5	-4	0	multi-exon	FALSE	canonical	1	2	junction_1	11.6141675934562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAGGAACTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	149043067	149052664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
Isoform_63606_3	chr6	+	1965	5	FSM	ENSMUSG00000032712.17	ENSMUST00000130664.8	1957	5	-7	-1	-7	1	multi-exon	TRUE	canonical	3	64	junction_3	55.879334283794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAATTAAAATTAATAA	NA	False	NA	NA	False	ATTAAA	-40	NA	149210904	149228170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902
Isoform_63608_3	chr6	+	1876	4	FSM	ENSMUSG00000032712.17	ENSMUST00000190785.7	4152	4	-29	2305	-1	1	multi-exon	FALSE	canonical	3	39	junction_3	71.6286720990042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAATTAAAATTAATAA	NA	False	NA	NA	False	ATTAAA	-40	NA	149210924	149228170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902
Isoform_63612_3	chr6	+	1757	5	ISM	ENSMUSG00000003452.16	ENSMUST00000003544.14	2928	10	-446	43630	-1	-6212	5prime_fragment	FALSE	canonical	3	14	junction_4	5.80409338312195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAATATAATAAATC	149	False	NA	NA	False	NA	NA	NA	149310480	149414599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293
Isoform_63613_652	chr6	+	2202	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	933	0	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4721	False	NA	NA	False	AATAAA	-16	NA	117884742	117902582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
Isoform_63618_141	chr6	+	2204	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	967	-1	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGGCACAGCTTATGT	4755	False	NA	NA	False	AATAAA	-13	NA	117884776	117902579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
Isoform_6362_7	chr11	-	2698	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	598	219	62	-219	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGTGGTGTACATGT	NA	False	NA	-4	True	AATAAA	-22	NA	84760966	84723405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_63621_11	chr6	+	569	3	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	85	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125409775_125409999_125410201_125435571
Isoform_63622_9	chr6	+	676	4	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	60.7417118260224	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435571
Isoform_63625_6	chr6	+	930	4	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	70.1046836286041	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435317
Isoform_63627_4	chr6	+	690	4	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	73.0585761944178	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125435571
Isoform_63628_10	chr6	+	797	5	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_3	59.9437236080643	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAACTCTGGTGATT	NA	False	NA	-2	True	AATAAA	-12	NA	125409631	125435796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125434610_125434718_125435571
Isoform_63629_9	chr6	+	3195	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-63	2	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	54.4319696453353	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCATATTCTTTGC	110	False	NA	NA	False	AATAAA	-24	NA	49372474	49446437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_6363_4	chr11	-	2358	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	542	615	6	-4	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATGACTACTGCGCCT	NA	False	NA	NA	False	AATAAA	-30	NA	84761022	84723801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_63630_12	chr6	+	2645	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-54	-4	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	55.816430581886	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAAATCATTCATAT	119	False	NA	NA	False	AATAAA	-17	NA	49372483	49446430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_63631_4	chr6	+	2537	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	64.4351612087686	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	117	False	NA	NA	False	AATAAA	-23	NA	49372481	49446436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_63632_9	chr6	+	2386	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-65	1	at_least_one_novel_splicesite	TRUE	canonical	2	62	junction_6	56.8725064900417	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	108	False	NA	NA	False	AATAAA	-23	NA	49372472	49446436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
Isoform_63633_10	chr6	+	1493	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-215	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2749	False	NA	24	True	AATAAA	-10	NA	87890701	87913591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_63634_24	chr6	+	1455	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-177	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2787	False	NA	24	True	AATAAA	-10	NA	87890739	87913591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
Isoform_63636_13	chr6	+	1517	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8365	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	4	True	AATATA	-15	NA	121179289	121203057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_63637_13	chr6	+	1476	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8324	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	4	True	AATATA	-15	NA	121179330	121203057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_63638_3	chr6	+	1624	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8474	-758	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGCCTCTTTCTTTGT	NA	False	NA	2	True	AATATA	-13	NA	121179180	121203055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
Isoform_63639_7	chr6	+	1180	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	366	-4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCTCACGGGCAT	8097	False	NA	NA	False	TTTAAA	-6	NA	122499823	122506245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_6364_3	chr11	-	2691	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	61	-224	61	-221	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84760967	84723407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_63640_12	chr6	+	542	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	350	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	8081	False	NA	4	True	AATACA	-15	NA	122499807	122505591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
Isoform_63641_11	chr6	+	1311	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	935.045821069748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTTGCTTCCTCTCA	NA	False	NA	21	True	AATAAA	-27	NA	86986214	87005439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_86986492_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
Isoform_63645_3	chr6	+	764	2	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGCCTTTACATTTT	NA	False	NA	0	True	NA	NA	NA	117856966	117861552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_117857120_117860941
Isoform_63646_3	chr6	+	3068	2	NNC	ENSMUSG00000073018.7	novel	2874	2	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTGTTGTGATGTGA	NA	False	NA	9	True	NA	NA	NA	71270786	71279862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_71271077_71277084
Isoform_63647_3	chr6	+	2758	11	NNC	ENSMUSG00000060477.15	novel	1887	10	NA	NA	262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.41350119714026	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGCTGTCTTATAATTT	8487	False	NA	9	True	AATAAA	-14	NA	113647000	113671970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_113647082_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
Isoform_63648_5	chr6	+	1671	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7340	-3775	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAATACATCTAATGGT	NA	False	NA	5	True	AATAAA	-7	NA	54801772	54866710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
Isoform_63650_5	chr6	+	2651	21	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-8151	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	48.9645535055718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	NA	False	NA	8	True	AATAAA	-18	NA	90536536	90576146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_90536619_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
Isoform_63653_3	chr6	+	2050	11	NNC	ENSMUSG00000030341.18	novel	2156	10	NA	NA	-720	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.91766101457395	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCGCTGACCCTGG	2695	False	NA	7	True	AATACA	-12	NA	125325604	125339439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr6_+_125325673_125326851_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
Isoform_63655_430	chr6	+	872	1	FSM	ENSMUSG00000081669.2	ENSMUST00000119728.2	528	1	-7	-337	-7	337	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-26	NA	85053166	85054038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85053200_85054000
Isoform_63665_32	chr6	+	1491	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	-97	-914	-97	914	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	85820864	85822355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_85820900_85822400
Isoform_63668_4	chr6	-	2769	1	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	16627	4	5843	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGTGTACTATCTTG	NA	False	NA	-2	True	NA	NA	NA	85922022	85919253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_85919300_85922000
Isoform_63674_3	chr6	+	902	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203206.2	935	1	34	-1	-13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCGACTAGTGGTTGACA	9731	False	NA	NA	False	ATTAAA	-16	NA	86381250	86382152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_86381200_86382200
Isoform_63675_8	chr6	+	822	1	Genic_Genomic	ENSMUSG00000046679.17	novel	NA	NA	NA	NA	-18	7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGGTCTCAAATTACT	1753	False	NA	NA	False	ATTAAA	-8	NA	86415655	86416477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_+_86415700_86416500
Isoform_63679_455	chr6	-	1676	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	148	6	148	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTTCGTATTTGAAA	NA	False	NA	30	True	ATTAAA	-16	NA	86503155	86501479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86501500_86503200
Isoform_63681_38	chr6	-	1722	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	102	6	102	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTTCGTATTTGAAA	NA	False	NA	30	True	ATTAAA	-16	NA	86503201	86501479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86501500_86503200
Isoform_63689_4	chr6	+	1659	1	NIC	ENSMUSG00000097048.8	novel	361	4	NA	NA	-158	-22732	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86503633	86505292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_86503600_86505300
Isoform_63691_7	chr6	-	1018	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	9	15	9	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTTTGAGTATAGGT	NA	False	NA	NA	False	AATACA	-9	NA	86826413	86825395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_86825400_86826400
Isoform_63696_5	chr6	+	2823	1	FSM	ENSMUSG00000029992.15	ENSMUST00000204872.2	2809	1	-19	5	-15	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	9930	False	NA	NA	False	NA	NA	NA	87019812	87022635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_87019800_87022600
Isoform_63703_41	chr6	-	3227	1	NIC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	11	-2292	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	87828030	87824803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_87824800_87828000
Isoform_63704_6	chr6	-	1126	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	91	0	91	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	7000	False	NA	-2	True	AATAAA	-16	NA	87958528	87957402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87957400_87958500
Isoform_63705_4	chr6	-	1214	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATTGTCGTTGTCTTG	6909	False	NA	-5	True	AATAAA	-13	NA	87958619	87957405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_87957400_87958600
Isoform_63706_7	chr6	-	291	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGCATGGCTACCTTCT	7203	False	NA	NA	False	NA	NA	NA	87974434	87974143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_87974100_87974400
Isoform_63708_3	chr6	+	212	1	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	3316	False	NA	NA	False	NA	NA	NA	88051396	88051608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_88051400_88051600
Isoform_63710_5	chr6	-	273	1	Antisense	novelGene_ENSMUSG00000030062.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATAGGCCACTGCCACGG	NA	False	NA	NA	False	AAAAAG	-42	NA	88080930	88080657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_88080700_88080900
Isoform_63711_8	chr6	-	526	1	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-4	-147875	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AAAAAG	-18	NA	88423488	88422962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_88423000_88423500
Isoform_63714_5	chr6	-	3123	1	ISM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	43180	4	1649	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTCGTGGCTCTGAG	NA	False	NA	-6	True	AATAAA	-31	NA	89296422	89293299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_89293300_89296400
Isoform_63717_4	chr6	-	642	1	Antisense	novelGene_ENSMUSG00000029534.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	17840576	17839934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_17839900_17840600
Isoform_63719_21	chr6	-	1838	1	FSM	ENSMUSG00000034203.9	ENSMUST00000205802.2	1854	1	20	-4	20	4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91450411	91448573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91448600_91450400
Isoform_63720_3	chr6	-	1924	1	FSM	ENSMUSG00000034203.9	ENSMUST00000205802.2	1854	1	-66	-4	31	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91450497	91448573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_91448600_91450500
Isoform_63721_3	chr6	-	3971	1	NIC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	-30	-4939	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAG	432	False	NA	NA	False	NA	NA	NA	91492807	91488836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_91488800_91492800
Isoform_63722_4	chr6	+	3050	1	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	71611	353	5480	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	6426	False	NA	NA	False	TTTAAA	-39	NA	91732644	91735694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_91732600_91735700
Isoform_63723_4	chr6	+	2615	1	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	72044	355	5913	-355	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACAAAAAACAAAAA	6859	False	NA	NA	False	TTTAAA	-37	NA	91733077	91735692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_91733100_91735700
Isoform_63725_5	chr6	+	1881	1	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	72780	353	6649	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	7595	False	NA	NA	False	TTTAAA	-39	NA	91733813	91735694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_91733800_91735700
Isoform_63727_8	chr12	-	179	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	65194943	65194764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_65194800_65194900
Isoform_63729_4	chr6	-	892	1	ISM	ENSMUSG00000045095.17	ENSMUST00000089317.12	7209	24	604390	2586	113607	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCATACTTTTTTTGAAA	NA	False	NA	-6	True	ATTAAA	-14	NA	93655913	93655021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_93655000_93655900
Isoform_63730_3	chr8	-	177	1	Intergenic	novelGene_1925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAGAAGAGA	7902	False	NA	NA	False	NA	NA	NA	70131328	70131151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_70131200_70131300
Isoform_63736_13	chr6	-	631	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	85	-197	85	197	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTTCAGAAT	NA	False	NA	-9	True	AATAAA	-16	NA	99855210	99854579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_99854600_99855200
Isoform_63737_5	chr6	-	699	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	15	-195	15	195	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAGAATTTCAGA	NA	False	NA	-11	True	AATAAA	-14	NA	99855280	99854581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_99854600_99855300
Isoform_63739_3	chr6	+	179	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTAATTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	100145917	100146096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_100145900_100146100
Isoform_63740_8	chr6	+	1114	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-35	-641	-35	641	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATAGGTGTATGG	NA	False	NA	NA	False	AGTAAA	-32	NA	100581608	100582722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_100581600_100582700
Isoform_63741_6	chr6	-	329	1	FSM	ENSMUSG00000107806.2	ENSMUST00000205008.2	240	1	-3	-86	-3	86	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACAATAAAGGCAGATGT	NA	False	NA	NA	False	NA	NA	NA	101123443	101123114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_101123100_101123400
Isoform_63742_60	chr6	-	364	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	14	12	14	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTTATTTG	NA	False	NA	-19	True	AATAAA	-15	NA	108117456	108117092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_108117100_108117500
Isoform_63743_3	chr6	+	1476	1	ISM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	40704	0	28906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCTCCTGTGTGTCA	5862	False	NA	NA	False	AATAAA	-18	NA	108800763	108802239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_108800800_108802200
Isoform_63744_28	chr6	-	192	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAACTAATGTACATTG	NA	False	NA	NA	False	NA	NA	NA	111042264	111042072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_111042100_111042300
Isoform_63745_5	chr6	+	2686	1	FSM	ENSMUSG00000083443.2	ENSMUST00000120088.2	1566	1	-20	-1100	-20	1100	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	112540582	112543268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_112540600_112543300
Isoform_63746_4	chr6	-	1059	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	137	-374	-5	-2	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGAATGACTTTTTA	NA	False	NA	-2	True	NA	NA	NA	113054157	113047360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113048397_113054134
Isoform_63747_13	chr14	-	178	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGAAGACC	9971	False	NA	NA	False	NA	NA	NA	21838876	21838698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_-_21838700_21838900
Isoform_63749_4	chr6	-	1245	1	FSM	ENSMUSG00000030286.7	ENSMUST00000203526.2	1216	1	-21	-8	13	8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	113508600	113507355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_113507400_113508600
Isoform_63750_4	chr6	-	203	1	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTAAGTGGTCACTAA	NA	False	NA	NA	False	NA	NA	NA	114842225	114842022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_114842000_114842200
Isoform_63752_3	chr6	-	1372	1	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	115662429	115661057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_115661100_115662400
Isoform_63754_6	chr6	-	202	1	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTTTATTATAAGGT	NA	False	NA	NA	False	NA	NA	NA	115824072	115823870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_115823900_115824100
Isoform_63755_12	chr6	+	862	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-103	-372	-103	372	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	116150594	116151456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_116150600_116151500
Isoform_63772_7	chr6	-	1341	1	Antisense	novelGene_ENSMUSG00000042079.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTGTGCTTCCCTA	5174	False	NA	NA	False	AATATA	-13	NA	117902583	117901242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_117901200_117902600
Isoform_63785_8	chr6	-	1209	1	NIC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-50	-46166	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7504	False	NA	NA	False	NA	NA	NA	119394486	119393277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_119393300_119394500
Isoform_63786_33	chr6	+	2873	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	87	3	87	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCCCCCTTGTATCTG	NA	False	NA	39	True	AATAAA	-40	NA	119456715	119459588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_119456700_119459600
Isoform_63789_21	chr6	+	218	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTATTAAAATAGATTA	NA	False	NA	NA	False	NA	NA	NA	120064239	120064457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_120064200_120064500
Isoform_63790_4	chr6	+	343	1	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120204671	120205014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_120204700_120205000
Isoform_63791_3	chr6	-	174	1	Antisense	novelGene_ENSMUSG00000030180.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120406928	120406754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_120406800_120406900
Isoform_63792_3	chr4	-	177	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGTTTATCT	NA	False	NA	NA	False	NA	NA	NA	41177383	41177206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_41177200_41177400
Isoform_63793_3	chr6	-	211	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGTGAAAACCA	786	False	NA	NA	False	NA	NA	NA	120472727	120472516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_120472500_120472700
Isoform_63794_6	chr6	-	188	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	28786352	28786164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_28786200_28786400
Isoform_63795_11	chr2	+	177	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	102031510	102031687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_102031500_102031700
Isoform_63796_3	chr6	+	175	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	120571188	120571363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_120571200_120571400
Isoform_63797_38	chr6	-	225	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTCCGTCTGCTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	120624726	120624501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_120624500_120624700
Isoform_63800_7	chr6	-	2434	1	FSM	ENSMUSG00000107971.2	ENSMUST00000204946.2	2094	1	-1843	1503	-1843	-1503	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	120893797	120891363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_120891400_120893800
Isoform_63801_3	chr6	-	2454	1	ISM	ENSMUSG00000051586.18	ENSMUST00000098457.9	6670	16	68978	14	1361	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATGAAAAATGTATT	5705	False	NA	NA	False	AATAAA	-28	NA	120911135	120908681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_120908700_120911100
Isoform_63802_3	chr6	-	1800	1	Genic_Genomic	ENSMUSG00000051586.18	novel	NA	NA	NA	NA	-55	-66257	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	121087109	121085309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_121085300_121087100
Isoform_63805_5	chr6	-	247	1	Antisense	novelGene_ENSMUSG00000001424.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCAGC	NA	False	NA	NA	False	NA	NA	NA	28888820	28888573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_28888600_28888800
Isoform_63806_305	chr9	+	543	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	-38	-38	-38	38	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCATTACATTA	NA	False	NA	NA	False	AATAAA	-16	NA	83291674	83292217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83291700_83292200
Isoform_63812_47	chr6	+	445	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGAGGCCAGTAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	122621250	122621695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_122621200_122621700
Isoform_63814_6	chr6	+	195	1	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCATGCTGAATC	5701	False	NA	NA	False	NA	NA	NA	122660306	122660501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_122660300_122660500
Isoform_6383_5	chr11	-	1632	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	1	549	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	227.551215236385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTGTTTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	84761614	84742658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
Isoform_6384_3	chr11	-	1199	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	10	168	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	233.834461864704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATGTGTTAACGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	84761595	84743039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
Isoform_63847_4	chr6	+	2385	1	FSM	ENSMUSG00000107868.2	ENSMUST00000204407.2	2368	1	-17	0	-17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTGGCCCATTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	122788111	122790496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_122788100_122790500
Isoform_63848_4	chr6	-	202	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCTAAAAAAAAAAAAAAAAA	8864	False	NA	NA	False	NA	NA	NA	123253142	123252940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_123252900_123253100
Isoform_63852_5	chr6	+	246	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCAAGAGTGGACCTCA	NA	False	NA	NA	False	AAGAAA	-31	NA	124762438	124762684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_124762400_124762700
Isoform_63858_4	chr6	-	184	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3985	False	NA	NA	False	NA	NA	NA	124916121	124915937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_124915900_124916100
Isoform_6386_3	chr11	-	1253	4	ISM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	115	25026	115	2887	5prime_fragment	FALSE	canonical	3	526	junction_2	34.7019051670398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGTTTTTAAAA	NA	False	NA	67	True	AATAAA	-32	NA	84760913	84748657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_84749365_84751370_84751625_84753063_84753145_84760702
Isoform_63860_17	chr6	+	245	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTCTTTCTT	4336	False	NA	NA	False	NA	NA	NA	124919252	124919497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_124919300_124919500
Isoform_63862_6	chr6	-	188	1	Antisense	novelGene_ENSMUSG00000030330.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	125022568	125022380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_-_125022400_125022600
Isoform_63864_3	chr6	+	510	1	ISM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	34101	0	10315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	3610	False	NA	14	True	AATAAA	-18	NA	125107044	125107554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_125107000_125107600
Isoform_63867_4	chr6	+	3011	1	NIC	ENSMUSG00000030335.7	novel	3427	3	NA	NA	2	-1092	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACATAAA	NA	False	NA	NA	False	NA	NA	NA	125169129	125172140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_125169100_125172100
Isoform_63868_12	chr6	+	168	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGGAG	NA	False	NA	22	True	NA	NA	NA	125389669	125389837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125389700_125389800
Isoform_63869_3	chr6	+	178	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTTATTTG	761	False	NA	NA	False	NA	NA	NA	125433539	125433717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125433500_125433700
Isoform_63872_6	chr6	+	199	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAGGTCATGTGC	3237	False	NA	12	True	NA	NA	NA	125556203	125556402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_125556200_125556400
Isoform_63873_3	chr6	-	2522	1	NIC	ENSMUSG00000030350.9	novel	2724	10	NA	NA	37	-77903	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127746398	127743876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_127743900_127746400
Isoform_63874_9	chr19	+	176	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	41436759	41436935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_41436800_41436900
Isoform_63875_4	chr6	-	294	1	Genic_Genomic	ENSMUSG00000012535.15	novel	NA	NA	NA	NA	15947	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	NA	False	NA	0	True	TTTAAA	-7	NA	29541117	29540823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_29540800_29541100
Isoform_63877_7	chr6	+	182	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTGAATACT	NA	False	NA	NA	False	NA	NA	NA	128184733	128184915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_128184700_128184900
Isoform_63879_7	chr6	-	184	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACTTATTTTTTAAAAA	NA	False	NA	-2	True	AATACA	-6	NA	128365588	128365404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_128365400_128365600
Isoform_63886_6	chr6	-	177	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128461268	128461091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_128461100_128461300
Isoform_63887_149	chr6	+	2249	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-71	-699	-71	699	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128621804	128624053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_128621800_128624100
Isoform_63889_9	chr6	-	173	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	3200	False	NA	NA	False	NA	NA	NA	128823103	128822930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_128822900_128823100
Isoform_63892_5	chr6	-	545	1	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	3612	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGGCTGTGTAACTA	6016	False	NA	-16	True	AATAAA	-14	NA	131342369	131341824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_131341800_131342400
Isoform_63893_8	chr6	+	2458	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	379	5	-2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTGTGTCTCCTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	133082250	133084708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_133082200_133084700
Isoform_63895_8	chr6	-	205	1	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGAGGTCCTGAGTTC	8371	False	NA	NA	False	NA	NA	NA	29661544	29661339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_29661300_29661500
Isoform_63896_4	chr6	-	174	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	134274227	134274053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_134274100_134274200
Isoform_63897_3	chr6	-	1724	1	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAAGCCC	NA	False	NA	NA	False	NA	NA	NA	134326830	134325106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_134325100_134326800
Isoform_63898_4	chr6	+	176	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	134571185	134571361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_134571200_134571400
Isoform_63899_3	chr6	+	220	1	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTCGGGAGG	NA	False	NA	NA	False	NA	NA	NA	134752836	134753056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_134752800_134753100
Isoform_639_6	chr10	-	3705	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	53	57	2	-57	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTGGAGGGATTATAGA	NA	False	NA	NA	False	NA	NA	NA	7423585	7393094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
Isoform_6390_41	chr11	-	975	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	19	4	2	-4	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTATTGTTCCCTTAGT	NA	False	NA	65	True	AATAAA	-12	NA	84807173	84801779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
Isoform_63903_6	chr6	+	3292	1	FSM	ENSMUSG00000030213.13	ENSMUST00000185936.2	5552	1	0	2260	0	-2260	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGCGTTTCT	7092	False	NA	NA	False	NA	NA	NA	136495843	136499135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136495800_136499100
Isoform_63904_17	chr6	+	2108	1	FSM	ENSMUSG00000029772.18	ENSMUST00000201282.2	2146	1	6	32	6	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAATTAAAAAAAAAGAAA	-5	True	NA	NA	False	AATACA	-33	NA	29768502	29770610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_29768500_29770600
Isoform_63906_123	chr6	+	557	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	-6	1280	-6	-999	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTAGAGAGCTGTGTA	NA	False	NA	20	True	AATAAA	-16	NA	136785235	136785792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136785200_136785800
Isoform_63908_399	chr6	+	512	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	39	1280	39	-999	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTAGAGAGCTGTGTA	NA	False	NA	20	True	AATAAA	-16	NA	136785280	136785792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136785300_136785800
Isoform_63909_24	chr6	+	1800	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	25	6	25	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTCTTGACAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	136785266	136787066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_136785300_136787100
Isoform_6391_101	chr11	-	904	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	19	75	2	-75	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGGTGTGGTTCTCTT	NA	False	NA	-6	True	ATTAAA	-15	NA	84807173	84801850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
Isoform_63913_4	chr6	-	822	1	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	141546992	141546170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_141546200_141547000
Isoform_63914_6	chr6	+	179	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTATCTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	141908577	141908756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_141908600_141908800
Isoform_63915_7	chr6	+	3697	1	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-8	-10148	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142702471	142706168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_142702500_142706200
Isoform_63916_3	chr6	+	173	1	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142953969	142954142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_142954000_142954100
Isoform_63917_4	chr6	-	236	1	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATTGTTAGAGTTAC	NA	False	NA	NA	False	AAGAAA	-40	NA	142969069	142968833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_142968800_142969100
Isoform_63919_4	chr6	-	246	1	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTAAGTATTTTTT	NA	False	NA	NA	False	GATAAA	-3	NA	143147921	143147675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_143147700_143147900
Isoform_6392_3	chr11	-	1002	5	FSM	ENSMUSG00000020526.13	ENSMUST00000144552.8	738	5	2	-266	2	-75	multi-exon	FALSE	canonical	2	2	junction_3	166.285146660789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGGTGTGGTTCTCTT	NA	False	NA	-6	True	ATTAAA	-15	NA	84807173	84801850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_84802475_84804047_84804129_84805036_84805210_84806924_84806957_84807081
Isoform_63924_4	chr6	+	778	1	NIC	ENSMUSG00000039629.15	novel	5281	21	NA	NA	0	-27764	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAAAACCA	-5	True	NA	NA	False	TTTAAA	-23	NA	29917011	29917789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_29917000_29917800
Isoform_63925_5	chr6	+	230	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145025715	145025945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_145025700_145025900
Isoform_63927_12	chr6	-	1384	2	Genic_Genomic	ENSMUSG00000040234.17	novel	3241	12	NA	NA	17	-11120	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	146535979	146534564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_146535048_146535078
Isoform_63929_17	chr6	+	1089	1	FSM	ENSMUSG00000030291.13	ENSMUST00000203416.2	1395	1	11	295	-1	-295	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	146544087	146545176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_146544100_146545200
Isoform_6393_8	chr11	-	4211	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	41	2211	41	-2211	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTCACATGGATTAT	NA	False	NA	-15	True	AATAAA	-13	NA	85125915	85080298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
Isoform_63930_4	chr6	+	2925	1	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	50886	7	50569	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTGGTGGGGTGT	NA	False	NA	8	True	AATAAA	-13	NA	146677378	146680303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_146677400_146680300
Isoform_63931_57	chr6	+	177	1	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACCCAG	NA	False	NA	NA	False	NA	NA	NA	30038748	30038925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_30038700_30038900
Isoform_63933_8806	chr6	+	943	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8806	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_148256200_148257100
Isoform_63943_4	chr6	-	201	1	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGGTCTGATCACC	NA	False	NA	NA	False	NA	NA	NA	148660431	148660230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_148660200_148660400
Isoform_63944_3	chr6	+	609	1	Genic_Genomic	ENSMUSG00000085355.3	novel	NA	NA	NA	NA	-41	-1687	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAGGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148846323	148846932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_+_148846300_148846900
Isoform_63945_11	chr6	+	207	1	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148849657	148849864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_148849700_148849900
Isoform_63947_3	chr6	+	638	1	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	25588	10	9558	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTACAGTTTAAGTCT	NA	False	NA	2	True	AATAAA	-14	NA	149236513	149237151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_149236500_149237200
Isoform_63948_3	chr6	+	528	1	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	25708	0	9678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTCTTCATGGTTCT	NA	False	NA	12	True	AATAAA	-24	NA	149236633	149237161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_149236600_149237200
Isoform_63949_5	chr6	-	204	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30233663	30233459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_30233500_30233700
Isoform_63950_4	chr6	-	171	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATGACCCACC	NA	False	NA	NA	False	NA	NA	NA	30344059	30343888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_30343900_30344100
Isoform_63951_25	chr13	+	172	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	99149881	99150053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_99149900_99150100
Isoform_63954_5	chr4	-	202	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTATCAAAAATAAACAGT	NA	False	NA	NA	False	NA	NA	NA	155803379	155803177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_155803200_155803400
Isoform_63956_24	chr6	+	3765	1	FSM	ENSMUSG00000107310.2	ENSMUST00000202891.2	3039	1	-196	-530	-148	530	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	36933588	36937353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_36933600_36937400
Isoform_6396_25	chr11	-	2189	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	225	4049	225	-4049	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTGCATTCTTATTA	NA	False	NA	83	True	AATAAA	-17	NA	85125731	85082136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
Isoform_63960_459	chr6	+	1117	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-110	-542	-110	542	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	37782910	37784027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_37782900_37784000
Isoform_63964_6	chr6	+	176	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37826092	37826268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_37826100_37826300
Isoform_63965_45	chr6	+	178	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	38034695	38034873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_38034700_38034900
Isoform_63966_28	chr6	-	925	1	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	48063	0	48063	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTATGGTTCT	NA	False	NA	0	True	AATAAA	-32	NA	38283145	38282220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_38282200_38283100
Isoform_63967_9	chr6	-	1033	1	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	47941	14	47941	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGCCCTCATTTGGT	NA	False	NA	-14	True	AATAAA	-18	NA	38283267	38282234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_38282200_38283300
Isoform_63968_3	chr6	+	357	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTGTAAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	38336211	38336568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_38336200_38336600
Isoform_63969_5	chr6	-	183	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAT	5814	False	NA	NA	False	NA	NA	NA	38340118	38339935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_38339900_38340100
Isoform_63970_8	chr16	+	176	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15401556	15401732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_15401600_15401700
Isoform_63971_7	chr6	-	339	1	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38505392	38505053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_38505100_38505400
Isoform_63973_4	chr6	-	580	1	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAAAAAACTGGCG	5481	False	NA	NA	False	NA	NA	NA	38528173	38527593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_38527600_38528200
Isoform_63974_16	chr6	+	177	1	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	39345664	39345841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_39345700_39345800
Isoform_63978_9	chr6	+	281	1	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	39414817	39415098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_39414800_39415100
Isoform_63984_3	chr6	+	179	1	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	42315630	42315809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_42315600_42315800
Isoform_63987_18	chr6	-	534	1	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAACAAAATATGTGCA	NA	False	NA	NA	False	NA	NA	NA	47167374	47166840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_47166800_47167400
Isoform_63989_7	chr6	+	212	1	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTAGGAGTCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	47387424	47387636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_47387400_47387600
Isoform_6399_7	chr11	-	4453	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	20	2458	-7	-2458	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAATGTTTAAA	NA	False	NA	NA	False	AATGAA	-16	NA	86091999	85951421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
Isoform_63990_3	chr6	-	3554	1	Genic_Genomic	ENSMUSG00000052241.4	novel	NA	NA	NA	NA	-726	2283	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCATGTTCCTTCTGTCC	NA	False	NA	NA	False	AATAAA	-26	NA	47431980	47428426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_47428400_47432000
Isoform_63991_5	chr6	-	2677	1	Genic_Genomic	ENSMUSG00000052241.4	novel	NA	NA	NA	NA	-745	1387	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGATTCGCCCTGCCTC	NA	False	NA	NA	False	AATACA	-25	NA	47431999	47429322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_47429300_47432000
Isoform_63995_9	chr6	-	1878	1	Genic_Genomic	ENSMUSG00000029687.17	novel	NA	NA	NA	NA	-3	-37154	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AATATA	-8	NA	47571995	47570117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_47570100_47572000
Isoform_63996_3	chr6	+	2862	1	Antisense	novelGene_ENSMUSG00000029687.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAATAAAATATAGAAG	NA	False	NA	NA	False	NA	NA	NA	47572082	47574944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_+_47572100_47574900
Isoform_63999_3	chr6	-	173	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47889334	47889161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_47889200_47889300
Isoform_64_4	ERCC-00077	+	256	1	FSM	ERCC-00077A	DQ516742	258	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	2	258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00077_+_0_300
Isoform_64000_3	chr6	-	180	1	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAATGCAT	NA	False	NA	NA	False	NA	NA	NA	47890749	47890569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_47890600_47890700
Isoform_64001_8	chr6	+	2524	1	NIC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	132	-4015	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	47897541	47900065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_47897500_47900100
Isoform_64002_13	chr6	-	2248	1	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	21950	1	2717	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTTCATGGATTCCA	7370	False	NA	1	True	AATAAA	-16	NA	48041577	48039329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_-_48039300_48041600
Isoform_64003_3	chr6	+	2819	1	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAGATAACAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	48042877	48045696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_+_48042900_48045700
Isoform_64004_3	chr6	+	221	1	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATATTGTTGTTCTGG	NA	False	NA	NA	False	AAAAAG	-15	NA	48056711	48056932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_48056700_48056900
Isoform_64005_259	chr6	-	1612	1	FSM	ENSMUSG00000096403.3	ENSMUST00000178598.3	843	1	-55	-714	-55	714	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-4	True	NA	NA	False	AATAAA	-19	NA	7983438	7981826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_7981800_7983400
Isoform_64007_3	chr6	+	499	1	ISM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	22605	856	4855	-856	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACCGTAAGTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	48395124	48395623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_48395100_48395600
Isoform_64008_4	chr6	-	632	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	48499957	48499325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_48499300_48500000
Isoform_64009_10	chr5	-	216	1	FSM	ENSMUSG00000094664.2	ENSMUST00000148282.2	333	1	-61	178	-61	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAAAACAATACAGTGA	4036	False	NA	NA	False	NA	NA	NA	123393937	123393721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_-_123393700_123393900
Isoform_64010_2274	chr6	+	428	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-60	-35	-60	35	mono-exon	FALSE	NA	NA	NA	NA	NA	2274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	48500391	48500819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_48500400_48500800
Isoform_64011_13	chr6	-	1168	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-12	-619	-12	619	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAAATTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	48502036	48500868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48500900_48502000
Isoform_64012_21	chr6	-	844	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-12	-295	-12	295	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGCATATTTTTTTAG	NA	False	NA	NA	False	AATAAA	-25	NA	48502036	48501192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48501200_48502000
Isoform_64013_40	chr6	-	760	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-40	-183	-40	183	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTTATGTTTTATATA	NA	False	NA	NA	False	AATAAA	-19	NA	48502064	48501304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_48501300_48502100
Isoform_64015_4	chr6	+	175	1	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCCA	NA	False	NA	NA	False	NA	NA	NA	49135000	49135175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_49135000_49135200
Isoform_64016_6	chr6	-	2986	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	-21	823	-18	-823	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAAAAAAAAAGAGGA	4572	False	NA	2	True	NA	NA	NA	49240985	49237999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_49238000_49241000
Isoform_64021_6	chr6	+	176	1	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATCTTCA	8142	False	NA	NA	False	NA	NA	NA	49327470	49327646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_49327500_49327600
Isoform_64022_3	chr6	-	901	1	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	1154	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCAAATTACTTGGTGT	NA	False	NA	-30	True	AATAAA	-8	NA	51439010	51438109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_51438100_51439000
Isoform_64023_33	chr6	-	2507	1	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	0	-1521	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGTGTAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	51446825	51444318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_51444300_51446800
Isoform_64025_11	chr6	+	3848	1	NIC	ENSMUSG00000029836.16	novel	1080	6	NA	NA	-8	-739	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACCAAAAGAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	51447634	51451482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_51447600_51451500
Isoform_64027_13	chr6	+	740	1	ISM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	12435	0	5507	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51459944	51460684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_51459900_51460700
Isoform_64028_5	chr6	+	2056	1	Genic_Genomic	ENSMUSG00000085412.8	novel	NA	NA	NA	NA	-6	-7190	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAAAAAAATT	772	False	NA	NA	False	NA	NA	NA	52079922	52081978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_+_52079900_52082000
Isoform_64029_4	chr6	-	305	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	-52	-40	-52	40	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	52323979	52323674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_52323700_52324000
Isoform_64030_6	chr6	+	172	1	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52348645	52348817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_52348600_52348800
Isoform_64032_9	chr13	+	186	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAAAGAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	42137059	42137245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_+_42137100_42137200
Isoform_64033_6	chr6	+	205	1	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGGTATTTATTGTTG	NA	False	NA	NA	False	NA	NA	NA	54021759	54021964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_54021800_54022000
Isoform_64034_30	chr6	+	178	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	54647458	54647636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_54647500_54647600
Isoform_64035_4	chr6	+	177	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAGAAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	10100453	10100630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_10100500_10100600
Isoform_64036_3	chr6	+	2682	1	Antisense	novelGene_ENSMUSG00000038058.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGCTGAAGGAACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	54920614	54923296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_+_54920600_54923300
Isoform_64038_5	chr6	+	178	1	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAATTTATTATTA	NA	False	NA	NA	False	NA	NA	NA	11286352	11286530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_11286400_11286500
Isoform_64039_4	chr6	+	1396	1	FSM	ENSMUSG00000029787.11	ENSMUST00000205188.2	1414	1	19	-1	-9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTGCTG	NA	False	NA	NA	False	AGTAAA	-27	NA	56691902	56693298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_56691900_56693300
Isoform_64041_4	chr6	-	2228	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCTTTTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	56814345	56812117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_56812100_56814300
Isoform_64042_3	chr6	-	182	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGACTTAAAAAGTAT	NA	False	NA	-16	True	NA	NA	NA	57513491	57513309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_57513300_57513500
Isoform_64043_55	chr6	+	483	1	FSM	ENSMUSG00000071419.8	ENSMUST00000121788.2	438	1	-12	-33	-12	33	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGGGGGGGGAAGAAG	NA	False	NA	13	True	AATAAA	-20	NA	57994478	57994961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_57994500_57995000
Isoform_64047_29	chr6	+	218	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAAGTTTTTTT	NA	False	NA	65	True	NA	NA	NA	64977843	64978061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_64977800_64978100
Isoform_64048_5	chr6	+	181	1	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64981874	64982055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_64981900_64982100
Isoform_64050_3	chr6	+	1145	1	FSM	ENSMUSG00000029913.15	ENSMUST00000205168.2	4168	1	-96	3119	10	-3119	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	65755981	65757126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_65756000_65757100
Isoform_64051_44	chr6	-	473	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	-3	-47	-3	47	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCTACAG	NA	False	NA	-13	True	ATTAAA	-14	NA	66852730	66852257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_66852300_66852700
Isoform_64055_5	chr6	+	1954	1	NIC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	10	-119207	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	66873390	66875344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_66873400_66875300
Isoform_64056_7	chr6	-	184	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAGCTCA	NA	False	NA	NA	False	NA	NA	NA	67132149	67131965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_67132000_67132100
Isoform_64058_4	chr6	+	426	1	FSM	ENSMUSG00000047905.11	ENSMUST00000120174.2	465	1	134	-95	134	95	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	ATTAAA	-21	NA	67182736	67183162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_67182700_67183200
Isoform_64059_6	chr6	-	196	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	67204751	67204555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_67204600_67204800
Isoform_64064_1025	chr6	+	429	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-33	-42	-33	42	mono-exon	FALSE	NA	NA	NA	NA	NA	1025	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	71101560	71101989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71101600_71102000
Isoform_64066_3	chr6	-	654	1	NIC	ENSMUSG00000054474.16	novel	2077	9	NA	NA	-29	-11957	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-42	NA	71121360	71120706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_71120700_71121400
Isoform_64068_6	chr6	+	3192	1	FSM	ENSMUSG00000098623.3	ENSMUST00000184382.3	131	1	27	-3088	27	3088	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71248681	71251873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_71248700_71251900
Isoform_6407_4	chr11	-	4569	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	-21	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86148391	86102934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
Isoform_64071_4	chr6	-	2756	1	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12125194	12122438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_12122400_12125200
Isoform_64072_4	chr6	-	223	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACATATAGATTCC	NA	False	NA	NA	False	NA	NA	NA	71541101	71540878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_71540900_71541100
Isoform_64074_4	chr6	+	657	1	FSM	ENSMUSG00000058706.6	ENSMUST00000205578.2	3900	1	0	3243	0	-1202	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	8309	False	NA	NA	False	NA	NA	NA	72324299	72324956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72324300_72325000
Isoform_64075_7	chr6	-	2675	1	FSM	ENSMUSG00000055850.13	ENSMUST00000206319.2	2410	1	-270	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCGTGTGGTTCTGC	8447	False	NA	NA	False	TATAAA	-10	NA	72339376	72336701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72336700_72339400
Isoform_64076_20	chr6	-	1549	1	FSM	ENSMUSG00000053907.11	ENSMUST00000206783.2	755	1	0	-794	0	-608	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTACTGCA	NA	False	NA	NA	False	NA	NA	NA	72416539	72414990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_72415000_72416500
Isoform_64077_3	chr6	+	1561	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGGAGTCTGGAGCTA	1663	False	NA	NA	False	AATAAA	-15	NA	72416033	72417594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_72416000_72417600
Isoform_64078_9	chr6	+	2208	2	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72877070	72879322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_72878885_72878928
Isoform_64079_5	chr6	-	219	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATAACCTCATGTTCTA	NA	False	NA	-1	True	AAAACA	-24	NA	72888011	72887792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_-_72887800_72888000
Isoform_6408_16	chr11	-	4497	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-15	1424	0	-17	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	86148391	86102930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
Isoform_64082_6	chr6	-	1436	1	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGGAAC	-3	True	NA	NA	False	NA	NA	NA	13608033	13606597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_-_13606600_13608000
Isoform_64083_4	chr6	+	171	1	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	75862847	75863018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_75862800_75863000
Isoform_64084_5	chr6	+	659	1	Genic_Genomic	ENSMUSG00000035125.11	novel	NA	NA	NA	NA	-19	-6859	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAGATTAAAAATAAT	NA	False	NA	NA	False	TTTAAA	-24	NA	81900630	81901289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_+_81900600_81901300
Isoform_64088_3	chr6	+	625	1	Antisense	novelGene_ENSMUSG00000000628.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACATAAATTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	82703002	82703627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr6_+_82703000_82703600
Isoform_64092_40	chr6	+	172	1	ISM	ENSMUSG00000009145.7	ENSMUST00000077502.5	3257	12	9014	289	8761	-289	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	4559	False	NA	25	True	NA	NA	NA	83043838	83044010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr6_+_83043800_83044000
Isoform_64093_3	chr6	-	3196	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	-26	1268	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	7218	False	NA	NA	False	NA	NA	NA	83047232	83044036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr6_-_83044000_83047200
Isoform_64094_4	chr6	+	176	1	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGATTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	83074152	83074328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_83074200_83074300
Isoform_64099_9	chr6	+	2703	1	NIC	ENSMUSG00000045160.15	novel	554	4	NA	NA	-13	-1017	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	381	False	NA	NA	False	NA	NA	NA	83326459	83329162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr6_+_83326500_83329200
Isoform_641_37	chr10	-	2477	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	15	-1	15	1	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	7539052	7505143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_64101_3	chr6	-	664	1	FSM	ENSMUSG00000052419.8	ENSMUST00000185219.2	1606	1	0	942	0	-801	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAAGGCTT	1	True	NA	NA	False	NA	NA	NA	13871464	13870800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_-_13870800_13871500
Isoform_64102_3	chr6	+	1056	1	FSM	ENSMUSG00000034744.14	ENSMUST00000205681.2	752	1	-1048	744	-14	-744	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAAAACAA	9470	False	NA	NA	False	NA	NA	NA	83772175	83773231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr6_+_83772200_83773200
Isoform_64104_10	chr6	+	187	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAGGATTAACTTCAC	3510	False	NA	21	True	NA	NA	NA	83870930	83871117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_83870900_83871100
Isoform_64106_42	chr7	-	3341	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9609	False	NA	85	True	NA	NA	NA	3218926	3204499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
Isoform_64107_3	chr7	-	3449	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9501	False	NA	85	True	NA	NA	NA	3219034	3204499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
Isoform_64108_29	chr7	-	3319	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	128	2	30	-2	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9634	False	NA	85	True	NA	NA	NA	3218901	3204499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
Isoform_64109_27	chr7	-	3344	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	103	2	5	-2	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9609	False	NA	85	True	NA	NA	NA	3218926	3204499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
Isoform_6411_5	chr11	-	3591	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	1210	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86435600	86391648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_64110_34	chr7	-	1129	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	37	0	-8	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632891	3623322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
Isoform_64112_14	chr7	-	1098	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632890	3623322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
Isoform_64113_16	chr7	-	830	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	261	0	-44	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632622	3623322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
Isoform_64116_27	chr7	-	1853	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	370	-1	370	1	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGCACCATCAATACTT	9073	False	NA	-18	True	NA	NA	NA	3668469	3663095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
Isoform_64117_3	chr7	-	606	4	ISM	ENSMUSG00000078813.4_ENSMUSG00000019734.17	ENSMUST00000136678.3	1529	6	3279	-164	-320	-3	3prime_fragment	FALSE	canonical	3	25	junction_3	7.48331477354788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTTGCGTTTTGAAAC	7340	False	NA	-16	True	AATAAA	-12	NA	3670202	3668792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046
Isoform_64118_11	chr7	-	2293	15	FSM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	16	1	-13	0	multi-exon	FALSE	canonical	3	9	junction_12	9.74077271376478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	5414	False	NA	-13	True	AATAAA	-15	NA	3680536	3668789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
Isoform_64119_3	chr7	-	1537	8	ISM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	3	4924	3	-23	5prime_fragment	FALSE	canonical	3	9	junction_5	4.6246897303539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCTAAAAAAAATAA	5401	False	NA	NA	False	NA	NA	NA	3680549	3673712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
Isoform_64121_127	chr7	-	2314	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	564	0	3	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7957	False	NA	-2	True	AATAAA	-15	NA	3695958	3680787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_64124_14	chr7	-	2899	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7372	False	NA	-2	True	AATAAA	-15	NA	3696543	3680787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_64125_11	chr7	-	4029	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_3	25.2762514801718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7930	False	NA	-2	True	AATAAA	-15	NA	3695985	3680787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
Isoform_64127_21	chr7	-	687	2	FSM	ENSMUSG00000063838.7	ENSMUST00000140410.2	362	2	188	-513	188	-3	multi-exon	FALSE	canonical	3	148	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167253	4154261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4154787_4167091
Isoform_64128_64	chr7	-	867	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	155	3	155	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167704	4154261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_64130_8	chr7	-	949	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	73	3	73	-3	multi-exon	FALSE	canonical	3	137	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTCTATTCACTTTA	NA	False	NA	-2	True	CATAAA	-19	NA	4167786	4154261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_64131_3	chr7	-	2313	3	FSM	ENSMUSG00000043432.8_ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	155	-1443	155	1443	multi-exon	FALSE	canonical	3	137	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTCCAGAGCCCG	NA	False	NA	NA	False	AATAAA	-11	NA	4167704	4152815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4154787_4167091_4167187_4167457
Isoform_64132_20	chr7	-	3031	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	0	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAATTTGTCATTGTCC	NA	False	NA	-5	True	AATAAA	-19	NA	4448648	4428668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
Isoform_64134_129	chr7	-	2974	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	9	0	-7	0	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9950	False	NA	-3	True	AATAAA	-17	NA	4504670	4484518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_64135_4	chr7	-	3880	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	232	junction_7	20.8868379607829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9939	False	NA	-3	True	AATAAA	-17	NA	4504681	4484518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_64136_45	chr7	-	3001	22	FSM	ENSMUSG00000019254.17	ENSMUST00000124248.8	2667	22	-334	0	-15	0	multi-exon	FALSE	canonical	3	46	junction_7	53.3921869151542	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9926	False	NA	-3	True	AATAAA	-17	NA	4504694	4484518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_64138_6	chr7	-	3013	22	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	60.8223687817047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9931	False	NA	-3	True	AATAAA	-17	NA	4504689	4484518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4485158_4485235_4485287_4485377_4485449_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
Isoform_64139_5	chr7	-	688	4	FSM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	-77	-126	-77	3	multi-exon	FALSE	canonical	3	16	junction_3	18.0800688297608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	7253	False	NA	-8	True	AATAAA	-22	NA	4511101	4507658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4510686
Isoform_6414_3	chr11	-	2452	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCACAGCTGTGGCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	86435602	86392861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
Isoform_64140_3	chr7	-	863	6	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4445	-95	15	3	3prime_fragment	TRUE	canonical	3	28	junction_3	11.499565209172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9900	False	NA	-8	True	AATAAA	-22	NA	4512922	4507658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556
Isoform_64141_6	chr7	-	694	7	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4298	-95	-132	3	3prime_fragment	FALSE	canonical	3	24	junction_6	12.1849178176228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9753	False	NA	-8	True	AATAAA	-22	NA	4513069	4507658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950
Isoform_64142_3	chr7	-	903	13	FSM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	-15	-3	1	3	multi-exon	FALSE	canonical	0	0	junction_8	20.3570558338435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCAGGGTTGTTATT	9182	False	NA	-8	True	AATAAA	-22	NA	4518973	4507658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335_4517379_4518929
Isoform_64143_4	chr7	-	815	8	FSM	ENSMUSG00000035458.16	ENSMUST00000098859.10	912	8	94	3	-7	0	multi-exon	FALSE	canonical	3	16	junction_6	4.77664385637157	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAACTGTGTGTCTGCT	7011	False	NA	-5	True	AATAAA	-14	NA	4525433	4521306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525068_4525082_4525303
Isoform_64144_4	chr7	-	751	3	ISM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	-10	8372	-10	-8372	5prime_fragment	FALSE	canonical	3	9	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	4535462	4534303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_4534880_4535185_4535275_4535376
Isoform_64145_53	chr7	-	3318	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	29	515	0	-515	multi-exon	TRUE	canonical	3	244	junction_23	30.5598053220771	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	4661989	4635008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_64146_12	chr7	-	3344	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	3	515	3	-515	multi-exon	FALSE	canonical	3	244	junction_23	30.5598053220771	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	4662015	4635008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_64148_3	chr7	-	3126	24	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	-515	combination_of_known_junctions	FALSE	canonical	1	7	junction_23	66.7413255551761	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	4661995	4635008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661677
Isoform_6415_34	chr11	-	2333	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	35	3163	4	-1	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACAGCTGTGGCTTGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	86435596	86392859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_64150_12	chr7	-	1545	7	ISM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	375	-3	-32	3	3prime_fragment	FALSE	canonical	3	470	junction_6	31.2663290671184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTCTTGCATTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	4687692	4663516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
Isoform_64153_113	chr7	-	1427	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687982	4663513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
Isoform_64155_128	chr7	-	1509	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTCTTGCATTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	4687982	4663515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
Isoform_64156_197	chr7	-	1479	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	30	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687950	4663513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
Isoform_64157_10	chr7	-	1599	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4688070	4663513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
Isoform_64158_140	chr7	-	1479	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	117	-3	30	3	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTCTTGCATTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	4687950	4663516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
Isoform_6416_9	chr11	-	3544	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	35	1952	4	1210	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86435596	86391648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_64160_8	chr7	-	1144	2	FSM	ENSMUSG00000051811.15	ENSMUST00000182272.2	519	2	-495	-130	0	0	multi-exon	FALSE	canonical	3	648	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTTTCTTTTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	4756022	4754793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755059
Isoform_64161_10	chr7	-	584	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182111.8	585	3	0	1	0	-1	multi-exon	FALSE	canonical	3	648	junction_1	77.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755059_4755161_4755722
Isoform_64162_163	chr7	-	481	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	71	1	0	-1	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
Isoform_64163_9	chr7	-	515	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182048.2	465	4	12	-62	-3	-1	multi-exon	FALSE	canonical	3	33	junction_3	332.524017511852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756025	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755059_4755161_4755722_4755880_4755951
Isoform_64165_5	chr7	-	495	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183334.8	490	4	0	-5	0	2	multi-exon	FALSE	canonical	3	20	junction_2	338.542299999408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTTTCTCGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	4756022	4754788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755059_4755172_4755722_4755849_4755951
Isoform_64167_4	chr7	-	450	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183971.8	401	4	-51	2	0	0	multi-exon	FALSE	canonical	3	74	junction_1	343.653895656662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756022	4754792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755089_4755161_4755722_4755849_4755951
Isoform_64168_8	chr7	-	442	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182738.8	423	4	-18	-1	-4	-1	multi-exon	FALSE	canonical	3	34	junction_1	362.510076488303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756026	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755102_4755161_4755722_4755849_4755951
Isoform_64170_30	chr7	-	434	4	FSM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	378.537830195198	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4754975_4755106_4755161_4755722_4755849_4755951
Isoform_64171_10	chr7	-	567	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182173.2	391	3	-24	-152	-3	0	multi-exon	FALSE	canonical	3	803	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTTTCTTTTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	4756025	4754793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4755161_4755722_4755849_4755951
Isoform_64172_17	chr7	-	1128	2	NIC	ENSMUSG00000051811.15	novel	490	4	NA	NA	0	-1	intron_retention	FALSE	canonical	3	803	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4755849_4755951
Isoform_64173_60	chr7	-	666	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	94	615	94	0	multi-exon	FALSE	canonical	3	322	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGCTTGCCTGTCTGGT	256	False	NA	-6	True	GATAAA	-16	NA	4792561	4788170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4788279_4792003
Isoform_64180_8951	chr7	-	993	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	239	6	0	-6	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	8951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGTTTCTATGCCTGA	NA	False	NA	-31	True	AATAAA	-9	NA	4815350	4811018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
Isoform_64188_6	chr9	+	805	2	Genic_Genomic	ENSMUSG00000118653.2	novel	988	1	NA	NA	-27	-19	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	56344713	56345709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_56345046_56345236
Isoform_64193_16	chr7	-	2481	4	NNC	ENSMUSG00000061374.15	novel	2546	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.145241191992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2857	False	NA	-4	True	AATAAA	-14	NA	5017652	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_5010959_5010998_5012205_5015676_5016022_5017623
Isoform_64195_225	chr7	-	2560	4	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.586220720504	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	4212	False	NA	-4	True	AATAAA	-14	NA	5016297	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_5010970_5010991_5012205_5015676_5016022_5016207
Isoform_64196_202	chr7	-	2522	4	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.586220720504	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	4252	False	NA	-4	True	AATAAA	-14	NA	5016257	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_5010968_5010987_5012205_5015676_5016022_5016207
Isoform_64198_16	chr7	-	2656	3	FSM	ENSMUSG00000061374.15	ENSMUST00000167804.9	2637	3	-19	0	-3	0	multi-exon	FALSE	canonical	1	2	junction_2	221	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	3238	False	NA	-4	True	AATAAA	-14	NA	5017271	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_5012205_5015676_5016022_5017107
Isoform_64199_53	chr7	-	2609	3	FSM	ENSMUSG00000061374.15	ENSMUST00000165320.3	2653	3	44	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	217.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2857	False	NA	-4	True	AATAAA	-14	NA	5017652	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_5012205_5015676_5016022_5017535
Isoform_64200_359	chr7	-	2546	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	130	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2832	False	NA	-4	True	AATAAA	-14	NA	5017677	5010057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_5012205_5015676_5016022_5017623
Isoform_64205_3	chr7	-	1865	2	FSM	ENSMUSG00000043290.7	ENSMUST00000062428.5	2153	2	6	282	6	-282	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTTGTATTCCAATTC	NA	False	NA	NA	False	ATTAAA	-24	NA	5041439	5037719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_5039479_5041333
Isoform_64206_6	chr7	-	1890	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	6	1	6	-1	multi-exon	FALSE	canonical	3	46	junction_1	59	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCACTGCCTGTTTCTTG	9632	False	NA	-2	True	AATAAA	-19	NA	6158964	6134490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_6136171_6146060_6146150_6158843
Isoform_64207_4	chr7	-	2183	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	-287	1	-261	-1	multi-exon	FALSE	canonical	3	46	junction_1	59	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCACTGCCTGTTTCTTG	9339	False	NA	-2	True	AATAAA	-19	NA	6159257	6134490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_6136171_6146060_6146150_6158843
Isoform_64208_4	chr7	-	2539	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	7	4	0	-4	multi-exon	FALSE	canonical	3	15	junction_1	5.61248608016091	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTTGATTATTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	6334277	6318662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
Isoform_64209_11	chr7	-	5913	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	0	2781	0	2722	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGTTACATT	NA	False	NA	NA	False	NA	NA	NA	6733420	6709671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
Isoform_64210_110	chr7	-	2013	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	28	1	-15	-1	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAATGACTCTTGAGG	6264	False	NA	-6	True	AATAAA	-20	NA	7124459	7117689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
Isoform_64211_3	chr7	-	3028	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	1	-1	1	1	multi-exon	TRUE	canonical	3	13	junction_1	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTTGCGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	7139753	7133672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
Isoform_64212_35	chr7	-	2774	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	1	2	1	-2	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCATGACTATTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	7212996	7205117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
Isoform_64218_3	chr7	-	4099	11	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	486	-1793	-5	0	3prime_fragment	FALSE	canonical	3	23	junction_10	8.12465383877984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301775	7285307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
Isoform_6422_293	chr11	-	1954	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	0	833	0	232	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAATTGTGTCCGTTTTCT	9872	False	NA	-5	True	TATAAA	-18	NA	86574662	86475523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
Isoform_64220_6	chr7	-	2551	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-202	-1524	-3	1094	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCACTTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	8865853	8857751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
Isoform_64221_17	chr7	-	4200	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	3	-4	3	4	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTATTAAGACTTCATT	NA	False	NA	-2	True	NA	NA	NA	10229318	10221151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
Isoform_64222_4	chr7	-	2798	4	FSM	ENSMUSG00000095936.4	ENSMUST00000210521.2	1745	4	0	-1053	0	1053	multi-exon	FALSE	canonical	1	3	junction_3	9.89949493661167	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTCGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	11044609	11039251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_11041336_11041419_11041580_11043399_11043872_11044527
Isoform_64223_7	chr7	-	3693	7	FSM	ENSMUSG00000070822.6	ENSMUST00000211392.2	3709	7	13	3	13	-3	multi-exon	FALSE	canonical	3	19	junction_4	11.5854314646552	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGCCTCATTGTT	NA	False	NA	-4	True	AATAAA	-17	NA	12514568	12502021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039_12509586_12514498
Isoform_64225_12	chr7	-	546	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	4	6177	0	-5062	multi-exon	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATTAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	12552781	12545085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12545594_12552743
Isoform_64226_4	chr7	-	2430	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	-217	-42	-13	42	multi-exon	FALSE	canonical	3	66	junction_2	65	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGCCTCGTAGGCTTT	NA	False	NA	-3	True	AATAAA	-14	NA	12743974	12739595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12740308_12740950_12742257_12743562
Isoform_64227_25	chr7	-	2233	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	-17	-45	-17	45	multi-exon	FALSE	canonical	3	66	junction_2	65	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743774	12739592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12740308_12740950_12742257_12743562
Isoform_64228_68	chr7	-	2209	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	9	-47	1	47	multi-exon	FALSE	canonical	3	66	junction_2	65	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGTAGGCTTTCTGGG	NA	False	NA	2	True	AATAAA	-19	NA	12743748	12739590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12740308_12740950_12742257_12743562
Isoform_6423_4	chr11	-	2444	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	-52	395	-52	-395	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCATTAAGCCCCAGCA	9976	False	NA	NA	False	AATAAA	-18	NA	86574714	86475085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
Isoform_64230_13	chr7	-	2158	3	FSM	ENSMUSG00000049600.9	ENSMUST00000210282.2	3908	3	-21	1771	1	42	multi-exon	FALSE	canonical	3	10	junction_2	93	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGCCTCGTAGGCTTT	NA	False	NA	-3	True	AATAAA	-14	NA	12743748	12739595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12740308_12740950_12742257_12743608
Isoform_64231_79	chr7	-	2078	3	NIC	ENSMUSG00000049600.9	novel	2722	4	NA	NA	0	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743749	12739592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_64232_28	chr7	-	2300	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	-12	43	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGCCTCGTAGGCTTTC	NA	False	NA	-2	True	AATAAA	-15	NA	12743973	12739594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_64233_39	chr7	-	2133	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	-47	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743804	12739592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_12740308_12740950_12742257_12743692
Isoform_64234_14	chr7	-	2237	3	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	167	45	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743560	12739592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_12740308_12740950_12742257_12743344
Isoform_64238_37	chr7	-	915	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	10	5	3	-1	multi-exon	FALSE	canonical	3	206	junction_5	1091.38616447159	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	7101	False	NA	-12	True	AATAAA	-16	NA	12768568	12765941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
Isoform_64240_871	chr7	-	885	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	63	1	-5	-1	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	6998	False	NA	-12	True	AATAAA	-16	NA	12768671	12765941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
Isoform_64244_27	chr7	-	734	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	-4	-4	-4	-1	multi-exon	FALSE	canonical	3	151	junction_3	1108.87882115225	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAAGGCTGTGAGCT	6999	False	NA	-12	True	AATAAA	-16	NA	12768670	12765941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
Isoform_64246_26	chr7	-	703	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	-100	3	-5	2	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTACCAAGGCTGTGAG	6998	False	NA	-14	True	AATAAA	-14	NA	12768671	12765943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
Isoform_6425_12	chr11	-	1178	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	233	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTGTCCGTTTTCTT	NA	False	NA	-4	True	TATAAA	-19	NA	86512133	86475522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
Isoform_64252_55	chr7	-	1076	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	396	0	-131	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8839	False	NA	-3	True	ATTAAA	-17	NA	12771804	12769164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
Isoform_64256_8	chr7	-	1163	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	309	0	-218	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8752	False	NA	-3	True	ATTAAA	-17	NA	12771891	12769164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
Isoform_64257_3	chr7	-	3378	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	-31	-1	-31	0	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1613	False	NA	-5	True	AATAAA	-15	NA	13012678	12992893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
Isoform_64258_4	chr7	-	3297	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	47	2	-4	-2	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCAGGCTGAGTTCG	1691	False	NA	-8	True	AATAAA	-12	NA	13012600	12992896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
Isoform_64259_25	chr7	-	1347	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-10	7	-10	-7	multi-exon	FALSE	canonical	3	46	junction_1	9.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTGCCAGTTTT	NA	False	NA	13	True	AATAAA	-29	NA	15573613	15567172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_15567876_15568304_15568891_15573555
Isoform_6426_5	chr11	-	1919	7	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	53292	-41	-512	41	3prime_fragment	FALSE	canonical	3	1101	junction_5	63.4623685519397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATGGTTTTCATAGT	7331	False	NA	-4	True	ATTAAA	-14	NA	86595035	86585439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905
Isoform_64260_520	chr7	-	678	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	52	6	52	-6	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGGGAGATGTTTATT	NA	False	NA	-17	True	AATAAA	-15	NA	15656275	15651138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
Isoform_64264_143	chr7	-	456	6	ISM	ENSMUSG00000041560.13	ENSMUST00000198688.5	1455	13	6322	-1	6271	1	3prime_fragment	FALSE	canonical	3	1334	junction_1	271.852165707761	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGGGGTCTTGTTATT	NA	False	NA	-8	True	AATAAA	-13	NA	15673404	15671761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378
Isoform_64265_73	chr7	-	1511	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	11	1654	-8	1	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGGGGTCTTGTTATT	NA	False	NA	-8	True	AATAAA	-13	NA	15679988	15671761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
Isoform_64266_6	chr7	-	740	5	ISM	ENSMUSG00000041560.13	ENSMUST00000197477.5	1793	12	6271	-1	6271	1	3prime_fragment	FALSE	canonical	3	1853	junction_4	85.0191154976338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGGGGTCTTGTTATT	NA	False	NA	-8	True	AATAAA	-13	NA	15673404	15671761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378
Isoform_64267_4	chr7	-	1795	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	1	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGGGGTCTTGTTATT	NA	False	NA	-8	True	AATAAA	-13	NA	15679988	15671761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
Isoform_64269_80	chr7	-	290	2	ISM	ENSMUSG00000041560.13	ENSMUST00000200455.2	444	4	-8	2451	-8	-2451	5prime_fragment	FALSE	canonical	3	1867	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAAGGTGAGGAGTGC	NA	False	NA	-8	True	NA	NA	NA	15679988	15679223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_15679280_15679754
Isoform_64270_27	chr7	-	3835	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3041	-70	3041	-7	3prime_fragment	FALSE	canonical	3	60	junction_12	12.4347184215093	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATTAATTAATTGTT	6948	False	NA	-11	True	AAGAAA	-35	NA	15952877	15931078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
Isoform_64272_8	chr7	-	3827	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-24	-2	-19	2	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTCCCTCACCCTCA	8418	False	NA	1	True	AATAAA	-21	NA	15955981	15931143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
Isoform_64273_8	chr7	-	3881	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-12	-68	-7	-6	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTAATTAATTGTTT	8430	False	NA	-10	True	AAGAAA	-36	NA	15955969	15931077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
Isoform_64274_19	chr7	-	2167	14	FSM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	10	-2	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	66.2157134678708	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020705	16007967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64275_10	chr7	-	2164	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	68.79796336603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020699	16007967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16008342_16009180_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64276_13	chr7	-	2137	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	66.5924636352925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020699	16007967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16008342_16009204_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64277_15	chr7	-	2139	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	69.1555146542963	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020698	16007967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16008342_16009204_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64278_3	chr7	-	1953	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	66.4748756366576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACACCCACCCCACTGT	NA	False	NA	-12	True	AATAAA	-16	NA	16019949	16009399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16019851
Isoform_64279_70	chr7	-	1928	12	ISM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	16	1432	0	0	5prime_fragment	FALSE	canonical	3	130	junction_1	29.1238449918179	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACACCCACCCCACT	NA	False	NA	-14	True	AATAAA	-14	NA	16020699	16009401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64280_3	chr7	-	3344	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	130	junction_1	30.5050815439002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGACACCCACCCCAC	NA	False	NA	-15	True	AATAAA	-13	NA	16020701	16009402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64281_55	chr7	-	1940	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	37.3980155923805	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCACTGTGTCCTTGA	NA	False	NA	-4	True	AATAAA	-24	NA	16020698	16009391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
Isoform_64284_788	chr7	-	1921	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-50	4	-29	-4	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTTGCTTGTCTCCTCT	NA	False	NA	-8	True	AATAAA	-13	NA	16121760	16060978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
Isoform_64285_835	chr7	-	1894	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-21	2	0	-2	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTGTCTCCTCTGT	NA	False	NA	-6	True	AATAAA	-15	NA	16121731	16060976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
Isoform_64295_16	chr7	-	2797	3	NIC	ENSMUSG00000048920.9	novel	2827	3	NA	NA	0	-27	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	12.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCCGTTTGTTTCCT	NA	False	NA	NA	False	TTTAAA	-19	NA	16550657	16543197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16545902_16548988_16549049_16550624
Isoform_64297_37	chr7	-	2797	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	3	27	3	-27	multi-exon	FALSE	canonical	3	12	junction_2	10.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCCGTTTGTTTCCT	NA	False	NA	NA	False	TTTAAA	-19	NA	16550654	16543197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16545902_16548988_16549052_16550624
Isoform_6430_68	chr11	-	6137	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	75	307	11	-3	multi-exon	TRUE	canonical	3	813	junction_25	122.673691341487	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTAGAATTGCAG	NA	False	NA	-10	True	AATAAA	-16	NA	86648316	86585483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_64300_2575	chr7	-	2171	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	119	0	119	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657920	16649303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_64301_46	chr7	-	2308	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16658057	16649303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_64302_295	chr7	-	2216	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	74	0	74	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657965	16649303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
Isoform_6431_40	chr11	-	6209	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	3	307	3	-3	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTAGAATTGCAG	NA	False	NA	-10	True	AATAAA	-16	NA	86648388	86585483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
Isoform_64316_3373	chr7	-	1965	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	93	14	-14	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	3373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761748	16738578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_64317_360	chr7	-	2014	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	44	14	22	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761797	16738578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_64318_62	chr7	-	2058	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	0	14	0	-14	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761841	16738578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_64321_114	chr7	-	2248	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-17	-14	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCATCTCAAACCCACC	NA	False	NA	-17	True	AATAAA	-23	NA	16761751	16738578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
Isoform_6433_101	chr11	-	2773	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	135	905	135	-905	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTTCAAGGCCTTCTT	8662	False	NA	-7	True	ATTAAA	-15	NA	86698437	86660576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
Isoform_64332_146	chr7	-	2005	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	17	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	27.4902887640592	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2777	False	NA	-1	True	AATAAA	-18	NA	18644323	18624807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
Isoform_64333_107	chr7	-	1960	14	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	24	0	combination_of_known_junctions	TRUE	canonical	3	82	junction_7	38.5657050949086	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2810	False	NA	-1	True	AATAAA	-18	NA	18644290	18624807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
Isoform_64334_13	chr7	-	2064	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	25	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTGTCTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-16	NA	18757490	18747208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18749056_18757273
Isoform_64335_13	chr7	-	2755	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	-6	-39	-6	39	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAATAAAATGA	7198	False	NA	NA	False	ATTAAA	-29	NA	18883222	18873587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
Isoform_64336_20	chr7	-	2700	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	49	-39	49	39	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAATAAAATGA	7253	False	NA	NA	False	ATTAAA	-29	NA	18883167	18873587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
Isoform_64337_24	chr7	-	2010	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	92	608	92	-608	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTGGCCTGGAACT	7296	False	NA	NA	False	NA	NA	NA	18883124	18874234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
Isoform_64339_14	chr7	-	2109	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	-6	607	-6	-607	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCCTGGAACTT	7198	False	NA	NA	False	NA	NA	NA	18883222	18874233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
Isoform_6434_4	chr11	-	3700	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	113	0	113	0	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	8640	False	NA	-8	True	ATTAAA	-7	NA	86698459	86659671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
Isoform_64346_576	chr7	-	2248	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-35	2	-35	-2	multi-exon	FALSE	canonical	3	1236	junction_9	117.461666323765	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005777	18990855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_64347_2270	chr7	-	2213	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	0	2	0	-2	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005742	18990855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_6436_15	chr11	-	4879	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-33	1	-33	-1	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGGGAGAATGTCTGT	NA	False	NA	-9	True	AATAAA	-15	NA	86884566	86827251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
Isoform_64363_78	chr7	-	2238	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAAGGTCTCTGGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	19005776	18990861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_64364_408	chr7	-	2210	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCTGGAGTACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	19005742	18990855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
Isoform_64374_4	chr7	-	1529	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	118	1	118	-1	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTTCTTCGTTGTTG	9673	False	NA	0	True	AATAAA	-16	NA	19013871	19010730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
Isoform_64375_5	chr7	-	1395	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	247	6	-216	-6	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCATTCCCTTTCTTCGT	9802	False	NA	-5	True	AATAAA	-11	NA	19013742	19010735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
Isoform_64376_4	chr7	-	2166	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.490987293304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTTACTTTTGATA	2196	False	NA	-16	True	NA	NA	NA	19093368	19089935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_19090087_19090124_19091942_19093014_19093157_19093312
Isoform_64378_4	chr7	-	1889	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	4	346	4	-346	multi-exon	FALSE	canonical	3	228	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTTCTGCCTCTTAT	2162	False	NA	-8	True	ATTAAA	-25	NA	19093402	19090284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19091942_19093014_19093157_19093312
Isoform_64387_5	chr7	-	1850	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	42	347	42	-347	multi-exon	FALSE	canonical	3	228	junction_1	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGGTTCTGCCTCTTA	2200	False	NA	-9	True	ATTAAA	-24	NA	19093364	19090285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19091942_19093014_19093157_19093312
Isoform_64393_9	chr7	-	1812	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	39	-2	-4	-1	multi-exon	FALSE	canonical	3	11	junction_12	5.52959210872636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCGATCTGCTCAAT	6371	False	NA	NA	False	NA	NA	NA	19133807	19128362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
Isoform_64394_3	chr7	-	1766	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	-2	85	-2	-24	multi-exon	FALSE	canonical	3	11	junction_12	5.52959210872636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGTGTTTGCCGAGG	6330	False	NA	NA	False	ATTAAA	-13	NA	19133848	19128449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
Isoform_64395_15	chr7	-	1821	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	2	0	2	0	multi-exon	TRUE	canonical	2	9	junction_12	5.99247212944893	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCGATCTGCTCAATT	2151	False	NA	NA	False	NA	NA	NA	19138027	19128361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
Isoform_64397_4	chr7	-	3648	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	-12	330	-12	-3	multi-exon	TRUE	canonical	2	4	junction_2	31.7309188501163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACGTACAGAGTCCG	NA	False	NA	-6	True	NA	NA	NA	19192758	19159029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_644_69	chr10	-	2430	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	320	7	15	1	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	7539052	7505143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_64400_171	chr7	-	3544	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	14	328	-12	-1	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACGTACAGAGTCCGTC	NA	False	NA	-4	True	NA	NA	NA	19192732	19159027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_64403_3	chr7	-	2346	13	ISM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	0	8019	0	-7327	5prime_fragment	FALSE	canonical	3	72	junction_12	12.5507303904328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTATAAGGAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	19192746	19166718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
Isoform_64404_24	chr7	-	1844	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	15	1329	15	-1329	multi-exon	FALSE	canonical	3	24	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACCCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	19242277	19239739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19241536_19242229
Isoform_64406_320	chr7	-	2974	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	842	0	842	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8356	False	NA	-6	True	AATAAA	-15	NA	19296159	19264724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_64408_66	chr7	-	3170	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	646	0	646	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8160	False	NA	-6	True	AATAAA	-15	NA	19296355	19264724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_64413_9	chr7	-	3077	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	842	-1	intron_retention	FALSE	canonical	3	93	junction_3	15.4117053292952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8356	False	NA	-7	True	AATAAA	-14	NA	19296159	19264725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_64417_6	chr7	-	3056	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	840	0	intron_retention	FALSE	canonical	3	79	junction_3	17.7102482354704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8354	False	NA	-6	True	AATAAA	-15	NA	19296161	19264724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
Isoform_64418_8	chr7	-	830	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	-37	-141	-37	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	3282	False	NA	-6	True	AATAAA	-22	NA	19306930	19298870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19299602_19306831
Isoform_64419_69	chr7	-	818	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-52	-3	-10	0	multi-exon	FALSE	canonical	3	225	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2892	False	NA	-6	True	AATAAA	-22	NA	19307320	19298870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19299602_19307233
Isoform_6442_55	chr11	-	2335	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	1	0	1	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	-8	True	AATAAA	-39	NA	86964887	86924692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
Isoform_64420_23	chr7	-	927	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	13	180	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTCTGGCTTTCCT	2915	False	NA	NA	False	AAGAAA	-15	NA	19307297	19298690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_19298802_19298849_19299602_19307233
Isoform_64421_9	chr7	-	1220	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-454	-3	26	0	multi-exon	FALSE	canonical	3	225	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	2490	False	NA	-6	True	AATAAA	-22	NA	19307722	19298870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19299602_19307233
Isoform_64422_13	chr7	-	908	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	11	180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTCTGGCTTTCCT	2475	False	NA	NA	False	AAGAAA	-15	NA	19307737	19298690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_19298802_19298849_19299602_19307692
Isoform_64423_17	chr7	-	797	2	NIC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	2453	False	NA	-7	True	AATAAA	-21	NA	19307759	19298871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19299602_19307692
Isoform_64424_21	chr7	-	2165	21	FSM	ENSMUSG00000061028.8	ENSMUST00000208068.2	2151	21	-9	-5	-7	0	multi-exon	FALSE	canonical	3	34	junction_6	53.6276747584678	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338395	19314962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_64426_12	chr7	-	2157	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_20	60.841104526463	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338395	19314962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337227_19338336
Isoform_64427_5	chr7	-	2208	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_20	61.2201764126828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338358	19314965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
Isoform_64428_248	chr7	-	2156	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	16	8	-7	0	multi-exon	FALSE	canonical	3	161	junction_6	32.5501152071694	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338395	19314967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_64429_8	chr7	-	2187	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	-7	0	-7	0	multi-exon	TRUE	canonical	3	161	junction_6	32.5501152071694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCCCCTTATTTAG	NA	False	NA	-1	True	AATAAA	-29	NA	19338418	19314959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_64430_5	chr7	-	2080	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_18	60.9291855432971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338412	19314962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19337114_19337231_19338336
Isoform_64432_50	chr7	-	2420	20	NIC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	5	0	intron_retention	FALSE	canonical	3	190	junction_19	27.1360581324836	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338406	19314967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_64433_11	chr7	-	2395	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	0	intron_retention	FALSE	canonical	3	13	junction_13	58.629500104883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338395	19314965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
Isoform_64435_17	chr7	-	2038	10	ISM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	1381	1	377	-1	3prime_fragment	FALSE	canonical	3	150	junction_9	33.2532371022398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGTCTTCTTTCTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	19361982	19340142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847
Isoform_64436_110	chr7	-	2321	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGGGGTCTTCTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	19362373	19340145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
Isoform_64440_9	chr7	-	2220	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	72.4309326185988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19362374	19340146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362101
Isoform_64441_6	chr7	-	2011	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	72.4309326185988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTTGGGGGTCTTCTT	NA	False	NA	-8	True	AATAAA	-13	NA	19362598	19340148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362532
Isoform_64442_13	chr7	-	2272	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	-77	5	-77	1	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19363440	19340146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
Isoform_64443_282	chr7	-	2194	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	4	2	4	-2	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGTCTTCTTTCTTC	NA	False	NA	-3	True	AATAAA	-18	NA	19363359	19340143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
Isoform_64446_5	chr7	-	2126	10	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.7681341729326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGTCTTCTTTCTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	19363359	19340142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19340867_19345547_19345626_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
Isoform_64449_1880	chr7	-	2459	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	13	1671	1	7	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	1880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCACCTCCTCTGCC	5161	False	NA	-10	True	AATAAA	-28	NA	19398945	19367166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
Isoform_64457_3	chr7	-	903	2	ISM	ENSMUSG00000040564.15	ENSMUST00000108451.4	532	3	-1	5	-1	-5	intron_retention	FALSE	canonical	3	1274	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACGCTCCCTGAAGTGC	NA	False	NA	-9	True	AATAAA	-14	NA	19426564	19423410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_19423562_19425812
Isoform_64458_13	chr7	-	493	3	FSM	ENSMUSG00000040564.15	ENSMUST00000108451.4	532	3	37	2	3	-2	multi-exon	FALSE	canonical	3	1274	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTCCCTGAAGTGCTTT	NA	False	NA	-6	True	AATAAA	-17	NA	19426526	19423407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19423562_19425812_19425961_19426335
Isoform_64459_242	chr7	-	408	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	22	2	0	-2	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTCCCTGAAGTGCTTT	NA	False	NA	-6	True	AATAAA	-17	NA	19426563	19423407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
Isoform_64460_4	chr7	-	785	3	NIC	ENSMUSG00000040564.15	novel	432	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	965	junction_2	154.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCCCTGAAGTGCTT	NA	False	NA	-7	True	AATAAA	-16	NA	19426566	19423408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19423562_19425812_19426412_19426533
Isoform_64468_8648	chr7	-	1111	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	136	161	0	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	8648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432977	19430194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
Isoform_64469_309	chr7	-	1142	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	105	161	-31	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19433008	19430194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
Isoform_64471_121	chr7	-	1244	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	3	161	3	2	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19433110	19430194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
Isoform_64481_228	chr7	-	1631	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	13	2	13	-2	multi-exon	TRUE	canonical	3	2643	junction_3	135.037899772619	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAAAAAAATAGGATC	9907	False	NA	-31	True	NA	NA	NA	19449337	19435255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
Isoform_64485_1130	chr7	-	1534	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	25	18	12	-2	multi-exon	FALSE	canonical	3	2342	junction_9	200.868177398407	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAAAAAAATAGGATC	9906	False	NA	-31	True	NA	NA	NA	19449338	19435255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
Isoform_64486_1061	chr7	-	1568	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	-9	18	-9	-2	multi-exon	FALSE	canonical	3	2342	junction_9	200.868177398407	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAAAAAAATAGGATC	9872	False	NA	-31	True	NA	NA	NA	19449372	19435255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
Isoform_64489_317	chr7	-	2644	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	72	19	32	-19	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTGTGTTTTCTGTGA	NA	False	NA	-21	True	NA	NA	NA	19483426	19450587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_64491_22	chr7	-	2668	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	48	19	8	-19	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTGTGTTTTCTGTGA	NA	False	NA	-21	True	NA	NA	NA	19483450	19450587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_64494_616	chr7	-	1920	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	32	3	32	-3	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGGGGTGTTTTGTA	NA	False	NA	-7	True	AATAAA	-13	NA	19483426	19458088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
Isoform_64496_535	chr7	-	2398	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	24	7	24	-7	multi-exon	FALSE	canonical	3	510	junction_11	49.5145824737624	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3936	False	NA	-12	True	AATAAA	-19	NA	19504448	19490062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_64497_1062	chr7	-	2370	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	52	7	0	-7	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3964	False	NA	-12	True	AATAAA	-19	NA	19504420	19490062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_64500_23	chr7	-	2277	13	ISM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	24	1814	24	-1388	5prime_fragment	FALSE	canonical	3	510	junction_9	43.4193857114026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGGAAAAAAGAAGAA	3936	False	NA	NA	False	NA	NA	NA	19504448	19491869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_64501_33	chr7	-	2249	13	ISM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	52	1814	0	-1388	5prime_fragment	FALSE	canonical	3	510	junction_9	43.4193857114026	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGGAAAAAAGAAGAA	3964	False	NA	NA	False	NA	NA	NA	19504420	19491869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
Isoform_64503_32	chr7	-	1652	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	9	1	5	-1	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCCGTGTGTGACAGA	NA	False	NA	0	True	AATAAA	-19	NA	19530725	19513643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
Isoform_64505_825	chr7	-	1835	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	15	0	15	0	multi-exon	TRUE	canonical	3	615	junction_1	42.6314144733669	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5744	False	NA	-8	True	AATAAA	-17	NA	19556680	19542386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_64506_28	chr7	-	1915	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	-66	1	-66	-1	multi-exon	FALSE	canonical	3	615	junction_1	42.6314144733669	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5663	False	NA	-9	True	AATAAA	-16	NA	19556761	19542387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_6451_5	chr11	-	3892	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	2	-70	-2	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCCAGAGTTCATGT	NA	False	NA	-15	True	ATTAAA	-14	NA	86999604	86979980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
Isoform_64510_14	chr7	-	2084	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	615	junction_1	42.8009154965982	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5729	False	NA	-10	True	AATAAA	-15	NA	19556695	19542388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_64512_21	chr7	-	1935	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_5	25.6395740039112	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_64513_28	chr7	-	2169	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	678	junction_4	25.3223660470783	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5729	False	NA	-10	True	AATAAA	-15	NA	19556695	19542388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
Isoform_64518_64	chr7	-	2852	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	47	6	0	-6	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTCCATTGTCCGAG	9978	False	NA	-7	True	NA	NA	NA	19655038	19637508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
Isoform_64521_38	chr7	-	2643	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	40	3719	18	416	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACATCTAGTCTTTT	NA	False	NA	NA	False	TATAAA	-23	NA	23907534	23897090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
Isoform_64522_3	chr7	-	2786	4	FSM	ENSMUSG00000074283.6	ENSMUST00000206362.2	2932	4	-126	272	-126	137	multi-exon	FALSE	canonical	1	1	junction_3	7.93025150224688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATAGAGAAGATCGGAT	NA	False	NA	NA	False	NA	NA	NA	23937111	23927268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23929266_23933775_23933903_23936042_23936101_23936507
Isoform_64523_4	chr7	-	5013	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-138	2229	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	2.49443825784929	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCGTTGTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	23937123	23924767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
Isoform_64524_8	chr7	-	2345	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	124	11	86	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23998976	23990474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_64525_13	chr7	-	2171	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	298	11	24	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23998802	23990474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_64526_8	chr7	-	2361	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	108	11	70	7	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCGTATCATGTGGA	NA	False	NA	-4	True	TATAAA	-12	NA	23998992	23990474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
Isoform_64527_3	chr7	-	2609	5	NIC	ENSMUSG00000074282.11	novel	2529	5	NA	NA	1	-35	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.26468052730799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTTAAAATACATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	24016048	24001255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015785
Isoform_64528_4	chr7	-	2485	5	FSM	ENSMUSG00000074282.11	ENSMUST00000032673.15	2529	5	41	3	-1	-3	multi-exon	FALSE	canonical	2	9	junction_1	0.866025403784439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATGTTTGAATTGTAT	NA	False	NA	NA	False	NA	NA	NA	24016050	24001223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
Isoform_64529_7	chr7	-	1061	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	-9	7	-9	-7	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAAATGTGTGCGCGTGC	993	False	NA	NA	False	AATAAA	-14	NA	24371484	24367438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
Isoform_6453_40	chr11	-	2009	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	26	1909	9	37	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGTATATGTATCTG	NA	False	NA	-1	True	AATAAA	-19	NA	87295323	87269379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
Isoform_64530_415	chr7	-	821	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	82	-4	-34	4	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGGTATTTTCTCTT	4577	False	NA	-1	True	AATAAA	-28	NA	24672097	24669172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
Isoform_64532_5	chr7	-	932	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	-32	-1	-32	1	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCCTGGTATTTTCT	4463	False	NA	-4	True	AATAAA	-25	NA	24672211	24669175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
Isoform_64533_4	chr7	-	2224	14	ISM	ENSMUSG00000040907.16	ENSMUST00000196684.2	3642	23	11488	0	11440	0	3prime_fragment	FALSE	canonical	3	25	junction_10	11.3648477030539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGTGTGTGTTATG	NA	False	NA	-4	True	AATATA	-15	NA	24693880	24677594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774
Isoform_64534_4	chr7	-	3609	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	9	3	-6	0	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGTGTGTGTTATG	NA	False	NA	-4	True	AATATA	-15	NA	24705374	24677594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
Isoform_64536_3	chr7	-	1700	5	NIC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	38.1903129078566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919292	24902264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919188
Isoform_64537_15	chr7	-	1677	5	FSM	ENSMUSG00000054499.10	ENSMUST00000206750.2	4594	5	-8	2925	4	0	multi-exon	FALSE	canonical	3	21	junction_4	29.7237278954037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919292	24902264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919211
Isoform_64538_7	chr7	-	1858	5	FSM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	-28	-2	-16	2	multi-exon	FALSE	canonical	2	7	junction_4	35.6405667743935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTCTCCGGTACTTT	NA	False	NA	-6	True	AATAAA	-29	NA	24919312	24902262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188
Isoform_64539_40	chr7	-	1866	5	NIC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	23.466731770743	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919345	24902264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211
Isoform_6454_3	chr11	-	685	2	ISM	ENSMUSG00000007646.14	ENSMUST00000129400.2	938	8	-77	22985	6	-22985	5prime_fragment	FALSE	canonical	3	159	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTAATTGGCTTCTGAG	NA	False	NA	NA	False	ACTAAA	-12	NA	87295326	87293194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_87293683_87295129
Isoform_64540_7	chr7	-	1979	6	NIC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.5316301306142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24920099	24902264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919211_24919353_24919993
Isoform_64541_3	chr7	-	1762	6	NNC	ENSMUSG00000054499.10	novel	4594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	37.6223337925759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCAGGCTCTCCGGTAC	NA	False	NA	-9	True	AATAAA	-26	NA	24919296	24902265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_24903357_24905232_24905315_24910573_24910724_24916969_24917093_24918225_24918457_24919211
Isoform_64542_82	chr7	-	2197	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	60	3	60	-3	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTGTCTGGCTGCCT	NA	False	NA	-3	True	AATAAA	-18	NA	24937216	24927685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
Isoform_64543_4	chr7	-	1933	11	Fusion	ENSMUSG00000040857.16_ENSMUSG00000057177.13	novel	2260	11	NA	NA	2	-3	intron_retention	FALSE	canonical	2	7	junction_10	113.923658649115	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTGTCTGGCTGCCT	4514	False	NA	-3	True	AATAAA	-18	NA	24950153	24927685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24950003
Isoform_64544_196	chr7	-	2707	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	31	767	0	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4512	False	NA	-15	True	AATAAA	-14	NA	24950155	24942752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
Isoform_64545_7	chr7	-	3478	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	32	-5	1	5	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATATGAATGTTTGGT	4513	False	NA	NA	False	NA	NA	NA	24950154	24941980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
Isoform_64547_9	chr7	-	2808	3	FSM	ENSMUSG00000040857.16	ENSMUST00000116343.3	690	3	1	-2119	1	-767	multi-exon	FALSE	canonical	3	7	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4513	False	NA	-15	True	AATAAA	-14	NA	24950154	24942752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24945175_24945512_24945748_24950003
Isoform_64549_15	chr7	-	1033	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	137	-311	137	1	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTCTGCTTTATGG	8740	False	NA	-1	True	ATTAAA	-16	NA	24997170	24994472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
Isoform_6455_8	chr11	-	1047	4	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	6795	0	3027	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.89897948556636	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCCGCTGTCTCTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	87759567	87754825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376
Isoform_64551_6	chr7	-	1221	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	-52	-310	0	0	multi-exon	FALSE	canonical	3	385	junction_2	17.4570902500961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8551	False	NA	-2	True	ATTAAA	-15	NA	24997359	24994473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
Isoform_64552_14	chr7	-	1174	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	-5	-310	-5	0	multi-exon	FALSE	canonical	3	385	junction_2	17.4570902500961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8598	False	NA	-2	True	ATTAAA	-15	NA	24997312	24994473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
Isoform_64553_105	chr7	-	848	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	53	0	1	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8552	False	NA	-2	True	ATTAAA	-15	NA	24997358	24994473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
Isoform_64554_10	chr7	-	902	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8498	False	NA	-2	True	ATTAAA	-15	NA	24997412	24994473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
Isoform_64555_44	chr7	-	2791	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	700	122	700	-4	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGAGTGTGTTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	25095104	25079073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
Isoform_64557_26	chr7	-	3107	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	382	124	382	-6	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGGGAGTGTGTTT	NA	False	NA	-6	True	AATAAA	-21	NA	25095422	25079075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
Isoform_6456_8	chr11	-	1737	6	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	5262	0	1494	0	3prime_fragment	FALSE	canonical	2	6	junction_4	6.99714227381436	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCCGCTGTCTCTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	87761100	87754825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376_87759548_87760072_87760329_87760646
Isoform_64560_348	chr7	-	1668	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	231	0	231	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9913	False	NA	-9	True	AGTAAA	-19	NA	25358175	25329370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
Isoform_64561_7	chr7	-	1930	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9651	False	NA	-9	True	AGTAAA	-19	NA	25358437	25329370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
Isoform_64562_5	chr7	-	1719	10	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	113.260216065527	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9913	False	NA	-9	True	AGTAAA	-19	NA	25358175	25329370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25348652_25348704_25358057
Isoform_64563_41	chr7	-	2971	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	53	8	10	-8	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCATCCATTCATCTG	NA	False	NA	-11	True	ATTAAA	-16	NA	25418460	25410538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
Isoform_64564_3	chr7	-	1206	4	FSM	ENSMUSG00000002608.9	ENSMUST00000154143.8	1158	4	4	-52	4	52	multi-exon	FALSE	canonical	3	101	junction_2	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGGGACAG	NA	False	NA	NA	False	NA	NA	NA	25418424	25413506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25413908_25414175_25414446_25415159_25415613_25418342
Isoform_64567_61	chr7	-	3798	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-15	1	-15	-1	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCAGGGTTGAAACCC	9527	False	NA	-29	True	AATAAA	-24	NA	25454197	25420590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_64568_123	chr7	-	3465	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	2	317	2	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9544	False	NA	NA	False	NA	NA	NA	25454180	25420906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_6457_4	chr11	-	3942	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	-3493	1738	28	-1108	multi-exon	FALSE	canonical	3	631	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878331	87872088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_87872397_87874697
Isoform_64571_7	chr7	-	3865	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-398	317	-398	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9686	False	NA	NA	False	NA	NA	NA	25454580	25420906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_64572_23	chr7	-	3666	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-201	319	-201	-2	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGAGTCGTGGTAG	9883	False	NA	NA	False	NA	NA	NA	25454383	25420908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_64575_12	chr7	-	3984	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-201	1	-201	-1	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCAGGGTTGAAACCC	9883	False	NA	-29	True	AATAAA	-24	NA	25454383	25420590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
Isoform_6458_89	chr11	-	2441	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	28	7	28	-7	multi-exon	FALSE	canonical	3	615	junction_2	8	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87878331	87870357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_87872397_87874697_87874837_87878068
Isoform_64580_5	chr7	-	3561	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-208	1	-201	-1	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9883	False	NA	NA	False	NA	NA	NA	25454383	25420907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
Isoform_64581_9	chr7	-	3387	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-33	0	-26	0	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9516	False	NA	NA	False	NA	NA	NA	25454208	25420906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
Isoform_64584_6	chr7	-	3725	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-57	-314	-50	-3	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGCAGGGTTGAAAC	9492	False	NA	-31	True	AATAAA	-22	NA	25454232	25420592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
Isoform_64587_25	chr7	-	2644	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	102	-1	7	1	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGACCCCCTCTGCCTGTG	1706	False	NA	-5	True	AATAAA	-19	NA	25515976	25501898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
Isoform_6459_95	chr11	-	710	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	28	1738	28	-1108	multi-exon	FALSE	canonical	3	615	junction_2	8	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878331	87872088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_87872397_87874697_87874837_87878068
Isoform_64593_78	chr7	-	2091	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	-5	-330	-5	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26865843	26858082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
Isoform_64594_23	chr7	-	2124	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	-38	-330	-38	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26865876	26858082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
Isoform_64595_1179	chr7	-	2063	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	44	0	44	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866183	26858082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
Isoform_64596_16	chr7	-	2779	12	Fusion	ENSMUSG00000053291.16_ENSMUSG00000058709.12	novel	2107	6	NA	NA	0	0	multi-exon	FALSE	canonical	2	7	junction_5	201.262995576509	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26878301	26858082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_6460_7	chr11	-	2416	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44279	-7	intron_retention	FALSE	canonical	3	52	junction_2	289.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87922638	87870357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_87872397_87874697_87874837_87922400
Isoform_64603_285	chr7	-	1171	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	20	1	0	-1	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878301	26867849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_64604_25	chr7	-	1213	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	-22	1	-22	-1	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878343	26867849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
Isoform_64605_5	chr7	-	1089	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26878301	26867850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
Isoform_64606_5	chr7	-	1437	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	-63	-2	-2	-1	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878303	26867849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
Isoform_64607_30	chr7	-	570	4	FSM	ENSMUSG00000089661.10	ENSMUST00000121848.2	572	4	0	2	0	-2	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTTGTCTCTTTGGTT	NA	False	NA	-4	True	AATACA	-14	NA	26880582	26879170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
Isoform_64609_221	chr7	-	1267	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	20	1	20	-1	multi-exon	FALSE	canonical	3	2141	junction_5	100.882902416614	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTGTCTGCTTTA	NA	False	NA	-9	True	ATTAAA	-25	NA	26895165	26886432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
Isoform_6461_7	chr11	-	704	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44298	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	289.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87922657	87872088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_87872397_87874697_87874837_87922400
Isoform_64616_1164	chr7	-	1240	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	126	-1	8	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895570	26886430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
Isoform_64619_639	chr7	-	1237	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	100	-1	8	1	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895570	26886430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
Isoform_6462_6	chr11	-	2628	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44310	-7	intron_retention	FALSE	canonical	3	7	junction_2	286.479008344804	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGCTGTTGGGGTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	87922669	87870357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_87872397_87874697_87874837_87892657_87892839_87922400
Isoform_64623_85	chr7	-	3227	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	13	7	13	-7	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACATTGTGGGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	26928040	26906603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
Isoform_64630_60	chr7	-	4037	24	ISM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	5341	3	5291	-1	3prime_fragment	FALSE	canonical	3	305	junction_13	106.170387720557	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027747	27004567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
Isoform_64631_58	chr7	-	5090	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	27	1	12	-1	multi-exon	FALSE	canonical	3	195	junction_24	119.840530186521	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27033061	27004565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
Isoform_64632_9	chr7	-	5363	33	FSM	ENSMUSG00000040488.19	ENSMUST00000038618.13	5386	33	18	5	18	-1	multi-exon	FALSE	canonical	3	26	junction_32	158.898146917294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27037099	27004565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
Isoform_64633_5	chr7	-	4133	23	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5283	0	intron_retention	FALSE	canonical	3	305	junction_13	106.662865806938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027755	27004566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
Isoform_64634_3	chr7	-	4931	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	9	junction_8	139.296789852693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTCGGCCTCTGCCTG	NA	False	NA	-10	True	ATTAAA	-12	NA	27033052	27004568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
Isoform_64635_22	chr7	-	2302	18	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	81.6590938748205	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055394	27041560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27041970_27042070_27042183_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_64638_7	chr7	-	2290	17	ISM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	309	3	33	1	3prime_fragment	FALSE	canonical	3	272	junction_5	30.5848588970098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055135	27041560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997
Isoform_64640_471	chr7	-	2301	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	54	3	-11	1	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055390	27041560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_64642_10	chr7	-	2458	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	20	-1	intron_retention	FALSE	canonical	3	272	junction_5	30.165623543199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACTGTTTATAGTCTT	NA	False	NA	-34	True	AATAAA	-11	NA	27055424	27041563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
Isoform_64645_20	chr7	-	2134	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27055394	27041560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
Isoform_64647_4	chr7	-	2060	6	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	30024	3	30024	1	3prime_fragment	FALSE	canonical	3	20	junction_4	7.70973410695855	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGCTGGTTTGTTCGT	NA	False	NA	-3	True	AATAAA	-17	NA	27063907	27055810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495
Isoform_64651_435	chr7	-	2106	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	171	5	-25	-5	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252466	27231429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
Isoform_64653_11	chr7	-	2211	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	63	8	2	-8	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGAGTGGTATGAGAT	NA	False	NA	-7	True	AGTAAA	-23	NA	27252574	27231432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
Isoform_64654_19	chr7	-	2127	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-26	-8	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGAGTGGTATGAGAT	NA	False	NA	-7	True	AGTAAA	-23	NA	27252467	27231432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
Isoform_64655_44	chr7	-	2029	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-23	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGGTATGAGATGGT	NA	False	NA	-4	True	AGTAAA	-26	NA	27252464	27231429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
Isoform_64657_14	chr7	-	3676	10	FSM	ENSMUSG00000040390.14	ENSMUST00000036453.14	3682	10	5	1	5	-1	multi-exon	FALSE	canonical	0	0	junction_3	25.4209012865835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTGTGTGTGCGTC	NA	False	NA	-1	True	ATTAAA	-22	NA	27374014	27355800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27356412_27357276_27357958_27358254_27358368_27358445_27358600_27360959_27361077_27362649_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
Isoform_64658_8	chr7	-	1978	4	ISM	ENSMUSG00000040390.14	ENSMUST00000108341.2	3403	11	10	7508	6	8	5prime_fragment	FALSE	canonical	3	11	junction_2	33.0891052899423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACAGACT	NA	False	NA	NA	False	ATTAAA	-10	NA	27374013	27363596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_27363999_27364374_27364524_27367773_27367955_27372767
Isoform_64659_7	chr7	-	1848	3	NIC	ENSMUSG00000040390.14	novel	3403	11	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	40.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACAGACT	NA	False	NA	NA	False	ATTAAA	-10	NA	27374032	27363596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27363999_27367773_27367955_27372767
Isoform_64660_37	chr7	-	1613	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-27	35	-10	-35	multi-exon	FALSE	canonical	3	84	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATGTTAGCACTAAAG	NA	False	NA	-35	True	AATAAA	-14	NA	27374033	27367607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27367955_27372767
Isoform_64661_3	chr7	-	2857	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-42	-1194	-25	1194	multi-exon	FALSE	canonical	3	84	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	27374048	27366378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27367955_27372767
Isoform_64664_7	chr7	-	529	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-13	-2089	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCATAAAGCAATTAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	27678609	27664221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
Isoform_64665_3	chr7	-	3987	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-43	2219	-43	1639	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTTGAATTGTGAGTC	NA	False	NA	-14	True	AATAAA	-14	NA	27713583	27686497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
Isoform_64667_572	chr7	-	1394	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	45	1	0	-1	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTCTTAGGTGTTTAA	NA	False	NA	-5	True	AATAAA	-23	NA	27749481	27741132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
Isoform_64670_7	chr7	-	2396	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	45	-1001	0	1001	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGTGCTAATTTTTC	NA	False	NA	NA	False	NA	NA	NA	27749481	27740130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
Isoform_64671_7	chr7	-	1536	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTCTTAGGTGTTTAA	NA	False	NA	-5	True	AATAAA	-23	NA	27749481	27741132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
Isoform_64675_410	chr7	-	1495	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	18	2	2	-2	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	2674	False	NA	-3	True	AATAAA	-44	NA	28011479	28004942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
Isoform_64676_467	chr7	-	1181	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	27	307	-8	1	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGTGTCCAGAGTCCA	2683	False	NA	-1	True	AATAAA	-20	NA	28011470	28005247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
Isoform_64687_8	chr7	-	3760	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	-4	-1	-4	1	multi-exon	FALSE	canonical	3	668	junction_13	69.0304945924152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038135	28014321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
Isoform_64688_418	chr7	-	3546	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	-36	3	-9	1	multi-exon	FALSE	canonical	3	628	junction_29	71.450522531579	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038180	28014321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
Isoform_64689_21	chr7	-	3474	28	NIC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	270	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_25	154.18548322495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28037861	28014321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776
Isoform_64693_13	chr7	-	1793	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	6671	False	NA	-1	True	AATAAA	-19	NA	28078680	28076207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28077919_28078598
Isoform_64694_19	chr7	-	2161	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	34	-914	34	914	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTTCCTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	28092099	28084656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
Isoform_64695_196	chr7	-	650	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	38	593	38	-593	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTGGTTCCTGTTGC	NA	False	NA	-22	True	AATGAA	-16	NA	28092095	28086163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
Isoform_64696_20	chr7	-	754	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	39	-593	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGGTGGTTCCTGTTGC	NA	False	NA	-22	True	AATGAA	-16	NA	28092094	28086163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
Isoform_64697_81	chr7	-	3717	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-103	777	-67	-750	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACCAAAAAAAA	6533	False	NA	NA	False	ATTAAA	-18	NA	28135719	28099723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
Isoform_64698_55	chr7	-	3941	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-85	-750	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACCAAAAAAAA	6515	False	NA	NA	False	ATTAAA	-18	NA	28135737	28099723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
Isoform_647_108	chr10	-	1153	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-27	6	15	-6	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCCATCATTCTTGC	NA	False	NA	-5	True	AATAAA	-15	NA	7539052	7513499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
Isoform_64701_126	chr7	-	3009	11	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_9	227.845759231986	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4626	False	NA	-5	True	ATTAAA	-19	NA	28297580	28258245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28297459
Isoform_64702_35	chr7	-	3054	11	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	113	junction_9	227.845759231986	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTATGTGTGT	4580	False	NA	-6	True	ATTAAA	-18	NA	28297626	28258246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28297459
Isoform_64704_702	chr7	-	2869	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	30	0	0	0	multi-exon	TRUE	canonical	3	622	junction_9	35.4843036069349	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4626	False	NA	-3	True	ATTAAA	-21	NA	28297580	28258243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
Isoform_64705_24	chr7	-	2920	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	-24	3	-24	-1	multi-exon	FALSE	canonical	3	622	junction_9	35.4843036069349	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTATGTGTGT	4572	False	NA	-6	True	ATTAAA	-18	NA	28297634	28258246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
Isoform_64710_84	chr7	-	878	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	3	2	3	-1	multi-exon	FALSE	canonical	3	939	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCAGTGTGCGGTGTCTG	1697	False	NA	-7	True	AATAAA	-22	NA	28441192	28439067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28439665_28440911
Isoform_64712_250	chr7	-	703	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	18	1	18	-1	multi-exon	FALSE	canonical	3	503	junction_2	218	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCAGTGTGCGGTGTCTG	1662	False	NA	-7	True	AATAAA	-22	NA	28441227	28439067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28439665_28440911_28440980_28441189
Isoform_64714_272	chr7	-	1196	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	36	11	36	-11	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGACTGACCCTGCCTT	NA	False	NA	-10	True	AATAAA	-22	NA	28465903	28458467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
Isoform_64716_4	chr7	-	1371	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	-144	16	-18	-16	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCCCAGACTGACCCT	NA	False	NA	-15	True	AATAAA	-17	NA	28466083	28458472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
Isoform_64727_550	chr7	-	3413	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-57	1	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AAAACA	-38	NA	28661705	28593076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_64728_105	chr7	-	3432	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	28	-10	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCATTTAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	28661737	28593089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_64732_1485	chr7	-	3414	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	59	404	-58	1	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AAAACA	-38	NA	28661706	28593076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_64733_147	chr7	-	3467	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	6	404	6	1	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AAAACA	-38	NA	28661759	28593076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_64735_28	chr7	-	3819	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	51	7	51	-7	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACTCTGGTGTCATC	NA	False	NA	-8	True	AATAAA	-17	NA	28661714	28592679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
Isoform_6474_415	chr11	-	3690	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	67	1	67	-1	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGTCCATTTTTTCT	NA	False	NA	91	True	TATAAA	-6	NA	88755345	88721618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_64743_30	chr7	-	883	8	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	1203.94528318274	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681223	28670796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679743_28679968_28681098
Isoform_64744_1436	chr7	-	757	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	16	1	7	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681223	28670797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_64745_121	chr7	-	835	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-62	1	-12	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681301	28670797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_64746_18	chr7	-	881	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-106	-1	-56	1	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTCTCTTGCCTGTAC	NA	False	NA	-3	True	AATAAA	-18	NA	28681345	28670795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
Isoform_64748_7	chr7	-	2282	17	ISM	ENSMUSG00000030592.19	ENSMUST00000214374.2	15300	109	45202	65694	-7736	-39	internal_fragment	FALSE	canonical	1	2	junction_1	2.54644359843292	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAACAAGAAA	2119	False	NA	NA	False	NA	NA	NA	28779238	28768462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28777943_28778218_28779184
Isoform_64749_3	chr7	-	1337	7	FSM	ENSMUSG00000030590.16	ENSMUST00000123545.8	1359	7	22	0	2	0	multi-exon	FALSE	canonical	3	257	junction_3	25.8698666405531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855606	28851936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309
Isoform_64751_130	chr7	-	1280	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	11	2	11	0	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855648	28851936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_64752_8	chr7	-	1190	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	5	0	intron_retention	TRUE	canonical	3	18	junction_6	105.086868827651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855603	28851934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855455
Isoform_64753_4	chr7	-	1342	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	257	junction_3	24.5877114745467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855635	28851936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
Isoform_64754_4	chr7	-	1556	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	257	junction_3	25.0493956458479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGATCTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-18	NA	28855608	28851937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
Isoform_64755_11	chr7	-	1147	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	35	junction_2	99.9762471790175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855630	28851934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28852915_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_64756_3	chr7	-	2343	5	ISM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	1	-1	1	1	intron_retention	FALSE	canonical	3	257	junction_2	27.0739727413618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855607	28851935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099
Isoform_64757_35	chr7	-	2167	7	FSM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	4	-2	4	0	multi-exon	FALSE	canonical	3	257	junction_2	24.4386988196999	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855604	28851934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
Isoform_64759_6	chr7	-	2252	6	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	257	junction_2	24.6121921006643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855614	28851934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
Isoform_6476_60	chr11	-	3663	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	-15	110	-15	-110	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGCAGTGGTGTTGAC	NA	False	NA	-18	True	NA	NA	NA	88755427	88721727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_64760_7	chr7	-	2513	6	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	257	junction_2	26.1717404847289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855635	28851936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
Isoform_64761_9	chr7	-	2568	5	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	257	junction_2	27.2213151776324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855615	28851936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855456_28855554
Isoform_64765_280	chr7	-	1319	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	73	-1	2	1	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTATCCAGTCTGG	NA	False	NA	-9	True	AATAAA	-16	NA	28879904	28873611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
Isoform_64769_33	chr7	-	1161	8	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	134	-5	at_least_one_novel_splicesite	FALSE	non_canonical	3	425	junction_1	479.284798806875	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATATGAGTGTATCCA	NA	False	NA	-15	True	AATAAA	-10	NA	28879772	28873617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_28873786_28873805_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
Isoform_6477_55	chr11	-	3755	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	2	1	2	-1	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGTCCATTTTTTCT	NA	False	NA	91	True	TATAAA	-6	NA	88755410	88721618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
Isoform_64778_11	chr7	-	386	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	79	1001	-49	10	multi-exon	FALSE	canonical	3	53	junction_3	7.36357401145817	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCTCTGCCGGTCAGAA	1862	False	NA	-1	True	ATTAAA	-24	NA	28947812	28946986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
Isoform_64780_15	chr7	-	1014	7	FSM	ENSMUSG00000074227.13	ENSMUST00000207601.2	1304	7	264	26	262	-8	multi-exon	FALSE	canonical	0	0	junction_2	472.77185007382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	731	False	NA	-24	True	AATAAA	-13	NA	28981073	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
Isoform_64782_32	chr7	-	1134	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	242	8	240	-8	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	709	False	NA	-24	True	AATAAA	-13	NA	28981095	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
Isoform_64783_10	chr7	-	1449	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	-73	8	-73	-8	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	394	False	NA	-24	True	AATAAA	-13	NA	28981410	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
Isoform_64786_228	chr7	-	1222	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-19	8	-17	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	450	False	NA	-24	True	AATAAA	-13	NA	28981354	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_64788_115	chr7	-	1278	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-75	8	-73	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	394	False	NA	-24	True	AATAAA	-13	NA	28981410	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_64789_32	chr7	-	1351	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-148	8	-146	-8	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	321	False	NA	-24	True	AATAAA	-13	NA	28981483	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_64797_14	chr7	-	2278	5	NIC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	255	-8	intron_retention	FALSE	canonical	0	0	junction_1	445.694612374886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTACTATGTAG	724	False	NA	-24	True	AATAAA	-13	NA	28981080	28955773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
Isoform_64798_10	chr7	-	2792	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	-28	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3416	False	NA	-4	True	AATAAA	-21	NA	29553101	29543360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
Isoform_64799_8	chr7	-	3435	5	NIC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	-24	-106	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	18.1245689603919	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAAGTGTACCTGGCC	NA	False	NA	NA	False	AGTAAA	-18	NA	29605553	29592863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605478
Isoform_6480_23	chr11	-	2882	2	ISM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	67	12315	67	-4135	5prime_fragment	FALSE	canonical	3	913	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAAACCAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	88755345	88733932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_88736692_88755222
Isoform_64801_7	chr7	-	3725	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	-5	-109	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACTTGAAAGTGTACCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	29606002	29592866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
Isoform_64806_4	chr7	-	2874	5	FSM	ENSMUSG00000059975.16	ENSMUST00000108205.9	3711	5	0	837	0	614	multi-exon	FALSE	canonical	3	25	junction_4	11.8848643240047	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAACAGTTTTTAACA	NA	False	NA	NA	False	AATACA	-19	NA	29651318	29633052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138
Isoform_64810_16	chr7	-	2164	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	19	-2	19	1	multi-exon	FALSE	canonical	2	6	junction_6	14.682756326158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTCCACTGTGTCCCA	NA	False	NA	NA	False	ATTAAA	-17	NA	29772306	29755459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
Isoform_64811_3	chr7	-	2386	9	FSM	ENSMUSG00000058447.9	ENSMUST00000182746.2	2374	9	-17	5	-17	-5	multi-exon	FALSE	canonical	3	5	junction_6	43.1955943934101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGTGTTCCACTGTGT	9873	False	NA	NA	False	ATTAAA	-13	NA	29789852	29755463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29780515_29780643_29786524_29786585_29789712
Isoform_64812_6	chr7	-	2063	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	29772318	29755461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
Isoform_64813_3	chr7	-	2273	8	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-19	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	44.1093261460796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATAATGTGTTCCACT	9871	False	NA	NA	False	ATTAAA	-9	NA	29789854	29755467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29780515_29780643_29786524_29786585_29789712
Isoform_64814_17	chr7	-	1696	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	11	2	11	-2	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTGTGGCAGTGT	9934	False	NA	0	True	AAAACA	-20	NA	29789941	29776763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
Isoform_64816_4	chr7	-	1936	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	-2	-225	-2	225	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTGCTGTATTCTTA	9921	False	NA	NA	False	NA	NA	NA	29789954	29776536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
Isoform_64817_11	chr7	-	2831	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	-22	-780	1	780	multi-exon	FALSE	canonical	3	29	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869174	29859913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29862654_29869083
Isoform_64818_5	chr7	-	2950	2	NIC	ENSMUSG00000037029.9	novel	585	3	NA	NA	4	780	intron_retention	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869148	29859913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29862799_29869083
Isoform_64821_59	chr7	-	1288	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	-55	8	-55	-1	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTAACTTGGTTATT	NA	False	NA	-10	True	NA	NA	NA	29892452	29886368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
Isoform_64822_64	chr7	-	1234	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	5	2	5	-2	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGTTATTTTTTTA	NA	False	NA	-4	True	NA	NA	NA	29892392	29886362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
Isoform_64823_9	chr7	-	1243	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	4	-55	4	1	multi-exon	FALSE	canonical	3	41	junction_9	490.288577155219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTATTTTTTTAATG	NA	False	NA	-1	True	NA	NA	NA	29892527	29886359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
Isoform_64830_629	chr7	-	1436	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-6	-1	-6	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	False	NA	-8	True	NA	NA	NA	29894479	29886366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
Isoform_64832_32	chr7	-	1542	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-114	1	-114	-1	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTAACTTGGTTATT	NA	False	NA	-10	True	NA	NA	NA	29894587	29886368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
Isoform_64833_10	chr7	-	1630	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	-28	-2	-28	2	multi-exon	FALSE	canonical	3	37	junction_11	486.143841584714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTTGGTTATTTTTT	8281	False	NA	-6	True	NA	NA	NA	29898264	29886364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
Isoform_64834_18	chr7	-	1226	10	NNC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_9	479.120258622219	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTATTTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	29892526	29886361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892468
Isoform_64838_798	chr7	-	907	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	503	6	503	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	False	NA	-11	True	NA	NA	NA	29931194	29923561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
Isoform_6485_1981	chr11	-	2039	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	57	1	57	-1	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGCTGAAAATTCTGT	5258	False	NA	-10	True	AATAAA	-19	NA	88846234	88814846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
Isoform_64851_22	chr7	-	4712	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-3	-1	combination_of_known_junctions	TRUE	canonical	1	41	junction_22	30.5222607032556	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979824	29939563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_64853_3	chr7	-	4583	32	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_10	39.0660477577263	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979765	29939567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_64854_12	chr7	-	4776	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	36.4423774608628	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979831	29939563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_64856_4	chr7	-	2582	13	ISM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	9	14931	9	-5247	5prime_fragment	FALSE	canonical	1	41	junction_2	40.4621736934634	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-17	NA	29979835	29954493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
Isoform_64857_5	chr7	-	3212	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	-327	1	-327	-1	multi-exon	FALSE	canonical	3	10	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCGGGCTGTTCCTTTGC	NA	False	NA	NA	False	AAGAAA	-15	NA	30062524	30054914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30055529_30058808_30060240_30061357
Isoform_64858_13	chr7	-	949	6	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	8466	-6	-20	0	3prime_fragment	FALSE	canonical	3	430	junction_4	31.3496411462715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30136448	30134406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211
Isoform_64859_466	chr7	-	2378	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-35	0	-35	0	multi-exon	TRUE	canonical	3	317	junction_16	59.4064390449386	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30144995	30134406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
Isoform_6486_34	chr11	-	2088	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	8	1	8	-1	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGCTGAAAATTCTGT	5209	False	NA	-10	True	AATAAA	-19	NA	88846283	88814846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
Isoform_64860_7	chr7	-	2355	15	FSM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	458	539	458	-4	multi-exon	FALSE	canonical	3	10	junction_12	10.266102334521	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGTTGTCCAGATT	NA	False	NA	-3	True	NA	NA	NA	30156482	30147499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
Isoform_64861_101	chr7	-	999	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	1	-2	1	2	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4886	False	NA	-4	True	NA	NA	NA	30259070	30254863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
Isoform_64862_15	chr7	-	1118	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	194	0	2	0	multi-exon	FALSE	canonical	3	52	junction_8	74.6976196073208	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACAAATCTCAAGTGCA	4887	False	NA	-10	True	NA	NA	NA	30259069	30254869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
Isoform_64866_3	chr7	-	609	4	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	46	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	381.68660792156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGAGTTCTTGGGATC	1336	False	NA	-7	True	AATAAA	-15	NA	30262620	30261291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30261560_30261748_30261854_30262220_30262313_30262476
Isoform_64867_148	chr7	-	660	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	46	2	46	-2	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGAGTTCTTGGGATC	1336	False	NA	-7	True	AATAAA	-15	NA	30262620	30261291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
Isoform_64868_25	chr7	-	689	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	15	4	15	-4	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTGAGTTCTTGGGA	1305	False	NA	-9	True	AATAAA	-13	NA	30262651	30261293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
Isoform_64869_4	chr7	-	1775	6	FSM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	31.6771210813104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30292367	30289105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30292336
Isoform_64870_24	chr7	-	1896	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298356	30289105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
Isoform_64872_12	chr7	-	955	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298324	30289105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
Isoform_64873_4	chr7	-	2058	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	42	junction_4	17.5267652463311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGACGAGTCCAGACTTT	NA	False	NA	-3	True	AATAAA	-17	NA	30298334	30289108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30291391_30298204
Isoform_64874_5	chr7	-	742	3	ISM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	7687	-7	7687	7	3prime_fragment	FALSE	canonical	3	31	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGTTCTGTTCT	9594	False	NA	-1	True	AATAAA	-17	NA	30304585	30302509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_30303068_30303196_30303281_30304485
Isoform_64875_3	chr7	-	1204	6	NNC	ENSMUSG00000006313.6	novel	1421	8	NA	NA	5029	8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	12.5698050899765	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGTTCTGTTCTG	6936	False	NA	0	True	AATAAA	-18	NA	30307243	30302508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30307045
Isoform_64878_1514	chr7	-	468	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	37	113	0	0	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	-4	True	AATAAA	-18	NA	30325539	30316398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
Isoform_64879_45	chr7	-	509	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	-10	119	-10	-6	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCACATTGTGTGTA	NA	False	NA	-10	True	AATAAA	-12	NA	30325586	30316404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
Isoform_64880_8	chr7	-	514	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	1067	-9	1067	9	3prime_fragment	FALSE	canonical	3	44	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCGTGTCTGGTGTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	30334210	30333031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_30333260_30333413_30333527_30334037
Isoform_64883_159	chr7	-	1556	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-32	2	-32	0	multi-exon	FALSE	canonical	3	345	junction_5	209.790818435889	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3752	False	NA	-14	True	AATAAA	-16	NA	30349601	30340425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_64885_199	chr7	-	1514	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	7	5	7	-3	multi-exon	FALSE	canonical	3	345	junction_5	209.790818435889	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCTGACTGGACTTAG	3791	False	NA	-17	True	AATAAA	-13	NA	30349562	30340428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_64887_463	chr7	-	1604	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	180	0	7	0	multi-exon	TRUE	canonical	3	640	junction_5	133.345925331332	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3791	False	NA	-14	True	AATAAA	-16	NA	30349562	30340425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_64888_179	chr7	-	1640	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	144	0	-29	0	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3755	False	NA	-14	True	AATAAA	-16	NA	30349598	30340425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
Isoform_64894_408	chr7	-	2142	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	44	1	10	-1	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364375	30353141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_64895_359	chr7	-	2184	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	2	1	2	-1	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364417	30353141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_64896_32	chr7	-	2329	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	10	-1	intron_retention	FALSE	canonical	3	112	junction_12	35.9706724062312	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364375	30353141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_64898_30	chr7	-	2239	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	6	-1	intron_retention	FALSE	canonical	3	112	junction_12	35.877241680322	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364379	30353141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_64899_20	chr7	-	2460	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	6	-1	intron_retention	FALSE	canonical	3	112	junction_11	36.9805164072921	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCACTGCCCAGTTT	NA	False	NA	-10	True	AATAAA	-9	NA	30364413	30353141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
Isoform_64903_3	chr7	-	923	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	-197	1	4	0	multi-exon	FALSE	canonical	3	791	junction_1	3.48711915483254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATGTCCATCTCTC	9279	False	NA	-13	True	AGTAAA	-17	NA	30428943	30427126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
Isoform_64905_166	chr7	-	847	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	27	-4	-4	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	-12	True	AGTAAA	-18	NA	30428938	30427125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
Isoform_64906_3	chr7	-	1028	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	-160	2	-160	-2	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTATGTCCAT	9097	False	NA	-18	True	AGTAAA	-12	NA	30429125	30427131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
Isoform_64908_12	chr7	-	1643	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-16	-2	-16	2	multi-exon	FALSE	canonical	3	35	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAATAATGTTTCCT	7650	False	NA	NA	False	AATAAA	-15	NA	30555619	30553752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30555330_30555553
Isoform_64909_3	chr7	-	1176	4	ISM	ENSMUSG00000030577.15	ENSMUST00000189718.7	3672	13	10528	2	5498	-2	3prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCCTTTGTATTGGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	30567346	30565255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_30566088_30566442_30566528_30566886_30567006_30567206
Isoform_64910_15	chr7	-	1731	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-60	748	-60	578	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	8704	False	NA	-8	True	AATAAA	-22	NA	30656288	30645420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_64911_3	chr7	-	2476	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-82	25	-82	-21	multi-exon	TRUE	canonical	3	69	junction_9	26.650458036969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACTTAAAAAAAAAA	8682	False	NA	NA	False	NA	NA	NA	30656310	30644697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_64912_3	chr7	-	1979	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-307	747	-307	579	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGTGTGTCCATGT	8457	False	NA	-7	True	AATAAA	-23	NA	30656535	30645419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_64914_3	chr7	-	1843	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-173	749	-173	577	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTCTGTGTGTCCAT	8591	False	NA	-9	True	AATAAA	-21	NA	30656401	30645421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
Isoform_64916_127	chr7	-	2130	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	34	3	-3	-1	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAAGCCTCTTGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	30672855	30657202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
Isoform_64917_7	chr7	-	2218	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	-54	3	-54	-1	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAAGCCTCTTGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	30672943	30657202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
Isoform_64918_146	chr7	-	2059	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	11	1	-1	-1	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAAGCCTCTTGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	30672841	30657202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
Isoform_64919_8	chr7	-	2129	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	-58	0	-21	0	multi-exon	TRUE	canonical	3	93	junction_6	34.291945118351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAAGCCTCTTGTTTTG	NA	False	NA	-5	True	AATAAA	-15	NA	30672910	30657201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
Isoform_64922_12	chr7	-	1827	14	FSM	ENSMUSG00000001249.15	ENSMUST00000108102.9	1830	14	-4	7	-4	1	multi-exon	FALSE	canonical	2	5	junction_11	2.8658363092611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGTCTCTGCGTCTAC	9108	False	NA	NA	False	AATAAA	-13	NA	30814719	30798156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30810138_30810199_30814102_30814170_30814560
Isoform_64923_5	chr7	-	1766	13	FSM	ENSMUSG00000001249.15	ENSMUST00000168884.8	1762	13	-9	5	-1	-1	multi-exon	TRUE	canonical	2	2	junction_11	3.2945662334618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTCTGCGTCTACAA	9111	False	NA	NA	False	AATAAA	-15	NA	30814716	30798154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30814102_30814170_30814560
Isoform_64924_17	chr7	-	1581	6	FSM	ENSMUSG00000019194.16	ENSMUST00000098548.8	1573	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	16	junction_5	3.38230690505755	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	-1	True	AATAAA	-16	NA	30826436	30815948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
Isoform_64925_9	chr7	-	1643	5	FSM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	-141	-1	18	1	multi-exon	FALSE	canonical	3	16	junction_4	3.69966214673719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTATTCTCTCATTAACA	NA	False	NA	0	True	AATAAA	-17	NA	30826410	30815947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
Isoform_64928_10	chr7	-	2719	19	FSM	ENSMUSG00000001248.16	ENSMUST00000186634.7	2735	19	14	2	-5	-2	multi-exon	FALSE	canonical	3	18	junction_6	68.1079390234699	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	5749	False	NA	-3	True	AATAAA	-13	NA	30850444	30829553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_64929_12	chr7	-	2836	19	NIC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	86.2625192202397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4693	False	NA	-1	True	AATAAA	-15	NA	30851500	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_6493_4	chr11	-	841	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	-24	2	-10	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGCTCTCGCGTCATA	6795	False	NA	-2	True	AATAAA	-24	NA	88857767	88855485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88856100_88857540
Isoform_64930_180	chr7	-	2656	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	57	0	8	0	multi-exon	FALSE	canonical	3	173	junction_6	41.078853711152	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5743	False	NA	-1	True	AATAAA	-15	NA	30850450	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_64931_32	chr7	-	2787	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	-74	0	-74	0	multi-exon	FALSE	canonical	3	173	junction_6	41.078853711152	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5612	False	NA	-1	True	AATAAA	-15	NA	30850581	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_64934_39	chr7	-	2765	19	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_18	68.1823308996809	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4693	False	NA	-1	True	AATAAA	-15	NA	30851500	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_64935_69	chr7	-	2848	20	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	3	45	junction_19	77.4223227918279	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	889	False	NA	-3	True	AATAAA	-13	NA	30855304	30829553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_64936_13	chr7	-	2938	20	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_19	77.4223227918279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	801	False	NA	-1	True	AATAAA	-15	NA	30855392	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_64939_13	chr7	-	2576	19	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	69.7096270163988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5712	False	NA	-1	True	AATAAA	-15	NA	30850481	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835132_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_64942_30	chr7	-	3757	18	FSM	ENSMUSG00000001248.16	ENSMUST00000185985.7	3722	18	-35	0	-14	0	multi-exon	FALSE	canonical	3	189	junction_17	34.4459860006517	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5721	False	NA	-1	True	AATAAA	-15	NA	30850472	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
Isoform_64943_10	chr7	-	3856	18	NIC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	23	junction_17	66.5549178755831	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4681	False	NA	-1	True	AATAAA	-15	NA	30851512	30829551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
Isoform_64944_6	chr7	-	3947	19	NIC	ENSMUSG00000001248.16	novel	3810	19	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	45	junction_18	77.190101233222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	869	False	NA	-3	True	AATAAA	-13	NA	30855324	30829553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
Isoform_64945_3	chr7	-	1263	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	689	10	239	-10	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTTGGACCATGGTG	NA	False	NA	-12	True	AATATA	-10	NA	33832004	33808977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
Isoform_64946_54	chr7	-	2608	18	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	585.006840524286	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCTGTTGCCCTAGTG	NA	False	NA	-5	True	AATAAA	-22	NA	33867984	33840117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_33840892_33841227_33841278_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_6495_6	chr11	-	4841	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-21	388	-21	-388	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTGTTAA	3811	False	NA	-5	True	AATAAA	-36	NA	88951595	88928795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
Isoform_64954_3390	chr7	-	2549	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	24	6	24	-6	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	3390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	-6	True	AATAAA	-21	NA	33867976	33840118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_64955_54	chr7	-	2586	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	-13	6	-13	-6	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	-6	True	AATAAA	-21	NA	33868013	33840118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
Isoform_6496_7	chr11	-	4693	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-36	551	-36	-551	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGGGATTTTTATTTG	3796	False	NA	0	True	AGTAAA	-15	NA	88951610	88928958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
Isoform_64970_493	chr7	-	1160	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-1	136	-1	-2	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATATGTGTTTACCTT	5731	False	NA	NA	False	ATTAAA	-18	NA	33896087	33884059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_64972_9	chr7	-	1291	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	11	-7	11	7	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATTGTTCATTTTCTT	5743	False	NA	1	True	TATAAA	-22	NA	33896075	33883916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_64976_30	chr7	-	992	6	FSM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-35	2	18	-2	multi-exon	TRUE	canonical	3	50	junction_1	296.710903068964	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATATGTGTTTACCTT	5750	False	NA	NA	False	ATTAAA	-18	NA	33896068	33884059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33884237_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_64977_13	chr7	-	1633	5	ISM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-54	3917	-1	565	5prime_fragment	FALSE	canonical	3	753	junction_1	24.5089269450949	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAACAA	5731	False	NA	NA	False	NA	NA	NA	33896087	33887974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
Isoform_64989_3964	chr7	-	2037	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	49	798	2	31	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	3964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTACTTTTATCTGTTAC	NA	False	NA	-10	True	GGGGCT	-22	NA	33929712	33901552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
Isoform_6499_3	chr11	-	1229	3	ISM	ENSMUSG00000000276.12	ENSMUST00000152772.2	3562	11	2	13074	2	-13074	5prime_fragment	FALSE	canonical	3	69	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAACAAAAATGATAT	3834	False	NA	NA	False	TATAAA	-23	NA	88951572	88943119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_88943373_88946183_88946344_88950756
Isoform_64991_86	chr7	-	2071	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	14	799	14	30	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTACTTTTATCTGTTA	NA	False	NA	-11	True	GGGGCT	-21	NA	33929747	33901553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
Isoform_64999_3	chr7	-	2140	4	ISM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	43096	865	2613	1	3prime_fragment	FALSE	canonical	3	151	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCCCTATGTA	3160	False	NA	NA	False	GATAAA	-20	NA	33941928	33937003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664
Isoform_65_32	ERCC-00078	+	976	1	FSM	ERCC-00078A	DQ883673	977	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00078_+_0_1000
Isoform_650_9	chr10	-	1516	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	33	8	7	1	multi-exon	TRUE	canonical	3	22	junction_3	111.32321026119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATTGCTTTATTTT	7496	False	NA	-9	True	AATAAA	-9	NA	7656648	7643718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
Isoform_6500_26	chr11	-	1941	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	28	754	28	-754	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTCTCCCTCTTACC	NA	False	NA	-3	True	AATAAA	-23	NA	89893692	89874244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
Isoform_65000_5	chr7	-	5329	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	14	881	8	-8	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATACCAAAAAAAAAAAT	9822	False	NA	NA	False	GATAAA	-11	NA	34012962	33937012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
Isoform_65001_163	chr7	-	2353	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-6	597	-6	472	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACGTGTCCTTGCAGA	NA	False	NA	-3	True	AATAAA	-17	NA	34089118	34044667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_65004_148	chr7	-	2958	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-6	-8	-6	8	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTTGGTTTTTGTTAA	NA	False	NA	-3	True	AATAAA	-41	NA	34089118	34044062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_6501_24	chr11	-	2533	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	9	3443	1	-3443	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	90528901	90370760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
Isoform_65014_6	chr7	-	2223	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	64	469	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACATACGTGTCCTTGC	NA	False	NA	-6	True	AATAAA	-14	NA	34089048	34044670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
Isoform_65018_19	chr7	-	2390	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	8	9	-1	-4	multi-exon	TRUE	canonical	3	15	junction_6	8.78761755097605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAAGACTGAGGCTCC	6807	False	NA	-20	True	CATAAA	-11	NA	34353815	34338447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
Isoform_65019_6	chr7	-	2314	7	NNC	ENSMUSG00000030499.10	novel	2407	7	NA	NA	279	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.6065752079239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAAGACTGAGGCTCC	5967	False	NA	-20	True	CATAAA	-11	NA	34354655	34338447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354587
Isoform_6502_111	chr11	-	2054	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	29	2225	1	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578404	90536515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
Isoform_65020_44	chr7	-	2080	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-2	294	-2	-3	multi-exon	FALSE	canonical	1	5	junction_3	4.02768199119819	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGTCTACTCCAGG	NA	False	NA	-2	True	AATAAA	-17	NA	34512113	34374186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_65021_4	chr7	-	2301	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-220	291	-195	0	multi-exon	TRUE	canonical	1	5	junction_3	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTCTACTCCAGGCTG	NA	False	NA	1	True	AATAAA	-20	NA	34512331	34374183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_65022_7	chr7	-	2108	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-30	294	-5	-3	multi-exon	FALSE	canonical	1	5	junction_3	4.02768199119819	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGTCTACTCCAGG	NA	False	NA	-2	True	AATAAA	-17	NA	34512141	34374186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
Isoform_65025_16	chr7	-	3690	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	-8	1027	-8	-1027	multi-exon	FALSE	canonical	3	425	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTTTTTCTTCGTGGGT	NA	False	NA	-5	True	AATAAA	-18	NA	34756006	34746873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34750358_34755800
Isoform_65026_27	chr7	-	3658	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	24	1027	24	-1027	multi-exon	FALSE	canonical	3	425	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTTTTTCTTCGTGGGT	NA	False	NA	-5	True	AATAAA	-18	NA	34755974	34746873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34750358_34755800
Isoform_6503_17	chr11	-	2108	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	-25	2225	-25	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578458	90536515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
Isoform_65034_12	chr7	-	3040	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	18	7	-1	1	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGCTTCTTGAT	NA	False	NA	NA	False	ATTAAA	-11	NA	35017847	34975967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
Isoform_6504_22	chr11	-	1955	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	-47	705	-47	-705	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACATGATTTTTTTTC	NA	False	NA	-8	True	AATAAA	-19	NA	93776639	93750773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_65042_3	chr7	-	1836	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	28	-7	28	7	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGCTATATATCCTTA	NA	False	NA	NA	False	AATAGA	-31	NA	35096233	35091569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
Isoform_65046_136	chr7	-	1578	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	24	18	24	11	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCAGAATTCTTGCTTC	NA	False	NA	-31	True	AATAAA	-15	NA	35237146	35193054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_65047_4	chr7	-	1664	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-24	-13	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	137.361139499598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATTCTTGCTTCTAAAA	NA	False	NA	-26	True	AATAAA	-20	NA	35237142	35193049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_6505_230	chr11	-	1875	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	30	708	30	-708	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTGTACATGATTTTTT	NA	False	NA	-11	True	AATAAA	-16	NA	93776562	93750776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_65052_4	chr7	-	1348	3	FSM	ENSMUSG00000034875.6	ENSMUST00000142930.2	733	3	-292	-323	-292	-13	multi-exon	FALSE	canonical	3	20	junction_2	165.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACATCCAAGTTGTAT	NA	False	NA	-11	True	ATTAAA	-16	NA	35254911	35246622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35247549_35250878_35250968_35254578
Isoform_65053_14	chr7	-	1882	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	410	6	410	-6	multi-exon	FALSE	canonical	3	351	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTTGTATTTTTTAT	NA	False	NA	-4	True	ATTAAA	-23	NA	35255319	35246615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_65055_40	chr7	-	1467	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	824	7	-286	-7	multi-exon	FALSE	canonical	3	351	junction_1	2	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAGTTGTATTTTTTA	NA	False	NA	-5	True	ATTAAA	-22	NA	35254905	35246616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_6506_324	chr11	-	1848	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	57	708	57	-708	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTGTACATGATTTTTT	NA	False	NA	-11	True	AATAAA	-16	NA	93776535	93750776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_65061_5	chr7	-	1391	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	375	532	375	-196	multi-exon	FALSE	canonical	3	351	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAACGGTTTCACGACA	NA	False	NA	-4	True	AGTAAA	-14	NA	35255354	35247141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35247549_35250878_35251087_35254578
Isoform_65064_635	chr7	-	618	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	32	34	-9	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTGGGTGTTTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	35346914	35341440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
Isoform_6507_9	chr11	-	2547	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	55	11	55	-11	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAATTTACACATGCT	NA	False	NA	NA	False	NA	NA	NA	93776537	93750079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
Isoform_65071_5	chr7	-	4283	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	46	3677	-9	1883	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATTTAAATAGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	35453833	35388266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
Isoform_65072_8	chr7	-	3550	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	35	4421	-20	1139	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCTCTTGCCATTTGGA	NA	False	NA	NA	False	ATTAAA	-31	NA	35453844	35389010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
Isoform_65075_4	chr7	-	6691	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-11	13	3	-13	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAAAAACCACTTGTTT	NA	False	NA	NA	False	AATAAA	-8	NA	35502425	35471780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
Isoform_65079_181	chr7	-	3449	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-10	2	-10	-1	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718977	37659418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_65080_470	chr7	-	2483	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	17	941	-3	-291	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTGAACTTCCTGG	NA	False	NA	-3	True	AGTAAA	-24	NA	37718950	37660357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_65084_16	chr7	-	2544	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-44	941	-20	-291	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTGAACTTCCTGG	NA	False	NA	-3	True	AGTAAA	-24	NA	37719011	37660357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
Isoform_65089_34	chr7	-	2448	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-3	-291	combination_of_known_splicesites	FALSE	canonical	3	145	junction_9	251.968251968378	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTGAACTTCCTGG	NA	False	NA	-3	True	AGTAAA	-24	NA	37718950	37660357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
Isoform_65090_11	chr7	-	3411	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGAGCCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-21	NA	37718975	37659419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
Isoform_65091_18	chr7	-	3386	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	3	145	junction_9	251.968251968378	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGAGCCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-21	NA	37718950	37659419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
Isoform_65098_525	chr7	-	1942	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	57	1	25	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806902	37797409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_65099_19	chr7	-	2074	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-75	1	-75	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37807034	37797409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_651_148	chr10	-	1515	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	10	0	10	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7499	False	NA	-10	True	AATAAA	-8	NA	7656645	7643719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
Isoform_65100_163	chr7	-	2027	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-28	1	-28	-1	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806987	37797409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
Isoform_65107_9	chr7	-	1871	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	27	-1	combination_of_known_splicesites	FALSE	canonical	2	124	junction_8	222.463053112197	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTTCTTAACTCTG	NA	False	NA	-13	True	AATAAA	-18	NA	37806900	37797409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37806020_37806109_37806211_37806255_37806746
Isoform_65108_71	chr7	-	1527	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	34	3702	34	-3702	multi-exon	FALSE	canonical	3	140	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTTGATTGTTAAGAG	NA	False	NA	-21	True	NA	NA	NA	37927406	37920097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37921583_37927364
Isoform_65109_173	chr7	-	1241	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	44	828	-6	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970803	37962247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
Isoform_65110_5	chr7	-	2301	7	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-828	intron_retention	TRUE	canonical	3	24	junction_5	91.4706996195442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970799	37962247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37968084_37968325_37968379_37970570
Isoform_65111_3	chr7	-	1177	6	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-4	-828	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	108.909870994323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970801	37962247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_37962734_37963751_37963854_37965550_37965629_37966792_37967020_37968325_37968379_37970570
Isoform_65112_3	chr7	-	2060	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	10	1	10	-1	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	41042793	41023214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
Isoform_65113_4	chr7	-	2902	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	34	-865	-33	-2	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTTTTTTCTGACTT	NA	False	NA	-16	True	AATAAA	-23	NA	41042769	41022348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
Isoform_65114_3	chr7	-	1344	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	-8	1	-8	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTGATGGTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	41148840	41139271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_41140493_41148717
Isoform_65115_16	chr7	-	475	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	2	953	2	-215	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACAGATACTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	41210251	41196050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
Isoform_65116_6	chr7	-	4088	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-21	2	-7	-2	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTACTTACTGCTGTC	NA	False	NA	-17	True	AATAAA	-13	NA	42155171	42122811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
Isoform_65121_3	chr7	-	3688	4	FSM	ENSMUSG00000108446.2_ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	-12	-2251	-12	2251	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTCTTATC	NA	False	NA	-3	True	AGTAAA	-23	NA	42241983	42226955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
Isoform_65124_3	chr7	-	3550	3	Fusion	ENSMUSG00000108446.2_ENSMUSG00000092335.2	novel	1425	4	NA	NA	-3	2249	multi-exon	FALSE	canonical	3	30	junction_2	106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAATTTGTTTTTCTTA	NA	False	NA	-5	True	AGTAAA	-21	NA	42241974	42226957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_-_42230333_42232070_42232132_42241860
Isoform_65126_3	chr7	-	4086	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	-10	-3	-10	3	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTAGTAATTTGTT	NA	False	NA	-11	True	AATAAA	-17	NA	42516668	42466249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
Isoform_65127_4	chr7	-	4200	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962695	42945946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
Isoform_65128_5	chr7	-	4057	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	127	0	-33	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962552	42945946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
Isoform_65129_3	chr7	-	1058	5	NIC	ENSMUSG00000008028.16	novel	913	6	NA	NA	19	-6	intron_retention	FALSE	canonical	2	14	junction_4	7.66485485837795	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCCATTTCTCTCGG	NA	False	NA	NA	False	TATAAA	-13	NA	44024435	44009472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746_44023949_44024410
Isoform_65130_86	chr7	-	1691	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-41	12	16	-12	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145871	44139546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_65132_334	chr7	-	1598	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	72	185	-13	-12	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145865	44139546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_65133_14	chr7	-	1789	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	66	0	16	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTTCTTGGTTCATTC	NA	False	NA	27	True	NA	NA	NA	44145871	44139361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_65134_27	chr7	-	1888	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	11	-12	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145876	44139546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_65135_13	chr7	-	2571	6	FSM	ENSMUSG00000008140.19	ENSMUST00000150342.2	992	6	33	-1612	-2	-12	multi-exon	FALSE	canonical	3	981	junction_1	39.9579779268171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145854	44139546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
Isoform_65136_3	chr7	-	1197	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17452	26	1874	-26	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTATCATGTGTCCAT	NA	False	NA	-21	True	GATAAA	-11	NA	44156628	44151148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
Isoform_65149_1302	chr7	-	3404	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	50	0	41	0	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198221	44182169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
Isoform_65150_172	chr7	-	3429	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	27	-2	18	2	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198244	44182167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
Isoform_65151_21	chr7	-	3527	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	-72	-1	-70	1	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTTGTGGTCTTTGG	NA	False	NA	-1	True	AATAAA	-22	NA	44198343	44182168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
Isoform_65165_256	chr7	-	1957	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	0	31	0	4	multi-exon	FALSE	canonical	0	0	junction_9	219.110209599227	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_65166_17	chr7	-	1943	10	NIC	ENSMUSG00000060601.14	novel	1988	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	212.17137261663	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203246
Isoform_65167_123	chr7	-	1960	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	-25	13	0	4	multi-exon	FALSE	canonical	0	0	junction_9	233.829683717988	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_65170_416	chr7	-	1964	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	3	32	2	4	multi-exon	TRUE	canonical	0	0	junction_9	207.457626195488	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_65174_235	chr7	-	1969	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.012290227209	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_65176_21	chr7	-	2062	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	241.126522804937	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_65181_140	chr7	-	2227	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-37	-337	0	4	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203372	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
Isoform_65183_85	chr7	-	2228	9	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	2	4	intron_retention	FALSE	canonical	0	0	junction_8	224.141696254847	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAATAAAGTTT	NA	False	NA	-32	True	NA	NA	NA	44203370	44199071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
Isoform_65188_6	chr7	-	1052	2	ISM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7004	-2	7004	0	3prime_fragment	FALSE	canonical	3	83	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	620	False	NA	-1	True	AATAAA	-17	NA	44256545	44255226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44255788_44256054
Isoform_6519_1831	chr11	-	628	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	383	1	-93	-1	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCAGTGTTCAGTACTC	NA	False	NA	-29	True	NA	NA	NA	93846702	93840640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
Isoform_65190_13	chr7	-	1430	7	FSM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	7	1	7	-1	multi-exon	FALSE	canonical	3	22	junction_6	22.8837642591132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGGCTGCGTTTCTA	NA	False	NA	-4	True	AATAAA	-14	NA	44263542	44255229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263374
Isoform_65191_4	chr7	-	3881	21	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	34599	3	-320	-1	3prime_fragment	FALSE	canonical	3	29	junction_14	18.5391477689779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGGCTGCGTTTCTA	NA	False	NA	-4	True	AATAAA	-14	NA	44280326	44255229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137
Isoform_65192_5	chr7	-	3721	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_20	20.5294909824866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	44280019	44255227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279992
Isoform_65193_3	chr7	-	3762	5	NIC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	16.8077363139716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTTTTAATTTTT	NA	False	NA	-5	True	AATAAA	-24	NA	44397553	44380903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397333
Isoform_65194_4	chr7	-	3685	5	NIC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	16.8077363139716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTCACTGGCTATTT	NA	False	NA	-15	True	AATAAA	-14	NA	44397486	44380913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397333
Isoform_65195_8	chr7	-	3758	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	223	-2975	-77	-4	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGGCTATTTTTTAAT	NA	False	NA	-9	True	AATAAA	-20	NA	44397550	44380907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
Isoform_65197_8	chr7	-	3584	5	FSM	ENSMUSG00000048012.20	ENSMUST00000060270.13	3800	5	224	-8	-2	-3	multi-exon	FALSE	canonical	2	7	junction_4	22.9605640174626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397817	44380906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397775
Isoform_65198_21	chr7	-	1756	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	59	1	-25	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9745	False	NA	-1	True	AATAAA	-18	NA	44466023	44461680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44462945_44464412_44464707_44465825
Isoform_65199_11	chr7	-	2188	17	FSM	ENSMUSG00000038520.16	ENSMUST00000145959.8	2362	17	178	-4	-6	4	multi-exon	FALSE	canonical	2	8	junction_3	59.8690954813082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTGGCATCAGGACAC	7877	False	NA	-6	True	AATAAA	-19	NA	44498325	44490451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_652_8	chr10	-	4277	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	5	-54	5	1	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTTCTTTTTTAACG	NA	False	NA	NA	False	ATTAAA	-15	NA	8394584	8080518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
Isoform_65202_712	chr7	-	2177	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	174	6399	-6	10	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCAGGACACTTTGCT	7877	False	NA	0	True	AATAAA	-25	NA	44498325	44490445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_65203_34	chr7	-	2371	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	-23	6402	-19	7	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGCATCAGGACACTTT	7680	False	NA	-3	True	AATAAA	-22	NA	44498522	44490448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_65204_15	chr7	-	2302	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	174	6274	-6	4	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGTAGTGTTCATTCA	7877	False	NA	NA	False	NA	NA	NA	44498325	44490320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
Isoform_6521_146	chr11	-	756	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	256	0	-220	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846829	93840639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
Isoform_65211_136	chr7	-	1572	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5567	False	NA	-9	True	AATAAA	-14	NA	44519085	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65212_15	chr7	-	1661	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5478	False	NA	-9	True	AATAAA	-14	NA	44519174	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65213_7	chr7	-	1717	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5422	False	NA	-9	True	AATAAA	-14	NA	44519230	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65216_22	chr7	-	2222	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	0	intron_retention	FALSE	canonical	3	386	junction_1	122.965627126224	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5567	False	NA	-9	True	AATAAA	-14	NA	44519085	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65218_10	chr7	-	2277	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	146	-2	intron_retention	FALSE	canonical	3	386	junction_1	125.995277689285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5586	False	NA	-12	True	AATAAA	-11	NA	44519066	44512494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65220_201	chr7	-	1756	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	127	0	127	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5567	False	NA	-9	True	AATAAA	-14	NA	44519085	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65221_23	chr7	-	1901	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5422	False	NA	-9	True	AATAAA	-14	NA	44519230	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65227_19	chr7	-	2387	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	146	0	intron_retention	FALSE	canonical	3	715	junction_6	42.6240542417072	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5586	False	NA	-9	True	AATAAA	-14	NA	44519066	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65228_12	chr7	-	2483	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	0	intron_retention	FALSE	canonical	3	715	junction_5	41.8810779631808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5567	False	NA	-9	True	AATAAA	-14	NA	44519085	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65230_7	chr7	-	2507	11	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	129	0	intron_retention	FALSE	non_canonical	0	0	junction_2	241.756592464404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5569	False	NA	-9	True	AATAAA	-14	NA	44519083	44512491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44512869_44512958_44513923_44513943_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
Isoform_65233_40	chr7	-	3720	18	FSM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	-27	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	207.582576223432	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6949	False	NA	-4	True	NA	NA	NA	44541842	44526188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65239_15	chr7	-	3594	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-5	-60	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	279.794783893035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTTGTGTTGTATTCCA	6943	False	NA	3	True	NA	NA	NA	44541848	44526248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65243_15	chr7	-	2553	19	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	278.978344440329	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538942_44541206_44541332_44541522_44541569_44541654
Isoform_65244_904	chr7	-	2328	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	288	3	-5	-3	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6943	False	NA	-9	True	AATAAA	-14	NA	44541848	44528810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65248_212	chr7	-	2331	18	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	175	junction_9	180.66160609536	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6943	False	NA	-9	True	AATAAA	-14	NA	44541848	44528810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65251_88	chr7	-	2250	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65252_25	chr7	-	2255	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	261.121551856123	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTCCCGTGACTGAC	6949	False	NA	-7	True	AATAAA	-16	NA	44541842	44528808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65255_21	chr7	-	2734	17	FSM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	-52	-4	0	-3	multi-exon	FALSE	canonical	3	744	junction_8	64.3087948398195	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCCCGTGACTG	6949	False	NA	-9	True	AATAAA	-14	NA	44541842	44528810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
Isoform_65260_44	chr7	-	3368	23	NIC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	10	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	144.442358888666	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578904	44549796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_65261_3	chr7	-	3308	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.442358888666	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAGCTATTGACTGCC	NA	False	NA	-9	True	AATAAA	-18	NA	44578853	44549803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552174_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_65262_3	chr7	-	4502	21	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	11	-4	intron_retention	FALSE	canonical	3	560	junction_17	48.4758702861537	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTATTGACTGCCCA	NA	False	NA	-7	True	AATAAA	-20	NA	44578875	44549801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
Isoform_65264_22	chr7	-	2730	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	64	-1	-9	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2728	False	NA	-1	True	AATAAA	-21	NA	44624211	44608795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
Isoform_65265_4	chr7	-	2728	19	FSM	ENSMUSG00000007783.11	ENSMUST00000212836.2	2716	19	-12	0	-9	0	multi-exon	FALSE	canonical	1	2	junction_18	22.8379287076197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2728	False	NA	-1	True	AATAAA	-21	NA	44624211	44608795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624020
Isoform_65266_6	chr7	-	2200	14	NNC	ENSMUSG00000007783.11	novel	2716	19	NA	NA	2457	0	intron_retention	FALSE	canonical	2	5	junction_13	22.7783245873334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	6895	False	NA	-1	True	AATAAA	-21	NA	44620044	44608795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675
Isoform_65270_116	chr7	-	1309	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	202	-3	-10	3	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	-27	True	AATAAA	-20	NA	44635790	44626178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
Isoform_65272_2417	chr7	-	1256	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	125	766	-11	3	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	2417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	-27	True	AATAAA	-20	NA	44635791	44626178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
Isoform_65273_32	chr7	-	2023	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	125	-1	-11	1	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTTTGCGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	44635791	44625411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
Isoform_65274_46	chr7	-	1300	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	78	769	20	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635838	44626181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
Isoform_6528_1378	chr11	-	679	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	2253	0	240	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	634	False	NA	-16	True	ATTAAA	-15	NA	93859098	93850057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_65281_74	chr7	-	1078	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44647006	44640645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_65282_5	chr7	-	964	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	59.7943141109587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGAAAGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	44646986	44640647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_65283_3	chr7	-	2231	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	129	junction_1	14.1619207736804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGAAAGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	44647014	44640648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44640879_44642167_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_65284_10	chr7	-	686	5	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	66.4115953730973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGAAAGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	44646996	44640647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44640879_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_65286_4	chr7	-	3513	5	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	154	junction_1	5.1234753829798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCCGAAAGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	44647008	44640649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
Isoform_65288_19	chr7	-	4035	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	258	0	26	0	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5312	False	NA	-6	True	ATTAAA	-17	NA	44665529	44652371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
Isoform_65289_3	chr7	-	1360	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	-72	7	-18	-7	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATGAGAAAAAAATAAA	NA	False	NA	-60	True	AATAAA	-8	NA	44711148	44703043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
Isoform_6529_192	chr11	-	985	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	1947	0	546	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGCCCAGGCCTG	634	False	NA	-5	True	AATAAA	-13	NA	93859098	93849751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_65290_5	chr7	-	1324	8	FSM	ENSMUSG00000007837.12	ENSMUST00000210690.2	1623	8	273	26	0	3	multi-exon	FALSE	canonical	3	9	junction_7	11.5121940673747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAATGCAAAAG	NA	False	NA	-50	True	AATAAA	-18	NA	44711828	44703033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011_44711076_44711801
Isoform_65291_39	chr7	-	1431	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	26	5	-10	-5	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGTCTGTCTGT	6686	False	NA	-9	True	AATAAA	-20	NA	44741619	44732341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
Isoform_65292_27	chr7	-	1433	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	15	5	8	-5	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTCTGTCTGTCTGT	6675	False	NA	-9	True	AATAAA	-20	NA	44741630	44732341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
Isoform_65293_5	chr7	-	1378	7	NIC	ENSMUSG00000019539.12	novel	1453	7	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	63.9463751035889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGTCTGTCTGTCT	6677	False	NA	-7	True	AATAAA	-22	NA	44741628	44732339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741583
Isoform_65294_31	chr7	-	1638	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	59	73	3	1	multi-exon	FALSE	canonical	3	66	junction_3	11.6583303550151	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTGTGCATCGTTA	824	False	NA	-6	True	CATAAA	-11	NA	44753216	44742486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
Isoform_65295_5	chr7	-	1751	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2646	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	25.6515106767613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTGTGCATCGTTA	NA	False	NA	-6	True	CATAAA	-11	NA	44755921	44742486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44755780
Isoform_65296_3	chr7	-	588	2	FSM	ENSMUSG00000003420.9	ENSMUST00000211535.2	595	2	13	-6	13	6	multi-exon	FALSE	canonical	3	98	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGTGTCCGTCTGTCC	834	False	NA	NA	False	AATACA	-19	NA	44753206	44752252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44752698_44753063
Isoform_653_5	chr10	-	651	6	ISM	ENSMUSG00000015305.7	ENSMUST00000015449.6	7183	20	25	64158	7	27345	5prime_fragment	FALSE	canonical	3	4	junction_1	1.62480768092719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAATAATGAGACAGA	808	False	NA	NA	False	AATAAA	-30	NA	8761789	8662140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_8662199_8665324_8665366_8690004_8690055_8690170_8690222_8726106_8726236_8761467
Isoform_6530_292	chr11	-	701	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	227	2253	-22	240	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	612	False	NA	-16	True	ATTAAA	-15	NA	93859120	93850057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_65302_7494	chr7	-	587	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	67	7	-21	7	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	7494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAGGCTTGGAGTCTC	NA	False	NA	-8	True	AATAAA	-17	NA	44773796	44771809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
Isoform_65304_128	chr7	-	669	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	-13	5	-13	-5	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773876	44771807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
Isoform_65324_128	chr7	-	798	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	17	-81	2	0	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778142	44775345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
Isoform_65326_5184	chr7	-	658	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	364	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	5184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
Isoform_65327_795	chr7	-	1016	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	6	0	-6	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTACGATGTGTGCTG	NA	False	NA	-7	True	AATAAA	-13	NA	44778160	44774987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
Isoform_6533_34	chr11	-	1007	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	227	1947	-22	546	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGCCCAGGCCTG	612	False	NA	-5	True	AATAAA	-13	NA	93859120	93849751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
Isoform_65345_1555	chr7	-	2603	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	3	931	3	-1	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGAGGATGTGGGAAC	9336	False	NA	-9	True	AATAAA	-19	NA	44803994	44791259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
Isoform_65347_32	chr7	-	2487	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	12	2	combination_of_known_junctions	TRUE	canonical	3	27	junction_15	102.490454840113	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGATGTGGGAACAGT	9352	False	NA	-6	True	AATAAA	-22	NA	44803978	44791256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
Isoform_65355_22	chr7	-	2018	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	393	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACAGGATGATTTCCTC	9471	False	NA	-4	True	NA	NA	NA	44853923	44833047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
Isoform_65356_16	chr7	-	913	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	230	6	-70	0	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAATCTCCTTTTGGTAT	8531	False	NA	-4	True	AATAAA	-17	NA	44861317	44856948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
Isoform_65358_15	chr7	-	1208	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	13	6	-12	-1	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTGG	4432	False	NA	-19	True	AATAAA	-19	NA	44888251	44883061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
Isoform_65359_11	chr7	-	2547	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	5	-11	5	6	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGTAAAAATAGCTT	4449	False	NA	-7	True	AATAAA	-31	NA	44888234	44883049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
Isoform_65362_3	chr7	-	960	2	FSM	ENSMUSG00000030798.16	ENSMUST00000210372.2	960	2	4	-4	4	4	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGAAAGGA	4467	False	NA	NA	False	NA	NA	NA	44888216	44887169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44887997_44888083
Isoform_65363_53	chr7	-	4031	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	1	202	0	1	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGCACATGCTTGGCTC	3202	False	NA	-9	True	AATAAA	-16	NA	44983192	44952780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
Isoform_65364_5	chr7	-	1161	3	ISM	ENSMUSG00000003863.19	ENSMUST00000211098.2	1467	4	389	-1	-9	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	7375	False	NA	-2	True	NA	NA	NA	44990195	44988549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44989442_44989612_44989685_44989998
Isoform_65365_3	chr7	-	2842	7	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23026	0	-2528	0	intron_retention	FALSE	canonical	3	29	junction_6	11.9536140513607	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	4458	False	NA	-2	True	NA	NA	NA	44993112	44988549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749
Isoform_65366_4	chr7	-	1755	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23063	-1	-2491	1	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGCTTTTGTTCTTAAG	4495	False	NA	-1	True	NA	NA	NA	44993075	44988548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
Isoform_65368_10	chr7	-	3206	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4683	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTGGTGGTGACCAG	9489	False	NA	-5	True	NA	NA	NA	45004854	44988701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
Isoform_65369_4	chr7	-	3294	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4747	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	9553	False	NA	-2	True	NA	NA	NA	45004790	44988549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
Isoform_65370_3	chr7	-	3340	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4702	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGCTTTTGTTCTTAAG	9508	False	NA	-1	True	NA	NA	NA	45004835	44988548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
Isoform_65372_5	chr7	-	1427	7	NNC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	-1066	-2	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	15.0711276581711	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGTGGTGACCAGC	5920	False	NA	-4	True	NA	NA	NA	44991650	44988700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
Isoform_65373_13	chr7	-	762	6	FSM	ENSMUSG00000003872.10	ENSMUST00000003971.10	735	6	-27	0	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	1.93907194296653	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	7915	False	NA	1	True	TTTAAA	-16	NA	45020034	45017314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45017423_45017727_45017892_45018564_45018775_45019338_45019411_45019550_45019670_45019945
Isoform_65378_26	chr7	-	1796	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	573.136842298591	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGGCATGTGATGTCTT	9052	False	NA	-8	True	AATAAA	-17	NA	45045155	45025884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
Isoform_65380_739	chr7	-	1683	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	50	2	0	-2	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGATGTCTTACTGCA	9091	False	NA	-2	True	AATAAA	-23	NA	45045116	45025878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_65389_60	chr7	-	2516	8	ISM	ENSMUSG00000063511.12	ENSMUST00000211290.2	3035	11	0	4875	0	15	5prime_fragment	FALSE	canonical	3	95	junction_1	496.126136035124	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAACA	9091	False	NA	NA	False	NA	NA	NA	45045116	45030761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_6539_19	chr11	-	938	8	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	84	5900	-9	17	5prime_fragment	FALSE	canonical	3	230	junction_7	21.9981446341945	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGGGAAAA	NA	False	NA	23	True	NA	NA	NA	94212730	94187864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_65391_44	chr7	-	3135	7	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	50	4885	0	15	5prime_fragment	FALSE	canonical	3	1192	junction_6	158.331666657895	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAACA	9091	False	NA	NA	False	NA	NA	NA	45045116	45030761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
Isoform_65396_1778	chr7	-	1494	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	340	0	-6	0	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	-19	True	NA	-4	True	TATAAA	-15	NA	45083707	45071321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_65397_90	chr7	-	1819	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	17	-2	17	1	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9199	False	NA	-2	True	TATAAA	-17	NA	45084030	45071319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_65399_75	chr7	-	1593	16	NIC	ENSMUSG00000003868.15	novel	2312	18	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	624.837258812245	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9162	False	NA	-2	True	TATAAA	-17	NA	45084067	45071319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084043
Isoform_654_3	chr10	-	1091	4	FSM	ENSMUSG00000015305.7	ENSMUST00000213032.2	1078	4	-6	-7	-6	7	multi-exon	FALSE	canonical	3	6	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	795	False	NA	NA	False	NA	NA	NA	8761802	8689478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_8690055_8690170_8690222_8726106_8726236_8761467
Isoform_6540_15	chr11	-	997	8	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	25	5900	-5	17	5prime_fragment	FALSE	canonical	3	230	junction_7	21.9981446341945	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGGGAAAA	NA	False	NA	23	True	NA	NA	NA	94212789	94187864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_65403_26	chr7	-	1582	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	-19	True	NA	-2	True	TATAAA	-17	NA	45083707	45071319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
Isoform_65411_16527	chr7	-	923	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	45	0	0	0	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	16527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
Isoform_6542_17	chr11	-	870	7	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	20	6623	-10	-706	5prime_fragment	FALSE	canonical	3	230	junction_6	23.7164968370588	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTTTTTCGTAAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	94212794	94188587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
Isoform_65423_28	chr7	-	775	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	21	5	16	-5	multi-exon	FALSE	canonical	3	256	junction_1	1143.13684220219	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9998	False	NA	-7	True	AATAAA	-17	NA	45116239	45111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_65424_15	chr7	-	858	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	-62	5	0	-5	multi-exon	FALSE	canonical	3	256	junction_1	1143.13684220219	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9915	False	NA	-7	True	AATAAA	-17	NA	45116322	45111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_65427_96	chr7	-	1251	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	16	-167	16	-3	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGGTCCCTTGTCCGC	9998	False	NA	-5	True	AATAAA	-19	NA	45116239	45111123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
Isoform_65430_11	chr7	-	1318	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	-53	-165	14	-5	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9929	False	NA	-7	True	AATAAA	-17	NA	45116308	45111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
Isoform_65432_103	chr7	-	862	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	0	5	0	-5	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9915	False	NA	-7	True	AATAAA	-17	NA	45116322	45111125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_65433_629	chr7	-	799	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	61	7	-1	-7	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGTATGGTCCCTTGT	9976	False	NA	-9	True	AATAAA	-15	NA	45116261	45111127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
Isoform_65434_45	chr7	-	729	5	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	3	105	junction_4	1322.49735349452	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGGTCCCTTGTCCGC	9998	False	NA	-5	True	AATAAA	-19	NA	45116239	45111123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45116165
Isoform_65442_771	chr7	-	2170	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	32	2651	11	-1	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATCCTGCCCTCTTCCA	NA	False	NA	-5	True	AATAAA	-18	NA	45159798	45142532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
Isoform_65443_156	chr7	-	2403	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	32	2418	11	232	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGCTCAGTTGGCATA	NA	False	NA	-10	True	ATTAAA	-19	NA	45159798	45142299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
Isoform_65448_558	chr7	-	2285	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	44	4	44	1	multi-exon	FALSE	canonical	3	356	junction_2	34	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTTACGTGTGTTCT	3905	False	NA	40	True	AATAAA	-20	NA	45175648	45172344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45172747_45173162_45174816_45175418
Isoform_65449_21	chr7	-	2320	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	11	2	11	-2	multi-exon	FALSE	canonical	3	356	junction_2	34	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTACGTGTGTTCTTT	3872	False	NA	42	True	AATAAA	-22	NA	45175681	45172342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45172747_45173162_45174816_45175418
Isoform_65450_8	chr7	-	2699	2	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	44	-1	intron_retention	FALSE	canonical	3	356	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAACTCTTACGTGTGTT	3905	False	NA	38	True	AATAAA	-18	NA	45175648	45172346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45174816_45175418
Isoform_65453_3	chr7	-	936	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	-5	20	-5	-20	multi-exon	FALSE	canonical	2	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAATGTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	45264919	45263329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45263735_45264289_45264394_45264492
Isoform_65454_3	chr7	-	2862	2	FSM	ENSMUSG00000055978.6	ENSMUST00000069800.6	2955	2	89	4	3	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTCATGGTTTTTGTT	9604	False	NA	NA	False	AATAAA	-17	NA	45315729	45298018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45300773_45315621
Isoform_65455_14	chr7	-	2458	4	FSM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	5	7	5	-7	multi-exon	TRUE	canonical	0	0	junction_3	5.43650214343336	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343821	45327116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45328949_45333603_45333716_45334689_45334780_45343397
Isoform_65456_13	chr7	-	2345	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	28	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343798	45327116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45328949_45333603_45333716_45343397
Isoform_65459_46	chr7	-	2982	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	3	-17	3	-1	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	5960	False	NA	-7	True	AATAAA	-34	NA	45364628	45359691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
Isoform_65460_4	chr7	-	3278	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	-21	-289	-21	271	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGACGTTCTTCGGGCAC	5936	False	NA	NA	False	TATAAA	-15	NA	45364652	45359419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
Isoform_65463_5	chr7	-	3327	6	ISM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	60	798	-40	2	intron_retention	FALSE	canonical	3	87	junction_5	18.0554700852678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACATCCCTTTCAGTTAT	3222	False	NA	-4	True	AATAAA	-37	NA	45367366	45359688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416
Isoform_65464_119	chr7	-	2655	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	75	818	-25	0	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3237	False	NA	-24	True	AATAAA	-17	NA	45367351	45359708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_65465_22	chr7	-	2716	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	33	799	33	1	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACATCCCTTTCAGTTA	3195	False	NA	-5	True	AATAAA	-36	NA	45367393	45359689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_65467_7	chr7	-	2959	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	60	529	-40	271	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGACGTTCTTCGGGCAC	3222	False	NA	NA	False	TATAAA	-15	NA	45367366	45359419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
Isoform_65469_5	chr7	-	2831	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-29	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	51.1899224776255	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCCTTCCACCCGACA	3233	False	NA	-18	True	AATAAA	-23	NA	45367355	45359702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366666_45366833_45367124
Isoform_6547_21	chr11	-	1131	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40890	0	-900	0	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	5	True	NA	-4	True	AATAAA	-17	NA	94242912	94234120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
Isoform_65470_3	chr7	-	2963	7	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	41.7748595316476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3274	False	NA	-24	True	AATAAA	-17	NA	45367314	45359708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366833_45367124
Isoform_65471_29	chr7	-	2563	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-5	19	-5	-1	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTTCACCCCTTCCA	3257	False	NA	-25	True	AATAAA	-16	NA	45367331	45359709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
Isoform_65472_5	chr7	-	2626	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-67	18	33	0	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3195	False	NA	-24	True	AATAAA	-17	NA	45367393	45359708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
Isoform_65474_3	chr7	-	1543	12	FSM	ENSMUSG00000003269.18	ENSMUST00000209245.2	1512	12	12	-43	-3	13	multi-exon	FALSE	canonical	1	1	junction_4	132.007888569692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGCGCCTGCAGATG	3183	False	NA	NA	False	NA	NA	NA	45463714	45457019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_65475_114	chr7	-	1522	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	54	943	25	29	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3216	False	NA	NA	False	NA	NA	NA	45463681	45457003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_65476_57	chr7	-	1578	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	-2	943	-2	29	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3160	False	NA	NA	False	NA	NA	NA	45463737	45457003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
Isoform_65480_1261	chr7	-	1894	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	4	0	4	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCCTCTGAGCTTCTT	8638	False	NA	-4	True	AATAAA	-31	NA	45480209	45474650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
Isoform_65483_30	chr7	-	1772	6	FSM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	10	1	4	-1	multi-exon	FALSE	canonical	2	14	junction_5	183.663387750526	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACAAGTCCTCTGAGCT	8638	False	NA	-8	True	AATAAA	-27	NA	45480209	45474654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
Isoform_65486_4	chr7	-	935	5	FSM	ENSMUSG00000040231.17	ENSMUST00000039049.16	967	5	30	2	-14	-2	multi-exon	FALSE	canonical	3	25	junction_2	22.466641938661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGTCCTGTCTGTTCC	NA	False	NA	-5	True	AGTAAA	-27	NA	45546108	45536270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45536550_45536790_45536931_45538035_45538274_45545114_45545316_45546031
Isoform_65487_15	chr7	-	821	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-40	-59	4	-2	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGTCCTGTCTGTTCC	NA	False	NA	-5	True	AGTAAA	-27	NA	45546134	45536270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
Isoform_65489_13	chr7	-	620	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	115	1	13	-1	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCGGCTCCTCTTCCTT	4473	False	NA	NA	False	AATAAA	-19	NA	45570713	45567447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
Isoform_6549_14	chr11	-	1072	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40827	0	-963	0	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	94242975	94234120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
Isoform_65490_20	chr7	-	1445	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	3	17	0	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCCCTGGAGAACCC	NA	False	NA	-27	True	AATAAA	-18	NA	46289228	46092594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
Isoform_65491_277	chr7	-	1502	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	29	3197	7	-1	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGCATCGGGATGATGG	NA	False	NA	-13	True	AATAAA	-23	NA	46360075	46338728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_65492_3	chr7	-	1712	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	-2	3018	-2	143	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTTGTCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	46360106	46338549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_65494_4	chr7	-	2051	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	20	2657	1	504	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTGTAAGGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	46360084	46338188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
Isoform_65495_3	chr7	-	4582	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445109	46409894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
Isoform_65496_3	chr7	-	4482	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	-67	7	-2	-1	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAACATGGATATGAGA	NA	False	NA	-5	True	AATAAA	-19	NA	46445490	46409896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
Isoform_65497_5	chr7	-	1376	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	7	208	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	371.218746865903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCTCTTTCTTGG	NA	False	NA	-38	True	AATAAA	-10	NA	46569678	46539125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558712_46560492_46560559_46563125_46563211_46569568
Isoform_65498_20	chr7	-	1410	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	7	214	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	-32	True	AATAAA	-16	NA	46569678	46539119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
Isoform_65499_330	chr7	-	1503	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	20	426	-5	211	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTTTCTTGGACT	NA	False	NA	-35	True	AATAAA	-13	NA	46569697	46539122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
Isoform_655_3	chr10	-	2057	9	ISM	ENSMUSG00000019790.18	ENSMUST00000125200.8	3300	25	-542	63862	-146	-9059	5prime_fragment	FALSE	canonical	3	16	junction_7	5.01092556320686	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGCTTCATTTTAA	5860	False	NA	NA	False	AATAAA	-20	NA	9776969	9700518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
Isoform_65500_7	chr7	-	1600	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	9	340	9	-262	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTCAGTATTCTGTA	NA	False	NA	51	True	AATAAA	-24	NA	46569708	46539036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
Isoform_65504_6	chr7	-	4536	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	74	6	9	-6	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTATCTGCTGTCTG	NA	False	NA	NA	False	AATAAA	-12	NA	46608201	46572969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
Isoform_65509_6	chr7	-	444	2	ISM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	8	9375	8	6739	5prime_fragment	FALSE	canonical	3	26	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGCTTGTACTGCATC	9280	False	NA	NA	False	AAAAAG	-1	NA	46658151	46649518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_46649634_46657822
Isoform_6551_10	chr11	-	935	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	588	False	NA	-4	True	AATAAA	-17	NA	94242359	94234120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
Isoform_65510_5	chr7	-	3701	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-17	7	-17	-7	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACTTAACATTTTCA	NA	False	NA	-8	True	ATTAAA	-10	NA	48530806	48516183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
Isoform_65511_5	chr7	-	3650	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	41	0	4	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530748	48516176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
Isoform_65512_15	chr7	-	3554	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-55	0	-55	0	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531399	48516176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
Isoform_65514_17	chr7	-	2908	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	152	-7	-18	7	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTAGATGCACGTGCCT	NA	False	NA	-12	True	AATAAA	-24	NA	51655614	51646911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
Isoform_65518_56	chr7	-	3189	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	24	-16	-2	16	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGATGTTTTTCTCT	NA	False	NA	-4	True	AATAAA	-32	NA	55612200	55581018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
Isoform_6552_3	chr11	-	1009	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-421	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	514	False	NA	-4	True	AATAAA	-17	NA	94242433	94234120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
Isoform_65524_10	chr7	-	2979	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612201	55581033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
Isoform_65525_6	chr7	-	3046	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-6	-1	5	1	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612193	55581033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
Isoform_65526_4	chr7	-	2865	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTGGGGTTTCCCAG	NA	False	NA	-23	True	AATAAA	-13	NA	55612212	55581037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
Isoform_65527_9	chr7	-	1902	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	368	913	368	-913	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTGTTACATTAGAGAC	NA	False	NA	NA	False	AATAAA	-18	NA	55669334	55628227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
Isoform_65528_716	chr7	-	1312	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	620	0	-613	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGTTTTTCTTTGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	59654859	59632862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
Isoform_65529_69	chr7	-	1347	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	-35	620	-35	-613	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGTTTTTCTTTGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	59654894	59632862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
Isoform_65533_4	chr7	-	697	5	FSM	ENSMUSG00000030525.9	ENSMUST00000208304.2	2814	5	-5	2122	-5	-2122	multi-exon	FALSE	canonical	3	12	junction_1	6.86931583201704	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGGGTGGTAGGAT	NA	False	NA	NA	False	AATAAA	-18	NA	62862322	62791294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_62791544_62798330_62798441_62809284_62809330_62861855_62861996_62862169
Isoform_65534_561	chr7	-	1351	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	5045	0	4	multi-exon	FALSE	canonical	3	56	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATCTCA	NA	False	NA	NA	False	AAAACA	-33	NA	63588663	63541143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_63541546_63587714
Isoform_65535_90	chr7	-	1432	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-81	5045	-81	4	multi-exon	FALSE	canonical	3	56	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATCTCA	NA	False	NA	NA	False	AAAACA	-33	NA	63588744	63541143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_63541546_63587714
Isoform_6554_7	chr11	-	2125	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-8	2026	-8	-2026	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTATGTATGTCTCATT	3243	False	NA	NA	False	NA	NA	NA	94440033	94432649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
Isoform_65540_208	chr7	-	2150	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	47	51	15	-51	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTTTCCTGTTGTTT	NA	False	NA	-2	True	AATAAA	-18	NA	64041969	64026325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
Isoform_65554_10	chr7	-	2220	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-87	-1753	-87	1753	multi-exon	FALSE	canonical	3	34	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATATATTGAATTATGT	NA	False	NA	NA	False	TATAAA	-28	NA	65511827	65509000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_65510986_65511592
Isoform_65555_7	chr7	-	3398	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	40	5	40	-5	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGATTGTTTTTCAT	NA	False	NA	-5	True	AATAAA	-14	NA	66077225	66040642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
Isoform_65557_6	chr7	-	3967	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	13	-988	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	66339282	66295300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_65558_3	chr7	-	4029	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	1	-987	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	66339343	66295299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_65559_3	chr7	-	3965	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	-23	986	-23	-986	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	66339367	66295298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
Isoform_6556_39	chr11	-	3085	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	68	1	-34	-1	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGATTGGACTGTAACT	7353	False	NA	-5	True	AATAAA	-18	NA	94492629	94447928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_65561_3	chr7	-	2353	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	20	2386	-11	-97	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	67022586	66884051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_65562_3	chr7	-	640	5	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	29	33923	-2	24	5prime_fragment	FALSE	canonical	3	23	junction_1	9.90896059130321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAATATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	67022577	66917877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
Isoform_65564_18	chr7	-	2826	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	574	False	NA	-2	True	AATAAA	-16	NA	67294977	67163157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_65567_16	chr7	-	2892	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	31	0	4	0	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	603	False	NA	-2	True	AATAAA	-16	NA	67294948	67163157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_65568_16	chr7	-	1426	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	27	1470	0	-474	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGGACGTGTTGTCTT	599	False	NA	NA	False	AATACA	-11	NA	67294952	67164627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_65569_3	chr7	-	2879	9	NIC	ENSMUSG00000030556.14	novel	2761	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	26.9092804623238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCTTCTCTCCTCCT	573	False	NA	-4	True	AATAAA	-14	NA	67294978	67163159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67290851_67291089_67294925
Isoform_6557_11	chr11	-	3170	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	-19	3	-19	-3	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTGATTGGACTGTAA	7266	False	NA	-7	True	AATAAA	-16	NA	94492716	94447930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_65570_8	chr7	-	2689	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	599	False	NA	-2	True	AATAAA	-16	NA	67294952	67163157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_65571_6	chr7	-	1244	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	-474	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGGACGTGTTGTCTT	574	False	NA	NA	False	AATACA	-11	NA	67294977	67164627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
Isoform_65572_260	chr7	-	3875	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	29	1	-24	-1	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGGTGGCTCATTTTT	NA	False	NA	-4	True	AATAAA	-15	NA	68398960	68386743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
Isoform_65575_193	chr7	-	1064	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-24	89	-24	-89	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCCATGCGATTGCAAA	NA	False	NA	-20	True	ATTAAA	-19	NA	68398960	68391347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
Isoform_65577_5	chr7	-	4629	32	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_27	13.8258079568888	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGCAGAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	73191494	73101559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_6558_4	chr11	-	3275	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	-123	2	-123	-2	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGATTGGACTGTAAC	7162	False	NA	-6	True	AATAAA	-17	NA	94492820	94447929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
Isoform_65582_7	chr7	-	2788	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	0	63625	0	7444	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGAAACTTTCTGATG	NA	False	NA	-7	True	NA	NA	NA	73191494	73140010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_65583_4	chr7	-	2681	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	0	7445	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	12.7585505542322	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAACTTTCTGATGT	NA	False	NA	-6	True	NA	NA	NA	73191494	73140009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_65586_44	chr7	-	1008	5	ISM	ENSMUSG00000078671.12	ENSMUST00000026895.14	1571	9	-1	13117	0	-6207	5prime_fragment	FALSE	canonical	3	19	junction_3	11.146748404804	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTAAGTCTTTATC	NA	False	NA	-7	True	NA	NA	NA	73191494	73163844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
Isoform_65588_8	chr7	-	728	5	FSM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	15	-224	15	2	multi-exon	FALSE	canonical	3	58	junction_4	79.8780320238299	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCTCAGTTTGGGCC	NA	False	NA	-10	True	AATAAA	-15	NA	73207706	73193787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207522
Isoform_65589_12	chr7	-	2869	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	-20	2519	-4	-2519	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACACTATTAT	NA	False	NA	NA	False	GATAAA	-39	NA	73663442	73591385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
Isoform_65590_4	chr7	-	1386	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-8	-722	-8	-2	multi-exon	FALSE	canonical	3	19	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGTAGTGGTCTTGC	NA	False	NA	-2	True	NA	NA	NA	75431855	75418787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_75419986_75430372_75430505_75431799
Isoform_65591_4	chr7	-	2660	17	FSM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	599	16444	-20	4	multi-exon	FALSE	canonical	1	2	junction_5	14.7690554877419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAAGAA	NA	False	NA	NA	False	TATAAA	-36	NA	78227557	77842150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_65592_9	chr7	-	3796	14	FSM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	177	4	-16	-4	multi-exon	FALSE	canonical	3	25	junction_10	6.48804088737217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACTGCATCAGACCT	NA	False	NA	NA	False	AATAAA	-17	NA	78227553	77950441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
Isoform_65593_281	chr7	-	977	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	51	106	51	-106	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGATTTGTCCTTGGTG	NA	False	NA	-6	True	ATTAAA	-21	NA	78432786	78425089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
Isoform_65595_51	chr7	-	1128	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	56	-50	56	50	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCAGTGCTGATAGT	NA	False	NA	NA	False	AAAAAG	-16	NA	78432781	78424933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
Isoform_65598_21	chr7	-	2213	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	57	-1	57	-1	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTCTCTTCCTTGAT	NA	False	NA	-2	True	AATAAA	-19	NA	78496954	78477220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
Isoform_65599_3	chr7	-	1412	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-9	1955	-9	-37	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTATTATTATTAT	2266	False	NA	NA	False	TTTAAA	-23	NA	78780775	78766804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
Isoform_656_4	chr10	-	2107	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	43	-1	-41	1	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTCACTTTATGTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	10433966	10420744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_10422196_10426422_10426701_10433588
Isoform_6560_260	chr11	-	2203	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	240	1	-53	-1	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGCTTGGAGGAAGA	4643	False	NA	-6	True	AATAAA	-17	NA	94544550	94535822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
Isoform_65600_3	chr7	-	1522	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-137	1973	-137	-55	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATGATTATTATT	2138	False	NA	NA	False	TTTAAA	-5	NA	78780903	78766822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
Isoform_65603_1214	chr7	-	2112	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	12	1	5	-1	multi-exon	TRUE	canonical	3	296	junction_6	379.595691346581	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798796	78783517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
Isoform_65604_57	chr7	-	2135	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	-11	1	-11	-1	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798819	78783517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
Isoform_65605_3579	chr7	-	2001	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	5	2	5	-1	multi-exon	FALSE	canonical	3	790	junction_6	144.155948541848	3579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798796	78783517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
Isoform_6561_52	chr11	-	2454	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	-11	1	-11	-1	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGCTTGGAGGAAGA	4392	False	NA	-6	True	AATAAA	-17	NA	94544801	94535822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
Isoform_65610_6	chr7	-	1840	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	305	-3	-138	3	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCATGATGAACTTAGG	NA	False	NA	-12	True	AATAAA	-25	NA	79036491	79024614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
Isoform_65611_89	chr7	-	4337	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	164	3336	0	-4	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGTTGTGCTTTCCCG	NA	False	NA	-5	True	AATAAA	-19	NA	79115946	79099314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_65612_13	chr7	-	5028	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	128	2681	-36	469	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTAGACAGTTGGAT	NA	False	NA	-9	True	AATAAA	-17	NA	79115982	79098659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_65613_70	chr7	-	4523	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	162	3152	-2	-1	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79115948	79099130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
Isoform_65614_5	chr7	-	977	3	ISM	ENSMUSG00000039176.18	ENSMUST00000132048.5	4546	24	-33	14338	-33	1	5prime_fragment	FALSE	canonical	0	0	junction_1	138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-41	NA	79115979	79113662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_79113710_79114351_79115120_79115817
Isoform_65615_25	chr7	-	1986	11	FSM	ENSMUSG00000030549.7	ENSMUST00000032766.5	2090	11	101	3	101	3	multi-exon	FALSE	canonical	2	10	junction_10	3.38969025133566	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGGGGAGTGGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	79267304	79243113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
Isoform_65616_11	chr7	-	4582	19	FSM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	-5	0	-5	0	multi-exon	FALSE	canonical	3	29	junction_12	9.36634374031449	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365473	79347845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
Isoform_65617_28	chr7	-	2241	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392828	79385704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79387659_79389912_79390029_79392657
Isoform_65619_7	chr7	-	3794	21	FSM	ENSMUSG00000039062.16	ENSMUST00000107392.8	3797	21	-3	6	-3	-5	multi-exon	FALSE	canonical	1	4	junction_7	3.71853465763061	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGCTTCCAGACTTGT	6797	False	NA	-7	True	AATAAA	-10	NA	79497961	79471556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79497892
Isoform_65621_3	chr7	-	2051	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	-10	3772	-10	3414	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGGGGTGTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	79570407	79528844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_65622_9	chr7	-	5793	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	14	6	14	-6	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCTGTGGCCATG	NA	False	NA	-8	True	AATAAA	-8	NA	79570383	79525078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_65623_21	chr7	-	3388	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	29	2396	-24	-2396	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGGGGTTTTGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	79570368	79527468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_65624_54	chr7	-	1348	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	32	4433	-21	2753	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCAGTGCTGTGCTGTG	NA	False	NA	-1	True	AATACA	-20	NA	79570365	79529505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
Isoform_65625_3	chr7	-	856	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	80	1341	80	-1341	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAAGGGTCTCCAGGCT	9973	False	NA	NA	False	NA	NA	NA	79585027	79576449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
Isoform_6563_31	chr11	-	2278	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	-2	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	78.9567782999419	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	4624	False	NA	-7	True	AATAAA	-16	NA	94544569	94535823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
Isoform_65630_1207	chr7	-	1668	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	74	3	14	1	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765066	79744596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_65631_43	chr7	-	1722	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	20	3	20	1	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765120	79744596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_65636_34	chr7	-	2346	9	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	14	1	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765066	79744596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_65638_18	chr7	-	2099	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	1495	junction_4	203.626988921616	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGATGTGTTTG	NA	False	NA	-8	True	AAAAAG	-10	NA	79765080	79744596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
Isoform_6564_5	chr11	-	2473	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	28	0	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_7	78.9567782999419	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4431	False	NA	-5	True	AATAAA	-18	NA	94544762	94535821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
Isoform_65644_316	chr7	-	844	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	194	9	5	3	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2245	False	NA	-9	True	AATAAA	-18	NA	79882367	79876903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_65646_32	chr7	-	987	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	48	12	-34	0	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2099	False	NA	-12	True	AATAAA	-15	NA	79882513	79876906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_65647_9	chr7	-	838	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	305.980130073833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2213	False	NA	-12	True	AATAAA	-15	NA	79882399	79876906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882257
Isoform_65648_13	chr7	-	694	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	8	0	8	0	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2248	False	NA	-12	True	AATAAA	-15	NA	79882364	79876906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
Isoform_65650_9	chr7	-	810	6	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	164	680	-25	5	5prime_fragment	FALSE	canonical	3	721	junction_1	52.8446780669539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGAACTTCTGGTTT	2215	False	NA	NA	False	NA	NA	NA	79882397	79877574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_65651_4	chr7	-	920	6	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	54	680	-28	5	5prime_fragment	FALSE	canonical	3	721	junction_1	52.8446780669539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGAACTTCTGGTTT	2105	False	NA	NA	False	NA	NA	NA	79882507	79877574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
Isoform_65652_3	chr7	-	1921	9	FSM	ENSMUSG00000038930.12	ENSMUST00000047362.11	3336	9	262	1153	-9	0	multi-exon	FALSE	canonical	3	15	junction_3	12.4197423483742	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGACAAAGCTTACAAG	NA	False	NA	NA	False	NA	NA	NA	79973910	79966490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970447_79970609_79970930_79971024_79971092_79973497
Isoform_65653_5	chr7	-	914	3	ISM	ENSMUSG00000030533.17	ENSMUST00000238999.2	3180	20	13689	-2	13084	1	3prime_fragment	FALSE	canonical	3	89	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79976230	79975041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_79975626_79975760_79975917_79976056
Isoform_65656_211	chr7	-	3243	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	18	-1	0	1	multi-exon	TRUE	canonical	3	61	junction_19	11.9833679753749	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79989949	79975041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
Isoform_65657_8	chr7	-	3289	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	-28	-1	-28	1	multi-exon	FALSE	canonical	3	61	junction_19	11.9833679753749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79989995	79975041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
Isoform_65658_140	chr7	-	3198	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCTGTTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	79989949	79975041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
Isoform_65659_17	chr7	-	3278	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79990031	79975043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
Isoform_65660_5	chr7	-	1322	9	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	5605	-10	-1378	0	3prime_fragment	FALSE	canonical	2	3	junction_5	4.31385848168435	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTGATATTGACATGTG	NA	False	NA	-9	True	AATAAA	-15	NA	80031562	80027510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348
Isoform_65662_6	chr7	-	4214	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	66	6	66	-4	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCCCGGTCTCCAGT	3745	False	NA	-6	True	ATTAAA	-16	NA	80052444	80038947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
Isoform_65663_5	chr7	-	607	3	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	15	58059	15	-38914	5prime_fragment	FALSE	canonical	3	378	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAAAAAGACTAAGAGA	NA	False	NA	NA	False	NA	NA	NA	80184852	80162799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_80163243_80164336_80164439_80184790
Isoform_65664_5	chr7	-	3568	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-29	1576	-29	-1576	multi-exon	TRUE	canonical	0	0	junction_3	5.85757838102026	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	1568	False	NA	NA	False	NA	NA	NA	80338654	80237950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
Isoform_65669_6	chr7	-	7292	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	150	2	-3	-2	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453014	80361332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
Isoform_65677_5	chr7	-	2512	19	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	118	28147	-17	1348	5prime_fragment	FALSE	canonical	3	539	junction_18	41.2443785919015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGAGTGTGTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	80453046	80389477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
Isoform_6568_227	chr11	-	3398	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	49	-5	49	5	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTTGTTTGCTTCCTG	2254	False	NA	-1	True	AATATA	-21	NA	94568292	94554671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_65683_4	chr7	-	2552	7	FSM	ENSMUSG00000025722.17	ENSMUST00000139990.8	2549	7	-2	-1	0	0	multi-exon	FALSE	canonical	3	120	junction_4	7.94599829404014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550982	80540470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
Isoform_65685_26	chr7	-	2079	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	35	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550982	80540470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_65686_67	chr7	-	1543	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	35	536	0	2	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATTAGCAATTTACT	NA	False	NA	-5	True	AATAAA	-22	NA	80550982	80541006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_65687_3	chr7	-	1929	6	NIC	ENSMUSG00000025722.17	novel	2549	7	NA	NA	0	4	intron_retention	FALSE	canonical	3	13	junction_4	49.9935995903476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAGCAATTTACTTA	NA	False	NA	-3	True	AATAAA	-24	NA	80550982	80541004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391
Isoform_65688_11	chr7	-	1454	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATTAGCAATTTACT	NA	False	NA	-5	True	AATAAA	-22	NA	80550982	80541006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
Isoform_65689_4	chr7	-	3087	6	FSM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	-3	-4	-3	4	multi-exon	FALSE	canonical	3	120	junction_3	8.49941174435031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAGCAATTTACTTA	NA	False	NA	-3	True	AATAAA	-24	NA	80550985	80541004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
Isoform_65690_7	chr7	-	2615	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	-2	529	0	8	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCAATTTACTTAGTTT	NA	False	NA	1	True	AATAAA	-28	NA	80550982	80541000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
Isoform_65691_5	chr7	-	646	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	57	2	41	-2	multi-exon	FALSE	canonical	2	13	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTCTGGGCCTCTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	80554767	80551977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80552252_80553881_80554055_80554568
Isoform_65692_260	chr7	-	922	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	235	188	0	1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCAGTGTTTGTATT	1620	False	NA	-10	True	ATTAAA	-12	NA	80597293	80565312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_65693_65	chr7	-	1109	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	235	1	0	-1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTTCCCTGAATTCTG	1620	False	NA	-6	True	AATAAA	-17	NA	80597293	80565125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_65695_13	chr7	-	1183	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	-26	188	-26	1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCAGTGTTTGTATT	1359	False	NA	-10	True	ATTAAA	-12	NA	80597554	80565312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_65697_5	chr7	-	1334	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	8	3	8	-3	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCCTTTCCCTGAATTC	1393	False	NA	-8	True	AATAAA	-15	NA	80597520	80565127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
Isoform_657_3	chr10	-	5766	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-20	5	-20	-5	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGACTTTGATGTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	12424643	12257938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
Isoform_6570_6	chr11	-	2958	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	24	460	24	276	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGTGCAATAGGGCTC	2229	False	NA	NA	False	ATTAAA	-18	NA	94568317	94555136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_65703_3721	chr7	-	462	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	26	6	-1	1	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	3721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTTGTCTGTATTG	NA	False	NA	-16	True	AATAAA	-6	NA	80994976	80992486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
Isoform_65704_145	chr7	-	532	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	-44	6	-44	1	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTTGTCTGTATTG	NA	False	NA	-16	True	AATAAA	-6	NA	80995046	80992486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
Isoform_65710_7	chr7	-	3173	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	-64	2	-64	0	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104570	80996775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_65712_9	chr7	-	3142	12	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104554	80996775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
Isoform_65713_4	chr7	-	3234	12	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	18.2548533114207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81105224	80996775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
Isoform_65714_3	chr7	-	2579	18	ISM	ENSMUSG00000062444.16	ENSMUST00000238711.2	3230	25	16750	-233	1481	-1	3prime_fragment	FALSE	canonical	3	56	junction_15	11.7210956418324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCACCTTTCCTT	NA	False	NA	0	True	AATAAA	-16	NA	81126677	81110147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488
Isoform_65715_7	chr7	-	3499	23	ISM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	9139	3	5024	-3	3prime_fragment	FALSE	canonical	3	56	junction_15	11.3023803533987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81134534	81110149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173
Isoform_65717_32	chr7	-	3659	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	NA	False	NA	-1	True	AATAAA	-15	NA	81139558	81110148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
Isoform_65718_33	chr7	-	3592	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	214	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	7854	False	NA	1	True	AATAAA	-17	NA	81143459	81110146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
Isoform_65720_7	chr7	-	3799	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	7	0	7	0	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	7647	False	NA	1	True	AATAAA	-17	NA	81143666	81110146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
Isoform_65721_3	chr7	-	582	3	ISM	ENSMUSG00000061877.14	ENSMUST00000144156.2	640	6	2475	-2	2465	2	3prime_fragment	FALSE	canonical	1	3	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGATGTTGGAGGTTCT	5759	False	NA	NA	False	ATTAAA	-18	NA	81145554	81144020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_81144127_81144873_81145122_81145326
Isoform_65722_12	chr7	-	2122	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	1	-387	1	387	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATATAAGCAGAACTTAG	NA	False	NA	NA	False	NA	NA	NA	81356691	81259090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_65723_21	chr7	-	1718	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	3	15	3	-15	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATAATTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	81356689	81259492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_65724_5	chr7	-	1790	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-69	15	-69	-15	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATAATTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	81356761	81259492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_65725_8	chr7	-	2175	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-154	-387	-19	387	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATATAAGCAGAACTTAG	NA	False	NA	NA	False	NA	NA	NA	81356711	81259090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_65726_22	chr7	-	1762	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-143	15	-8	-15	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATAATTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	81356700	81259492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
Isoform_65727_7	chr7	-	976	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTAGCAGTTTCGAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	81439213	81431930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
Isoform_65728_7	chr7	-	875	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-102	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439213	81432031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
Isoform_65729_28	chr7	-	772	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	102	0	-102	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439213	81432031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_6573_7	chr11	-	3973	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	35	-1	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGTCCTTGTTTGC	2240	False	NA	-7	True	AATATA	-15	NA	94568306	94554677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
Isoform_65730_7	chr7	-	873	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTAGCAGTTTCGAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	81439213	81431930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_65731_12	chr7	-	3134	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479205	81441821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
Isoform_65733_220	chr7	-	3035	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-34	0	-34	0	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479213	81441821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
Isoform_65740_27	chr7	-	2420	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-184	2	-184	-2	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCGTGGGCTTATGTGCT	NA	False	NA	-9	True	AATAAA	-16	NA	83801285	83758565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_83760010_83763458_83763639_83800489
Isoform_65746_53	chr7	-	1416	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	156	13	-57	-13	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCACAGAAATCTCTGT	NA	False	NA	-17	True	AATAAA	-19	NA	84254994	84234379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
Isoform_65747_8	chr7	-	1539	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	33	13	-5	-13	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCACAGAAATCTCTGT	NA	False	NA	-17	True	AATAAA	-19	NA	84255117	84234379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
Isoform_65749_6	chr7	-	1509	7	NIC	ENSMUSG00000030629.16	novel	792	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	272.686429601638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGCTACGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	84328575	84264262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84328517
Isoform_6575_11	chr11	-	2268	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-22	0	-22	0	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	6052	False	NA	-1	True	NA	NA	NA	94932202	94917083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
Isoform_65750_38	chr7	-	1587	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339087	84264260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
Isoform_65752_12	chr7	-	1751	8	FSM	ENSMUSG00000030629.16	ENSMUST00000209165.2	967	8	4	-788	4	1	multi-exon	FALSE	canonical	3	64	junction_6	270.713795702534	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339087	84264260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
Isoform_65753_16	chr7	-	1538	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	-1	1	-1	-1	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGCTACGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	84328601	84264262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
Isoform_65754_192	chr7	-	1590	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	78	1287	4	1	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339087	84264260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
Isoform_65756_11	chr7	-	1684	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	-15	1286	-13	2	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCTACGTTTCCCT	NA	False	NA	NA	False	AATAAA	-15	NA	84339180	84264259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
Isoform_65762_24	chr7	-	2870	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	21	809	-6	-809	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTTGCATCAGCACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	88987974	88789730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
Isoform_65763_22	chr7	-	3360	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	23	317	-4	-317	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTGCATTTCTGTGAG	NA	False	NA	-9	True	AGTAAA	-14	NA	88987972	88789238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
Isoform_65768_61	chr7	-	1063	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	2	1159	2	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590410	89567895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_6577_10	chr11	-	4857	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	3	1	3	-1	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8875	False	NA	-1	True	AATAAA	-21	NA	94967537	94935300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
Isoform_65770_157	chr7	-	1012	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	53	1159	12	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590359	89567895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_65772_9	chr7	-	2171	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	53	0	12	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	False	NA	-14	True	AATAAA	-17	NA	89590359	89566736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
Isoform_65777_112	chr7	-	774	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	48	-16	12	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590359	89567895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
Isoform_65778_24	chr7	-	812	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	10	-16	10	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590397	89567895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
Isoform_6578_3	chr11	-	4957	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	-97	1	-10	-1	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	-1	True	AATAAA	-21	NA	94967637	94935300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
Isoform_65781_5	chr7	-	860	4	FSM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	-25	0	12	0	multi-exon	FALSE	canonical	3	43	junction_2	457.818741425032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590359	89567895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89568216_89569280_89569400_89584934_89585173_89590176
Isoform_65783_754	chr7	-	1971	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	10	79	10	-73	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630174	89603940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65784_74	chr7	-	2088	12	FSM	ENSMUSG00000030619.11	ENSMUST00000107234.3	2067	12	-14	-7	-14	7	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTATTTACTTTGAAG	NA	False	NA	5	True	AATAAA	-40	NA	89630205	89603854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65785_223	chr7	-	2027	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	10	23	10	-17	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTGTAATGTTTAC	NA	False	NA	-25	True	AATAAA	-10	NA	89630174	89603884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65787_235	chr7	-	1644	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	417	-1	0	1	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAAAGCTATTTACT	NA	False	NA	-1	True	AATAAA	-34	NA	89629767	89603860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_6580_441	chr11	-	3518	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	42	0	-3	0	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201030	95165084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_65802_141	chr7	-	1882	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	10	-73	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630174	89603940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65803_168	chr7	-	1475	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	-73	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89629767	89603940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65804_41	chr7	-	1962	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAAAGCTATTTACT	NA	False	NA	-1	True	AATAAA	-34	NA	89630174	89603860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65805_50	chr7	-	1539	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTTTACTTTAACTC	NA	False	NA	-17	True	AATAAA	-18	NA	89629767	89603876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
Isoform_65817_221	chr7	-	756	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	32	11	11	1	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1677	False	NA	NA	False	AATAAA	-8	NA	90106405	90099918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
Isoform_6582_181	chr11	-	3428	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	42	0	-3	0	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201030	95165084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_65820_22	chr7	-	740	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	5	11	5	1	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTTGTCTGCAACA	1671	False	NA	NA	False	AATAAA	-8	NA	90106411	90099918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
Isoform_65821_6	chr7	-	1809	4	NIC	ENSMUSG00000030615.13	novel	466	4	NA	NA	6	0	intron_retention	FALSE	canonical	3	739	junction_3	32.6904675198546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1672	False	NA	NA	False	AATAAA	-7	NA	90106410	90099919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_90100144_90100750_90102109_90104631_90104728_90106279
Isoform_65823_33	chr7	-	2246	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	7	6	1	-6	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGAATGCATGGAGG	6027	False	NA	NA	False	NA	NA	NA	90125202	90116651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
Isoform_65828_6	chr7	-	2740	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	41	1	1	-1	multi-exon	FALSE	canonical	2	2	junction_3	4.22702834093188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATGTACTACTACTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	92286309	92233391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
Isoform_65830_5	chr7	-	2693	9	ISM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	41	20438	1	316	5prime_fragment	FALSE	canonical	2	4	junction_3	3.40725329260975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGAGCCTCCGGGTAAC	NA	False	NA	NA	False	NA	NA	NA	92286309	92253828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
Isoform_65832_4	chr7	-	1458	5	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	2	18090	2	6551	5prime_fragment	FALSE	canonical	3	78	junction_4	28.1513765205185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACTTGAAAAATCAAGA	NA	False	NA	NA	False	AAAACA	-15	NA	92319140	92310840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
Isoform_65834_26	chr7	-	3447	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	14	-2621	9	-3	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTTTTTGTTATAA	NA	False	NA	-4	True	AGTAAA	-15	NA	92523431	92506735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
Isoform_65836_24	chr7	-	3369	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	15	3	0	-3	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTTTTTGTTATAA	NA	False	NA	-4	True	AGTAAA	-15	NA	92523440	92506735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
Isoform_65838_3	chr7	-	4268	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	-33	27	-33	-1	multi-exon	FALSE	canonical	2	4	junction_5	1.83303027798234	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCAGGATGCTGTT	NA	False	NA	-1	True	AATAAA	-15	NA	96981260	96958613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
Isoform_65839_9	chr7	-	1070	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	191	16	-20	-16	multi-exon	FALSE	canonical	3	27	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAAAGGAAAACATG	NA	False	NA	-22	True	NA	NA	NA	97066746	97062160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97062723_97066238
Isoform_6584_89	chr11	-	3411	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201030	95165084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_65840_10	chr7	-	867	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	14	2	0	-2	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTTGAGAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	97228689	97199548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
Isoform_65841_21	chr7	-	767	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	11	11	0	-2	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTTGAGAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	97228693	97199548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
Isoform_65844_4	chr7	-	2776	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	213	748	-138	-748	multi-exon	FALSE	canonical	3	30	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97387283	97373960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_65845_8	chr7	-	1155	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	210	2372	-141	1	multi-exon	FALSE	canonical	3	30	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTAGTAACTGTGATG	NA	False	NA	0	True	ATTAAA	-44	NA	97387286	97375584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_65846_12	chr7	-	1088	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	277	2372	-74	1	multi-exon	FALSE	canonical	3	30	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTAGTAACTGTGATG	NA	False	NA	0	True	ATTAAA	-44	NA	97387219	97375584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97375912_97378177_97378295_97386575
Isoform_65847_3	chr7	-	4362	12	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	129	-2094	-3	-8	3prime_fragment	FALSE	canonical	3	136	junction_9	15.0651477817495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97811420	97770773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122
Isoform_65848_87	chr7	-	4429	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	62	7	62	-7	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97827419	97770772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
Isoform_6585_31	chr11	-	3321	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	258.98824244012	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201030	95165084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
Isoform_65850_28	chr7	-	4459	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	33	6	33	-6	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	97827448	97770771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
Isoform_65858_8	chr7	-	3877	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	41	7422	9	-153	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTTTTGGAAGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	97958704	97863017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_65859_78	chr7	-	1301	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	-2	10041	-2	13	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATATCCAGATGGT	NA	False	NA	-35	True	ATTAAA	-29	NA	97958747	97865636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
Isoform_65862_9	chr7	-	2667	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	-48	1	-8	-1	multi-exon	FALSE	canonical	2	4	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCATTTGCTGACAAAT	NA	False	NA	1	True	AATAAA	-29	NA	98010543	97999875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98002338_98008564_98008675_98010448
Isoform_65863_45	chr7	-	2508	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	1	-199	1	-1	multi-exon	FALSE	canonical	3	40	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCATTTGCTGACAAAT	NA	False	NA	1	True	AATAAA	-29	NA	98010494	97999875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98002338_98010448
Isoform_65864_34	chr7	-	2620	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-112	-198	-72	-2	multi-exon	FALSE	canonical	3	40	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGCATTTGCTGACAAA	NA	False	NA	0	True	AATAAA	-28	NA	98010607	97999876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98002338_98010448
Isoform_65867_60	chr7	-	3431	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	0	1726	0	3	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTTCCCCCCCAGCTT	NA	False	NA	-15	True	AATAAA	-22	NA	98790348	98535953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
Isoform_6587_6	chr11	-	2242	2	FSM	ENSMUSG00000046719.8	ENSMUST00000058866.8	2099	2	-143	0	-143	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATTCTAAGTAATCCAG	NA	False	NA	1	True	AATAAA	-20	NA	95405539	95400670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95402359_95404985
Isoform_65871_3	chr7	-	3390	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGATTTCCCCCCCAGC	NA	False	NA	-17	True	AATAAA	-20	NA	98790344	98535955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
Isoform_65873_117	chr7	-	2263	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831927	98802864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
Isoform_65874_3	chr7	-	1716	5	ISM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	5901	1	5876	-1	3prime_fragment	FALSE	canonical	3	105	junction_3	4.43705983732471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTTTTCTCTCTC	NA	False	NA	-2	True	AATAAA	-19	NA	98881925	98868291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664
Isoform_65875_115	chr7	-	1777	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	2	1	2	-1	multi-exon	FALSE	canonical	3	105	junction_3	4.4	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTTTTCTCTCTC	NA	False	NA	-2	True	AATAAA	-19	NA	98887824	98868291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
Isoform_65877_3	chr7	-	2315	5	NIC	ENSMUSG00000052396.8	novel	1780	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	105	junction_2	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCCCTTCTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-17	NA	98887824	98868293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_98869167_98871459_98872375_98872707_98872913_98881664_98881844_98887681
Isoform_6588_12	chr11	-	2143	2	FSM	ENSMUSG00000046719.8	ENSMUST00000058866.8	2099	2	-51	7	-51	-7	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTATTCTATTCTAAGT	NA	False	NA	-6	True	AATAAA	-13	NA	95405447	95400677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95402359_95404985
Isoform_65889_88	chr7	-	2087	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	0	41	0	-41	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTATAGGTGTGTGAA	NA	False	NA	43	True	AATAAA	-13	NA	99002321	98994642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
Isoform_6589_629	chr11	-	3400	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	37	9	37	-9	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACGATGC	NA	False	NA	NA	False	ATTAAA	-6	NA	95478524	95459652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
Isoform_65893_56	chr7	-	2221	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	0	53	0	-34	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGTGTGAAAGCAGAT	NA	False	NA	50	True	AATAAA	-20	NA	99002321	98994635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
Isoform_65898_86	chr7	-	2062	5	NIC	ENSMUSG00000070436.13	novel	2274	5	NA	NA	38	-33	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	649.473777376731	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002166	98994634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002093
Isoform_659_12	chr10	-	3032	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	-150	337453	-150	1	5prime_fragment	TRUE	canonical	2	9	junction_16	3.78487245697539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTGAAGGTAAAA	NA	False	NA	NA	False	AATATA	-28	NA	12745259	12596576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_65903_3388	chr7	-	2049	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	125	41	0	-35	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	3388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTGTGTGAAAGCAGA	NA	False	NA	49	True	AATAAA	-19	NA	99002321	98994636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_65904_501	chr7	-	2087	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	89	39	-36	-33	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002357	98994634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_65905_112	chr7	-	2168	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	1	46	1	-40	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTATAGGTGTGTGAAA	NA	False	NA	44	True	AATAAA	-14	NA	99002445	98994641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_65906_369	chr7	-	2093	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	125	-3	0	3	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTAAGACAAAGCCT	NA	False	NA	93	True	ATTAAA	-20	NA	99002321	98994592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
Isoform_65921_11160	chr7	-	829	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	86	993	-1	4	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	11160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGGCCTGACTGGAT	8421	False	NA	-41	True	AATAAA	-29	NA	99132859	99128095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
Isoform_65929_3	chr7	-	3335	3	FSM	ENSMUSG00000035239.7	ENSMUST00000036331.7	3341	3	3	3	3	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCTTGGAGTGAGTTA	6028	False	NA	NA	False	AATAAA	-12	NA	99477621	99460648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_99463515_99472528_99472741_99477364
Isoform_6593_4	chr11	-	3008	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	-40	-1246	-40	1246	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	2850	False	NA	NA	False	NA	NA	NA	95805757	95755522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
Isoform_65934_238	chr7	-	698	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	92	2119	-9	-3	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCCTTCTGCTGGA	NA	False	NA	-9	True	AATAAA	-14	NA	99508092	99488894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
Isoform_65938_225	chr7	-	1480	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	92	1337	-9	-2	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGAGTCTTGAAAGA	NA	False	NA	-5	True	AATAAA	-16	NA	99508092	99488112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
Isoform_65942_240	chr7	-	2990	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	79	0	-20	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770693	99731317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
Isoform_65946_10	chr7	-	2933	11	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	178.454924280615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770692	99731317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99770570
Isoform_65947_65	chr7	-	2993	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_4	154.789059343876	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770693	99731317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
Isoform_65951_121	chr7	-	2413	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	105	junction_12	74.9147049500395	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	100021155	99975943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
Isoform_65952_180	chr7	-	2372	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	105	junction_12	74.9147049500395	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	100021114	99975943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
Isoform_65954_3	chr7	-	680	3	ISM	ENSMUSG00000030708.15	ENSMUST00000054923.9	847	7	6967	-63	6967	5	3prime_fragment	FALSE	canonical	3	56	junction_2	3	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGGAAGTGAGTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	100154021	100152222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_100152518_100153122_100153200_100153713
Isoform_65955_12	chr7	-	972	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1603	-10	-15	10	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTGAGTTGGAGGGA	NA	False	NA	1	True	AATAAA	-23	NA	100161003	100152217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
Isoform_65956_18	chr7	-	811	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3000	-67	-15	7	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGAAGTGAGTTGGAG	NA	False	NA	-2	True	AATAAA	-20	NA	100161003	100152220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
Isoform_65957_5	chr7	-	2108	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3000	-1364	-15	-1	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTACTGTGCCATACAC	NA	False	NA	NA	False	NA	NA	NA	100161003	100150923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
Isoform_65958_259	chr7	-	889	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	27	3369	0	117	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	100232282	100198326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
Isoform_65959_3	chr7	-	1904	8	FSM	ENSMUSG00000030701.18	ENSMUST00000116287.9	1911	8	8	-1	8	0	multi-exon	FALSE	canonical	1	2	junction_3	7.51868420968044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGCTTTGCTTGTTTT	NA	False	NA	-1	True	AATAAA	-17	NA	100307655	100293105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100294277_100294776_100294877_100299134_100299240_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
Isoform_65960_3	chr7	-	1796	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	10	0	10	0	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGCTTTGCTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	100307653	100293106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
Isoform_65961_13	chr7	-	2646	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	16	-323	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2222	False	NA	-3	True	AATAAA	-15	NA	100512589	100495376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
Isoform_65962_76	chr7	-	2488	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	40	323	0	-323	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2198	False	NA	-3	True	AATAAA	-15	NA	100512613	100495376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_65963_7	chr7	-	2835	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	16	0	16	0	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGAGCTTTTTTTCTGT	2174	False	NA	NA	False	NA	NA	NA	100512637	100495053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_65964_4	chr7	-	2410	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	-4	-323	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	13.2310894636482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2194	False	NA	-3	True	AATAAA	-15	NA	100512617	100495376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
Isoform_65965_6	chr7	-	2542	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	0	469	0	-9	multi-exon	FALSE	canonical	2	2	junction_1	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCCTGAAAAATCAACA	3103	False	NA	NA	False	AATACA	-18	NA	100661205	100646243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100648308_100652770_100652962_100660918
Isoform_65966_4	chr7	-	2126	18	FSM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	37	4296	0	0	multi-exon	FALSE	canonical	2	4	junction_10	9.70606060442378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCCTCTTTGAAGCA	8414	False	NA	-2	True	NA	NA	NA	100951258	100938823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
Isoform_65967_29	chr7	-	2065	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	20	-2	0	2	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTCTTTGAAGCATT	8414	False	NA	0	True	NA	NA	NA	100951258	100938821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
Isoform_65971_22	chr7	-	4727	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-18	21	-18	-7	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487028	101471866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
Isoform_65972_7	chr7	-	5288	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_28	28.1340631655664	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487028	101471866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
Isoform_65973_4	chr7	-	4615	28	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-40	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3932567353139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAATAAAGGAAAAG	NA	False	NA	26	True	AATAAA	-15	NA	101487050	101471866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
Isoform_65975_9	chr7	-	958	4	FSM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	-16	18	-16	-18	multi-exon	FALSE	canonical	3	303	junction_2	18.9267594221045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCCTTATGAATTATT	8082	False	NA	-18	True	AATAAA	-13	NA	101513368	101507555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131
Isoform_65978_10	chr7	-	1217	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1958	20	-58	-20	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGTGCCTTATGAATTA	3518	False	NA	-20	True	AATAAA	-11	NA	101517932	101507557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
Isoform_65979_10	chr7	-	1187	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1994	14	-22	-14	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTATGAATTATTTGGG	3554	False	NA	-14	True	AATAAA	-17	NA	101517896	101507551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
Isoform_65981_18	chr7	-	1139	6	ISM	ENSMUSG00000001827.13	ENSMUST00000106983.8	1307	7	1465	7	-1	-7	3prime_fragment	FALSE	canonical	3	52	junction_5	108.542341968469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTATTTGGGTGTGAAT	2920	False	NA	-7	True	AATAAA	-24	NA	101518530	101507544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517675_101518363
Isoform_65983_6	chr7	-	1101	6	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	-28	-16	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	123.544971569061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTATGAATTATTTG	3197	False	NA	-16	True	AATAAA	-15	NA	101518253	101507553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518199
Isoform_65984_26	chr7	-	1230	6	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1360	0	-1	0	3prime_fragment	FALSE	canonical	3	40	junction_5	113.141327550988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	2920	False	NA	0	True	AATAAA	-31	NA	101518530	101507537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518363
Isoform_65985_5	chr7	-	1048	4	NIC	ENSMUSG00000064307.14	novel	821	5	NA	NA	0	-1	intron_retention	FALSE	canonical	2	8	junction_3	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCCTGTACCTTGTTAA	2525	False	NA	NA	False	AATAAA	-27	NA	101583075	101562191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101562791_101564768_101564975_101569843_101569982_101582970
Isoform_65986_4	chr7	-	2183	9	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	14	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	120.056692337412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-28	NA	101714351	101668349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
Isoform_65987_3	chr7	-	2306	9	NIC	ENSMUSG00000070426.13	novel	2344	9	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	149.430585891912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACGCATTTGCCTTTTT	NA	False	NA	-9	True	AATAAA	-25	NA	101714678	101668352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714473
Isoform_65988_3	chr7	-	2554	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	-311	6	0	-6	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-28	NA	101714676	101668349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
Isoform_65989_100	chr7	-	2226	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	17	6	17	-6	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCATTTGCCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-28	NA	101714348	101668349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
Isoform_65991_9	chr7	-	2356	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	-12	0	-3	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-31	NA	101714676	101668346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
Isoform_65993_23	chr7	-	4037	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-8	-281	0	6	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGGAAAATCCATTCTA	9996	False	NA	1	True	AATAAA	-21	NA	101859357	101783403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_65994_4	chr7	-	3915	22	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	29.4626093799229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTCAGGAAAATCCATT	9974	False	NA	-2	True	AATAAA	-18	NA	101859379	101783406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_65996_3	chr7	-	3356	19	NIC	ENSMUSG00000063550.9	novel	3132	20	NA	NA	-2	363	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	31.503527139389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCAAGT	9994	False	NA	NA	False	NA	NA	NA	101859359	101794171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
Isoform_65997_10	chr7	-	1284	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6345	False	NA	-2	True	AATAAA	-18	NA	101899345	101888329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_101889520_101899251
Isoform_65998_6	chr7	-	2792	9	NNC	ENSMUSG00000030966.14	novel	2793	8	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.53257399408268	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTCTTTCATTCTACC	NA	False	NA	NA	False	AATAAA	-16	NA	102214722	102207127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_102207783_102207812_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
Isoform_66_83	ERCC-00079	+	627	1	FSM	ERCC-00079A	DQ883652	628	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00079_+_0_600
Isoform_660_4	chr10	-	3108	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	-226	337453	-226	1	5prime_fragment	FALSE	canonical	2	9	junction_16	3.78487245697539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTGAAGGTAAAA	NA	False	NA	NA	False	AATATA	-28	NA	12745335	12596576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_66000_12	chr7	-	2382	7	FSM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	8	-2	8	2	multi-exon	FALSE	canonical	2	5	junction_6	1.21335164821342	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACGAGTCTGCCTGTC	NA	False	NA	NA	False	ATTAAA	-30	NA	102336526	102326786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254_102333719_102336347
Isoform_66001_5	chr7	-	2517	8	FSM	ENSMUSG00000057143.16	ENSMUST00000130139.3	2484	8	-72	39	-48	-39	multi-exon	FALSE	canonical	0	0	junction_3	1.9059520091609	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-37	NA	104002617	103989121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_103990581_103990825_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
Isoform_66004_39	chr7	-	3533	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049209	105027818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66005_18	chr7	-	3565	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049239	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66006_128	chr7	-	3443	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049209	105027817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_66007_22	chr7	-	3476	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-32	-1	-2	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049241	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_66009_13	chr7	-	3518	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	4	-1	4	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049235	105027817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66010_34	chr7	-	3493	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	30	-2	0	0	multi-exon	TRUE	canonical	3	82	junction_12	109.388038905337	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049209	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66012_120	chr7	-	3410	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	44	7399	1	0	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049217	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_66015_5	chr7	-	2948	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	123.258845749729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049218	105027818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66016_16	chr7	-	2855	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	1	-1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049214	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_66017_7	chr7	-	2903	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	122.831184965382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049215	105027818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
Isoform_66018_17	chr7	-	2819	12	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	116.391402937184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049220	105027816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
Isoform_66019_6	chr7	-	2767	15	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	53.8097555831502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230453	105207690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105224636_105224752_105230341
Isoform_66020_376	chr7	-	2633	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	264	-19	-35	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230434	105207690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
Isoform_66021_4	chr7	-	2575	14	FSM	ENSMUSG00000037032.17	ENSMUST00000191011.7	2712	14	136	1	-26	0	multi-exon	FALSE	canonical	1	8	junction_13	40.0285401141316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230724	105207690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230689
Isoform_66022_8	chr7	-	3044	13	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	43	0	intron_retention	FALSE	canonical	3	128	junction_3	10.9417650414466	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230442	105207690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
Isoform_66024_27	chr7	-	2886	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	-47	2	-13	0	multi-exon	FALSE	canonical	3	39	junction_9	7.22140985754018	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282791	105259856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
Isoform_66025_11	chr7	-	2858	12	FSM	ENSMUSG00000036989.17	ENSMUST00000057525.14	3016	12	-25	183	-14	-3	multi-exon	FALSE	canonical	3	8	junction_11	13.9497326613206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282792	105259859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
Isoform_66026_5	chr7	-	2852	12	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	16.03560088889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282765	105259859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282583
Isoform_66027_3	chr7	-	3986	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_8	16.4632925018053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTTGCTAGGTTCT	NA	False	NA	-5	True	AATAAA	-12	NA	105282762	105259859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282583
Isoform_66028_7	chr7	-	1801	9	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	49.1030485306157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289543	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105286933_105287069_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66029_5	chr7	-	3383	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGTTTTTATTGTAT	NA	False	NA	NA	False	NA	NA	NA	105289569	105283414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66030_42	chr7	-	1960	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66031_21	chr7	-	1987	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	31	-3	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289592	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66032_7	chr7	-	1731	8	FSM	ENSMUSG00000030881.16	ENSMUST00000084782.10	2254	8	15	508	-1	-3	multi-exon	FALSE	canonical	1	5	junction_7	43.718953999101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289543	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288633_105289451
Isoform_66033_18	chr7	-	3206	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	69	0	4	0	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTATTGTATTGTAC	NA	False	NA	NA	False	NA	NA	NA	105289554	105283409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66034_137	chr7	-	1793	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	58	1424	-7	-3	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66035_41	chr7	-	1823	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	28	1424	28	-3	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289595	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66037_15	chr7	-	2210	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCCCAGTGAGGTC	NA	False	NA	NA	False	AATAAA	-10	NA	105289565	105284833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66038_7	chr7	-	2270	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	105289619	105284827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66040_4	chr7	-	3667	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	26	1	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTATTGTATTGTACC	NA	False	NA	NA	False	NA	NA	NA	105289597	105283408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
Isoform_66041_212	chr7	-	2230	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	346	477	-62	197	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9925	False	NA	-10	True	AATAAA	-14	NA	105385642	105381413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
Isoform_66042_63	chr7	-	2294	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	282	477	-126	197	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9861	False	NA	-10	True	AATAAA	-14	NA	105385706	105381413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
Isoform_66051_573	chr7	-	758	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	22	3501	3	2	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6461	False	NA	-28	True	AATAAA	-17	NA	105393546	105392100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
Isoform_66052_12	chr7	-	4274	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	18	-11	-1	11	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGACATATATTTTATAA	6457	False	NA	-1	True	AATAAA	-31	NA	105393550	105388588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
Isoform_66054_6	chr7	-	640	4	NIC	ENSMUSG00000043866.12	novel	4281	5	NA	NA	6	2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	566.488795613431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6464	False	NA	-28	True	AATAAA	-17	NA	105393543	105392100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105392271_105392634_105392700_105393036_105393192_105393293
Isoform_66059_9	chr7	-	3528	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	22	8	0	-8	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTCTGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	105401420	105394025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
Isoform_66060_94	chr7	-	2419	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	26	1113	4	-5	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGCTTGAGTGATTT	NA	False	NA	-1	True	AATAAA	-25	NA	105401416	105395130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
Isoform_66063_5	chr7	-	2293	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	89.1434909764649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTGCTTGAGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	105401432	105395132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105401188_105401261_105401377
Isoform_66067_294	chr7	-	802	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	23	6475	23	-1	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTGACTTTCTTGTCC	NA	False	NA	-29	True	GATAAA	-19	NA	105460283	105458887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66068_554	chr7	-	731	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6475	-6	-1	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTGACTTTCTTGTCC	NA	False	NA	-29	True	GATAAA	-19	NA	105460212	105458887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66069_183	chr7	-	829	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6377	-6	74	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGGTCTAGTTTTGC	NA	False	NA	-7	True	AGTAAA	-19	NA	105460212	105458789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66070_55	chr7	-	1095	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6111	-6	340	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGCTCAGTTTGCTTA	NA	False	NA	-1	True	NA	NA	NA	105460212	105458523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66071_81	chr7	-	881	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	42	6377	-29	74	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGGTCTAGTTTTGC	NA	False	NA	-7	True	AGTAAA	-19	NA	105460264	105458789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66072_14	chr7	-	886	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	-63	6477	-63	-3	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATATTGACTTTCTTGT	NA	False	NA	-31	True	GATAAA	-17	NA	105460369	105458889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66073_28	chr7	-	1139	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	49	6112	-22	339	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGCTCAGTTTGCTT	NA	False	NA	-2	True	NA	NA	NA	105460257	105458524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_105459352_105459656_105459726_105460014
Isoform_66076_3	chr7	-	1301	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.77651506998175	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTCACAATGTGTGGATA	NA	False	NA	-6	True	AATAAA	-18	NA	107357202	107349172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
Isoform_66077_6	chr7	-	2107	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	3	1	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACAATGTGTGGATATG	NA	False	NA	-4	True	AATAAA	-20	NA	107357236	107349170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
Isoform_66078_3	chr7	-	1890	5	FSM	ENSMUSG00000048330.15	ENSMUST00000133876.2	3258	5	-3	1371	-3	-1371	multi-exon	FALSE	canonical	3	56	junction_3	4.55521678957215	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAATATAATTGCATC	NA	False	NA	NA	False	ATTAAA	-15	NA	108682521	108645959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
Isoform_66079_50	chr7	-	960	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	58	-106	58	3	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGCATTGTTCACAT	NA	False	NA	-1	True	ATTAAA	-21	NA	108774356	108737775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
Isoform_6608_538	chr11	-	2377	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	705	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95873437	95853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
Isoform_66081_9	chr7	-	2222	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51201	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCCTCACGTGTCC	NA	False	NA	-12	True	AATAAA	-28	NA	108986823	108878427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
Isoform_66082_10	chr7	-	1705	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51255	1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAGTCCCTCACGTGTC	NA	False	NA	-13	True	AATAAA	-27	NA	108986769	108878428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
Isoform_66086_5	chr7	-	4446	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	166	0	-34	0	multi-exon	TRUE	canonical	3	89	junction_19	35.017605386157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215794	109123126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
Isoform_66087_6	chr7	-	4292	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302790	109123126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
Isoform_66088_16	chr7	-	3062	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	59.0346628070525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302811	109123126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264_109216355_109302744
Isoform_66090_51	chr7	-	1686	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	16	1	16	-1	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTTTCTGTTCTCCA	NA	False	NA	1	True	AATAAA	-18	NA	109351470	109335041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
Isoform_66092_3	chr7	-	2469	7	FSM	ENSMUSG00000034825.15	ENSMUST00000033331.7	3910	7	0	1441	0	-1441	multi-exon	FALSE	canonical	2	8	junction_6	3.54338193757822	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	109380752	109358706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506
Isoform_66093_3	chr7	-	3516	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	17	30	17	-30	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109464869	109397926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
Isoform_66094_3	chr7	-	2178	10	ISM	ENSMUSG00000035901.15	ENSMUST00000106722.2	4862	22	54642	-5	-5294	5	3prime_fragment	FALSE	canonical	3	151	junction_8	12.3648246606609	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCACTGGCTTTCATGG	NA	False	NA	NA	False	AATAAA	-20	NA	109504965	109492981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902
Isoform_66097_4	chr7	-	2411	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	221	1208	19	90	multi-exon	TRUE	canonical	3	346	junction_6	24.644133852366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAGTTAAACACATAGAT	NA	False	NA	85	True	GATAAA	-19	NA	109585437	109572601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_66099_52	chr7	-	2346	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	192	1302	0	-4	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGTATCTGTCTTC	NA	False	NA	-9	True	AATACA	-17	NA	109585466	109572695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_661_18	chr10	-	2725	18	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	151	337459	151	-5	5prime_fragment	FALSE	canonical	2	9	junction_16	3.78487245697539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAAAAGAAATTGAAG	NA	False	NA	NA	False	AATATA	-22	NA	12744958	12596582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
Isoform_66104_5	chr7	-	2042	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	139	1659	-25	-361	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCATGCATGATACATCT	NA	False	NA	-14	True	ATTAAA	-18	NA	109585519	109573052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
Isoform_66106_8	chr7	-	3227	24	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	3	11510	combination_of_known_junctions	TRUE	canonical	3	22	junction_23	20.9463262227681	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAACACCTCCT	NA	False	NA	NA	False	NA	NA	NA	110214118	109964952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
Isoform_66107_37	chr7	-	3232	24	ISM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	7	57724	1	11510	5prime_fragment	FALSE	canonical	3	82	junction_16	12.0559502208573	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAACACCTCCT	NA	False	NA	NA	False	NA	NA	NA	110214120	109964952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
Isoform_66108_3	chr7	-	3353	25	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-2	11510	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	30.1855086184672	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAACACCTCCT	NA	False	NA	NA	False	NA	NA	NA	110214123	109964952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110144527_110144646_110159464_110159554_110213913
Isoform_66110_15	chr7	-	3986	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	45	1	-10	-1	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443619	110412738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
Isoform_66134_4200	chr7	-	3789	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	4182	11	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	4200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_66135_188	chr7	-	3823	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	-10	4182	-10	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682247	110671138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_66136_186	chr7	-	4992	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	2979	11	1203	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682213	110669935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_6615_3669	chr11	-	2813	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-3	5568	-3	705	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896769	95853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_66157_965	chr7	-	3675	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	11	0	11	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
Isoform_66175_16	chr7	-	3270	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	631	5	631	-5	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	-6	True	AATAAA	-18	NA	111757633	111715228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
Isoform_66177_3	chr7	-	3181	6	NIC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	633	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.3971960779912	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGTCCATGGTATG	NA	False	NA	-9	True	AATAAA	-15	NA	111757631	111715231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111749817_111749956_111757389
Isoform_66178_50	chr7	-	2584	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	-22	19	-22	1	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTGACCAACTTTAT	NA	False	NA	-18	True	AATAAA	-15	NA	112968568	112914851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
Isoform_66180_30	chr7	-	2447	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTGACCAACTTTAT	NA	False	NA	-18	True	AATAAA	-15	NA	112968589	112914851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
Isoform_66181_31	chr7	-	2372	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	20	2	20	1	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTGACCAACTTTAT	NA	False	NA	-18	True	AATAAA	-15	NA	112968579	112914851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
Isoform_66183_148	chr7	-	2266	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	7	2	7	1	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGACGCTTGACGGCTCCT	NA	False	NA	-3	True	ATTAAA	-19	NA	113717009	113646018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
Isoform_66184_4	chr7	-	1701	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	-21	595	-21	-592	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAAGCTGTTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	113717037	113646611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
Isoform_66188_271	chr7	-	3334	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	10	2	10	-2	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATCTGTGGGATTT	NA	False	NA	-9	True	AATAAA	-14	NA	113853936	113814795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
Isoform_6619_116	chr11	-	3009	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-199	5568	-199	705	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896965	95853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_66194_4	chr7	-	2454	5	NNC	ENSMUSG00000030754.10	novel	2302	2	NA	NA	7	4835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.340428159693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACGAAAG	NA	False	NA	NA	False	AATAGA	-11	NA	113853939	113846203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_113846574_113846607_113848213_113849280_113849511_113853104_113853255_113853840
Isoform_66199_1023	chr7	-	1134	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	65	2	1	-2	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875288	113863842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_66200_139	chr7	-	1178	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	21	2	21	-2	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875332	113863842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_66202_25	chr7	-	1311	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	41	-151	-10	151	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTATGTAGACTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	113875312	113863689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
Isoform_66205_4	chr7	-	961	5	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	37.532485928859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCAAGTGGAGTCTTT	2082	False	NA	-9	True	ATTAAA	-18	NA	114235544	114230721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235422
Isoform_66206_42	chr7	-	942	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	48	4	-2	-4	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGGAGTCTTTGCTGT	2082	False	NA	-4	True	ATTAAA	-23	NA	114235544	114230716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
Isoform_66207_6	chr7	-	1000	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	-16	10	-16	-10	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTCAAGTGGAGTCTT	2018	False	NA	-10	True	ATTAAA	-17	NA	114235608	114230722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
Isoform_66208_6	chr7	-	2811	4	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	87	junction_3	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGAGTCTTTGCTGTT	2082	False	NA	-3	True	ATTAAA	-24	NA	114235544	114230715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_114231141_114231650_114233844_114234361_114234457_114235446
Isoform_66209_7	chr7	-	823	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	3	4	-2	-4	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTGAACCATGGTG	2082	False	NA	NA	False	AATAAA	-12	NA	114235544	114232531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
Isoform_66211_42	chr7	-	5132	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	22	-5	1	-3	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCTCTTGCTGGCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	115907589	115722722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
Isoform_66215_12	chr7	-	4614	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	2	-1140	2	-2	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGATTGGCGTGGTTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	115907588	115733027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
Isoform_66216_3	chr7	-	3490	21	ISM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	7	1622	7	-1622	5prime_fragment	FALSE	canonical	3	231	junction_9	19.8017675978686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACATACATGTA	NA	False	NA	NA	False	NA	NA	NA	115907583	115735789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
Isoform_66218_8	chr7	-	898	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	-315	6	-315	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGTTTTGTGGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	115933745	115930745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
Isoform_66219_749	chr7	-	538	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	45	6	-15	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGTTTTGTGGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	115933385	115930745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
Isoform_66224_1843	chr7	-	459	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	28	4692	28	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715383	117708286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
Isoform_66225_606	chr7	-	490	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	-3	4692	-3	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715414	117708286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
Isoform_66228_599	chr7	-	2076	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	86	9	0	-9	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCACTTTCTTTGT	NA	False	NA	-20	True	ATTAAA	-16	NA	117728799	117718122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
Isoform_66236_8	chr7	-	4122	26	ISM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	8	49080	-6	10370	5prime_fragment	TRUE	canonical	3	32	junction_2	6.67532770731145	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAGAAAAAATAGGTAT	NA	False	NA	NA	False	NA	NA	NA	117842852	117779610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
Isoform_66238_11	chr7	-	1994	12	ISM	ENSMUSG00000030655.16	ENSMUST00000208209.2	2287	13	-58	1667	-11	1148	5prime_fragment	FALSE	canonical	3	33	junction_4	6.09023062707063	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAGGTAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	117842904	117794269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
Isoform_66239_5	chr7	-	2927	8	NIC	ENSMUSG00000058420.9	novel	2957	8	NA	NA	32	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.16653584115759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTTATCTATTTTGTT	NA	False	NA	0	True	AATAAA	-24	NA	118047410	117979935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055_118033676_118036045_118036195_118041570_118041720_118042341_118042360_118047036
Isoform_66240_223	chr7	-	864	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	50	0	-5	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6675	False	NA	-2	True	AATAAA	-16	NA	118132529	118124284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
Isoform_66244_7	chr7	-	4511	17	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	106	junction_9	15.9813123287795	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTGTTGGGTGCGTGT	4156	False	NA	-4	True	AATAAA	-16	NA	118183947	118135065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_118136779_118136799_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
Isoform_66246_7	chr7	-	1538	6	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	-2	-12	combination_of_known_junctions	TRUE	canonical	3	76	junction_5	166.218410532648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGGGCAAACTGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	118304973	118287779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297950_118304612
Isoform_66247_222	chr7	-	1572	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	-2	12	-2	-12	multi-exon	FALSE	canonical	3	428	junction_5	40.804901666344	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGGGCAAACTGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	118305003	118287779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
Isoform_66249_9	chr7	-	1513	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	326	3543	12	-264	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGCATTTCTTGATC	NA	False	NA	-9	True	ATTAAA	-18	NA	118454895	118444987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
Isoform_66250_9	chr7	-	5053	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	329	0	15	0	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454892	118441444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
Isoform_66257_60	chr7	-	2912	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	3	1603	3	-641	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCTCTGCTGTGTCC	NA	False	NA	-4	True	AATAAA	-18	NA	118594431	118572872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_66258_17	chr7	-	4521	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	1	-4	1	4	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCGTGGTAGCTTGTCA	NA	False	NA	1	True	AATAAA	-19	NA	118594433	118571265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
Isoform_66264_484	chr7	-	2551	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	136	2	102	-2	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGCATTCTTTTTTA	NA	False	NA	-3	True	AATAAA	-18	NA	119319885	119314317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
Isoform_66265_111	chr7	-	2666	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	21	2	-13	-2	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGCATTCTTTTTTA	NA	False	NA	-3	True	AATAAA	-18	NA	119320000	119314317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
Isoform_66275_9	chr7	-	3493	9	FSM	ENSMUSG00000030929.18	ENSMUST00000033224.14	3487	9	-3	-3	-3	3	multi-exon	FALSE	canonical	3	9	junction_7	22.8965062837106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTTGATGCCTTG	NA	False	NA	3	True	AATAAA	-39	NA	119393208	119383046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391567_119391653_119391722_119393140
Isoform_66276_46	chr7	-	3471	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	77	16	1	-3	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGACATGTAGAACATC	NA	False	NA	-20	True	AATAAA	-16	NA	119393204	119383069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
Isoform_66278_5	chr7	-	735	3	NIC	ENSMUSG00000030929.18	novel	973	9	NA	NA	0	-4284	intron_retention	FALSE	canonical	3	81	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAATATAAA	NA	False	NA	NA	False	NA	NA	NA	119393190	119390000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_119390452_119391487_119391722_119393140
Isoform_66279_6	chr7	-	2869	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-32	-2207	-32	20	multi-exon	FALSE	canonical	3	12	junction_2	52.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAGTGTCTATTAAAT	NA	False	NA	13	True	AATAAA	-36	NA	119461087	119455008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119457280_119458602_119459139_119461025
Isoform_66280_19	chr7	-	2963	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	33	2989	33	21	multi-exon	FALSE	canonical	3	85	junction_2	16	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGTGTCTATTAAATA	NA	False	NA	14	True	AATAAA	-37	NA	119494935	119455007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_66282_6	chr7	-	2360	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	2	3623	2	-606	multi-exon	FALSE	canonical	3	85	junction_2	16	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGCGCCCACGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	119494966	119455641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_66283_3	chr7	-	2566	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	-12	3431	-12	-414	multi-exon	FALSE	canonical	3	85	junction_2	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATATATGTATCTATA	NA	False	NA	NA	False	NA	NA	NA	119494980	119455449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119457280_119458602_119459139_119494780
Isoform_66286_6	chr7	-	2878	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	33	9	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTGATACAATGAAAAAGT	NA	False	NA	2	True	AATAAA	-25	NA	119494935	119455019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_119457280_119458602_119459139_119494853
Isoform_66287_7	chr7	-	1277	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	100	6	100	-6	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTCCTTTGACAAC	NA	False	NA	-5	True	AATAAA	-15	NA	119801234	119785608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
Isoform_66288_87	chr7	-	2527	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	-8	6	-8	-6	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGGTCTACGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	120581543	120556264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
Isoform_66289_72	chr7	-	2886	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	17	-1	0	1	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGTTTCCTTCTTCTC	8941	False	NA	1	True	AATAAA	-18	NA	121580917	121522060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
Isoform_66294_1332	chr7	-	2837	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	35	2043	0	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	1332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121620410	121587987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
Isoform_66308_104	chr7	-	1838	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	207	1	14	-1	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTGTTTTGCCTCCA	NA	False	NA	-2	True	TTTAAA	-17	NA	121666279	121638044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_66309_82	chr7	-	2003	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	207	-164	14	164	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	-2	True	NA	NA	NA	121666279	121637879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_66310_6	chr7	-	3448	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	207	-1609	14	1	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAATCTCTAG	NA	False	NA	NA	False	NA	NA	NA	121666279	121636434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_66311_3	chr7	-	2855	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	182	-991	-11	-617	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGGTTTCCTTTCTTCA	NA	False	NA	NA	False	TATAAA	-22	NA	121666304	121637052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_66313_3	chr7	-	2056	9	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	10	164	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	48.4709964824327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	-2	True	NA	NA	NA	121666283	121637879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_121638382_121638934_121639120_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
Isoform_66316_43	chr7	-	675	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	40	2764	5	291	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCATGTGGATCGTTT	6398	False	NA	NA	False	TTTAAA	-28	NA	121701069	121687389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_66322_1236	chr7	-	612	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	23	781	0	-4	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTATTTTTCTCAAT	6416	False	NA	-17	True	AATAAA	-10	NA	121701051	121690059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_66323_54	chr7	-	635	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	0	781	0	-4	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTATTTTTCTCAAT	6393	False	NA	-17	True	AATAAA	-10	NA	121701074	121690059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_66326_40	chr7	-	3739	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	8	3	8	0	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732161	121706487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_66328_16	chr7	-	2653	13	FSM	ENSMUSG00000044702.14	ENSMUST00000106469.8	2559	13	-94	0	8	0	multi-exon	FALSE	canonical	3	13	junction_9	41.4242950721219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732161	121706484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_66329_7	chr7	-	1975	12	NIC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	40.7258522479556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGCTTGGCTTGTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	121732159	121706489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121727360_121727667_121728145_121728240_121728896_121728957_121731942
Isoform_66330_55	chr7	-	3399	21	NIC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969126	122878496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66331_9	chr7	-	3105	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-25	-220	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTACTTCCTGCTAC	NA	False	NA	-7	True	AATAAA	-15	NA	122969163	122878827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66332_5	chr7	-	3507	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-96	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969234	122878496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66333_3	chr7	-	3341	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGCTAATTCTTA	NA	False	NA	-7	True	ATTAAA	-19	NA	122969111	122878499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
Isoform_66334_4	chr7	-	3257	18	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-26048	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	50.9133873394869	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122921861	122878496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122921634
Isoform_66335_5	chr7	-	3152	20	FSM	ENSMUSG00000030766.16	ENSMUST00000205262.2	3036	20	-7	-109	-6	-1	multi-exon	FALSE	canonical	0	0	junction_19	60.4560690757234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGCTAATTCTTAG	NA	False	NA	-6	True	ATTAAA	-20	NA	122969115	122878498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66336_4	chr7	-	3431	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-101	6	-72	-2	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGCTAATTCTTA	NA	False	NA	-7	True	ATTAAA	-19	NA	122969210	122878499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66337_20	chr7	-	3338	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-7	5	-7	-1	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGCTAATTCTTAG	NA	False	NA	-6	True	ATTAAA	-20	NA	122969116	122878498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
Isoform_66338_5	chr7	-	3740	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-131	4222	-131	536	multi-exon	FALSE	canonical	1	4	junction_1	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAGGCTAATGCTATT	NA	False	NA	NA	False	AATAAA	-13	NA	123099803	123078828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
Isoform_66340_411	chr7	-	962	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	153	5	-44	-5	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGGCTTGTGTGAGGT	NA	False	NA	-16	True	AGTAAA	-28	NA	125090615	125066816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
Isoform_66341_6	chr7	-	1025	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	77	18	77	-18	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCTCTGTAATCCAGG	NA	False	NA	-29	True	AGTAAA	-15	NA	125090691	125066829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
Isoform_66344_8	chr7	-	6880	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	75	6	-28	-6	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTACGTTGTGTATTGGC	NA	False	NA	-5	True	ATTAAA	-10	NA	125306877	125240131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
Isoform_66351_43	chr7	-	4476	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	-25	4	-11	1	multi-exon	FALSE	canonical	3	58	junction_14	102.701045398272	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799605	125700891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_66352_10	chr7	-	4534	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	-83	4	10	1	multi-exon	FALSE	canonical	3	58	junction_14	102.701045398272	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799663	125700891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_66353_5	chr7	-	4527	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	144.586743475634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACTAGTGATGGGGCA	NA	False	NA	NA	False	AATAAA	-21	NA	125799621	125700893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_66356_278	chr7	-	4476	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	71	5	-8	1	multi-exon	TRUE	canonical	3	436	junction_21	38.8223134638356	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799602	125700891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_66357_75	chr7	-	4533	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	13	6	13	0	multi-exon	FALSE	canonical	3	436	junction_21	38.8223134638356	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799660	125700892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
Isoform_66360_4	chr7	-	1227	12	NIC	ENSMUSG00000030742.8	novel	1235	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	13.1689592452595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGTCGTTGTCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	125968742	125963000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967713_125967973_125968009_125968113_125968142_125968319
Isoform_66361_28	chr7	-	1258	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	-26	3	10	-3	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGTCGTTGTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	125968732	125963001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
Isoform_66364_937	chr7	-	2180	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	31	8	2	-1	multi-exon	FALSE	canonical	3	348	junction_9	48.6508899292612	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976591	125969239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
Isoform_66365_91	chr7	-	2212	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	0	7	0	0	multi-exon	FALSE	canonical	3	348	junction_9	48.6508899292612	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
Isoform_66368_31	chr7	-	2113	13	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_12	122.006830409886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
Isoform_66370_13	chr7	-	3178	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	376	junction_6	42.5305772356783	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
Isoform_66371_19	chr7	-	2033	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	13	junction_8	135.864785724631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
Isoform_66377_271	chr7	-	3370	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	19	-1	19	1	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995890	125982024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_66382_13	chr7	-	3459	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-2	intron_retention	FALSE	canonical	3	215	junction_6	22.8892259953601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGCTGGTTTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	125995892	125982027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_66384_13	chr7	-	3122	6	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	94.5101052798059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995897	125982024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125984312_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
Isoform_66388_13	chr7	-	3404	10	FSM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	-10	-1	-10	-1	multi-exon	FALSE	canonical	3	29	junction_9	100.767548176147	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8194	False	NA	-2	True	AATAAA	-27	NA	126074285	126066166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
Isoform_66390_69	chr7	-	3026	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8194	False	NA	-3	True	AATAAA	-26	NA	126074285	126066167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_66394_4	chr7	-	3312	11	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	104.43892952343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8197	False	NA	-4	True	AATAAA	-25	NA	126074282	126066168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072994_126074167
Isoform_66395_25	chr7	-	3334	10	FSM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	34	-2	-6	-1	multi-exon	FALSE	canonical	3	29	junction_9	82.2103595046059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8211	False	NA	-2	True	AATAAA	-27	NA	126074268	126066166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
Isoform_66398_227	chr7	-	2973	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGGCTGTGGCTGATA	8192	False	NA	-5	True	AATAAA	-24	NA	126074287	126066169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_664_26	chr10	-	2258	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	41	-2	41	2	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGAGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	13068871	13053881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
Isoform_66400_11	chr7	-	3025	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	72	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	86.4935593120617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	7955	False	NA	-1	True	AATAAA	-28	NA	126074524	126066165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074356
Isoform_66401_6	chr7	-	3389	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-10	2	intron_retention	FALSE	canonical	3	198	junction_8	37.1247895616931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCATGATGGCTGTGGC	8194	False	NA	-10	True	AATAAA	-19	NA	126074285	126066174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_66402_4	chr7	-	2920	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205497.2	2854	9	-59	-7	-6	-1	multi-exon	FALSE	canonical	2	5	junction_1	88.9690957580215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGGCTGTGGCTGATA	8198	False	NA	-5	True	AATAAA	-24	NA	126074281	126066169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_66403_4	chr7	-	2883	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	89.9012479056882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8185	False	NA	-2	True	AATAAA	-27	NA	126074294	126066166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
Isoform_66406_15	chr7	-	3499	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	102	3	combination_of_known_splicesites	FALSE	canonical	3	143	junction_23	266.578786716817	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7344	False	NA	-4	True	NA	NA	NA	126101170	126090883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66408_14	chr7	-	3566	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	256.034939723406	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6935	False	NA	-3	True	NA	NA	NA	126101579	126090882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_66410_4	chr7	-	3528	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	91	3	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	303.426562184232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7333	False	NA	-4	True	NA	NA	NA	126101181	126090883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66412_4	chr7	-	3708	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	96	3	intron_retention	FALSE	canonical	3	143	junction_22	237.014331609778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7338	False	NA	-4	True	NA	NA	NA	126101176	126090883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66413_7	chr7	-	3762	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	-4	intron_retention	FALSE	canonical	3	238	junction_22	223.990522416087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACTTAACCTGCCTAT	6934	False	NA	-11	True	NA	NA	NA	126101580	126090890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_66416_6	chr7	-	3426	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	253.996551027537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7258	False	NA	-3	True	NA	NA	NA	126101256	126090882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66421_99	chr7	-	3947	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	90	3	intron_retention	FALSE	canonical	3	143	junction_21	199.099617268271	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7332	False	NA	-4	True	NA	NA	NA	126101182	126090883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66422_19	chr7	-	4038	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	-3	intron_retention	FALSE	canonical	3	143	junction_21	199.099617268271	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7242	False	NA	-3	True	NA	NA	NA	126101272	126090882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_66424_10	chr7	-	3918	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	238	junction_21	181.885750689423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7019	False	NA	-3	True	NA	NA	NA	126101495	126090882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_66425_4	chr7	-	4407	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	21	-3	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9435	False	NA	-3	True	NA	NA	NA	126102588	126090882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
Isoform_66429_9	chr7	-	4001	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	56	-2	intron_retention	FALSE	canonical	3	137	junction_12	256.469311880599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTATGGGTTTGAT	7298	False	NA	-2	True	NA	NA	NA	126101216	126090881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
Isoform_6643_255	chr11	-	2374	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95873437	95853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
Isoform_66430_9	chr7	-	4020	22	FSM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	9	-6	9	-1	multi-exon	FALSE	canonical	3	137	junction_12	243.863600773697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	6937	False	NA	-1	True	NA	NA	NA	126101577	126090880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
Isoform_66453_140	chr7	-	3014	20	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	41	456	-12	-456	intron_retention	FALSE	canonical	3	1924	junction_14	261.383841247645	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165542	126146082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
Isoform_66457_703	chr7	-	2920	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	7	456	7	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165576	126146082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_66458_1093	chr7	-	2886	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	41	456	-12	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165542	126146082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_66460_35	chr7	-	3336	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	37	10	-16	-10	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	126165546	126145636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
Isoform_66475_33	chr7	-	1707	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	-7	686	-7	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182426	126171257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
Isoform_66476_5	chr7	-	1820	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	707	686	-7	0	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182745	126171257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
Isoform_66477_21	chr7	-	1608	16	ISM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	918	687	0	-1	3prime_fragment	FALSE	canonical	3	45	junction_15	32.0638252379358	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182534	126171258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
Isoform_66478_4	chr7	-	1947	17	FSM	ENSMUSG00000030720.17	ENSMUST00000116269.9	2487	17	-146	686	-119	0	multi-exon	FALSE	canonical	3	21	junction_16	42.5708508694623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183598	126171257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345
Isoform_66479_5	chr7	-	1849	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-83	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	50.8134521599864	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTGTGCAGTCTC	NA	False	NA	-4	True	AATAAA	-16	NA	126184041	126171259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
Isoform_66480_3	chr7	-	1580	16	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_15	37.9013925279211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182501	126171257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182273_126182474
Isoform_66481_9	chr7	-	1601	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	-31	1	5	-1	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182393	126171258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
Isoform_66482_4	chr7	-	2030	16	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-118	-1	intron_retention	FALSE	canonical	3	21	junction_15	43.86565348374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126183597	126171258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345
Isoform_66485_1015	chr7	-	643	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	187	-1	-14	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224661	126222419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126222752_126224061_126224206_126224494
Isoform_66487_30	chr7	-	737	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	93	-1	93	1	multi-exon	FALSE	canonical	3	3716	junction_2	16	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224755	126222419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126222752_126224061_126224206_126224494
Isoform_66492_84	chr7	-	1934	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	4	1214	4	-4	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4991	False	NA	NA	False	NA	NA	NA	126294952	126289853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_66493_5	chr7	-	1995	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	-57	1214	-57	-4	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4930	False	NA	NA	False	NA	NA	NA	126295013	126289853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_66496_13	chr7	-	1901	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-75	-436	-15	-4	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4972	False	NA	NA	False	NA	NA	NA	126294971	126289853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
Isoform_66498_6	chr7	-	2124	4	NIC	ENSMUSG00000059772.13	novel	1567	5	NA	NA	1	-4	intron_retention	FALSE	canonical	3	82	junction_2	8.83176086632785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAACAAAAGTTCTA	4988	False	NA	NA	False	NA	NA	NA	126294955	126289853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126291228_126291492_126291832_126291924_126291977_126294596
Isoform_665_470	chr10	-	1798	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	41	458	41	-458	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAATTGGTGTGCTCATT	NA	False	NA	-20	True	GATAAA	-28	NA	13068871	13054341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
Isoform_6650_1573	chr11	-	2808	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-1	705	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	1573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAGAAAAAAAAA	NA	False	NA	5	True	NA	NA	NA	95896767	95853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
Isoform_66506_266	chr7	-	1408	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	-22	14	-22	-14	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5204	False	NA	NA	False	GATAAA	-34	NA	126391534	126385053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
Isoform_66512_3447	chr7	-	1344	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-1	16	-1	-14	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	3447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5069	False	NA	NA	False	GATAAA	-34	NA	126391669	126385053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
Isoform_66514_130	chr7	-	1405	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-62	16	-62	-14	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAATAGACTTA	5008	False	NA	NA	False	GATAAA	-34	NA	126391730	126385053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
Isoform_66538_248	chr7	-	1594	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-43	-2	-14	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398356	126394405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
Isoform_66540_5231	chr7	-	1440	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	71	0	-13	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	5231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398355	126394405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
Isoform_66556_75	chr7	-	2064	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	2	1	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9196	False	NA	-3	True	ATTAAA	-27	NA	126461008	126450755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66557_143	chr7	-	1231	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	206	junction_2	316.419574202949	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9179	False	NA	-5	True	ATTAAA	-14	NA	126461025	126451605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66559_11	chr7	-	1495	9	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_8	362.098894468072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9922	False	NA	-4	True	ATTAAA	-15	NA	126461544	126451604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
Isoform_66562_17	chr7	-	1089	7	FSM	ENSMUSG00000030689.16	ENSMUST00000153764.8	719	7	-121	-249	-5	0	multi-exon	FALSE	canonical	3	53	junction_2	323.952156961487	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9179	False	NA	-4	True	ATTAAA	-15	NA	126461025	126451604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66563_16	chr7	-	1073	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	312.41341022576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9180	False	NA	-5	True	ATTAAA	-14	NA	126461024	126451605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66565_119	chr7	-	1949	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	25	-1	-22	1	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9219	False	NA	-3	True	ATTAAA	-27	NA	126460985	126450755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66566_272	chr7	-	1105	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	20	848	20	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9214	False	NA	-4	True	ATTAAA	-15	NA	126460990	126451604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66567_168	chr7	-	1140	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	-15	848	-5	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9179	False	NA	-4	True	ATTAAA	-15	NA	126461025	126451604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66568_69	chr7	-	1993	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	-21	1	1	-1	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACATGTTTTGTGCTTGG	9173	False	NA	-5	True	ATTAAA	-25	NA	126461031	126450757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
Isoform_66570_47	chr7	-	1403	8	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	292.908775936141	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9922	False	NA	-4	True	ATTAAA	-15	NA	126461544	126451604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
Isoform_66574_4	chr7	-	4712	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	9	-1	9	1	multi-exon	TRUE	canonical	3	55	junction_2	21.6270292703766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGATGTCTCCCTTTT	8442	False	NA	-4	True	AATAAA	-21	NA	126483866	126464848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
Isoform_66577_17	chr7	-	4972	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	15	-2	15	2	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8448	False	NA	NA	False	NA	NA	NA	126483860	126468672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
Isoform_66580_9	chr7	-	716	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	25649	2	22893	-2	3prime_fragment	FALSE	canonical	3	125	junction_3	4.92160768674447	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCCCTCTT	6880	False	NA	-2	True	AATAAA	-19	NA	126588144	126586033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997
Isoform_66584_13	chr7	-	2825	15	NIC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	-29	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	31.9071516517945	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTCTTTTTCCCTCT	NA	False	NA	-3	True	AATAAA	-18	NA	126611066	126586034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126610972
Isoform_66585_199	chr7	-	2781	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	54	2	-17	-2	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCCCTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	126613739	126586033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
Isoform_66587_4	chr7	-	2913	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	-80	4	-80	-4	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTCTTTTTCCCTC	NA	False	NA	-4	True	AATAAA	-17	NA	126613873	126586035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
Isoform_66588_14	chr7	-	2758	15	NNC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	8097	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.9071516517945	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTATGTTTCTTTTTC	NA	False	NA	-8	True	AATAAA	-13	NA	126602940	126586039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126602908
Isoform_66591_38	chr7	-	1383	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	16	13	16	1	multi-exon	FALSE	canonical	3	276	junction_2	10	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCGTGGTGGCGCACGC	9446	False	NA	-33	True	AATAAA	-15	NA	126616508	126614235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126614642_126615371_126615455_126615614
Isoform_66594_48	chr7	-	2419	5	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	292	12	218	-7	intron_retention	FALSE	canonical	0	0	junction_1	321.496014749794	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_66597_9	chr7	-	2607	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	31	12	31	-7	multi-exon	FALSE	canonical	0	0	junction_1	289.408085581588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	287	False	NA	-39	True	AATAAA	-6	NA	126625667	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66599_9	chr7	-	2685	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	-47	12	-1	-7	multi-exon	FALSE	canonical	0	0	junction_1	289.408085581588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	209	False	NA	-39	True	AATAAA	-6	NA	126625745	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66600_22	chr7	-	2519	7	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	310.082784645219	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626215	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_66608_146	chr7	-	2194	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	218	8	218	-7	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
Isoform_66609_57	chr7	-	2234	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	178	8	178	-7	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
Isoform_66613_74	chr7	-	2161	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	178	8	178	-7	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66614_17	chr7	-	2392	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	-53	8	21	-7	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	277	False	NA	-39	True	AATAAA	-6	NA	126625677	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66615_11	chr7	-	2453	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	-114	8	6	-7	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	216	False	NA	-39	True	AATAAA	-6	NA	126625738	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66617_54	chr7	-	2286	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	-11	7	2	-7	multi-exon	FALSE	canonical	3	90	junction_5	257.403496479749	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626207	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_66618_10	chr7	-	2435	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	-160	7	-147	-7	multi-exon	FALSE	canonical	3	90	junction_5	257.403496479749	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626356	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_66620_82	chr7	-	2424	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	-7	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	548	False	NA	-39	True	AATAAA	-6	NA	126625406	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_66621_25	chr7	-	2464	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	178	-7	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	508	False	NA	-39	True	AATAAA	-6	NA	126625446	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
Isoform_66624_10	chr7	-	2689	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	210	False	NA	-39	True	AATAAA	-6	NA	126625744	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
Isoform_66626_12	chr7	-	2630	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	-112	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	241.899944880798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626321	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_66627_55	chr7	-	2487	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	241.899944880798	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACTTGTCTCTGAG	NA	False	NA	-39	True	AATAAA	-6	NA	126626178	126621313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
Isoform_66630_1016	chr7	-	2053	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	64	-2	-1	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7989	False	NA	-4	True	AATACA	-15	NA	126641579	126626900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
Isoform_66632_46	chr7	-	2208	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	712	junction_7	45.9422191453569	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7957	False	NA	-7	True	AATACA	-12	NA	126641611	126626903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
Isoform_66636_10	chr7	-	1712	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	184	154	-1	-154	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTGTTGTTGTTG	NA	False	NA	-6	True	NA	NA	NA	126721214	126706439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
Isoform_66637_44	chr7	-	1211	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	183	656	-2	-656	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATGAGTGGTTGGTAAA	NA	False	NA	1	True	NA	NA	NA	126721215	126706941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
Isoform_66640_15	chr7	-	3323	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	1	29	1	0	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5521	False	NA	-1	True	NA	NA	NA	126795109	126791196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
Isoform_66647_45	chr7	-	2994	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5522	False	NA	-4	True	NA	NA	NA	126795108	126791199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
Isoform_66650_22	chr7	-	2866	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5522	False	NA	-4	True	NA	NA	NA	126795108	126791199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
Isoform_66653_8	chr7	-	2933	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5455	False	NA	-4	True	NA	NA	NA	126795175	126791199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
Isoform_66654_180	chr7	-	2912	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	4	368	4	-3	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5462	False	NA	-4	True	NA	NA	NA	126795168	126791199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_66655_106	chr7	-	2981	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-64	367	-14	-2	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTGGTAATTTAATA	5394	False	NA	-3	True	NA	NA	NA	126795236	126791198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_66656_11	chr7	-	3280	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	4	0	4	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTGTTGTTTTTT	5462	False	NA	-6	True	AATAAA	-13	NA	126795168	126790831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_66657_19	chr7	-	3021	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-102	365	-52	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5356	False	NA	-1	True	NA	NA	NA	126795274	126791196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
Isoform_66668_303	chr7	-	3289	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-14	339	-14	-339	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1528	False	NA	-2	True	AATGAA	-17	NA	126807654	126796969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_66670_114	chr7	-	3521	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-16	109	-16	-109	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAATGTACGTCTCTGT	1526	False	NA	-7	True	NA	NA	NA	126807656	126796739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_66671_5	chr7	-	3322	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-45	337	-45	-337	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCCTTGTTATTTGAAG	1497	False	NA	0	True	AATGAA	-19	NA	126807685	126796967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_66672_18	chr7	-	3626	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-14	2	-14	-2	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGGTCCAGCTCCT	1528	False	NA	NA	False	AGTAAA	-25	NA	126807654	126796632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
Isoform_66676_107	chr7	-	1465	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	41	-20	14	5	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126817629	126813613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
Isoform_66679_1322	chr7	-	630	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	42	4	42	-4	multi-exon	FALSE	canonical	3	3852	junction_1	65	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTCGATTTTTCTT	2532	False	NA	-5	True	AATAAA	-14	NA	126859839	126856134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126856509_126858529_126858641_126859694
Isoform_66680_357	chr7	-	654	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	18	4	18	-4	multi-exon	FALSE	canonical	3	3852	junction_1	65	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTCGATTTTTCTT	2508	False	NA	-5	True	AATAAA	-14	NA	126859863	126856134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126856509_126858529_126858641_126859694
Isoform_66683_10	chr7	-	2533	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	-174	-3	-8	3	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTCCTTAAGATGTGTA	5147	False	NA	2	True	AATAAA	-19	NA	126944769	126941963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126944048_126944320
Isoform_66684_38	chr7	-	2683	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	2	-1	2	1	multi-exon	FALSE	canonical	3	22	junction_2	4	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGATTTCTGCTCCTCA	917	False	NA	NA	False	NA	NA	NA	126975220	126971707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126973871_126974560_126974675_126974814
Isoform_66688_5	chr7	-	2826	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	-10	1062	-10	-46	multi-exon	FALSE	canonical	2	4	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTATTGTATGTTATG	NA	False	NA	NA	False	CATAAA	-15	NA	126986348	126982493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126984803_126985691_126985806_126985945
Isoform_66690_10	chr7	-	2480	3	FSM	ENSMUSG00000045757.7	ENSMUST00000059199.7	2508	3	29	-1	-10	1	multi-exon	FALSE	canonical	2	4	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGATTTCTGCTCCTCA	8630	False	NA	NA	False	AATAAA	-20	NA	127005965	127002838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127004832_127005337_127005452_127005592
Isoform_66691_7	chr7	-	1284	4	FSM	ENSMUSG00000045251.14	ENSMUST00000148483.8	1302	4	16	2	4	0	multi-exon	FALSE	canonical	3	9	junction_3	18.7794213613377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6929	False	NA	-6	True	ATTAAA	-15	NA	127021195	127018140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127018814_127019181_127019278_127020576_127020691_127020794
Isoform_66692_14	chr7	-	1099	4	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	9.62635271879577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	-4	True	ATTAAA	-17	NA	127021194	127018138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020980
Isoform_66693_4	chr7	-	1023	3	NIC	ENSMUSG00000045251.14	novel	492	3	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6890	False	NA	-6	True	ATTAAA	-15	NA	127021234	127018140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127018814_127019181_127019278_127020980
Isoform_66694_4	chr7	-	1108	4	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	22.196095752782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCAGTGTTTTGTGTT	6921	False	NA	-8	True	ATTAAA	-13	NA	127021203	127018142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_127018814_127019181_127019282_127020576_127020691_127020980
Isoform_66695_3	chr7	-	1011	3	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6908	False	NA	-4	True	ATTAAA	-17	NA	127021216	127018138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_127018814_127019181_127019282_127020980
Isoform_66696_6	chr7	-	1293	2	FSM	ENSMUSG00000045251.14	ENSMUST00000136123.8	1298	2	5	0	5	0	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6930	False	NA	-4	True	ATTAAA	-17	NA	127021194	127018138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127018814_127020576
Isoform_66697_7	chr7	-	1187	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6930	False	NA	-6	True	ATTAAA	-15	NA	127021194	127018140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127018814_127020576_127020691_127020794
Isoform_66698_24	chr7	-	1001	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	12	2	5	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6930	False	NA	-6	True	ATTAAA	-15	NA	127021194	127018140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127018814_127020576_127020691_127020980
Isoform_66699_10	chr7	-	913	2	FSM	ENSMUSG00000045251.14	ENSMUST00000126756.2	338	2	-196	-379	-7	0	multi-exon	FALSE	canonical	3	21	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6906	False	NA	-4	True	ATTAAA	-17	NA	127021218	127018138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127018814_127020980
Isoform_667_11	chr10	-	1872	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	-34	459	-34	-459	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068946	13054342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
Isoform_66700_58	chr7	-	1979	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	24	1618	24	1	multi-exon	FALSE	canonical	3	47	junction_1	4.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGTCTTAAAATAATAT	4381	False	NA	-2	True	ATTAAA	-13	NA	127048306	127042925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127044310_127047534_127047649_127047825
Isoform_66701_11	chr7	-	3604	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	14	3	14	-3	multi-exon	FALSE	canonical	3	47	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAATTCTGCTCCTTCTG	4371	False	NA	NA	False	ATTAAA	-11	NA	127048316	127041310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127044310_127047534_127047649_127047825
Isoform_66704_3	chr7	-	1097	2	ISM	ENSMUSG00000048921.12	ENSMUST00000106299.2	1417	4	-151	4116	14	-4116	5prime_fragment	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGCTTGGGGAGAAGA	4371	False	NA	NA	False	NA	NA	NA	127048316	127047042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_127047649_127047825
Isoform_66705_4	chr7	-	3469	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-143	-2435	3	2435	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	127307954	127263532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_66706_333	chr7	-	971	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	160	1	12	-1	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTCATGTCATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	127307945	127304150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_66707_13	chr7	-	1100	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	32	0	32	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127308073	127304149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_66709_9	chr7	-	1178	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	-47	1	-47	-1	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTCATGTCATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	127308152	127304150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
Isoform_66710_15	chr7	-	2829	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	-8	2947	-8	-1	multi-exon	FALSE	canonical	3	42	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTCTGTATTGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	127476008	127465165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_66712_49	chr7	-	2108	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	713	2947	19	-1	multi-exon	FALSE	canonical	3	42	junction_2	4	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTTCTGTATTGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	127475287	127465165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_66713_9	chr7	-	2445	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	720	2603	26	67	multi-exon	FALSE	canonical	3	42	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTATGTGGCTTTGTTT	NA	False	NA	NA	False	ACTAAA	-34	NA	127475280	127464821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_66715_5	chr7	-	2908	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	718	2142	24	528	multi-exon	FALSE	canonical	3	42	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAGAATGGATGA	NA	False	NA	NA	False	NA	NA	NA	127475282	127464360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127466536_127466927_127467597_127475218
Isoform_66717_184	chr7	-	720	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	27	1	27	-1	multi-exon	FALSE	canonical	3	262	junction_2	18.5	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTAGCATATGTCTGC	NA	False	NA	-12	True	AATAAA	-18	NA	127494762	127492235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127492664_127493676_127493787_127494580
Isoform_66719_7	chr7	-	1671	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	71	110	62	-110	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTCTGTGAGATGAA	NA	False	NA	0	True	AATAAA	-31	NA	127529205	127524997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_66720_4	chr7	-	1824	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	-45	73	-45	-73	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATCTCTGCGTACCTC	NA	False	NA	37	True	AATGAA	-13	NA	127529321	127524960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
Isoform_66721_4	chr7	-	2628	2	ISM	ENSMUSG00000070371.12	ENSMUST00000152697.3	1052	5	-3	1	-3	-1	intron_retention	FALSE	canonical	3	106	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534694	127531810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_127532287_127532542
Isoform_66723_9	chr7	-	1283	6	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_4	32.2093154227158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534656	127531809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534618
Isoform_66725_11	chr7	-	1169	5	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534684	127531809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
Isoform_66727_18	chr7	-	1010	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-2	8	-2	-8	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGACACGTGGCTTTG	NA	False	NA	NA	False	AATAAA	-7	NA	127534653	127531817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
Isoform_66728_10	chr7	-	864	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGACACGTGGCTTTG	NA	False	NA	NA	False	AATAAA	-7	NA	127534653	127531817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
Isoform_66729_5	chr7	-	751	4	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	40.8683523306509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534653	127531810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127532287_127532542_127532665_127533681_127533800_127534618
Isoform_66730_462	chr7	-	744	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	131	2925	131	-993	multi-exon	FALSE	canonical	3	1219	junction_2	45	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGGATGTTTTTGCT	NA	False	NA	-5	True	AAAACA	-18	NA	127592908	127591804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127592138_127592286_127592344_127592554
Isoform_66734_10	chr7	-	1289	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	123	2388	123	-456	multi-exon	FALSE	canonical	3	1219	junction_2	45	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGCCTTTTTTTTTTT	NA	False	NA	-4	True	NA	NA	NA	127592916	127591267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127592138_127592286_127592344_127592554
Isoform_66735_13	chr7	-	436	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	65	179	65	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5448	False	NA	-6	True	AATAAA	-14	NA	127805494	127804785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_66736_6	chr7	-	770	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-94	4	-94	-4	multi-exon	FALSE	canonical	3	110	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTCAGTCTTGTGTTAG	5289	False	NA	NA	False	AATACA	-16	NA	127805653	127804610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_66738_11	chr7	-	560	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-59	179	-59	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5324	False	NA	-6	True	AATAAA	-14	NA	127805618	127804785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127804985_127805071_127805209_127805394
Isoform_66739_18	chr7	-	2568	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	59	0	-2	0	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1165	False	NA	-16	True	AGTAAA	-16	NA	127897283	127870550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_66740_4	chr7	-	1676	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	37	914	-24	33	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTTCCTTTTCTGG	1143	False	NA	-2	True	NA	NA	NA	127897305	127871464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_66741_4	chr7	-	1770	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	31	826	-30	-98	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACACCCTCGACTTTA	1137	False	NA	86	True	NA	NA	NA	127897311	127871376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
Isoform_66742_4	chr7	-	680	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	33	-255	33	-9	multi-exon	FALSE	canonical	1	3	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAACCCTTTAGTCA	9784	False	NA	NA	False	ATTAAA	-15	NA	127995376	127975353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127975767_127990687_127990832_127995253
Isoform_66743_4	chr7	-	870	5	FSM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	1	9	1	-9	multi-exon	FALSE	canonical	3	8	junction_4	4.32290411644765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAACCCTTTAGTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	128019896	127975353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082_128006202_128019789
Isoform_66744_67	chr7	-	1855	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-282	7	15	-7	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAATTCTGACTATAAA	NA	False	NA	NA	False	AATAAA	-8	NA	128063361	128044010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_66747_3	chr7	-	2322	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-256	-486	41	1	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGCTTTTACATGGA	NA	False	NA	NA	False	ATTAAA	-13	NA	128063335	128043517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_66749_4	chr7	-	2069	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-1	-488	-1	3	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCTTTTACATGGAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	128063080	128043515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_66750_3	chr7	-	1595	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	351	2505	2	-2	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGACTATAAATTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	128063045	128044005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
Isoform_66751_6	chr7	-	2199	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	5	2062	5	-7	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAATTCTGACTATAAA	NA	False	NA	NA	False	AATAAA	-8	NA	128063371	128044010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_66753_3	chr7	-	1913	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	313	2040	7	15	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATATAATAGGAGAAATG	NA	False	NA	NA	False	AATAAA	-30	NA	128063063	128043988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
Isoform_66754_338	chr7	-	2486	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	1745	-3	1	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGCTGATCACACCATT	3868	False	NA	NA	False	ATTAAA	-16	NA	128342213	128299909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_66755_142	chr7	-	2906	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	1325	-3	1	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCCTTAACTTTT	3868	False	NA	-13	True	NA	NA	NA	128342213	128299489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_66759_46	chr7	-	3708	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	523	-3	-523	multi-exon	TRUE	canonical	3	440	junction_10	48.8278608992858	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTGTCCTAGAACAA	3868	False	NA	0	True	AATAAA	-28	NA	128342213	128298687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
Isoform_66770_12	chr7	-	4692	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-9	2	-9	-2	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTCGGCCGTGGTT	NA	False	NA	-17	True	AATAAA	-14	NA	130121269	129993224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
Isoform_66772_9	chr7	-	4698	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	34	3	-16	-3	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTCGGCCGTGGT	NA	False	NA	-18	True	AATAAA	-13	NA	130121276	129993225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
Isoform_66774_572	chr7	-	1352	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	83	0	83	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149028	130134255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_66775_166	chr7	-	1446	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	-11	0	-11	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149122	130134255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_66776_16	chr7	-	1521	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	-86	0	-86	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149197	130134255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
Isoform_66778_26	chr7	-	2219	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	64	4490	1	476	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTTGTTTCTTCTTTTT	NA	False	NA	1	True	AATAGA	-21	NA	130964424	130944438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
Isoform_66782_6	chr7	-	3293	5	ISM	ENSMUSG00000040177.11	ENSMUST00000208526.2	3703	6	-14	5311	0	2432	5prime_fragment	FALSE	canonical	3	85	junction_4	3.96074487943871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	130964439	130950225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
Isoform_66784_8	chr7	-	2728	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	-13	1715	-13	1	multi-exon	FALSE	canonical	3	63	junction_1	6.97614984548545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCTGTGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	131012263	130992095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
Isoform_66785_3	chr7	-	4077	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	8	345	8	-345	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131012242	130990725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
Isoform_66786_336	chr7	-	2100	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	52	0	52	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	132178075	132159206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
Isoform_66787_156	chr7	-	2142	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	8	2	8	-2	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATGTGAATCTATT	NA	False	NA	-7	True	AATAAA	-22	NA	132178119	132159208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
Isoform_6679_955	chr11	-	2912	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	27	1058	27	-1058	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGCCTGTGGGTGTGG	5494	False	NA	-2	True	AATAAA	-20	NA	95956187	95939315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
Isoform_66791_34	chr7	-	3259	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	6	-1	6	1	multi-exon	FALSE	canonical	3	59	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACGAATTATTCATC	NA	False	NA	NA	False	AATAAA	-18	NA	132201360	132196605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132199546_132201041
Isoform_66793_5	chr7	-	3561	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-28	-269	-28	269	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTCTGGTCTACTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	132201394	132196337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132199546_132201041
Isoform_66794_9	chr7	-	3392	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-129	1	-129	-1	multi-exon	FALSE	canonical	3	59	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTGACGAATTATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	132201495	132196607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132199546_132201041
Isoform_66795_6	chr7	-	5076	5	NIC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132415385	132313812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
Isoform_66797_3	chr7	-	5304	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTGCCTGCGCATG	NA	False	NA	-16	True	AATAAA	-15	NA	132415615	132313814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
Isoform_66798_5	chr7	-	5207	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	-61	1	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGGCTGCCTGCGCAT	NA	False	NA	-17	True	AATAAA	-14	NA	132415519	132313815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
Isoform_66799_9	chr7	-	5126	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	-12	True	AATAAA	-19	NA	132415615	132313810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
Isoform_6680_149	chr11	-	2945	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-6	1058	-6	-1058	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGCCTGTGGGTGTGG	5461	False	NA	-2	True	AATAAA	-20	NA	95956220	95939315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
Isoform_66800_4	chr7	-	4490	4	NIC	ENSMUSG00000030956.16	novel	4341	4	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGCCTGCGCATGGCT	NA	False	NA	-13	True	AATAAA	-18	NA	132415577	132313811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
Isoform_66801_3	chr7	-	4349	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	0	-8	0	2	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGCGCATGGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	132415615	132313808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
Isoform_66802_14	chr7	-	1087	6	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	113.265352160314	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454383	132429190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
Isoform_66805_34	chr7	-	1045	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	57	5	0	-5	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTTTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132454345	132429190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_66806_5	chr7	-	1335	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	4	-232	4	232	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAATGTCTCACTATGA	NA	False	NA	-1	True	ATTAAA	-25	NA	132454398	132428953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
Isoform_66812_455	chr7	-	2322	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	0	-1	0	1	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725096	132589348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_66814_180	chr7	-	2346	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-24	-1	-24	1	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725120	132589348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_66816_49	chr7	-	2933	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	3	-615	3	557	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTGACATTTAAGTACA	NA	False	NA	-13	True	AATAAA	-20	NA	132725093	132588734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
Isoform_66826_53	chr7	-	2520	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725596	132589349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
Isoform_66831_130	chr7	-	2162	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-201	36	0	1	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725096	132589348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
Isoform_66833_36	chr7	-	2186	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-225	36	-24	1	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725120	132589348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
Isoform_66839_18	chr7	-	2361	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	7	True	AGTAAA	-14	NA	132725596	132589348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
Isoform_66843_3	chr7	-	1663	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	222	-123	0	1	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133310788	133287970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
Isoform_66844_3	chr7	-	1807	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	-35	-10	-35	1	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTGAGTATGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	133311045	133288083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
Isoform_66845_3	chr7	-	2042	9	FSM	ENSMUSG00000030979.14	ENSMUST00000135760.8	2189	9	35	112	0	1	multi-exon	FALSE	canonical	3	35	junction_8	13.9821314541096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTGAGTATGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	133310788	133288083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_133288846_133291310_133291410_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
Isoform_66850_18	chr7	-	2898	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTCAATGGGTTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	133378522	133322672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
Isoform_66851_18	chr7	-	2765	11	ISM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	239	101	-201	1	intron_retention	FALSE	canonical	3	326	junction_7	30.1875802276367	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAAATCATT	NA	False	NA	56	True	NA	NA	NA	133361759	133322775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
Isoform_66852_29	chr7	-	2825	11	ISM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	283	-3	-157	-1	3prime_fragment	FALSE	canonical	3	326	junction_7	30.1875802276367	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133361715	133322671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128
Isoform_66857_39	chr7	-	2891	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	109	-2	109	-2	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTCAATGGGTTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	133361889	133322672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
Isoform_66861_9	chr7	-	3067	13	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	132.624993454812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378512	133322670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749_133361882_133378330
Isoform_66863_364	chr7	-	2935	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	20	0	20	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378512	133322670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
Isoform_66873_6	chr7	-	3638	12	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-94	10198	-94	4654	5prime_fragment	FALSE	canonical	3	124	junction_7	16.2078442390107	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCCAGCAAATCT	NA	False	NA	NA	False	NA	NA	NA	135318184	135301710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
Isoform_66875_15	chr7	-	2233	9	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-106	14558	-106	294	5prime_fragment	FALSE	canonical	3	124	junction_4	15.229494410518	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATATAGGGCTTCAGC	NA	False	NA	NA	False	NA	NA	NA	135318196	135306070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
Isoform_66876_10	chr7	-	1285	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-20	-566	1	3	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	-4	True	ATTAAA	-17	NA	137012484	136977299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
Isoform_66879_43	chr7	-	1125	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	6	-5	0	5	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTTGGTGTGTTGT	NA	False	NA	-2	True	ATTAAA	-19	NA	137012485	136977297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
Isoform_66880_5	chr7	-	1383	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	-254	-3	-254	3	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGGCTTGGTGTGTT	NA	False	NA	-4	True	ATTAAA	-17	NA	137012745	136977299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
Isoform_66881_28	chr7	-	1490	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	22	-10	19	0	multi-exon	FALSE	canonical	3	55	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAACTTGTTTTGGGTTTT	NA	False	NA	38	True	NA	NA	NA	138447967	138437551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_138438760_138447685
Isoform_66883_17	chr7	-	2106	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	-350	0	350	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTTATGAT	NA	False	NA	NA	False	NA	NA	NA	138511235	138492214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_66885_3	chr7	-	2501	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	-745	0	745	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	138511235	138491819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_66886_100	chr7	-	1628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511235	138492692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
Isoform_66889_3	chr7	-	1525	5	NIC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	-6	-128	combination_of_known_splicesites	FALSE	canonical	2	23	junction_3	120.771219667601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511214	138492692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_138493690_138496108_138496259_138496338_138496446_138500409_138500558_138511091
Isoform_66890_13	chr7	-	1923	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	-4	-12	-4	12	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCTTCCGTGGTTCTCA	NA	False	NA	3	True	AATAAA	-32	NA	139162717	139159279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
Isoform_66891_86	chr7	-	1290	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-12	21	-5	-21	multi-exon	FALSE	canonical	3	81	junction_2	2	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGGAGCCGTGGCTCC	NA	False	NA	-29	True	AATAAA	-15	NA	139162718	139161156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139161605_139161796_139161970_139162049
Isoform_66894_183	chr7	-	3079	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-78	-41	-12	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616257	139575867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
Isoform_66895_12	chr7	-	2909	18	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-28	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	103.694086947232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCTGTTGTGCATTAT	NA	False	NA	NA	False	NA	NA	NA	139616207	139575913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616082
Isoform_66896_145	chr7	-	2850	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	303	-93	24	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616279	139575867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_66897_23	chr7	-	3120	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	33	-93	33	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616549	139575867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_66898_5	chr7	-	3320	17	FSM	ENSMUSG00000025474.10	ENSMUST00000209930.2	3341	17	-15	36	-12	-8	multi-exon	FALSE	canonical	3	147	junction_16	76.1033169037329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATGGCTGTTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	139616257	139575916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
Isoform_66900_6	chr7	-	3153	17	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	9	-2	intron_retention	FALSE	canonical	3	194	junction_16	65.9151917239114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616294	139575869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
Isoform_66905_3	chr7	-	2076	2	FSM	ENSMUSG00000025469.11	ENSMUST00000172775.4	2070	2	1	-7	1	7	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTGCCTATTGATACG	9990	False	NA	NA	False	AATAAA	-21	NA	139629000	139626279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139628054_139628698
Isoform_66906_9	chr7	-	838	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11227	4	11227	2	3prime_fragment	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTCGTGGTTTCTCTT	9266	False	NA	-5	True	AGTAAA	-13	NA	139650913	139649797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_139649947_139650224
Isoform_66907_9	chr7	-	677	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11391	1	11391	-1	3prime_fragment	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGTGGTTTCTCTTTTG	9430	False	NA	-2	True	AGTAAA	-16	NA	139650749	139649794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_139649947_139650224
Isoform_66908_5	chr7	-	721	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1936	False	NA	-11	True	NA	NA	NA	139681889	139679393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
Isoform_66909_5	chr7	-	791	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	162.288138814887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1580	False	NA	-11	True	NA	NA	NA	139682245	139679393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
Isoform_6691_1640	chr11	-	598	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	0	-2	0	-1	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3530	False	NA	-7	True	NA	NA	NA	95966445	95963813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
Isoform_66910_30	chr7	-	636	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	38	11	0	-7	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1509	False	NA	-11	True	NA	NA	NA	139682316	139679393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
Isoform_66912_3	chr7	-	601	6	NNC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-105	-7	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	171.429752376885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1841	False	NA	-11	True	NA	NA	NA	139681984	139679393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681922
Isoform_66915_950	chr7	-	1492	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	55	10	1	-2	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696334	139685632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
Isoform_6692_1011	chr11	-	558	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	21	4136	21	-1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3500	False	NA	-7	True	NA	NA	NA	95966475	95963813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
Isoform_66924_14	chr7	-	2115	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1613	junction_2	102.834278763887	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTTTTTAAC	NA	False	NA	-2	True	NA	NA	NA	139696325	139685623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
Isoform_66926_42	chr7	-	1451	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	7	2	7	-2	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367758	140357143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
Isoform_66927_8	chr7	-	1382	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	47.3902385596844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367750	140357141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140367648
Isoform_66928_35	chr7	-	2571	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-37	1317	9	-1317	multi-exon	FALSE	canonical	3	50	junction_1	4	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140402082	140390918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140393228_140398500_140398628_140401947
Isoform_66929_43	chr7	-	468	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	808	992	16	3	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140436214	140434298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_6693_713	chr11	-	581	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	-2	4136	-2	-1	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTGCCTGTGCCTGT	3477	False	NA	-7	True	NA	NA	NA	95966498	95963813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
Isoform_66930_34	chr7	-	1445	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	809	14	-16	-14	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAAGTTCCGTGCCCGT	NA	False	NA	-24	True	CATAAA	-17	NA	140436213	140433320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_66931_7	chr7	-	1535	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	-259	992	-6	3	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140437281	140434298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_66932_4	chr7	-	2481	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	-208	-5	45	5	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATGTCTGTGTTCTTG	NA	False	NA	-5	True	CATAAA	-36	NA	140437230	140433301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
Isoform_66933_3	chr7	-	2070	5	NIC	ENSMUSG00000025484.10	novel	769	7	NA	NA	22	-15	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	46.2439185190875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAAGTTCCGTGCCCG	NA	False	NA	-25	True	CATAAA	-16	NA	140437253	140433321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133_140436263_140436676
Isoform_66934_5	chr7	-	615	3	ISM	ENSMUSG00000025484.10	ENSMUST00000210710.2	489	4	1270	-405	10	3	3prime_fragment	FALSE	canonical	3	105	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140436220	140434298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_140434735_140434986_140435079_140436133
Isoform_66935_12	chr7	-	1289	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-15	-6	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTTGGCATCCTGTC	NA	False	NA	-20	True	AATAAA	-8	NA	140461755	140443588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
Isoform_66936_59	chr7	-	1360	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	62.3475919520732	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGCATCCTGTCTC	NA	False	NA	-18	True	AATAAA	-10	NA	140461738	140443586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458051_140461675
Isoform_66937_107	chr7	-	1368	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	44	4	2	-4	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGCATCCTGTCTC	NA	False	NA	-18	True	AATAAA	-10	NA	140461738	140443586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
Isoform_66938_7	chr7	-	1451	7	FSM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	14	-4	1	0	multi-exon	FALSE	canonical	3	24	junction_6	79.4187215543875	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	140462208	140443578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
Isoform_66939_1471	chr7	-	633	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	20	2	20	-2	multi-exon	FALSE	canonical	3	9574	junction_1	0	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGACTCACTGTTCT	NA	False	NA	-14	True	AATAAA	-20	NA	140535880	140534751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140535087_140535582
Isoform_66940_200	chr7	-	660	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535905	140534749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140535087_140535582
Isoform_66943_570	chr7	-	632	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	43	3	43	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140590640	140589501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140589803_140590309
Isoform_66944_208	chr7	-	670	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	5	3	5	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140590678	140589501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140589803_140590309
Isoform_66946_32	chr7	-	1772	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	19.9616917069288	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676754	140671087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
Isoform_66948_38	chr7	-	1636	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	-22	-2	8	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680477	140671087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
Isoform_66950_23	chr7	-	2096	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-125	0	intron_retention	FALSE	canonical	3	90	junction_8	21.1527185014125	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676777	140671087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
Isoform_66951_4	chr7	-	1973	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	-78	2	-30	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140680515	140671089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
Isoform_66952_5	chr7	-	2446	9	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	1	intron_retention	TRUE	canonical	3	5	junction_8	47.4590283823847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	-29	True	AATAAA	-18	NA	140676754	140671086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140675231_140676532
Isoform_66953_22	chr7	-	3025	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-14	8	-14	-2	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGATGTAGATCC	NA	False	NA	-16	True	AATAAA	-20	NA	140697733	140681132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_66954_3	chr7	-	3246	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	95	junction_6	23.6339238865797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGATGTAGATCC	NA	False	NA	-16	True	AATAAA	-20	NA	140697699	140681132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
Isoform_66957_55	chr7	-	1650	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	7	1	7	1	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748595	140740239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
Isoform_66958_261	chr7	-	1587	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	505	-1	-32	1	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748634	140740239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
Isoform_66959_32	chr7	-	1631	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	461	-1	-76	1	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	140748678	140740239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
Isoform_66961_177	chr7	-	1653	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	4	-1	4	1	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGTCCTTGTCGTTCT	7996	False	NA	NA	False	ATTAAA	-15	NA	140752766	140740239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
Isoform_66963_7	chr7	-	1103	7	NIC	ENSMUSG00000025499.19	novel	2272	6	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCTGGCTGGAAG	NA	False	NA	-4	True	AGTAAA	-16	NA	140773889	140770840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66964_133	chr7	-	1006	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	1	1821	1	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773872	140770838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66966_5	chr7	-	1083	6	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	225.486496269732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTCTCTGGCTGGAA	NA	False	NA	-5	True	AGTAAA	-15	NA	140773919	140770841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140771141_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66967_50	chr7	-	1233	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	47	992	3	0	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773870	140770838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66969_117	chr7	-	1153	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	46	0	1	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773872	140770838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66970_106	chr7	-	1181	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	18	0	7	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773900	140770838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
Isoform_66973_4	chr7	-	518	4	FSM	ENSMUSG00000038580.14	ENSMUST00000167790.3	507	4	-2	-9	0	1	multi-exon	TRUE	canonical	2	4	junction_2	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAGCTCATGGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	140859046	140858241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140858435_140858530_140858636_140858745_140858848_140858928
Isoform_66974_7	chr7	-	2660	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-514	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	38.2536121559155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAATGTTGTCAAGCC	NA	False	NA	-6	True	AATAAA	-25	NA	140908117	140877096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140877530_140881512_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_66975_78	chr7	-	2654	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-521	2	-503	-2	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908106	140877094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_66976_5	chr7	-	2540	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-483	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	42.7906531850123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACCTGAATGTTGTCAAG	NA	False	NA	-8	True	AATAAA	-23	NA	140908086	140877098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
Isoform_66977_193	chr7	-	1468	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	41	389	-5	1	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGTTTT	5478	False	NA	0	True	NA	NA	NA	140994008	140988095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
Isoform_6698_62	chr11	-	1571	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	5	45	3	-45	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTGCTGTGTTGA	4216	False	NA	-7	True	NA	NA	NA	96002785	95990196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
Isoform_66981_13	chr7	-	2280	7	FSM	ENSMUSG00000051007.16	ENSMUST00000156353.8	2348	7	19	49	5	0	multi-exon	FALSE	canonical	3	166	junction_4	10.4721853816033	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5502	False	NA	-1	True	NA	NA	NA	140993984	140988096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140990799_140990898_140991005_140991710_140991788_140993914
Isoform_66983_5	chr7	-	2455	11	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	39.7386461772416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	475	False	NA	-25	True	AATAAA	-12	NA	141017537	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014137_141014213_141014243_141017481
Isoform_66984_13	chr7	-	2536	10	FSM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	4	6	4	1	multi-exon	TRUE	canonical	2	3	junction_9	39.7436228287703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	3509	False	NA	-25	True	AATAAA	-12	NA	141014503	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141014443
Isoform_66985_11	chr7	-	2551	10	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-21	1	intron_retention	FALSE	canonical	3	12	junction_9	37.1154355431208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	2737	False	NA	-25	True	AATAAA	-12	NA	141015275	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141015200
Isoform_66987_94	chr7	-	2528	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	272	11	11	1	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	479	False	NA	-25	True	AATAAA	-12	NA	141017533	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
Isoform_66988_3	chr7	-	2654	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-9	1	intron_retention	TRUE	canonical	0	0	junction_10	49.7127750180977	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	497	False	NA	-25	True	AATAAA	-12	NA	141017515	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016850_141017481
Isoform_66989_5	chr7	-	3134	8	NIC	ENSMUSG00000019082.19	novel	3264	9	NA	NA	-3	1	intron_retention	FALSE	canonical	3	72	junction_7	23.6246153191876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATGCTTGCTTTAAGA	503	False	NA	-25	True	AATAAA	-12	NA	141017509	141009667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
Isoform_66990_3	chr7	-	3245	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	19.9899974987492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023924	141018028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
Isoform_66991_5	chr7	-	3305	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	16.7668986067456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTTGCAGAGATCATT	NA	False	NA	-2	True	NA	NA	NA	141023924	141018026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
Isoform_66993_3	chr7	-	3933	15	FSM	ENSMUSG00000025507.14	ENSMUST00000106005.9	2900	15	-638	-395	-1	-3	multi-exon	FALSE	canonical	3	24	junction_13	13.1049531063017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023906	141018032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
Isoform_66994_34	chr7	-	3340	16	FSM	ENSMUSG00000025507.14	ENSMUST00000026580.12	3357	16	15	2	-2	-2	multi-exon	FALSE	canonical	3	24	junction_13	13.4154140201983	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023923	141018027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
Isoform_66995_4	chr7	-	3406	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	16.9556283673986	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023955	141018032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021774_141022063_141022478_141022880_141023267_141023881
Isoform_66996_393	chr7	-	381	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	1269	0	-1269	multi-exon	FALSE	canonical	3	1072	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCTAACTTCCAAGGT	8000	False	NA	-30	True	AGTAAA	-20	NA	141055045	141053041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141053318_141054940
Isoform_67_27	ERCC-00084	+	977	1	FSM	ERCC-00084A	DQ883682	978	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00084_+_0_1000
Isoform_67000_5	chr7	-	351	2	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-231	-1269	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCTAACTTCCAAGGT	7769	False	NA	-30	True	AGTAAA	-20	NA	141055276	141053041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_141053318_141055201
Isoform_67003_18	chr7	-	2136	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-1	2047	-1	166	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTTTCTGAGATT	NA	False	NA	NA	False	CATAAA	-18	NA	141119730	141075095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_67004_31	chr7	-	1972	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	8	2202	-4	11	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTCACTCCTTCA	NA	False	NA	-11	True	NA	NA	NA	141119721	141075250	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_67005_50	chr7	-	1352	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-3	2833	0	79	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGACAGCTGCTATGG	NA	False	NA	-5	True	AATATA	-18	NA	141119732	141075881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_67009_6	chr7	-	4180	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	0	2	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTCTGGTGTCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	141119729	141073050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
Isoform_67012_30	chr7	-	3729	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	57	2	-15	-2	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTTTTGTTCTTGAGT	2754	False	NA	-7	True	AATAAA	-19	NA	141456167	141435321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
Isoform_67013_70	chr7	-	1517	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	6	-33	5	18	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTTCCTTGTGGT	NA	False	NA	-1	True	NA	NA	NA	141614796	141562253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
Isoform_67015_7	chr7	-	1436	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	3	-481	2	-2	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGTGTCCTCTCAGCC	NA	False	NA	-36	True	AATAAA	-16	NA	141614799	141562288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
Isoform_6702_6	chr11	-	2026	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	5	-410	3	410	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTCCTAGTGAATCACA	4216	False	NA	-19	True	AATAAA	-16	NA	96002785	95989741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
Isoform_67020_2099	chr7	-	1965	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	161	1	-20	-1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	2099	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCTCTGTACTG	8845	False	NA	-3	True	AATAAA	-22	NA	141941614	141929648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
Isoform_6703_32	chr11	-	2223	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	7	321	-4	1	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668350	96658701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
Isoform_67030_22	chr7	-	1640	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-31	-4	-31	4	multi-exon	FALSE	canonical	3	20	junction_1	4	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGTGCCTTGTACCTT	NA	False	NA	-5	True	TATAAA	-19	NA	142523032	142520561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_142521077_142521636_142522437_142522707
Isoform_67031_6	chr7	-	994	4	FSM	ENSMUSG00000059277.13	ENSMUST00000155952.8	2219	4	257	968	-12	-305	multi-exon	FALSE	canonical	2	6	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCTATTAGTTCTG	NA	False	NA	0	True	NA	NA	NA	142607166	142587325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_142587664_142591017_142591119_142598231_142598394_142606773
Isoform_67032_24	chr7	-	738	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	15	4	15	-4	multi-exon	FALSE	canonical	3	98	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGGTCTGTGTA	NA	False	NA	-2	True	AATAAA	-23	NA	143056263	143055285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143055554_143055793
Isoform_67038_768	chr7	-	2254	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	19	12	19	-3	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAACTGAGATTGGTT	NA	False	NA	-13	True	ATTAAA	-8	NA	143102810	143067327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
Isoform_6704_3	chr11	-	2565	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-10	-4	-10	4	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCCCTGGCTGCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	96668367	96658376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
Isoform_67044_752	chr7	-	2245	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	6	8	4	-3	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAACTGAGATTGGTT	NA	False	NA	-13	True	ATTAAA	-8	NA	143102837	143067327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
Isoform_6705_26	chr11	-	2180	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	18	-1	-10	1	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668367	96658701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
Isoform_67054_221	chr7	-	2713	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	34	475	0	1	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153793	143111441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
Isoform_67056_1094	chr7	-	2461	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	0	1	0	-1	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153793	143111444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
Isoform_6706_3	chr11	-	2500	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	23	-326	-5	4	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCCCTGGCTGCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	96668362	96658376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
Isoform_6707_3	chr11	-	2219	8	NNC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.5249622153607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTGTTGCAATTTGT	NA	False	NA	-15	True	AATAAA	-14	NA	96668342	96658701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667729_96667888_96668280
Isoform_67074_4	chr7	-	698	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	-9	1609	-9	924	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGCTTCCTTTTATTGC	NA	False	NA	-3	True	GATAAA	-17	NA	143203407	143192070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_67076_5	chr7	-	4153	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	21	-4	12	2	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTGAATTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	143203377	143188540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_67077_5	chr7	-	623	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	20	3527	11	923	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTAGCTTCCTTTTATTG	NA	False	NA	-4	True	GATAAA	-16	NA	143203378	143192071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
Isoform_67078_3	chr7	-	3783	22	NIC	ENSMUSG00000037606.19	novel	3775	22	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.88441513689613	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTTTTGGGGGAATC	NA	False	NA	NA	False	AATAAA	-14	NA	143310753	143242499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143310672
Isoform_67079_65	chr7	-	2377	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	12	252	-11	14	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATTTTATTATTATA	NA	False	NA	-2	True	TATAAA	-18	NA	143376566	143349572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
Isoform_67080_28	chr7	-	2626	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	12	3	-11	-3	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCTTATTGATGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	143376566	143349323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
Isoform_67088_1482	chr7	-	3021	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	269	-4	5	2	multi-exon	TRUE	canonical	0	0	junction_7	258.149054338875	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATCTTCTGCAGTG	NA	False	NA	-16	True	AATAAA	-18	NA	144024477	143989467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
Isoform_67092_325	chr7	-	2903	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	8	2	8	0	multi-exon	FALSE	canonical	3	340	junction_7	190.956545694956	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024474	143989471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
Isoform_67097_15	chr7	-	5072	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	2	132	junction_22	23.3465570993897	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107477	144030494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
Isoform_67103_27	chr7	-	1528	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	0	2375	0	-2375	multi-exon	FALSE	canonical	3	26	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTGGGTGTGATA	NA	False	NA	-6	True	AATAAA	-20	NA	144136200	144133429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_144134598_144135840
Isoform_67104_9	chr7	-	4381	25	ISM	ENSMUSG00000031075.20	ENSMUST00000121758.8	4552	26	59641	113	-17	-109	3prime_fragment	TRUE	canonical	0	0	junction_12	7.1820329449413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	144232639	144142398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
Isoform_67105_60	chr7	-	3702	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	38	0	38	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493568	144483667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
Isoform_67108_19	chr7	-	3752	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493618	144483667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
Isoform_67130_17	chr7	-	2774	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	84	135	4	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837664	144807794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
Isoform_67131_75	chr7	-	734	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTATTTTTCTCAAT	6398	False	NA	-17	True	AATAAA	-10	NA	121701069	121690059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
Isoform_67139_3	chr7	-	1210	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	2347	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACCAGGCGTGGTGGCG	NA	False	NA	NA	False	ATTAAA	-14	NA	81439213	81429582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
Isoform_67141_3	chr7	-	517	2	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGAAAAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	79048106	79046189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_79046493_79047892
Isoform_67142_3	chr7	-	705	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGAAAAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	79048207	79046189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_79046493_79047383_79047471_79047892
Isoform_67143_3	chr7	-	726	4	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGCCAAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	79048106	79046181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_79046493_79047177_79047262_79047383_79047501_79047892
Isoform_67144_3	chr7	-	3470	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	-7	638	multi-exon	FALSE	canonical	2	11	junction_1	66.4640841368572	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4661996	4633855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
Isoform_67145_8	chr7	-	1999	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	-22	105	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAAGTTGCTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	35237140	35196774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
Isoform_67146_5	chr7	-	1258	2	Intergenic	novelGene_1829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACAGTATCTGCATTAA	NA	False	NA	NA	False	AATAAA	-22	NA	81814540	81761691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_81762785_81814375
Isoform_67148_9	chr7	-	206	1	Intergenic	novelGene_1777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCATCTGACCTCAGTC	NA	False	NA	NA	False	NA	NA	NA	27379836	27379630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_27379600_27379800
Isoform_67149_3	chr7	-	3363	2	Intergenic	novelGene_1858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTCTTGGTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	118622945	118608192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_118611350_118622739
Isoform_67150_5	chr7	-	757	2	Intergenic	novelGene_1859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGCCTTCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	118622956	118610809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_118611350_118622739
Isoform_67151_5	chr7	-	493	2	Intergenic	novelGene_1849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTTTGTTTTTTCTGT	NA	False	NA	NA	False	GATAAA	-4	NA	106838192	106836997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_106837208_106837909
Isoform_67153_3	chr7	-	614	2	Intergenic	novelGene_1876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTGCCTGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	140640773	140638366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_140638918_140640710
Isoform_67155_3	chr7	-	1409	10	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	95.2727079959885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126817617	126813618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_126814069_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
Isoform_67158_70	chr7	+	2771	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	47	-5	6	5	multi-exon	FALSE	canonical	3	335	junction_1	308.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCATGCTTTCTTTCTC	277	False	NA	19	True	AATATA	-13	NA	3339105	3347870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3339156_3341727_3341816_3345237
Isoform_67159_118	chr7	+	2641	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	39	133	-2	-106	multi-exon	FALSE	canonical	3	335	junction_1	308.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTAATTTTCT	269	False	NA	15	True	NA	NA	NA	3339097	3347732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3339156_3341727_3341816_3345237
Isoform_6716_663	chr11	-	3523	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	5	19	0	-2	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96714834	96708258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
Isoform_67161_28	chr7	+	2745	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	31	-104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTTTAATTTTCTGG	302	False	NA	17	True	NA	NA	NA	3339130	3347734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3339318_3341727_3341816_3345237_3346672_3346698
Isoform_67162_21	chr7	+	2873	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAAGACTCATGCTTT	300	False	NA	12	True	AATATA	-6	NA	3339128	3347863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3339318_3341727_3341816_3345237_3346670_3346699
Isoform_67163_30	chr7	+	2782	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	-6	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTAATTTTCT	265	False	NA	15	True	NA	NA	NA	3339093	3347732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3339318_3341727_3341816_3345237_3346671_3346695
Isoform_67164_19	chr7	+	2910	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACTCATGCTTTCTTT	271	False	NA	16	True	AATATA	-10	NA	3339099	3347867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3339318_3341727_3341816_3345237_3346669_3346694
Isoform_67169_7	chr7	+	2871	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	-41	-32	-41	5	multi-exon	FALSE	canonical	3	952	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCATGCTTTCTTTCTC	2749	False	NA	19	True	AATATA	-13	NA	3341577	3347870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3341816_3345237
Isoform_6717_91	chr11	-	3564	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-34	17	-34	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714873	96708256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
Isoform_67170_7	chr7	+	2564	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	107	-106	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTAATTTTCT	2897	False	NA	15	True	NA	NA	NA	3341725	3347732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3341816_3345237_3346673_3346693
Isoform_67171_4	chr7	+	3029	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	94	4	-29	-4	multi-exon	FALSE	canonical	3	18	junction_10	8.64845927034781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352131	3379611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
Isoform_67172_3	chr7	+	3121	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	2	4	2	-4	multi-exon	TRUE	canonical	3	18	junction_10	8.64845927034781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352039	3379611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
Isoform_67173_5	chr7	+	2939	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	-91	-729	32	-3	multi-exon	FALSE	canonical	3	19	junction_9	8.11802585300146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGATGTTTTCTT	NA	False	NA	8	True	AATAAA	-19	NA	3352069	3379612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
Isoform_67174_18	chr7	+	2536	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-559	0	-559	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472151	3484183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
Isoform_67175_6	chr7	+	2647	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-669	-1	-669	1	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGTGTTGGAGCTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	3472041	3484184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
Isoform_67176_14	chr7	+	2714	5	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-602	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.79422863405995	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472108	3484183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3473509_3478953_3479029_3480334_3480473_3481159_3481295_3483217
Isoform_67177_11	chr7	+	2451	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1079	-504	-612	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472098	3484183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3473509_3478953_3479029_3483217
Isoform_67178_8	chr7	+	641	2	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-6	1899	0	510	5prime_fragment	FALSE	canonical	3	2080	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	262	False	NA	NA	False	NA	NA	NA	3620378	3621228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_3620407_3620615
Isoform_67180_702	chr7	+	343	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	7	165	0	-1	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	262	False	NA	21	True	AATAAA	-23	NA	3620378	3623161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
Isoform_67183_17	chr7	+	347	4	FSM	ENSMUSG00000035674.14	ENSMUST00000148403.2	343	4	-5	1	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	1620.57650921585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTTCGTGGGT	268	False	NA	21	True	AATAAA	-23	NA	3620384	3623161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3620417_3620615_3620691_3622428_3622507_3622999
Isoform_67185_13	chr7	+	836	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	24	-33	24	33	multi-exon	FALSE	canonical	3	674	junction_1	159.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGATGTGTTTTCTAA	2964	False	NA	NA	False	AATAAA	-18	NA	3633014	3634453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3633056_3633556_3633742_3633843
Isoform_67187_522	chr7	+	1850	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	36	1258	29	-1	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGGGTGTGAGTGATTA	2969	False	NA	13	True	ATTAAA	-21	NA	3633019	3644227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_67188_14	chr7	+	3105	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	36	3	29	-2	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATGAGTTCAATACTT	2969	False	NA	NA	False	AATAAA	-18	NA	3633019	3645482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_67195_8	chr7	+	1948	14	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	241.003081322834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2999	False	NA	10	True	ATTAAA	-18	NA	3633049	3644224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3633187_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
Isoform_67201_27	chr7	+	2924	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	215.895415536845	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGAGGCCTCTCCTAT	2710	False	NA	NA	False	AATAAA	-20	NA	3648248	3664105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_67202_118	chr7	+	2915	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-102	9	-18	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2710	False	NA	NA	False	AATAAA	-14	NA	3648248	3664099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_67203_19	chr7	+	2890	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2755	False	NA	NA	False	AATAAA	-23	NA	3648293	3664108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
Isoform_67206_8	chr7	+	1480	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	32	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2044	False	NA	2	True	AATAAA	-12	NA	3696632	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67207_14	chr7	+	1365	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	-14	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2159	False	NA	2	True	AATAAA	-12	NA	3696747	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67208_22	chr7	+	1476	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	287	16	60	4	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2072	False	NA	2	True	AATAAA	-12	NA	3696660	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67209_44	chr7	+	1394	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	369	16	-19	4	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2154	False	NA	2	True	AATAAA	-12	NA	3696742	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67211_19	chr7	+	1360	5	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	118	4	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	468.595241119668	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2357	False	NA	2	True	AATAAA	-12	NA	3696945	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67212_11	chr7	+	1366	5	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2707	False	NA	2	True	AATAAA	-12	NA	3697295	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3697414_3697596_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67213_6	chr7	+	1428	5	ISM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	786	-131	26	6	3prime_fragment	FALSE	canonical	3	59	junction_4	570.385998688607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGTCCTTACAACAAT	2959	False	NA	12	True	AATAAA	-22	NA	3697547	3704017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
Isoform_67215_167	chr7	+	1300	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	23	-4	23	4	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTATTTTGAGTCC	2956	False	NA	2	True	AATAAA	-12	NA	3697544	3704007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
Isoform_67224_139	chr7	+	880	6	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_4	6461.44068764854	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	3	True	AATAAA	-18	NA	3707036	3709896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
Isoform_67226_7855	chr7	+	706	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	45	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	7855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	3	True	AATAAA	-18	NA	3707036	3709896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
Isoform_67228_135	chr7	+	753	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1262	False	NA	3	True	AATAAA	-18	NA	3706989	3709896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
Isoform_67245_7	chr7	+	1927	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	-40	2468	-37	1	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGCTAGGTCCTTCTT	253	False	NA	4	True	AATAAA	-19	NA	4122491	4137239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_67246_23	chr7	+	1881	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	8	2466	8	3	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTAGGTCCTTCTTAT	301	False	NA	6	True	AATAAA	-21	NA	4122539	4137241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_67247_3	chr7	+	2959	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	20	1376	-3	-1	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATATGCTTACATGT	313	False	NA	NA	False	NA	NA	NA	4122551	4138331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
Isoform_67248_12	chr7	+	2503	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	-23	32	-23	-15	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAAATAAACAAACA	267	False	NA	NA	False	NA	NA	NA	4122505	4138314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
Isoform_67249_6	chr7	+	2467	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	42	3	-13	-3	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATGTGAGAGGATAAAA	332	False	NA	NA	False	NA	NA	NA	4122570	4138343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
Isoform_67250_8	chr7	+	3620	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_1	83.8505548911607	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	81	False	NA	20	True	ATTAAA	-20	NA	4140036	4151176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_67251_3	chr7	+	3684	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	110.212560961762	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	92	False	NA	15	True	ATTAAA	-15	NA	4140047	4151171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_67252_20	chr7	+	3644	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	81	False	NA	15	True	ATTAAA	-15	NA	4140036	4151171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
Isoform_67253_33	chr7	+	2148	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	41	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67254_13	chr7	+	2201	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	-14	2	-14	-2	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	569	False	NA	14	True	ATTAAA	-15	NA	4743099	4750511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67255_8	chr7	+	2322	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-29	-1	0	1	intron_retention	FALSE	canonical	3	456	junction_1	89.2823999384846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	624	False	NA	17	True	ATTAAA	-18	NA	4743154	4750514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
Isoform_67256_513	chr7	+	2204	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-29	2	0	-2	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	624	False	NA	14	True	ATTAAA	-15	NA	4743154	4750511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67257_19	chr7	+	2274	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-99	2	-29	-2	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	554	False	NA	14	True	ATTAAA	-15	NA	4743084	4750511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67258_17	chr7	+	2299	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	226.026789064925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
Isoform_67261_61	chr7	+	2535	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	624	False	NA	14	True	ATTAAA	-15	NA	4743154	4750511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67266_21	chr7	+	2785	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	-11	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
Isoform_67269_1917	chr7	+	509	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	90	507	-26	-3	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGTGCTCATTGA	2783	False	NA	14	True	AATAAA	-29	NA	4795962	4797558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
Isoform_67272_528	chr7	+	783	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	11	-22	11	-14	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCTCCAAAATGTTTT	2820	False	NA	3	True	AATAAA	-18	NA	4795999	4797547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
Isoform_67280_14	chr7	+	3542	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	-18	-1	-18	1	multi-exon	FALSE	canonical	3	14	junction_2	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTGTTTTCATGG	2953	False	NA	9	True	AATAAA	-15	NA	4918197	4925002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_4918405_4920408_4920516_4921774
Isoform_67281_29	chr7	+	1117	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	25	0	25	0	multi-exon	FALSE	canonical	3	22	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACTGTGTGTTCAGTC	2965	False	NA	5	True	AATAAA	-15	NA	5018493	5021486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5018560_5020435
Isoform_67282_3	chr7	+	3944	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	-171	461	23	-109	5prime_fragment	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCTGGGGTCTGTCCTTG	2777	False	NA	4	True	AATAAA	-14	NA	5023397	5035676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_5023655_5031989
Isoform_67283_43	chr7	+	1097	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	32	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2918	False	NA	4	True	AATAAA	-15	NA	5054535	5056722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5054714_5055803
Isoform_67284_1428	chr7	+	2116	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	62	5	-40	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	134	False	NA	28	True	ATTAAA	-18	NA	5065203	5082932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
Isoform_67286_50	chr7	+	2641	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	-454	-4	-454	4	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATCTGTGTCCAGTGT	2426	False	NA	37	True	ATTAAA	-27	NA	5064687	5082941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
Isoform_67289_334	chr7	+	2106	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	17	False	NA	28	True	ATTAAA	-18	NA	5065225	5082932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
Isoform_67291_20	chr7	+	2044	11	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	28	junction_2	528.922527408315	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	22	False	NA	28	True	ATTAAA	-18	NA	5065230	5082932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
Isoform_67295_104	chr7	+	2576	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	31.3495356971958	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1299	False	NA	20	True	AATAAA	-14	NA	5083224	5101176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_67297_126	chr7	+	2574	12	FSM	ENSMUSG00000035203.17	ENSMUST00000098845.10	2565	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	82	junction_1	31.9772646507711	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_673_7	chr10	-	2823	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	36	-7	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTTCATTATCTCCA	NA	False	NA	-13	True	AATAAA	-14	NA	13350120	13089145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_6730_86	chr11	-	4578	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	9	9	8	8	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTGCACTTTCTCCCC	NA	False	NA	-15	True	AATAAA	-24	NA	96720319	96708248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
Isoform_67301_41	chr7	+	2510	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.1135345280822	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_67302_38	chr7	+	2507	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.5085248605051	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_67304_19	chr7	+	2473	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.976812071818	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_67305_16	chr7	+	2470	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	44.445584707595	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_67306_6	chr7	+	2394	11	NIC	ENSMUSG00000035203.17	novel	2334	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.5119339524815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1310	False	NA	20	True	AATAAA	-14	NA	5083235	5101176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_67307_18	chr7	+	2402	11	FSM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	-67	-1	-9	1	multi-exon	TRUE	canonical	3	8	junction_1	46.9447547655753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1299	False	NA	20	True	AATAAA	-14	NA	5083224	5101176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_67308_18	chr7	+	2713	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.4569090294577	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	1322	False	NA	19	True	AATAAA	-13	NA	5083247	5101175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
Isoform_67309_9	chr7	+	2736	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.8262979824561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCCCTTAAATTCT	1299	False	NA	22	True	AATAAA	-16	NA	5083224	5101178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_6731_733	chr11	-	4601	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	36	17	23	0	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720758	96708256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
Isoform_67311_5	chr7	+	2647	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	53.7554917432813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTCCCTTAAATTCTC	1322	False	NA	23	True	AATAAA	-17	NA	5083247	5101179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_5083638_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
Isoform_67313_13	chr7	+	3613	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	11	-9	11	9	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAATTTCAAATGTTAA	2988	False	NA	30	True	AATAAA	-26	NA	6048170	6108158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
Isoform_67314_9	chr7	+	2516	6	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	-24	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	104.614721717357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTTCTCGTTCTTAA	2994	False	NA	NA	False	NA	NA	NA	6175538	6194349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404_6194188_6194221
Isoform_67315_38	chr7	+	1617	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	27	4	-24	-4	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2994	False	NA	11	True	AATAAA	-20	NA	6175538	6193416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
Isoform_67316_7	chr7	+	2427	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	41	-1	-21	1	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTTCTCGTTCTTAA	2997	False	NA	NA	False	NA	NA	NA	6175541	6194349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
Isoform_67317_32	chr7	+	1497	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	38	932	-24	-4	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2994	False	NA	11	True	AATAAA	-20	NA	6175538	6193416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
Isoform_6732_50	chr11	-	4646	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	0	8	0	-8	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96720794	96708247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
Isoform_67320_6	chr7	+	1962	6	FSM	ENSMUSG00000058028.15	ENSMUST00000072662.12	1980	6	10	8	-7	-8	multi-exon	FALSE	canonical	2	4	junction_1	2.49799919935936	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATCTATTCATTGATT	3090	False	NA	NA	False	ATTAAA	-14	NA	6225286	6242414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6225336_6227584_6227759_6233070_6233538_6234335_6234537_6236813_6236968_6241497
Isoform_67321_7	chr7	+	955	9	NIC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-236	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.4952825989835	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	2976	False	NA	8	True	AATAAA	-23	NA	6263298	6284860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
Isoform_67322_3	chr7	+	870	8	NIC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-211	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.8353097362522	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGATTCAGTGCGT	3001	False	NA	5	True	AATAAA	-20	NA	6263323	6284857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_6263544_6266905_6266933_6269828_6269847_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
Isoform_67323_12	chr7	+	3446	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	15	211	1	-10	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACAAAGAGGTTCTTT	2987	False	NA	NA	False	AATAAA	-27	NA	6289592	6310671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
Isoform_67327_4	chr7	+	2212	6	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	3	-900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.03492377064027	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAAAAAGCCATG	3015	False	NA	NA	False	AAGAAA	-26	NA	6346760	6358055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6346862_6349091_6349257_6349343_6349432_6351435_6351563_6352716_6352813_6356420
Isoform_67328_3	chr7	+	2107	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	35	1741	5	60	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGACTGTATTAAGTTT	2989	False	NA	NA	False	CATAAA	-14	NA	6366313	6382967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
Isoform_67329_6	chr7	+	2743	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	-2	1706	-2	1080	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGAGATGTGTTTAGC	2957	False	NA	NA	False	TATAAA	-19	NA	6386291	6398208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
Isoform_67330_5	chr7	+	2450	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	291	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATGGCACTGTGATAT	2990	False	NA	21	True	AATAAA	-30	NA	6980080	6993558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
Isoform_67331_4	chr7	+	2947	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-160	-27	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAAAATTTTTTCA	2994	False	NA	3	True	AATAAA	-14	NA	6980084	6994059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
Isoform_67332_4	chr7	+	3014	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	-18	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	8.7086164228309	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTTTCAGATTAAAAA	2990	False	NA	12	True	AATAAA	-23	NA	6980080	6994068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988152_6989101_6989202_6991881
Isoform_67333_7	chr7	+	1060	7	FSM	ENSMUSG00000070837.7	ENSMUST00000086248.8	1154	7	93	1	-27	-1	multi-exon	FALSE	canonical	2	17	junction_1	169.856802434678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2887	False	NA	19	True	ATTAAA	-20	NA	6998474	7006089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6998548_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_67334_113	chr7	+	1203	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	197	1	-6	-1	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2908	False	NA	19	True	ATTAAA	-20	NA	6998495	7006089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_67336_7	chr7	+	1257	7	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	167.377484215238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2908	False	NA	19	True	ATTAAA	-20	NA	6998495	7006089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_6998712_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_67337_18	chr7	+	1324	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-6	2	-6	1	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2908	False	NA	18	True	ATTAAA	-19	NA	6998495	7006088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_67338_5	chr7	+	1097	6	ISM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	644	12	478	-9	3prime_fragment	FALSE	canonical	2	56	junction_5	137.89706305792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCATCAATATTCTTG	3558	False	NA	8	True	ATTAAA	-9	NA	6999145	7006078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
Isoform_67339_23	chr7	+	2694	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	24	7	0	-7	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTTTTAATCAAGA	2993	False	NA	NA	False	AATAAA	-22	NA	7174352	7186554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
Isoform_67340_3	chr7	+	1877	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	-23	422	-23	-422	multi-exon	FALSE	canonical	3	7	junction_1	11.2644968324772	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	10739648	10744052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
Isoform_67341_22	chr7	+	4014	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	55	679	-15	3	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGAAACCTGGTTACCT	NA	False	NA	15	True	AATAAA	-19	NA	12212274	12229483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
Isoform_67342_4	chr7	+	1566	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	-3	3185	-3	-2503	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGGCAGTGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	12212216	12226977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
Isoform_67345_8	chr7	+	3438	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-11	6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	121.410203442709	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTATAGCGTGTAAGTCA	NA	False	NA	33	True	NA	NA	NA	12568952	12584510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_12569092_12569373_12569455_12569881_12569988_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_67346_8	chr7	+	2111	3	FSM	ENSMUSG00000058638.15	ENSMUST00000148041.2	603	3	-37	-1471	-37	1471	multi-exon	FALSE	canonical	3	285	junction_1	26.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12568926	12572084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12569092_12569373_12569455_12570219
Isoform_67347_201	chr7	+	3353	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	239	-1	-37	1	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568926	12584505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_67348_9	chr7	+	3561	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	32	-2	-23	2	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGACTATAGCGTGTAA	NA	False	NA	29	True	NA	NA	NA	12568719	12584506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_67349_9	chr7	+	3645	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	-53	-1	-53	1	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568634	12584505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_67356_13	chr7	+	2224	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	18	1592	18	-11	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACATATGACCCTTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	12615121	12625757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
Isoform_67358_10	chr7	+	2110	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	44	841	13	-1	multi-exon	FALSE	canonical	3	21	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTCTGTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	12631806	12642169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12631908_12640160
Isoform_67359_3	chr7	+	2973	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	6	16	1	-16	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGACTGCATACCAATT	NA	False	NA	14	True	AATAAA	-25	NA	12631768	12642994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12631908_12640160
Isoform_67362_9529	chr7	+	733	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	28	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	9529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
Isoform_67366_186	chr7	+	766	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	29	-1	1	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656245	12660613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
Isoform_67379_4	chr7	+	2612	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	4	1699	-3	1411	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCGTGACACATGACTT	NA	False	NA	NA	False	TATAAA	-16	NA	12699768	12706050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
Isoform_67381_5	chr7	+	3583	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	1	-990	1	46	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCAACACTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	12711775	12718313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
Isoform_67387_10	chr7	+	3386	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	0	39	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGAGTTTTCAACAC	NA	False	NA	NA	False	NA	NA	NA	12711774	12718306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
Isoform_67390_11551	chr7	+	2988	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	256	1	256	-1	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	11551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758334	12764961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_67391_892	chr7	+	3247	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	-3	1	-3	-1	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758075	12764961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_67393_2253	chr7	+	3023	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	225	-3	225	3	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCAGCTGTCTGGGG	NA	False	NA	61	True	AATAAA	-22	NA	12758303	12764965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_67394_1131	chr7	+	3214	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	30	1	30	-1	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758108	12764961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
Isoform_674_3	chr10	-	2979	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-114	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATTATCTCCAAAGTCA	NA	False	NA	-7	True	AATAAA	-20	NA	13350270	13089139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_6743_95	chr11	-	3947	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-30	0	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714869	96708256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
Isoform_6744_44	chr11	-	3575	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-16	-8	intron_retention	FALSE	canonical	2	47	junction_3	618.964906562202	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96713567	96708247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713462
Isoform_6746_27	chr11	-	3354	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	71	junction_1	153.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714822	96708256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96711343_96712929_96713146_96714770
Isoform_67476_12	chr7	+	3304	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	-130	0	-130	0	multi-exon	TRUE	canonical	3	470	junction_1	193.081793225492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	977	False	NA	30	True	AATAAA	-18	NA	13011108	13045350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_67481_13	chr7	+	3061	28	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	347.18983947761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2657	False	NA	31	True	AATAAA	-19	NA	13012788	13045351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_67483_120	chr7	+	3092	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2620	False	NA	31	True	AATAAA	-19	NA	13012751	13045351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_67484_266	chr7	+	3044	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	46	1	37	-1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2666	False	NA	29	True	AATAAA	-17	NA	13012797	13045349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_67486_16	chr7	+	3395	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	-303	-1	-303	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2317	False	NA	31	True	AATAAA	-19	NA	13012448	13045351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
Isoform_67500_4	chr7	+	2781	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	3	-694	3	694	multi-exon	FALSE	canonical	3	257	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	15630098	15634917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15630183_15631328_15631478_15632369
Isoform_67501_61	chr7	+	2131	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-43	2	4	-2	multi-exon	FALSE	canonical	3	257	junction_2	3	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGATCTGTGCCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	15630052	15634221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15630183_15631328_15631478_15632369
Isoform_67505_42	chr7	+	928	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	1	5	1	-5	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGACTGCTTTAAAAG	NA	False	NA	14	True	AATAAA	-19	NA	15630049	15637940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
Isoform_67506_199	chr7	+	566	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	16	-11	16	11	multi-exon	FALSE	canonical	3	864	junction_1	106.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTGGGTCTTATT	NA	False	NA	0	True	AATAAA	-35	NA	15635586	15637956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15635663_15636774_15636933_15637624
Isoform_67507_93	chr7	+	614	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-46	3	-46	-3	multi-exon	FALSE	canonical	3	864	junction_1	106.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACTGCTTTAAAAGAA	NA	False	NA	-14	True	AATAAA	-21	NA	15635524	15637942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15635663_15636774_15636933_15637624
Isoform_67509_231	chr7	+	2373	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	145	-1	-5	1	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACATCTCATTCATT	NA	False	NA	3	True	AATAAA	-18	NA	15832527	15851901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_67510_34	chr7	+	2396	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	122	-1	-28	1	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCACATCTCATTCATT	NA	False	NA	3	True	AATAAA	-18	NA	15832504	15851901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_67512_929	chr7	+	1525	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	145	847	-5	389	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832527	15851053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_67513_173	chr7	+	1548	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	122	847	-28	389	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832504	15851053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
Isoform_67526_132	chr7	+	1632	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-3	1	-3	-1	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTTGTCTGGCAAGC	NA	False	NA	31	True	NA	NA	NA	15853816	15861440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
Isoform_67528_3	chr7	+	4234	10	FSM	ENSMUSG00000030376.9	ENSMUST00000211649.2	5261	10	477	550	-45	0	multi-exon	FALSE	canonical	0	0	junction_1	0.314269680527354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCCGTGGGAAGTTGG	NA	False	NA	22	True	CATAAA	-23	NA	15864227	15894438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15864347_15867753_15868445_15874428_15875094_15878855_15879279_15884265_15884370_15884498_15884517_15886743_15886869_15887119_15887220_15891071_15891351_15892728
Isoform_67529_3	chr7	+	1924	12	FSM	ENSMUSG00000041420.19	ENSMUST00000175946.8	1925	12	1	0	1	0	multi-exon	FALSE	canonical	3	10	junction_3	3.73723723474445	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7653	False	NA	NA	False	AATAAA	-14	NA	15909313	15920426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
Isoform_67530_147	chr7	+	1846	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-33	1	-33	-1	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTTTTGTTAGCTTT	NA	False	NA	25	True	AATAAA	-18	NA	16043507	16052129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
Isoform_67531_8	chr7	+	1710	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-59	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTTTTGTTAGCTTT	NA	False	NA	25	True	AATAAA	-18	NA	16044320	16052129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
Isoform_67533_3	chr7	+	4833	7	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	21221	5	7583	-4	3prime_fragment	FALSE	canonical	0	0	junction_3	33.9803864996658	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGAGTCTAGTC	NA	False	NA	13	True	ATTAAA	-17	NA	16156352	16171616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
Isoform_67534_3	chr7	+	4847	6	ISM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	24082	4	10444	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	39.8948618245508	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGAGTCTAGTC	NA	False	NA	13	True	ATTAAA	-17	NA	16159213	16171616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
Isoform_67535_22	chr7	+	707	3	FSM	ENSMUSG00000019158.10	ENSMUST00000209536.2	699	3	-7	-1	-7	1	multi-exon	FALSE	canonical	3	42	junction_1	359.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGAGTGATAGCTCC	NA	False	NA	21	True	ATTAAA	-22	NA	16186880	16189420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16187096_16187981_16188139_16189085
Isoform_67538_564	chr7	+	646	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	174	-5	-10	1	multi-exon	FALSE	canonical	3	728	junction_1	16.5	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGAGTGATAGCTCC	NA	False	NA	21	True	ATTAAA	-22	NA	16186877	16189420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16187096_16188045_16188139_16189085
Isoform_6754_61	chr11	-	1980	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	109	348	5	42	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTGAAGCTGTGCAC	NA	False	NA	1	True	NA	NA	NA	96807213	96798599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
Isoform_67540_37	chr7	+	833	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	2	1	2	-1	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTGAGCCCTCA	NA	False	NA	18	True	AATAAA	-18	NA	16472336	16483218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
Isoform_67541_314	chr7	+	802	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	34	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	19	True	AATAAA	-19	NA	16472368	16483219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
Isoform_67549_9005	chr7	+	2713	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	29	22	1	-22	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	9005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTAGAGTCTGAGTAATA	NA	False	NA	51	True	AATAAA	-25	NA	16515293	16532177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
Isoform_6755_76	chr11	-	1938	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	109	390	5	0	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807213	96798641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
Isoform_6757_135	chr11	-	1923	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	-14	341	-14	49	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGCACATGTTTT	NA	False	NA	8	True	NA	NA	NA	96807336	96798592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_67579_177	chr7	+	3101	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	431	3	3	1	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGTTTTCCAGGCCAT	NA	False	NA	13	True	AATAAA	-13	NA	16550244	16574853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_6758_255	chr11	-	1807	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	83	360	1	30	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCCTGCTTGAAGTT	NA	False	NA	-11	True	AATAAA	-45	NA	96807239	96798611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_67581_430	chr7	+	3064	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	17	1	17	-1	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGTTTTCCAGGCC	NA	False	NA	11	True	AATAAA	-11	NA	16550258	16574851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_67582_66	chr7	+	3089	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	-6	-1	-6	1	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGTTTTCCAGGCCAT	NA	False	NA	13	True	AATAAA	-13	NA	16550235	16574853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
Isoform_67584_115	chr7	+	686	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	10	-2	-3	2	multi-exon	FALSE	canonical	3	241	junction_2	21	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCCTCCGGTGAATCTC	NA	False	NA	8	True	AATAAA	-17	NA	18618614	18624368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18618899_18623202_18623325_18624088
Isoform_67585_6	chr7	+	2263	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	-89	-1	-89	1	multi-exon	FALSE	canonical	2	7	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGGCTCTGAGACAGG	6875	False	NA	NA	False	AATAAA	-19	NA	18725080	18735690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18725280_18725756_18726546_18734415
Isoform_67586_26	chr7	+	2112	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	60	1	-14	-1	multi-exon	FALSE	canonical	2	7	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGAGGCTCTGAGACA	7024	False	NA	NA	False	AATAAA	-17	NA	18725229	18735688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18725280_18725756_18726546_18734415
Isoform_67588_296	chr7	+	4068	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	46	2	0	-2	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGGATGTGCCTGT	NA	False	NA	13	True	AATAAA	-27	NA	18758347	18788540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
Isoform_67589_38	chr7	+	4146	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	-32	2	-32	-2	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGGATGTGCCTGT	NA	False	NA	13	True	AATAAA	-27	NA	18758269	18788540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
Isoform_6759_10	chr11	-	2265	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	-17	2	-17	-2	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTCACCTTTACTGG	NA	False	NA	-15	True	GATAAA	-14	NA	96807339	96798253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_67594_3	chr7	+	2797	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-2	212	-2	-212	multi-exon	FALSE	canonical	2	8	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGACAACAGAGCTATTG	NA	False	NA	-2	True	ATTAAA	-9	NA	18828516	18832262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18829344_18830156_18830945_18831080
Isoform_67595_131	chr7	+	2939	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	17	1917	17	443	multi-exon	FALSE	canonical	3	58	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCTGGCGTGTGTG	9354	False	NA	27	True	TATAAA	-20	NA	18853800	18872180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18853862_18869302
Isoform_67597_4	chr7	+	4870	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	11	-8	11	8	multi-exon	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTATAAAAAAAAAAAAAAAA	9348	False	NA	NA	False	NA	NA	NA	18853794	18874105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18853862_18869302
Isoform_67599_1813	chr7	+	508	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	97	815	-40	-815	multi-exon	FALSE	canonical	3	3249	junction_1	86	1813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTCCAGTGGTCTT	NA	False	NA	2	True	AATAAA	-20	NA	18883743	18886652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18883820_18885142_18885323_18886400
Isoform_676_6	chr10	-	2681	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	6	-179	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGCTTGCTCGCACTGT	NA	False	NA	NA	False	ATTAAA	-29	NA	13350150	13089317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
Isoform_67603_25	chr7	+	2523	21	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	2929	-222	-1820	0	3prime_fragment	FALSE	canonical	3	14	junction_1	46.9870992933167	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18913274	18940404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67605_196	chr7	+	2251	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	2	2	2	1	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915096	18940405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67606_26	chr7	+	2287	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	33.4490583749803	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915122	18940405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_18915211_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67607_49	chr7	+	2247	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915232	18940405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67609_24	chr7	+	2349	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915130	18940405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67610_13	chr7	+	2356	19	Fusion	ENSMUSG00000040811.16_ENSMUSG00000065543.3	novel	593	5	NA	NA	62	0	multi-exon	FALSE	canonical	3	11	junction_1	34.4726139291918	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915318	18940407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67611_6	chr7	+	2415	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	34.4726139291918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915257	18940405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
Isoform_67616_5	chr7	+	2031	2	FSM	ENSMUSG00000044317.8	ENSMUST00000060225.6	2882	2	0	851	0	-851	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAAAAAAATGAGGTT	NA	False	NA	NA	False	NA	NA	NA	18946462	18957248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18946560_18955314
Isoform_67617_13	chr7	+	2259	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	49	1058	0	-1058	multi-exon	FALSE	canonical	3	147	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAGTAA	3282	False	NA	NA	False	NA	NA	NA	18962307	18980735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18962510_18978678
Isoform_6762_16	chr11	-	2179	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	83	-12	1	12	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGCCTGTCCACTT	NA	False	NA	-1	True	GATAAA	-28	NA	96807239	96798239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
Isoform_67620_4	chr7	+	2326	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	-18	1058	-18	-1058	multi-exon	FALSE	canonical	3	147	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAGTAA	3215	False	NA	NA	False	NA	NA	NA	18962240	18980735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18962510_18978678
Isoform_67622_3	chr7	+	1368	2	FSM	ENSMUSG00000052214.10	ENSMUST00000161711.2	1390	2	21	1	21	-1	multi-exon	FALSE	canonical	2	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGTGTCTCAAACCAT	3303	False	NA	NA	False	ATTAAA	-13	NA	18962328	18990467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18962510_18989280
Isoform_67623_88	chr7	+	1954	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	33	3	22	-3	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCATTCTGTGTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	19016581	19030082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_67624_8	chr7	+	2035	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	-39	-6	-39	6	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTTAAAGTCCCTC	NA	False	NA	18	True	AATAAA	-26	NA	19016509	19030091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_67625_8	chr7	+	2272	9	NIC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	26	0	intron_retention	FALSE	canonical	3	51	junction_4	11.6397755562554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	NA	False	NA	12	True	AATAAA	-20	NA	19016585	19030085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_67626_4	chr7	+	1059	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_1	28.3279406632784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	597	False	NA	12	True	AATAAA	-20	NA	19025010	19030085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
Isoform_67627_218	chr7	+	1062	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	313	0	-10	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1024	False	NA	15	True	AATAAA	-20	NA	19079015	19090449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
Isoform_67631_111	chr7	+	3566	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	11	1	3	1	multi-exon	TRUE	canonical	3	88	junction_1	20.1272809394744	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGTTTGCTTCTGATA	NA	False	NA	12	True	AATAAA	-20	NA	19115945	19129618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
Isoform_67633_5	chr7	+	3477	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-3	-2	intron_retention	TRUE	canonical	2	2	junction_1	34.8788639062727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115931	19129615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
Isoform_67635_4	chr7	+	2734	11	NIC	ENSMUSG00000030400.18	novel	2799	16	NA	NA	-310	-1	intron_retention	FALSE	canonical	3	118	junction_5	12.8456218222397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGGGTTTGCTTCTGA	1934	False	NA	10	True	AATAAA	-18	NA	19121817	19129616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
Isoform_67636_258	chr7	+	760	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	19	6	1	1	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	526	False	NA	15	True	AGTAAA	-16	NA	19242655	19250064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
Isoform_67638_6	chr7	+	743	6	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	193.692126840509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	525	False	NA	15	True	AGTAAA	-16	NA	19242654	19250064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248949_19249016_19249128_19249223_19249770
Isoform_67639_4	chr7	+	1233	5	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	436	junction_1	68.656299783778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	519	False	NA	14	True	AGTAAA	-15	NA	19242648	19250063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_19242758_19248125_19248194_19248346_19249016_19249128_19249223_19249770
Isoform_67640_57	chr7	+	692	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	21	6	1	1	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACCTGTGCAGTGCTT	526	False	NA	15	True	AGTAAA	-16	NA	19242655	19250064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
Isoform_67644_25	chr7	+	1558	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	-31	3	-31	-3	multi-exon	FALSE	canonical	3	235	junction_1	5.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTGGACTTTCTTGG	696	False	NA	23	True	AATAAA	-18	NA	19311180	19314578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19311554_19311741_19311886_19313537
Isoform_67645_256	chr7	+	1486	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	36	8	36	-8	multi-exon	FALSE	canonical	3	235	junction_1	5.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTATGCCTGGACTTT	763	False	NA	18	True	AATAAA	-13	NA	19311247	19314573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_19311554_19311741_19311886_19313537
Isoform_67646_4	chr7	+	3986	6	FSM	ENSMUSG00000057101.9	ENSMUST00000206184.2	827	6	-19	-3140	4	0	multi-exon	FALSE	canonical	3	9	junction_3	37.880865882395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781352	23807123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23781664_23784850_23784932_23785912_23786017_23797245_23797321_23800872_23800994_23803829
Isoform_67648_19	chr7	+	3882	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	5	14	5	1	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACAGATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	23781353	23807124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
Isoform_67649_15	chr7	+	3909	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	-22	14	-22	1	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACAGATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	23781326	23807124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
Isoform_67650_3	chr7	+	3211	4	FSM	ENSMUSG00000052675.12	ENSMUST00000215113.2	2628	4	-174	-409	-174	152	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCCATGCTGCTCCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	23817619	23827070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23817809_23821658_23821786_23823343_23823428_23824259
Isoform_67651_28	chr7	+	3423	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	-47	-3	-1	3	multi-exon	TRUE	canonical	3	32	junction_3	6.18241233033047	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTCATCCTTTCCC	NA	False	NA	9	True	AATAAA	-17	NA	23833619	23842669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
Isoform_67652_4	chr7	+	2327	4	FSM	ENSMUSG00000068962.8	ENSMUST00000205309.2	1037	4	-17	-1273	-17	89	multi-exon	TRUE	canonical	2	5	junction_1	13.589211407093	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGATTCGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	23874467	23881832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23874575_23875533_23875592_23877174_23877302_23879797
Isoform_67653_10	chr7	+	2553	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	-21	976	-21	-9	multi-exon	TRUE	canonical	3	7	junction_2	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAAAGGATTCTGATT	NA	False	NA	NA	False	NA	NA	NA	23969823	23976243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
Isoform_67654_13	chr7	+	3167	3	FSM	ENSMUSG00000002210.12	ENSMUST00000139481.2	649	3	-104	-2414	1	-8	multi-exon	FALSE	canonical	3	143	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24099044	24107690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24099317_24102816_24102973_24104951
Isoform_67655_5	chr7	+	3074	4	ISM	ENSMUSG00000002210.12	ENSMUST00000146381.8	1620	6	8	8	8	-8	intron_retention	FALSE	canonical	3	128	junction_3	9.89949493661167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24099051	24107690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112
Isoform_67657_129	chr7	+	2230	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	11	1	11	-1	multi-exon	TRUE	canonical	3	128	junction_3	14.7828462881374	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099054	24122202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_67659_19	chr7	+	2221	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	34.9034170348701	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099054	24122202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_67661_3	chr7	+	2317	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	130	junction_4	14.0227988964004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099054	24122203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_24099317_24102816_24102973_24104951_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_67662_4	chr7	+	2038	14	NIC	ENSMUSG00000002210.12	novel	784	6	NA	NA	73	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	39.9862402369118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTGGGGTTTGTTCT	NA	False	NA	14	True	AATAAA	-14	NA	24099418	24122198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_24099493_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
Isoform_67663_7	chr7	+	1505	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	2	-1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161910	24175393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
Isoform_67664_4	chr7	+	1554	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	-47	-1	-47	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161861	24175393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
Isoform_67666_219	chr7	+	2137	9	FSM	ENSMUSG00000054793.9	ENSMUST00000068023.8	2161	9	22	2	22	-2	multi-exon	FALSE	canonical	3	44	junction_8	7.9912061042123	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGGGTGGCTGTGTGT	6423	False	NA	NA	False	ATTAAA	-15	NA	24181469	24203962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24199484_24199900_24200066_24200156_24200248_24200989_24201163_24202090_24202220_24202936
Isoform_67670_6	chr7	+	1165	3	FSM	ENSMUSG00000064264.15	ENSMUST00000176880.2	1045	3	128	-248	4	-13	multi-exon	FALSE	canonical	3	38	junction_1	119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206558	24215092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24206862_24209947_24210179_24214461
Isoform_67671_6	chr7	+	1167	3	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-17	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	184.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTGGCTCCGCATAT	NA	False	NA	17	True	AATAAA	-11	NA	24206513	24215088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_24206862_24209947_24210179_24214500
Isoform_67672_118	chr7	+	1187	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-41	13	-10	-13	multi-exon	FALSE	canonical	3	276	junction_2	107	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24206862_24209970_24210179_24214461
Isoform_67674_17	chr7	+	1259	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-110	10	14	-10	multi-exon	FALSE	canonical	3	276	junction_2	107	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCGCATATGTTCGAG	NA	False	NA	24	True	AATAAA	-18	NA	24206444	24215095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24206862_24209970_24210179_24214461
Isoform_67678_20	chr7	+	1192	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	-28	18	-28	-16	multi-exon	FALSE	canonical	3	407	junction_2	41.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206466	24215089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24206862_24209970_24210179_24214500
Isoform_67679_175	chr7	+	1148	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	19	15	-10	-13	multi-exon	FALSE	canonical	3	407	junction_2	41.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24206862_24209970_24210179_24214500
Isoform_67681_17	chr7	+	1407	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTTCGAGCTGCGTGA	NA	False	NA	32	True	AATAAA	-26	NA	24206513	24215103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
Isoform_67683_37	chr7	+	1356	4	NNC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-14	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	150.608395811418	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	20	True	AATAAA	-14	NA	24206513	24215091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214500
Isoform_67685_4	chr7	+	2097	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	-36	4022	-36	-4022	multi-exon	FALSE	canonical	2	4	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGAAGGAGACTGACAT	NA	False	NA	NA	False	NA	NA	NA	24230077	24234003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24230330_24230808_24231341_24232690
Isoform_67686_143	chr7	+	2097	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	52	6	1	-2	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAACGGTTTCTCTCT	NA	False	NA	1	True	AATAAA	-13	NA	24246626	24272857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
Isoform_67688_61	chr7	+	963	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6339	1	6339	-1	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTTCTGCTTGCTTT	NA	False	NA	8	True	AATAAA	-23	NA	24293306	24308349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
Isoform_67690_4	chr7	+	1071	5	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	4110	3	4110	-3	3prime_fragment	FALSE	canonical	3	13	junction_4	5.31507290636732	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATCGAGAGTTGATT	NA	False	NA	1	True	NA	NA	NA	24573591	24577073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
Isoform_67692_143	chr7	+	592	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	0	1	0	1	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584057	24589230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
Isoform_67694_1472	chr7	+	551	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	222	1	-40	1	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584017	24589230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_67695_5238	chr7	+	511	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	262	1	0	1	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	5238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584057	24589230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_67698_90	chr7	+	698	6	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	10491.1802119685	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584057	24589230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_24584280_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_677_31	chr10	-	2015	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	92	22	73	4	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCTTTGTTTAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	13428791	13399881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_67701_118	chr7	+	681	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	-49	1	14	1	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTCTGGATCTGGTT	NA	False	NA	25	True	AATAAA	-15	NA	24584089	24589230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
Isoform_67713_42	chr7	+	3216	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-3	-1	-3	1	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8551	False	NA	32	True	AATATA	-14	NA	24602458	24626015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_67714_6	chr7	+	3328	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-121	5	4	-5	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAAGATCTGTGTGTG	8433	False	NA	26	True	AATATA	-8	NA	24602340	24626009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_67715_9	chr7	+	3215	29	FSM	ENSMUSG00000040940.19	ENSMUST00000206508.2	3195	29	-26	6	-7	-1	multi-exon	FALSE	canonical	3	24	junction_11	75.6323006258515	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTGTGTGTGTGAG	8547	False	NA	30	True	AATATA	-12	NA	24602454	24626013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_67716_333	chr7	+	3274	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-62	2	-11	1	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9862	False	NA	32	True	AATATA	-14	NA	24603769	24626015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_67719_47	chr7	+	3271	29	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	60.0176844686597	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9862	False	NA	32	True	AATATA	-14	NA	24603769	24626015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
Isoform_67721_60	chr7	+	3069	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	60	1011	-19	1	multi-exon	FALSE	canonical	3	224	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	5015	False	NA	23	True	AATAAA	-19	NA	24776689	24781906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24776812_24778959
Isoform_67722_56	chr7	+	3099	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	30	1011	30	1	multi-exon	FALSE	canonical	3	224	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4985	False	NA	23	True	AATAAA	-19	NA	24776659	24781906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24776812_24778959
Isoform_67724_12	chr7	+	3165	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	-19	-1	-19	1	multi-exon	FALSE	canonical	3	92	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	5015	False	NA	23	True	AATAAA	-19	NA	24776689	24781906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_24776908_24778959
Isoform_67725_4	chr7	+	2016	7	ISM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	9113	3	84	0	3prime_fragment	FALSE	canonical	3	51	junction_3	29.5658398982489	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	194	False	NA	9	True	ATTAAA	-11	NA	24990716	24993567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_67726_3	chr7	+	2217	7	ISM	ENSMUSG00000005442.14	ENSMUST00000167379.2	4732	15	5268	-3	-80	0	3prime_fragment	FALSE	canonical	3	45	junction_3	31.029108197877	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	-7	True	NA	12	True	ATTAAA	-14	NA	24990515	24993570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_67727_4	chr7	+	1439	5	ISM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	10094	0	338	0	3prime_fragment	FALSE	canonical	3	51	junction_1	32.5297940356222	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	1175	False	NA	12	True	ATTAAA	-14	NA	24991697	24993570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
Isoform_67728_40	chr7	+	1446	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	19	0	9	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1758	False	NA	39	True	NA	NA	NA	25318857	25324976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
Isoform_67730_14	chr7	+	1061	6	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	507.074905709206	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358626	25367457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_25358809_25362561_25362676_25363672_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_67732_1294	chr7	+	982	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	38	0	-10	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358626	25367457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_67733_17	chr7	+	1067	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	-47	0	-47	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358541	25367457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_67734_19	chr7	+	2056	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1215	junction_4	52.4517635547176	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCGGTGTCTGGAGAGT	NA	False	NA	29	True	ATTAAA	-41	NA	25358626	25367455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_25358809_25362561_25363874_25364845_25364987_25365677_25365768_25367124
Isoform_67738_86	chr7	+	982	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	16	-3	16	3	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCCTCCTTGTATCCGC	NA	False	NA	11	True	AATAAA	-22	NA	25380220	25385986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
Isoform_67739_3	chr7	+	2902	6	ISM	ENSMUSG00000078786.10_ENSMUSG00000080533.3	ENSMUST00000179391.8	1748	7	1447	-1803	105	468	3prime_fragment	FALSE	canonical	2	9	junction_4	4.47213595499958	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCTAACTTCTCCATC	NA	False	NA	17	True	AATAAA	-19	NA	26896652	26905548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
Isoform_67740_122	chr7	+	2189	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	-12	4	-12	1	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932435	26957371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_67742_3	chr7	+	2144	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	134	-2	-14	1	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932771	26957371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_67743_3	chr7	+	1879	12	ISM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	646	-1	498	0	3prime_fragment	FALSE	canonical	3	76	junction_4	14.8507728602068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26933283	26957370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_67744_167	chr7	+	2707	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	53	0	-5	0	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	9	True	AATAAA	-18	NA	26958202	26981566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
Isoform_67747_10	chr7	+	2052	4	ISM	ENSMUSG00000063160.13	ENSMUST00000134215.2	3153	9	12532	-160	12532	0	3prime_fragment	FALSE	canonical	3	88	junction_2	6.79869268479038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	9	True	AATAAA	-18	NA	26973334	26981566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
Isoform_67749_7	chr7	+	531	3	FSM	ENSMUSG00000040466.17	ENSMUST00000133750.8	509	3	-25	3	-3	-3	multi-exon	FALSE	canonical	2	274	junction_1	60	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCACTGAGCACCAACT	NA	False	NA	6	True	ATTAAA	-19	NA	27147453	27159185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27147622_27158680_27158846_27158987
Isoform_67750_289	chr7	+	820	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	51	157	-3	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	49	True	NA	NA	NA	27147453	27165412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
Isoform_67752_7	chr7	+	897	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	-28	159	-28	1	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCTCTCTCTGTCTG	NA	False	NA	47	True	AATAAA	-44	NA	27147374	27165410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
Isoform_67753_4	chr7	+	971	4	NIC	ENSMUSG00000040466.17	novel	1028	5	NA	NA	-13	2	intron_retention	FALSE	canonical	2	274	junction_1	76.027772703284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTCTCTCTGTCTGT	NA	False	NA	48	True	AATAAA	-45	NA	27147443	27165411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_27147622_27158680_27159078_27161991_27162121_27165144
Isoform_67754_64	chr7	+	1325	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	0	4	0	-4	multi-exon	FALSE	canonical	3	104	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGGAATTGTAATTAA	NA	False	NA	80	True	AATAAA	-12	NA	27173192	27176785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27173297_27175564
Isoform_67755_6	chr7	+	1652	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	-327	4	-327	-4	multi-exon	FALSE	canonical	3	104	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGGAATTGTAATTAA	NA	False	NA	80	True	AATAAA	-12	NA	27172865	27176785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27173297_27175564
Isoform_67756_71	chr7	+	1182	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	43	8	43	-8	multi-exon	FALSE	canonical	3	24	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCAAGTGTGTGTGCTT	6632	False	NA	4	True	ATTAAA	-14	NA	27186377	27189733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27186504_27188677
Isoform_67757_7	chr7	+	1238	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	-13	8	-13	-8	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCAAGTGTGTGTGCTT	6576	False	NA	4	True	ATTAAA	-14	NA	27186321	27189733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27186504_27188677
Isoform_67758_13	chr7	+	4667	7	FSM	ENSMUSG00000053198.15	ENSMUST00000098644.9	4841	7	1	173	1	0	multi-exon	FALSE	canonical	2	4	junction_1	15.3124858276578	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	1762	False	NA	NA	False	AATAAA	-15	NA	27198749	27219466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27198791_27203957_27204002_27204089_27204189_27204304_27204432_27207371_27207529_27214675_27214873_27215464
Isoform_67760_21	chr7	+	4464	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	27	6	27	1	multi-exon	FALSE	canonical	3	33	junction_2	5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCATGTGTCTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	27207257	27219460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27207529_27214675_27214873_27215464
Isoform_67761_3	chr7	+	1952	4	Fusion	ENSMUSG00000040424.16_ENSMUSG00000053198.15	novel	2926	3	NA	NA	44	4	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGCCTGTTACCACTG	NA	False	NA	NA	False	AATAAA	-18	NA	27207274	27230604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_27207529_27227720_27228078_27228373_27229223_27230112
Isoform_67762_3	chr7	+	4229	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	7415	0	7415	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27214645	27219466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_27214873_27215464
Isoform_67763_7	chr7	+	2487	4	FSM	ENSMUSG00000040424.16	ENSMUST00000108353.9	2409	4	-73	-5	-73	5	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGTTACCACTGG	NA	False	NA	NA	False	AATAAA	-19	NA	27222618	27230605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27223407_27227720_27228078_27228373_27229223_27230112
Isoform_67764_278	chr7	+	2682	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	17	2	17	-2	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTGTCTGTGTAT	413	False	NA	NA	False	AATAAA	-18	NA	27252674	27281522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
Isoform_67773_9	chr7	+	2727	10	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	17	1	intron_retention	FALSE	canonical	3	32	junction_7	97.9850076715569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTGTGTCTGTGT	413	False	NA	NA	False	AATAAA	-16	NA	27252674	27281520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
Isoform_67776_10	chr7	+	2043	4	FSM	ENSMUSG00000049643.16	ENSMUST00000186501.2	340	4	-28	-1675	-28	1	multi-exon	FALSE	canonical	3	27	junction_1	145.525102836437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTGTGTCTGTGT	7106	False	NA	NA	False	AATAAA	-16	NA	27273863	27281520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27273927_27274015_27274166_27278137_27278209_27279761
Isoform_67777_9	chr7	+	3871	13	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	-29	-1	-29	1	intron_retention	FALSE	canonical	3	377	junction_6	56.056704921594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGTCCACATTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27291141	27338876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516
Isoform_67778_552	chr7	+	2993	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	174	1377	-20	-1	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCCAGTCCACATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	27291150	27338874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
Isoform_67790_3	chr7	+	495	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	121	3996	121	-1579	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTACTTTTAGTGATG	NA	False	NA	11	True	AGTAAA	-15	NA	27388885	27401913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_67791_5	chr7	+	3880	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	0	2016	0	1225	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGGCTCCATT	NA	False	NA	34	True	NA	NA	NA	27430813	27451111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_67792_4	chr7	+	4452	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	5	1439	5	-1439	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	27430818	27451688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
Isoform_67794_20	chr7	+	3469	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-42	10	-42	-10	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGCAAAATAAATA	366	False	NA	NA	False	NA	NA	NA	27537989	27555853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_67795_35	chr7	+	3763	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	10	-336	10	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	418	False	NA	-1	True	NA	NA	NA	27538041	27556199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_67796_3	chr7	+	3885	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	10	-458	10	458	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGGAGAAAAAAGAGAA	418	False	NA	5	True	NA	NA	NA	27538041	27556321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
Isoform_67798_6	chr7	+	565	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	-21	2967	-21	-1709	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTTGATCTCAAGATT	3306	False	NA	3	True	AATAAA	-12	NA	27559988	27577283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
Isoform_67799_3	chr7	+	3343	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	18	150	18	-150	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGGACTGAGTGAGTG	3345	False	NA	NA	False	NA	NA	NA	27560027	27580100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
Isoform_678_9	chr10	-	2087	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	19	23	0	3	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATAGCTTTGTTTAGT	NA	False	NA	NA	False	AATAAA	-11	NA	13428864	13399882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_67800_3	chr7	+	1032	3	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	32565	-15	32565	-1	3prime_fragment	FALSE	canonical	3	5	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTCTCCTGCTGTC	1202	False	NA	NA	False	AATAAA	-14	NA	27861805	27864235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_27862400_27863693_27863966_27864069
Isoform_67801_726	chr7	+	1156	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	41	0	-16	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8572	False	NA	0	True	ATTAAA	-14	NA	27869175	27878694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
Isoform_67802_186	chr7	+	1208	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8520	False	NA	0	True	ATTAAA	-14	NA	27869123	27878694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
Isoform_67806_6	chr7	+	2476	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	56	2	31	-2	multi-exon	FALSE	canonical	2	7	junction_5	4.15210789840534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTGAGCGTTTG	NA	False	NA	NA	False	AGTAAA	-12	NA	27878949	27886717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
Isoform_67807_3	chr7	+	2415	12	NNC	ENSMUSG00000002409.19	novel	2534	11	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.32730375417586	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	27878925	27886716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
Isoform_67808_8	chr7	+	2419	11	FSM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	-31	-370	-6	-1	multi-exon	TRUE	canonical	0	0	junction_8	5.57135531087365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	NA	False	NA	NA	False	AGTAAA	-13	NA	27878887	27886718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
Isoform_6781_27	chr11	-	2002	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-12	4	-12	-4	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGTTTAACTTGATT	NA	False	NA	-6	True	AATAAA	-21	NA	96834824	96828654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
Isoform_67813_6516	chr7	+	553	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	97	459	-14	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	6516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
Isoform_67814_1553	chr7	+	589	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	61	459	-50	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050137	28052121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
Isoform_67824_185	chr7	+	1962	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	36	5	25	0	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	605	False	NA	15	True	AATAAA	-16	NA	28092411	28098808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_67825_6	chr7	+	2126	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	13	-136	2	136	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTTTTG	582	False	NA	NA	False	AAGAAA	-22	NA	28092388	28098949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_67826_4	chr7	+	2065	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	164	junction_5	17.6562469272367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	582	False	NA	19	True	AATAAA	-20	NA	28092388	28098812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_67827_4	chr7	+	2043	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	23	-1	intron_retention	FALSE	canonical	3	173	junction_4	15.3803626600791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	603	False	NA	19	True	AATAAA	-20	NA	28092409	28098812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_67828_4	chr7	+	2053	13	FSM	ENSMUSG00000003437.15	ENSMUST00000122857.8	1997	13	-54	-2	25	2	multi-exon	FALSE	canonical	3	164	junction_4	16.6205612286576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCTAAAGTCTCTGT	605	False	NA	17	True	AATAAA	-18	NA	28092411	28098810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
Isoform_67829_102	chr7	+	623	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	35	-1	-5	1	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGGTATCTGCAAAATC	1850	False	NA	NA	False	AATAAA	-27	NA	28136906	28145972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_67830_13	chr7	+	610	7	FSM	ENSMUSG00000060791.16	ENSMUST00000078845.13	637	7	34	-7	34	0	multi-exon	FALSE	canonical	3	32	junction_1	149.1011029097	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACATGGTATCTGCAAAAT	180	False	NA	NA	False	AATAAA	-26	NA	28140385	28145971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28140467_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
Isoform_67831_8	chr7	+	3249	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3972	False	NA	27	True	ATTAAA	-31	NA	28151398	28167666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_67832_3	chr7	+	3286	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-59	-17	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGGCTCTGCTGACCA	3919	False	NA	11	True	ATTAAA	-15	NA	28151345	28167650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_67833_4	chr7	+	1199	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.975985582694	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGGTTTTTTTTGTTTG	8825	False	NA	NA	False	GATAAA	-14	NA	28392253	28397383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397053
Isoform_67834_8	chr7	+	1966	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	12.2637677734047	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	8825	False	NA	NA	False	AATAAA	-16	NA	28392253	28398760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_67835_21	chr7	+	1974	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-21	5	-21	1	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTTTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	28416207	28437564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
Isoform_67837_22	chr7	+	1840	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-33	-1	-5	1	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTTTTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	28416223	28437564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
Isoform_67838_6	chr7	+	1640	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	-84	7	-15	-1	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	28416213	28437562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
Isoform_67839_7	chr7	+	2290	16	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	-18	intron_retention	FALSE	canonical	1	1	junction_2	77.3601677580624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCTGGATCCATGAG	278	False	NA	7	True	AATAAA	-15	NA	28441426	28453278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28441708_28443666_28443763_28443985_28444145_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_67840_232	chr7	+	1864	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-12	16	-2	-16	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGGATCCATGAGCA	266	False	NA	9	True	AATAAA	-17	NA	28441414	28453280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_67841_19	chr7	+	3079	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-12	-1199	-2	1199	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCCATAAAAC	266	False	NA	NA	False	NA	NA	NA	28441414	28454495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_67842_8	chr7	+	2151	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-10	-18	intron_retention	TRUE	canonical	3	180	junction_5	20.6265382852444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCTGGATCCATGAG	258	False	NA	7	True	AATAAA	-15	NA	28441406	28453278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
Isoform_67843_5	chr7	+	1765	17	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.8280934555712	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGACTTGTGTGGCC	NA	False	NA	9	True	ATTAAA	-18	NA	28466234	28488082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487683_28487714
Isoform_67845_18	chr7	+	1731	16	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.6903513079115	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGACTTGTGTGGCC	NA	False	NA	9	True	ATTAAA	-18	NA	28466221	28488082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487681_28487712
Isoform_67846_4	chr7	+	1785	16	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.6903513079115	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGACTTGTGTGGCC	NA	False	NA	9	True	ATTAAA	-18	NA	28466167	28488082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341_28487683_28487714
Isoform_67848_53	chr7	+	2106	5	ISM	ENSMUSG00000051735.8	ENSMUST00000059857.8	2871	12	7017	-1	-952	1	3prime_fragment	FALSE	canonical	3	40	junction_1	3.11247489949718	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGGTGCAGACCTGTAA	NA	False	NA	13	True	AATAAA	-23	NA	28495410	28498389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
Isoform_67852_44	chr7	+	2457	6	FSM	ENSMUSG00000015165.17	ENSMUST00000174755.8	2426	6	-3	-28	0	4	multi-exon	FALSE	canonical	3	5544	junction_4	444.492249651217	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAGAAAACAGACCT	NA	False	NA	NA	False	NA	NA	NA	28510361	28516389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704
Isoform_67855_55	chr7	+	2140	14	NIC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	153	junction_7	2075.84428107937	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510361	28521666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_67858_2392	chr7	+	2069	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	48	25	1	1	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510362	28521666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_67859_844	chr7	+	2116	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	1	25	1	1	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510315	28521666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_67864_190	chr7	+	2227	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	-46	-1	1	1	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510315	28521666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_67865_478	chr7	+	2179	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	2	-1	-1	1	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTATTTGCTGGG	NA	False	NA	8	True	AATAAA	-11	NA	28510363	28521666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
Isoform_6787_62	chr11	-	2877	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	44	1	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTGTAACTGCTTGA	NA	False	NA	-10	True	ATTAAA	-17	NA	96868493	96844297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_67878_406	chr7	+	1175	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	92	0	-40	0	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGTGTCTTTACTGCAG	NA	False	NA	14	True	AATAAA	-12	NA	28524733	28531672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
Isoform_6788_43	chr11	-	3010	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	44	2	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGCGTTTGGCAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	96868493	96844164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_67880_3	chr7	+	3040	21	FSM	ENSMUSG00000054083.9	ENSMUST00000066880.6	3040	21	22	-22	22	22	multi-exon	FALSE	canonical	0	0	junction_20	1.10792599030802	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGTCTTAAGTTTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	28580868	28593010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586044_28586122_28586198_28586997_28587162_28587244_28587481_28587843_28587856_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
Isoform_67881_80	chr7	+	2706	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	17	1	-16	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	NA	False	NA	21	True	AATAAA	-26	NA	28682269	28702702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67882_24	chr7	+	2760	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-39	3	-39	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCTCGGAGGAGAGAT	NA	False	NA	19	True	AATAAA	-24	NA	28682213	28702700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67883_5	chr7	+	2859	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-136	1	-136	1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	NA	False	NA	21	True	AATAAA	-26	NA	28682116	28702702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67884_3	chr7	+	3445	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-726	5	52	-1	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATTCTCGGAGGAGAG	NA	False	NA	17	True	AATAAA	-22	NA	28681526	28702698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67886_3	chr7	+	498	6	NNC	ENSMUSG00000037337.12	novel	523	5	NA	NA	-194	1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	64.9966152964906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGGAGGAGAGATTT	6768	False	NA	21	True	AATAAA	-26	NA	28700772	28702702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28700810_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67887_3	chr7	+	689	5	FSM	ENSMUSG00000037337.12	ENSMUST00000208784.2	523	5	-166	0	-166	0	multi-exon	FALSE	canonical	3	158	junction_2	9.82344135219425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTCGGAGGAGAGA	6796	False	NA	18	True	AATAAA	-23	NA	28700800	28702699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
Isoform_67888_28	chr7	+	2024	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2702	2340	2562	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	15.5905954558082	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	20	True	AAAAAG	-19	NA	28837059	28851046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_67889_13	chr7	+	2036	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2702	3	2562	-1	3prime_fragment	TRUE	non_canonical	0	0	junction_2	17.9245331567907	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGACTGCCAGTCACAC	415	False	NA	17	True	AAAAAG	-16	NA	28837059	28851043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_6789_8	chr11	-	2940	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTGTAACTGCTTGA	NA	False	NA	-10	True	ATTAAA	-17	NA	96868556	96844297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_67890_4	chr7	+	2956	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2707	-922	2567	1	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGGTTCATAGTGTTGA	420	False	NA	NA	False	ACTAAA	-15	NA	28837064	28851968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_67891_3	chr7	+	2688	15	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2562	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	15.1596941437026	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGACTGCCAGTCACAC	415	False	NA	17	True	AAAAAG	-16	NA	28837059	28851043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849346_28849482_28849603_28849717_28850870
Isoform_67892_3	chr7	+	3700	14	NIC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2562	2	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGGTTCATAGTGTTGAG	415	False	NA	NA	False	ACTAAA	-16	NA	28837059	28851969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_67893_8	chr7	+	2775	14	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2562	0	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCCAGTCACACT	415	False	NA	18	True	AAAAAG	-17	NA	28837059	28851044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_67894_3	chr7	+	2605	12	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2565	0	intron_retention	FALSE	canonical	3	10	junction_1	14.2915336435352	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	418	False	NA	20	True	AAAAAG	-19	NA	28837062	28851046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28837151_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
Isoform_67895_629	chr7	+	1109	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	17	0	-7	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6054	False	NA	12	True	AATAAA	-15	NA	28937770	28946954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_67896_10	chr7	+	968	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	581.164826495509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6039	False	NA	12	True	AATAAA	-15	NA	28937755	28946954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
Isoform_67898_185	chr7	+	1113	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6059	False	NA	12	True	AATAAA	-15	NA	28937775	28946954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_679_3	chr10	-	2215	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	84	-170	65	-99	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCTGTGGTTCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	13428799	13399689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_6790_5	chr11	-	3059	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTCTGCGTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	96868544	96844166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
Isoform_67900_32	chr7	+	1098	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	515.665569523346	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6192	False	NA	12	True	AATAAA	-15	NA	28937908	28946954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_67905_42	chr7	+	1138	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	482.335940174142	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6200	False	NA	12	True	AATAAA	-15	NA	28937916	28946954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
Isoform_67907_24	chr7	+	544	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-4	410	0	-410	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCCGGATTTTCC	4003	False	NA	8	True	NA	NA	NA	28988732	28992816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
Isoform_67908_8	chr7	+	2336	12	FSM	ENSMUSG00000030584.15	ENSMUST00000108231.8	2040	12	25	-321	0	1	multi-exon	FALSE	canonical	3	12	junction_10	19.1570283587301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	1789	False	NA	7	True	ATTAAA	-23	NA	29003400	29017010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
Isoform_67909_32	chr7	+	2314	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	-6	1	-6	-1	multi-exon	TRUE	canonical	3	46	junction_7	12.1008161735527	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCATCTCTAACCT	1783	False	NA	9	True	ATTAAA	-25	NA	29003394	29017012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_6791_13	chr11	-	3024	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	33	-2	33	2	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGCGTTTGGCAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	96868504	96844164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
Isoform_67912_12	chr7	+	1542	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	17.2568826848884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGGAAAAAAATTA	1806	False	NA	NA	False	AAAAAG	-13	NA	29003417	29016314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_67913_9	chr7	+	2234	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	23	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	17.2568826848884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCATCTCTAACCT	1812	False	NA	9	True	ATTAAA	-25	NA	29003423	29017012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_67914_8	chr7	+	2290	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	-34	-682	-34	1	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCTTCCATCTCTAAC	5791	False	NA	7	True	ATTAAA	-23	NA	29007402	29017010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_67918_3	chr7	+	2196	11	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	20.5338744517444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATCTCTAACCTCTTTT	5841	False	NA	14	True	ATTAAA	-30	NA	29007452	29017017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
Isoform_67920_34	chr7	+	2201	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	51	1861	51	-1861	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTCTATTACCAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	29468027	29477385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_67922_14	chr7	+	2991	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	51	1071	51	-1071	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGCTTTTTCCAAA	NA	False	NA	NA	False	AATAAA	-14	NA	29468027	29478175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
Isoform_67924_29	chr7	+	3472	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-34	-62	-29	-3	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATTGAGTTAATTTC	NA	False	NA	NA	False	AAGAAA	-15	NA	29515509	29530427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_67925_9	chr7	+	4519	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-43	-1100	-38	1035	multi-exon	TRUE	canonical	3	32	junction_1	5.78791845139511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTATTTTTAAAGAATT	NA	False	NA	10	True	AATAAA	-23	NA	29515500	29531465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_67926_6	chr7	+	3367	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-14	3	-14	-3	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATTGAGTTAATTTC	NA	False	NA	NA	False	AAGAAA	-15	NA	29515524	29530427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
Isoform_67927_4	chr7	+	2326	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	5	206	5	-206	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCGTTGCTGTGATATA	NA	False	NA	NA	False	ATTAAA	-11	NA	29559408	29575724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
Isoform_67928_13	chr7	+	2582	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	32	0	32	0	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	29607973	29616232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
Isoform_67929_11	chr7	+	1016	4	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	0	246	combination_of_known_junctions	FALSE	canonical	3	234	junction_3	16.0485374896143	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATATTCATGTTTCT	NA	False	NA	NA	False	AAGAAA	-18	NA	29683379	29688923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473
Isoform_6793_21	chr11	-	1398	3	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	44	-6517	combination_of_known_splicesites	FALSE	canonical	3	301	junction_2	103	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAACAGCAAGAATGAGA	NA	False	NA	-10	True	AATAAA	-22	NA	96868493	96851561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_96852836_96854190_96854268_96868446
Isoform_67931_12	chr7	+	4024	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-18	-6	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	29683361	29724530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_67932_5	chr7	+	4213	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	0	201	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAACTAACAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	29683379	29724737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_67934_5	chr7	+	4030	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-27	-6	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	59.6777353689417	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	29683352	29724530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
Isoform_67936_37	chr7	+	3614	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	390	2	-1	1	multi-exon	FALSE	canonical	3	89	junction_1	24	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTTGTTGTTTTCCTT	NA	False	NA	11	True	NA	NA	NA	29794608	29807045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29794637_29798952_29799148_29803654
Isoform_6794_4	chr11	-	1423	3	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	4944	-6518	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	251	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAACAGCAAGAATGAG	NA	False	NA	-11	True	AATAAA	-21	NA	96854547	96851562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_96852836_96854190_96854268_96854474
Isoform_67940_5	chr7	+	2367	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	5	-255	5	255	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGGATTGTTACTATA	5264	False	NA	NA	False	TATAAA	-10	NA	29821371	29834630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_67942_4	chr7	+	2152	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-40	5	-40	-5	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATTTGAAAATGAA	5219	False	NA	NA	False	NA	NA	NA	29821326	29834370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_67944_6	chr7	+	2102	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	10	5	10	-5	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATTTGAAAATGAA	5269	False	NA	NA	False	NA	NA	NA	29821376	29834370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_67945_3	chr7	+	3959	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-14	-1828	-14	1828	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTAGTGTATGAGGT	5245	False	NA	NA	False	NA	NA	NA	29821352	29836203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
Isoform_67946_4	chr7	+	2363	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	12	261	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTACTATATGTTCT	5271	False	NA	NA	False	TATAAA	-16	NA	29821378	29834636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
Isoform_67948_124	chr7	+	343	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	49	1	-1	-1	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5723	False	NA	23	True	AATAAA	-24	NA	29883617	29885454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
Isoform_67949_47	chr7	+	370	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	22	1	22	-1	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5696	False	NA	23	True	AATAAA	-24	NA	29883590	29885454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
Isoform_6795_5	chr11	-	1403	3	ISM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	38	7399	38	-6521	5prime_fragment	FALSE	canonical	3	58	junction_2	224.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATATAACAGCAAGAAT	NA	False	NA	-14	True	AATAAA	-18	NA	96868499	96851565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_96852836_96854190_96854271_96868446
Isoform_67950_9	chr7	+	437	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	-1	49	-1	-1	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCAGCCTGTGTG	5723	False	NA	23	True	AATAAA	-24	NA	29883617	29885454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
Isoform_67951_91	chr7	+	856	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	-40	3	-40	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931332	29932812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
Isoform_67952_178	chr7	+	444	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	372	3	-12	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931744	29932812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
Isoform_67953_3	chr7	+	537	5	NIC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-20	0	intron_retention	FALSE	canonical	3	1146	junction_4	33.3391661563393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931736	29932812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932544_29932709
Isoform_67954_6	chr7	+	516	5	FSM	ENSMUSG00000019738.16	ENSMUST00000138118.8	435	5	-19	-62	-1	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.6717259162333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931755	29932812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_29931830_29931906_29931962_29932174_29932407_29932491_29932544_29932709
Isoform_67955_10	chr7	+	1006	7	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	165.266451526013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTTGGATTTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	30008200	30013727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011930_30012133_30013343
Isoform_67956_140	chr7	+	928	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	50	4	-10	-3	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTCGTTTTGGATTTTT	NA	False	NA	5	True	AATAAA	-12	NA	30008191	30013725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
Isoform_67957_3	chr7	+	803	6	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	89	junction_5	143.61615508013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTTGGATTTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	30008201	30013727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30013343
Isoform_67958_5	chr7	+	1248	7	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	9	junction_5	204.263446449813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTTGGATTTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	30008201	30013727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30012897_30013024_30013343
Isoform_67959_80	chr7	+	1134	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-21	-1	-10	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008191	30013729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
Isoform_6796_15	chr11	-	2481	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	3	4	3	-4	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACGCCCTCCTTCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	97006154	96988900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
Isoform_67960_3	chr7	+	1055	5	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	12	junction_1	201.561870154055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008191	30013729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30008260_30009410_30009480_30011264_30011326_30011661_30012133_30013343
Isoform_67961_53	chr7	+	1319	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	31	5	-24	1	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTCTGAGAATATCA	NA	False	NA	6	True	ATTAAA	-13	NA	30014271	30018466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
Isoform_67962_5	chr7	+	1391	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	13	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_5	74.7905920090303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014253	30018470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016567_30017392_30017468_30018097_30018157_30018248
Isoform_67963_6	chr7	+	2301	6	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	156	junction_2	32.932658562588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTCTGAGAATATCA	NA	False	NA	6	True	ATTAAA	-13	NA	30014240	30018466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017468_30018097_30018157_30018248
Isoform_67964_8	chr7	+	1273	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTCTGAGAATATCA	NA	False	NA	6	True	ATTAAA	-13	NA	30014252	30018466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
Isoform_67965_8	chr7	+	2010	12	FSM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	4	0	4	0	multi-exon	FALSE	canonical	2	3	junction_1	5.20965410250706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGGTGTCATTAAA	NA	False	NA	16	True	ATTAAA	-16	NA	30121160	30128171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
Isoform_67966_5	chr7	+	2885	19	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	5570	-7	5570	7	3prime_fragment	FALSE	canonical	2	33	junction_1	11.515555769973	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTTCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	30164719	30186655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_67968_3	chr7	+	2404	17	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	6260	10	6260	-10	3prime_fragment	FALSE	canonical	2	34	junction_3	11.1943065886191	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	30165409	30186638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
Isoform_67969_3	chr7	+	1283	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	16	-1	16	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251964	30254865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30252153_30253686_30253810_30253893
Isoform_6797_6	chr11	-	3320	10	FSM	ENSMUSG00000038517.16	ENSMUST00000118375.8	3288	10	-28	-4	-26	0	multi-exon	FALSE	canonical	3	15	junction_9	16.2343942158479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7505	False	NA	-2	True	AATAAA	-17	NA	97040900	97026998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
Isoform_67970_6	chr7	+	2087	3	FSM	ENSMUSG00000106236.3_ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	-728	4	16	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGCCTTATGTCTGGG	NA	False	NA	8	True	AATAAA	-16	NA	30251964	30254864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30252958_30253686_30253810_30253893
Isoform_67971_7	chr7	+	852	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	193.245851659676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262725	30264788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_67972_3	chr7	+	823	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163330.3	583	8	-2	-238	-2	1	multi-exon	FALSE	canonical	3	25	junction_1	197.894529732277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262729	30264788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30262775_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_67973_44	chr7	+	863	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	19	2	0	1	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGGTTTCCTTCCA	NA	False	NA	34	True	AATAAA	-22	NA	30262764	30264788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_67974_4	chr7	+	3031	10	FSM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	-23	-1	-23	-1	multi-exon	FALSE	canonical	3	13	junction_8	228.074549215821	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCCTGTCCTCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	30262745	30267384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
Isoform_67975_4	chr7	+	1038	7	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	411	junction_1	82.4386977631797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262760	30264787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
Isoform_67976_3	chr7	+	838	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	181.681713163321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGTCTGTGGTTTCCT	NA	False	NA	30	True	AATAAA	-18	NA	30262760	30264784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_67977_4	chr7	+	853	8	NIC	ENSMUSG00000078765.12	novel	860	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	195.900745380962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGTCTGTGGTTTCCT	NA	False	NA	30	True	AATAAA	-18	NA	30262754	30264784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30262834_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
Isoform_67978_10	chr7	+	1109	7	Fusion	ENSMUSG00000046056.16_ENSMUSG00000097320.9	novel	1276	6	NA	NA	11	0	multi-exon	FALSE	canonical	1	1	junction_4	6.02771377334171	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGGCTCACTGTGCT	537	False	NA	19	True	AATAAA	-21	NA	30429014	30455556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
Isoform_67979_27	chr7	+	457	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	0	13	0	1	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCTGAATCTGTGT	NA	False	NA	10	True	AATAAA	-15	NA	30487329	30490509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
Isoform_6798_12	chr11	-	3276	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	14.4990421139544	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGCTCAGGCTGTGCTT	6168	False	NA	0	True	AATAAA	-19	NA	97042237	97026996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_67980_6	chr7	+	404	6	FSM	ENSMUSG00000074199.8	ENSMUST00000190990.7	403	6	0	-1	0	1	multi-exon	FALSE	canonical	3	20	junction_5	24.1694021440333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCTGAATCTGTGT	NA	False	NA	10	True	AATAAA	-15	NA	30487329	30490509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490397
Isoform_67981_3	chr7	+	1662	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	4	2509	4	2146	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAAATGGTTTAATG	NA	False	NA	NA	False	AATAAA	-21	NA	33933805	33937123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_33933921_33935576
Isoform_67982_3	chr7	+	690	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	6	3479	6	1176	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCAAGTTATTTTACT	NA	False	NA	NA	False	ATTAAA	-13	NA	33933807	33936153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_33933921_33935576
Isoform_67984_547	chr7	+	1851	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	30	0	30	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	34611833	34744133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
Isoform_67987_24	chr7	+	3400	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	105	3	-55	1	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTTTTTCTTTTGC	NA	False	NA	23	True	AATAAA	-23	NA	35033699	35091711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_67988_29	chr7	+	3361	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	144	3	-16	1	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTTTTTCTTTTGC	NA	False	NA	23	True	AATAAA	-23	NA	35033738	35091711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_6799_7	chr11	-	3375	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	14.4990421139544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6067	False	NA	-2	True	AATAAA	-17	NA	97042338	97026998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_67993_4	chr7	+	2007	16	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	21	9351	21	1124	5prime_fragment	FALSE	canonical	2	65	junction_12	25.8049090936847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGTGACTTTAAGACTA	NA	False	NA	NA	False	TATAAA	-16	NA	35096500	35128763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581
Isoform_67994_23	chr7	+	2519	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	28	8234	8	-2121	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATATTGTCTGTACTCA	NA	False	NA	11	True	AATAAA	-17	NA	35096487	35129878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
Isoform_67995_141	chr7	+	2601	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	7	2	7	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096486	35138112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
Isoform_67997_36	chr7	+	2492	17	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	-14	-2119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.1628732647685	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTGTCTGTACTCAGT	NA	False	NA	13	True	AATAAA	-19	NA	35096517	35129880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
Isoform_67998_95	chr7	+	2597	19	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	36.9808091706169	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096491	35138112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
Isoform_67999_19	chr7	+	1343	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-2	949	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	38.1133585396715	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	35096529	35121608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35121492
Isoform_68_171	ERCC-00092	+	1107	1	FSM	ERCC-00092A	DQ459425	1108	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00092_+_0_1100
Isoform_6800_6	chr11	-	3079	8	ISM	ENSMUSG00000038517.16	ENSMUST00000066078.12	3338	9	551	2	551	0	3prime_fragment	FALSE	canonical	3	33	junction_5	11.2938487863156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	8418	False	NA	-2	True	AATAAA	-17	NA	97039987	97026998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770
Isoform_68000_7	chr7	+	1452	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	12	949	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	40.0712175924172	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	35096491	35121608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120455_35121492
Isoform_68003_4	chr7	+	2385	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	31	-490	4	490	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTCTAAGATTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	35285705	35309029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
Isoform_68006_102	chr7	+	4243	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	40	1	7	-1	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285708	35338650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
Isoform_68007_8	chr7	+	4228	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	2	12	junction_20	54.7169546878799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285676	35338648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
Isoform_68008_60	chr7	+	2127	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	179	976	-16	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	9	True	TTTAAA	-5	NA	37883256	37896016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_37883325_37888030_37888202_37894128
Isoform_68009_5	chr7	+	3115	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	163	4	-32	-4	multi-exon	FALSE	canonical	3	43	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCACTCTCTGTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	37883240	37896988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_37883325_37888030_37888202_37894128
Isoform_6801_23	chr11	-	3372	10	NIC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	13.1487219488773	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCGCTCAGGCTGT	6071	False	NA	-4	True	AATAAA	-15	NA	97042334	97027000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
Isoform_68010_4	chr7	+	5220	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-25	10826	-24	4553	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCTGGAGGTTCTGTTT	NA	False	NA	17	True	AATAAA	-20	NA	39201899	39219187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
Isoform_68011_4	chr7	+	4055	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGGGTAATGAATT	NA	False	NA	42	True	AATAAA	-24	NA	41248729	41277954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
Isoform_68012_16	chr7	+	3985	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	19	0	-5	0	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248703	41277957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
Isoform_68014_8	chr7	+	296	3	ISM	ENSMUSG00000107181.2	ENSMUST00000201257.2	378	4	-6	3765	-6	-3765	5prime_fragment	FALSE	canonical	3	101	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGATAGAAGATATGGAA	NA	False	NA	5	True	NA	NA	NA	42727468	42742078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_42727598_42741712_42741840_42742038
Isoform_68015_3	chr7	+	555	4	ISM	ENSMUSG00000064194.11	ENSMUST00000200973.4	578	5	-40	214	-5	-214	5prime_fragment	FALSE	canonical	3	27	junction_3	183.238157113147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATCATTGCAGGCACAAA	NA	False	NA	NA	False	NA	NA	NA	42827006	42838712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466
Isoform_68016_14	chr7	+	511	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	2607	-6	0	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAGCTATCTTCGAA	NA	False	NA	NA	False	NA	NA	NA	42827005	42838926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
Isoform_68017_7	chr7	+	1886	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-2	-456	-2	456	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTTGTAAATATATCC	9996	False	NA	-7	True	AATAAA	-23	NA	42863460	42876722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
Isoform_68018_9	chr7	+	412	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-5	1021	-5	-512	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCGGAAGTCTTTCAA	9993	False	NA	NA	False	NA	NA	NA	42863457	42875245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
Isoform_68022_1115	chr7	+	826	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	47	20	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGCCTCTTTCCTCA	1955	False	NA	32	True	AATAAA	-15	NA	43093553	43107204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
Isoform_68023_51	chr7	+	868	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	6	19	6	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGCCTCTTTCCTCAT	1914	False	NA	33	True	AATAAA	-16	NA	43093512	43107205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
Isoform_68026_4	chr7	+	3176	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	134	1184	105	-1184	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	7401	False	NA	3	True	NA	NA	NA	43229167	43241475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
Isoform_68027_3	chr7	+	3312	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-4	1186	-4	-1186	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGCTGGATAGTAA	7263	False	NA	1	True	NA	NA	NA	43229029	43241473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
Isoform_68029_12	chr7	+	2403	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-43	2	13	-2	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCCACATTCATCCATT	2849	False	NA	5	True	AATAAA	-19	NA	43256605	43267707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_68031_9	chr7	+	2369	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-80	73	-24	-4	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2812	False	NA	3	True	AATAAA	-11	NA	43256568	43267636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_68033_18	chr7	+	2412	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	-24	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2812	False	NA	3	True	AATAAA	-11	NA	43256568	43267636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_68035_11	chr7	+	2446	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCCACATTCATCCATT	2849	False	NA	5	True	AATAAA	-19	NA	43256605	43267707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
Isoform_68036_167	chr7	+	2472	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	1	2	1	-2	multi-exon	FALSE	canonical	3	64	junction_1	1	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTTTTTGGTCTGGTG	NA	False	NA	6	True	NA	NA	NA	43321440	43327720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43321500_43324527_43325071_43325850
Isoform_68037_3	chr7	+	1098	6	FSM	ENSMUSG00000054046.8	ENSMUST00000066834.8	1809	6	-69	780	-69	-780	multi-exon	FALSE	canonical	2	4	junction_1	24.8161237907938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43361921	43376178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43362129_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
Isoform_68038_16	chr7	+	1338	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	33	2	33	-2	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCCAATGTGTGTGCCT	388	False	NA	7	True	ATTAAA	-14	NA	43430491	43434832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
Isoform_68040_10	chr7	+	855	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	467	0	448	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3344	False	NA	28	True	AATAAA	-18	NA	43447467	43453246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
Isoform_68041_9	chr7	+	927	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	22	5	22	-5	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTCAAGTTCTGACA	NA	False	NA	2	True	AATAAA	-16	NA	43874805	43879037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
Isoform_68042_16	chr7	+	866	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	83	5	0	-5	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTCAAGTTCTGACA	NA	False	NA	2	True	AATAAA	-16	NA	43874866	43879037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
Isoform_68043_76	chr7	+	2229	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896210	43901741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68046_50	chr7	+	2077	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	52	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68047_17	chr7	+	2169	7	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	324.736303278008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_43896233_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68048_44	chr7	+	2214	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	340.047415661344	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43896233_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68050_50	chr7	+	2064	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	33	-1338	0	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68052_13	chr7	+	2048	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-12	-1360	0	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68053_64	chr7	+	1898	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	59	-1173	0	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68055_100	chr7	+	2242	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68058_93	chr7	+	2094	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	-2	0	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896210	43901741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68059_25	chr7	+	2180	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_3	313.179084373285	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_43896248_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68060_62	chr7	+	2229	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	0	-1241	0	0	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68062_54	chr7	+	2079	7	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68064_35	chr7	+	2063	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	349.374997515404	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68067_253	chr7	+	1913	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	65	4	0	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68068_27	chr7	+	1999	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896210	43901737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
Isoform_68077_3	chr7	+	2516	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118831.8	2627	11	-49	160	3	-2	multi-exon	FALSE	canonical	0	0	junction_2	6.15142259969188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCCACCTGTCTCCCTG	NA	False	NA	14	True	AATAAA	-16	NA	44033528	44049451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44033601_44034229_44034374_44035352_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_68078_3	chr7	+	2476	11	NIC	ENSMUSG00000030731.14	novel	2494	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	5.91692487699481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44033549	44049454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44033601_44034229_44034374_44035374_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_68079_12	chr7	+	2493	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	2	-1	2	1	multi-exon	FALSE	canonical	2	9	junction_1	3.88458491991101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44033527	44049454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44033601_44034229_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
Isoform_68081_6	chr7	+	1365	9	FSM	ENSMUSG00000002204.10	ENSMUST00000002274.10	1560	9	176	19	124	-19	multi-exon	FALSE	canonical	1	2	junction_5	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAATTAAAAAAAAAAAT	2718	False	NA	NA	False	NA	NA	NA	44221979	44236267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44222114_44230627_44230764_44230844_44230969_44231106_44231226_44231765_44231966_44234422_44234546_44234642_44234788_44235137_44235237_44235982
Isoform_68082_7	chr7	+	2645	2	ISM	ENSMUSG00000062785.15	ENSMUST00000209177.2	2960	6	233	4137	11	1172	5prime_fragment	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAAAAGAAAT	4124	False	NA	NA	False	NA	NA	NA	44240320	44246367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_44241183_44244584
Isoform_68084_4	chr7	+	2695	6	NIC	ENSMUSG00000062785.15	novel	2728	5	NA	NA	26	87	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.42928563989645	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAGCA	4139	False	NA	NA	False	NA	NA	NA	44240335	44251652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44241183_44244584_44245693_44247807_44248000_44248229_44248358_44250292_44250353_44251292
Isoform_68085_4	chr7	+	1751	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	215	3	-8	-3	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGGAGAGTTCAGTG	NA	False	NA	13	True	AATAAA	-13	NA	44398051	44426936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
Isoform_6809_203	chr11	-	4109	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-33	1818	-33	978	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078740	97052357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_68090_850	chr7	+	2433	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	282	7	-13	1	multi-exon	FALSE	canonical	3	986	junction_1	0	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	357	False	NA	14	True	AATAAA	-14	NA	44465793	44480229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_68091_1161	chr7	+	2403	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	312	7	17	1	multi-exon	FALSE	canonical	3	986	junction_1	0	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	387	False	NA	14	True	AATAAA	-14	NA	44465823	44480229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_68092_98	chr7	+	2575	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	140	7	-72	1	multi-exon	FALSE	canonical	3	986	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	215	False	NA	14	True	AATAAA	-14	NA	44465651	44480229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_68093_228	chr7	+	2505	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	210	7	-2	1	multi-exon	FALSE	canonical	3	986	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	285	False	NA	14	True	AATAAA	-14	NA	44465721	44480229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_68094_29	chr7	+	3431	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	312	-1021	17	1021	multi-exon	FALSE	canonical	3	986	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTTGTTCAGGATTGT	387	False	NA	14	True	AATAAA	-16	NA	44465823	44481257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_681_5	chr10	-	1478	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	-5	656	-2	-630	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATTTCATAATGAAGT	NA	False	NA	-2	True	AATAAA	-19	NA	13428888	13400515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
Isoform_6810_26	chr11	-	4174	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-103	1823	-103	973	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTGGCCTTCTGTCC	NA	False	NA	-10	True	GATAAA	-14	NA	97078810	97052362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_68100_32	chr7	+	2713	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	2	7	2	1	multi-exon	FALSE	canonical	3	986	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACTTGCTGTGAGTA	77	False	NA	14	True	AATAAA	-14	NA	44465513	44480229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44465908_44477910
Isoform_68105_7	chr7	+	2074	4	ISM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-5	6	-5	-2	intron_retention	FALSE	canonical	3	159	junction_1	71.5370921659216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTGTTGTGTGTGA	1395	False	NA	13	True	ATTAAA	-18	NA	44498642	44504839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362
Isoform_68106_214	chr7	+	1560	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	26	6	26	-2	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTGTTGTGTGTGA	1426	False	NA	13	True	ATTAAA	-18	NA	44498673	44504839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68107_70	chr7	+	1704	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-115	3	-115	1	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	1285	False	NA	16	True	ATTAAA	-21	NA	44498532	44504842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68108_16	chr7	+	1797	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107885.8	1812	5	26	-11	26	2	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTTGTGTGTGAGTGT	1193	False	NA	17	True	ATTAAA	-22	NA	44498440	44504843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68112_12	chr7	+	1943	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	-104	-679	-56	-2	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTGTTGTGTGTGA	1701	False	NA	13	True	ATTAAA	-18	NA	44498948	44504839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68113_170	chr7	+	1481	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	361	-682	-17	1	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2166	False	NA	16	True	ATTAAA	-21	NA	44499413	44504842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68114_8	chr7	+	1751	5	NIC	ENSMUSG00000011096.18	novel	1757	5	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	123.030484027334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2166	False	NA	16	True	ATTAAA	-21	NA	44499413	44504842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44499701_44501994_44502384_44503203_44503282_44503362_44503533_44504015
Isoform_68117_6	chr7	+	1717	17	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	58.1882384485903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCATCTTGCTGGGG	9319	False	NA	16	True	AATAAA	-18	NA	44506566	44512075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44506677_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68118_32	chr7	+	1771	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	0	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCATCTTGCTGGGG	9315	False	NA	16	True	AATAAA	-18	NA	44506562	44512075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68120_20	chr7	+	1858	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	-16	342	4	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9319	False	NA	15	True	AATAAA	-17	NA	44506566	44512074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68121_23	chr7	+	1952	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	166	66	-15	-66	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTGATGAGCCTGCT	9501	False	NA	24	True	AAGAAA	-17	NA	44506748	44512350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68122_331	chr7	+	1676	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	166	342	-15	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9501	False	NA	15	True	AATAAA	-17	NA	44506748	44512074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68124_6	chr7	+	1568	15	FSM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	-17	-1	-15	0	multi-exon	FALSE	canonical	2	3	junction_5	63.3371686987626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9501	False	NA	15	True	AATAAA	-17	NA	44506748	44512074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
Isoform_68126_50	chr7	+	1684	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	14	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545516	44550048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
Isoform_68129_10	chr7	+	1482	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-9	-20	1	0	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545520	44550048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
Isoform_6813_20	chr11	-	5925	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-33	2	-33	-2	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGCTGCTTCGTTCT	NA	False	NA	-6	True	AATAAA	-23	NA	97078740	97050541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
Isoform_68131_3	chr7	+	2700	8	FSM	ENSMUSG00000011658.17	ENSMUST00000207480.2	2717	8	17	0	4	0	multi-exon	FALSE	canonical	3	96	junction_1	10.3903408834104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545533	44550048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548125_44548199_44548296_44548408_44548811_44549556
Isoform_68132_3	chr7	+	1862	11	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	3.77359245282264	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCTGACAACTATACT	1410	False	NA	NA	False	AATAAA	-19	NA	44592638	44607455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44606977_44607146_44607279
Isoform_68133_5	chr7	+	1843	11	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	-15	1	combination_of_known_junctions	TRUE	canonical	1	2	junction_2	3.84837628097877	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATTCTGACAACTATA	1384	False	NA	NA	False	AATAAA	-17	NA	44592612	44607453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44607020_44607146_44607279
Isoform_68134_3	chr7	+	746	2	FSM	ENSMUSG00000087138.2	ENSMUST00000152595.2	704	2	-43	1	3	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGGCTACAGACTGATT	NA	False	NA	10	True	NA	NA	NA	44636353	44641751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44636795_44641446
Isoform_68135_59	chr7	+	1547	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	26	458	-6	0	multi-exon	FALSE	canonical	3	81	junction_5	29.0601066054199	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647097	44651814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
Isoform_68136_12	chr7	+	1647	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	-17	11	6	0	multi-exon	TRUE	canonical	3	134	junction_1	17.7458915433028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647095	44651814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
Isoform_68137_9	chr7	+	2297	6	NIC	ENSMUSG00000003184.16	novel	1797	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	134	junction_1	18.4499322491981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647095	44651814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44651213_44651587
Isoform_68138_50	chr7	+	965	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	28	2	28	-2	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGATGCTTTTTATTT	NA	False	NA	7	True	AATAAA	-15	NA	44667412	44671069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
Isoform_68140_5	chr7	+	976	9	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	158.639479244607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3122	False	NA	26	True	AATAAA	-17	NA	44711916	44726839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_68142_111	chr7	+	1773	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	37	4	-3	-4	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAATTCTTTGTTGTTT	3122	False	NA	21	True	NA	NA	NA	44711916	44727630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_68143_14	chr7	+	1060	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	-41	795	-14	-1	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3044	False	NA	26	True	AATAAA	-17	NA	44711838	44726839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_68147_9	chr7	+	1690	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	64	-782	-3	-12	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGGCCAAATTCTT	3122	False	NA	13	True	NA	NA	NA	44711916	44727622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
Isoform_68149_6	chr7	+	2387	9	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_4	174.833313473148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGGCGCCTCATTGT	3074	False	NA	28	True	AATAAA	-19	NA	44711868	44726841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724403_44724428_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
Isoform_68150_15	chr7	+	1081	10	NIC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	115.92792567202	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803735	44809489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44803845_44805716_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_68151_246	chr7	+	1053	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	24	0	13	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803750	44809489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_68153_99	chr7	+	1173	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	13	-1	13	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803750	44809489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_68156_6	chr7	+	1452	9	ISM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	1499	-1	-130	0	3prime_fragment	FALSE	canonical	3	336	junction_3	22.7705950734714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44805236	44809489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
Isoform_68161_1081	chr7	+	2077	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	39	24	1	1	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5469	False	NA	NA	False	AATAAA	-14	NA	44865215	44883044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_68165_24	chr7	+	2080	12	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	100.831419739145	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	5508	False	NA	NA	False	AATAAA	-14	NA	44865254	44883044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44865299_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
Isoform_68172_10	chr7	+	1480	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	-34	517	-34	-517	multi-exon	FALSE	canonical	3	16	junction_1	4	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGTATGTACTGTAAT	603	False	NA	NA	False	NA	NA	NA	45063084	45066086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45063213_45064154_45064279_45064858
Isoform_68173_75	chr7	+	3635	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	39	4	6	-4	multi-exon	FALSE	canonical	3	89	junction_1	61.1041369757855	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACTGTGGCTGGACATAA	1066	False	NA	21	True	AATACA	-17	NA	45084306	45106039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_68174_31	chr7	+	3677	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	0	1	0	-1	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGCTGGACATAAGCT	1027	False	NA	24	True	AATACA	-20	NA	45084267	45106042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_68177_28	chr7	+	2222	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	3	15	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGGTGTGGTGGG	NA	False	NA	40	True	AATACA	-36	NA	45097031	45106058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_68178_115	chr7	+	2172	6	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	13058	-15	171	15	3prime_fragment	FALSE	canonical	3	219	junction_3	11.2605506082074	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGGTGTGGTGGG	NA	False	NA	40	True	AATACA	-36	NA	45097325	45106058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_68179_3	chr7	+	2183	6	NIC	ENSMUSG00000003865.17	novel	2681	15	NA	NA	161	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	93.5457107514823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGCTGGACATAAGCT	NA	False	NA	24	True	AATACA	-20	NA	45097315	45106042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_45097453_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
Isoform_68180_4	chr7	+	1319	8	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	1912	1	706	1	3prime_fragment	FALSE	canonical	3	20	junction_3	22.1423963085686	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	1990	False	NA	16	True	AATAAA	-17	NA	45165937	45171805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_68181_3	chr7	+	1334	8	ISM	ENSMUSG00000023467.19	ENSMUST00000107758.10	1597	10	30157	0	713	0	3prime_fragment	FALSE	canonical	3	17	junction_3	22.8339167709362	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	1997	False	NA	17	True	AATAAA	-18	NA	45165944	45171806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_68182_28	chr7	+	805	5	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	4982	1	3776	1	3prime_fragment	FALSE	canonical	3	69	junction_2	4.38748219369606	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	5060	False	NA	16	True	AATAAA	-17	NA	45169007	45171805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_68183_4	chr7	+	692	3	ISM	ENSMUSG00000040428.20	ENSMUST00000211797.2	2655	18	19859	0	17	0	3prime_fragment	FALSE	canonical	3	13	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45199275	45203653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45199390_45202992_45203106_45203188
Isoform_68184_4	chr7	+	542	2	FSM	ENSMUSG00000040428.20	ENSMUST00000211348.2	476	2	0	-66	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45199312	45203653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45199390_45203188
Isoform_68185_40	chr7	+	1372	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	26	2	-18	1	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45204342	45216743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_68188_24	chr7	+	1190	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3187	-6	25	3	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGGTCGTGTCCTCTT	NA	False	NA	13	True	NA	NA	NA	45208654	45216748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_68189_23	chr7	+	1215	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3152	4	-10	-4	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45208619	45216738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
Isoform_68192_614	chr7	+	1572	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	196	4	-1	1	multi-exon	FALSE	canonical	3	349	junction_4	47.8895604490164	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGGCTATCATGCTC	2451	False	NA	NA	False	AATAAA	-14	NA	45219772	45239131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_68194_9	chr7	+	1998	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	-237	11	-237	-6	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAGACATTGGCTAT	2018	False	NA	NA	False	AATAAA	-7	NA	45219339	45239124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
Isoform_68198_9	chr7	+	2399	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	1484	1	1484	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	850	False	NA	5	True	AATAAA	-18	NA	45278395	45288516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_68199_3	chr7	+	2475	10	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	1409	0	1409	0	3prime_fragment	FALSE	canonical	3	17	junction_1	24.3026188702086	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	775	False	NA	6	True	AATAAA	-19	NA	45278320	45288517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
Isoform_68203_9	chr7	+	1403	3	ISM	ENSMUSG00000042918.18	ENSMUST00000210213.2	2486	9	3985	182	-422	-155	3prime_fragment	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTTCTCATGTCTTA	NA	False	NA	NA	False	NA	NA	NA	45293385	45295010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45293853_45293942_45293998_45294129
Isoform_68204_3	chr7	+	1180	7	ISM	ENSMUSG00000003273.15	ENSMUST00000003360.10	1585	9	1141	73	-32	0	3prime_fragment	FALSE	canonical	3	16	junction_2	3.86221007541882	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350407	45354033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45350791_45351857_45352044_45352256_45352353_45352485_45352559_45352882_45353038_45353136_45353303_45353912
Isoform_68205_7	chr7	+	1303	6	NIC	ENSMUSG00000003273.15	novel	1585	9	NA	NA	-15	7	intron_retention	FALSE	canonical	3	16	junction_2	4.16653333119993	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGTGGTTTATCAGTCG	NA	False	NA	10	True	ATTAAA	-21	NA	45350424	45354040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_45350791_45351857_45352044_45352256_45352559_45352882_45353038_45353136_45353303_45353912
Isoform_68206_11	chr7	+	1839	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	-50	48	-50	41	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTTGTGGCGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	45354461	45359579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
Isoform_68210_5	chr7	+	1428	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-231	-41	-50	41	multi-exon	FALSE	canonical	3	23	junction_1	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTTGTGGCGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	45354461	45359579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45355187_45357683_45357896_45359088
Isoform_68211_7	chr7	+	1299	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-234	91	-53	-5	multi-exon	FALSE	canonical	3	23	junction_1	20	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTAGCCTTCCCCCA	NA	False	NA	NA	False	AATACA	-15	NA	45354458	45359447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45355187_45357683_45357896_45359088
Isoform_68213_6574	chr7	+	642	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	33	4	5	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	6574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5955	False	NA	12	True	AATAAA	-19	NA	45367527	45370255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
Isoform_68214_753	chr7	+	672	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	0	7	0	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5922	False	NA	9	True	AATAAA	-16	NA	45367494	45370252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
Isoform_6822_76	chr11	-	4154	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	62	-1	-6	-1	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGGCCTGGTTCTTT	NA	False	NA	-1	True	AATAAA	-14	NA	97171402	97096668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
Isoform_68226_11	chr7	+	2107	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	-561	0	561	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAACAAACAAACAA	3997	False	NA	NA	False	NA	NA	NA	45522248	45533717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
Isoform_68227_128	chr7	+	1540	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	6	0	-3	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	3997	False	NA	11	True	AATAAA	-15	NA	45522248	45533150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
Isoform_68230_170	chr7	+	2158	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	143	-4	0	4	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAGTGTGGCTGCAGGT	5635	False	NA	11	True	AATAAA	-18	NA	45546507	45566841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_68235_216	chr7	+	2097	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	376	-7	54	3	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTAGTGTGGCTGCAGG	6028	False	NA	10	True	AATAAA	-17	NA	45546900	45566840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_68237_5	chr7	+	2194	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	270	2	-49	-2	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTCTGGAGTAGTGT	5922	False	NA	1	True	AATAAA	-8	NA	45546794	45566831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_68239_8	chr7	+	1962	6	ISM	ENSMUSG00000002781.20	ENSMUST00000209292.2	2026	7	396	1	54	-1	3prime_fragment	FALSE	canonical	1	2	junction_3	22.0871003076456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGAGTAGTGTGGCTG	6028	False	NA	6	True	AATAAA	-13	NA	45546900	45566836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45547091_45549055_45549161_45556341_45556537_45558745_45559026_45565506_45565697_45565834
Isoform_68240_6	chr7	+	2001	6	NIC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	43	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.0116638323961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTAGTGTGGCTGCA	6017	False	NA	8	True	AATAAA	-15	NA	45546889	45566838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_45547091_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
Isoform_68241_3	chr7	+	515	2	NNC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	0	864	intron_retention	FALSE	canonical	3	12	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAATTTCAAAATT	3132	False	NA	NA	False	NA	NA	NA	45573638	45575355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_45574014_45575215
Isoform_68243_5	chr7	+	2238	16	ISM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	33	22979	33	3	5prime_fragment	FALSE	canonical	3	214	junction_14	26.7971806145514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAACAAAAAAA	8126	False	NA	NA	False	NA	NA	NA	45683154	45710657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302
Isoform_68244_17	chr7	+	4212	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	40	5	40	-5	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATAGTGTGGGGTG	8133	False	NA	24	True	AATAAA	-24	NA	45683161	45733631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
Isoform_68246_21	chr7	+	2791	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4720	False	NA	4	True	AATAAA	-15	NA	46445540	46473224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_68254_495	chr7	+	2735	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	1	0	1	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4707	False	NA	4	True	AATAAA	-15	NA	46445527	46473224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_68255_11	chr7	+	3022	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-287	1	-287	-1	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4419	False	NA	3	True	AATAAA	-14	NA	46445239	46473223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
Isoform_68264_4147	chr7	+	1584	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	4	0	0	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	4147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495266	46505051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
Isoform_68265_213	chr7	+	1610	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	-22	0	-22	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495240	46505051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
Isoform_68278_23	chr7	+	1807	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	16	8	16	-8	multi-exon	FALSE	canonical	3	21	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCCATTGGCTTCCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	46700364	46704517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_46700550_46702597_46702863_46703160
Isoform_68279_145	chr7	+	2381	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	29	0	0	0	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438779	48477188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
Isoform_68282_33	chr7	+	2361	17	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	63.8620339090449	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACTTAGTTTCTAATG	NA	False	NA	5	True	AATAAA	-16	NA	48438790	48477184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
Isoform_68285_18	chr7	+	1277	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-7	18	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGTTGTTCTAG	9887	False	NA	13	True	AATAAA	-13	NA	49408869	49423741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68286_16	chr7	+	1225	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	4	19	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGTTCTAGT	9884	False	NA	14	True	AATAAA	-14	NA	49408866	49423742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68288_5	chr7	+	1415	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	19	-16	-5	16	multi-exon	TRUE	canonical	3	12	junction_1	99.2685247195706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCCTGTGTGTTGTTCT	9913	False	NA	11	True	AATAAA	-11	NA	49408895	49423739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68289_73	chr7	+	1341	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	22	-25	22	25	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTCTAGTTGCTAA	9940	False	NA	20	True	AATAAA	-20	NA	49408922	49423748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68290_19	chr7	+	997	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	-23	364	1	-364	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTGCTTCTCCT	9895	False	NA	3	True	TATAAA	-17	NA	49408877	49423359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68292_7	chr7	+	1675	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-4	23	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTTCTAGTTGCT	9890	False	NA	18	True	AATAAA	-18	NA	49408872	49423746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
Isoform_68295_18	chr7	+	2431	16	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	15	-13	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	155.061650821715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGCATCACACTGA	NA	False	NA	31	True	AATAAA	-15	NA	49428108	49508000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_68298_834	chr7	+	2479	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	15	13	15	-13	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGCATCACACTGA	NA	False	NA	31	True	AATAAA	-15	NA	49428108	49508000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_68303_11	chr7	+	2263	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	9	-13	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	164.362422460731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGCATCACACTGA	NA	False	NA	31	True	AATAAA	-15	NA	49428102	49508000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
Isoform_68309_3	chr7	+	2162	10	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.956124713487	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTGTCTCTGTATCA	969	False	NA	7	True	ATTAAA	-24	NA	51512126	51644207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_51512193_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_68310_11	chr7	+	2370	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	956	False	NA	1	True	ATTAAA	-18	NA	51512113	51644201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_68312_4	chr7	+	2605	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	26	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTGTCTCTGTATCA	631	False	NA	7	True	ATTAAA	-24	NA	51511788	51644207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
Isoform_68314_3	chr7	+	2258	13	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	30	11469	4	-2146	5prime_fragment	FALSE	canonical	3	83	junction_7	5.69356361751291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAACAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	55443942	55465378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607
Isoform_68315_4	chr7	+	2335	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	24	10069	-2	-746	5prime_fragment	FALSE	canonical	3	83	junction_7	5.82384407099929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCGTGTATAGCACTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	55443936	55466778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
Isoform_68316_15	chr7	+	2588	18	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	9	4967	6	3092	5prime_fragment	FALSE	canonical	3	67	junction_15	9.6774986044305	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTCCTGGAAAGTTTT	NA	False	NA	3	True	AATAAA	-14	NA	55443921	55471880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725
Isoform_68318_24	chr7	+	3671	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	4	230	4	1	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTACCTATTTCATGT	NA	False	NA	16	True	AATAAA	-19	NA	55443905	55481195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
Isoform_68326_6	chr7	+	4089	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	78	28	29	-1	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATAAAAAAACA	NA	False	NA	-23	True	NA	NA	NA	55492031	55580218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_68327_96	chr7	+	4149	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	161	2130	-18	1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAACAAA	NA	False	NA	-21	True	NA	NA	NA	55491979	55580220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_68328_104	chr7	+	4097	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	213	2130	29	1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAACAAA	NA	False	NA	-21	True	NA	NA	NA	55492031	55580220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_68329_7	chr7	+	4329	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	-19	2130	-19	1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAACAAA	NA	False	NA	-21	True	NA	NA	NA	55491799	55580220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_6833_4	chr11	-	2355	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-7	-1	-7	1	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGGTTCTTTGGGAC	NA	False	NA	-2	True	AATAAA	-18	NA	97590481	97579647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_68330_13	chr7	+	4266	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	44	2130	43	1	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAACAAA	NA	False	NA	-21	True	NA	NA	NA	55491862	55580220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_68331_15	chr7	+	4366	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	172	1902	-7	202	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55491990	55580448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_68332_16	chr7	+	4325	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	213	1902	29	202	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55492031	55580448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
Isoform_6834_5	chr11	-	2324	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	22	1	15	-1	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGGTTCTTTGGG	NA	False	NA	-4	True	AATAAA	-16	NA	97590452	97579649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
Isoform_68340_10	chr7	+	3086	20	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-115	117073	-58	3	5prime_fragment	TRUE	canonical	2	7	junction_17	4.35094793377692	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAAAGAAATTGATG	NA	False	NA	NA	False	AAAAAG	-8	NA	55699885	55764475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449
Isoform_68341_5	chr7	+	849	5	ISM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	9	39654	-2	23367	5prime_fragment	FALSE	canonical	3	32	junction_3	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCCAATGTTACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	57240918	57438896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613
Isoform_68344_32	chr7	+	3246	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	3	6607	3	-3	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878552	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68345_11	chr7	+	3339	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-90	6607	-38	-3	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878459	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68347_27	chr7	+	3173	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878558	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68348_13	chr7	+	3228	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878503	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68353_62	chr7	+	3053	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	60	1798	9	-3	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878558	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68354_27	chr7	+	3116	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-3	1798	-2	-3	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	58878495	58954677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
Isoform_68357_20	chr7	+	1994	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	14	8	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTCAGACTATGTTTC	NA	False	NA	34	True	ATTAAA	-31	NA	63835220	63861183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_68358_6	chr7	+	2065	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	15	2	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGAGTTTTCAGACTA	NA	False	NA	28	True	ATTAAA	-25	NA	63835143	63861177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_68365_177	chr7	+	1919	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	72	1	-6	-1	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACTGAGTTTTCAGA	NA	False	NA	25	True	ATTAAA	-22	NA	63835200	63861174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
Isoform_68368_10	chr7	+	2677	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-102	0	-6	0	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTCTTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	63835200	63868483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
Isoform_6837_48	chr11	-	3548	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	0	1505	0	-1505	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTTTTCTTTCTCTTT	NA	False	NA	-1	True	TTTAAA	-21	NA	97635530	97607487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
Isoform_68371_8	chr7	+	2906	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	-47	69	31	3	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGATGAATTGGCT	NA	False	NA	16	True	AATAAA	-21	NA	63835159	63874515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
Isoform_68372_10	chr7	+	2848	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	9	71	9	1	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCTTAGATGAATTGG	NA	False	NA	14	True	AATAAA	-19	NA	63835215	63874513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
Isoform_68376_5	chr7	+	2531	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	25	2649	25	128	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGCCTTCAGTTATT	752	False	NA	NA	False	AAGAAA	-29	NA	63937442	63987905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_68377_4	chr7	+	4780	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	26	399	26	-399	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	753	False	NA	9	True	AATAAA	-19	NA	63937443	63990155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_68378_3	chr7	+	4996	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-191	400	-174	-400	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTCGTCACCAGTATG	536	False	NA	8	True	AATAAA	-18	NA	63937226	63990154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
Isoform_68379_17	chr7	+	560	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	-31	3	4	-3	multi-exon	FALSE	canonical	3	108	junction_2	103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATGTATTTGTTATT	NA	False	NA	18	True	ATTAAA	-19	NA	64042491	64061866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_64042592_64049916_64050093_64061582
Isoform_68380_86	chr7	+	725	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	99	4	4	0	multi-exon	FALSE	canonical	3	203	junction_2	55.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042491	64061869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_64042592_64049916_64050255_64061582
Isoform_68381_10	chr7	+	382	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	0	9	0	-9	multi-exon	FALSE	canonical	3	49	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATACATTCATGTATTT	NA	False	NA	12	True	ATTAAA	-13	NA	64042487	64061860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_64042592_64061582
Isoform_68383_5	chr7	+	2846	14	NIC	ENSMUSG00000030519.15	novel	3321	15	NA	NA	-69	4	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	1.27794213275663	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	64151384	64403118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_64151567_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
Isoform_68385_4	chr7	+	2810	14	NIC	ENSMUSG00000030519.15	novel	3027	12	NA	NA	-30	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.27794213275663	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	64151855	64403118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_64152002_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
Isoform_68386_3	chr7	+	1835	11	ISM	ENSMUSG00000030515.10	ENSMUST00000126941.2	2709	13	0	7347	0	-7347	5prime_fragment	FALSE	canonical	3	56	junction_9	8.96437393240599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATACTATTGGATGATTA	NA	False	NA	NA	False	AATATA	-25	NA	65294645	65326215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711
Isoform_68388_42	chr7	+	3179	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	3	10	3	-10	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGAGCCTCGGTAT	NA	False	NA	1	True	AATAAA	-14	NA	65294648	65341829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
Isoform_6839_5	chr11	-	5070	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	-17	0	-17	0	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATGTGAGTCCTTTG	NA	False	NA	-5	True	AATAAA	-22	NA	97635547	97605982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
Isoform_68390_11	chr7	+	953	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	42	8	-8	3	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACAACCCAGAACTTTTTA	NA	False	NA	20	True	AATAAA	-20	NA	65343206	65351653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_68391_186	chr7	+	856	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	51	1	-8	1	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACGACAACCCAGAACTT	NA	False	NA	16	True	AATAAA	-16	NA	65343206	65351649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_68392_9	chr7	+	838	5	NIC	ENSMUSG00000078681.11	novel	905	6	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	208.078711068672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGAACTTTTTATTTGC	NA	False	NA	25	True	AATAAA	-25	NA	65343206	65351658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_65343318_65344917_65345076_65347443_65347619_65348839_65348916_65351340
Isoform_68395_9	chr7	+	4190	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	170	45	63	1	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCTTGTATTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	65511946	65700089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
Isoform_6840_32	chr11	-	3105	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	1	-1	1	1	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTAGAGCGATCTACC	7436	False	NA	-20	True	AATAAA	-20	NA	97657381	97636439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_68400_1108	chr7	+	1037	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	203	8	-3	-1	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGACTGTGTGCTGTG	NA	False	NA	15	True	AATAAA	-15	NA	65710288	65724327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
Isoform_68402_30	chr7	+	945	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	12	-2	-8	2	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGACTGTGTGCTGTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	65710303	65724330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
Isoform_68407_3	chr7	+	2665	5	FSM	ENSMUSG00000075701.11	ENSMUST00000205965.2	702	5	-9	-1954	-9	0	multi-exon	FALSE	canonical	3	415	junction_3	16.7089048115069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACAGTCTCTGGTTTTTC	NA	False	NA	5	True	AGTAAA	-14	NA	65729415	65739151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940
Isoform_68408_3	chr7	+	1168	6	FSM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	-10	-1	-9	1	multi-exon	FALSE	canonical	3	53	junction_5	154.225808475754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGTCTCTGGTTTTTCT	NA	False	NA	6	True	AGTAAA	-15	NA	65729415	65739152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737017_65738514
Isoform_68409_88	chr7	+	1173	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	18	0	-10	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729414	65739153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
Isoform_6841_6	chr11	-	3234	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	-129	0	-5	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGATTTCTTGGAGCAA	7435	False	NA	-6	True	AATAAA	-15	NA	97657382	97636311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
Isoform_68413_10	chr7	+	2648	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	-1	0	1	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGCGTGTCTGGGTCTT	NA	False	NA	12	True	AATAAA	-18	NA	66339705	66364493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
Isoform_68414_12	chr7	+	2574	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	3	2511	3	1	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGCGTGTCTGGGTCTT	NA	False	NA	12	True	AATAAA	-18	NA	66339708	66364493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
Isoform_68415_24	chr7	+	2910	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	-9	-3	3	3	multi-exon	FALSE	canonical	3	45	junction_1	19.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGATTCTCCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	66872346	66878207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_66872378_66873356_66873640_66875611
Isoform_68416_12	chr7	+	3297	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	7	-1194	-6	-2	multi-exon	FALSE	canonical	3	29	junction_1	27.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGATTCTCCCTCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	66872370	66878209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_66872787_66873356_66873640_66875611
Isoform_68418_48	chr7	+	2207	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	8	1	8	-1	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTTTGTGTGTTTGAA	NA	False	NA	12	True	AATAAA	-17	NA	67297180	67376323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_68420_3	chr7	+	2008	10	FSM	ENSMUSG00000030555.17	ENSMUST00000126093.8	1991	10	-17	0	8	0	multi-exon	TRUE	canonical	1	3	junction_1	24.6671671620895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297180	67376324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67297594_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_68421_3	chr7	+	1936	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107470.2	1915	11	-14	-7	-14	4	multi-exon	FALSE	canonical	1	2	junction_1	23.6822718504792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGTGTTTGAAATGAA	NA	False	NA	17	True	AATAAA	-22	NA	67305180	67376328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67305318_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
Isoform_68422_8	chr7	+	5624	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-946	6731	-946	769	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGGAAAGAA	NA	False	NA	NA	False	GGGGCT	-45	NA	67601628	67876685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
Isoform_68425_3	chr7	+	2105	3	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-956	-111470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACATAAAGGAGAAAAGTC	NA	False	NA	NA	False	AATAAA	-21	NA	67601618	67726247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_67602701_67653557_67654104_67725770
Isoform_68426_127	chr7	+	2837	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-43	21	-43	-16	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGTTAATAGCTTAATT	NA	False	NA	37	True	AATAAA	-8	NA	67925699	68012819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_68428_18	chr7	+	2647	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-40	-25	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTTCCACATGTTAAT	NA	False	NA	28	True	NA	NA	NA	67925702	68012810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_68429_5	chr7	+	2736	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-30	-18	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACATGTTAATAGCTTAA	NA	False	NA	35	True	AATAAA	-6	NA	67925712	68012817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_68430_11	chr7	+	2560	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-42	-28	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGACCTTCCACATGTT	NA	False	NA	25	True	NA	NA	NA	67925700	68012807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_68431_15	chr7	+	2685	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-1	-26	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	43.556203428936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCTTCCACATGTTAA	NA	False	NA	27	True	NA	NA	NA	67925741	68012809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
Isoform_68433_11	chr7	+	3645	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-59	0	-48	0	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73025208	73069647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
Isoform_68436_11	chr7	+	1800	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	15	1556	15	-1556	multi-exon	FALSE	canonical	3	22	junction_1	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTTTTGTGACAGT	NA	False	NA	NA	False	NA	NA	NA	73040989	73068091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_73041245_73058979_73059498_73067064
Isoform_68437_8	chr7	+	3363	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	8	0	8	0	multi-exon	FALSE	canonical	3	22	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73040982	73069647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_73041245_73058979_73059498_73067064
Isoform_68439_33	chr7	+	2679	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	-19	23	-19	-23	multi-exon	FALSE	canonical	3	29	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAACAAAAAATAACCT	NA	False	NA	NA	False	AATAAA	-9	NA	73390030	73426644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_73390577_73416234_73416367_73424643
Isoform_68440_39	chr7	+	2592	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	68	23	68	-23	multi-exon	FALSE	canonical	3	29	junction_2	1.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAACAAAAAATAACCT	NA	False	NA	NA	False	AATAAA	-9	NA	73390117	73426644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_73390577_73416234_73416367_73424643
Isoform_68441_4	chr7	+	5220	15	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	3.75322990154847	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAGAATTTTGAAGA	NA	False	NA	NA	False	AAGAAA	-27	NA	75105306	75347089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049
Isoform_68442_4	chr7	+	2309	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	26	6624	-2	16	5prime_fragment	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGACTTATCGGGTG	NA	False	NA	NA	False	AATAAA	-34	NA	75498083	75517255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_75498222_75515084
Isoform_68443_4	chr7	+	2240	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	92	6627	5	13	5prime_fragment	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAAGTGACTTATCGG	NA	False	NA	NA	False	AATAAA	-31	NA	75498149	75517252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_75498222_75515084
Isoform_68444_86	chr7	+	3360	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	48	-5	-6	5	multi-exon	FALSE	canonical	3	36	junction_1	5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTCTGATTCTGCCA	NA	False	NA	22	True	AATAAA	-23	NA	75498105	75523884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_75498222_75515084_75516890_75522445
Isoform_68445_5	chr7	+	2270	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	28	1	5	-1	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGCTGAAGGAGAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	75498116	75517238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_75498233_75515084
Isoform_68446_26	chr7	+	3353	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	34	-2	8	1	multi-exon	FALSE	canonical	3	14	junction_1	16	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGGGTTCTGATTCT	NA	False	NA	18	True	AATAAA	-19	NA	75498119	75523880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_75498233_75515084_75516890_75522445
Isoform_68448_4	chr7	+	2628	4	FSM	ENSMUSG00000030611.11	ENSMUST00000136001.8	548	4	-15	-2065	0	-1	multi-exon	FALSE	canonical	3	364	junction_2	42.7083130081252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433102	78442736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384
Isoform_68449_80	chr7	+	833	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	223	0	-13	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433089	78442737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
Isoform_68450_8	chr7	+	826	6	FSM	ENSMUSG00000030611.11	ENSMUST00000133553.8	825	6	-1	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	143.488814895099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433102	78442737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78440515_78441621_78441688_78442389
Isoform_68453_120	chr7	+	2108	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	21	2827	-3	1	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545695	78558130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
Isoform_68456_323	chr7	+	1995	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	13	-1	-4	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545694	78558130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
Isoform_68458_14	chr7	+	2068	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	-60	-1	20	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545621	78558130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
Isoform_68460_16	chr7	+	2241	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	-10	-1	-10	1	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAACTGGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	78545746	78558127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
Isoform_68463_169	chr7	+	2046	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6216	-4	-136	1	3prime_fragment	FALSE	canonical	3	660	junction_1	4	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78551972	78558130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_78552579_78555590_78555792_78556891
Isoform_68466_3	chr7	+	2027	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	22	4828	22	-4828	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGAGTTTTCCTTCTC	2744	False	NA	NA	False	NA	NA	NA	78922968	79010428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
Isoform_68467_171	chr7	+	4631	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	15	-1	15	1	multi-exon	FALSE	canonical	3	260	junction_14	37.7798783892034	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79042074	79100013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
Isoform_68469_8	chr7	+	4634	38	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	8	0	combination_of_known_splicesites	TRUE	canonical	3	30	junction_31	65.5515454678326	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042067	79100012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
Isoform_68473_6	chr7	+	2005	4	FSM	ENSMUSG00000097023.9	ENSMUST00000182317.2	479	4	-195	-1331	8	-1	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTCTTGTTTGTATA	NA	False	NA	NA	False	AATAAA	-15	NA	79164987	79182338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79165421_79173664_79173725_79177510_79177618_79180933
Isoform_68474_41	chr7	+	2105	6	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-19	18213	-3	7	5prime_fragment	FALSE	canonical	3	244	junction_2	18.3847763108502	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGGCAAATTTCCAT	1956	False	NA	NA	False	AATAAA	-24	NA	79309975	79325468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019
Isoform_68475_22	chr7	+	2027	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	9	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGGCAAATTTCCAT	1933	False	NA	NA	False	AATAAA	-24	NA	79309952	79325468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
Isoform_68476_4	chr7	+	6177	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	29	993	3	-979	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATGGTCATCTGAAGAT	1953	False	NA	5	True	ATTAAA	-16	NA	79309972	79346903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
Isoform_68477_3	chr7	+	3554	3	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	33690	4	22965	-4	3prime_fragment	FALSE	canonical	3	279	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTATTACTTTCCC	NA	False	NA	12	True	ATTAAA	-22	NA	79343633	79347892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79345571_79345682_79345809_79346401
Isoform_68478_3	chr7	+	870	5	NIC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	29137	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	NA	False	NA	1	True	AATAAA	-16	NA	79422047	79435698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79422269_79425259_79425324_79426377_79426535_79426860_79427054_79435463
Isoform_68479_5	chr7	+	1418	2	FSM	ENSMUSG00000030543.11	ENSMUST00000107394.3	1944	2	523	3	523	-3	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTTTGCTTCTGATT	NA	False	NA	NA	False	ATTAAA	-18	NA	79460997	79463184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79461508_79462276
Isoform_68481_100	chr7	+	2285	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-30	4979	-10	5	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79674551	79736599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
Isoform_68482_222	chr7	+	2256	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-1	4979	-1	5	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79674580	79736599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
Isoform_68483_8	chr7	+	4522	6	FSM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-1	-915	-1	-4	multi-exon	FALSE	canonical	2	5	junction_5	149.360503480673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGTGACTGTACGTGCT	NA	False	NA	14	True	AATAAA	-14	NA	79674580	79742493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
Isoform_68484_35	chr7	+	4458	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	-11	1424	-11	0	multi-exon	TRUE	canonical	3	72	junction_4	112.192635676322	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79674550	79742497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_68485_82	chr7	+	4426	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	19	1426	-1	-2	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGACTGTACGTGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	79674580	79742495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_68488_36	chr7	+	2228	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-31	-3	-31	3	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACGTTGAGTGCTGTGTA	NA	False	NA	4	True	AATAAA	-12	NA	79676103	79736597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
Isoform_68489_12	chr7	+	2402	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-201	-7	149	7	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGAGTGCTGTGTAACTC	NA	False	NA	8	True	AATAAA	-16	NA	79675933	79736601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
Isoform_68492_28	chr7	+	4405	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	316	0	-34	0	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79676100	79742497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_68493_10	chr7	+	4572	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	148	1	148	-1	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGACTGTACGTGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	79675932	79742496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
Isoform_68497_4	chr7	+	2457	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	3	1729	3	-1729	multi-exon	FALSE	canonical	3	81	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTCTTATGTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	79882615	79890080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79882954_79887961
Isoform_685_18	chr10	-	1546	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	6	2	2	-2	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGTCTGCACTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	13744718	13522799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_68501_6	chr7	+	2657	3	ISM	ENSMUSG00000045467.14	ENSMUST00000205270.2	2723	14	9344	-149	9344	-2	intron_retention	FALSE	canonical	2	15	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCGTGCTGTACCTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	79906479	79910567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79906779_79907924_79908106_79908390
Isoform_68503_217	chr7	+	1313	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	5	-1	0	1	multi-exon	FALSE	canonical	3	448	junction_2	14	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	14	True	AATAAA	-14	NA	79910967	79915123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79911172_79911568_79911680_79914125
Isoform_68504_18	chr7	+	1710	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	0	-1	0	1	multi-exon	FALSE	canonical	3	448	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	False	NA	14	True	AATAAA	-14	NA	79910967	79915123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79911680_79914125
Isoform_68505_10	chr7	+	2564	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	6	4	6	2	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919402	79941323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
Isoform_68506_10	chr7	+	2521	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	49	4	19	2	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919445	79941323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
Isoform_68514_26	chr7	+	2954	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACACTGTTTTGTCT	NA	False	NA	11	True	AATAAA	-21	NA	79944227	79966000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
Isoform_68516_133	chr7	+	2912	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	1	-1	1	1	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACACTGTTTTGTCT	NA	False	NA	11	True	AATAAA	-21	NA	79944227	79966000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
Isoform_68519_131	chr7	+	3030	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-24	2	2	1	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACACTGTTTTGTCT	NA	False	NA	11	True	AATAAA	-21	NA	79944228	79966000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
Isoform_68522_58	chr7	+	2996	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	30	0	1	0	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944227	79966007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
Isoform_68525_46	chr7	+	871	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	25	614	-3	-2	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTTCTTCCTTCTC	NA	False	NA	15	True	AATAAA	-20	NA	79992876	79995848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
Isoform_68526_3	chr7	+	1004	4	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	46.7784375778224	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTGCTGTTCTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	79992887	79995845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_79992998_79993286_79993343_79993463_79993705_79995248
Isoform_68527_6	chr7	+	2253	3	FSM	ENSMUSG00000038797.14	ENSMUST00000147125.2	1582	3	-22	-649	11	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATACCCTGTTTGTCGT	2899	False	NA	NA	False	TTTAAA	-42	NA	80510678	80526285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_80510826_80512915_80513420_80524683
Isoform_68528_5	chr7	+	4089	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-11	3219	-11	492	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGTGGCCACTGTG	NA	False	NA	3	True	AATAAA	-14	NA	80643417	80691693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
Isoform_68530_4	chr7	+	2659	8	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	37238	1	7	-1	3prime_fragment	FALSE	canonical	3	12	junction_3	5.00611870512435	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	False	NA	21	True	AATAAA	-33	NA	80744585	80755359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
Isoform_68531_236	chr7	+	1981	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27008	0	27008	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791605	80820164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_68533_26	chr7	+	2027	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	26962	0	26962	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	9971	False	NA	11	True	AATAAA	-20	NA	80791559	80820164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_68535_14	chr7	+	1855	8	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27008	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.0490481340493	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791605	80820164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_80791793_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
Isoform_68537_21	chr7	+	3791	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	10	1	10	-1	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTGTTGCCATTTCT	1117	False	NA	6	True	ATTAAA	-17	NA	80863353	80984280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
Isoform_68539_7	chr7	+	4090	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-289	1	-289	-1	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTGTTGCCATTTCT	818	False	NA	6	True	ATTAAA	-17	NA	80863054	80984280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
Isoform_68542_13	chr7	+	732	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	-8	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATTTTTTGGGTA	NA	False	NA	3	True	AATAAA	-8	NA	81173310	81181241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
Isoform_68543_3	chr7	+	777	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	41.2148840428633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATCAAAATTTTTTGGG	NA	False	NA	1	True	AATAAA	-6	NA	81173310	81181239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_81173472_81178534_81178689_81179094_81179276_81180958
Isoform_68545_61	chr7	+	2718	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-7	358	-7	1	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	6977	False	NA	-62	True	AATAAA	-15	NA	81221032	81246226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_68546_19	chr7	+	2797	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-19	291	7	68	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTATTATGAGGAAAT	6965	False	NA	5	True	ACTAAA	-15	NA	81221020	81246293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_68547_11	chr7	+	3114	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-44	-1	-18	1	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTTCCAGAGGCCT	6940	False	NA	NA	False	ATTAAA	-16	NA	81220995	81246585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
Isoform_68548_8	chr7	+	2732	10	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-7	1	intron_retention	FALSE	canonical	2	4	junction_8	20.6726395192137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	6977	False	NA	-62	True	AATAAA	-15	NA	81221032	81246226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243385_81243869_81245634
Isoform_6855_3134	chr11	-	497	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	54	508	-1	3	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	3134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTCTTCTTGACACC	NA	False	NA	-32	True	ATTAAA	-14	NA	97673209	97668860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_68550_89	chr7	+	1373	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	79	0	-46	0	multi-exon	FALSE	canonical	3	441	junction_1	195	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	AATAAA	-30	NA	81412751	81419239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81412805_81417274_81417472_81418116
Isoform_68551_54	chr7	+	1338	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	48	66	48	-55	multi-exon	FALSE	canonical	3	441	junction_1	195	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGTGTACCAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	81412720	81419173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81412805_81417274_81417472_81418116
Isoform_68554_3	chr7	+	1735	9	NIC	ENSMUSG00000038623.10	novel	2226	10	NA	NA	243	6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTTTGAAGCATTTT	NA	False	NA	NA	False	AATAAA	-31	NA	81509141	81533825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_81509289_81512897_81513002_81514994_81515093_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
Isoform_68556_51	chr7	+	1592	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	50	5	4	-5	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	NA	False	NA	12	True	AATAAA	-19	NA	81824593	81956622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_68557_8	chr7	+	1581	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	-104	9	4	-9	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	False	NA	8	True	AATAAA	-15	NA	81824593	81956618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_68558_5	chr7	+	1537	8	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-20	-11	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	114.240884064492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCATAAAAGACTGGTTA	NA	False	NA	6	True	AATAAA	-13	NA	81824569	81956616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_81824768_81909339_81909409_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_68559_3	chr7	+	2064	15	FSM	ENSMUSG00000038563.15	ENSMUST00000125245.8	2453	15	-22	411	-7	-411	multi-exon	FALSE	canonical	3	42	junction_1	27.9482028190781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	AGTAAA	-45	NA	82297814	82347481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
Isoform_68561_4	chr7	+	3608	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	-18	18	-18	-18	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAACATAACTTCCAA	NA	False	NA	20	True	AATAAA	-25	NA	82297803	82427042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
Isoform_68562_4	chr7	+	1049	5	NNC	ENSMUSG00000038563.15	novel	755	7	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	64.6935081750866	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGAGTGGCCTGTGGCT	NA	False	NA	NA	False	AATAAA	-13	NA	82297824	82308231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82307474
Isoform_68564_3	chr7	+	2075	15	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-18	79581	-6	-413	5prime_fragment	FALSE	canonical	3	73	junction_1	23.371555186524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AGTAAA	-43	NA	82297830	82347479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
Isoform_68566_37	chr7	+	3614	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-12	8	0	-8	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCAAACCGTTTGTT	NA	False	NA	30	True	AATAAA	-35	NA	82297836	82427052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
Isoform_68569_6	chr7	+	3401	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	5	-51	5	51	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTGTTGTATGGT	NA	False	NA	NA	False	AATAAA	-10	NA	82516545	82520774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_82517136_82517963
Isoform_6857_48	chr11	-	1006	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	54	-1	-1	1	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGTGCTTGAGAA	NA	False	NA	-8	True	AATAAA	-18	NA	97673209	97668351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_68570_4	chr7	+	1092	9	ISM	ENSMUSG00000038540.15	ENSMUST00000163297.8	3621	19	-16	17202	-16	2005	5prime_fragment	FALSE	canonical	2	4	junction_6	2.08791163606126	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAGAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	83234118	83250113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093
Isoform_68571_53	chr7	+	2437	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	41	5	0	-5	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTATCTTGAGTTCCTC	NA	False	NA	NA	False	ATTAAA	-18	NA	83281207	83291531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
Isoform_68574_3	chr7	+	2931	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	41	-489	0	489	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTTGTTTGTTTGTT	NA	False	NA	NA	False	AATATA	-28	NA	83281207	83292025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
Isoform_68575_550	chr7	+	1864	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	274	2354	-56	1098	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGATAGGTATATTCTG	NA	False	NA	22	True	AATAAA	-17	NA	83541481	83548386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_68577_37	chr7	+	1894	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	247	2351	-83	1101	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGGTATATTCTGTCC	NA	False	NA	25	True	AATAAA	-20	NA	83541454	83548389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_68578_23	chr7	+	2091	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	50	2351	48	1101	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGGTATATTCTGTCC	NA	False	NA	25	True	AATAAA	-20	NA	83541257	83548389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_68581_25	chr7	+	1990	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	146	2356	144	1096	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541353	83548384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_83541684_83544737_83544971_83546957
Isoform_6859_53	chr11	-	584	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	-33	508	-33	3	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTCTTCTTGACACC	NA	False	NA	-32	True	ATTAAA	-14	NA	97673296	97668860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
Isoform_68590_192	chr7	+	1867	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	50	576	1	-576	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTCTTTCTATGTGTG	NA	False	NA	13	True	AATAAA	-18	NA	87927342	87959520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
Isoform_68591_14	chr7	+	1428	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	36	113	36	-113	multi-exon	FALSE	canonical	3	30	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTCTGATATTACC	NA	False	NA	5	True	AATAAA	-18	NA	88079516	88140667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_88079812_88099688_88099970_88139815
Isoform_68592_11	chr7	+	2967	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	20	3733	20	-3733	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAGTATACTCAATTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	89053582	89058609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_89054180_89056239
Isoform_68594_8	chr7	+	3436	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	48	5	-3	1	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTTACGGTGTTCTG	NA	False	NA	14	True	AATAAA	-15	NA	89779468	89858135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_68595_4	chr7	+	3972	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	33	-516	16	345	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTTTTAAATTAAG	NA	False	NA	10	True	ATTAAA	-21	NA	89779453	89858656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
Isoform_68596_7	chr7	+	2674	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-856	-927	84	641	multi-exon	FALSE	canonical	3	58	junction_1	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTCTTACTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	90092020	90095953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_90093296_90093507_90093586_90094632
Isoform_68597_7	chr7	+	1942	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1072	3	86	-3	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTAGTGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	90092022	90096926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
Isoform_68599_7	chr7	+	2920	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-904	-636	45	636	multi-exon	FALSE	canonical	3	101	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAACTGTTGTCTTAC	NA	False	NA	NA	False	ATTAAA	-14	NA	90091981	90095948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_90093586_90094632
Isoform_68600_7	chr7	+	2152	3	FSM	ENSMUSG00000051451.7	ENSMUST00000209102.2	789	3	-1368	5	86	-5	multi-exon	FALSE	canonical	3	27	junction_2	37	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGATTAGTGTCTTAAA	NA	False	NA	NA	False	AATAAA	-10	NA	90092022	90096924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_90093586_90094632_90094702_90096404
Isoform_68602_28	chr7	+	1250	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	346	0	346	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210702	92231502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
Isoform_68604_6	chr7	+	1570	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	26	0	26	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210382	92231502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
Isoform_68606_7	chr7	+	1348	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	39	209	39	-209	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAAGTTGGATTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	92210395	92231293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
Isoform_68607_4	chr7	+	1511	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	50	7895	-14	-4	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCATGAGTCAGCAGT	NA	False	NA	NA	False	AATAAA	-13	NA	92390860	92485848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
Isoform_68609_101	chr7	+	2348	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	45	574	2	-5	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATTTATTGAAAAAGTA	NA	False	NA	97	True	AATAAA	-19	NA	92524504	92583217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
Isoform_68610_4	chr7	+	3086	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	-693	574	89	-5	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATTTATTGAAAAAGTA	NA	False	NA	97	True	AATAAA	-19	NA	92523766	92583217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
Isoform_68613_5	chr7	+	2533	3	FSM	ENSMUSG00000048078.17	ENSMUST00000129445.8	2527	3	-6	0	-6	0	multi-exon	FALSE	canonical	2	13	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95859346	96088173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_95859617_96004562_96004619_96085966
Isoform_68614_5	chr7	+	2238	14	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-13	522	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.7429024987159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAGAAGTTATTTTTA	7329	False	NA	8	True	ATTAAA	-20	NA	96600698	96712701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_96600863_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_68617_4	chr7	+	3002	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	22	754	6	-754	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTTTCAAAGTTTC	7364	False	NA	NA	False	TATAAA	-16	NA	96600733	96713211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
Isoform_68619_4	chr7	+	2954	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	-5	17	-5	-17	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGATAAATGACAATTA	NA	False	NA	NA	False	NA	NA	NA	96981528	96999403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_96981579_96996499
Isoform_68620_24	chr7	+	1993	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	18	28	18	-28	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCAAAGTGTTTTGGGT	NA	False	NA	35	True	TATAAA	-24	NA	97020830	97041364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_68622_3	chr7	+	1959	13	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	15	-31	combination_of_known_junctions	TRUE	canonical	3	13	junction_9	36.0380778560061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGCAAAGTGTTTTG	NA	False	NA	32	True	TATAAA	-21	NA	97020827	97041361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
Isoform_68624_626	chr7	+	600	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	76	7	-24	-7	multi-exon	FALSE	canonical	3	2164	junction_2	233	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATCTGTTCCTTTCCTG	NA	False	NA	14	True	ATTAAA	-13	NA	97049285	97057002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97049565_97056072_97056217_97056825
Isoform_68626_85	chr7	+	603	3	NNC	ENSMUSG00000030647.9	novel	683	3	NA	NA	-29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1315	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATCTGTTCCTTTCCTG	NA	False	NA	14	True	ATTAAA	-13	NA	97049280	97057002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_97049565_97056072_97056217_97056827
Isoform_68627_389	chr7	+	3197	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	47	-4	0	3	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	980	False	NA	29	True	AATAAA	-17	NA	97130209	97190605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_68628_13	chr7	+	3243	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	0	-3	0	2	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	933	False	NA	28	True	AATAAA	-16	NA	97130162	97190604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_68629_17	chr7	+	3053	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	28	junction_20	102.131723224906	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	980	False	NA	29	True	AATAAA	-17	NA	97130209	97190605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97187106_97187228_97190218
Isoform_68630_50	chr7	+	3194	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	91.9439732384675	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	980	False	NA	29	True	AATAAA	-17	NA	97130209	97190605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
Isoform_68632_42	chr7	+	756	5	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	-1	33213	-1	-7707	5prime_fragment	FALSE	canonical	3	100	junction_2	11.247221879202	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGTGTGTTTTCT	NA	False	NA	NA	False	AAGAAA	-23	NA	97229102	97302414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259
Isoform_68633_8	chr7	+	1056	5	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	-301	33213	-293	-7707	5prime_fragment	FALSE	canonical	3	100	junction_2	11.247221879202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGTGTGTTTTCT	NA	False	NA	NA	False	AAGAAA	-23	NA	97228802	97302414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259
Isoform_68636_10	chr7	+	3009	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-12	16597	-4	1	5prime_fragment	FALSE	canonical	3	100	junction_2	12.6491106406735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAAAAGATGCAA	NA	False	NA	12	True	TTTAAA	-28	NA	97229091	97325388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362
Isoform_68637_913	chr7	+	1478	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	28	-2	28	2	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGTGATTTTGCTCTTG	NA	False	NA	13	True	AATAAA	-19	NA	97345868	97368088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_68638_10	chr7	+	1547	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	-47	4	-47	-4	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATCGCTGTGATTTTG	NA	False	NA	7	True	AATAAA	-13	NA	97345793	97368082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_68640_22	chr7	+	1517	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	42	-55	-19	55	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTACATGTATGTG	NA	False	NA	66	True	AGTAAA	-28	NA	97345882	97368141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
Isoform_68643_25	chr7	+	3280	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	2	-488	2	-10	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTACAGGAAGTGT	NA	False	NA	9	True	AATAAA	-10	NA	97437749	97561578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68644_30	chr7	+	2202	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-34	626	-34	-25	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTTCTCCTTTCCTT	NA	False	NA	20	True	AATAAA	-29	NA	97437713	97560464	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68645_16	chr7	+	3310	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-28	-488	-28	-10	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTACAGGAAGTGT	NA	False	NA	9	True	AATAAA	-10	NA	97437719	97561578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68646_37	chr7	+	2148	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	2	644	2	-43	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCCGACCCCTCATG	NA	False	NA	2	True	AATAAA	-11	NA	97437749	97560446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68648_10	chr7	+	2425	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-50	419	-50	182	multi-exon	TRUE	canonical	3	118	junction_1	35.6279671159656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAATCTCAGCCATCCC	NA	False	NA	3	True	AATAAA	-14	NA	97437697	97560671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68650_11	chr7	+	2139	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	18	-33	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	51.4204358644479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCATGTCCTCTTCTC	NA	False	NA	12	True	AATAAA	-21	NA	97437765	97560456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68651_8	chr7	+	3306	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-27	-10	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	51.4204358644479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTACAGGAAGTGT	NA	False	NA	9	True	AATAAA	-10	NA	97437720	97561578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68652_3	chr7	+	3507	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-21	-10	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTACAGGAAGTGT	NA	False	NA	9	True	AATAAA	-10	NA	97437726	97561578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68653_9	chr7	+	2389	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-25	-33	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCATGTCCTCTTCTC	NA	False	NA	12	True	AATAAA	-21	NA	97437722	97560456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68655_7	chr7	+	3040	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	15	10	15	-10	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTACAGGAAGTGT	NA	False	NA	9	True	AATAAA	-10	NA	97492156	97561578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68657_3	chr7	+	1911	15	NIC	ENSMUSG00000030774.14	novel	3065	15	NA	NA	24	-28	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	60.5657426576565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTCTTCTCCTTTC	NA	False	NA	17	True	AATAAA	-26	NA	97492165	97560461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_97492349_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
Isoform_68658_3	chr7	+	3817	6	NNC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	97.0125765042863	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTCAGGTGAGGTGT	NA	False	NA	7	True	AATAAA	-14	NA	98352304	98367264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_98352686_98356203_98356325_98357143_98357238_98359332_98359441_98362065_98362103_98364188
Isoform_6866_46	chr11	-	2888	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	6853	False	NA	-7	True	AATAAA	-17	NA	97877277	97814063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
Isoform_68661_36	chr7	+	3721	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	0	2	0	-2	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGGTGAGGTGTTTT	NA	False	NA	10	True	AATAAA	-17	NA	98352309	98367267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
Isoform_68666_3	chr7	+	4046	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	862	12	5	-12	multi-exon	FALSE	canonical	3	32	junction_2	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAAACACCACTTTC	NA	False	NA	-6	True	AATAAA	-4	NA	98917557	98969547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_98918521_98964895_98965110_98966678
Isoform_68667_4	chr7	+	2509	4	FSM	ENSMUSG00000055407.15	ENSMUST00000208924.2	2906	4	392	5	18	-4	multi-exon	FALSE	canonical	0	0	junction_3	32.8768746825012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCAGTGTCTCTGGCT	NA	False	NA	8	True	AATAAA	-14	NA	98917570	98986339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
Isoform_68668_32	chr7	+	2306	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	29	0	29	0	multi-exon	FALSE	canonical	3	44	junction_2	18	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917581	98986344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_98918521_98964895_98965110_98985191
Isoform_68669_6	chr7	+	3719	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	-1	893	-1	-1	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99030619	99110191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
Isoform_68670_3	chr7	+	2259	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	294	6281	0	-4823	multi-exon	TRUE	canonical	2	3	junction_8	2.32557176274323	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATTTGGATATG	NA	False	NA	NA	False	AATAGA	-15	NA	99876894	99921793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
Isoform_68671_5	chr7	+	1987	12	ISM	ENSMUSG00000047248.21	ENSMUST00000098259.11	6602	32	118	59032	70	3237	5prime_fragment	FALSE	canonical	3	36	junction_4	6.99704778359777	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAACCCCACAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100021557	100059636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538
Isoform_68672_373	chr7	+	1571	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	21	2396	4	322	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTCTTTCTCATAT	NA	False	NA	12	True	CATAAA	-14	NA	100142564	100148831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
Isoform_68677_84	chr7	+	833	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	1	557	1	33	multi-exon	FALSE	canonical	3	255	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	7572	False	NA	29	True	AATAAA	-38	NA	100186307	100189019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100186400_100188278
Isoform_68678_6	chr7	+	1424	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-27	-6	2	6	multi-exon	FALSE	canonical	3	255	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTTCTCATTTTTAT	7544	False	NA	NA	False	NA	NA	NA	100186279	100189582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100186400_100188278
Isoform_68679_88	chr7	+	3025	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	83	2	83	-2	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	9	True	AATAAA	-17	NA	100256979	100290473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_68680_7	chr7	+	3226	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	-119	3	-15	-3	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256777	100290472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_68682_32	chr7	+	3034	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	4	72	4	-72	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGGATTGACTCTTT	NA	False	NA	2	True	AATACA	-12	NA	100256900	100290403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_68690_212	chr7	+	3103	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	111	0	7	0	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256903	100290475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_68692_10	chr7	+	3181	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	30	3	30	-3	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256822	100290472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_68694_10	chr7	+	3204	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	7	3	7	-3	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256799	100290472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
Isoform_6870_7	chr11	-	1288	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	280	3	28	-3	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCCTCACTTCTTATTT	NA	False	NA	0	True	ATTAAA	-23	NA	97886727	97880406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
Isoform_68702_3	chr7	+	4167	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-99	9	-14	-9	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100355827	100488380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
Isoform_68704_11	chr7	+	1169	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-78	2986	7	-1	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGAGCCTCCCCTCGTGC	NA	False	NA	8	True	NA	NA	NA	100355848	100485403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
Isoform_68705_8	chr7	+	4348	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-28	-4	14	4	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAAATTAAGTTTTG	NA	False	NA	-3	True	TATAAA	-14	NA	100757953	100933593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
Isoform_68706_7	chr7	+	1256	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	144	0	144	0	multi-exon	TRUE	canonical	3	28	junction_2	26.7581763205193	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	False	NA	7	True	AATAAA	-18	NA	100970463	100995515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
Isoform_68707_9	chr7	+	5137	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	10	0	10	0	multi-exon	FALSE	canonical	3	35	junction_3	24.8085044217444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	100997283	101061101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_68708_4	chr7	+	4256	30	ISM	ENSMUSG00000032812.19	ENSMUST00000084895.12	4404	31	7315	-148	-103	-2	3prime_fragment	FALSE	canonical	3	63	junction_1	19.9627477085721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101034711	101061099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_68709_54	chr7	+	2970	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	31	692	31	0	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101043605	101061101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
Isoform_6871_4	chr11	-	1589	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	-22	4	-22	-4	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	-1	True	ATTAAA	-22	NA	97887029	97880407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
Isoform_68711_7	chr7	+	2247	17	FSM	ENSMUSG00000001829.18	ENSMUST00000106998.8	2287	17	43	-3	-9	3	multi-exon	FALSE	canonical	2	6	junction_4	246.748226943984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCTTGCCCTCATGCC	NA	False	NA	-19	True	AATAAA	-27	NA	101312954	101437020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101360617_101360708_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
Isoform_68712_648	chr7	+	2154	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	118	2355	-6	3	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCTTGCCCTCATGCC	NA	False	NA	-19	True	AATAAA	-27	NA	101312957	101437020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
Isoform_68713_11	chr7	+	3150	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	76	1401	4	957	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTCTCCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	101312915	101437974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
Isoform_68715_12	chr7	+	1260	7	NNC	ENSMUSG00000001829.18	novel	2199	14	NA	NA	3	794	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	280.167806858675	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCATGTTCATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	101312966	101401323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101400987
Isoform_68717_9	chr7	+	3265	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-18	-2310	2	-1	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7819	False	NA	9	True	NA	NA	NA	101545616	101551055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
Isoform_68718_16	chr7	+	973	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-30	-6	-10	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7807	False	NA	25	True	AATAAA	-25	NA	101545604	101548751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
Isoform_68719_64	chr7	+	810	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-17	2310	-8	1	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTCTATTCCCTGT	7809	False	NA	20	True	AATAAA	-20	NA	101545606	101548746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_6872_4	chr11	-	3385	14	FSM	ENSMUSG00000020882.18	ENSMUST00000017552.13	3396	14	4	7	-3	-7	multi-exon	FALSE	canonical	2	14	junction_1	30.0140006777902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913456	97892340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_68720_18	chr7	+	844	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-47	2306	30	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7779	False	NA	24	True	AATAAA	-24	NA	101545576	101548750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_68721_4	chr7	+	3293	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	98	junction_2	210.842802817644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7786	False	NA	9	True	NA	NA	NA	101545583	101551055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106
Isoform_68722_4	chr7	+	955	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	98	junction_2	210.842802817644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7819	False	NA	24	True	AATAAA	-24	NA	101545616	101548750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106
Isoform_68723_16	chr7	+	810	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7809	False	NA	25	True	AATAAA	-25	NA	101545606	101548751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_68724_5	chr7	+	879	6	NIC	ENSMUSG00000030649.19	novel	836	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7734	False	NA	19	True	AATAAA	-19	NA	101545531	101548745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_68725_5	chr7	+	731	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-20	-61	-12	1	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTATTCCCTGTTT	7805	False	NA	22	True	AATAAA	-22	NA	101545602	101548748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_68726_15	chr7	+	1277	6	NIC	ENSMUSG00000030649.19	novel	818	5	NA	NA	-18	1	intron_retention	FALSE	canonical	3	43	junction_1	203.291318063512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTATTCCCTGTTT	8254	False	NA	22	True	AATAAA	-22	NA	101546051	101548748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_68728_795	chr7	+	1075	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	43	1	-31	-1	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTCTGTCCTGCCCAC	7070	False	NA	27	True	GATAAA	-31	NA	101555153	101561109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_68729_648	chr7	+	1137	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-19	1	-19	-1	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTCTGTCCTGCCCAC	7008	False	NA	27	True	GATAAA	-31	NA	101555091	101561109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_6873_3	chr11	-	3535	14	NIC	ENSMUSG00000020882.18	novel	2236	14	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	30.0524196861764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913471	97892340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_68730_39	chr7	+	1187	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-86	18	-86	-18	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGCTGGTTCAACC	6941	False	NA	10	True	GATAAA	-14	NA	101555024	101561092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
Isoform_68738_23	chr7	+	7106	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-15	4	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2078	False	NA	32	True	AATAAA	-20	NA	101583302	101664166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
Isoform_6874_3	chr11	-	2950	10	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-461	-4	combination_of_known_junctions	TRUE	canonical	2	14	junction_1	32.401798456411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTTTCTTTGT	NA	False	NA	-4	True	TATAAA	-29	NA	97903838	97892337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637
Isoform_68740_3	chr7	+	7163	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTGCTAAGCTCTTTG	2158	False	NA	27	True	AATAAA	-15	NA	101583382	101664161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
Isoform_68748_53	chr7	+	3234	11	FSM	ENSMUSG00000099481.7_ENSMUSG00000100254.2	ENSMUST00000094130.4	2298	11	-257	-679	-10	-2	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714707	101732967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_6875_12	chr11	-	1759	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	23	junction_7	26.3358384884341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913474	97895750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_68751_6	chr7	+	3063	10	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	0	intron_retention	FALSE	canonical	1	6	junction_7	32.9975681857442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714707	101732969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
Isoform_68753_5	chr7	+	3315	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	0	intron_retention	FALSE	canonical	2	6	junction_7	31.3434203621749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714707	101732969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728105_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_68754_20	chr7	+	3202	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	-10	-2	intron_retention	FALSE	canonical	2	17	junction_2	28.6462912084619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714707	101732967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_68757_6	chr7	+	3139	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	-9	1	-9	-1	multi-exon	FALSE	canonical	2	5	junction_1	31.0606734006004	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTTGCCGATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	101714708	101732968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_68759_3	chr7	+	3094	10	ISM	ENSMUSG00000070425.14	ENSMUST00000123372.8	4847	22	-205	13110	-205	-12572	5prime_fragment	FALSE	canonical	2	6	junction_1	30.7643372177013	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACAGTATGTGTTGCC	NA	False	NA	NA	False	AATAAA	-8	NA	101714714	101732961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_101715012_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_6876_10	chr11	-	1876	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	4	0	-3	0	multi-exon	FALSE	canonical	3	20	junction_6	26.3832596335041	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_68760_16	chr7	+	3103	11	Fusion	ENSMUSG00000099481.7_ENSMUSG00000100254.2	novel	2298	11	NA	NA	12	-2	intron_retention	FALSE	canonical	3	7	junction_1	28.9048438847194	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGTGTTGCCGATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101714976	101732967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
Isoform_68761_37	chr7	+	1988	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	43	3	0	-3	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	637	False	NA	13	True	AATAAA	-20	NA	101872277	101887771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_68763_86	chr7	+	2000	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	2	-801	0	-3	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	637	False	NA	13	True	AATAAA	-20	NA	101872277	101887771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_68766_5	chr7	+	1896	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	63.6948977548438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	614	False	NA	10	True	AATAAA	-17	NA	101872254	101887768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_68767_9	chr7	+	1911	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	611	False	NA	10	True	AATAAA	-17	NA	101872251	101887768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_68768_7	chr7	+	2135	7	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	67.2210284558833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	637	False	NA	13	True	AATAAA	-20	NA	101872277	101887771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
Isoform_68769_8	chr7	+	2148	7	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	61.1201003489578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGGTAGGTATGTTGCT	637	False	NA	14	True	AATAAA	-21	NA	101872277	101887772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
Isoform_6877_4	chr11	-	1721	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	22.8711807541917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
Isoform_68775_8	chr7	+	4684	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-506	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916506	102086525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
Isoform_68778_3	chr7	+	4079	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-1	7	-1	-7	multi-exon	TRUE	canonical	2	5	junction_10	17.5852116683732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101917011	102086518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
Isoform_6878_12	chr11	-	3049	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	1	0	1	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5360	False	NA	-2	True	ATTAAA	-15	NA	97944287	97927448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
Isoform_68781_91	chr7	+	3156	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	-4	845	-4	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102090897	102118133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
Isoform_68782_1163	chr7	+	3026	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	125	846	-63	243	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091026	102118132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
Isoform_68783_110	chr7	+	3051	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	101	845	-87	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102091002	102118133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
Isoform_6879_38	chr11	-	2943	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	107	0	107	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5466	False	NA	-2	True	ATTAAA	-15	NA	97944181	97927448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
Isoform_68793_4	chr7	+	1483	3	FSM	ENSMUSG00000072244.12	ENSMUST00000144538.2	1490	3	7	0	5	0	multi-exon	FALSE	canonical	3	703	junction_1	31	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103868006	103876940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_103868091_103874713_103875188_103876015
Isoform_68794_137	chr7	+	3513	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	21	-247	intron_retention	TRUE	canonical	0	0	junction_8	239.859203492382	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868022	103884112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
Isoform_68797_18	chr7	+	3578	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-25	-248	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868610	103884111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
Isoform_68798_3	chr7	+	2809	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-51	-1043	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGATTGTAGCTTTGGT	NA	False	NA	14	True	AATAAA	-19	NA	103868584	103883316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
Isoform_68799_5	chr7	+	2489	6	FSM	ENSMUSG00000030897.6	ENSMUST00000033187.6	2484	6	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_2	2.13541565040626	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTTATCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	105053774	105057954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105053961_105054095_105054198_105054376_105054484_105054688_105055335_105056007_105056358_105056856
Isoform_68800_8	chr7	+	2337	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	236	0	150	0	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGCTCAGATTATTCG	NA	False	NA	NA	False	GATAAA	-15	NA	105075173	105085546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
Isoform_68801_125	chr7	+	2380	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	32	0	32	0	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCCTATTTCTTCTTCC	NA	False	NA	11	True	AATAAA	-21	NA	105203598	105207596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
Isoform_68802_38	chr7	+	596	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	392	2285	0	4	multi-exon	FALSE	canonical	3	351	junction_1	22.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCTATGGGTACCAG	NA	False	NA	11	True	AATAAA	-20	NA	105289654	105290559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_68803_88	chr7	+	564	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	424	2285	32	4	multi-exon	FALSE	canonical	3	351	junction_1	22.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCTATGGGTACCAG	NA	False	NA	11	True	AATAAA	-20	NA	105289686	105290559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_68804_8	chr7	+	961	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	515	1797	0	1	multi-exon	FALSE	canonical	3	351	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289777	105291047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234
Isoform_68806_9	chr7	+	646	4	FSM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	-126	9	-23	1	multi-exon	FALSE	canonical	3	28	junction_3	163.903087897154	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289631	105291047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234_105290368_105290828
Isoform_68807_34	chr7	+	659	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	32	3	32	1	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289686	105291047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
Isoform_68808_34	chr7	+	574	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	117	3	1	1	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTGCTTTCTTG	NA	False	NA	NA	False	AATAAA	-8	NA	105289771	105291047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
Isoform_6881_128	chr11	-	2447	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	6	6148	0	2387	multi-exon	FALSE	canonical	3	137	junction_5	8.14567620374923	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTACCATCAGGGGACC	3171	False	NA	-16	True	AATAAA	-16	NA	98040432	97979529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
Isoform_68810_305	chr7	+	1714	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	75	6	-4	1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385873	105392126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_68811_42	chr7	+	1755	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	34	6	34	1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385832	105392126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_68813_5	chr7	+	1761	13	FSM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	-15	3	-15	1	multi-exon	FALSE	canonical	0	0	junction_1	93.7171794401764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385916	105392126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_68815_5	chr7	+	2056	12	NIC	ENSMUSG00000030890.17	novel	1749	13	NA	NA	-16	1	intron_retention	FALSE	canonical	3	270	junction_7	30.9136360294609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTCGTGTGGGGAC	NA	False	NA	22	True	AATAAA	-12	NA	105385915	105392126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
Isoform_68816_4	chr7	+	985	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-11	-4401	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTGTGTTTGTCCCAC	NA	False	NA	13	True	AATAAA	-20	NA	106842217	106895202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
Isoform_68817_65	chr7	+	3815	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-7	9	-7	-6	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATACAGTCGTTGTC	NA	False	NA	NA	False	AGTAAA	-10	NA	106969989	107147854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_68818_35	chr7	+	3884	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-73	6	-11	-3	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969923	107147857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_6882_13	chr11	-	2517	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-63	2397	combination_of_known_junctions	TRUE	canonical	3	15	junction_14	36.7548414137095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGACCCTGCCTGAAT	2311	False	NA	-6	True	AATAAA	-26	NA	98041292	97979519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
Isoform_68820_3	chr7	+	4039	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-228	6	-166	-3	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969768	107147857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_68823_3	chr7	+	3870	7	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	53.2679286458768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATACAGTCGTTGTC	NA	False	NA	NA	False	AGTAAA	-10	NA	106969929	107147854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
Isoform_68824_8	chr7	+	3530	6	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	62.0064512772663	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAGTCGTTGTCTCA	NA	False	NA	NA	False	AGTAAA	-13	NA	106969925	107147857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
Isoform_68825_3	chr7	+	1689	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	-11	7	-11	-7	multi-exon	FALSE	canonical	2	7	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCACTCACTGCCTTAA	NA	False	NA	NA	False	AATACA	-17	NA	107166641	107190294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_107167102_107170243_107170533_107189354
Isoform_68826_5	chr7	+	777	6	ISM	ENSMUSG00000036528.17	ENSMUST00000040056.15	3310	25	-55	47230	4	-35	5prime_fragment	FALSE	canonical	3	32	junction_3	5.49181208709839	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAACAGAAAGAACAAG	7249	False	NA	NA	False	NA	NA	NA	107194417	107296862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773
Isoform_68827_4	chr7	+	950	6	ISM	ENSMUSG00000036528.17	ENSMUST00000040056.15	3310	25	-228	47230	-169	-35	5prime_fragment	FALSE	canonical	3	32	junction_3	5.49181208709839	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAACAGAAAGAACAAG	7076	False	NA	NA	False	NA	NA	NA	107194244	107296862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773
Isoform_68829_1181	chr7	+	1248	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	0	1266	0	677	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	1181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTATCTGATGCG	NA	False	NA	NA	False	AATAAA	-19	NA	108533623	108540892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
Isoform_68836_2510	chr3	+	508	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	-24	-40	-24	40	mono-exon	FALSE	NA	NA	NA	NA	NA	2510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	24387207	24387715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_24387200_24387700
Isoform_68837_86	chr7	+	1113	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	-4	0	4	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAATCTGGAAGTTTT	NA	False	NA	24	True	AATAAA	-28	NA	109118402	109121578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_68838_136	chr7	+	559	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	599	0	2	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGCATCCTTCC	NA	False	NA	4	True	ATTAAA	-16	NA	109118353	109120975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_6884_4	chr11	-	2375	14	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	17	2387	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	38.3036760328971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTACCATCAGGGGACC	3188	False	NA	-16	True	AATAAA	-16	NA	98040415	97979529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040141
Isoform_68840_8	chr7	+	639	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	-80	599	-80	2	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGCATCCTTCC	NA	False	NA	4	True	ATTAAA	-16	NA	109118273	109120975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_68841_7	chr7	+	337	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_3	6697.28616679921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTGCATCCTTCCTT	NA	False	NA	6	True	ATTAAA	-18	NA	109118402	109120977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109118430_109118791_109118856_109119124_109119201_109120807
Isoform_68843_33	chr7	+	728	5	NIC	ENSMUSG00000046364.15	novel	526	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6920.42061582965	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118435	109120973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109118683_109118791_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_68845_15	chr7	+	857	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	1	5	intron_retention	FALSE	canonical	3	12965	junction_3	1855.24883027108	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTGCATCCTTCCTTG	NA	False	NA	7	True	ATTAAA	-19	NA	109118420	109120978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109118856_109119124_109119201_109119674_109119850_109120807
Isoform_6885_14	chr11	-	2644	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	-25	8	8	-7	multi-exon	FALSE	canonical	3	35	junction_1	53.6447367918524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATGTGCCTCTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98084111	98042987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68852_31	chr7	+	779	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	24	225	24	-4	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGCATCAATCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	109302920	109311171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68853_31	chr7	+	741	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	62	225	0	-4	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGCATCAATCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	109302958	109311171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68854_26	chr7	+	999	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	62	-33	0	33	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCCCACATTGTAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	109302958	109311429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68857_5	chr7	+	1014	6	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	165.285692060747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302900	109311388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109302984_109303152_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68858_5	chr7	+	956	6	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	165.285692060747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302958	109311388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109302984_109303152_109303378_109304159_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_6886_17	chr11	-	2805	18	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-8	-7	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATGTGCCTCTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98084110	98042987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68860_5	chr7	+	1102	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	87	8	25	-8	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302983	109311388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68861_9	chr7	+	819	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	153	225	91	-4	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGCATCAATCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	109303049	109311171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68863_8	chr7	+	1022	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	168	7	106	-7	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTCATTTTATTGC	NA	False	NA	NA	False	AATAAA	-18	NA	109303064	109311389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
Isoform_68866_4	chr7	+	4225	25	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	191.489515052391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTGATCTGATTG	7239	False	NA	22	True	ATTAAA	-17	NA	109617521	109655323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109617716_109626277_109626356_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_68868_68	chr7	+	4229	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	493	0	1	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTGATCTGATTG	7239	False	NA	22	True	ATTAAA	-17	NA	109617521	109655323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_68869_22	chr7	+	4281	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	-11	493	-11	1	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTGATCTGATTG	7187	False	NA	22	True	ATTAAA	-17	NA	109617469	109655323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_6887_98	chr11	-	2516	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	-7	294	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	-8	True	AATGAA	-15	NA	98084109	98048284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68871_8	chr7	+	4719	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	7239	False	NA	NA	False	AATGAA	-36	NA	109617521	109655813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
Isoform_68873_47	chr7	+	3003	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	1	-1	1	1	multi-exon	FALSE	canonical	3	81	junction_4	55.3423285861133	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATACTTTTTGTTTGT	NA	False	NA	13	True	AATACA	-11	NA	109660917	109694595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
Isoform_68875_3	chr7	+	2915	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	-21	109	-21	-109	multi-exon	TRUE	canonical	3	81	junction_4	55.3423285861133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGGGTTAGTGAGTT	NA	False	NA	-97	True	AATGAA	-10	NA	109660895	109694485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
Isoform_68876_29	chr7	+	3000	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	1	-370	1	1	multi-exon	FALSE	canonical	3	74	junction_4	56.3191698171137	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATACTTTTTGTTTGT	NA	False	NA	13	True	AATACA	-11	NA	109660917	109694595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
Isoform_6888_28	chr11	-	2708	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	10	5306	-7	292	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGCTGACCTTATTGC	NA	False	NA	-10	True	AATGAA	-13	NA	98084109	98048286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68881_418	chr7	+	3392	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	26	1	26	-1	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTAAATCTTCACGGT	NA	False	NA	25	True	ATTAAA	-22	NA	109721278	109742492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_6889_4	chr11	-	6029	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	9	1986	-8	107	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAGCCAT	NA	False	NA	NA	False	GATAAA	-7	NA	98084110	98044966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68894_14	chr7	+	3274	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-21	166	-21	-166	multi-exon	TRUE	canonical	3	352	junction_6	26.6084573021436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAACAATATTTGGC	NA	False	NA	NA	False	AATACA	-20	NA	109721231	109742327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_689_7	chr10	-	1064	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	113	262	-15	-262	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAAGCAGACTGGTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	13744588	13528456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_68902_23	chr7	+	3248	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	119.043409449383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTAAATCTTCACGGT	NA	False	NA	25	True	ATTAAA	-22	NA	109721275	109742492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
Isoform_68906_170	chr7	+	3938	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	21	68	0	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820938	109882645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_68907_95	chr7	+	3967	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-8	68	-8	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820909	109882645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_68908_13	chr7	+	4044	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	20	-37	0	37	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	109820937	109882750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_6891_25	chr11	-	2149	16	ISM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	9	8333	-8	-2735	5prime_fragment	FALSE	canonical	3	176	junction_2	32.5798847279865	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTTGCCTCCATAGA	NA	False	NA	NA	False	AATAAA	-20	NA	98084110	98051313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68911_10	chr7	+	4064	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-32	-5	-32	5	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGTTACATTAATAAAA	NA	False	NA	82	True	ATTAAA	-25	NA	109820885	109882718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
Isoform_68917_8	chr7	+	4027	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	-62	-476	-62	-10	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAGAACAAATGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	110367350	110411602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_68919_8	chr7	+	4102	15	FSM	ENSMUSG00000005686.18	ENSMUST00000213373.2	3337	15	-289	-476	279	-10	multi-exon	FALSE	canonical	3	8	junction_1	15.4927567012485	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAGAACAAATGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	110367828	110411602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
Isoform_6892_10	chr11	-	1378	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	-7	1	-7	-1	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGGACTTTGCATATT	NA	False	NA	NA	False	AATAAA	-14	NA	98084109	98060737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
Isoform_68920_5	chr7	+	1120	2	FSM	ENSMUSG00000005609.17	ENSMUST00000146709.2	765	2	-18	-337	0	337	multi-exon	FALSE	canonical	3	174	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAAG	543	False	NA	NA	False	NA	NA	NA	110628201	110630353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_110628389_110629420
Isoform_68925_18	chr7	+	3015	22	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	14	3960	14	47	5prime_fragment	FALSE	canonical	3	158	junction_8	9.61456755642458	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGGAAGGTGGAGAGA	513	False	NA	11	True	NA	NA	NA	110628171	110651624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508
Isoform_68927_19	chr7	+	4256	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	44	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	543	False	NA	31	True	AATAAA	-17	NA	110628201	110655584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
Isoform_68929_11	chr7	+	4723	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-23	-3	-21	3	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGAATCTTCTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	111622689	111709693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_68930_6	chr7	+	5621	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-23	-901	-21	0	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622689	111710591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_68931_18	chr7	+	5558	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-18	0	-18	0	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622692	111710591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_68932_22	chr7	+	4647	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-7	900	-7	1	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAATCTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	111622703	111709691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
Isoform_68933_4	chr7	+	4223	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	224	7	25	-7	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAAACTCTTCGCTGTTT	3553	False	NA	NA	False	AATGAA	-6	NA	112027136	112190892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
Isoform_68934_10	chr7	+	1546	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	189	2719	-10	3	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGCTCAAGTTCATTAG	3518	False	NA	NA	False	AATAAA	-37	NA	112027101	112188180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
Isoform_68935_21	chr7	+	2834	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	72	2	11	-2	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3819	False	NA	NA	False	AATAAA	-18	NA	112806743	112913331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_68936_5	chr7	+	2903	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	4	1	4	-1	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3751	False	NA	NA	False	AATAAA	-19	NA	112806675	112913332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_68937_11	chr7	+	2869	20	NNC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	18.7486656958292	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3781	False	NA	NA	False	AATAAA	-18	NA	112806705	112913331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_68938_4	chr7	+	2745	19	NIC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	21.9418423211098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTTCCCAATTGATA	3781	False	NA	NA	False	AATAAA	-19	NA	112806705	112913332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_112806852_112833830_112833904_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
Isoform_6894_64	chr11	-	2388	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	31	0	-22	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291285	98279502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
Isoform_68945_9	chr7	+	4334	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	0	628	0	425	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCTATTGTATTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	113113040	113170090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_68946_38	chr7	+	4302	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	34	626	6	427	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113074	113170092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_68950_5	chr7	+	4923	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	34	5	6	-5	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGATGTACTCCTT	NA	False	NA	9	True	AATAAA	-17	NA	113113074	113170713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_68951_5	chr7	+	4298	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	6	427	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113074	113170092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
Isoform_68956_318	chr7	+	1428	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	51	0	11	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692586	115704445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
Isoform_68957_252	chr7	+	1466	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	13	0	13	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692548	115704445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
Isoform_68966_4	chr7	+	233	2	ISM	ENSMUSG00000030659.15	ENSMUST00000183175.8	1913	13	-43	30869	3	-27	5prime_fragment	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAGAAAATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	116103606	116108809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_116103720_116108689
Isoform_68967_7	chr7	+	1500	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	13.8283123417944	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACACGTTTTTATCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	116103618	116139820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
Isoform_6897_134	chr11	-	724	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	9	14	9	-14	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGTGTCAACTGGCG	NA	False	NA	-13	True	AATAAA	-12	NA	98329808	98328547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
Isoform_68973_13	chr7	+	5062	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	4	7	4	1	multi-exon	FALSE	canonical	3	57	junction_14	14.3789970288458	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATCTTGTTGGATCT	NA	False	NA	3	True	AATAAA	-13	NA	118311778	118336240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
Isoform_68974_12	chr7	+	4980	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	41	junction_14	17.3487634094403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATCTTGTTGGATCT	NA	False	NA	3	True	AATAAA	-13	NA	118311774	118336240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
Isoform_68975_16	chr7	+	1113	9	NIC	ENSMUSG00000030982.20	novel	1102	9	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	189.52226122543	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTAACTGTGCAAAATT	NA	False	NA	NA	False	NA	NA	NA	118339965	118361361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
Isoform_68977_664	chr7	+	3101	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	517	1479	-4	0	multi-exon	FALSE	canonical	3	302	junction_1	75.0223744403406	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	8	True	ATTAAA	-19	NA	118339965	118440710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
Isoform_68979_13	chr7	+	3128	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	488	1481	-18	-2	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGCAGTGTCTCGGTG	NA	False	NA	6	True	ATTAAA	-17	NA	118339936	118440708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
Isoform_6898_153	chr11	-	2058	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	123	3	123	-3	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTGGCCTCTGCTTC	1446	False	NA	-2	True	AATAAA	-20	NA	98478071	98472084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
Isoform_68982_112	chr7	+	1449	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	-15	3	-15	-3	multi-exon	FALSE	canonical	3	469	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119340294_119341157
Isoform_68983_3	chr7	+	1086	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-15	-319	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTGTTTTGTTGA	NA	False	NA	8	True	TATAAA	-19	NA	119495089	119515975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
Isoform_68984_5	chr7	+	1023	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	-3	-84	0	1	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTTTGTTGATT	NA	False	NA	10	True	TATAAA	-21	NA	119495089	119515977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
Isoform_68985_5	chr7	+	890	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	6	-21	0	1	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTTTGTTGATT	NA	False	NA	10	True	TATAAA	-21	NA	119495089	119515977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
Isoform_68988_7	chr7	+	1463	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	24	-3	-18	3	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCTTTTTCTTCTA	NA	False	NA	8	True	ATTAAA	-17	NA	119701599	119720212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
Isoform_68989_40	chr7	+	1390	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	23	71	-19	-71	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAACCAGAGCCTGTGC	NA	False	NA	-66	True	AATAAA	-29	NA	119701598	119720138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
Isoform_6899_9	chr11	-	2107	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	72	5	72	-5	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCATGTCTGGCCTCTGCT	1395	False	NA	-4	True	AATAAA	-18	NA	98478122	98472086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
Isoform_68990_85	chr7	+	1609	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	35	252	-29	-252	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTTCTTGCATTCTT	NA	False	NA	17	True	AATAAA	-13	NA	120234433	120258495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
Isoform_68992_18	chr7	+	1870	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	32	-6	32	6	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCAGCTGGTTCCTTC	NA	False	NA	28	True	AGTAAA	-20	NA	120234430	120258753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
Isoform_68996_147	chr7	+	3088	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	37	3455	37	-6	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGTTTGGCCTTTAT	NA	False	NA	3	True	AATATA	-10	NA	120442090	120503218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_68997_37	chr7	+	2633	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	1	3946	1	-1	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCACTCTTGATAGCCT	NA	False	NA	9	True	TATAAA	-19	NA	120442054	120502727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_69_65	ERCC-00095	+	508	1	FSM	ERCC-00095A	DQ516759	513	1	2	3	2	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAT	NA	False	NA	NA	False	NA	NA	NA	2	510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00095_+_0_500
Isoform_690_4	chr10	-	1472	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-30	-3	-7	3	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAGAATGGCTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	13744731	13528191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_69000_7	chr7	+	3117	19	NIC	ENSMUSG00000035064.18	novel	3047	18	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	28.2703002556253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGTTTGGCCTTTAT	NA	False	NA	3	True	AATATA	-10	NA	120442840	120503218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_120443009_120443918_120444013_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_69001_4	chr7	+	3072	18	FSM	ENSMUSG00000035064.18	ENSMUST00000106489.9	3047	18	-32	7	1	-7	multi-exon	FALSE	canonical	2	9	junction_1	20.5168510369059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTTTGGCCTTTA	NA	False	NA	2	True	AATATA	-9	NA	120442790	120503217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120443009_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
Isoform_69005_170	chr7	+	2579	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	22	1593	22	18	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGGTTTAATATTTT	NA	False	NA	31	True	AATAAA	-33	NA	120517028	120545062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_69006_119	chr7	+	3019	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-5	1180	-5	3	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATAGTGCTGCTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	120517001	120545475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
Isoform_69009_59	chr7	+	1697	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	126	0	126	0	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9553	False	NA	7	True	AATAAA	-16	NA	120633793	120676058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
Isoform_6901_3	chr11	-	2048	11	ISM	ENSMUSG00000017210.15	ENSMUST00000125064.8	4577	24	17757	6	-11	-6	3prime_fragment	FALSE	canonical	3	123	junction_5	22.1912144778063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98601903	98595422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598
Isoform_69014_23	chr7	+	1706	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	114	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	108.278287297131	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9541	False	NA	7	True	AATAAA	-16	NA	120633781	120676058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675355
Isoform_69016_8	chr7	+	2342	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	205	4561	-60	1	5prime_fragment	FALSE	canonical	3	624	junction_1	34.3685903115039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTGTCCCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	121666602	121676856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330
Isoform_69017_7	chr7	+	2534	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	11	4563	11	-1	5prime_fragment	FALSE	canonical	3	624	junction_1	34.3685903115039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTTGTCCCCATTG	NA	False	NA	NA	False	NA	NA	NA	121666408	121676854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330
Isoform_69020_21	chr7	+	4836	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	12	1	12	-1	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCTCTTTCCTTC	NA	False	NA	8	True	ATTAAA	-13	NA	121666409	121681416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_69021_65	chr7	+	4579	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	269	1	-3	-1	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCTCTTTCCTTC	NA	False	NA	8	True	ATTAAA	-13	NA	121666666	121681416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_69023_86	chr7	+	1237	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	269	3343	-3	240	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTCTTAAGTCTGTTT	NA	False	NA	37	True	AATAAA	-30	NA	121666666	121678074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_69029_8	chr7	+	4884	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	-36	1	-36	-1	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCTCTTTCCTTC	NA	False	NA	8	True	ATTAAA	-13	NA	121666361	121681416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
Isoform_6903_4	chr11	-	3416	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-5	-6	combination_of_known_junctions	TRUE	canonical	1	3	junction_25	38.4503003889436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620205	98595422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620129
Isoform_69032_4	chr7	+	672	5	NNC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	2	3505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	149.087851617763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCTAGCGTGTATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	121732265	121737862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737659_121737705
Isoform_69033_83	chr7	+	1531	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	1	0	1	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732264	121748267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
Isoform_69036_4	chr7	+	1403	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	6	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	141.324758977329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTGGTTTAGGCTC	NA	False	NA	7	True	AATAAA	-8	NA	121732282	121748260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121747279
Isoform_6904_12	chr11	-	3388	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	16	6	-1	-6	multi-exon	FALSE	canonical	3	102	junction_19	25.7353919729232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620245	98595422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
Isoform_69040_1292	chr7	+	2166	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	37	-4	-31	4	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	60	True	ATTAAA	-18	NA	121758698	121769100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
Isoform_69041_203	chr7	+	2189	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	14	-4	14	4	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	60	True	ATTAAA	-18	NA	121758675	121769100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
Isoform_69046_4	chr7	+	3102	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	-192	1	-192	-1	multi-exon	TRUE	canonical	0	0	junction_4	2.23257138743647	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121888327	122227877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
Isoform_69047_3	chr7	+	2897	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-763	4211	-627	1420	multi-exon	FALSE	canonical	3	123	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTTGTGTGTTCCCTG	6939	False	NA	NA	False	AATAAA	-13	NA	122569159	122579404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_122570351_122575158_122575259_122577798
Isoform_69049_4	chr7	+	4572	16	ISM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	-979	2439	-625	-1817	5prime_fragment	TRUE	canonical	3	56	junction_15	15.7499911816554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGGAAATGCAGA	6941	False	NA	NA	False	NA	NA	NA	122569161	122599341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747
Isoform_6905_9	chr11	-	2673	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	46	2	46	-2	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGCTTCTGTGATGTG	NA	False	NA	-2	True	NA	NA	NA	98666113	98658759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
Isoform_69053_65	chr7	+	262	3	ISM	ENSMUSG00000052707.9	ENSMUST00000206888.2	3625	9	-101	33907	-22	-18878	5prime_fragment	FALSE	canonical	3	106	junction_2	15.5	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	122723377	122743008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_122723556_122723890_122723939_122742972
Isoform_69054_8	chr7	+	541	3	ISM	ENSMUSG00000052707.9	ENSMUST00000206888.2	3625	9	-380	33907	-9	-18878	5prime_fragment	FALSE	canonical	3	106	junction_2	15.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	122723098	122743008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_122723556_122723890_122723939_122742972
Isoform_69055_4	chr7	+	2256	9	ISM	ENSMUSG00000052707.9	ENSMUST00000206126.2	3297	12	2401	1	2401	-1	3prime_fragment	FALSE	canonical	3	141	junction_5	14.0512454963964	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	122781544	122792952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
Isoform_69056_3	chr7	+	2731	18	NIC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-224	-5	combination_of_known_junctions	TRUE	canonical	3	9	junction_3	7.39025824684207	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTTCAGAGGTGCTG	NA	False	NA	10	True	AATAAA	-17	NA	122813778	122872471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_122814221_122828131_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
Isoform_69057_169	chr7	+	1305	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	55	9	-19	0	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCTACATCTGTACA	6879	False	NA	22	True	AATAAA	-22	NA	122977259	123029572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
Isoform_69058_61	chr7	+	1330	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	29	10	29	0	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	6853	False	NA	21	True	AATAAA	-21	NA	122977233	123029571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
Isoform_69059_4	chr7	+	420	2	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-18	-5231	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	6880	False	NA	NA	False	NA	NA	NA	122977260	122995469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_122977479_122995267
Isoform_6906_9	chr11	-	2513	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	51	157	51	-157	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCCCCTGAGCCT	NA	False	NA	1	True	TATAAA	-15	NA	98666108	98658914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
Isoform_69062_15	chr7	+	1482	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	0	5	0	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTTGACTT	4376	False	NA	2	True	AATAAA	-16	NA	123061513	123067222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
Isoform_69063_59	chr7	+	2380	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	0	9	0	-9	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAAAGAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	125043847	125061432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
Isoform_69064_26	chr7	+	2406	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	-26	9	-26	-9	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAAAGAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	125043821	125061432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
Isoform_69065_7	chr7	+	3588	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	160	1508	4	-1	multi-exon	TRUE	canonical	0	0	junction_6	3.9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTCCTTTACTATACA	NA	False	NA	NA	False	AATAAA	-14	NA	125151451	125177138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
Isoform_69066_6	chr7	+	3626	11	NIC	ENSMUSG00000030748.10	novel	5256	11	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	3.9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTTCCTTTACTATAC	NA	False	NA	NA	False	AATAAA	-13	NA	125151421	125177137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_125151501_125163723_125163909_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
Isoform_69067_3	chr7	+	1863	4	ISM	ENSMUSG00000032743.16	ENSMUST00000205462.2	4185	15	42319	1	6715	-1	3prime_fragment	FALSE	canonical	3	17	junction_1	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGGTACACTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	125471157	125473964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_125471425_125471858_125472020_125472103_125472193_125472618
Isoform_69068_125	chr7	+	4157	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-55	7	-55	-7	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTGTTTGAGCTGC	NA	False	NA	12	True	AATAAA	-9	NA	125871735	125894181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
Isoform_69071_19	chr7	+	4208	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-106	7	-106	-7	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTGTTTGAGCTGC	NA	False	NA	12	True	AATAAA	-9	NA	125871684	125894181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
Isoform_69074_16	chr7	+	1150	8	ISM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	0	4025	0	-2808	5prime_fragment	FALSE	canonical	3	161	junction_4	13.3355440344171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGACTGAATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	126028237	126041048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008
Isoform_69075_343	chr7	+	2204	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	34	-4	1	4	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGTGCCTGCAAGC	NA	False	NA	16	True	AATAAA	-19	NA	126028271	126045077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_69076_5	chr7	+	2558	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	-320	-4	-13	4	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGTGCCTGCAAGC	NA	False	NA	16	True	AATAAA	-19	NA	126027917	126045077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_69078_12	chr7	+	2472	12	FSM	ENSMUSG00000030727.13	ENSMUST00000151304.8	2782	12	308	2	1	-2	multi-exon	FALSE	canonical	3	161	junction_4	15.3730471446749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGTTGCCTTGTGCCT	NA	False	NA	10	True	AATAAA	-13	NA	126028238	126045071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126044109_126044468
Isoform_6908_12	chr11	-	5216	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	229.626625065073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915019	98883774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_69081_9	chr7	+	2305	12	FSM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	-25	-1	-13	1	multi-exon	FALSE	canonical	3	161	junction_3	14.2272001159925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCCTTGTGCCTGCA	NA	False	NA	13	True	AATAAA	-16	NA	126028586	126045074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
Isoform_69082_566	chr7	+	1685	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-9	3	-9	-3	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCAGCTTGTCTTGTGT	NA	False	NA	-3	True	AATAAA	-14	NA	126086523	126089896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
Isoform_69083_27	chr7	+	1753	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-75	1	-75	-1	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCTTGTCTTGTGTCT	NA	False	NA	-1	True	AATAAA	-16	NA	126086457	126089898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
Isoform_69086_6	chr7	+	1245	11	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	179.607043291737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_126248650_126260223_126260321_126261737_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_69087_24	chr7	+	1410	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	7	146	4	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
Isoform_69088_309	chr7	+	1159	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	7	146	4	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_6909_21	chr11	-	5205	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	8	8	-3	-8	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCATCCATTCCTCTT	NA	False	NA	-8	True	AATAAA	-14	NA	98915007	98883776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_69090_6	chr7	+	1248	11	NNC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	179.407357708651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	118	False	NA	33	True	AATAAA	-16	NA	126248487	126271951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_126248650_126260223_126260321_126261734_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
Isoform_69091_12	chr7	+	623	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	15	4	-15	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1163	False	NA	18	True	ATTAAA	-13	NA	126295159	126295865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126295272_126295354
Isoform_69093_550	chr7	+	363	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	537	366	0	-1	multi-exon	FALSE	canonical	3	2284	junction_2	148	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGGTCTCAGTGTG	1148	False	NA	17	True	ATTAAA	-12	NA	126295144	126295864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126295272_126295354_126295453_126295726
Isoform_69094_45	chr7	+	403	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	498	365	-32	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1109	False	NA	18	True	ATTAAA	-13	NA	126295105	126295865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126295272_126295354_126295453_126295726
Isoform_69097_86	chr7	+	1762	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	35	3	-15	-3	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGCCTCTGTCTGTG	5251	False	NA	28	True	TATAAA	-21	NA	126358807	126364988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
Isoform_691_5	chr10	-	1211	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-32	260	-9	-260	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGACTGGTTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	13744733	13528454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
Isoform_69100_5	chr7	+	1125	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	22	1	22	-1	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGTTCATGGAACAAGG	NA	False	NA	11	True	AATAAA	-17	NA	126365527	126374816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
Isoform_69101_77	chr7	+	955	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	12	6	-8	-3	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGCCCCTGGCTCACA	8233	False	NA	11	True	AATAAA	-12	NA	126376138	126379680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
Isoform_69102_9	chr7	+	917	4	NIC	ENSMUSG00000042675.16	novel	973	5	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	89.6449787897918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCCCTGGCTCACATG	8229	False	NA	13	True	AATAAA	-14	NA	126376134	126379682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_126376276_126376942_126377126_126377477_126377587_126379198
Isoform_69103_6	chr7	+	2388	11	FSM	ENSMUSG00000052301.15	ENSMUST00000064110.14	2538	11	147	3	2	-3	multi-exon	FALSE	canonical	1	1	junction_1	8.4829240241794	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGCTTGAGTTTGCT	818	False	NA	1	True	AATAAA	-12	NA	126446871	126451874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126447205_126447586_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
Isoform_69104_5	chr7	+	2523	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	-11	254	-11	205	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATTGGTCCCAAACCG	1465	False	NA	47	True	AATAAA	-21	NA	126461132	126464295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
Isoform_69105_21	chr7	+	2050	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	466	250	-1	209	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTCCCAAACCGTCAT	1942	False	NA	51	True	AATAAA	-25	NA	126461609	126464299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
Isoform_69107_72	chr7	+	1682	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGACTCTCGGGTGA	NA	False	NA	24	True	AATAAA	-16	NA	126528043	126544802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
Isoform_69108_4	chr7	+	1897	6	FSM	ENSMUSG00000030682.5	ENSMUST00000206346.2	806	6	-243	-848	-33	0	multi-exon	FALSE	canonical	1	15	junction_4	157.366578408505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575516	126579671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578476_126578576_126578706
Isoform_69109_7	chr7	+	2001	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	312	-339	-152	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTCAGAGCATGGT	NA	False	NA	24	True	NA	NA	NA	126575397	126579673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
Isoform_69110_177	chr7	+	1874	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	437	-337	-27	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575522	126579671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
Isoform_69115_101	chr7	+	1854	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	77	1	12	-1	multi-exon	FALSE	canonical	3	90	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTTGTATGACCTCT	NA	False	NA	5	True	NA	NA	NA	126690607	126693157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126690645_126691340
Isoform_69116_25	chr7	+	1885	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	40	7	-25	-7	multi-exon	FALSE	canonical	3	90	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATCCTTTTTGTATG	NA	False	NA	-1	True	NA	NA	NA	126690570	126693151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126690645_126691340
Isoform_69117_3	chr7	+	1981	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	15	-64	15	64	multi-exon	FALSE	canonical	3	90	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	70	True	NA	NA	NA	126690545	126693222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126690645_126691340
Isoform_69119_16	chr7	+	800	8	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_2	781.490099431979	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	219	False	NA	32	True	AATAAA	-24	NA	126808038	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_126808124_126808455_126808571_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69121_9	chr7	+	790	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	-33	9	-33	1	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCAATTTCAGTGTGT	2927	False	NA	33	True	AATAAA	-25	NA	126810746	126813461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69122_9	chr7	+	714	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	42	10	42	0	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	3002	False	NA	32	True	AATAAA	-24	NA	126810821	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69123_22	chr7	+	657	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	96	13	96	-2	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTGGCAATTTCAGT	3056	False	NA	29	True	AATAAA	-21	NA	126810875	126813457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69124_9	chr7	+	814	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-187	-1	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGGCAATTTCAGTG	3844	False	NA	30	True	AATAAA	-22	NA	126811663	126813458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69125_70	chr7	+	685	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	3975	False	NA	32	True	AATAAA	-24	NA	126811794	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69128_17	chr7	+	751	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1102	10	31	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4062	False	NA	32	True	AATAAA	-24	NA	126811881	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69130_98	chr7	+	573	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1491	10	-15	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4451	False	NA	32	True	AATAAA	-24	NA	126812270	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69131_241	chr7	+	488	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1576	10	70	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4536	False	NA	32	True	AATAAA	-24	NA	126812355	126813460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69132_9	chr7	+	653	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1409	12	-97	-1	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGGCAATTTCAGTG	4369	False	NA	30	True	AATAAA	-22	NA	126812188	126813458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69137_67	chr7	+	3033	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	172	137	-22	-1	multi-exon	FALSE	canonical	3	192	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGGTTATGTGT	8280	False	NA	27	True	AATAAA	-17	NA	126832404	126837214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832659_126834435
Isoform_69139_3	chr7	+	3395	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-41	-12	-41	12	multi-exon	FALSE	canonical	3	192	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAACTAAGCTGCTTTCA	8067	False	NA	12	True	AATAAA	-13	NA	126832191	126837363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832659_126834435
Isoform_69142_11	chr7	+	3215	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-11	138	-11	-2	multi-exon	FALSE	canonical	3	192	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGTGTGGTTATGTG	8097	False	NA	26	True	AATAAA	-16	NA	126832221	126837213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832659_126834435
Isoform_69143_8	chr7	+	3156	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	202	-16	8	16	multi-exon	FALSE	canonical	3	192	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCTGCTTTCATTGG	8310	False	NA	16	True	AATAAA	-17	NA	126832434	126837367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832659_126834435
Isoform_69145_10	chr7	+	3024	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	17	2	17	-2	multi-exon	FALSE	canonical	3	35	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGTGTGGTTATGTG	8319	False	NA	26	True	AATAAA	-16	NA	126832443	126837213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832690_126834435
Isoform_69147_4	chr7	+	3058	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	-16	1	-16	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGGTTATGTGT	8286	False	NA	27	True	AATAAA	-17	NA	126832410	126837214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832690_126834435
Isoform_69150_76	chr7	+	1219	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	269	-4	269	4	multi-exon	FALSE	canonical	3	88	junction_1	20	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCCTGTAAGTGAGGTG	NA	False	NA	35	True	AATAAA	-20	NA	126843714	126853979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126843781_126844156_126844307_126852976
Isoform_69152_10	chr7	+	2289	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	65.961797107765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070188	127075929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127070292_127070876_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69154_84	chr7	+	2089	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	646	1	-2	0	3prime_fragment	FALSE	canonical	3	60	junction_1	50.8389126685683	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070188	127075930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69155_7	chr7	+	2027	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_11	69.1986002820269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070189	127075929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
Isoform_69156_8	chr7	+	2019	11	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	68.5448758113982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070185	127075929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127070292_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69157_8	chr7	+	2507	10	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-18	3	-18	0	intron_retention	FALSE	canonical	3	203	junction_3	16.1229841308596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTCTGACTCCTTTG	NA	False	NA	5	True	TATAAA	-10	NA	127070643	127075927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393
Isoform_69158_395	chr7	+	2396	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	6	0	6	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070667	127075930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69160_48	chr7	+	2526	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-126	2	-85	-1	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGACTCCTTTGT	NA	False	NA	6	True	TATAAA	-11	NA	127070535	127075928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69162_18	chr7	+	2621	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-217	-2	-176	1	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACTCCTTTGTGCCT	NA	False	NA	10	True	TATAAA	-15	NA	127070444	127075932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
Isoform_69164_15	chr7	+	2342	11	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_10	56.3490017657811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070660	127075929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
Isoform_69168_7	chr7	+	1629	4	ISM	ENSMUSG00000053877.13	ENSMUST00000189136.7	1960	6	2	2299	2	569	5prime_fragment	FALSE	canonical	3	58	junction_2	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	127111175	127119710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752
Isoform_69171_3	chr7	+	2459	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	36	409	-8	-409	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTTTAGAGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	127111190	127125803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
Isoform_69172_12	chr7	+	2007	10	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_9	13.2282899242868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTTATTGAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	127111198	127128494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
Isoform_69173_13	chr7	+	2010	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	36	2	-8	-2	multi-exon	FALSE	canonical	3	18	junction_9	13.723009424114	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTTCAGTTATTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	127111190	127128492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
Isoform_69174_4	chr7	+	1881	10	NIC	ENSMUSG00000053877.13	novel	4025	21	NA	NA	-16	7	intron_retention	FALSE	canonical	2	5	junction_1	18.742570544546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGAGTATTATGTGCT	NA	False	NA	NA	False	AATAAA	-26	NA	127111620	127128501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
Isoform_69175_6	chr7	+	1940	3	FSM	ENSMUSG00000030815.12	ENSMUST00000151908.8	1918	3	-21	-1	3	1	multi-exon	FALSE	canonical	3	119	junction_1	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127172554	127178459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127172629_127173025_127173139_127176706
Isoform_69176_9	chr7	+	1558	10	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.5313724991294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGTCTGCTGTCTAG	NA	False	NA	25	True	AATAAA	-26	NA	127172522	127182478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69177_9	chr7	+	1515	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172511	127182479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69178_19	chr7	+	1507	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.180492401225	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172554	127182472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127172629_127173025_127173139_127176706_127176861_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69179_31	chr7	+	1586	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-21	5	3	2	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCCATGTCTGCTGT	NA	False	NA	21	True	AATAAA	-22	NA	127172554	127182474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69181_4	chr7	+	1855	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	65	junction_3	23.0475052879916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172554	127182479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127172629_127173025_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69182_4	chr7	+	1758	9	FSM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	77	5	23	0	multi-exon	FALSE	canonical	3	46	junction_2	32.8954309137303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172777	127182472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
Isoform_69184_310	chr7	+	4075	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	-2	1206	-2	-1	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCCGTCCATTTGGT	NA	False	NA	20	True	AATAAA	-21	NA	127187936	127202765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
Isoform_69185_6	chr7	+	4157	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	-4	intron_retention	FALSE	canonical	3	259	junction_5	49.6009072497671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAAGCCCGTCCATTT	NA	False	NA	17	True	AATAAA	-18	NA	127187938	127202762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
Isoform_69191_8	chr7	+	1368	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	-22	6	-22	-6	multi-exon	FALSE	canonical	3	6	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTTGTTCCATGTGG	NA	False	NA	NA	False	AATAAA	-31	NA	127311885	127317358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127311952_127313096_127313216_127316175
Isoform_69192_3	chr7	+	2762	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	30	-7	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	36.3209306048179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTACTGAAGTGTTA	574	False	NA	4	True	NA	NA	NA	127344987	127367892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69194_6	chr7	+	3662	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.2511653931107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	566	False	NA	15	True	TATAAA	-19	NA	127344979	127368655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69197_7	chr7	+	4090	11	NIC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-254	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1279	False	NA	15	True	TATAAA	-19	NA	127345692	127368655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_692_3	chr10	-	2062	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-30	147963	-7	-2267	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCAGTTCCTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	13744731	13676157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_13677694_13704986_13705143_13744361
Isoform_69201_12	chr7	+	3663	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-245	-8	-245	8	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCTTCCCATTCTT	1288	False	NA	12	True	NA	NA	NA	127345701	127368108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69202_6	chr7	+	3922	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-511	-1	478	1	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCAGTTTGGCTCTTCC	1022	False	NA	5	True	NA	NA	NA	127345435	127368101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69203_8	chr7	+	4215	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-252	-553	-252	-2	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	1281	False	NA	13	True	TATAAA	-17	NA	127345694	127368653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69208_4	chr7	+	3575	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	-126	0	1	0	multi-exon	FALSE	canonical	3	25	junction_5	29.4282974593846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2906	False	NA	15	True	TATAAA	-19	NA	127347319	127368655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_6921_193	chr11	-	3317	24	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-1	9931	-1	751	5prime_fragment	FALSE	canonical	3	1327	junction_15	151.311843892272	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTAAAGATCTACTAAA	NA	False	NA	NA	False	AATAGA	-18	NA	98915016	98893699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
Isoform_69211_6	chr7	+	3701	10	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	1374	-553	2	-2	3prime_fragment	FALSE	canonical	3	52	junction_5	24.111367126137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	2907	False	NA	13	True	TATAAA	-17	NA	127347320	127368653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69212_3	chr7	+	2849	9	FSM	ENSMUSG00000030811.15	ENSMUST00000188580.3	2601	9	-47	-201	-47	0	multi-exon	FALSE	canonical	2	12	junction_3	39.2681088798531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	2858	False	NA	4	True	NA	NA	NA	127347271	127368100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69213_4	chr7	+	2965	9	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-31	3	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	35.611620294505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTTTGGCTCTTCCCA	2874	False	NA	7	True	NA	NA	NA	127347287	127368103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69214_4	chr7	+	3542	9	NIC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	35.611620294505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2849	False	NA	15	True	TATAAA	-19	NA	127347262	127368655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
Isoform_69216_9	chr7	+	2067	2	ISM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	19054	1	19054	-1	3prime_fragment	FALSE	canonical	3	128	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGACTTTTTGTGTC	NA	False	NA	14	True	TATAAA	-18	NA	127366499	127368654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127366836_127366923
Isoform_69217_17	chr7	+	1997	3	FSM	ENSMUSG00000043964.15	ENSMUST00000121504.2	2141	3	2	142	2	-142	multi-exon	FALSE	canonical	0	0	junction_2	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTATGGCTATGAATG	NA	False	NA	15	True	AATAAA	-15	NA	127368988	127374180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127369389_127369905_127370051_127372728
Isoform_69218_166	chr7	+	1822	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	30	144	30	-144	multi-exon	FALSE	canonical	3	68	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCCTATGGCTATGAA	NA	False	NA	13	True	AATAAA	-13	NA	127369016	127374178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127369389_127372728
Isoform_69220_3	chr7	+	1994	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	17	-15	17	15	multi-exon	FALSE	canonical	3	68	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGGCCTCTGAACTCT	NA	False	NA	NA	False	GATAAA	-30	NA	127369003	127374337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127369389_127372728
Isoform_69221_3	chr7	+	2317	2	FSM	ENSMUSG00000030811.15_ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	-464	143	-464	-143	multi-exon	FALSE	canonical	3	68	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCTATGGCTATGAAT	NA	False	NA	14	True	AATAAA	-14	NA	127368522	127374179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127369389_127372728
Isoform_69222_3	chr7	+	2470	7	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	14082	0	12894	0	3prime_fragment	TRUE	canonical	3	35	junction_1	7.97913946905722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGCTTGGTCAGTA	NA	False	NA	10	True	ATTAAA	-10	NA	127390642	127399287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
Isoform_69223_4	chr7	+	2838	2	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	-1	2	-1	-2	intron_retention	FALSE	canonical	3	91	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCTACCTTTTACC	1883	False	NA	12	True	AATAAA	-13	NA	127399774	127402972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127399887_127400246
Isoform_69224_8	chr7	+	2177	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	37	1	-5	-1	intron_retention	FALSE	canonical	3	82	junction_2	5.54977477020464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1921	False	NA	13	True	AATAAA	-14	NA	127399812	127402973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407
Isoform_69225_24	chr7	+	1828	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	-1	1	-1	-1	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1883	False	NA	13	True	AATAAA	-14	NA	127399774	127402973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
Isoform_69226_24	chr7	+	1775	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	54	-1	0	1	multi-exon	FALSE	canonical	3	65	junction_6	10.2794292967395	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACCTTTTACCCAA	1938	False	NA	15	True	AATAAA	-16	NA	127399829	127402975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
Isoform_69227_5	chr7	+	2657	3	NIC	ENSMUSG00000042289.12	novel	2286	5	NA	NA	5	-1	intron_retention	FALSE	canonical	3	91	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTACCTTTTACCC	1943	False	NA	13	True	AATAAA	-14	NA	127399834	127402973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127399887_127400246_127401286_127401407
Isoform_69229_3	chr7	+	1497	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	-52	11	-52	8	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTTGGAGCCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	127440883	127448180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
Isoform_69231_5	chr7	+	5324	2	ISM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	1441	7	-169	-3	3prime_fragment	FALSE	canonical	3	153	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACAGCTACTGGTGTGG	82	False	NA	13	True	AAAACA	-12	NA	127478313	127485161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127483091_127484614
Isoform_69237_8	chr7	+	3618	2	ISM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	3147	7	1537	-3	3prime_fragment	FALSE	canonical	3	153	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACAGCTACTGGTGTGG	161	False	NA	13	True	AAAACA	-12	NA	127480019	127485161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127483091_127484614
Isoform_69239_11	chr7	+	2829	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	10	566	10	-566	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127503263	127508827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
Isoform_69240_510	chr7	+	1794	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	9	1602	9	11	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTTGGGAGGGCAGGC	NA	False	NA	39	True	ATTAAA	-31	NA	127503262	127507791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
Isoform_69245_80	chr7	+	1502	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	1	76	1	-76	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGGAGGTACGCAGAG	NA	False	NA	16	True	AGTAAA	-17	NA	127511688	127524933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
Isoform_69247_7	chr7	+	1568	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	7	4	7	-4	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGATTCCTCGCTC	NA	False	NA	88	True	NA	NA	NA	127511694	127525005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
Isoform_69249_12	chr7	+	2356	6	FSM	ENSMUSG00000030795.19	ENSMUST00000174196.8	2374	6	-4	22	-3	-22	multi-exon	FALSE	canonical	3	619	junction_3	88.8603398598047	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACCCAAAAAAAA	1180	False	NA	NA	False	AAAACA	-25	NA	127566658	127573477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725
Isoform_69252_306	chr7	+	1831	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	34	3671	0	1	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTTTCCCCCAGTTT	1184	False	NA	35	True	ATTAAA	-18	NA	127566662	127581202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
Isoform_69255_5	chr7	+	2353	6	ISM	ENSMUSG00000030795.19	ENSMUST00000128851.8	4909	13	0	7720	0	-18	5prime_fragment	FALSE	canonical	3	245	junction_3	237.982856525423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCCAAAAAAAACCAA	1184	False	NA	NA	False	AAAACA	-29	NA	127566662	127573481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725
Isoform_69257_114	chr7	+	1830	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	-1	2	-1	1	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTTTCCCCCAGTTT	1182	False	NA	35	True	ATTAAA	-18	NA	127566660	127581202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
Isoform_69264_168	chr7	+	3080	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	755	-1	755	1	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGGGTCGTCTGT	NA	False	NA	11	True	ATTAAA	-22	NA	127837283	127844273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_69267_18	chr7	+	3876	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	-43	1	-28	-1	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGGTCGTCT	NA	False	NA	9	True	ATTAAA	-20	NA	127836485	127844271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_69269_8	chr7	+	2596	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	741	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	39.1942278913618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837269	127844272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127842511_127842645_127843196
Isoform_69272_4	chr7	+	983	4	ISM	ENSMUSG00000030781.14	ENSMUST00000118169.8	2277	14	5104	3	206	-3	3prime_fragment	FALSE	canonical	1	3	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTGTTGTGGCTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	127869951	127871599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127870125_127870206_127870423_127870920_127871051_127871135
Isoform_69274_88	chr7	+	2593	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-34	3	-34	-3	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTTTTGTGGTTTC	7108	False	NA	14	True	AATAAA	-19	NA	128125305	128148702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
Isoform_69277_13	chr7	+	646	4	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	57	7864	25	-4813	5prime_fragment	FALSE	canonical	3	55	junction_3	6.16441400296898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTAAGACTTTGA	7201	False	NA	NA	False	NA	NA	NA	128213108	128265482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361
Isoform_69278_11	chr7	+	4599	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-19	154	13	-3	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCAGCGTATGAGAAT	7157	False	NA	12	True	ATTAAA	-18	NA	128213064	128297995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
Isoform_69280_32	chr7	+	3439	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	17	1049	17	-1049	multi-exon	FALSE	canonical	3	121	junction_10	14.275615919341	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAATATGTTATTTT	1948	False	NA	31	True	ATTAAA	-19	NA	128346683	128385511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
Isoform_69281_3	chr7	+	3693	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	-32	844	-32	-844	multi-exon	TRUE	canonical	3	121	junction_10	14.275615919341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAGAAACAAAAAAAAAAGA	1899	False	NA	NA	False	NA	NA	NA	128346634	128385716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
Isoform_69283_3	chr7	+	2691	20	ISM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	45	7625	0	2473	5prime_fragment	FALSE	canonical	3	127	junction_9	16.0109034870276	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTACTTCATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	129193631	129229837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728
Isoform_69286_36	chr7	+	3814	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-107	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247852	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69289_18	chr7	+	3999	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247667	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69290_14	chr7	+	4022	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-14	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247644	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69291_4	chr7	+	3976	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-48	-3	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGGAAAAAAAAAAAAAAAG	NA	False	NA	-50	True	NA	NA	NA	130247610	130366435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69294_4	chr7	+	3541	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-49	0	intron_retention	FALSE	canonical	1	2	junction_2	86.111142652324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAT	NA	False	NA	-47	True	NA	NA	NA	130247910	130366438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69296_15	chr7	+	3903	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130247634	130366512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69299_16	chr7	+	3821	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-16	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAT	NA	False	NA	-47	True	NA	NA	NA	130247642	130366438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_693_3	chr10	-	2161	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-29	147863	-6	-2167	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAATAAAATATAATAAG	NA	False	NA	NA	False	NA	NA	NA	13744730	13676057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_13677694_13704986_13705143_13744361
Isoform_69300_20	chr7	+	3587	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247953	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69304_28	chr7	+	3491	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-26	-1	-26	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294468	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69306_13	chr7	+	3715	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-250	-1	-41	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294244	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69309_9	chr7	+	3299	14	ISM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	23881	-1	2969	0	3prime_fragment	FALSE	canonical	3	244	junction_1	32.4111895354149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130318375	130366515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69311_17	chr7	+	3534	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467616	130515037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_69312_8	chr7	+	3753	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-39	173	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTCAGATCCTTGAA	NA	False	NA	3	True	AATAAA	-11	NA	130467575	130515215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_69314_4	chr7	+	3568	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-27	-1240	-14	-4	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467600	130515038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_69315_4	chr7	+	3735	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-7	171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	79.7455589150058	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTTCAGATCCTTG	NA	False	NA	1	True	AATAAA	-9	NA	130467607	130515213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507121_130507185_130510065_130510156_130511317_130511359_130512561
Isoform_69317_151	chr7	+	2058	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	-19	2	-19	-2	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGCGTGCTTCTTTT	6603	False	NA	17	True	ATTAAA	-18	NA	130537913	130587388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
Isoform_69318_93	chr7	+	1116	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	17	2	1	1	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGATTTGGATAAAT	NA	False	NA	20	True	ATTAAA	-20	NA	130972886	130989566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
Isoform_69320_3	chr7	+	910	6	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	89.7226838653414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGATTTGGATAAAT	NA	False	NA	20	True	ATTAAA	-20	NA	130972863	130989566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130986527_130986594_130989346
Isoform_69321_41	chr7	+	820	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCTGATTTGGATAAA	NA	False	NA	19	True	ATTAAA	-19	NA	130972886	130989565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
Isoform_69323_37	chr7	+	3298	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	45	2738	45	-3	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGAATTCTCCCTTTTT	NA	False	NA	18	True	AATAAA	-22	NA	131012374	131047935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
Isoform_69327_13	chr7	+	833	2	FSM	ENSMUSG00000066979.7	ENSMUST00000208848.2	832	2	0	-1	0	1	multi-exon	FALSE	canonical	3	1386	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	131162119	131163207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_131162184_131162438
Isoform_69328_14	chr7	+	1408	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	720	0	11	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGGTGTTTGTAAACA	NA	False	NA	27	True	AATAAA	-22	NA	131162108	131172904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_69330_476	chr7	+	1331	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	169	718	0	10	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTGTTTGTAAAC	NA	False	NA	26	True	AATAAA	-21	NA	131162119	131172903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_69331_86	chr7	+	2052	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	169	-3	0	0	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162119	131173624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
Isoform_69338_109	chr7	+	1601	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	11	0	11	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212378	132308149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_69340_9	chr7	+	1930	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	11	-329	11	329	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132212378	132308478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_69342_5	chr7	+	1511	6	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	7	1	combination_of_known_junctions	TRUE	canonical	2	20	junction_5	121.921942241747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGACTCAGCCTTTCT	NA	False	NA	10	True	AATAAA	-18	NA	132212374	132308147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320
Isoform_69343_13	chr7	+	1213	5	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	131.685942681822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212421	132308146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_132212560_132243252_132243317_132244215_132244309_132251986_132252079_132307320
Isoform_69346_170	chr7	+	2862	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	27	3	3	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACGATATTTTAGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	132460980	132486837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
Isoform_69347_15	chr7	+	2827	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	1	-1	1	-1	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGATATTTTAGTGTCT	NA	False	NA	14	True	AATAAA	-16	NA	132460978	132486838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
Isoform_69349_7	chr7	+	2728	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	49	2231	49	164	multi-exon	TRUE	canonical	3	56	junction_1	22.7129157795708	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132532919	132585889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
Isoform_69350_25	chr7	+	4478	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	151	795	1	-3	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTTGGTAGTTCCCA	NA	False	NA	3	True	AATAAA	-16	NA	133239422	133273905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
Isoform_69351_5	chr7	+	4474	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_24	36.1270664537761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTTGGTAGTTCCCA	NA	False	NA	3	True	AATAAA	-16	NA	133239423	133273905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
Isoform_69353_1573	chr7	+	1230	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	8	6	-7	-6	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	1573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATACTTGAAGTGTTC	1315	False	NA	17	True	AATAAA	-18	NA	133311069	133322868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
Isoform_69359_7	chr7	+	2592	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	17	-20	13	20	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGGGTTTTTCTTAG	NA	False	NA	27	True	NA	NA	NA	134272432	134384935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
Isoform_6936_25	chr11	-	612	3	FSM	ENSMUSG00000020914.18	ENSMUST00000129777.2	632	3	-3	23	-3	-23	multi-exon	FALSE	canonical	3	1518	junction_2	50	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98915007	98912933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_98913257_98913665_98913819_98914871
Isoform_69360_10	chr7	+	3712	35	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	12	64777	8	-64777	5prime_fragment	FALSE	canonical	3	101	junction_11	18.9351698550461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCGAAACCTTAATTAA	NA	False	NA	NA	False	AAAACA	-36	NA	134272427	134710591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434
Isoform_69361_3	chr7	+	4436	43	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	7	33282	3	-33282	5prime_fragment	FALSE	canonical	3	98	junction_42	18.0855237082163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAGAGAAAAACCCAG	NA	False	NA	NA	False	NA	NA	NA	134272422	134742086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035
Isoform_69362_30	chr7	+	847	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	-34	2081	-34	-2081	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496308	136729914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
Isoform_69363_4	chr7	+	980	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-9	-2080	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGATGTGGCTGCCCTT	NA	False	NA	31	True	ATTAAA	-22	NA	136496333	136729915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
Isoform_69369_1016	chr7	+	1228	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	46	411	4	-411	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTGCGTGTAGAAT	NA	False	NA	30	True	AATAAA	-18	NA	137039388	137069912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
Isoform_69371_68	chr7	+	1315	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	-41	411	-41	-411	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTGCGTGTAGAAT	NA	False	NA	30	True	AATAAA	-18	NA	137039301	137069912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
Isoform_69377_7	chr7	+	657	3	FSM	ENSMUSG00000041769.14	ENSMUST00000128157.2	3823	3	285	2881	5	-963	multi-exon	FALSE	canonical	3	549	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATTTGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	138448092	138470550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138448245_138448340_138448434_138470138
Isoform_69380_152	chr7	+	2074	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	5	2	5	1	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCACTGCAGTCTTTAT	NA	False	NA	18	True	AATAAA	-32	NA	138448092	138484784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_69381_5	chr7	+	2122	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	48	-89	21	89	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAGCAAAATGGTCAAG	NA	False	NA	109	True	AATAAA	-23	NA	138448135	138484875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_69385_8	chr7	+	1898	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCACTGCAGTCTTTAT	NA	False	NA	18	True	AATAAA	-32	NA	138448102	138484784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
Isoform_69388_21	chr7	+	2606	14	FSM	ENSMUSG00000025478.16	ENSMUST00000026551.15	3552	14	11	935	10	-8	multi-exon	FALSE	canonical	1	1	junction_6	3.36181128975572	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	138665927	138681685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138666078_138669425_138669515_138670074_138670260_138671777_138671943_138673521_138673584_138673676_138673758_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
Isoform_69389_113	chr7	+	2271	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-27	813	-27	1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828370	138847078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_69390_17	chr7	+	2345	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	0	712	0	102	multi-exon	FALSE	canonical	3	49	junction_2	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCACCTGCCTGACCT	NA	False	NA	NA	False	AATAAA	-38	NA	138828397	138847179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_69391_5	chr7	+	2577	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-333	813	-333	1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828064	138847078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138828560_138834685_138836077_138846387
Isoform_69392_77	chr7	+	2559	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-15	-1	-10	1	multi-exon	FALSE	canonical	3	21	junction_2	19.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138828387	138847078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138828560_138834685_138836382_138846387
Isoform_69393_8	chr7	+	2655	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-21	-91	-16	91	multi-exon	FALSE	canonical	3	21	junction_2	19.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTTCAAAGCTGCAC	NA	False	NA	NA	False	AATAAA	-27	NA	138828381	138847168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138828560_138834685_138836382_138846387
Isoform_69394_49	chr7	+	2844	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-23	5	-23	-5	multi-exon	TRUE	canonical	3	132	junction_13	16.0850517216728	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGCTGCTTAT	NA	False	NA	14	True	AATAAA	-15	NA	138969001	139159563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
Isoform_69395_789	chr7	+	1193	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	33	1	33	-1	multi-exon	FALSE	canonical	3	805	junction_1	0	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGAATGAATTCGGA	NA	False	NA	NA	False	AATAAA	-19	NA	139523734	139525024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139524343_139524439
Isoform_69396_64	chr7	+	1249	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	-23	1	-23	-1	multi-exon	FALSE	canonical	3	805	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGAATGAATTCGGA	NA	False	NA	NA	False	AATAAA	-19	NA	139523678	139525024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139524343_139524439
Isoform_69398_3	chr7	+	1868	5	FSM	ENSMUSG00000025470.12	ENSMUST00000210882.2	1757	5	-111	0	5	0	multi-exon	FALSE	canonical	3	304	junction_1	31.3318926973779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616329	139620515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238
Isoform_69399_192	chr7	+	1077	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	-2	1	-2	-1	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616322	139620514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_6940_306	chr11	-	1948	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	13	958	13	-13	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121830	99100830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_69401_5	chr7	+	1119	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	132.693029206511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616327	139620514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619406_139620155
Isoform_69402_5	chr7	+	998	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616327	139620514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
Isoform_69404_10	chr7	+	617	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	0	3	0	-3	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGAATGCGTGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	139673307	139677110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
Isoform_69405_223	chr7	+	1738	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	27	2890	-24	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_69406_5	chr7	+	3212	7	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	89.1099508098469	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAGTACTTCTCATTTT	NA	False	NA	28	True	CATAAA	-20	NA	139705578	139714253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139711673_139712293_139712452_139713922
Isoform_69407_3	chr7	+	1847	8	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	108.982117986468	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139710219_139711559_139711673_139712293_139712452_139713922
Isoform_69408_4	chr7	+	2456	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	3	2	intron_retention	FALSE	canonical	3	226	junction_1	21.2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTAGAGTACTTCTCA	NA	False	NA	24	True	CATAAA	-16	NA	139705572	139714249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139705796_139706238_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_69409_3	chr7	+	2145	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	9	-3	intron_retention	FALSE	canonical	3	213	junction_1	25.4165300542777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTTGTGTAGAGTACT	NA	False	NA	19	True	CATAAA	-11	NA	139705629	139714244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_6941_158	chr11	-	2355	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	562	2	-9	-2	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCAGTGTTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	99121281	99099874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_69410_3	chr7	+	1918	6	ISM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	288	2892	237	-2	3prime_fragment	FALSE	canonical	3	213	junction_1	25.4165300542777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTGTGTAGAGTACTT	NA	False	NA	20	True	CATAAA	-12	NA	139705857	139714245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_69411_5	chr7	+	2873	5	NIC	ENSMUSG00000025464.16	novel	1024	5	NA	NA	-24	0	intron_retention	FALSE	canonical	3	250	junction_4	15.1554445662277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
Isoform_69412_102	chr7	+	1348	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	68	179	-17	160	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATCTCTCTCTGGC	NA	False	NA	22	True	AATAAA	-23	NA	139717544	139730520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
Isoform_69413_43	chr7	+	1374	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	42	179	42	160	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATCTCTCTCTGGC	NA	False	NA	22	True	AATAAA	-23	NA	139717518	139730520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
Isoform_69414_38	chr7	+	679	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	123	-83	123	4	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAACCTATCATTGGGA	NA	False	NA	31	True	AATAAA	-21	NA	140415053	140417883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
Isoform_69417_29	chr7	+	3295	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	-476	587	-476	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140436393	140443056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_69418_398	chr7	+	2356	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	463	587	-2	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437332	140443056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_69419_120	chr7	+	2380	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	439	587	-26	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437308	140443056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_6942_78	chr11	-	2829	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	88	2	88	-2	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCAGTGTTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	99121755	99099874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_69421_15	chr7	+	3328	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	-509	587	-509	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140436360	140443056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_69428_13	chr7	+	2647	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	213	junction_1	24.9446261747896	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437331	140443056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
Isoform_6943_348	chr11	-	1412	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	549	958	-22	-13	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121294	99100830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
Isoform_69431_9	chr7	+	2137	11	FSM	ENSMUSG00000025487.16	ENSMUST00000151644.8	1391	11	-14	-732	-14	1	multi-exon	FALSE	canonical	3	1065	junction_10	119.9970416302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCTTCTGTTCTTTG	NA	False	NA	30	True	AATAAA	-18	NA	140462312	140478557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329
Isoform_69432_843	chr7	+	1541	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	449	-1	3	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCTTCTGTTCTTT	NA	False	NA	29	True	AATAAA	-17	NA	140462329	140478556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
Isoform_69433_16	chr7	+	2025	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	-36	0	-36	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140461844	140478555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
Isoform_69435_111	chr7	+	2966	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	10	5	10	1	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGTGTGTGATGGAT	NA	False	NA	10	True	ATTAAA	-22	NA	140521503	140527572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_69436_8	chr7	+	3118	13	FSM	ENSMUSG00000062031.14	ENSMUST00000169736.8	3145	13	25	2	10	0	multi-exon	FALSE	canonical	3	42	junction_1	11.7505910016854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521503	140527569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_69437_3	chr7	+	2676	13	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.5930826795808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGTCAGAGTGT	NA	False	NA	1	True	ATTAAA	-13	NA	140521503	140527563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140521557_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
Isoform_69441_173	chr7	+	658	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	81	-3	81	3	multi-exon	FALSE	canonical	3	1139	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCCTGTGTTGAGTTCG	NA	False	NA	27	True	AATAAA	-31	NA	140548033	140549741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140548352_140549401
Isoform_69442_14	chr7	+	702	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	33	1	33	-1	multi-exon	FALSE	canonical	3	1139	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTAGTCCTGTGTTGAG	NA	False	NA	23	True	AATAAA	-27	NA	140547985	140549737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140548352_140549401
Isoform_69443_34	chr7	+	2637	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-123	3484	-123	-1936	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGACTTCATCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	140640893	140648829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
Isoform_69447_86	chr7	+	3679	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-123	0	-123	0	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640893	140652313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_69453_5	chr7	+	1303	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5811	0	30	0	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140650217	140652313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_69454_8	chr7	+	1226	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5879	9	98	-9	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGACTTGTTTTCTG	NA	False	NA	15	True	AATGAA	-16	NA	140650285	140652304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_69456_3	chr7	+	3008	14	FSM	ENSMUSG00000054065.13	ENSMUST00000106039.9	2919	14	-86	-3	-86	3	multi-exon	TRUE	canonical	0	0	junction_4	30.8055554814503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCCGTGTGTTTCCGT	NA	False	NA	22	True	ATTAAA	-20	NA	140658044	140670426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140658348_140659818_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_69457_51	chr7	+	1430	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-1	-4	-1	1	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCCGTGTGTTTCC	613	False	NA	20	True	ATTAAA	-18	NA	140668057	140670424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
Isoform_69461_541	chr7	+	2139	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	35	1450	20	554	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTCTGGCTGCCCTTTG	6845	False	NA	13	True	AATAAA	-18	NA	140711233	140736069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
Isoform_69462_8	chr7	+	3582	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	43	-1	-15	1	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAAGTTGGTTGT	6853	False	NA	NA	False	NA	NA	NA	140711241	140737520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
Isoform_69463_13	chr7	+	2010	12	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	20	552	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	88.9139243899021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6845	False	NA	11	True	AATAAA	-16	NA	140711233	140736067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734850_140734910_140735246
Isoform_69466_28	chr7	+	2546	13	FSM	ENSMUSG00000038637.16	ENSMUST00000070458.11	2502	13	-43	-1	-24	1	multi-exon	FALSE	canonical	3	14	junction_2	5.23609269080167	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCCTGGCCTGGCTG	373	False	NA	11	True	AATAAA	-15	NA	140774045	140789963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_69467_8	chr7	+	2214	13	FSM	ENSMUSG00000038637.16	ENSMUST00000047093.11	2197	13	-12	-5	-12	3	multi-exon	FALSE	canonical	1	3	junction_1	6.88597608670453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGCCTGGCTGAC	1306	False	NA	13	True	AATAAA	-17	NA	140774978	140789965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140775130_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_69468_5	chr7	+	2250	13	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.90920701180312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	1307	False	NA	16	True	AATAAA	-20	NA	140774979	140789968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140775130_140775820_140775926_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_69469_5	chr7	+	1861	3	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	4	6	4	-3	intron_retention	FALSE	canonical	3	288	junction_1	28.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTCAGTGTGTCCT	NA	False	NA	14	True	AATAAA	-11	NA	140795776	140798565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_140795854_140796633_140796765_140796912
Isoform_69470_343	chr7	+	1512	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	13	0	-2	0	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795785	140798571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_69472_9	chr7	+	1590	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-29	-1	5	1	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGTGTGTCCTGAGG	NA	False	NA	18	True	AATAAA	-15	NA	140795777	140798569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
Isoform_69473_9	chr7	+	1441	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	127.53258407168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGTGTGTCCTGAGGT	NA	False	NA	19	True	AATAAA	-16	NA	140795826	140798570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140795854_140796633_140796765_140796941_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_69474_9	chr7	+	1513	6	NIC	ENSMUSG00000038618.13	novel	661	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	122.763186664407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140796103	140798571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140796173_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_69475_6	chr7	+	2254	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	329	junction_4	8.98262211161084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795823	140798571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
Isoform_69480_6	chr7	+	5424	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	49.6786907872893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808694	140842663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_69481_39	chr7	+	5382	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-15	-119	-10	-2	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTATGGACTGATG	NA	False	NA	79	True	NA	NA	NA	140808686	140842658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_69482_12	chr7	+	5305	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_15	49.6653158513657	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTTCTATGGACTGA	NA	False	NA	77	True	NA	NA	NA	140808686	140842656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
Isoform_69484_7	chr7	+	5365	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	49.8347442062644	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTATGGACTGATG	NA	False	NA	79	True	NA	NA	NA	140808700	140842658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
Isoform_69486_99	chr7	+	3089	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	101	1	1	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918893	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69487_13	chr7	+	3196	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	-6	1	-6	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918786	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69490_3	chr7	+	3497	21	NNC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	-114	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	21.1969337405201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918678	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937270_140937302_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69491_3	chr7	+	3376	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	-36	1	-36	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918832	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69492_10	chr7	+	3298	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	42	1	-6	-1	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918910	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69493_3	chr7	+	2515	21	NNC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	-7	-399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.1969337405201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	140918909	140942181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937270_140937302_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69494_4	chr7	+	3021	20	NIC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	20.8853883369062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140918905	140942932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140918972_140921805_140921888_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
Isoform_69497_2437	chr7	+	1227	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	0	2	0	0	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	2437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTTCATTTCACCG	3840	False	NA	16	True	ATTAAA	-15	NA	140972111	140982879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
Isoform_69499_3626	chr7	+	448	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	281	235	-18	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	3626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2398	False	NA	27	True	AATAAA	-20	NA	141027563	141031263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
Isoform_695_9	chr10	-	5166	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-209	248	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGACATTCC	NA	False	NA	-13	True	NA	NA	NA	14421132	14280057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_6950_14	chr11	-	1310	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-25	-13	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121297	99100830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
Isoform_69500_224	chr7	+	485	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	244	235	-17	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2361	False	NA	27	True	AATAAA	-20	NA	141027526	141031263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
Isoform_69511_142	chr7	+	1960	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	9	656	0	-5	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGCCTTCCTCACTTC	9954	False	NA	12	True	AATAAA	-13	NA	141035119	141040000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
Isoform_69512_70	chr7	+	2005	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	-23	643	-23	-3	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCTGCATGTTACCCT	9922	False	NA	25	True	AATAAA	-26	NA	141035087	141040013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
Isoform_69513_9	chr7	+	1623	10	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.21929723245501	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTTGGCTCTTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	141041823	141046524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_69514_4	chr7	+	1059	4	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	4011	0	11	0	3prime_fragment	FALSE	canonical	3	11	junction_3	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141045017	141046526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_141045270_141045431_141045599_141045678_141045751_141045958
Isoform_69515_165	chr7	+	1743	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-20	-15	9	5	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTTGCTGACAGGA	NA	False	NA	13	True	NA	NA	NA	141047314	141051391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_69516_51	chr7	+	1772	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-47	-17	-17	7	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTGCTGACAGGACC	NA	False	NA	15	True	NA	NA	NA	141047287	141051393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_69517_123	chr7	+	1872	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-4	-3	-3	3	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATCAGCTTGCTGACAG	NA	False	NA	11	True	NA	NA	NA	141047301	141051389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_69519_31	chr7	+	1631	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	-4	-8	-4	7	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTGCTGACAGGACC	706	False	NA	15	True	NA	NA	NA	141048730	141051393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
Isoform_69521_38	chr7	+	1418	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	47	1	47	-1	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGAAGTTCTTTCATT	3538	False	NA	44	True	NA	NA	NA	141055199	141073339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_69522_18	chr7	+	1468	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	-7	5	-7	1	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTGAGGAAGTTCTTT	3484	False	NA	40	True	NA	NA	NA	141055145	141073335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_69523_3	chr7	+	1272	8	NIC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	85.0104435360979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGAAGTTCTTTCATT	3747	False	NA	44	True	NA	NA	NA	141055408	141073339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_141055474_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_69524_197	chr7	+	1609	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	17	-469	17	1	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTGAGGAAGTTCTTT	671	False	NA	40	True	NA	NA	NA	141061993	141073335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_69528_3	chr7	+	1575	6	NIC	ENSMUSG00000025511.16	novel	1157	7	NA	NA	-22	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.533442766411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGAGGAAGTTCTTTCA	632	False	NA	42	True	NA	NA	NA	141061954	141073337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_141062480_141069464_141069657_141071484_141071587_141071686_141071819_141071892_141071977_141072797
Isoform_69529_143	chr7	+	3219	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	66	1361	31	-1361	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAAGTGGAAATTTTGTT	9662	False	NA	35	True	ATTAAA	-19	NA	141142151	141211563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_69531_40	chr7	+	4579	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	59	8	24	-8	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAACATGTGTGTGGT	9655	False	NA	20	True	AATAAA	-14	NA	141142144	141212916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_69537_67	chr7	+	3226	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	29	-1359	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	117.945873284924	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGGAAATTTTGTTCA	9660	False	NA	37	True	ATTAAA	-21	NA	141142149	141211565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_69540_27	chr7	+	4573	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	33	-8	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	117.945873284924	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAACATGTGTGTGGT	9664	False	NA	20	True	AATAAA	-14	NA	141142153	141212916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
Isoform_69544_215	chr7	+	542	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	146	4	-3	-4	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTGGTGGACACTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	142086894	142094480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
Isoform_69545_1344	chr7	+	1478	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	50	5	-5	-5	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTGCCAGACCTCTT	NA	False	NA	37	True	AATAAA	-25	NA	142606525	142621666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
Isoform_69548_41	chr7	+	1508	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	20	5	20	-5	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTGCCAGACCTCTT	NA	False	NA	37	True	AATAAA	-25	NA	142606495	142621666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
Isoform_69557_9	chr7	+	1411	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	69	-1	13	1	intron_retention	FALSE	canonical	3	160	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTGTGGCTTTTTC	NA	False	NA	17	True	AATAAA	-16	NA	142623173	142624825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_142623251_142623491
Isoform_69558_5	chr7	+	1580	2	ISM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	17	7	17	-1	intron_retention	FALSE	canonical	3	160	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142623002	142624823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_142623251_142623491
Isoform_6956_13	chr11	-	583	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3228	6	-39	-6	3prime_fragment	FALSE	canonical	3	82	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATCTGTCAGAATTAT	8300	False	NA	NA	False	AATAAA	-32	NA	99276962	99276085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_99276463_99276756
Isoform_69560_7	chr7	+	1466	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	-100	-2	19	2	multi-exon	FALSE	canonical	3	124	junction_2	18	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142623004	142624826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_69561_33	chr7	+	1300	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	68	-4	12	-2	multi-exon	FALSE	canonical	3	124	junction_2	18	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	False	NA	20	True	AATAAA	-19	NA	142623172	142624828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_69562_4	chr7	+	1595	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	-229	-2	-110	2	multi-exon	FALSE	canonical	3	124	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142622875	142624826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623558_142623672
Isoform_69563_6	chr7	+	801	4	NIC	ENSMUSG00000045752.14	novel	895	4	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	63.0202789231812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGGCTTTTTCC	NA	False	NA	18	True	AATAAA	-17	NA	142623170	142624826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_142623251_142623491_142623558_142623672_142624030_142624528
Isoform_69564_108	chr7	+	1328	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	185	6	10	0	multi-exon	FALSE	canonical	3	158	junction_2	1	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623170	142624824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623588_142623672
Isoform_69565_11	chr7	+	1498	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	20	1	20	-1	multi-exon	FALSE	canonical	3	158	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGGCTTTTTCCGGG	NA	False	NA	21	True	AATAAA	-20	NA	142623005	142624829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623588_142623672
Isoform_69566_3	chr7	+	826	4	FSM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	68	1	12	-1	multi-exon	FALSE	canonical	3	12	junction_3	69.3012746395524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142623172	142624823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623251_142623491_142623588_142623672_142624030_142624528
Isoform_69567_12	chr7	+	1503	2	FSM	ENSMUSG00000045752.14	ENSMUST00000133410.3	1091	2	130	-542	47	1	multi-exon	FALSE	canonical	3	124	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTGTGGCTTTTTC	NA	False	NA	17	True	AATAAA	-16	NA	142623207	142624825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623558_142623672
Isoform_69568_8	chr7	+	1490	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	29	6	-3	3	multi-exon	FALSE	canonical	2	3	junction_2	2.44131112314674	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTTCTTTGGGCTTT	885	False	NA	NA	False	AATAAA	-19	NA	143027501	143053065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
Isoform_69569_23	chr7	+	2535	9	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383950	143402146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_69572_903	chr7	+	2362	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	588	5	-20	-4	3prime_fragment	TRUE	canonical	3	394	junction_5	16.39686381163	903	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTATGTTGTACTGT	NA	False	NA	27	True	NA	NA	NA	143383950	143402142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_69577_20	chr7	+	2452	8	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	147.002151865411	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTATGTTGTACTGT	NA	False	NA	27	True	NA	NA	NA	143383994	143402142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_143384137_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
Isoform_6958_12	chr11	-	1380	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	192	4	192	-4	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATACCTTGCTTATT	9791	False	NA	NA	False	AATAAA	-17	NA	100036754	100031639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
Isoform_69581_3	chr7	+	2653	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	-353	-1	159	1	multi-exon	FALSE	canonical	3	54	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCATATGGTTGGTGA	NA	False	NA	4	True	NA	NA	NA	144391978	144398174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_144392665_144394407_144394512_144396311
Isoform_69582_4	chr7	+	2291	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	9	-1	9	1	multi-exon	FALSE	canonical	3	54	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCATATGGTTGGTGA	NA	False	NA	4	True	NA	NA	NA	144392340	144398174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_144392665_144394407_144394512_144396311
Isoform_69583_67	chr7	+	3460	2	ISM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	0	-1	0	1	intron_retention	FALSE	canonical	3	722	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTGTCTGCTTTGT	8002	False	NA	29	True	ATTAAA	-19	NA	144415122	144418981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_144415570_144415968
Isoform_69584_2647	chr7	+	3033	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	0	-3	0	3	multi-exon	FALSE	canonical	3	677	junction_2	22.5	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTGCTTTGTCT	8002	False	NA	31	True	ATTAAA	-21	NA	144415122	144418983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_144415570_144415968_144416073_144416501
Isoform_6960_28	chr11	-	1499	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	52	0	-52	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGTGGCCTTTGTT	NA	False	NA	-4	True	ATTAAA	-15	NA	100151855	100147094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
Isoform_69601_8	chr7	+	1893	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	-89	6	-89	-6	multi-exon	FALSE	canonical	2	3	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGTTATTTGTTCTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	144450178	144454684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_144450669_144450852_144450957_144453385
Isoform_69602_3	chr7	+	2250	4	ISM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	28	5	-8	-5	intron_retention	FALSE	canonical	3	87	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTAGTCTGTCTGGGA	NA	False	NA	3	True	AATAAA	-13	NA	144468899	144474866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960
Isoform_69603_60	chr7	+	1984	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	26	5	-10	-5	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTAGTCTGTCTGGGA	NA	False	NA	3	True	AATAAA	-13	NA	144468897	144474866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
Isoform_69608_12	chr7	+	1014	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-261	-781	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCCTACTGTGCCT	NA	False	NA	7	True	AATAAA	-20	NA	43362561	43376177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
Isoform_69609_15	chr7	+	2797	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-83	3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTCATGCTTTCTTTC	2707	False	NA	17	True	AATATA	-11	NA	3341535	3347868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3341614_3341727_3341816_3345237
Isoform_6961_10	chr11	-	1554	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	-3	0	3	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTGGTGTGTGTGTGT	NA	False	NA	51	True	AATAAA	-19	NA	100151855	100147039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
Isoform_69610_6	chr7	+	2689	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-111	-106	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTTTAATTTTCT	2679	False	NA	15	True	NA	NA	NA	3341507	3347732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_3341614_3341727_3341816_3345237
Isoform_69618_19	chr7	+	657	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	712.609621196783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCAATTTCAGTGTGT	4018	False	NA	33	True	AATAAA	-25	NA	126811837	126813461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_126811894_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_6962_4	chr11	-	1628	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	-130	53	-130	-53	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAACTGTGGCCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	100151985	100147095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
Isoform_69622_12	chr7	+	3483	8	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-47	5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.478320108186	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTATAGCGTGTAAGTC	NA	False	NA	32	True	NA	NA	NA	12568916	12584509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_12569208_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
Isoform_69627_7	chr7	+	1487	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30729	-10	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	100.011249367259	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81889364	81956617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
Isoform_6963_8	chr11	-	1024	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	33	5	33	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100156771	100153712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
Isoform_69630_8	chr7	+	786	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-73	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	204.430330430687	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCTATTCCCTGTTTG	8199	False	NA	23	True	AATAAA	-23	NA	101545996	101548749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
Isoform_69631_13	chr7	+	664	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	719.411101758468	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTGGCAATTTCAGT	3975	False	NA	29	True	AATAAA	-21	NA	126811794	126813457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_126811862_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
Isoform_69632_7	chr7	+	1182	3	NNC	ENSMUSG00000064264.15	novel	1045	3	NA	NA	400	-17	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTGGCTCCGCATAT	NA	False	NA	17	True	AATAAA	-11	NA	24206954	24215088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_24207302_24209970_24210179_24214461
Isoform_69634_6	chr7	+	2742	6	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1277	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.6471214969498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837805	127844272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_127837947_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
Isoform_69636_11	chr7	+	2094	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	26.4262547247148	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932638	26957370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_26932708_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
Isoform_69637_7	chr7	+	3304	5	NNC	ENSMUSG00000030600.16	novel	3060	2	NA	NA	-3597	4	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	26.5706605111728	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTGTGTTTTTG	381	False	NA	32	True	ATTAAA	-36	NA	28147807	28167671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28147929_28153921_28153955_28157383_28157439_28158051_28159489_28166013
Isoform_69638_7	chr7	+	2080	4	NNC	ENSMUSG00000095922.2	novel	1140	3	NA	NA	-2424	848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTTCTGTCATCTGTA	NA	False	NA	NA	False	NA	NA	NA	14972772	14977761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_14972820_14975151_14975414_14975539_14975740_14976190
Isoform_69640_3	chr7	+	1289	6	NNC	ENSMUSG00000070777.6	novel	2888	12	NA	NA	-1828	-15618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.489897948556636	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAAAAAGAGAAGA	27	False	NA	NA	False	CATAAA	-11	NA	19697508	19708587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_19697733_19701666_19701754_19704089_19704369_19705428_19705711_19708096_19708192_19708265
Isoform_69641_5	chr7	+	3859	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2474	-2	intron_retention	FALSE	canonical	1	4	junction_1	113.818799571083	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130176693	130366512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
Isoform_69642_4	chr7	+	2807	13	NNC	ENSMUSG00000038637.16	novel	2502	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.27247474309048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGGCTGACCT	397	False	NA	15	True	AATAAA	-19	NA	140774069	140789967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140774812_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
Isoform_69643_4	chr7	+	2239	3	NNC	ENSMUSG00000045165.7	novel	1932	2	NA	NA	-688	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATCCTTTTTGTATG	NA	False	NA	-1	True	NA	NA	NA	126689842	126693151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_126690035_126690408_126690645_126691340
Isoform_69648_4	chr7	+	1653	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.8246699929915	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTCTGTGCGTTTGG	1278	False	NA	16	True	AATAAA	-17	NA	45165225	45171805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_6965_3	chr11	-	1053	6	ISM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	2721	3	-1172	-3	3prime_fragment	FALSE	canonical	3	51	junction_5	18.4542677990756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100157976	100153715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760
Isoform_69650_3	chr7	+	2933	3	NNC	ENSMUSG00000057706.8	novel	3355	2	NA	NA	-151	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAGAAAAATCACTGT	NA	False	NA	NA	False	AATAAA	-2	NA	82516389	82520766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_82516434_82517049_82517136_82517963
Isoform_69651_3	chr7	+	2104	5	NNC	ENSMUSG00000030494.14	novel	3508	15	NA	NA	635	-2	intron_retention	FALSE	canonical	3	11	junction_1	46.2952481362828	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTTCTTTTTTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	35082624	35091708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35082820_35083393_35083471_35084062_35084210_35084751_35084908_35090179
Isoform_69652_6	chr7	+	579	3	NNC	ENSMUSG00000007944.9	novel	2052	3	NA	NA	-6362	-1140	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTCCTTTGTGTGGTCT	NA	False	NA	9	True	NA	NA	NA	27346977	27355631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_27347078_27354336_27354520_27355335
Isoform_69653_6	chr7	+	1630	4	NNC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-59	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	103.170839980211	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTCTTTTTGTTAGCT	NA	False	NA	23	True	AATAAA	-16	NA	16044320	16052127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_16044386_16046050_16046340_16047551_16047743_16051042
Isoform_69654_3	chr7	+	1599	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	24.8034246938444	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTCTGTTCTGTGCGTT	1284	False	NA	13	True	AATAAA	-14	NA	45165231	45171802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_45165379_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
Isoform_69655_3	chr7	+	1237	7	NNC	ENSMUSG00000055629.6	novel	476	3	NA	NA	-13	-10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	76.3728063878469	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTGACTTGTTTTCT	NA	False	NA	14	True	AATGAA	-15	NA	140650174	140652303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_140650225_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
Isoform_69658_3	chr7	+	2515	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	232	453	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.5554871372799	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAACAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	27391569	27403945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27398077_27398177_27401804
Isoform_69659_3	chr7	+	852	4	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	3720	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	58.6590904198905	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35131466	35138111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35131700_35131942_35132033_35134898_35135069_35137752
Isoform_6966_27	chr11	-	1655	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-113	0	-113	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100160810	100153712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
Isoform_69660_4	chr7	+	1378	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	10	157	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	141.576834263237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAATCTCTCTCT	NA	False	NA	19	True	AATAAA	-20	NA	139717585	139730517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_139717761_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
Isoform_69661_4	chr7	+	736	3	Genic_Genomic	ENSMUSG00000091955.3	novel	485	1	NA	NA	-8298	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGATTAAACTCCTGG	5840	False	NA	NA	False	AATAAA	-34	NA	24553339	24562122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_24553498_24553668_24553741_24561616
Isoform_69663_3	chr7	+	1989	15	NNC	ENSMUSG00000030492.17	novel	1940	13	NA	NA	-555	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.56347977784662	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTGTTTAATACTAT	NA	False	NA	NA	False	AATGAA	-12	NA	35147665	35165423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_35147849_35148488_35148572_35148773_35148880_35149174_35149312_35151793_35151942_35152818_35153062_35153478_35153605_35153982_35154083_35155001_35155047_35155538_35155663_35156432_35156537_35159271_35159369_35160199_35160350_35163020_35163196_35165255
Isoform_69666_3	chr7	+	1924	6	NNC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	-1	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_1	20.3803827245712	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGTTCATATCTTTT	8825	False	NA	NA	False	AATAAA	-15	NA	28392253	28398759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28392357_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
Isoform_69667_3	chr7	+	2296	2	Intergenic	novelGene_1816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCGGTTGTCCTGAGT	973	False	NA	NA	False	NA	NA	NA	63607062	63610216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_63607225_63608082
Isoform_69669_3	chr7	+	528	2	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACAAGTCTCCATTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	64714692	64715871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_64714858_64715508
Isoform_69670_3	chr7	+	815	2	Genic_Genomic	ENSMUSG00000052629.6	novel	2205	1	NA	NA	-249	-1514	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCGAGCTATTTCCTG	NA	False	NA	12	True	AATAAA	-19	NA	78228328	78229268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_78228734_78228858
Isoform_69671_3	chr7	+	176	1	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGAGTATACA	NA	False	NA	NA	False	NA	NA	NA	3236971	3237147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_3237000_3237100
Isoform_69672_6	chr7	-	326	1	Intergenic	novelGene_1807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAGAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	44702755	44702429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_44702400_44702800
Isoform_69673_4	chr7	-	614	1	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	657	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAATGCAAAAG	NA	False	NA	-50	True	AATAAA	-18	NA	44703647	44703033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_44703000_44703600
Isoform_69674_3	chr7	+	837	1	NIC	ENSMUSG00000003421.14	novel	972	9	NA	NA	1	-11142	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	3119	False	NA	NA	False	NA	NA	NA	44711913	44712750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_44711900_44712800
Isoform_69678_3	chr7	+	256	1	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAGAAAAAAAAAAAAGATC	NA	False	NA	NA	False	NA	NA	NA	4906989	4907245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_4907000_4907200
Isoform_6968_11	chr11	-	1720	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-178	0	-178	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100160875	100153712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
Isoform_69680_9	chr7	+	175	1	Intergenic	novelGene_1808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	44891984	44892159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_44892000_44892200
Isoform_69685_7	chr7	+	2438	1	Antisense	novelGene_ENSMUSG00000003863.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-29	NA	45010995	45013433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_45011000_45013400
Isoform_6969_33	chr11	-	3633	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	47	junction_1	163.083567535175	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_69690_3	chr7	-	176	1	Intergenic	novelGene_1810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAATAAAAATATT	6158	False	NA	NA	False	NA	NA	NA	45050901	45050725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_45050700_45050900
Isoform_69691_312	chr7	-	1895	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1641	-145	-1641	145	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109262	45107367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_45107400_45109300
Isoform_69696_16	chr7	+	253	1	Intergenic	novelGene_1811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAAGTTGTTTGGTT	922	False	NA	NA	False	NA	NA	NA	45129966	45130219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_45130000_45130200
Isoform_69697_10	chr7	-	3305	1	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	45	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTACGTGTGTTCTTT	3906	False	NA	42	True	AATAAA	-22	NA	45175647	45172342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_45172300_45175600
Isoform_69699_5	chr7	+	247	1	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAAAACCTAAAAAA	3003	False	NA	NA	False	NA	NA	NA	4951658	4951905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_4951700_4951900
Isoform_697_4	chr10	-	5038	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-307	-249	-164	249	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACATTCCA	NA	False	NA	-12	True	NA	NA	NA	14421087	14280056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
Isoform_69700_3	chr7	+	221	1	Intergenic	novelGene_1812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	45204852	45205073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_45204900_45205100
Isoform_69701_3	chr7	+	641	1	NIC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	-11	-6174	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45208618	45209259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_45208600_45209300
Isoform_69702_3	chr7	+	180	1	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5000223	5000403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_5000200_5000400
Isoform_69711_4	chr7	-	875	1	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-5	-9585	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAGAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	46608225	46607350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_46607400_46608200
Isoform_69714_11	chr7	+	2112	1	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	0	-11778	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48438779	48440891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_48438800_48440900
Isoform_69715_5	chr10	+	182	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20753686	20753868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_20753700_20753900
Isoform_69716_1235	chr7	+	1255	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-20	-3	-20	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	51396374	51397629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_51396400_51397600
Isoform_6972_7	chr11	-	3625	11	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	67	junction_3	157.502507916541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	2049	False	NA	-1	True	AATAAA	-18	NA	100246912	100238151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_69725_3	chr7	+	448	1	NIC	ENSMUSG00000087178.8	novel	468	3	NA	NA	5	-10097	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTATGCTAATGCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	55612283	55612731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_55612300_55612700
Isoform_69728_68	chr7	+	177	1	Intergenic	novelGene_1814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGTACAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	56544314	56544491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_56544300_56544500
Isoform_69729_69	chr7	+	1605	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1751	338	1751	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGATACTGTGAAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	61998067	61999672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_61998100_61999700
Isoform_69731_17	chr7	-	2560	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	-14	1	-14	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGACTCTTTTTTTAA	NA	False	NA	-1	True	AATAAA	-17	NA	62069901	62067341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_62067300_62069900
Isoform_69732_11	chr7	-	2556	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	83	1	83	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAGCCTAACATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	62114175	62111619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_62111600_62114200
Isoform_69733_5	chr7	-	2697	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-58	1	-58	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAGCCTAACATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	62114316	62111619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_62111600_62114300
Isoform_69735_4	chr7	-	167	1	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTGATACAGGA	7153	False	NA	NA	False	NA	NA	NA	3242607	3242440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3242400_3242600
Isoform_69736_5	chr7	+	174	1	Intergenic	novelGene_1815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGACTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	63439099	63439273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_63439100_63439300
Isoform_69737_10	chr7	+	908	1	NIC	ENSMUSG00000033429.11	novel	327	2	NA	NA	4	-5131	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCCCACCCCCCCACCC	NA	False	NA	NA	False	NA	NA	NA	64042491	64043399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_64042500_64043400
Isoform_69738_391	chr7	-	1329	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-41	4658	-41	-4658	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATTGTTTTAGCTT	NA	False	NA	-26	True	AATAAA	-18	NA	64522786	64521457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_64521500_64522800
Isoform_6974_421	chr11	-	3648	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	2	-1530	2	-2	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2050	False	NA	-4	True	AATAAA	-15	NA	100246911	100238154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_69742_5	chr7	+	2388	1	NIC	ENSMUSG00000078681.11	novel	1478	7	NA	NA	9	616	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65343203	65345591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_65343200_65345600
Isoform_69743_4	chr7	+	186	1	Intergenic	novelGene_1817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTTTTAAAAACAAAC	NA	False	NA	1	True	NA	NA	NA	65471723	65471909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_65471700_65471900
Isoform_69744_4	chr7	+	177	1	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAAGG	4909	False	NA	NA	False	NA	NA	NA	6177453	6177630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_6177500_6177600
Isoform_69745_4	chr5	+	174	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	33012851	33013025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_33012900_33013000
Isoform_69747_4	chr7	-	293	1	Intergenic	novelGene_1818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	67869854	67869561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_67869600_67869900
Isoform_69748_4	chr7	+	4031	1	FSM	ENSMUSG00000074071.12	ENSMUST00000208070.2	3984	1	-44	-3	-30	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	AATACA	-7	NA	67925712	67929743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_67925700_67929700
Isoform_69752_13	chr7	-	287	1	FSM	ENSMUSG00000081895.4	ENSMUST00000119383.2	555	1	-35	303	-35	-303	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTGCTGAATTTTT	7653	False	NA	NA	False	GGGGCT	-21	NA	72299094	72298807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_72298800_72299100
Isoform_69754_4	chr7	-	174	1	Intergenic	novelGene_1819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATATAAAG	NA	False	NA	NA	False	NA	NA	NA	73168250	73168076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_73168100_73168200
Isoform_69755_3	chr7	+	202	1	Intergenic	novelGene_1820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATAAACTTC	NA	False	NA	NA	False	GATAAA	-7	NA	73198965	73199167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_73199000_73199200
Isoform_69756_3	chr7	+	1268	1	Intergenic	novelGene_1821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73268386	73269654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_73268400_73269700
Isoform_69757_6	chr7	-	183	1	Intergenic	novelGene_1822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAGAAAA	8402	False	NA	NA	False	NA	NA	NA	73302548	73302365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_73302400_73302500
Isoform_69759_4	chr7	+	2314	1	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	6	-122500	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	75105310	75107624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_75105300_75107600
Isoform_69761_5	chr7	-	4058	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	-1050	1	-1050	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTAGTGGTCTTGCC	NA	False	NA	-1	True	NA	NA	NA	75422844	75418786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_75418800_75422800
Isoform_69763_8	chr7	-	175	1	Intergenic	novelGene_1751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6314128	6313953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_6314000_6314100
Isoform_69764_4	chr7	+	1015	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-324	1514	-324	-1514	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCGAGCTATTTCCTG	NA	False	NA	12	True	AATAAA	-19	NA	78228253	78229268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78228300_78229300
Isoform_69765_16	chr7	+	952	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-259	1512	-259	-1512	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGAGCTATTTCCTGAG	NA	False	NA	14	True	AATAAA	-21	NA	78228318	78229270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_78228300_78229300
Isoform_69768_33	chr11	+	178	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	106884576	106884754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_106884600_106884800
Isoform_69769_20	chr7	-	2320	1	FSM	ENSMUSG00000039176.18	ENSMUST00000201557.2	2279	1	-40	-1	-36	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-41	NA	79115982	79113662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79113700_79116000
Isoform_69770_27	chr7	+	1421	1	FSM	ENSMUSG00000046591.11	ENSMUST00000205750.2	1452	1	34	-3	9	3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1984	False	NA	NA	False	NA	NA	NA	79310003	79311424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_79310000_79311400
Isoform_69772_3	chr7	+	797	1	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	37141	15	26416	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCTAAAAATGCTT	NA	False	NA	1	True	ATTAAA	-11	NA	79347084	79347881	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_79347100_79347900
Isoform_69773_3	chr7	-	194	1	Intergenic	novelGene_1824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATATTCTCTCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	79654222	79654028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_79654000_79654200
Isoform_69775_8	chr7	+	1212	1	NIC	ENSMUSG00000048897.16	novel	5871	5	NA	NA	-1	-55125	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79674580	79675792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79674600_79675800
Isoform_69776_9	chr7	+	3382	1	NIC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	-4	-23810	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79836621	79840003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79836600_79840000
Isoform_69779_4	chr7	-	1034	1	FSM	ENSMUSG00000030538.16	ENSMUST00000206618.2	1016	1	-20	2	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAGCTAAGA	2263	False	NA	NA	False	NA	NA	NA	79882349	79881315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_79881300_79882300
Isoform_6978_8	chr11	-	3940	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	486	junction_1	46.7351349576116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2050	False	NA	-2	True	AATAAA	-17	NA	100246911	100238152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
Isoform_69780_25	chr7	+	783	1	NIC	ENSMUSG00000038943.17	novel	3026	14	NA	NA	1	-9168	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79944227	79945010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_79944200_79945000
Isoform_69782_4	chr11	-	2252	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	1	332727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.950895457782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATCTTTAAAAAAA	978	False	NA	NA	False	NA	NA	NA	79145494	78797470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_78797626_79130573_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
Isoform_69783_4	chr7	+	187	1	Intergenic	novelGene_1825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGAGTTC	4247	False	NA	NA	False	NA	NA	NA	80202843	80203030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_80202800_80203000
Isoform_69785_5	chr7	-	212	1	Intergenic	novelGene_1826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTCAAAAAACTAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	80603581	80603369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_80603400_80603600
Isoform_69786_9	chr7	-	839	1	Intergenic	novelGene_1827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80787197	80786358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_80786400_80787200
Isoform_69789_4	chr7	+	2487	1	NIC	ENSMUSG00000097277.8	novel	679	3	NA	NA	22	-3161	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACCTTTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81173340	81175827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_81173300_81175800
Isoform_69791_48	chr7	-	207	1	Intergenic	novelGene_1828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATAAGATTGATAGGCC	NA	False	NA	NA	False	NA	NA	NA	81502367	81502160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_81502200_81502400
Isoform_69792_9	chr7	+	477	1	NIC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	0	-879	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83281207	83281684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_83281200_83281700
Isoform_69796_234	chr7	-	2776	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	10	1647	10	-1647	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTTTTCGCAGTTACT	NA	False	NA	-13	True	ATTAAA	-16	NA	83533503	83530727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_83530700_83533500
Isoform_69797_15	chr7	-	2993	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-207	1647	-207	-1647	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTTTTCGCAGTTACT	NA	False	NA	-13	True	ATTAAA	-16	NA	83533720	83530727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_83530700_83533700
Isoform_6980_25	chr11	-	1729	6	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	20607	1	-3017	-1	3prime_fragment	FALSE	canonical	3	472	junction_4	54.0014814611599	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	6771	False	NA	-18	True	AATAAA	-17	NA	100267968	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548
Isoform_69814_11	chr7	+	3953	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	64	-641	64	641	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTCTTACTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	90092000	90095953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_90092000_90096000
Isoform_69815_6	chr7	-	1744	1	FSM	ENSMUSG00000041328.17	ENSMUST00000208255.2	1720	1	-31	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTATTTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	92319142	92317398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92317400_92319100
Isoform_69816_22	chr7	-	2546	1	FSM	ENSMUSG00000074024.6	ENSMUST00000098305.4	3811	1	11	1254	2	-1254	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	92390665	92388119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92388100_92390700
Isoform_69818_3	chr7	+	1802	1	FSM	ENSMUSG00000051515.12	ENSMUST00000051179.12	2002	1	49	151	49	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATGGAACAGAGGTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	92729121	92730923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_92729100_92730900
Isoform_69819_397	chr7	-	690	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	-23	-42	-23	4	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	92828875	92828185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_92828200_92828900
Isoform_69829_3	chr7	+	426	1	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	564	False	NA	NA	False	NA	NA	NA	3250426	3250852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_3250400_3250900
Isoform_69830_15	chr7	+	224	1	Intergenic	novelGene_1831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCACAAATACATTTGC	NA	False	NA	NA	False	NA	NA	NA	96402222	96402446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_96402200_96402400
Isoform_69831_4	chr7	+	3100	1	FSM	ENSMUSG00000035623.15	ENSMUST00000205536.2	3085	1	6	-21	-2	21	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	97229101	97232201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_97229100_97232200
Isoform_69832_4	chr7	+	287	1	Intergenic	novelGene_1832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAGGGAAAAA	1961	False	NA	NA	False	NA	NA	NA	97301238	97301525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_97301200_97301500
Isoform_69833_3	chr7	-	182	1	Intergenic	novelGene_1833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAACCCG	NA	False	NA	NA	False	NA	NA	NA	97830096	97829914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_97829900_97830100
Isoform_69834_4	chr7	+	2471	1	Intergenic	novelGene_1834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAAACTGATTTAAAAA	581	False	NA	NA	False	TATAAA	-38	NA	97831573	97834044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_97831600_97834000
Isoform_69835_4	chr7	+	909	1	Intergenic	novelGene_1835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAGAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	98306129	98307038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_98306100_98307000
Isoform_69837_6	chr7	-	204	1	Intergenic	novelGene_1836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99081063	99080859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_99080900_99081100
Isoform_69838_3	chr7	-	177	1	Intergenic	novelGene_1837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7703	False	NA	NA	False	NA	NA	NA	99154518	99154341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_99154300_99154500
Isoform_69839_5	chr7	-	178	1	Intergenic	novelGene_1838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTCATTG	4159	False	NA	NA	False	NA	NA	NA	99234434	99234256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_99234300_99234400
Isoform_69840_3	chr9	-	172	1	Intergenic	novelGene_2092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97032871	97032699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_97032700_97032900
Isoform_69841_4	chr7	-	168	1	Intergenic	novelGene_1839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	100282144	100281976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_100282000_100282100
Isoform_69843_3	chr7	+	395	1	ISM	ENSMUSG00000029461.18	ENSMUST00000107042.9	6388	9	132144	2208	52404	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100487985	100488380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_100488000_100488400
Isoform_69844_69	chr7	+	182	1	Intergenic	novelGene_1840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTACATGAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	100633171	100633353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_100633200_100633400
Isoform_69845_3	chr7	-	193	1	Intergenic	novelGene_1841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAATAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	100900048	100899855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_100899900_100900000
Isoform_69846_3	chr7	+	177	1	Intergenic	novelGene_1842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101446549	101446726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_101446500_101446700
Isoform_69849_3	chr7	+	1498	1	Genic_Genomic	ENSMUSG00000070425.14_ENSMUSG00000099481.7	novel	NA	NA	NA	NA	-10	-3005	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	101714707	101716205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_101714700_101716200
Isoform_69850_11	chr7	-	815	1	ISM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	89960	4	63349	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGTGGTATTGACT	NA	False	NA	-10	True	AATAAA	-16	NA	101769423	101768608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_101768600_101769400
Isoform_69851_4	chr7	+	190	1	Intergenic	novelGene_1844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	101831890	101832080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_101831900_101832100
Isoform_69856_5	chr7	+	1049	1	NIC	ENSMUSG00000072244.12	novel	1490	3	NA	NA	21	-6032	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	103868022	103869071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_103868000_103869100
Isoform_69857_14	chr7	-	171	1	Intergenic	novelGene_1846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTTAAAAAAAAAAAAAAAG	9402	False	NA	NA	False	NA	NA	NA	103872666	103872495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_103872500_103872700
Isoform_69858_11	chr7	-	252	1	Intergenic	novelGene_1847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	103907029	103906777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_103906800_103907000
Isoform_69861_9	chr7	+	1494	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	-23	1	-23	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGCTGCGTAGTAGTC	NA	False	NA	19	True	NA	NA	NA	106808628	106810122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_106808600_106810100
Isoform_69867_9	chr7	+	2573	1	FSM	ENSMUSG00000065016.3	ENSMUST00000083082.3	132	1	-924	-1517	-924	1517	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGCATCCTTCC	NA	False	NA	4	True	ATTAAA	-16	NA	109118402	109120975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_109118400_109121000
Isoform_69869_35	chr7	+	339	1	Intergenic	novelGene_1850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109584077	109584416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_109584100_109584400
Isoform_69870_8	chr7	-	190	1	Intergenic	novelGene_1851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTTTTTTTTAAAT	9615	False	NA	NA	False	NA	NA	NA	109599612	109599422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_109599400_109599600
Isoform_69871_5	chr7	+	1449	1	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-14461	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAGAAAAGAA	7239	False	NA	NA	False	NA	NA	NA	109617521	109618970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109617500_109619000
Isoform_69872_3	chr7	-	1875	2	Genic_Genomic	ENSMUSG00000073867.3	novel	3339	1	NA	NA	1	-1434	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAAAATTAGGGCAT	5166	False	NA	NA	False	NA	NA	NA	109660531	109658627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_-_109659269_109659297
Isoform_69873_3	chr7	-	3791	1	Antisense	novelGene_ENSMUSG00000031016.10_AS_novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCAGGTCTCCCTTT	9848	False	NA	NA	False	AATAAA	-18	NA	109721863	109718072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_109718100_109721900
Isoform_69874_106	chr7	+	1006	1	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	13	-20222	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGC	NA	False	NA	NA	False	NA	NA	NA	109721265	109722271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_109721300_109722300
Isoform_69879_4	chr7	+	200	1	Intergenic	novelGene_1852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATGCACGGGAT	NA	False	NA	NA	False	NA	NA	NA	109766853	109767053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_109766900_109767100
Isoform_69883_3	chr7	-	177	1	Intergenic	novelGene_1853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAAGCCATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	110706886	110706709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_110706700_110706900
Isoform_69884_3	chr7	+	299	1	Intergenic	novelGene_1752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATCATATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	12668483	12668782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_12668500_12668800
Isoform_69885_3	chr7	+	2204	1	NIC	ENSMUSG00000055320.19	novel	2543	12	NA	NA	-51	-77867	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGTTTAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-43	NA	112278665	112280869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_112278700_112280900
Isoform_69886_3	chr12	-	175	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	3542548	3542373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_-_3542400_3542500
Isoform_69887_5	chr11	-	176	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68731633	68731457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_68731500_68731600
Isoform_69888_23	chr7	+	2253	1	FSM	ENSMUSG00000098132.2	ENSMUST00000182858.2	3496	1	0	1243	0	-1243	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGACTGTTTACATT	NA	False	NA	NA	False	GATAAA	-15	NA	112553168	112555421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_112553200_112555400
Isoform_69889_3	chr7	-	757	1	Intergenic	novelGene_1854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGCAAAGGATCTGAA	NA	False	NA	NA	False	NA	NA	NA	112859874	112859117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_112859100_112859900
Isoform_69892_5	chr2	+	177	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30279876	30280053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_30279900_30280100
Isoform_6990_33	chr11	-	3215	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_13	141.860503195442	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288589	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277212_100288461
Isoform_69905_3	chr7	+	176	1	Intergenic	novelGene_1855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115926973	115927149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_115927000_115927100
Isoform_69906_15	chr18	+	178	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATCTACCACTT	NA	False	NA	NA	False	NA	NA	NA	24367689	24367867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_+_24367700_24367900
Isoform_69907_3	chr7	-	340	1	Intergenic	novelGene_1856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAATAAGGTT	NA	False	NA	NA	False	NA	NA	NA	116310802	116310462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_116310500_116310800
Isoform_69909_3	chr7	+	183	1	Intergenic	novelGene_1753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	12720292	12720475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_12720300_12720500
Isoform_6991_13	chr11	-	3358	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	142.103221088711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100277590	100261446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277321
Isoform_69910_5	chr7	+	169	1	Intergenic	novelGene_1857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117839993	117840162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_117840000_117840200
Isoform_69911_5	chr7	-	2691	1	NIC	ENSMUSG00000030655.16	novel	1516	10	NA	NA	16	-37199	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117842877	117840186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_117840200_117842900
Isoform_69913_3	chr9	-	173	1	Intergenic	novelGene_2107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	109956448	109956275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_109956300_109956400
Isoform_69918_811	chr7	+	2310	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-214	-1124	-12	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	811	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339136	119341446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_119339100_119341400
Isoform_69923_6	chr7	+	1765	1	NIC	ENSMUSG00000030880.15	novel	2545	20	NA	NA	0	-18966	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120516966	120518731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_120517000_120518700
Isoform_69928_25	chr7	-	2091	1	FSM	ENSMUSG00000044702.14	ENSMUST00000205352.2	2145	1	47	7	8	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121732161	121730070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_121730100_121732200
Isoform_6993_13	chr11	-	3260	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	76	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	142.103221088711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100277491	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277321
Isoform_69930_54	chr7	+	3125	3	Genic_Genomic	ENSMUSG00000077886.3_ENSMUSG00000077815.3_ENSMUSG00000077903.3	novel	84	1	NA	NA	-790	171	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGCTGCTTTCTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	3266509	3269686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_3267572_3267596_3268625_3268651
Isoform_69935_6	chr7	-	195	1	Intergenic	novelGene_1861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAGAAAAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	122566982	122566787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_122566800_122567000
Isoform_69936_8	chr7	+	2960	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-646	-3131	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	6920	False	NA	NA	False	NA	NA	NA	122569140	122572100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_122569100_122572100
Isoform_69937_3	chr7	+	1228	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-670	-4887	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGTAAGAGGCACACG	6896	False	NA	NA	False	NA	NA	NA	122569116	122570344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_122569100_122570300
Isoform_69939_9	chr7	+	169	1	Intergenic	novelGene_1862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	122797214	122797383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_122797200_122797400
Isoform_69940_13	chr7	-	1028	1	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-31	-13452	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	125306880	125305852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_125305900_125306900
Isoform_69942_8	chr7	-	179	1	Intergenic	novelGene_1863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	125791367	125791188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_125791200_125791400
Isoform_69943_3	chr7	+	197	1	Intergenic	novelGene_1864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125896974	125897171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_125897000_125897200
Isoform_69947_18	chr7	+	251	1	Intergenic	novelGene_1865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	126076353	126076604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_126076400_126076600
Isoform_69948_5	chr13	-	175	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATAATTGATG	NA	False	NA	NA	False	NA	NA	NA	100701440	100701265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_100701300_100701400
Isoform_69949_5	chr7	+	749	1	Antisense	novelGene_ENSMUSG00000030738.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCCAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126165105	126165854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_126165100_126165900
Isoform_6995_20	chr11	-	3219	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_13	142.103221088711	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288575	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288446
Isoform_69951_12	chr7	-	1606	1	NIC	ENSMUSG00000030717.10	novel	829	3	NA	NA	-14	-442	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAATACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	126224661	126223055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_126223100_126224700
Isoform_69953_5	chr16	+	196	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATGATGTAGTCACCA	NA	False	NA	NA	False	NA	NA	NA	13583324	13583520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_13583300_13583500
Isoform_69954_6	chr7	-	662	1	FSM	ENSMUSG00000066175.3	ENSMUST00000084587.2	348	1	-3	-311	-3	311	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTAGCTACATCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	126248745	126248083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126248100_126248700
Isoform_69956_3	chr7	+	259	1	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTATATAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	3272710	3272969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_3272700_3273000
Isoform_6996_652	chr11	-	3218	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-14	1	0	-1	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288589	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
Isoform_69961_10	chr7	+	856	1	FSM	ENSMUSG00000045598.11	ENSMUST00000205367.2	827	1	-28	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	8313	False	NA	NA	False	NA	NA	NA	126832437	126833293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_126832400_126833300
Isoform_69964_1556	chr7	-	2178	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	-4	3	-4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGCTAATGTTTG	2837	False	NA	-11	True	AATAAA	-43	NA	126873231	126871053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_126871100_126873200
Isoform_69974_32	chr7	+	199	1	Genic_Genomic	ENSMUSG00000108483.2	novel	NA	NA	NA	NA	4802	30	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACCAC	NA	False	NA	NA	False	NA	NA	NA	127038395	127038594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_127038400_127038600
Isoform_69975_3	chr7	-	1653	1	NIC	ENSMUSG00000048921.12	novel	3621	3	NA	NA	19	-3732	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAGAA	4376	False	NA	NA	False	NA	NA	NA	127048311	127046658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127046700_127048300
Isoform_69976_6	chr7	+	239	1	Intergenic	novelGene_1866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAAGGAAGCAGGCGCT	NA	False	NA	NA	False	NA	NA	NA	127062486	127062725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_127062500_127062700
Isoform_69977_6	chr12	+	175	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110796960	110797135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_110797000_110797100
Isoform_69978_19	chr7	+	180	1	Intergenic	novelGene_1867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127107779	127107959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_127107800_127108000
Isoform_69979_6	chr7	-	1102	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	470	860	470	-860	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGGCTGGGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	127111571	127110469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127110500_127111600
Isoform_6998_27	chr11	-	3288	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-84	1	-70	-1	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCTGTTAAAAGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	100288659	100261445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
Isoform_69980_5	chr7	-	1563	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	7	862	7	-862	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAAGGCTGGGTGGTG	10008	False	NA	NA	False	NA	NA	NA	127112034	127110471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127110500_127112000
Isoform_69981_3	chr7	+	1527	1	ISM	ENSMUSG00000053877.13	ENSMUST00000187040.7	10654	34	46669	6	25927	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATCCGTGTAAGGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	127158858	127160385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_127158900_127160400
Isoform_69982_5	chr7	-	928	1	Antisense	novelGene_ENSMUSG00000042308.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127376190	127375262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_127375300_127376200
Isoform_69983_5	chr7	-	177	1	Intergenic	novelGene_1868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	127437365	127437188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_127437200_127437400
Isoform_69984_3	chr7	+	1025	1	FSM	ENSMUSG00000049739.11	ENSMUST00000205364.2	2296	1	-472	1743	-472	-1743	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAAAAAGAAAACAA	3204	False	NA	NA	False	NA	NA	NA	127474920	127475945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127474900_127475900
Isoform_69985_14	chr7	+	597	1	FSM	ENSMUSG00000049739.11	ENSMUST00000205364.2	2296	1	-44	1743	-44	-1743	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAAAAAGAAAACAA	139	False	NA	NA	False	NA	NA	NA	127475348	127475945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_127475300_127475900
Isoform_69988_5	chr7	-	465	1	NIC	ENSMUSG00000030793.5	novel	3800	3	NA	NA	114	-1649	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127592925	127592460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_127592500_127592900
Isoform_69989_3	chr7	+	187	1	Intergenic	novelGene_1754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	15572575	15572762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_15572600_15572800
Isoform_69990_3	chr7	-	3614	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	-20	-20	-20	20	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATTTGGTCTTTGGCTC	5253	False	NA	NA	False	AATAAA	-34	NA	127837223	127833609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_127833600_127837200
Isoform_69991_3	chr7	-	206	1	Intergenic	novelGene_1869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAACTATTTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	127898776	127898570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_127898600_127898800
Isoform_69992_6	chr7	+	220	1	Intergenic	novelGene_1870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGGCGTGGTGGCACA	7385	False	NA	NA	False	NA	NA	NA	128091291	128091511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_128091300_128091500
Isoform_69993_10	chr5	-	171	1	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34546510	34546339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_34546300_34546500
Isoform_69995_3	chr7	-	174	1	Intergenic	novelGene_1871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	130547463	130547289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_130547300_130547500
Isoform_69996_6	chr7	+	673	1	FSM	ENSMUSG00000063179.14	ENSMUST00000207419.2	675	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	AAGAAA	-8	NA	130972884	130973557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_130972900_130973600
Isoform_69999_16	chr7	+	1087	1	NIC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	1	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	131162120	131163207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_131162100_131163200
Isoform_700_128	chr10	-	1336	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	60	578	0	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581244	14531076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_70001_3	chr7	-	178	1	FSM	ENSMUSG00000062758.7	ENSMUST00000085365.6	801	1	660	-37	660	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAAAAAAATCGCC	NA	False	NA	NA	False	CATAAA	-11	NA	131216057	131215879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_131215900_131216100
Isoform_70005_9	chr7	-	190	1	Intergenic	novelGene_1872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCAGCTAGCCTTAAC	NA	False	NA	NA	False	NA	NA	NA	132460187	132459997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_132460000_132460200
Isoform_70006_5	chr7	+	1759	1	FSM	ENSMUSG00000030965.20	ENSMUST00000210077.2	1778	1	12	7	-2	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132460975	132462734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_132461000_132462700
Isoform_70009_6	chr7	-	179	1	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAAACAATCCA	4662	False	NA	NA	False	NA	NA	NA	3285481	3285302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3285300_3285500
Isoform_70012_8	chr7	+	194	1	Intergenic	novelGene_1873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTGAATC	7717	False	NA	NA	False	NA	NA	NA	135404063	135404257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_135404100_135404300
Isoform_70013_4	chr7	+	655	1	Intergenic	novelGene_1755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGACTGGCTGATCTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	15782325	15782980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_15782300_15783000
Isoform_70015_3	chr7	+	177	1	Intergenic	novelGene_1874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	138939295	138939472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_138939300_138939500
Isoform_70016_3	chr7	+	181	1	Intergenic	novelGene_1875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTGGCATTA	8483	False	NA	NA	False	NA	NA	NA	139078999	139079180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_139079000_139079200
Isoform_70017_21	chr7	+	1288	1	NIC	ENSMUSG00000047751.10	novel	1227	2	NA	NA	33	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTGTGAATGAATTCG	NA	False	NA	NA	False	AATAAA	-17	NA	139523734	139525022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139523700_139525000
Isoform_70018_5	chr7	+	2338	1	NIC	ENSMUSG00000025470.12	novel	878	5	NA	NA	6	1129	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTAAAAACCTTAAAG	NA	False	NA	NA	False	NA	NA	NA	139616330	139618668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_139616300_139618700
Isoform_70019_20	chr7	+	219	1	Antisense	novelGene_ENSMUSG00000025465.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAGAAAGAAACTTTTGA	NA	False	NA	NA	False	NA	NA	NA	139693451	139693670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_139693500_139693700
Isoform_70022_9	chr7	-	1913	1	FSM	ENSMUSG00000025484.10	ENSMUST00000210157.2	1882	1	-28	-3	-14	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	140436211	140434298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140434300_140436200
Isoform_70023_11	chr7	-	766	1	FSM	ENSMUSG00000025486.18	ENSMUST00000210398.2	1223	1	458	-1	-11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	140461751	140460985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140461000_140461800
Isoform_70024_5	chr7	+	178	1	Intergenic	novelGene_1756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	15983344	15983522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_15983300_15983500
Isoform_70025_6	chr7	+	1194	1	NIC	ENSMUSG00000062031.14	novel	2748	12	NA	NA	11	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAAAAAACATG	NA	False	NA	NA	False	NA	NA	NA	140521504	140522698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_140521500_140522700
Isoform_70027_4	chr7	-	228	1	Intergenic	novelGene_1877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTTTAACCAGGATT	NA	False	NA	NA	False	NA	NA	NA	140737757	140737529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_140737500_140737800
Isoform_70029_8	chr7	-	1291	1	FSM	ENSMUSG00000091811.3	ENSMUST00000169612.3	1605	1	314	0	314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16007228	16005937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_16005900_16007200
Isoform_7003_7	chr11	-	2041	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	120	17	120	-17	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATCATAACACCTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	100305542	100299298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_70030_3	chr7	+	330	1	Intergenic	novelGene_1878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATCAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	140759615	140759945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_140759600_140759900
Isoform_70031_3	chr7	-	2164	1	FSM	ENSMUSG00000065551.3	ENSMUST00000083617.3	110	1	-232	-1822	-232	1822	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140801638	140799474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_140799500_140801600
Isoform_70032_4	chr7	+	173	1	ISM	ENSMUSG00000025505.17	ENSMUST00000134221.2	749	2	92	2225	92	595	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTGATGAG	6589	False	NA	NA	False	NA	NA	NA	140913662	140913835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_140913700_140913800
Isoform_70033_11	chr7	+	176	1	Intergenic	novelGene_1880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTAT	7423	False	NA	NA	False	NA	NA	NA	140928363	140928539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_140928400_140928500
Isoform_70034_7	chr7	-	165	1	Intergenic	novelGene_1757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	16024166	16024001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_16024000_16024200
Isoform_70040_3	chr7	-	202	1	Intergenic	novelGene_1881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCATCACTGTGGCTC	9953	False	NA	NA	False	NA	NA	NA	141255513	141255311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_141255300_141255500
Isoform_70043_7	chr7	+	768	1	FSM	ENSMUSG00000037772.14	ENSMUST00000209576.2	3715	1	4	2943	4	-2943	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAATAATAATA	NA	False	NA	NA	False	GGGGCT	-6	NA	142086902	142087670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142086900_142087700
Isoform_70044_3	chr7	-	172	1	Intergenic	novelGene_1882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAATAAATAAA	2466	False	NA	NA	False	NA	NA	NA	142227509	142227337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_142227300_142227500
Isoform_70045_6	chr7	+	1607	1	FSM	ENSMUSG00000045752.14	ENSMUST00000207776.2	1735	1	129	-1	58	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTGTGGCTTTTTC	NA	False	NA	17	True	AATAAA	-16	NA	142623218	142624825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_142623200_142624800
Isoform_70046_7	chr7	-	182	1	Intergenic	novelGene_1883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGT	9307	False	NA	NA	False	NA	NA	NA	143059644	143059462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_143059500_143059600
Isoform_70049_52	chr7	-	2193	1	FSM	ENSMUSG00000010755.18	ENSMUST00000207168.2	2213	1	24	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACGAAAGAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	143153793	143151600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_143151600_143153800
Isoform_7005_4	chr11	-	2406	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	106	-334	106	334	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTCTTTCCTGGAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	100305556	100298947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
Isoform_7006_21	chr11	-	1473	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	-121	-4	24	1	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCACGCGTCTTTAATC	NA	False	NA	-4	True	ATTAAA	-17	NA	100331875	100320180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
Isoform_70061_3	chr7	-	1365	1	ISM	ENSMUSG00000096999.2	ENSMUST00000180930.2	2732	2	1535	2	1535	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAGAAAGAAAGAAAGA	113	False	NA	NA	False	NA	NA	NA	144449663	144448298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_144448300_144449700
Isoform_70064_3	chr7	+	1123	1	Intergenic	novelGene_1758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTCGATATC	3187	False	NA	NA	False	NA	NA	NA	16133540	16134663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_16133500_16134700
Isoform_70065_3	chr7	+	548	1	Intergenic	novelGene_1759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTCGATATC	3762	False	NA	NA	False	NA	NA	NA	16134115	16134663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_16134100_16134700
Isoform_70066_13	chr7	+	458	1	Intergenic	novelGene_1760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTCGATATC	3852	False	NA	NA	False	NA	NA	NA	16134205	16134663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_16134200_16134700
Isoform_70067_3	chr7	+	216	1	Intergenic	novelGene_1761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTACCAAGTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	16466982	16467198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_16467000_16467200
Isoform_70068_3	chr7	+	174	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	889	False	NA	NA	False	NA	NA	NA	3304593	3304767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_3304600_3304800
Isoform_70069_194	chr7	+	4107	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-1693	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	16515293	16519400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_16515300_16519400
Isoform_7007_294	chr11	-	1373	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	25	1	9	-1	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331890	100320179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
Isoform_70075_3	chr7	+	1817	1	ISM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	10161	168	10161	-168	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGATTCTTGTTCTGC	3789	False	NA	21	True	AATAAA	-17	NA	16619402	16621219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_16619400_16621200
Isoform_70078_3	chr7	+	3633	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1102	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTGTTTCCGAGGTG	5778	False	NA	18	True	AATAAA	-15	NA	16727734	16731439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_16729666_16729713_16730022_16730045
Isoform_70079_31	chr7	+	3540	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1194	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTTTCCGAGGT	5870	False	NA	17	True	AATAAA	-14	NA	16727826	16731438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_16729666_16729713_16730022_16730045
Isoform_70080_4	chr7	+	3983	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1154	400	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAGTCTGAAAAAAGGA	5830	False	NA	NA	False	NA	NA	NA	16727786	16731841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_+_16729666_16729713_16730061_16730084
Isoform_70083_7	chr7	+	179	1	Intergenic	novelGene_1762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAACACACAACT	2359	False	NA	NA	False	NA	NA	NA	18649442	18649621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_18649400_18649600
Isoform_70084_12	chr7	+	207	1	Intergenic	novelGene_1763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	18737481	18737688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_18737500_18737700
Isoform_70085_342	chr7	+	2531	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	14	189	14	-189	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCCTTCTTGTTCCCTTT	NA	False	NA	23	True	AATAAA	-23	NA	18737982	18740513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18738000_18740500
Isoform_70086_19	chr7	+	2717	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	15	2	15	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGGTACTGAGATTCT	NA	False	NA	19	True	ATTAAA	-25	NA	18737983	18740700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_18738000_18740700
Isoform_7009_9	chr11	-	1370	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	-24	-2	-24	-1	multi-exon	FALSE	canonical	3	21	junction_7	183.081112836772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331870	100320179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
Isoform_70091_6	chr7	+	175	1	Intergenic	novelGene_1764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18805914	18806089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_18805900_18806100
Isoform_70094_11	chr13	-	177	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70842891	70842714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_70842700_70842900
Isoform_70095_3	chr7	-	171	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATATG	NA	False	NA	NA	False	NA	NA	NA	3408134	3407963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3408000_3408100
Isoform_70096_9	chr7	+	1112	1	Antisense	novelGene_ENSMUSG00000030402.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAGGTATAACACATT	8759	False	NA	3	True	AATAAA	-21	NA	19013127	19014239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_+_19013100_19014200
Isoform_70097_8	chr7	-	1853	2	NNC	ENSMUSG00000057667.8	novel	3188	2	NA	NA	21	-1306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATCAGCTGATATGCT	NA	False	NA	NA	False	NA	NA	NA	19242271	19239716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_-_19241536_19242237
Isoform_70098_4	chr7	-	171	1	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3429833	3429662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3429700_3429800
Isoform_70099_7	chr7	-	2512	1	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-10	-7630	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19338398	19335886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_19335900_19338400
Isoform_701_9	chr10	-	1405	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	-9	578	-9	22	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581313	14531076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_7010_6	chr11	-	1274	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	187.185818405789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331890	100320179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331869
Isoform_70110_3	chr7	+	172	1	Intergenic	novelGene_1766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	21256900	21257072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_21256900_21257100
Isoform_70112_5	chr17	-	408	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	183	-150	183	150	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5866732	5866324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_5866300_5866700
Isoform_70114_3	chr7	+	1177	1	Intergenic	novelGene_1767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAATGTATCCAC	NA	False	NA	NA	False	AATACA	-17	NA	23968245	23969422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_23968200_23969400
Isoform_70115_4	chr7	+	175	1	Intergenic	novelGene_1768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAACGAAAAA	NA	False	NA	NA	False	NA	NA	NA	24162886	24163061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_24162900_24163100
Isoform_70116_6	chr7	-	2477	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	1249	False	NA	NA	False	NA	NA	NA	24206867	24204390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_24204400_24206900
Isoform_70117_3	chr7	-	2619	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGAAAAAAACAAAACAA	1101	False	NA	NA	False	NA	NA	NA	24207015	24204396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_24204400_24207000
Isoform_70118_4	chr7	+	168	1	Intergenic	novelGene_1769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAACAAGATT	NA	False	NA	NA	False	NA	NA	NA	24239643	24239811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_24239600_24239800
Isoform_70119_3	chr7	-	183	1	Intergenic	novelGene_1770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTGACTTATGATC	2061	False	NA	-2	True	NA	NA	NA	24297335	24297152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_24297200_24297300
Isoform_70120_11	chr17	+	180	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	82023648	82023828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_+_82023600_82023800
Isoform_70122_3	chr7	-	176	1	Intergenic	novelGene_1771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	24614823	24614647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_24614600_24614800
Isoform_70123_5	chr7	+	348	1	Intergenic	novelGene_1772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGGAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	24675401	24675749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_24675400_24675700
Isoform_70124_8	chr7	-	198	1	Antisense	novelGene_ENSMUSG00000097017.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	25517970	25517772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_25517800_25518000
Isoform_70125_8	chr7	-	184	1	Intergenic	novelGene_1773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	26854069	26853885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_26853900_26854100
Isoform_70128_4	chr7	-	1483	1	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-12	-20583	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	27033050	27031567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27031600_27033000
Isoform_70129_4	chr19	-	1690	4	Antisense	novelGene_ENSMUSG00000011752.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTTCGCAGCCCGCCC	9930	False	NA	NA	False	NA	NA	NA	41907097	41900444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_41900624_41904041_41904317_41905079_41905262_41906043
Isoform_7013_8	chr11	-	2429	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-38	2	-38	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTAGTTACTTGG	7656	False	NA	-10	True	ATTAAA	-14	NA	100363605	100353441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100355272_100363006
Isoform_70130_9	chr7	-	2393	1	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3582140	3579747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3579700_3582100
Isoform_70131_4	chr7	-	343	1	Intergenic	novelGene_1775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAGA	6181	False	NA	NA	False	NA	NA	NA	27183298	27182955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_27183000_27183300
Isoform_70133_11	chr7	-	2300	1	NIC	ENSMUSG00000087371.2	novel	2713	4	NA	NA	6	-3099	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27207541	27205241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_27205200_27207500
Isoform_70134_17	chr7	-	187	1	Intergenic	novelGene_1776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTTTTGTTTTT	NA	False	NA	-3	True	NA	NA	NA	27286317	27286130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_27286100_27286300
Isoform_70137_15	chr7	+	4288	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	26	19	4	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2754	False	NA	19	True	NA	NA	NA	3648292	3652580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3648300_3652600
Isoform_70138_4	chr7	+	346	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	936	110	936	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACCAATTTTCTGGGA	NA	False	NA	15	True	CATAAA	-35	NA	27968241	27968587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27968200_27968600
Isoform_70140_6	chr7	+	1750	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	3	-2	3	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGGTTGTTTGAAAAT	NA	False	NA	NA	False	AATGAA	-17	NA	27977166	27978916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_27977200_27978900
Isoform_70141_4	chr7	+	209	1	Intergenic	novelGene_1778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGCATCCTATTTTAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	27981724	27981933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_27981700_27981900
Isoform_70142_7	chr7	+	174	1	Intergenic	novelGene_1779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATTTTTATG	NA	False	NA	NA	False	NA	NA	NA	28027114	28027288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_28027100_28027300
Isoform_70144_5	chr7	-	786	1	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	370	-4587	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCGG	9073	False	NA	NA	False	NA	NA	NA	3668469	3667683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_3667700_3668500
Isoform_70145_4	chr7	-	302	1	Intergenic	novelGene_1780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	28074621	28074319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_28074300_28074600
Isoform_70146_20	chr7	-	209	1	Intergenic	novelGene_1781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28189312	28189103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_28189100_28189300
Isoform_70147_3	chr7	-	183	1	Intergenic	novelGene_1782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAGAAAGAAAGAAAGAA	8482	False	NA	NA	False	NA	NA	NA	28308334	28308151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_28308200_28308300
Isoform_70148_3	chr7	+	234	1	Intergenic	novelGene_1783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAAACAAGTTA	NA	False	NA	NA	False	NA	NA	NA	28346998	28347232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_28347000_28347200
Isoform_70149_3	chr3	+	180	1	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAG	4717	False	NA	NA	False	NA	NA	NA	86229408	86229588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_+_86229400_86229600
Isoform_70157_5	chr7	+	1274	2	NNC	ENSMUSG00000037166.6	novel	755	4	NA	NA	0	-2333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	4003	False	NA	NA	False	NA	NA	NA	28988732	28990034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr7_+_28989678_28989705
Isoform_70158_14	chr11	-	183	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68055857	68055674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_68055700_68055900
Isoform_70159_20	chr7	+	752	1	ISM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	25	9928	0	-7138	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	29483447	29484199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_29483400_29484200
Isoform_70160_8	chr7	-	178	1	Intergenic	novelGene_1785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29612406	29612228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_29612200_29612400
Isoform_70161_3	chr7	-	180	1	Intergenic	novelGene_1786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	-2	True	NA	NA	NA	29661386	29661206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_29661200_29661400
Isoform_70162_3	chr7	-	357	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	109	-118	109	118	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	29664881	29664524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_29664500_29664900
Isoform_70163_8	chr17	-	208	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAGGTGGAATGT	NA	False	NA	NA	False	NA	NA	NA	57607398	57607190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr17_-_57607200_57607400
Isoform_70164_3	chr7	+	2835	1	ISM	ENSMUSG00000074221.13	ENSMUST00000146074.8	6867	9	40149	0	37675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29724872	29727707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_+_29724900_29727700
Isoform_70165_4	chr7	+	239	1	Intergenic	novelGene_1788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGAACATTAC	NA	False	NA	NA	False	NA	NA	NA	29752205	29752444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_29752200_29752400
Isoform_70167_3	chr7	+	214	1	Intergenic	novelGene_1789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGTTTCGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	29843801	29844015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_29843800_29844000
Isoform_70169_7	chr7	+	175	1	Intergenic	novelGene_1790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTAAAAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	29906039	29906214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_29906000_29906200
Isoform_70170_4	chr7	+	212	1	Intergenic	novelGene_1791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTTTGTTCCCCTAA	NA	False	NA	NA	False	NA	NA	NA	29907610	29907822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_29907600_29907800
Isoform_70172_96	chr7	-	950	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1536	4	1536	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTGTTGATTCTTTT	NA	False	NA	1	True	AATAAA	-32	NA	30021784	30020834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30020800_30021800
Isoform_70173_17	chr7	-	972	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1511	7	1511	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAATCTTGTTGATTCT	NA	False	NA	-2	True	AATAAA	-29	NA	30021809	30020837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_30020800_30021800
Isoform_70174_3	chr7	+	3307	1	NIC	ENSMUSG00000036931.16	novel	2014	12	NA	NA	4	-1220	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAGACAAAGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30121160	30124467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_+_30121200_30124500
Isoform_70175_23	chr7	+	2895	1	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAAAATGGT	NA	False	NA	NA	False	NA	NA	NA	4307298	4310193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_4307300_4310200
Isoform_70179_8	chr2	+	217	1	FSM	ENSMUSG00000070692.7	ENSMUST00000117447.2	399	1	198	-16	198	16	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATGCCTCACA	NA	False	NA	-5	True	AATAAA	-16	NA	122050671	122050888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr2_+_122050700_122050900
Isoform_70180_15	chr7	+	175	1	Intergenic	novelGene_1792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	4468	False	NA	NA	False	NA	NA	NA	30319308	30319483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_30319300_30319500
Isoform_70181_4	chr7	+	564	1	Intergenic	novelGene_1793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	30528750	30529314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_30528800_30529300
Isoform_70183_6	chr7	-	219	1	Antisense	novelGene_ENSMUSG00000097750.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8214	False	NA	NA	False	NA	NA	NA	30656778	30656559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_30656600_30656800
Isoform_70184_3	chr7	-	499	1	Antisense	novelGene_ENSMUSG00000097750.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7934	False	NA	NA	False	NA	NA	NA	30657058	30656559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_30656600_30657100
Isoform_70185_5	chr7	-	173	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAACCAAAAACAAAA	1346	False	NA	NA	False	NA	NA	NA	4634031	4633858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_4633900_4634000
Isoform_70187_13	chr5	-	177	1	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102772631	102772454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_102772500_102772600
Isoform_7019_54	chr11	-	2459	12	ISM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	29377	-1	-22	-1	3prime_fragment	FALSE	canonical	3	3497	junction_4	188.959482298225	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	1727	False	NA	-18	True	AATAAA	-14	NA	100385047	100367182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709
Isoform_70190_8	chr7	-	177	1	Intergenic	novelGene_1795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33882538	33882361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_33882400_33882500
Isoform_70192_3	chr7	-	174	1	Intergenic	novelGene_1796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	34705548	34705374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_34705400_34705500
Isoform_70193_4	chr7	-	4187	1	FSM	ENSMUSG00000108753.2	ENSMUST00000207013.2	617	1	-2956	-614	-2956	614	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGAATATAA	NA	False	NA	NA	False	NA	NA	NA	34755972	34751785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_34751800_34756000
Isoform_70195_449	chr7	+	878	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	-13	-70	-13	70	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAATTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	3230828	3231706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_3230800_3231700
Isoform_70196_6	chr7	+	2635	1	FSM	ENSMUSG00000034957.11	ENSMUST00000042985.11	2626	1	-10	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTGTCTTTTTAAAA	NA	False	NA	NA	False	TATAAA	-14	NA	34818717	34821352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_34818700_34821400
Isoform_70197_3	chr7	-	425	1	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGGGAGAGAAAGATGG	8720	False	NA	NA	False	NA	NA	NA	4744302	4743877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_4743900_4744300
Isoform_70198_3	chr7	-	984	1	FSM	ENSMUSG00000044452.11	ENSMUST00000206003.2	987	1	4	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAGGACCAG	NA	False	NA	NA	False	TTTAAA	-25	NA	35502424	35501440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_35501400_35502400
Isoform_702_16	chr10	-	1264	7	FSM	ENSMUSG00000019868.17	ENSMUST00000149485.2	753	7	-56	-455	-15	22	multi-exon	FALSE	canonical	3	56	junction_1	226.315168637799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581259	14531076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
Isoform_70202_35	chr7	-	1231	1	NIC	ENSMUSG00000051811.15	novel	585	3	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756022	4754791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr7_-_4754800_4756000
Isoform_70205_3	chr7	-	1539	1	Antisense	novelGene_ENSMUSG00000068959.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAATTGTAAATA	NA	False	NA	NA	False	AGTAAA	-10	NA	39167394	39165855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_39165900_39167400
Isoform_70206_3	chr7	-	1250	2	Genic_Genomic	ENSMUSG00000090744.8	novel	1430	4	NA	NA	5	2576	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGGTACTAGAT	NA	False	NA	NA	False	NA	NA	NA	41210248	41208948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_-_41209278_41209327
Isoform_70207_5	chr7	+	259	1	Intergenic	novelGene_1798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41597666	41597925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_41597700_41597900
Isoform_70208_4	chr7	-	262	1	Intergenic	novelGene_1797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	41564513	41564251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_41564300_41564500
Isoform_70209_8	chr7	+	195	1	Intergenic	novelGene_1799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTATGTCTAAT	NA	False	NA	NA	False	NA	NA	NA	41702242	41702437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_41702200_41702400
Isoform_70212_5	chr7	+	209	1	Intergenic	novelGene_1800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTATCCCTGGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	42141163	42141372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_42141200_42141400
Isoform_70213_3	chr7	-	1029	1	Genic_Genomic	ENSMUSG00000092416.3	novel	NA	NA	NA	NA	-9	-16234	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	42155173	42154144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_-_42154100_42155200
Isoform_70214_6	chr7	-	161	1	Intergenic	novelGene_1801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATTAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42306703	42306542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_42306500_42306700
Isoform_70215_3	chr7	-	204	1	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTCAGACATTCCTT	NA	False	NA	NA	False	NA	NA	NA	3234068	3233864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_3233900_3234100
Isoform_70217_11	chr7	-	1967	1	Intergenic	novelGene_1802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42452384	42450417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_42450400_42452400
Isoform_70220_9	chr7	-	3185	1	Genic_Genomic	ENSMUSG00000092225.2	novel	NA	NA	NA	NA	-26	-47247	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42516684	42513499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_-_42513500_42516700
Isoform_70221_4	chr7	+	1967	1	Intergenic	novelGene_1803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42658738	42660705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_42658700_42660700
Isoform_70223_3	chr7	-	171	1	Intergenic	novelGene_1804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATTTTTGAGACAA	NA	False	NA	-1	True	NA	NA	NA	42933761	42933590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_42933600_42933800
Isoform_70224_7	chr1	+	186	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143555806	143555992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_143555800_143556000
Isoform_70225_3	chr7	+	181	1	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	6093	False	NA	NA	False	NA	NA	NA	4819076	4819257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_4819100_4819300
Isoform_70226_19	chr7	-	2066	1	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	43296508	43294442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr7_-_43294400_43296500
Isoform_70227_3	chr7	-	176	1	Intergenic	novelGene_1805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAATCTGTG	1070	False	NA	NA	False	NA	NA	NA	43312189	43312013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_43312000_43312200
Isoform_70232_3	chr1	+	178	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132893811	132893989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_132893800_132894000
Isoform_70233_4	chr7	-	642	1	ISM	ENSMUSG00000004473.11	ENSMUST00000004587.11	2978	4	2007	1567	2007	-1567	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAAGTTGTCCTAGT	NA	False	NA	NA	False	CATAAA	-14	NA	43954319	43953677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr7_-_43953700_43954300
Isoform_70235_4	chr6	+	168	1	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAATAATAATT	949	False	NA	NA	False	NA	NA	NA	47546655	47546823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_47546700_47546800
Isoform_70237_3	chr7	-	267	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAACAAAATGA	NA	False	NA	NA	False	NA	NA	NA	4886713	4886446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_4886400_4886700
Isoform_70245_15	chr7	-	186	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	4887780	4887594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_4887600_4887800
Isoform_70246_13	chr7	-	180	1	Intergenic	novelGene_1806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGGAAAAAAAAAAGGATG	NA	False	NA	-10	True	NA	NA	NA	44585472	44585292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_44585300_44585500
Isoform_70247_3	chr7	-	1066	1	Genic_Genomic	ENSMUSG00000109324.3	novel	NA	NA	NA	NA	2316	1024	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAGAAAAAAAAAA	1485	False	NA	NA	False	NA	NA	NA	44625454	44624388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr7_-_44624400_44625500
Isoform_70249_6	chr7	+	685	1	FSM	ENSMUSG00000003184.16	ENSMUST00000209006.2	635	1	-47	-3	-8	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAACAGAAGA	NA	False	NA	NA	False	AATATA	-7	NA	44647063	44647748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_44647100_44647700
Isoform_70250_15	chr8	-	1122	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	35	1713	0	-1710	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTGCATGAGGT	NA	False	NA	-3	True	ATTAAA	-15	NA	3517645	3508817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
Isoform_70254_1443	chr8	-	2657	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	20	0	6	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1031	False	NA	-4	True	AATACA	-16	NA	3671296	3660086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
Isoform_70255_20	chr8	-	2803	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	-126	0	-126	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	885	False	NA	-4	True	AATACA	-16	NA	3671442	3660086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
Isoform_70258_12	chr8	-	374	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	21	-3	21	3	multi-exon	FALSE	canonical	3	78	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTCTTTCTATTAC	NA	False	NA	-1	True	AATACA	-18	NA	3722341	3721184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_3721397_3722179
Isoform_70259_3	chr8	-	2155	8	FSM	ENSMUSG00000051906.16	ENSMUST00000145007.8	1186	8	-969	0	-969	0	multi-exon	FALSE	canonical	1	1	junction_7	2.39045721866879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGTGTCCCATTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	4156804	4152786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4153250_4153621_4153735_4154101_4154254_4154484_4154572_4154822_4154892_4155270_4155355_4155465_4155547_4155698
Isoform_70261_243	chr8	-	1781	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	9	0	9	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325904	4309730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_70263_5	chr8	-	3064	12	FSM	ENSMUSG00000002949.16	ENSMUST00000149827.8	3041	12	-19	-4	9	4	multi-exon	FALSE	canonical	3	458	junction_4	34.7196564708602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGTTTGAAGTGTACCT	NA	False	NA	-9	True	AATAAA	-26	NA	4325904	4309726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_70264_4	chr8	-	3364	11	NIC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	4	3	intron_retention	FALSE	canonical	3	458	junction_4	35.296033771516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGGTTTGAAGTGTACC	NA	False	NA	-10	True	AATAAA	-25	NA	4325909	4309727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_70265_14	chr8	-	2096	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	148.130479270435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTTTGAAGTGTACCTCT	NA	False	NA	-7	True	AATAAA	-28	NA	4325905	4309724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
Isoform_70270_132	chr8	-	2499	8	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	192	junction_6	671.222856023973	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375097	4338343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885_4375006_4375029
Isoform_70274_1299	chr8	-	2424	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	625.804127148068	1299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTGTTTTGTTTTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	4375081	4338344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885_4375000_4375023
Isoform_70276_64	chr8	-	1289	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	336	4118	9	-1157	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAGTGTACAACTCAT	NA	False	NA	NA	False	AATAGA	-29	NA	4375077	4339499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
Isoform_70283_197	chr8	-	2147	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	8	1	5	-1	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGTGAAATGTGGAT	NA	False	NA	-6	True	TATAAA	-14	NA	4829546	4785976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_70284_3	chr8	-	1926	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-33	263	-20	-9	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCCGGATGAAGAAAA	NA	False	NA	NA	False	TATAAA	-25	NA	4829587	4786238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_70285_3	chr8	-	3769	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	8	-1621	5	1621	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTTCCTTATTCCTC	NA	False	NA	NA	False	AATAAA	-10	NA	4829546	4784354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_70286_5	chr8	-	2612	12	FSM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	3	-250	3	-4	multi-exon	FALSE	canonical	3	204	junction_8	40.3396734765956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTTGTGTGAAATGTG	NA	False	NA	-9	True	TATAAA	-11	NA	4829548	4785979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_70288_13	chr8	-	930	4	ISM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	-36	28381	-20	1	5prime_fragment	FALSE	canonical	3	272	junction_2	23.7205958328763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGTTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4829587	4814610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_4815090_4817906_4818023_4818143_4818312_4829420
Isoform_70291_9	chr8	-	1704	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-8	1501	-8	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5247	False	NA	-11	True	AATAAA	-35	NA	8740529	8716575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
Isoform_70294_4	chr8	-	2223	2	ISM	ENSMUSG00000040459.12	ENSMUST00000207817.2	970	5	-221	15107	-11	-14958	5prime_fragment	FALSE	canonical	3	891	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAATGACAGAA	5244	False	NA	NA	False	ATTAAA	-8	NA	8740532	8732306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_8733974_8739976
Isoform_70296_12	chr8	-	3228	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-27	1827	-27	1	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGCAAAAAAAAAAAAACCA	NA	False	NA	NA	False	ACTAAA	-8	NA	10026326	10020875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_10023808_10026030
Isoform_70297_3	chr8	-	5449	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	77	1089	-60	7	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTGCACTGATGTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	11362749	11249511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
Isoform_70298_3	chr8	-	912	13	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	64	42730	64	3210	5prime_fragment	FALSE	canonical	3	33	junction_10	8.21034239372648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGACTTTGCCCCAA	NA	False	NA	NA	False	NA	NA	NA	11362762	11291152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
Isoform_703_3	chr10	-	704	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	66	-2	-62	2	multi-exon	FALSE	canonical	2	9	junction_2	67	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17898900	17887009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_17887565_17894586_17894650_17898814
Isoform_70300_4	chr8	-	1215	9	ISM	ENSMUSG00000056228.11	ENSMUST00000210478.2	2007	15	20242	-1	-10113	1	3prime_fragment	FALSE	canonical	3	186	junction_7	21.2940719450273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAAGTGGGCCTATGC	NA	False	NA	-59	True	ATTAAA	-26	NA	11580499	11564019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294
Isoform_70301_206	chr8	-	1803	15	NIC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	153	junction_9	26.6340468006571	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAAGTGGGCCTATGC	NA	False	NA	-59	True	ATTAAA	-26	NA	11600730	11564019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
Isoform_70302_42	chr8	-	1786	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	73	43	-15	1	multi-exon	FALSE	canonical	3	35	junction_9	50.1547096288991	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAAGTGGGCCTATGC	NA	False	NA	-59	True	ATTAAA	-26	NA	11600710	11564019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
Isoform_70303_4	chr8	-	833	4	FSM	ENSMUSG00000056228.11	ENSMUST00000210845.2	826	4	1	-8	1	8	multi-exon	FALSE	canonical	3	13	junction_1	105.379736614251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	11600743	11596668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11597088_11597726_11597845_11600257_11600309_11600498
Isoform_70305_55	chr8	-	2316	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685073	11661583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
Isoform_70306_15	chr8	-	2350	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685107	11661583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
Isoform_70308_228	chr8	-	2395	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	3	0	3	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
Isoform_70313_14	chr8	-	2360	7	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	217.434281259112	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685066	11661582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11684810
Isoform_70314_56	chr8	-	2445	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	3	-1	3	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
Isoform_70317_17	chr8	-	2235	6	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	185.378531658874	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685103	11661582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11684810
Isoform_70319_716	chr8	-	2282	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	3	0	3	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685751	11661583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
Isoform_70321_18	chr8	-	2583	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	6	2567	3	813	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	11685751	11664149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
Isoform_70323_15	chr8	-	782	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3537	6	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	15.5897402159241	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGGGCTGTTTTATTTC	NA	False	NA	-2	True	AATAAA	-28	NA	11716141	11705471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712692_11715035_11715099_11715899
Isoform_70324_3	chr8	-	839	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3519	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	20.8173004974228	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATCTGATAGGGCTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	11716123	11705478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712774_11715035_11715099_11715899
Isoform_70325_3	chr8	-	673	5	NNC	ENSMUSG00000031509.11	novel	604	5	NA	NA	-3519	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.6376408140999	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATCTGATAGGGCTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	11716123	11705478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_11705682_11706108_11706190_11712589_11712692_11715035_11715099_11715899
Isoform_70327_5	chr8	-	3654	22	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	35.6240765484801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722111	12664278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705975_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_70328_181	chr8	-	3664	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	132	1	7	-1	multi-exon	TRUE	canonical	3	142	junction_11	12.9206544206397	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCATGTGGTTTCTGA	NA	False	NA	0	True	ATTAAA	-17	NA	12722116	12664277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_7033_916	chr11	-	4290	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	132	4	1	-1	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418694	100367182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_70332_3	chr8	-	3528	21	FSM	ENSMUSG00000000759.15	ENSMUST00000164774.8	3515	21	-18	5	6	-3	multi-exon	FALSE	canonical	3	10	junction_12	36.8876673157846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722117	12664281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_70333_3	chr8	-	4851	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	35.7078089365284	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722123	12664281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
Isoform_70336_11	chr8	-	1623	8	NIC	ENSMUSG00000038515.11	novel	1408	7	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	134.762678779537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGTGCTCATGGTAT	3640	False	NA	NA	False	NA	NA	NA	13250617	13222018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_70337_3	chr8	-	3504	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	13	-504	10	504	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTTGCCAGAAAGTG	3650	False	NA	NA	False	AGTAAA	-41	NA	13250607	13224657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_70338_147	chr8	-	1240	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	7	1766	4	1	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTGTTCTCCATTTT	3644	False	NA	-27	True	TTTAAA	-12	NA	13250613	13226927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_70339_48	chr8	-	1298	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	8	1707	5	1	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATGATCTTAGTTGGG	3645	False	NA	0	True	CATAAA	-18	NA	13250612	13226868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
Isoform_70341_11	chr8	-	2741	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	8	-1	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13337833	13305962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_70342_3	chr8	-	3052	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	-304	0	-14	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338145	13305963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_70343_5	chr8	-	2651	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	304	0	3	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13337827	13305963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_70344_9	chr8	-	2573	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	280	0	-4	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13337845	13305962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_70345_6	chr8	-	2857	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	-6	2	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGATGTCCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	13338131	13305964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
Isoform_70346_157	chr8	-	2575	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	-29	2	-29	-2	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTTGGTCACTGT	5731	False	NA	-1	True	AATAAA	-21	NA	13544519	13515375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
Isoform_70348_39	chr8	-	4114	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	20	270	20	-268	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13727583	13617217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
Isoform_7035_69	chr11	-	4321	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	101	4	-30	-1	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418725	100367182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_70350_6	chr8	-	3204	21	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-25	9530	-25	992	5prime_fragment	FALSE	canonical	3	48	junction_6	6.62947961758689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCACCGTTTTGTCT	NA	False	NA	NA	False	CATAAA	-15	NA	13727628	13626477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
Isoform_70351_164	chr8	-	767	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	19	7	19	-7	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACCTAGTATGCTCT	NA	False	NA	-15	True	AATAAA	-9	NA	13940249	13934800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_70352_40	chr8	-	1098	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	19	-324	19	324	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTACACTGTTGCTGT	NA	False	NA	NA	False	TTTAAA	-25	NA	13940249	13934469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_70353_46	chr8	-	802	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-13	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTAGTATGCTCTGTC	NA	False	NA	-12	True	AATAAA	-12	NA	13940281	13934797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_70354_12	chr8	-	1128	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-13	-322	0	322	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGTACACTGTTGCT	NA	False	NA	NA	False	TTTAAA	-23	NA	13940281	13934471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
Isoform_70355_4	chr8	-	551	3	NIC	ENSMUSG00000031458.9	novel	793	4	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACCTAGTATGCTCT	NA	False	NA	-15	True	AATAAA	-9	NA	13940249	13934800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_13935202_13937759_13937827_13940166
Isoform_70356_283	chr8	-	2409	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	54	0	20	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4834	False	NA	-4	True	ATTAAA	-18	NA	14024723	14002007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_70357_34	chr8	-	2648	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-185	0	70	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4595	False	NA	-4	True	ATTAAA	-18	NA	14024962	14002007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_70360_7	chr8	-	2778	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	54	-369	20	369	multi-exon	FALSE	canonical	3	271	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGAAAAAAATG	4834	False	NA	NA	False	NA	NA	NA	14024723	14001638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14004136_14005719_14005818_14024540
Isoform_70363_22	chr8	-	2476	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	1	-2104	1	-1	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4526	False	NA	-5	True	ATTAAA	-17	NA	14025031	14002008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
Isoform_70364_5	chr8	-	2510	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-7	0	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4518	False	NA	-4	True	ATTAAA	-18	NA	14025039	14002007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
Isoform_70365_5	chr8	-	2441	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-19	0	intron_retention	FALSE	canonical	3	17	junction_3	126.043202469982	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4506	False	NA	-4	True	ATTAAA	-18	NA	14025051	14002007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14025025
Isoform_70366_7	chr8	-	2309	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	-30	-1956	20	-2	multi-exon	FALSE	canonical	2	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGTGTATATT	4834	False	NA	-6	True	ATTAAA	-16	NA	14024723	14002009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14004136_14024540
Isoform_70367_4	chr8	-	3247	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-26	-1664	-26	1664	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGGTTTTTTTTTT	NA	False	NA	-10	True	NA	NA	NA	14140327	14075896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
Isoform_70369_48	chr8	-	1582	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-23	-2	-23	2	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTGTGATAAGATTAT	NA	False	NA	-4	True	AATAAA	-20	NA	14140324	14077558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
Isoform_70370_19	chr8	-	1618	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTGATAAGATTA	NA	False	NA	-5	True	AATAAA	-19	NA	14140297	14077559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
Isoform_70376_5	chr8	-	2994	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	-156	0	-156	0	multi-exon	TRUE	canonical	2	24	junction_4	7.05730511991338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19001147	18982744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_70377_27	chr8	-	2816	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	20	2	-18	1	multi-exon	FALSE	canonical	2	24	junction_4	7.05730511991338	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTAGTGTTAGTATC	NA	False	NA	-5	True	NA	NA	NA	19000971	18982746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
Isoform_70378_30	chr8	-	2030	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	-10	1	-10	-1	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTGTGCTGGTTTTCA	NA	False	NA	1	True	AATACA	-16	NA	22656438	22618299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
Isoform_70379_4	chr8	-	2031	16	FSM	ENSMUSG00000031478.17	ENSMUST00000110730.10	2050	16	13	6	-10	-3	multi-exon	FALSE	canonical	1	3	junction_4	9.555917305814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAACCGTGTGTGCTGGT	NA	False	NA	-4	True	AATACA	-11	NA	22656438	22618304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
Isoform_70380_60	chr8	-	2295	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	8	290	8	-5	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATTTCATTGATTGAC	NA	False	NA	-6	True	AATAAA	-21	NA	22675827	22658465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_70381_9	chr8	-	2583	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	15	-5	15	5	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATGAGAGTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	22675820	22658170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_70382_6	chr8	-	1840	6	ISM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	13	6461	13	-20	5prime_fragment	FALSE	canonical	3	249	junction_3	10.2683981223947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22675822	22664636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
Isoform_70384_142	chr8	-	3428	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	3	-1	3	1	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGTCGTAGTGTC	NA	False	NA	-5	True	NA	NA	NA	22888610	22865565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
Isoform_70389_13	chr8	-	954	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	59	389	32	-389	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTGGGGTAGTTTGC	NA	False	NA	-2	True	ATTAAA	-12	NA	22966839	22953019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_70390_6	chr8	-	984	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	29	389	2	-389	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTGGGGTAGTTTGC	NA	False	NA	-2	True	ATTAAA	-12	NA	22966869	22953019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_70391_8	chr8	-	1344	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	52	6	25	-6	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCTGCCTTGCATC	NA	False	NA	-7	True	NA	NA	NA	22966846	22952636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_70392_5	chr8	-	1408	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	-5	-1	-5	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	False	NA	0	True	NA	NA	NA	22966903	22952629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
Isoform_70395_4	chr8	-	853	3	NIC	ENSMUSG00000031534.16	novel	1402	4	NA	NA	8	-389	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	106.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTGGGGTAGTTTGC	NA	False	NA	-2	True	ATTAAA	-12	NA	22966863	22953019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_22953392_22963457_22963597_22966521
Isoform_70397_768	chr8	-	1352	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	1	1	1	-1	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCATCTGACTTCTTA	NA	False	NA	-12	True	AATAAA	-21	NA	23083773	23067102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
Isoform_70398_96	chr8	-	1383	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-30	1	25	-1	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCATCTGACTTCTTA	NA	False	NA	-12	True	AATAAA	-21	NA	23083804	23067102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
Isoform_704_99	chr10	-	752	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	92	2	22	2	multi-exon	FALSE	canonical	3	143	junction_1	12	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17898944	17887009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_17887565_17894586_17894654_17898814
Isoform_70405_142	chr8	-	1192	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	3	6	3	-6	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTGTCTTAACAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	23143431	23118147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
Isoform_70407_39	chr8	-	3561	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	19	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196575	23149227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_70409_12	chr8	-	4507	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	26	-556	0	0	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196579	23149227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_70410_11	chr8	-	2832	12	ISM	ENSMUSG00000031537.16	ENSMUST00000146212.8	4845	20	19	9790	0	-2136	5prime_fragment	FALSE	canonical	3	74	junction_1	13.6078489747281	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	23196575	23160162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
Isoform_70412_5	chr8	-	612	3	FSM	ENSMUSG00000031537.16	ENSMUST00000150214.2	601	3	-31	20	3	-20	multi-exon	FALSE	canonical	3	15	junction_1	54.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTTTAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	23196572	23192487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23192890_23196097_23196221_23196485
Isoform_70413_3	chr8	-	3418	9	FSM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	-7	6	-7	-6	multi-exon	FALSE	canonical	0	0	junction_8	7.29618907375624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGACTATGTCTGGTT	NA	False	NA	-7	True	AATAAA	-12	NA	23295627	23277375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295529
Isoform_70414_13	chr8	-	3385	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	-1	True	AATAAA	-18	NA	23295650	23277369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
Isoform_70417_264	chr8	-	3049	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-5	2474	-5	-2474	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTTAGGGACTTTGC	NA	False	NA	-24	True	AATAAA	-12	NA	23698367	23663754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
Isoform_70418_17	chr8	-	3153	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-109	2474	-109	-2474	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTTAGGGACTTTGC	NA	False	NA	-24	True	AATAAA	-12	NA	23698471	23663754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
Isoform_70419_9	chr8	-	3809	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-36	1745	-36	-1745	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCCTCTTGGGAACT	NA	False	NA	NA	False	AATAAA	-18	NA	23698398	23663025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
Isoform_70422_78	chr8	-	1151	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-12	210	-12	-210	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACTACTTACTGAG	NA	False	NA	-1	True	AATAAA	-26	NA	23727687	23716841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_70423_155	chr8	-	1129	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	210	10	-210	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACTACTTACTGAG	NA	False	NA	-1	True	AATAAA	-26	NA	23727665	23716841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_70424_14	chr8	-	1511	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	-172	10	172	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCTAACCAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	23727665	23716459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_70426_56	chr8	-	1331	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	8	10	-8	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATGTCTCAAATGT	NA	False	NA	-30	True	NA	NA	NA	23727665	23716639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
Isoform_70431_71	chr8	-	1940	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	6	-1	6	1	multi-exon	TRUE	canonical	3	1223	junction_2	41.2946727799119	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCCTCTCTTGTCTT	NA	False	NA	-25	True	AGTAAA	-11	NA	23747031	23731367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
Isoform_70433_310	chr8	-	1766	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	20	6	12	1	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCCTCTCTTGTCTT	NA	False	NA	-25	True	AGTAAA	-11	NA	23747070	23731367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
Isoform_70434_25	chr8	-	733	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	-6	1065	-6	-145	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAAAGCCATTTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	23747096	23732426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
Isoform_70435_10	chr8	-	3997	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.0462313449736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25506925	25439628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_70438_18	chr8	-	3926	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	58	1	-45	-1	multi-exon	TRUE	non_canonical	0	0	junction_2	31.0462313449736	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25506880	25439627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_70439_4	chr8	-	4106	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	-123	2	-118	-2	multi-exon	FALSE	non_canonical	0	0	junction_2	31.0462313449736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25507061	25439628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
Isoform_70441_30	chr8	-	3213	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	236	14	22	-14	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5847	False	NA	6	True	NA	NA	NA	25591765	25530869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
Isoform_70448_7	chr8	-	3249	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	217	1710	-5	-14	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9905	False	NA	6	True	NA	NA	NA	25592175	25530869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
Isoform_70449_3	chr8	-	2062	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	182	2932	-40	868	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGGAATCATGTCGTCC	9870	False	NA	NA	False	ATTAAA	-14	NA	25592210	25532091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
Isoform_70450_4	chr8	-	3061	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-38	4765	-38	-1588	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCAGTTTTACTGAAG	NA	False	NA	NA	False	NA	NA	NA	25691596	25649332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
Isoform_70451_5	chr8	-	2972	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	44	4772	44	-1595	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTATCAGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	25691514	25649339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
Isoform_70452_3	chr8	-	4570	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	44	3174	44	3	multi-exon	TRUE	canonical	0	0	junction_12	24.1986856851542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	25691514	25647741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
Isoform_70453_4	chr8	-	4315	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	-14	3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	23.0523257443196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	25730931	25647741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
Isoform_70455_9	chr8	-	3428	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-131	3174	-38	3	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	25691596	25647741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
Isoform_70456_16	chr8	-	3061	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	25730901	25647741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
Isoform_70459_5	chr8	-	4342	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	-99	3	34	-3	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCATGTGGCCTTATCT	NA	False	NA	-6	True	AATAAA	-19	NA	26244407	26215375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
Isoform_70460_8	chr8	-	4285	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244428	26215372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
Isoform_70462_43	chr8	-	2129	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	91	2656	2	2317	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGGACATTCTTTG	NA	False	NA	1	True	NA	NA	NA	26275224	26257221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_70464_29	chr8	-	4782	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	90	4	1	-4	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGCTGTTTTCTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	26275225	26254569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_70465_29	chr8	-	2157	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	66	2653	-23	2320	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACATTCTTTGCTT	NA	False	NA	4	True	NA	NA	NA	26275249	26257218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_70477_6	chr8	-	2209	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	60	2607	-29	2366	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTGCTTTCTTAAGAA	NA	False	NA	50	True	GATAAA	-10	NA	26275255	26257172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
Isoform_70478_4	chr8	-	902	2	FSM	ENSMUSG00000037316.10	ENSMUST00000209948.2	2506	2	-2	1606	-2	-1606	multi-exon	FALSE	canonical	3	405	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26275228	26266955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26267556_26274926
Isoform_7048_1341	chr11	-	4261	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	131	1	0	-1	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418695	100367182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_70488_126	chr8	-	2422	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	11	874	-6	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26330804	26306897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
Isoform_70494_1295	chr8	-	2307	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	35	-5	35	0	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCACTGGAAGTG	NA	False	NA	-7	True	AATAAA	-24	NA	26337687	26306898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
Isoform_70495_999	chr8	-	1885	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	7	445	7	-335	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGCTGCAGTACACTT	NA	False	NA	-5	True	TATAAA	-18	NA	26337715	26307348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
Isoform_70496_180	chr8	-	2341	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	2	-6	2	0	multi-exon	TRUE	canonical	3	3119	junction_12	186.058007680998	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26337720	26306897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
Isoform_7050_124	chr11	-	4307	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	85	1	-46	-1	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418741	100367182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
Isoform_70510_117	chr8	-	2503	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	1	190	1	-190	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGTTGTCTGATTT	NA	False	NA	-26	True	TATAAA	-16	NA	26466780	26434670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_70511_27	chr8	-	2688	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	1	5	1	-5	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCTCGTTACAGCTC	NA	False	NA	NA	False	AATATA	-15	NA	26466780	26434485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_70513_4	chr8	-	4675	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	1	-1982	1	1982	multi-exon	TRUE	canonical	3	85	junction_10	15.0390495171943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATGTGATTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	26466780	26432498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_70514_3	chr8	-	2176	13	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	15	8119	15	-7689	5prime_fragment	FALSE	canonical	3	85	junction_5	16.5344757669812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGTTTTTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-29	NA	26466766	26442599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_70516_79	chr8	-	2768	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	24	821	24	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484137	26471452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
Isoform_70518_8	chr8	-	3264	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	9	-823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	52.4404424085076	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTGTGGTGCTGGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	26484152	26471454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479769_26484114
Isoform_70520_479	chr8	-	1626	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	55	249	55	149	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTCCATAGTGTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	26505623	26488998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
Isoform_70525_12	chr8	-	2584	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	20	10232	20	-1	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCTTTGTATGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	26609232	26521680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
Isoform_70527_11	chr8	-	1458	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	-26	467	-26	374	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGACTCTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	27618734	27613858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_70528_12	chr8	-	1898	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	19	-18	-7	18	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTTTCTTTGGCAC	NA	False	NA	-8	True	TATAAA	-14	NA	27618689	27613373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_70530_23	chr8	-	1866	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	48	-15	0	15	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGTGTTTTCTTTGG	NA	False	NA	-11	True	TATAAA	-11	NA	27618660	27613376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
Isoform_70531_4	chr8	-	1818	4	FSM	ENSMUSG00000031487.6	ENSMUST00000210230.2	620	4	-44	-1154	-3	18	multi-exon	FALSE	canonical	2	6	junction_3	38.1255236758206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTTTCTTTGGCAC	NA	False	NA	-8	True	TATAAA	-14	NA	27618685	27613373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618524
Isoform_70532_5	chr8	-	2205	6	NIC	ENSMUSG00000031488.15	novel	3769	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.0242028187311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATCTCCCAGCGTTTTG	NA	False	NA	-4	True	NA	NA	NA	27664674	27633056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_27633423_27639063_27639123_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_70533_11	chr8	-	3709	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	3	4253	-2	2	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCCAGCGTTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	27664671	27633053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
Isoform_70534_4	chr8	-	5897	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	3	2065	-2	1120	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTCTGAAAATGTACAT	NA	False	NA	62	True	TATAAA	-16	NA	27664671	27630865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
Isoform_70535_25	chr8	-	4371	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	3	-1157	-2	1157	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGGGTTTTGGTTTGA	NA	False	NA	99	True	NA	NA	NA	27664671	27630828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_70536_115	chr8	-	2143	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	5	1069	0	1	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCAGCGTTTTGTT	NA	False	NA	-2	True	NA	NA	NA	27664669	27633054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
Isoform_70541_6	chr8	-	1379	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	28.2016547977833	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713822	27687486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
Isoform_70542_28	chr8	-	1601	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
Isoform_70543_13	chr8	-	2091	3	FSM	ENSMUSG00000031489.16	ENSMUST00000121838.2	1864	3	-2	-225	-2	0	multi-exon	FALSE	canonical	3	73	junction_1	27.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27718613	27715803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_27716498_27716753_27716822_27717284
Isoform_70548_5	chr8	-	2878	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	41.735356713463	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740901	27715803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
Isoform_70549_3	chr8	-	2537	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	48.5045100995773	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCCCTGCTCGCCTTT	NA	False	NA	-11	True	AATAAA	-16	NA	27730318	27715802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27730214
Isoform_70550_3	chr8	-	2333	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	48.2234382847179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAAGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	27730318	27716027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719334_27730214
Isoform_70551_242	chr8	-	1897	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	3	2	2	-2	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGGTCTTGAGAATTC	NA	False	NA	-4	True	TATAAA	-18	NA	31658789	31649492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
Isoform_70552_6	chr8	-	1954	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	-54	2	-54	-2	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGGTCTTGAGAATTC	NA	False	NA	-4	True	TATAAA	-18	NA	31658846	31649492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
Isoform_70553_8	chr8	-	2197	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	5	-300	4	300	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTCGTTTTGAGCCT	NA	False	NA	-8	True	TATAAA	-15	NA	31658787	31649190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
Isoform_70560_34	chr8	-	1636	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	4	1168	4	-1168	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTCTTAAGGTATCTT	4674	False	NA	-1	True	NA	NA	NA	34131991	34110781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_70561_47	chr8	-	1381	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	4	1423	4	-1423	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATGTGAACTGTCGT	4674	False	NA	0	True	AGTAAA	-24	NA	34131991	34111036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
Isoform_70563_30	chr8	-	2513	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	35	-1	0	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419834	34272670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70565_26	chr8	-	2584	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	-36	-1	-14	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419905	34272670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70566_153	chr8	-	1158	9	FSM	ENSMUSG00000031586.18	ENSMUST00000182987.8	1385	9	-56	283	-9	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419900	34274091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_7057_182	chr11	-	1780	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	550	0	2	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5932	False	NA	-21	True	AATAAA	-15	NA	100510444	100473643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_70572_138	chr8	-	2407	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	57	2	0	-1	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGATTTGTCTGACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	34419834	34272672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70573_302	chr8	-	988	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	57	1421	0	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419834	34274091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70574_15	chr8	-	2559	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-93	0	-93	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419984	34272670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70576_20	chr8	-	2476	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419901	34272670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70579_12	chr8	-	1165	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-123	1424	-123	-1	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAATTTTAAGAAATGTG	NA	False	NA	NA	False	AATAAA	-23	NA	34420014	34274094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_7058_4	chr11	-	1954	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	376	0	-133	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5758	False	NA	-21	True	AATAAA	-15	NA	100510618	100473643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_70580_71	chr8	-	1087	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-67	19	-9	-19	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGTCTCAAGTA	NA	False	NA	-26	True	AATAAA	-17	NA	34419900	34293985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70582_106	chr8	-	1021	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-1	19	0	-19	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGTCTCAAGTA	NA	False	NA	-26	True	AATAAA	-17	NA	34419834	34293985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
Isoform_70585_146	chr8	-	911	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	339	-1	6	1	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTGCCTCAATTTCCA	NA	False	NA	-2	True	AATAAA	-29	NA	34575611	34557575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
Isoform_70586_10	chr8	-	951	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	299	-1	-20	1	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTGCCTCAATTTCCA	NA	False	NA	-2	True	AATAAA	-29	NA	34575651	34557575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
Isoform_70587_27	chr8	-	2637	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	240	2	240	-2	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTAGCTTGTGGGTGTT	9026	False	NA	-6	True	AATAAA	-14	NA	34613947	34602727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
Isoform_70588_82	chr8	-	677	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	238	1964	238	-1964	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGGCTGGTTTCCCA	9024	False	NA	-6	True	ATTAAA	-19	NA	34613949	34604689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
Isoform_7059_27	chr11	-	1814	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	516	0	7	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5898	False	NA	-21	True	AATAAA	-15	NA	100510478	100473643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_70590_4	chr8	-	930	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	-15	1964	-15	-1964	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGGCTGGTTTCCCA	8771	False	NA	-6	True	ATTAAA	-19	NA	34614202	34604689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
Isoform_70592_6	chr8	-	6119	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	0	3044	0	1638	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAATAAATG	NA	False	NA	NA	False	AAAAAG	-14	NA	35432844	35296657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
Isoform_70593_7	chr8	-	2672	13	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	0	30327	0	-19032	5prime_fragment	FALSE	canonical	3	108	junction_5	17.2841851284796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTCCCCTTCCTCTC	NA	False	NA	-2	True	NA	NA	NA	35432844	35323940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
Isoform_70595_16	chr8	-	1002	3	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-2	91917	-2	2	5prime_fragment	FALSE	canonical	3	137	junction_2	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCCAGCGCTAGGAGG	NA	False	NA	NA	False	NA	NA	NA	35432846	35385530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_35385629_35407849_35408075_35432167
Isoform_70596_109	chr8	-	3092	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	1986	1	-1986	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATCTCATTGGCATTG	NA	False	NA	-11	True	ATTAAA	-20	NA	35962686	35934392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
Isoform_70598_53	chr8	-	4002	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	1076	1	-1076	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTTTCTTTCTCTCCA	NA	False	NA	-2	True	ATTAAA	-18	NA	35962686	35933482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
Isoform_70599_140	chr8	-	1583	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	3495	1	-3495	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTGAAAGGTAGTGTT	NA	False	NA	-8	True	ATTAAA	-22	NA	35962686	35935901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
Isoform_706_11	chr10	-	818	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	26	2	26	2	multi-exon	FALSE	canonical	3	143	junction_1	12	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTGGTGGCTGTGTT	NA	False	NA	-6	True	AATAAA	-20	NA	17899010	17887009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_17887565_17894586_17894654_17898814
Isoform_7060_5	chr11	-	2205	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	2	intron_retention	FALSE	canonical	3	2298	junction_7	236.358293815884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAATAAAAT	5932	False	NA	17	True	NA	NA	NA	100510444	100473675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_70608_10	chr8	-	3754	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	178	-2	178	2	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCCCCCTTTAAATCG	NA	False	NA	0	True	AATAAA	-17	NA	36716492	36683215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
Isoform_70610_4	chr8	-	3817	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	112	1	112	-1	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCCCCCCCCTTTAAA	NA	False	NA	-3	True	AATAAA	-14	NA	36716558	36683218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
Isoform_70611_11	chr8	-	2744	9	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	37	9283	-32	-4889	5prime_fragment	TRUE	canonical	3	12	junction_1	10.7985820828477	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATCAGATGCAAGGGG	NA	False	NA	NA	False	NA	NA	NA	37081060	37044187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_70612_3	chr8	-	3923	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	36	13198	-33	-8804	5prime_fragment	FALSE	canonical	3	26	junction_4	7.49933330370107	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAATCTAC	NA	False	NA	NA	False	NA	NA	NA	37081061	37048102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_70613_138	chr8	-	2600	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	14	1	14	-1	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGACTGATGGCT	NA	False	NA	-2	True	AATAAA	-22	NA	40964781	40945581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
Isoform_70618_6	chr8	-	2675	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	186.712271214889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964748	40945582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
Isoform_70619_4	chr8	-	1232	6	ISM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	14	3058	14	-1	5prime_fragment	FALSE	canonical	3	422	junction_1	71.4915379607964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACATTATTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	40964781	40948638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
Isoform_70620_27	chr8	-	745	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	-18	-1	14	1	multi-exon	FALSE	canonical	3	487	junction_2	66.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTTAGTTATAGAGAT	NA	False	NA	-3	True	AATAAA	-16	NA	40964781	40960357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_40960690_40963055_40963268_40964580
Isoform_70623_162	chr8	-	2501	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-13	0	0	0	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAATCATTTTAT	NA	False	NA	38	True	AATAAA	-23	NA	41087832	41004141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_70627_17	chr8	-	2536	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-48	0	-27	0	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAATCATTTTAT	NA	False	NA	38	True	AATAAA	-23	NA	41087867	41004141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_70628_44	chr8	-	3436	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	10	-958	-7	952	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAGTGTGAAAATTTT	NA	False	NA	0	True	AATAAA	-35	NA	41087809	41003183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
Isoform_70631_9	chr8	-	2354	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAATGTAATCATTTTA	NA	False	NA	37	True	AATAAA	-22	NA	41087809	41004142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
Isoform_70633_4	chr8	-	6068	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-24	504	-24	-366	multi-exon	TRUE	canonical	3	90	junction_13	16.5128603280297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGCAGCCTCTGACA	NA	False	NA	-3	True	AATAAA	-22	NA	41586787	41444454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_70634_6	chr8	-	4447	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-38	2139	-38	-2001	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTTCTTGTGATTTTT	NA	False	NA	-3	True	GATAAA	-33	NA	41586801	41446089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_70635_3	chr8	-	4472	9	ISM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-22	8840	-22	921	5prime_fragment	FALSE	canonical	3	90	junction_8	16.8300326797068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAACCCACAACA	NA	False	NA	NA	False	NA	NA	NA	41586785	41452790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
Isoform_70639_36	chr8	-	2184	14	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	76	junction_13	375.853820885935	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCAGTCATGCATGCT	7629	False	NA	-22	True	AATAAA	-17	NA	41827682	41793698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827542
Isoform_70640_964	chr8	-	2169	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	155	449	17	15	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGGGTGTGTGCCT	7656	False	NA	-6	True	AATAAA	-33	NA	41827655	41793682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
Isoform_70643_14	chr8	-	2648	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	124	1	-14	-1	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTTTTTTAAATAACT	7625	False	NA	NA	False	NA	NA	NA	41827686	41793234	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
Isoform_70644_16	chr8	-	2024	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	125	624	-13	-160	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCAATGTATTTATGAA	7626	False	NA	NA	False	AATATA	-17	NA	41827685	41793857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
Isoform_70652_62	chr8	-	1085	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-55	9	-55	-9	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTTTACAGAGTTCTC	NA	False	NA	-16	True	AATAAA	-14	NA	41870166	41850504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
Isoform_70653_70	chr8	-	1054	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-14	-1	-14	1	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTCTCGAGTCCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	41870125	41850494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
Isoform_70658_3	chr8	-	1438	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38786	-1	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	46.881647676771	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633309	43582844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43633233
Isoform_70659_4	chr8	-	1465	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38770	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	54.6308576927445	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633293	43582844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43618053_43618097_43633233
Isoform_7066_5	chr11	-	1044	5	FSM	ENSMUSG00000014195.17	ENSMUST00000154972.9	1049	5	2	3	2	-3	multi-exon	FALSE	canonical	3	33	junction_1	1222.31570696772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGCTCCTTTTGTT	5932	False	NA	NA	False	NA	NA	NA	100510444	100488255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100488881_100489440_100489555_100490010_100490136_100492553_100492643_100510353
Isoform_70668_113	chr8	-	1792	4	FSM	ENSMUSG00000051176.7	ENSMUST00000209356.2	1744	4	-52	4	-22	0	multi-exon	FALSE	canonical	3	204	junction_3	1933.09774426667	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760039	43748103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_43749574_43753664_43753743_43757512_43757595_43759877
Isoform_70674_2310	chr8	-	1794	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760039	43748103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
Isoform_70675_519	chr8	-	1824	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-53	1	-53	-1	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGAGTTCAATTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	43760070	43748104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
Isoform_7068_19	chr11	-	3234	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	-294	6	-2	-6	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6777	False	NA	-7	True	AATAAA	-12	NA	100603293	100595577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_70687_91	chr8	-	1828	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	1061	0	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_3	1920.37050823243	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43758912	43748103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758716
Isoform_70693_42	chr8	-	2016	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	2077.85207606316	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43759998	43748103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758716_43758980_43759877
Isoform_707_20	chr10	-	1185	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	3	2	3	-2	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTTTTCTGTTTAG	NA	False	NA	-2	True	AATAAA	-19	NA	18110741	18089425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_70710_9	chr8	-	920	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	0	7	0	2	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATTTCTGTGCATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	46452904	46449945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
Isoform_70711_14	chr8	-	711	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATTTCTGTGCATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	46452937	46449945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
Isoform_70718_2314	chr8	-	1120	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	548	3	-548	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCTTCATTGAGTA	NA	False	NA	-6	True	GATAAA	-26	NA	46664064	46660381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
Isoform_70719_1817	chr8	-	1295	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	373	3	-373	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCCTGCCCTTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	46664064	46660206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
Isoform_7072_850	chr11	-	3016	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	21	6	5	-6	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6800	False	NA	-7	True	AATAAA	-12	NA	100603270	100595577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_70724_47	chr8	-	1151	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	226	548	-28	-548	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCTTCATTGAGTA	NA	False	NA	-6	True	GATAAA	-26	NA	46664095	46660381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
Isoform_70729_4	chr8	-	2219	14	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-2	262	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	37.0480257641045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070245	47031635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
Isoform_70730_44	chr8	-	2078	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	17	-262	-9	262	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070226	47031635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_70731_5	chr8	-	2002	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-1	262	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	37.7258937012174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTATGCCTGGTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	47070248	47031635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
Isoform_70732_8	chr8	-	1862	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	1	260	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	35.2230984819148	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCTTATGCCTGGTG	NA	False	NA	-10	True	ATTAAA	-13	NA	47070246	47031637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
Isoform_70735_52	chr8	-	4311	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	8	13	8	0	multi-exon	TRUE	canonical	3	87	junction_18	20.4181612288351	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4062	False	NA	-10	True	AATAAA	-16	NA	47986494	47943162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
Isoform_70736_23	chr8	-	1467	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	1345	0	232	multi-exon	FALSE	canonical	3	212	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACCTTAATTTTCTGC	NA	False	NA	-12	True	ATTAAA	-17	NA	48128193	48121557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48122372_48127540
Isoform_70743_11	chr8	-	2626	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	20	166	20	-166	multi-exon	FALSE	canonical	3	212	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGTGTGACTTAGG	NA	False	NA	NA	False	AAAAAG	-23	NA	48128173	48120378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48122372_48127540
Isoform_70745_5	chr8	-	3385	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	2	6	2	-6	multi-exon	FALSE	canonical	3	65	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATCTTATTAGATGAT	NA	False	NA	NA	False	AATAAA	-12	NA	48166964	48162485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_70746_10	chr8	-	2668	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-58	783	-57	-783	multi-exon	FALSE	canonical	3	65	junction_1	31	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTGTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-25	NA	48167024	48163262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_70747_34	chr8	-	2609	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	2	782	2	-782	multi-exon	FALSE	canonical	3	65	junction_1	31	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48166964	48163261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48165330_48165922_48166054_48166554
Isoform_70749_13	chr8	-	2580	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	1	883	0	-782	multi-exon	FALSE	canonical	3	60	junction_1	33.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48166966	48163261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48165330_48165953_48166054_48166554
Isoform_7075_241	chr11	-	3020	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	21	5	5	-5	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6800	False	NA	-6	True	AATAAA	-13	NA	100603270	100595576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_70750_4	chr8	-	2667	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	-86	883	-86	-782	multi-exon	FALSE	canonical	3	60	junction_1	33.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTGTTTTTTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	48167053	48163261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48165330_48165953_48166054_48166554
Isoform_70752_45	chr8	-	4972	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	54	3652	54	-3652	multi-exon	TRUE	canonical	3	189	junction_17	22.8505746170765	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	48443532	48280645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_70753_113	chr8	-	4073	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	7	4598	7	-4598	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTCATCAGGTTTA	NA	False	NA	-16	True	AATATA	-29	NA	48443579	48281591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_70755_28	chr8	-	4094	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-16	4600	-16	-4600	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCAGTTTCATCAGGTT	NA	False	NA	-18	True	AATATA	-27	NA	48443602	48281593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_70761_9	chr8	-	5034	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-8	3652	-8	-3652	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	48443594	48280645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
Isoform_70762_6	chr8	-	3790	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	8	-4599	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTTTCATCAGGTTT	NA	False	NA	-17	True	AATATA	-28	NA	48443578	48281592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
Isoform_70764_5	chr8	-	1226	8	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	135942	-4592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.9723982686778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCAGGTTTATTTGTA	NA	False	NA	-10	True	AATATA	-35	NA	48307644	48281585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48307587
Isoform_70766_4	chr8	-	1234	8	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	135935	-4596	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	86.9447396632024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTCATCAGGTTTATT	NA	False	NA	-14	True	AATATA	-31	NA	48307651	48281589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48307582
Isoform_70768_45	chr8	-	2204	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	49	0	49	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092051	54039901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
Isoform_70769_6	chr8	-	3448	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAGGTTTATGTGTTT	NA	False	NA	-6	True	AATAAA	-36	NA	54983017	54973469	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
Isoform_7077_14	chr11	-	3103	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	5	-6	intron_retention	FALSE	canonical	3	387	junction_11	56.9428167111533	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6800	False	NA	-7	True	AATAAA	-12	NA	100603270	100595577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
Isoform_70770_4	chr8	-	2187	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	38	junction_10	43.2676553559353	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGTGCCGATTTTCT	NA	False	NA	-3	True	AATAAA	-20	NA	57003905	56984554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097
Isoform_70771_6	chr8	-	1615	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	54.5031654247927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003903	56984558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003722
Isoform_70772_12	chr8	-	1653	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	39	-2	-15	2	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGTGCCGATTTTCT	NA	False	NA	-3	True	AATAAA	-20	NA	57003853	56984554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
Isoform_70773_13	chr8	-	1554	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGTATATGTGCCGAT	NA	False	NA	-8	True	AATAAA	-15	NA	57003902	56984559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
Isoform_70777_2429	chr8	-	1161	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	20	-3	20	3	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	2429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTCAGCCTGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	57940874	57935737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
Isoform_70778_128	chr8	-	1196	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	-17	-1	-17	1	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	98	True	AATAAA	-15	NA	57940911	57935739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
Isoform_70785_6	chr8	-	4329	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-15	-1	-14	1	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106080	57976860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_70786_12	chr8	-	3447	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-5	871	-4	1	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAGCA	NA	False	NA	NA	False	GATAAA	-20	NA	58106070	57977732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_70787_15	chr8	-	3445	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-31	-1	-2	1	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAGCA	NA	False	NA	NA	False	GATAAA	-20	NA	58106068	57977732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_70788_8	chr8	-	4355	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-67	-875	-38	3	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAGTGCTTGTAATT	NA	False	NA	0	True	AATAAA	-21	NA	58106104	57976858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
Isoform_70791_3	chr8	-	5536	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTGGTTTGGCTT	NA	False	NA	-10	True	ATTAAA	-9	NA	61436285	61363431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
Isoform_70794_3	chr8	-	5699	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-74	-1526	-13	-8	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTGTGGTTTGGCTTT	NA	False	NA	-9	True	ATTAAA	-10	NA	61436347	61363430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
Isoform_70799_7	chr8	-	5529	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	-13	2	-13	-2	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGCTTTTAATTG	NA	False	NA	-3	True	ATTAAA	-16	NA	61436347	61363424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
Isoform_708_8	chr10	-	881	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	1374	0	-1374	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAGGGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	18110726	18093905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_70801_7	chr8	-	872	3	FSM	ENSMUSG00000004319.16	ENSMUST00000145493.2	3462	3	-27	2617	-13	-2617	multi-exon	FALSE	canonical	3	96	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTTTCAGCATTTT	NA	False	NA	NA	False	NA	NA	NA	61436347	61394290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_61394449_61428765_61428942_61435809
Isoform_70806_3	chr8	-	3276	8	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	57494	-3	193	3	3prime_fragment	FALSE	canonical	3	101	junction_4	7.79848232226067	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGCCCTCTGTGATGTT	NA	False	NA	-5	True	AATAAA	-20	NA	61986682	61964463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387
Isoform_70814_37	chr8	-	2097	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	-1	21	-1	-21	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65146089	65045596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
Isoform_70816_212	chr8	-	1828	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	214	2	0	-2	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAATGGTTCTGTTTTTT	NA	False	NA	-19	True	ATTAAA	-16	NA	65186612	65171174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
Isoform_70817_6	chr8	-	1678	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	300.648777645944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAATGGTTCTGTTTTT	NA	False	NA	-20	True	ATTAAA	-15	NA	65186612	65171175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_65172216_65173375_65173531_65175497_65175625_65180657_65180943_65186541
Isoform_70819_4	chr8	-	2309	2	FSM	ENSMUSG00000031604.11	ENSMUST00000135943.8	2969	2	-30	690	0	-690	multi-exon	FALSE	canonical	3	754	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTGAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	65186612	65178704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65180943_65186541
Isoform_7082_173	chr11	-	1600	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	58	257	19	-255	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100628983	100606091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_70821_3	chr8	-	3290	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	121	1	28	-1	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTGGGAGTTGTTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	65302548	65192709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
Isoform_70822_6	chr8	-	3102	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	134	176	41	-3	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCCTTGGTTTTACCAGT	NA	False	NA	-5	True	AATAAA	-25	NA	65302535	65192884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
Isoform_70823_132	chr8	-	936	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	12	-3	12	0	multi-exon	FALSE	canonical	3	429	junction_2	5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489812	65481068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65481644_65488316_65488407_65489541
Isoform_70824_39	chr8	-	1009	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-61	-3	-61	0	multi-exon	FALSE	canonical	3	429	junction_2	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489885	65481068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_65481644_65488316_65488407_65489541
Isoform_70826_232	chr8	-	1000	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-6	3334	-4	-2122	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTAAGAATTTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	66939177	66929103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
Isoform_70827_29	chr8	-	1102	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-6	3232	-4	-2020	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGAGATTGTGTTAG	NA	False	NA	90	True	AATAGA	-42	NA	66939177	66929001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
Isoform_70829_33	chr8	-	1057	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-27	2120	-3	-2120	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTAAGAATTTGCTAT	NA	False	NA	-10	True	AATAAA	-20	NA	66939176	66929101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
Isoform_7083_46	chr11	-	1878	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	37	0	-2	0	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	100629004	100605834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_70830_9	chr8	-	1160	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	2014	0	-2014	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATTGTGTTAGTCTGCT	NA	False	NA	96	True	TTTAAA	-16	NA	66939173	66928995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
Isoform_70832_13	chr8	-	2523	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2118	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAGAATTTGCTATTG	NA	False	NA	-8	True	AATAAA	-22	NA	66939182	66929099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
Isoform_70835_3	chr8	-	613	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-22	7077	-5	-59	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATGAAAAAGATCATA	NA	False	NA	NA	False	NA	NA	NA	69848196	69826238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
Isoform_70836_39	chr8	-	2267	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-1	-7	-1	7	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGTACTCATTTCTT	NA	False	NA	1	True	AATAAA	-30	NA	70078200	70063500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
Isoform_70837_35	chr8	-	2457	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	5	-203	2	203	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	-25	True	NA	NA	NA	70078194	70063304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
Isoform_70838_4	chr8	-	3122	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238460.2	882	5	20	-2260	-3	-2	multi-exon	FALSE	canonical	2	4	junction_4	33.4542598184446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169116	70157791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169034
Isoform_70839_35	chr8	-	3182	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	-7	5	-7	-2	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169559	70157791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
Isoform_70841_3	chr8	-	5744	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	16	-2515	16	-2	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCTGCACTTGTGTCAA	6885	False	NA	-11	True	NA	NA	NA	70227545	70213977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
Isoform_70843_21	chr8	-	2083	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	-668	-16	-668	16	intron_retention	FALSE	canonical	3	6124	junction_2	115.905133622286	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTATCGTGGATCCTTAA	NA	False	NA	-4	True	AATAAA	-33	NA	70355876	70346813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
Isoform_70845_1365	chr8	-	478	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	914	7	914	-7	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	1365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGTTGACTCTATA	NA	False	NA	-27	True	AATAAA	-10	NA	70354294	70346836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
Isoform_70846_312	chr8	-	501	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	891	7	891	-7	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGTTGACTCTATA	NA	False	NA	-27	True	AATAAA	-10	NA	70354317	70346836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
Isoform_70853_12	chr8	-	3359	13	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	122	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	333.513492980419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448761	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70854_10	chr8	-	3496	13	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	333.513492980419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448898	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70862_19	chr8	-	3241	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	122	0	122	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426799	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
Isoform_70863_188	chr8	-	3577	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	46	-1	46	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448988	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70864_56	chr8	-	3622	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	1	-1	1	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449033	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70874_11	chr8	-	3529	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	319.205107769983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449042	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
Isoform_70876_11	chr8	-	3267	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	103	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	319.205107769983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448780	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
Isoform_7088_4	chr11	-	1765	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	-13	163	-13	-161	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAATGGCTCTACTCCCT	NA	False	NA	-32	True	AATGAA	-13	NA	100629054	100605997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_70882_29	chr8	-	3627	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	1	184	1	2	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTGTGTGGAAATCCT	NA	False	NA	-22	True	AATAAA	-19	NA	70449033	70361303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70889_18	chr8	-	3502	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448988	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70891_21	chr8	-	3292	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	105	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448778	70361305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
Isoform_70899_80	chr8	-	2893	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	39	-1001	0	3	multi-exon	FALSE	canonical	3	104	junction_6	54.8951019875382	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATGTTAGAGTGCT	NA	False	NA	-2	True	NA	NA	NA	70495345	70471212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_709_4	chr10	-	2109	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	146	0	-146	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTTATGAAGATGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	18110726	18092677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
Isoform_7090_8	chr11	-	2613	5	NIC	ENSMUSG00000019173.12	novel	1967	6	NA	NA	-3	-254	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCTTCCTCGTCCTTC	NA	False	NA	0	True	AATATA	-24	NA	100629005	100606090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_70902_131	chr8	-	2895	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	34	2440	0	3	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATGTTAGAGTGCT	NA	False	NA	-2	True	NA	NA	NA	70495350	70471212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70903_5	chr8	-	4257	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	12	1100	12	-1100	multi-exon	TRUE	canonical	3	161	junction_6	45.5936155374607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	70495372	70469872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70904_4	chr8	-	2987	20	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	95.7466358811028	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495350	70471216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481651_70481748_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70905_3	chr8	-	3301	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	2	-21	intron_retention	FALSE	canonical	3	161	junction_6	43.9600321777151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGACCTCTCGACTTG	NA	False	NA	-27	True	NA	NA	NA	70495348	70471237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70906_4	chr8	-	1663	13	FSM	ENSMUSG00000031858.17	ENSMUST00000212055.2	1711	13	5	43	0	-43	multi-exon	FALSE	canonical	3	216	junction_7	40.0696442321228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATCTCAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	70495345	70475933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70907_8	chr8	-	2109	12	ISM	ENSMUSG00000031858.17	ENSMUST00000212401.2	4269	17	-8	4718	-8	-43	5prime_fragment	FALSE	canonical	3	224	junction_7	36.158740927396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATCTCAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	70495358	70475933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
Isoform_70908_4	chr8	-	1256	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-139	4	-81	-4	multi-exon	FALSE	canonical	2	7	junction_5	20.7590341779188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCAGGGTGCCT	9464	False	NA	-2	True	AATAAA	-14	NA	70591885	70585919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_70909_4	chr8	-	3693	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-72	-12	-72	0	multi-exon	TRUE	canonical	3	42	junction_5	11.7626261948597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGTTTTGCTTGAGT	9473	False	NA	0	True	ATTAAA	-34	NA	70591876	70583443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_7091_4	chr11	-	2856	5	NIC	ENSMUSG00000019173.12	novel	1967	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGATTGTTGGTGT	NA	False	NA	-12	True	ATTAAA	-15	NA	100628994	100605836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
Isoform_70911_28	chr8	-	1232	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-84	2461	-84	-1	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTCAGGGTGCCTCCC	9461	False	NA	1	True	AATAAA	-17	NA	70591888	70585916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
Isoform_70916_12	chr8	-	2026	8	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	19	-16	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	30.2722341967901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	5027	False	NA	-42	True	NA	NA	NA	70686757	70672863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686595
Isoform_70917_94	chr8	-	2204	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	17	42	0	-16	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	4685	False	NA	-42	True	NA	NA	NA	70687099	70672863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
Isoform_70919_5	chr8	-	1371	5	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	30	3258	13	-244	5prime_fragment	FALSE	canonical	3	75	junction_4	11.8822346383161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGGGTCGTGGTTCTTT	4698	False	NA	NA	False	AATGAA	-17	NA	70687086	70676079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
Isoform_70921_42	chr8	-	2119	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	0	-8	0	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAATCCAATAGCTAC	9949	False	NA	-24	True	NA	NA	NA	70755121	70745515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
Isoform_70922_173	chr8	-	1534	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	585	-8	135	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
Isoform_70925_6	chr8	-	4632	25	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-32	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	163.15081213405	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTTGCGTGGGGCGG	NA	False	NA	-26	True	AATAAA	-17	NA	70805960	70784171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427_70805815_70805835
Isoform_70927_38	chr8	-	4584	25	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.665294110998	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTCCCTGCTTTTGCGT	NA	False	NA	-33	True	AATAAA	-10	NA	70805952	70784178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427_70805815_70805835
Isoform_70928_6	chr8	-	3870	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-26	-861	intron_retention	FALSE	non_canonical	0	0	junction_23	119.404999372875	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAAACTGAAGCACCACT	NA	False	NA	NA	False	AATAAA	-33	NA	70805954	70785035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427_70805838_70805857
Isoform_70929_14	chr8	-	2546	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-50	3187	-50	-3187	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	5163	False	NA	NA	False	AATAAA	-16	NA	70892279	70838191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
Isoform_70930_3	chr8	-	2911	3	FSM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	24	39	-20	2	multi-exon	FALSE	canonical	2	11	junction_1	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGCAGACCTGTGCTCT	NA	False	NA	-16	True	AATAAA	-18	NA	70929575	70902915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70905568_70908115_70908299_70929499
Isoform_70931_81	chr8	-	3097	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-58	-48	5	-1	multi-exon	FALSE	canonical	3	54	junction_2	2	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGTGACCTGTGCCA	NA	False	NA	30	True	NA	NA	NA	70929613	70902869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70905670_70908115_70908299_70929499
Isoform_70936_10	chr8	-	2878	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	40	-184	21	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGACCTGTGCC	NA	False	NA	29	True	NA	NA	NA	70929578	70902870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70905670_70929499
Isoform_70937_10	chr8	-	2863	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	9	-138	-9	1	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGCAGACCTGTGCTC	NA	False	NA	-17	True	AATAAA	-17	NA	70929609	70902916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70905670_70929499
Isoform_70938_3	chr8	-	2678	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	-20	76	-20	-76	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTTGTTTAATTTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	70929638	70903130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70905670_70929499
Isoform_70939_19	chr8	-	665	3	FSM	ENSMUSG00000058833.12	ENSMUST00000138196.2	542	3	-20	-103	-16	0	multi-exon	FALSE	canonical	3	841	junction_1	23	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70958778	70956944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70957160_70957633_70957711_70958405
Isoform_7094_11	chr11	-	2238	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	11	213	-4	-213	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	100661772	100657070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
Isoform_70942_36	chr8	-	598	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	34	0	34	0	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959042	70956944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
Isoform_70945_879	chr8	-	658	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	13	0	-2	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
Isoform_70947_20	chr8	-	581	4	NIC	ENSMUSG00000058833.12	novel	671	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	348.934887272046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70957160_70958405_70958611_70959146_70959230_70959311
Isoform_70949_22	chr8	-	677	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	-2	-4	-2	0	multi-exon	FALSE	canonical	3	28	junction_1	340.250918441082	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959389	70956944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
Isoform_70956_333	chr8	-	493	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	50	-2	12	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963017	70960913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
Isoform_70957_98	chr8	-	521	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	22	-2	-16	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963045	70960913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
Isoform_70958_182	chr8	-	680	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	24	1	19	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70962981	70960913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
Isoform_7096_18	chr11	-	4909	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	152	1	-34	-1	multi-exon	TRUE	canonical	3	41	junction_6	7.16386680880661	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGTCCTGTTTCCTT	NA	False	NA	-1	True	AATAAA	-20	NA	100741398	100671557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
Isoform_70960_2594	chr8	-	496	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	214	1	12	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	2594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963017	70960913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
Isoform_70961_725	chr8	-	546	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	164	1	0	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963067	70960913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
Isoform_70967_177	chr8	-	1133	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	82	1	6	-1	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTATAGCAACAGTGGC	NA	False	NA	-14	True	AATAAA	-19	NA	70975748	70966046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
Isoform_70968_14	chr8	-	1207	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	6	3	6	-3	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70975824	70966048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
Isoform_7097_35	chr11	-	4377	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-47	1712	28	0	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830277	100777635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_70970_10	chr8	-	1428	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	284.550852221532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70980627	70966048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70980294
Isoform_70971_3	chr8	-	1007	4	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-14	6	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	220.568961249462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAACAGTGGCTTGCTTC	NA	False	NA	-7	True	AATAAA	-26	NA	70975768	70966039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70966819_70968044_70968092_70972586_70972712_70975712
Isoform_70972_27	chr8	-	1592	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	351.765524710708	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060965	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70973_13	chr8	-	1675	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_1	344.430828404711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70975_291	chr8	-	1475	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	289.200298236361	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70977_14	chr8	-	1529	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	-54	0	-54	0	multi-exon	FALSE	canonical	3	428	junction_1	289.200298236361	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71061018	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70982_122	chr8	-	1558	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	TRUE	canonical	3	428	junction_1	272.959695844562	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060963	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70986_195	chr8	-	1719	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	751	junction_3	214.93682792858	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70988_19	chr8	-	1747	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	751	junction_3	214.93682792858	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060992	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70993_27	chr8	-	1831	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060992	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70994_132	chr8	-	1803	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_70999_11	chr8	-	1888	14	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_2	167.345795837886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
Isoform_710_6	chr10	-	1116	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	152	1267	-37	-7	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAACTTTCCTTGCCTC	NA	False	NA	NA	False	AGTAAA	-15	NA	18421672	18416512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
Isoform_71000_17	chr8	-	2068	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	-523	0	-162	0	multi-exon	FALSE	canonical	3	308	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	492	False	NA	-6	True	AATAAA	-18	NA	71085268	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71082825_71083982
Isoform_71001_66	chr8	-	1085	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	460	0	460	0	multi-exon	FALSE	canonical	3	308	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1475	False	NA	-6	True	AATAAA	-18	NA	71084285	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71082825_71083982
Isoform_71004_19	chr8	-	1305	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	76	-1	76	0	multi-exon	FALSE	canonical	3	72	junction_2	118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	730	False	NA	-6	True	AATAAA	-18	NA	71085030	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71082825_71083982_71084275_71084799
Isoform_71005_4	chr8	-	1554	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	-173	-1	-173	0	multi-exon	FALSE	canonical	3	72	junction_2	118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	481	False	NA	-6	True	AATAAA	-18	NA	71085279	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71082825_71083982_71084275_71084799
Isoform_71006_4	chr8	-	1475	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-6431	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	126.533263083929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCGTCTCAGTGACCT	NA	False	NA	-8	True	AATAAA	-16	NA	71091537	71082044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71091364
Isoform_71007_5	chr8	-	1418	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	128.073763468124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	505	False	NA	-6	True	AATAAA	-18	NA	71085255	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085141
Isoform_71008_11	chr8	-	1944	3	NNC	ENSMUSG00000038508.8	novel	1545	2	NA	NA	-168	0	intron_retention	FALSE	canonical	3	33	junction_2	137.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	486	False	NA	-6	True	AATAAA	-18	NA	71085274	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71085030_71085159
Isoform_71010_7	chr8	-	1497	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	115.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	505	False	NA	-6	True	AATAAA	-18	NA	71085255	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71084242_71084799
Isoform_71012_15	chr8	-	1380	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	120.610484158256	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	492	False	NA	-6	True	AATAAA	-18	NA	71085268	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085159
Isoform_71013_5	chr8	-	1431	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-6418	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	125.762562880303	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	71091524	71082042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71091364
Isoform_71014_7	chr8	-	4862	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	21	0	21	0	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112367	71099084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_71016_10	chr8	-	2208	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	34	2641	34	1102	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGTGGTTGGCTCTC	NA	False	NA	-6	True	NA	NA	NA	71112354	71101725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_71019_17	chr8	-	1418	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	19	3446	19	297	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGGGTATTTGTTGTT	NA	False	NA	-12	True	NA	NA	NA	71112369	71102530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
Isoform_71024_11	chr8	-	964	5	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	275.415141195977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213581	71211295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213181_71213365
Isoform_71025_223	chr8	-	994	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-15	1	-15	-1	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213607	71211295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
Isoform_71026_557	chr8	-	968	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	11	1	11	-1	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213581	71211295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
Isoform_7103_249	chr11	-	4425	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	91	0	30	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830275	100777635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_71031_58	chr8	-	1009	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGCGTGTGGGTGGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	71213581	71211295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
Isoform_71034_20	chr8	-	1025	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	-44	-1	-44	1	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219351	71215417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
Isoform_71035_38	chr8	-	981	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	0	-1	0	1	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTCCTAGAGTTGG	NA	False	NA	-14	True	AATAAA	-19	NA	71219307	71215417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
Isoform_71036_9	chr8	-	1048	3	FSM	ENSMUSG00000031834.16	ENSMUST00000146707.2	746	3	166	-468	-110	4	multi-exon	FALSE	canonical	3	190	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGGGGACTGGAATT	NA	False	NA	-4	True	NA	NA	NA	71222142	71220815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71221542_71221705_71221877_71221991
Isoform_71037_8	chr8	-	3235	17	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	55.5444290073271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229334	71220822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225561_71227299_71227997_71229250
Isoform_71038_6	chr8	-	3297	17	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-3	-4	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_15	55.5444290073271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTGTCTTTGGGGA	NA	False	NA	-12	True	NA	NA	NA	71229360	71220823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225598_71227299_71227997_71229250
Isoform_71040_423	chr8	-	3155	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	10	0	10	0	multi-exon	TRUE	canonical	3	127	junction_15	21.8259784049498	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	False	NA	-8	True	NA	NA	NA	71229347	71220819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
Isoform_71042_6	chr8	-	2218	3	NNC	ENSMUSG00000031834.16	novel	626	3	NA	NA	-11	-857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGATACTCCAGT	NA	False	NA	NA	False	NA	NA	NA	71229368	71225874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71226097_71226118_71227997_71229250
Isoform_71043_4	chr8	-	1931	7	ISM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	506	0	304	0	intron_retention	FALSE	canonical	0	0	junction_5	38.4476556141232	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	-1	True	AATAAA	-20	NA	71291858	71287772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622
Isoform_71045_5	chr8	-	2896	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	20	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	8.14612638006556	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGATTCTGGTGAA	NA	False	NA	-9	True	AATAAA	-13	NA	71309632	71295809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_71046_4	chr8	-	1956	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	29	-166	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTTGACATGCAGG	NA	False	NA	NA	False	AGTAAA	-18	NA	71309623	71296715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_71047_4	chr8	-	2870	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	21	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGATTCTGGTGAA	NA	False	NA	-9	True	AATAAA	-13	NA	71309631	71295809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
Isoform_71049_318	chr8	-	912	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	445	-1	-107	1	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	71326134	71320869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
Isoform_71060_8210	chr8	-	603	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	657	0	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	8210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
Isoform_71067_113	chr8	-	809	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-14	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
Isoform_71069_5	chr8	-	1583	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	-130	-1	-28	1	multi-exon	FALSE	canonical	3	71	junction_7	129.467524885587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	566	False	NA	-8	True	NA	NA	NA	71725150	71703767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_7107_17	chr11	-	4451	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	63	2	2	-2	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCAGTGGGGGCTGGCT	NA	False	NA	-6	True	AATAAA	-17	NA	100830303	100777637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_71071_5	chr8	-	2106	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	433	-526	-23	526	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTGCTTCTTGGTCAT	571	False	NA	-5	True	NA	NA	NA	71725145	71703242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_71072_92	chr8	-	1585	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	429	-1	-27	1	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	567	False	NA	-8	True	NA	NA	NA	71725149	71703767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
Isoform_71073_4	chr8	-	1523	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	153.13787864713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	567	False	NA	-11	True	NA	NA	NA	71725149	71703770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
Isoform_71076_325	chr8	-	2227	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	-10	1	-10	-1	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTCAGCCTCTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	71834614	71826771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
Isoform_71081_6	chr8	-	3186	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	25	-1	intron_retention	FALSE	canonical	3	125	junction_1	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTCAGCCTCTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	71834579	71826771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71828918_71831032_71831128_71833634
Isoform_71082_88	chr8	-	1967	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	9	2	9	-2	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCCTCCAATTTGTGA	NA	False	NA	-8	True	NA	NA	NA	71916290	71909350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
Isoform_71083_4	chr8	-	3746	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-90	-3	-90	3	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938697	71928659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
Isoform_71084_4	chr8	-	3655	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-8	6	-8	-6	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGTGCTCGAGGTCAG	NA	False	NA	-27	True	AATAAA	-10	NA	71938615	71928668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
Isoform_71085_25	chr8	-	786	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	-2	8	-2	-8	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGAGCTTGCTTCT	NA	False	NA	NA	False	AATAAA	-9	NA	71990102	71986906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
Isoform_71087_16	chr8	-	921	8	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGTGTTATATATAAC	NA	False	NA	-3	True	NA	NA	NA	72124383	72112990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
Isoform_71095_42	chr8	-	2645	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-46	456	-46	-456	multi-exon	FALSE	canonical	3	105	junction_2	27	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8475	False	NA	-5	True	NA	NA	NA	72154479	72143855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_71096_11	chr8	-	3381	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-13	-313	-13	313	multi-exon	FALSE	canonical	3	105	junction_2	27	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTGGATTGTTGCAAT	8508	False	NA	-2	True	AATAAA	-17	NA	72154446	72143086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_71097_147	chr8	-	2612	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-13	456	-13	-456	multi-exon	FALSE	canonical	3	105	junction_2	27	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8508	False	NA	-5	True	NA	NA	NA	72154446	72143855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_711_9	chr10	-	1875	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	28	6196	-10	693	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCTGTTGAGCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	19783407	19735841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
Isoform_71100_20	chr8	-	2761	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-162	456	-162	-456	multi-exon	FALSE	canonical	3	105	junction_2	27	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8359	False	NA	-5	True	NA	NA	NA	72154595	72143855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_72145800_72145960_72146544_72154361
Isoform_71105_22	chr8	-	2650	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1745	-454	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6776	False	NA	-3	True	NA	NA	NA	72156178	72143853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_72145800_72145960_72146544_72156057
Isoform_71107_17	chr8	-	2626	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1745	-454	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	75.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6776	False	NA	-3	True	NA	NA	NA	72156178	72143853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_72145800_72145960_72146544_72156081
Isoform_71108_12	chr8	-	2625	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	20	-454	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	77	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8541	False	NA	-3	True	NA	NA	NA	72154413	72143853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_72145800_72145960_72146544_72154317
Isoform_71116_4	chr8	-	3195	28	FSM	ENSMUSG00000070000.14	ENSMUST00000146100.8	3188	28	-4	-3	-4	3	multi-exon	TRUE	non_canonical	0	0	junction_17	36.1995308763152	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCTGTGATTTTTGCC	NA	False	NA	-3	True	NA	NA	NA	72178364	72161034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
Isoform_7112_40	chr11	-	2962	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-39	4	-15	-4	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	100830245	100779065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_71122_39	chr8	-	3121	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	9	-1	0	1	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71123_25	chr8	-	3119	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	102.490148911095	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135332_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71124_5	chr8	-	3012	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATGAGACTATCTT	NA	False	NA	NA	False	TATAAA	-37	NA	73175322	73094844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71125_8	chr8	-	2988	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71126_8	chr8	-	2986	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.329481695746	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135332_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71127_24	chr8	-	2914	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175294	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_7113_39	chr11	-	4424	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-71	-1426	28	0	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830277	100777635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_71130_54	chr8	-	2782	22	NIC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGACTATCTTCTT	NA	False	NA	NA	False	TATAAA	-40	NA	73175295	73094841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71132_4	chr8	-	2693	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	-5	-2	-1	0	multi-exon	FALSE	canonical	3	40	junction_6	89.8414577371977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175300	73094842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71133_4	chr8	-	2640	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-31	11	-9	-11	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTCCCTCAATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	73175313	73111922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71134_12	chr8	-	3400	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	-25	1	-20	-1	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTTGTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	73175324	73131262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71135_6	chr8	-	2424	9	ISM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	6	7817	2	-7817	5prime_fragment	FALSE	canonical	3	316	junction_1	27.8702350187436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAACAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	73175293	73139078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
Isoform_71136_18	chr8	-	1657	9	FSM	ENSMUSG00000019732.15	ENSMUST00000019876.12	1769	9	118	-6	118	6	multi-exon	FALSE	canonical	3	18	junction_4	4.64858849544676	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTGTTTTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	73197596	73178013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73192275_73192480_73197238_73197341_73197436
Isoform_71141_54	chr8	-	3696	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	92	-142	1	1	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTCCTCTAGCTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	73228978	73214331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_71143_22	chr8	-	3729	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-15	-1	1	1	multi-exon	TRUE	canonical	3	101	junction_13	118.126552277382	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTCCTCTAGCTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	73228978	73214331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_71144_8	chr8	-	3614	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-39	138	3	3	multi-exon	FALSE	canonical	3	101	junction_13	118.126552277382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACACTTGATTTTTGTT	NA	False	NA	1	True	AATAAA	-34	NA	73229002	73214470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_71145_6	chr8	-	2937	9	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	63	4229	-2	3032	5prime_fragment	FALSE	canonical	3	416	junction_4	64.1482657598785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73229007	73218702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_71146_4	chr8	-	2983	8	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	0	3032	intron_retention	FALSE	canonical	3	416	junction_4	68.469865261877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73228979	73218702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
Isoform_71147_11	chr8	-	3441	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	4	938	4	-938	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGCTCACAGCAAGTAT	NA	False	NA	-11	True	AATAAA	-20	NA	73246454	73235422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
Isoform_71148_7	chr8	-	4399	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGTTTGGTTCTGGT	NA	False	NA	-6	True	AATAAA	-15	NA	73246474	73234484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
Isoform_71150_241	chr8	-	2975	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	23	-1	23	1	multi-exon	FALSE	canonical	3	122	junction_2	2.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTTGGAATCATTT	3640	False	NA	-4	True	AATAAA	-16	NA	73302091	73248403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73250951_73251366_73251442_73301738
Isoform_71152_14	chr8	-	3009	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	-11	-1	-11	1	multi-exon	FALSE	canonical	3	122	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTTTGGAATCATTT	3606	False	NA	-4	True	AATAAA	-16	NA	73302125	73248403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73250951_73251366_73251442_73301738
Isoform_71154_140	chr8	-	2134	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	29	729	3	-729	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTGTGAAAAATTGAA	NA	False	NA	-34	True	GATAAA	-20	NA	73324903	73319760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
Isoform_71156_14	chr8	-	2858	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	29	5	3	-5	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCAGTCTATCTACT	NA	False	NA	-4	True	AATAAA	-22	NA	73324903	73319036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
Isoform_71160_13	chr8	-	4644	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	-975	0	9	0	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	74080159	73541226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
Isoform_71161_22	chr8	-	3061	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	23	0	23	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244559	77976994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_71162_14	chr8	-	3096	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	-12	0	-12	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244594	77976994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_71163_3	chr8	-	2907	22	FSM	ENSMUSG00000037148.9	ENSMUST00000210922.2	2208	22	-146	-553	24	0	multi-exon	FALSE	canonical	0	0	junction_2	8.01868566087306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244558	77976994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_77977637_77983954_77984047_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
Isoform_71166_3	chr8	-	2464	11	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	29	-138	intron_retention	FALSE	non_canonical	0	0	junction_10	26.7805899860328	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78337253	78322748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78337150_78337196
Isoform_71167_295	chr8	-	1649	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-20	-7	-1	-1	multi-exon	FALSE	canonical	3	608	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235528	79231898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79233447_79235427
Isoform_71172_131	chr8	-	1695	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	-1	1	-1	-1	multi-exon	FALSE	canonical	3	249	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTCTTGATTTCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	79235528	79231898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79233493_79235427
Isoform_71174_37	chr8	-	2048	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	42	1702	42	-116	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGTCTCCTCGTGGTC	NA	False	NA	-6	True	NA	NA	NA	79547727	79533195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
Isoform_71175_105	chr8	-	584	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	39	3169	39	3	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547730	79534662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
Isoform_71177_14	chr8	-	1948	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	42	117	42	-117	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	-7	True	NA	NA	NA	79547727	79533196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
Isoform_71178_56	chr8	-	507	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	17	1583	17	3	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547752	79534662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
Isoform_71179_17	chr8	-	1340	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-2	4312	-2	-2	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTAGAGTTTCCCT	NA	False	NA	-8	True	AATAAA	-15	NA	80021568	79994538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
Isoform_7118_13	chr11	-	2031	17	ISM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-69	6251	30	1	5prime_fragment	FALSE	canonical	3	434	junction_9	49.3159060927608	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	TTTAAA	-43	NA	100830275	100785312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
Isoform_71180_6	chr8	-	1406	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-63	4307	-63	3	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGAGTTTCCCTGAGTG	NA	False	NA	-3	True	AATAAA	-20	NA	80021629	79994533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
Isoform_71181_4	chr8	-	758	5	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.7782469931718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	-5	True	AATAAA	-18	NA	80021584	79994535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80021542
Isoform_71184_69	chr8	-	3004	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	90	5	90	-5	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCATTTTTTTT	NA	False	NA	10	True	AATAAA	-28	NA	80126057	80065028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
Isoform_71185_32	chr8	-	3090	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	2	7	2	-7	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGTGTCATTTTTT	NA	False	NA	8	True	AATAAA	-26	NA	80126145	80065030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
Isoform_7119_45	chr11	-	3213	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	272	6	-64	-6	multi-exon	FALSE	canonical	2	4	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTGTGAGGTTA	NA	False	NA	-5	True	AATAAA	-13	NA	100861441	100847564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100850152_100860815
Isoform_71192_276	chr8	-	3550	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	63	180	-7	-180	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTACCGGTGTGTGGTC	NA	False	NA	-7	True	AATAAA	-21	NA	80438306	80410270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
Isoform_71193_415	chr8	-	3528	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	90	175	0	-175	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGGTGTGTGGTCATTCT	NA	False	NA	-2	True	AATAAA	-26	NA	80438279	80410265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
Isoform_712_104	chr10	-	1464	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	8	6627	8	262	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCATTTATGACATGTC	NA	False	NA	-11	True	AATAAA	-17	NA	19783427	19736272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
Isoform_7121_7	chr11	-	1021	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	-4	13	-4	12	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGATCAAACCTCCCAG	NA	False	NA	-9	True	TATAAA	-17	NA	100986230	100982970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
Isoform_71210_6	chr8	-	4700	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-28	1441	-28	-1441	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGGTCTTTTCTTTC	NA	False	NA	-6	True	AATAAA	-36	NA	81466154	81426576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_71211_14	chr8	-	3801	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-21	2333	-21	-2333	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTCATTTGATTT	NA	False	NA	-22	True	AATAAA	-18	NA	81466147	81427468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_71212_16	chr8	-	3776	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	18	2319	18	-2319	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTATTTTTCTAATAGT	NA	False	NA	-8	True	AATAAA	-32	NA	81466108	81427454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_71214_72	chr8	-	3618	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	165	2330	93	-2330	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCATTTGATTTATT	NA	False	NA	-19	True	AATAAA	-21	NA	81465961	81427465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_71215_27	chr8	-	4474	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	201	1438	129	-1438	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTTTCTTTCCAT	NA	False	NA	-3	True	AATAAA	-39	NA	81465925	81426573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_71225_18	chr8	-	2581	16	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-21	12060	-21	-829	5prime_fragment	FALSE	canonical	3	1231	junction_7	122.433002086856	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAAGGTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	81466147	81437195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
Isoform_7123_61	chr11	-	944	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	29	318	-7	-9	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAACCTCCCAGATAT	NA	False	NA	-5	True	TATAAA	-21	NA	100986233	100982966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
Isoform_71242_14	chr8	-	4052	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21251	4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585874	81491062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
Isoform_71244_9	chr8	-	4897	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	-25	-2	-2	0	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCTGTGTTACTTT	NA	False	NA	-7	True	AATAAA	-17	NA	81607150	81491066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
Isoform_71245_203	chr8	-	3961	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21252	4	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585873	81491062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
Isoform_71248_18	chr8	-	4708	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTACTGTCCTGTTTT	NA	False	NA	-9	True	ATTAAA	-14	NA	81741558	81707361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_71249_47	chr8	-	4564	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	52	91	37	-91	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTATATTTGGATTTT	NA	False	NA	-9	True	ATTAAA	-18	NA	81741505	81707452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_7125_4	chr11	-	2204	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	33	-946	-3	946	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100986229	100981702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
Isoform_71254_3	chr8	-	3212	8	NIC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	16	6	intron_retention	FALSE	canonical	1	1	junction_1	38.3927076409049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCCTGTTTTGGTTTT	NA	False	NA	-3	True	ATTAAA	-20	NA	81741526	81707355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_81708610_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
Isoform_71256_118	chr8	-	1671	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	5	-1	5	1	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83500784	83490248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_71258_3	chr8	-	1416	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-36	295	-36	-295	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGATTTTACAAAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	83500825	83490544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_7126_4	chr11	-	944	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	137.651141421689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTAATTTCCTCTG	NA	False	NA	23	True	AATATA	-11	NA	100986233	100982988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983_100986085_100986168
Isoform_71260_7	chr8	-	734	7	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-3	2956	-3	-2067	5prime_fragment	FALSE	canonical	3	426	junction_4	44.8094732047688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTAGTGTGTTGTATGA	NA	False	NA	NA	False	AATAAA	-16	NA	83500792	83493205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
Isoform_71261_19	chr8	-	4292	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	21	6	21	-6	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAGCCTTTCTGTGGAT	8191	False	NA	-3	True	AATAAA	-17	NA	84059094	84039656	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
Isoform_71262_3	chr8	-	1763	4	FSM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	18	-17	6	-4	multi-exon	FALSE	canonical	3	29	junction_2	125.913550590166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTGTGTGTGTGTGT	7435	False	NA	-6	True	AATAAA	-12	NA	84169118	84161127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84162670_84164181_84164263_84164613_84164686_84169050
Isoform_71263_26	chr8	-	1786	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	1	-1378	1	1	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	7420	False	NA	-1	True	AATAAA	-17	NA	84169133	84161122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
Isoform_71269_6	chr8	-	1157	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	1	0	1	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321105	84298328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
Isoform_7127_62	chr11	-	3103	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	52	10	2	-10	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGAGACTGCTGTTTC	9847	False	NA	-9	True	AATAAA	-19	NA	101010667	100987348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_71271_115	chr8	-	1111	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	10	-1	3	-1	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTGTGTTCTTTAG	NA	False	NA	-4	True	AATAAA	-14	NA	84321103	84298327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
Isoform_71272_6	chr8	-	1059	11	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	1190.40285617937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTGTGTTCTTTAG	NA	False	NA	-4	True	AATAAA	-14	NA	84321103	84298327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84301106_84301158_84320968
Isoform_71275_43	chr8	-	3006	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	-10	-1	-10	1	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84420699	84396718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
Isoform_71276_617	chr8	-	3105	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	3	3554	3	1	multi-exon	TRUE	canonical	3	231	junction_13	29.0604187256126	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425805	84396718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_71277_28	chr8	-	3130	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-22	3554	-22	1	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425830	84396718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_7128_6	chr11	-	3153	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	4	8	4	-8	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGACTGCTGTTTCGT	9799	False	NA	-7	True	AATAAA	-21	NA	101010715	100987346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_71280_29	chr8	-	2999	21	ISM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-18	4051	-18	0	5prime_fragment	FALSE	canonical	3	231	junction_12	28.1539961639551	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTTTGTCTGCAACCT	NA	False	NA	-15	True	NA	NA	NA	84425826	84397215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
Isoform_71282_18	chr8	-	3007	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-14	7	0	-5	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467812	84449997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71286_175	chr8	-	2872	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-10	5	0	-5	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467812	84449997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71287_37	chr8	-	2933	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-71	5	-61	-5	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467873	84449997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71288_33	chr8	-	2994	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-10	-117	0	4	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTTTGGAACAATAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	84467812	84449875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71289_5	chr8	-	3114	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-132	-115	21	2	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGCTTTGGAACAATAAA	NA	False	NA	NA	False	AATAAA	-19	NA	84467934	84449877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71293_40	chr8	-	2724	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	144	118	1	-5	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGCACGTTTGCT	NA	False	NA	-16	True	ATTAAA	-14	NA	84467811	84449997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71294_9	chr8	-	2843	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	143	0	0	0	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	AATAAA	-17	NA	84467812	84449879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71296_4	chr8	-	1518	11	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-9	4183	1	1	5prime_fragment	FALSE	canonical	3	115	junction_7	23.9768638483018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACAGCTGTGGGGTGT	NA	False	NA	NA	False	AATAAA	-37	NA	84467811	84454175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
Isoform_71297_76	chr8	-	1326	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	19	6	17	-6	multi-exon	FALSE	canonical	3	145	junction_2	17	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7552	False	NA	-15	True	AATAAA	-16	NA	84738768	84736856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84737122_84737339_84737402_84737769
Isoform_71299_19	chr8	-	988	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	68.8250600354906	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7525	False	NA	-15	True	AATAAA	-16	NA	84738795	84736856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84737122_84737339_84737402_84737769_84738378_84738742
Isoform_713_4	chr10	-	3421	15	FSM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	-8	-339	-8	-2	multi-exon	FALSE	canonical	2	3	junction_10	4.58257569495584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTGATGTCTCTCGA	NA	False	NA	-6	True	AATAAA	-20	NA	21036891	21000835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
Isoform_7130_7	chr11	-	2965	8	FSM	ENSMUSG00000017802.15	ENSMUST00000107295.10	3179	8	19	195	19	-4	multi-exon	FALSE	canonical	3	12	junction_5	32.1222155944119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGCTGTTTCGTTGTG	9864	False	NA	-3	True	AATAAA	-25	NA	101010650	100987342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
Isoform_71300_15	chr8	-	1041	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	-26	-6	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	63.754738385995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7494	False	NA	-15	True	AATAAA	-16	NA	84738826	84736856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84737122_84737339_84737402_84737769_84738400_84738742
Isoform_71303_4	chr8	-	2672	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	0	-8	0	8	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCCTTAACATTTAATT	5259	False	NA	NA	False	NA	NA	NA	84769218	84756914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
Isoform_71304_22	chr8	-	892	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	11	-269	11	269	multi-exon	FALSE	canonical	3	87	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2859	False	NA	-2	True	AATAAA	-17	NA	84771618	84769288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84769961_84771398
Isoform_71305_4	chr8	-	859	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-30	-195	-30	195	multi-exon	FALSE	canonical	3	87	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAAAACAGAGCCCCTG	2818	False	NA	-76	True	NA	NA	NA	84771659	84769362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84769961_84771398
Isoform_71306_3	chr8	-	971	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-68	-269	-68	269	multi-exon	FALSE	canonical	3	87	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2780	False	NA	-2	True	AATAAA	-17	NA	84771697	84769288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84769961_84771398
Isoform_71308_18	chr8	-	2321	13	FSM	ENSMUSG00000037103.9	ENSMUST00000041367.9	2312	13	-8	-1	-2	1	multi-exon	FALSE	canonical	3	17	junction_1	56.6688112339289	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTCCTGTTCTGTC	9255	False	NA	-2	True	ACTAAA	-18	NA	84831399	84823699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_71309_373	chr8	-	2206	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-7	0	-2	0	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTCCTGTTCTGT	9255	False	NA	-3	True	ACTAAA	-17	NA	84831399	84823700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_7131_3	chr11	-	2963	8	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	14	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	29.3250606763817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTGCTGTTTCGTTGT	9859	False	NA	-4	True	AATAAA	-24	NA	101010655	100987343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_100989447_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
Isoform_71312_7	chr8	-	2286	12	NIC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	0	-5	intron_retention	FALSE	canonical	3	169	junction_6	21.1695243293414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	9257	False	NA	-8	True	ACTAAA	-12	NA	84831397	84823705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
Isoform_71314_5	chr8	-	2895	11	NIC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	169	junction_6	21.5025579873651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	9267	False	NA	-5	True	ACTAAA	-15	NA	84831387	84823702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
Isoform_71315_9	chr8	-	3429	29	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_17	19.365542458033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874537	84859467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865456_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_71317_154	chr8	-	3423	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	39	9	0	0	multi-exon	TRUE	canonical	3	61	junction_17	12.7601500215095	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	False	NA	-10	True	AATGAA	-15	NA	84874526	84859465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_71319_3	chr8	-	3344	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.4284786724755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874526	84859467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84859887_84859960_84860009_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
Isoform_7132_22	chr11	-	3025	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	29	2	-5	1	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	720	False	NA	1	True	AAGAAA	-20	NA	101062148	101053506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_71320_31	chr8	-	2546	5	ISM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	13554	265	13554	-265	3prime_fragment	FALSE	canonical	3	31	junction_1	1.22474487139159	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTTGCATTGCTAA	NA	False	NA	1	True	AAAAAG	-28	NA	84950130	84937571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848
Isoform_71322_39	chr8	-	4357	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	0	268	0	-268	multi-exon	TRUE	canonical	3	19	junction_10	5.27694550342846	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTGGGTTGCATTGC	6086	False	NA	-2	True	AAAAAG	-25	NA	84963684	84937574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
Isoform_71323_11	chr8	-	685	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	2	5	intron_retention	TRUE	canonical	3	981	junction_1	437.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTTTGGTGCTTT	9836	False	NA	-2	True	AATAAA	-17	NA	84976346	84972861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_84972948_84972967_84973323_84976102
Isoform_71324_425	chr8	-	616	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	3	-3	3	3	multi-exon	FALSE	canonical	3	1764	junction_2	46	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	9837	False	NA	-4	True	AATAAA	-15	NA	84976345	84972863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84973323_84976102_84976159_84976244
Isoform_71326_6	chr8	-	1697	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	6	1116	6	0	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTACTTTTATTT	6972	False	NA	NA	False	NA	NA	NA	84983947	84977650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_71327_339	chr8	-	1204	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	39	1576	-38	-460	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATCTTCACCCACAC	7005	False	NA	-2	True	AATAAA	-20	NA	84983914	84978110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_71328_5	chr8	-	2784	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	28	7	28	-7	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCGCATGTTTTACAAT	6994	False	NA	NA	False	NA	NA	NA	84983925	84976541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
Isoform_71330_6	chr8	-	1296	4	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	29	-466	intron_retention	FALSE	canonical	3	199	junction_1	15.6914697279198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	6995	False	NA	-8	True	AATAAA	-14	NA	84983924	84978116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84978341_84980491_84980982_84982872_84983049_84983518
Isoform_71333_14	chr8	-	1370	3	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	32	369	intron_retention	FALSE	canonical	3	223	junction_2	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAAACCAAAAAACAA	6998	False	NA	NA	False	NA	NA	NA	84983921	84980190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84980982_84982872_84983049_84983518
Isoform_71334_9	chr8	-	1299	3	NIC	ENSMUSG00000004996.10	novel	804	4	NA	NA	-38	369	intron_retention	FALSE	canonical	3	28	junction_1	97.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAAACCAAAAAACAA	7005	False	NA	NA	False	NA	NA	NA	84983914	84980190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84980982_84982936_84983049_84983518
Isoform_71337_32	chr8	-	1608	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	6	505	-4	1	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997003	84984928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_71338_3	chr8	-	2209	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-62	-28	-62	28	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTTTGCATGTT	NA	False	NA	NA	False	NA	NA	NA	84997071	84984395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_71339_8	chr8	-	1664	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-45	500	-45	6	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTCTAAACTCATCTA	NA	False	NA	-16	True	ATTAAA	-21	NA	84997054	84984923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_7134_23	chr11	-	3050	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	-39	-1	-5	1	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTGTGGGAGTGT	686	False	NA	1	True	AAGAAA	-20	NA	101062182	101053506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_71340_10	chr8	-	2134	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	13	-28	0	28	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTGTTTGCATGTT	NA	False	NA	NA	False	NA	NA	NA	84996996	84984395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_71341_3	chr8	-	2843	9	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-41	-2	intron_retention	FALSE	canonical	3	143	junction_8	31.6501875981802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGCCTTGTTTCTAA	NA	False	NA	-25	True	ATTAAA	-12	NA	84997050	84984932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
Isoform_71345_9	chr8	-	4216	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85413776	85397107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
Isoform_71346_52	chr8	-	4285	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	59	0	59	0	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414472	85397107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
Isoform_71347_7	chr8	-	2928	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	31	1385	31	1276	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCCTTTTATTTTTCA	NA	False	NA	NA	False	AATGAA	-14	NA	85414500	85398492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
Isoform_71348_10	chr8	-	4205	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414473	85397107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
Isoform_71349_7	chr8	-	1216	2	FSM	ENSMUSG00000053226.8	ENSMUST00000238279.2	1369	2	154	-1	154	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGCTTCTTTCTG	553	False	NA	1	True	CATAAA	-16	NA	85558884	85542032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85543163_85558798
Isoform_71352_148	chr8	-	1796	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-11	289	-11	-30	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGCCCTAATAATGG	NA	False	NA	-44	True	AATAAA	-7	NA	85567281	85561569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_71353_15	chr8	-	1844	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-23	253	1	6	multi-exon	TRUE	canonical	3	805	junction_3	189.238440862315	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCACAGCTGTTTGTGA	NA	False	NA	-8	True	AATAAA	-43	NA	85567293	85561533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_7136_3	chr11	-	2993	13	NIC	ENSMUSG00000035172.16	novel	3010	13	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	19.5867018379534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTTCCTGTGGGAG	715	False	NA	-2	True	AAGAAA	-17	NA	101062153	101053509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
Isoform_71360_97	chr8	-	1799	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	13	30	-11	-30	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGCCCTAATAATGG	NA	False	NA	-44	True	AATAAA	-7	NA	85567281	85561569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_71363_7	chr8	-	1871	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	-59	30	-59	-30	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGCCCTAATAATGG	NA	False	NA	-44	True	AATAAA	-7	NA	85567353	85561569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_71365_6	chr8	-	2262	7	ISM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-11	1443	-11	-475	5prime_fragment	FALSE	canonical	3	805	junction_1	212.524246982681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCACCTTGGCACCATTT	NA	False	NA	NA	False	NA	NA	NA	85567281	85562723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_71366_6	chr8	-	2269	7	ISM	ENSMUSG00000003813.16	ENSMUST00000128035.2	1068	9	15	469	-9	-469	5prime_fragment	FALSE	canonical	3	614	junction_1	278.433365257989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCACCATTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	85567279	85562717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
Isoform_71374_1859	chr8	-	1875	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	68	241	-36	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573495	85568719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
Isoform_71375_78	chr8	-	2030	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	-87	241	-87	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573650	85568719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
Isoform_7138_48	chr11	-	4170	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	24	-1	0	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2642	False	NA	-7	True	AATAAA	-15	NA	101117252	101081940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
Isoform_71381_5	chr8	-	2010	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	163	-6	163	6	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620383	85613015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
Isoform_71382_32	chr8	-	1821	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	158	188	158	-188	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620388	85613209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
Isoform_71384_41	chr8	-	1913	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	7	194	3	-194	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGACTGGACTAGGT	NA	False	NA	-13	True	AATAAA	-15	NA	85620543	85613215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_71385_95	chr8	-	1789	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	137	188	133	-188	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620413	85613209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_71386_6	chr8	-	2093	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	27	-6	23	6	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620523	85613015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_71389_7	chr8	-	1974	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	146	-6	142	6	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCTTCTCAATCTAGA	NA	False	NA	1	True	AATAAA	-15	NA	85620404	85613015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
Isoform_7139_3	chr11	-	4171	21	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_19	32.178059295116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGGCAAGTTGTGTCC	2644	False	NA	-9	True	AATAAA	-13	NA	101117250	101081942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
Isoform_71390_3	chr8	-	1748	11	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	147	-188	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	82.3371119240892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620399	85613209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620183_85620314_85620370
Isoform_71393_8	chr8	-	2802	9	ISM	ENSMUSG00000053693.17	ENSMUST00000109741.9	4872	26	18531	2	5292	1	3prime_fragment	FALSE	canonical	1	2	junction_8	3.38193731461717	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGGGTTCACACCT	NA	False	NA	-1	True	AATAAA	-18	NA	85645451	85638533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_85639871_85639948_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
Isoform_71395_6	chr8	-	2755	7	NIC	ENSMUSG00000053693.17	novel	4872	26	NA	NA	5853	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	2.76887462097269	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTCTTGGGGTTCACAC	NA	False	NA	-3	True	AATAAA	-16	NA	85644890	85638535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681
Isoform_71396_6	chr8	-	2875	8	NIC	ENSMUSG00000053693.17	novel	4872	26	NA	NA	5297	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	3.54562104171167	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGGGTTCACACCT	NA	False	NA	-1	True	AATAAA	-18	NA	85645446	85638533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
Isoform_71398_336	chr8	-	1001	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-15	1058	-15	-1	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	8268	False	NA	-9	True	AATAAA	-13	NA	85692655	85684296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_71399_9	chr8	-	2089	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-42	-3	11	3	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTTATCTATTTATT	8241	False	NA	-4	True	NA	NA	NA	85692682	85683235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_714_4	chr10	-	521	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181677.2	617	2	-209	305	0	-305	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTCTTGGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	22024718	21993565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_21993756_22024387
Isoform_71400_226	chr8	-	1041	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-55	1058	-2	-1	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	8228	False	NA	-9	True	AATAAA	-13	NA	85692695	85684296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_71402_11	chr8	-	1072	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-4	976	-4	81	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTGGTGACGTTTGCTT	8279	False	NA	73	True	NA	NA	NA	85692644	85684214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_71405_10	chr8	-	1916	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	36	-1	intron_retention	FALSE	canonical	3	9	junction_9	457.889387688801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	4749	False	NA	-9	True	AATAAA	-13	NA	85696174	85684296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726
Isoform_71407_18	chr8	-	1721	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	202	1058	43	-1	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCGAGTGCTTTGTG	4756	False	NA	-9	True	AATAAA	-13	NA	85696167	85684296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
Isoform_71409_15	chr8	-	1510	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	1	-4	intron_retention	FALSE	canonical	3	25	junction_9	454.462509828375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGACCGAGTGCTTT	4528	False	NA	-12	True	AATAAA	-10	NA	85696395	85684299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85696350
Isoform_7141_552	chr11	-	719	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	166	1	-5	-1	multi-exon	FALSE	canonical	3	1870	junction_1	0	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCTAGTGTGTGGGG	5668	False	NA	-6	True	AATAAA	-19	NA	101169774	101168794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101169279_101169539
Isoform_71412_13	chr8	-	1143	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	-4	2	-4	-2	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCGAGTGCTTTGT	8226	False	NA	-10	True	AATAAA	-12	NA	85692697	85684297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
Isoform_71413_779	chr8	-	1254	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	2	0	2	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8402	False	NA	-4	True	AATAAA	-14	NA	85751908	85744559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
Isoform_71415_103	chr8	-	1190	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	47	1	4	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTAGTCTTCATTCT	NA	False	NA	-3	True	AATAAA	-34	NA	85807328	85801664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
Isoform_71416_11	chr8	-	1472	8	FSM	ENSMUSG00000005150.17	ENSMUST00000131909.8	1406	8	-68	2	3	0	multi-exon	FALSE	canonical	3	115	junction_4	7.90763000177031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGTCTTCATTC	NA	False	NA	-4	True	AATAAA	-33	NA	85807329	85801665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
Isoform_71417_3	chr8	-	1553	7	FSM	ENSMUSG00000005150.17	ENSMUST00000136696.8	1561	7	7	1	7	0	multi-exon	FALSE	canonical	3	115	junction_3	8.39477350630869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTAGTCTTCATTCT	NA	False	NA	-3	True	AATAAA	-34	NA	85807325	85801664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85801973_85802451_85802567_85802652_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
Isoform_71422_916	chr8	-	3192	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	285	-3	-48	3	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATCTTTGTTTTTTG	NA	False	NA	-5	True	AATAAA	-18	NA	86026146	85987017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
Isoform_71424_17	chr8	-	3455	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	18	1	18	-1	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGATTATCTTTGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	86026413	85987021	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
Isoform_71434_50	chr8	-	1469	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	23	95	4	-95	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTAGTGTGGTGTAG	NA	False	NA	-1	True	AATAAA	-22	NA	86159439	86135482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
Isoform_71435_5	chr8	-	1559	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	-69	97	-69	-97	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTAAGTAGTGTGGTGT	NA	False	NA	-3	True	AATAAA	-20	NA	86159531	86135484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
Isoform_71436_12	chr8	-	558	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	0	1029	0	30	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTATTCTCTGATATT	NA	False	NA	NA	False	AATAAA	-19	NA	86159462	86136416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
Isoform_71438_34	chr8	-	2280	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	3	636	3	-636	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGCTCTGTCTCATTA	NA	False	NA	-6	True	ATTAAA	-9	NA	86281970	86264897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_71439_25	chr8	-	2910	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	3	6	3	-6	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTTCCTCAGCATTC	NA	False	NA	NA	False	AATAAA	-9	NA	86281970	86264267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_7144_5	chr11	-	2081	12	NIC	ENSMUSG00000035086.14	novel	2123	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	139.982702591404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193074	101179087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187019_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_71440_162	chr8	-	1918	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	3	998	3	-998	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCTGTGTCACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	86281970	86265259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
Isoform_71448_14	chr8	-	2367	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-27	966	-27	-966	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCTGTGGCCAGGGCG	NA	False	NA	-31	True	AATAAA	-10	NA	86567577	86445172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_71449_27	chr8	-	3161	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	149	-4	149	4	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGCTGTGGCAAGCAAC	NA	False	NA	-17	True	AATAAA	-17	NA	86567401	86444202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_7145_379	chr11	-	2010	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	45	2310	0	0	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193067	101179087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_71450_48	chr8	-	2015	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	159	1132	159	-1132	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTGTTTTAAGCACT	NA	False	NA	-17	True	AATAAA	-19	NA	86567391	86445338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_71451_48	chr8	-	2185	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-11	1132	-11	-1132	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTGTTTTAAGCACT	NA	False	NA	-17	True	AATAAA	-19	NA	86567561	86445338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_71457_15	chr8	-	3310	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	0	-4	0	4	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGCTGTGGCAAGCAAC	NA	False	NA	-17	True	AATAAA	-17	NA	86567550	86444202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
Isoform_71460_155	chr8	-	2140	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-109	-63	-109	63	multi-exon	FALSE	canonical	3	375	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAAAAATTTAATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	87472671	87450571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_87452485_87472444
Isoform_71465_211	chr8	-	3270	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-9	3208	-9	-28	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATTTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	87611895	87570974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
Isoform_71475_14	chr8	-	2826	3	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	-28	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	166.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATTTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	87611895	87570974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_87571670_87587053_87588739_87611449
Isoform_7148_28	chr11	-	2654	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	8	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193078	101179087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_71480_95	chr8	-	2343	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	30	1252	30	476	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088792	89058938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_71482_60	chr8	-	2425	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	-52	1252	-52	476	multi-exon	FALSE	canonical	3	463	junction_12	36.2439650148821	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088874	89058938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_71484_6	chr8	-	2377	17	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	-3	474	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	122.717663765246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCGCTGGTGTGTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	89088825	89058940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_71486_4	chr8	-	2250	16	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	-34	1746	-34	1	5prime_fragment	FALSE	canonical	3	463	junction_11	32.0534276204936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTGTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-36	NA	89088856	89059432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
Isoform_7149_7	chr11	-	3465	10	FSM	ENSMUSG00000035086.14	ENSMUST00000139997.9	3476	10	7	4	-4	-4	multi-exon	FALSE	canonical	3	416	junction_6	43.6603048800878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCAAGTGGTACGCCTG	NA	False	NA	-6	True	AATAAA	-21	NA	101193071	101179091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
Isoform_71497_5	chr8	-	1410	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	25	264	-2	-264	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTGAGACTCCAT	NA	False	NA	1	True	AATAAA	-28	NA	89362731	89353454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
Isoform_71498_3	chr8	-	1482	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	-47	264	-47	-264	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTGAGACTCCAT	NA	False	NA	1	True	AATAAA	-28	NA	89362803	89353454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
Isoform_71499_5	chr8	-	5122	3	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	1716	12	1716	-12	3prime_fragment	FALSE	canonical	3	240	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAACATATTGTGTCT	NA	False	NA	NA	False	AATACA	-17	NA	89769074	89753874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_89755447_89756571_89760027_89768979
Isoform_715_16	chr10	-	573	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	-23	-2	-23	2	multi-exon	FALSE	canonical	3	41	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGCCTTGGTTTTAT	NA	False	NA	-6	True	NA	NA	NA	22024745	22020198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_22020414_22024387
Isoform_71500_17	chr8	-	2121	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	19	-969	-7	-1	multi-exon	TRUE	canonical	3	139	junction_9	96.0081015100057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTTTTAACTTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	91860632	91850127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
Isoform_71502_23	chr8	-	1743	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	9	-581	9	-319	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860642	91850515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
Isoform_71504_5	chr8	-	2133	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-2	69	-2	1	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTGTTAAATAATTTTC	NA	False	NA	-72	True	AATAAA	-19	NA	91860627	91850195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
Isoform_71505_4	chr8	-	2198	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-1	3	-1	-3	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTATTTTTTTAACTTC	NA	False	NA	-6	True	AATAAA	-14	NA	91860626	91850129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
Isoform_71506_17	chr8	-	2132	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	16	-69	12	-1	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTTTTAACTTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	91860639	91850127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
Isoform_71508_39	chr8	-	1725	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	35	319	5	-319	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860620	91850515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
Isoform_71511_3	chr8	-	2057	4	FSM	ENSMUSG00000031734.14	ENSMUST00000175795.4	2748	4	434	257	282	-257	multi-exon	FALSE	canonical	2	5	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACAGGAAAGGACAAAAG	NA	False	NA	NA	False	AAGAAA	-28	NA	92528261	92525409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_92525605_92526038_92526106_92526300_92527427_92527592
Isoform_71513_126	chr8	-	3344	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	201	335	201	-335	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAACTGCTGTTAGTTA	NA	False	NA	-43	True	AATAAA	-17	NA	94739269	94698550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_71515_66	chr8	-	3498	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	166	216	166	-216	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGTGTGGGGGCAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94739304	94698431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_71517_8	chr8	-	3710	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	170	0	170	0	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTTCCATTTCAGATG	NA	False	NA	-5	True	AATAAA	-17	NA	94739300	94698215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_71518_9	chr8	-	3643	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	234	3	234	-3	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTCTTCCATTTCAG	NA	False	NA	-8	True	AATAAA	-14	NA	94739236	94698218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
Isoform_71524_2355	chr8	-	1086	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	17	3907	-8	2	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	2355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGGATCCTTTTTTCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	94763642	94746030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
Isoform_71531_6	chr8	-	711	2	FSM	ENSMUSG00000031755.7	ENSMUST00000170208.2	491	2	-28	-192	-28	2	multi-exon	FALSE	canonical	3	32	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTTTATAAATTAC	5602	False	NA	-1	True	AATAAA	-17	NA	94796869	94794579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94795011_94796589
Isoform_71532_12	chr8	-	2657	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	407	0	407	0	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	False	NA	-3	True	AATAAA	-15	NA	94825149	94794581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
Isoform_71534_3	chr8	-	2522	17	NNC	ENSMUSG00000031755.7	novel	3064	17	NA	NA	417	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	7.38003006430191	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTTGTTGTTTATAAA	NA	False	NA	-5	True	AATAAA	-13	NA	94825139	94794583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819145_94819251_94824863
Isoform_71537_62	chr8	-	1811	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	0	-4	0	4	multi-exon	FALSE	canonical	3	211	junction_8	506.411394026635	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTGAGTGTGTCTT	NA	False	NA	-10	True	ATTAAA	-23	NA	95564893	95549184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
Isoform_71538_465	chr8	-	1555	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	51	2753	-42	4	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTGAGTGTGTCTT	NA	False	NA	-10	True	ATTAAA	-23	NA	95564935	95549184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
Isoform_71539_10	chr8	-	1619	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	-10	2750	-10	7	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	-7	True	ATTAAA	-26	NA	95564996	95549181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
Isoform_71543_5	chr8	-	2586	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTACTGTTGATCAATA	NA	False	NA	-2	True	AATAAA	-14	NA	95602958	95590491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
Isoform_71545_3	chr8	-	2383	9	NIC	ENSMUSG00000063605.6	novel	2304	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	4.99843725578305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCAGAGTTCTGAAAG	NA	False	NA	-4	True	AATAAA	-15	NA	95644149	95629500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95643949
Isoform_71546_19	chr8	-	2276	9	FSM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	26	2	26	-2	multi-exon	FALSE	canonical	2	7	junction_8	3.67423461417477	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGAGTTCTGAAAGTG	NA	False	NA	-2	True	AATAAA	-17	NA	95644700	95629498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
Isoform_71548_7	chr8	-	3609	22	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	22.097495779565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTGCAATCTGAATCG	NA	False	NA	-9	True	ATTAAA	-16	NA	95869191	95826460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
Isoform_71549_7	chr8	-	3238	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	38	1	-6	-1	multi-exon	TRUE	canonical	3	25	junction_2	24.0325264354334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATCTGAATCGTCAG	NA	False	NA	-5	True	ATTAAA	-20	NA	95869137	95826456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
Isoform_71552_23	chr8	-	3586	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.2668374307977	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATCTGAATCGTCAG	NA	False	NA	-5	True	ATTAAA	-20	NA	95869191	95826456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
Isoform_71553_13	chr8	-	3251	19	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	17.8975134489214	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATCTGAATCGTCAG	NA	False	NA	-5	True	ATTAAA	-20	NA	95869177	95826456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
Isoform_71554_6	chr8	-	4392	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-281	3121	-281	-3121	multi-exon	FALSE	canonical	3	26	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCTTCCACTCGTTCT	NA	False	NA	-2	True	AGTAAA	-21	NA	96058859	96052759	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96056441_96058148
Isoform_71555_13	chr8	-	3975	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	132	3125	132	-3125	multi-exon	FALSE	canonical	3	26	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACAGCTCTTCCACTCG	NA	False	NA	-6	True	AGTAAA	-17	NA	96058446	96052763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96056441_96058148
Isoform_71556_51	chr8	-	1268	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	25	2	0	1	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161472	96146878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_71557_103	chr8	-	1226	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	67	2	-6	1	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161430	96146878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_71558_3	chr8	-	2033	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTACTTTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	96161426	96146878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
Isoform_7156_509	chr11	-	1298	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	216	2	7	-2	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTTGTATACTGCCA	NA	False	NA	-23	True	AGTAAA	-14	NA	101308225	101297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_71564_4	chr8	-	2397	14	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	920	5	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	405.483216734373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAACTTCTTGGGTTT	NA	False	NA	-13	True	AATATA	-18	NA	96462437	96446778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313
Isoform_7157_24	chr11	-	1476	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	216	-176	7	176	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	NA	False	NA	0	True	ATTAAA	-41	NA	101308225	101297488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_71570_6	chr8	-	2555	15	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	71043	701	308	-3	3prime_fragment	FALSE	canonical	3	1077	junction_10	232.038053265548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTGTCTGAAACTTC	NA	False	NA	-21	True	AATATA	-10	NA	96463049	96446786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881
Isoform_71573_5	chr8	-	2812	17	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	66630	693	-652	5	3prime_fragment	FALSE	canonical	3	1077	junction_10	229.707822230219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAACTTCTTGGGTTT	NA	False	NA	-13	True	AATATA	-18	NA	96467462	96446778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357
Isoform_71575_5	chr8	-	3387	20	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	64230	687	-3052	11	3prime_fragment	FALSE	canonical	3	1077	junction_10	216.570703942371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGGTTTGTGTAA	NA	False	NA	-7	True	AATATA	-24	NA	96469862	96446772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731
Isoform_7158_147	chr11	-	1321	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	193	2	-16	-2	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTTGTATACTGCCA	NA	False	NA	-23	True	AGTAAA	-14	NA	101308248	101297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
Isoform_71580_5	chr8	-	7665	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	25	700	-4	5	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAACTTCTTGGGTTT	NA	False	NA	-13	True	AATATA	-18	NA	96534065	96446778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_71585_3	chr8	-	4334	25	ISM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	-34	26276	1	686	5prime_fragment	FALSE	canonical	3	674	junction_6	148.112517054884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGCTGGTTGAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	96534058	96473059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_71588_10	chr8	-	3540	24	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-46	28856	4	-1196	5prime_fragment	FALSE	canonical	3	469	junction_5	184.483051306297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAATTGCTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	96534055	96474941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_71590_4	chr8	-	2777	20	NIC	ENSMUSG00000036550.17	novel	8152	48	NA	NA	1	1860	combination_of_known_junctions	FALSE	canonical	3	313	junction_2	268.565894873487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATTGATGATGAAGCA	NA	False	NA	NA	False	NA	NA	NA	96534058	96479733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_71592_4	chr8	-	1558	11	ISM	ENSMUSG00000036550.17	ENSMUST00000212228.2	2925	13	-4	2992	-2	-10	5prime_fragment	FALSE	canonical	3	1066	junction_5	84.9173716032238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTTAGGGCA	NA	False	NA	NA	False	AATAGA	-26	NA	96534094	96491571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
Isoform_71593_68	chr8	-	348	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	-20	10	-7	-10	multi-exon	FALSE	canonical	0	0	junction_1	187	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAAAGTTCAAATAG	NA	False	NA	-14	True	NA	NA	NA	96544326	96535189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96535388_96539051_96539129_96544253
Isoform_71594_99	chr8	-	3280	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	37	-2	20	-2	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580130	96562549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
Isoform_71598_8	chr8	-	3261	13	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.617479615887	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580118	96562549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_96563108_96563128_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
Isoform_71599_342	chr8	-	3261	13	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7773749669282	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580135	96562549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_96563109_96563132_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
Isoform_716_71	chr10	-	2745	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	129	-1	43	1	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTATTCCCCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	22607217	22579776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
Isoform_71606_28	chr8	-	3745	11	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	9	-2	intron_retention	FALSE	canonical	3	212	junction_10	48.716013794234	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCTCCTTTATCTT	NA	False	NA	-2	True	AATAAA	-17	NA	96580141	96562549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
Isoform_71610_784	chr8	-	2383	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	146	1	-9	-1	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCTGCTTTTCTAC	NA	False	NA	-5	True	AATAAA	-16	NA	96615029	96590762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
Isoform_71613_15	chr8	-	1292	8	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	146	5161	-9	177	5prime_fragment	FALSE	canonical	3	549	junction_7	40.4772548879652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAGTTCAGTTGAAATA	NA	False	NA	NA	False	AATAAA	-16	NA	96615029	96595922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
Isoform_71616_180	chr8	-	2382	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	7	17	0	-4	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGATGTAAATTCATT	NA	False	NA	-11	True	AATAAA	-13	NA	104975183	104953333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
Isoform_71618_61	chr8	-	2308	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	0	4	0	-4	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGATGTAAATTCATT	NA	False	NA	-11	True	AATAAA	-13	NA	104975183	104953333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
Isoform_71619_3	chr8	-	1195	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-48	6587	-48	-6587	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTATATGTCACAAGACA	NA	False	NA	NA	False	AATAAA	-15	NA	105122487	105081409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
Isoform_71620_31	chr8	-	3140	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	234	1253	-69	-1253	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTTTTTTGTTGTTGT	2002	False	NA	-8	True	AATATA	-18	NA	105169445	105145564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_71621_12	chr8	-	3352	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	25	1250	-7	-1250	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTGTTGTTGTTAT	1793	False	NA	-5	True	AATATA	-21	NA	105169654	105145561	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_71622_13	chr8	-	4392	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	234	1	-69	-1	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTTTGGTGACTTTGT	2002	False	NA	-2	True	AATAAA	-19	NA	105169445	105144312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
Isoform_71626_200	chr8	-	1788	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	19	1	-4	-1	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTCTTGTTGTCTGGA	3352	False	NA	NA	False	AATAAA	-18	NA	105261250	105237660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
Isoform_71627_19	chr8	-	1735	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	-1	1	0	-1	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTCTTGTTGTCTGGA	3333	False	NA	NA	False	AATAAA	-18	NA	105261269	105237660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
Isoform_71631_3	chr8	-	736	3	ISM	ENSMUSG00000031878.19	ENSMUST00000159702.2	456	4	-4	1562	-4	-1562	5prime_fragment	FALSE	canonical	3	766	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGAGACCTTGTC	3352	False	NA	NA	False	NA	NA	NA	105261250	105256223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_105256749_105257024_105257129_105261143
Isoform_71632_20	chr8	-	827	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	-27	7	-25	0	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368358	105366479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
Isoform_71633_13	chr8	-	2286	2	FSM	ENSMUSG00000069920.11	ENSMUST00000093217.9	2325	2	34	5	34	-5	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATATGTTTCTCTTCT	9997	False	NA	NA	False	ATTAAA	-10	NA	105981749	105979275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105981475_105981662
Isoform_71635_11	chr8	-	1660	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	28	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTGCACGCCTTTAA	533	False	NA	NA	False	AAAACA	-42	NA	105991213	105984918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
Isoform_71636_65	chr8	-	1406	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	283	0	-283	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGGAGATGCTGAGGTCT	505	False	NA	-6	True	AATAAA	-20	NA	105991241	105985200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
Isoform_71637_4	chr8	-	1482	4	NIC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	1	-286	intron_retention	FALSE	canonical	3	50	junction_3	7.78888096369861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGGAGATGCTGAGG	506	False	NA	-9	True	AATAAA	-17	NA	105991240	105985203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_105985928_105986068_105986620_105987153_105987313_105991192
Isoform_71638_3	chr8	-	1997	3	NIC	ENSMUSG00000031887.14	novel	386	4	NA	NA	11	-289	intron_retention	FALSE	canonical	3	50	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACTTGCGGAGATGCTG	522	False	NA	-12	True	AATAAA	-14	NA	105991224	105985206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_105985928_105986068_105987313_105991192
Isoform_71639_3	chr8	-	1658	4	NNC	ENSMUSG00000031887.14	novel	386	4	NA	NA	-1	-286	intron_retention	FALSE	canonical	3	3	junction_2	26.7374061735406	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGGAGATGCTGAGG	504	False	NA	-9	True	AATAAA	-17	NA	105991242	105985203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_105985928_105986068_105986794_105987153_105987313_105991192
Isoform_71640_4	chr8	-	2274	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	4	1274	4	-2	multi-exon	FALSE	canonical	3	15	junction_6	10.3628063333269	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGGCTTTGGGTGTCT	NA	False	NA	NA	False	AATAGA	-39	NA	106016156	106008315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
Isoform_71641_4	chr8	-	2528	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	-30	-1	-27	1	multi-exon	FALSE	canonical	3	7	junction_13	7.19467258528611	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	0	True	AATAAA	-16	NA	106022760	106016554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
Isoform_71642_6	chr8	-	2273	7	NIC	ENSMUSG00000041679.10	novel	2304	7	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	2.74873708374511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTTCTCTGATGTTCT	6338	False	NA	NA	False	ATTAAA	-14	NA	106052899	106038972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106039578_106039676_106039895_106040052_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
Isoform_71643_3	chr8	-	2314	7	FSM	ENSMUSG00000041679.10	ENSMUST00000210412.2	2304	7	-6	-4	-6	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.73353657780945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGACTTTCTCTGATGT	6340	False	NA	NA	False	ATTAAA	-11	NA	106052897	106038975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106039578_106039676_106039895_106040052_106040197_106040312_106040529_106041707_106042701_106049896_106049999_106052858
Isoform_71644_3	chr8	-	2526	5	NIC	ENSMUSG00000041679.10	novel	2416	6	NA	NA	-6	0	intron_retention	FALSE	canonical	1	2	junction_1	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACTTTCTCTGATGTT	6340	False	NA	NA	False	ATTAAA	-12	NA	106052897	106038974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
Isoform_71645_4	chr8	-	3944	22	FSM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_10	2.64789309989673	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCCTTTCTCTTCTTT	NA	False	NA	-1	True	AATAAA	-19	NA	106074601	106055794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318_106061435_106063013_106063194_106063270_106063429_106063518_106063663_106063754_106063850_106063949_106064062_106064306_106064402_106064483_106064590_106064661_106064730_106065033_106065099_106065485_106065593_106074284
Isoform_71646_6	chr8	-	991	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	134	2	134	-2	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGACTGACTCAGTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	106198024	106194126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
Isoform_71647_4	chr8	-	2285	14	FSM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	-222	-7	-190	7	multi-exon	FALSE	canonical	0	0	junction_10	3.75428748981921	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGACTTAATGCTTATTTT	NA	False	NA	NA	False	AATAAA	-25	NA	106223724	106199047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
Isoform_71649_493	chr8	-	1583	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	42	4	42	-4	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTGCTGTCTGTCTG	NA	False	NA	-14	True	AATAAA	-14	NA	106292637	106251100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
Isoform_7165_2038	chr11	-	2743	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	31	-8	31	8	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	2038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTTGTATCTGAGAGT	NA	False	NA	-3	True	AATAAA	-23	NA	101357025	101349562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
Isoform_71650_8	chr8	-	1728	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-106	7	-106	-7	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAACCCTGCTGTCTGT	NA	False	NA	-17	True	AATAAA	-11	NA	106292785	106251103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
Isoform_71652_82	chr8	-	1417	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-1	1738	0	0	multi-exon	FALSE	canonical	3	179	junction_7	13.7637204272682	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427717	106424788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_71654_5	chr8	-	1336	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_8	60.9681155286196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427686	106424788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
Isoform_71655_4	chr8	-	1533	11	ISM	ENSMUSG00000038000.11	ENSMUST00000211870.2	2722	12	-7	2300	-7	-2	5prime_fragment	FALSE	canonical	3	32	junction_7	55.0807588909231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGGAGAGAGATTCAG	NA	False	NA	-15	True	AATAAA	-14	NA	106427724	106424791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_71656_3	chr8	-	1546	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_6	14.4179243724565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427717	106424789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_71657_6	chr8	-	1274	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	63.9878460681749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427726	106424788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
Isoform_71658_4	chr8	-	1549	6	FSM	ENSMUSG00000013155.11	ENSMUST00000212716.2	1568	6	18	1	18	0	multi-exon	FALSE	canonical	3	158	junction_2	9.8508882848198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGTTCCATAGGAG	NA	False	NA	-15	True	ATTAAA	-14	NA	106434759	106430283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180
Isoform_71659_10	chr8	-	1530	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	-254	-1	23	0	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106434819	106430282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
Isoform_71661_7	chr8	-	1290	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	45.9436211734623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106434812	106430282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
Isoform_71663_5	chr8	-	2254	4	FSM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	2	-1305	2	1305	multi-exon	FALSE	canonical	2	4	junction_2	11.1455023315337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCATGGTGTGTGGTCG	NA	False	NA	NA	False	AGTAAA	-18	NA	106485260	106442743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106444283_106449480_106449677_106454619_106454964_106485085
Isoform_71664_24	chr8	-	2036	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	57	2259	-11	1304	multi-exon	FALSE	canonical	3	21	junction_1	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCATGGTGTGTGGTC	NA	False	NA	NA	False	AGTAAA	-17	NA	106485239	106442744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106444283_106454619_106454964_106485085
Isoform_71665_3	chr8	-	2640	2	ISM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	23	8429	-11	1255	5prime_fragment	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAGACAAAACCTCAAC	NA	False	NA	NA	False	NA	NA	NA	106485239	106452477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_106454964_106485085
Isoform_71666_3	chr8	-	2329	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	142	2837	-3	-2837	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACAAATGAGAT	NA	False	NA	NA	False	AATGAA	-41	NA	106553840	106497776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
Isoform_71667_26	chr8	-	1828	14	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	76.1652672088405	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578640	106571305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_71668_11	chr8	-	1922	13	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	26	junction_3	56.8391370448215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578640	106571305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_71670_405	chr8	-	1771	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	46	-3	0	-1	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578640	106571305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_71672_15	chr8	-	1735	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	63.6958163837578	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578640	106571306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576402_106578502
Isoform_71673_10	chr8	-	1889	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	157	junction_3	26.0254166931019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578639	106571305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576556_106578502
Isoform_71674_10	chr8	-	1921	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	12	junction_10	64.1737053847596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578642	106571304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576182_106576257_106576556_106578502
Isoform_71677_14	chr8	-	2650	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	191	junction_9	18.3816293489087	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578640	106571305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
Isoform_71679_26	chr8	-	568	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	89	-11	87	2	multi-exon	FALSE	canonical	3	246	junction_1	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663570	106662364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106662538_106662627_106662780_106663327
Isoform_71680_34	chr8	-	452	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	105	-3	92	2	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663565	106662364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
Isoform_71681_12	chr8	-	554	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	3	-3	3	2	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGGCTGTGTCTTTC	NA	False	NA	-5	True	AATAAA	-22	NA	106663667	106662364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
Isoform_71682_6	chr8	-	952	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	362	-3	10	0	multi-exon	FALSE	canonical	1	3	junction_7	110.839468399582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGAAGGCTGTGTCT	NA	False	NA	-8	True	AATAAA	-19	NA	106664714	106662367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
Isoform_71683_7	chr8	-	3835	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	-24	0	-24	0	multi-exon	FALSE	canonical	2	4	junction_23	38.1304595706627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692753	106670224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
Isoform_71684_118	chr8	-	3799	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-46	2	7	1	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692722	106670223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
Isoform_71686_4	chr8	-	3938	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-18	1	intron_retention	FALSE	canonical	3	126	junction_14	19.6526132260209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692747	106670223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
Isoform_71687_27	chr8	-	1700	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	-9	7	-9	-7	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCAAGTGTCTGAGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	106706070	106700151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
Isoform_71688_3	chr8	-	3437	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	9	90	9	-90	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACACAATCCCAAGTG	NA	False	NA	NA	False	TATAAA	-26	NA	106863597	106857040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
Isoform_71689_4	chr8	-	3318	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	132	86	-29	-86	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATCCCAAGTGCTGT	NA	False	NA	NA	False	TATAAA	-30	NA	106863474	106857036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
Isoform_71690_5	chr8	-	1606	4	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	3	-276	3	276	intron_retention	FALSE	canonical	3	127	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAAGCAGTTCTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	106937562	106927072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996
Isoform_71692_44	chr8	-	1524	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-276	0	276	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAAGCAGTTCTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	106937567	106927072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
Isoform_71693_78	chr8	-	1250	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-2	0	2	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGTGGTTTTTCTGTC	NA	False	NA	-4	True	NA	NA	NA	106937567	106927346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
Isoform_71695_10	chr8	-	1621	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	0	278	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCAGTTCTTTTTTAG	NA	False	NA	-3	True	AATAAA	-21	NA	106937567	106927070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
Isoform_71697_4	chr8	-	1529	5	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	3	278	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	49.2512690191837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCAGTTCTTTTTTAG	NA	False	NA	-3	True	AATAAA	-21	NA	106937562	106927070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996_106937264_106937350
Isoform_717_10	chr10	-	2829	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	45	-1	-41	1	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTATTCCCCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	22607301	22579776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
Isoform_71701_530	chr8	-	2901	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	0	30	0	1	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620225	107610524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
Isoform_71703_20	chr8	-	2848	3	FSM	ENSMUSG00000046691.15	ENSMUST00000176090.2	615	3	-80	-2153	-2	2	multi-exon	FALSE	canonical	2	13	junction_2	168.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCGCTCCATTTTG	NA	False	NA	-29	True	AATAAA	-15	NA	107620227	107610523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107613159_107613551_107613670_107620132
Isoform_71704_16	chr8	-	2942	4	FSM	ENSMUSG00000046691.15	ENSMUST00000176515.2	694	4	8	-2256	0	-3	multi-exon	FALSE	canonical	3	5	junction_2	154.848312874245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCTGCTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-41	NA	107620225	107610497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107613159_107613551_107613684_107613932_107613989_107620132
Isoform_71705_98	chr8	-	2783	3	FSM	ENSMUSG00000117748.2	ENSMUST00000176437.9	369	3	-2	-2412	0	-3	multi-exon	FALSE	canonical	3	66	junction_1	124	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620225	107610524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107613159_107613932_107613989_107620132
Isoform_71706_14	chr8	-	2723	2	FSM	ENSMUSG00000117748.2	ENSMUST00000169312.2	2730	2	4	3	2	-3	multi-exon	FALSE	canonical	2	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620221	107610524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107613159_107620132
Isoform_71707_13	chr8	-	3294	3	NIC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	0	1	intron_retention	FALSE	canonical	3	308	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620225	107610524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_107613670_107613932_107613989_107620132
Isoform_71711_140	chr8	-	1533	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-5	-222	-5	222	multi-exon	FALSE	canonical	3	275	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAAGCTTCTACTGG	NA	False	NA	NA	False	NA	NA	NA	107775251	107772929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107773904_107774692
Isoform_71715_6	chr8	-	1753	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-219	-228	-219	228	multi-exon	FALSE	canonical	3	275	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTACTGGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	107775465	107772923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107773904_107774692
Isoform_71716_5	chr8	-	1761	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-30	-425	-30	425	multi-exon	FALSE	canonical	3	275	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGGACTGTGAGGTC	NA	False	NA	NA	False	AGTAAA	-19	NA	107775276	107772726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107773904_107774692
Isoform_71719_43	chr8	-	2951	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	0	3	0	-3	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAAGCTTCTACTGG	NA	False	NA	NA	False	NA	NA	NA	107783316	107772929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_7172_7	chr11	-	2191	10	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	9	36473	9	270	5prime_fragment	FALSE	canonical	3	276	junction_1	14.3819159423506	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAATTAATGAACAA	NA	False	NA	NA	False	AATGAA	-37	NA	101442696	101416062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
Isoform_71721_472	chr8	-	2050	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	6	2420	1	-2414	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783315	107775340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_71722_20	chr8	-	2089	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	-32	2419	-32	-2413	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCGCCTGCTGTTCCCG	NA	False	NA	-5	True	AATAAA	-15	NA	107783353	107775339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
Isoform_71724_7	chr8	-	1914	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	-22	-2409	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	63.2297398381489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCTGCTGTTCCCGACGA	NA	False	NA	-1	True	AATAAA	-19	NA	107783343	107775335	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_107775763_107778844_107779673_107780653_107780862_107782892
Isoform_71725_5	chr8	-	2679	10	FSM	ENSMUSG00000031921.18	ENSMUST00000133925.8	2666	10	-14	1	-12	1	multi-exon	FALSE	canonical	3	17	junction_3	8.85688683705762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTCTAGCTGGTTCTT	NA	False	NA	-1	True	ATTAAA	-16	NA	107823191	107796032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_71727_12	chr8	-	2668	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_3	7.27247474309048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	107823178	107796033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_71729_4	chr8	-	2480	7	ISM	ENSMUSG00000031921.18	ENSMUST00000068388.15	1915	11	-47	5591	-14	-2	5prime_fragment	FALSE	canonical	3	17	junction_1	8.76387788342327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTTGTCCTTGCGTGA	NA	False	NA	-1	True	NA	NA	NA	107823193	107802150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_7173_3	chr11	-	2235	13	FSM	ENSMUSG00000017724.15	ENSMUST00000107176.8	2377	13	140	2	-9	-2	multi-exon	FALSE	canonical	2	8	junction_11	4.75803414120673	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTATTTGCTCTTTG	NA	False	NA	-8	True	AATAAA	-17	NA	101676057	101660574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665054_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
Isoform_71730_19	chr8	-	1715	7	ISM	ENSMUSG00000031921.18	ENSMUST00000068388.15	1915	11	-38	6347	-5	44	5prime_fragment	FALSE	canonical	3	17	junction_1	8.76387788342327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAGTGAGCACTTAGC	NA	False	NA	-6	True	NA	NA	NA	107823184	107802906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_71731_7	chr8	-	2469	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	0	2	0	-2	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTTGTCCTTGCGTGA	NA	False	NA	-1	True	NA	NA	NA	107823179	107802150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_71732_17	chr8	-	1675	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	2	794	0	8	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTTGGGCCTCATTA	NA	False	NA	-4	True	NA	NA	NA	107823177	107802942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
Isoform_71736_9	chr8	-	1608	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	-57	2	-57	-2	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGGTGGCGCATGCCT	NA	False	NA	-4	True	AATAAA	-16	NA	108129895	108114858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_71737_92	chr8	-	1554	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	108129838	108114855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_71739_3	chr8	-	1788	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	-235	0	235	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAATAAAGC	NA	False	NA	NA	False	AGTAAA	-34	NA	108129838	108114621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
Isoform_71740_3	chr8	-	1475	6	NNC	ENSMUSG00000003849.9	novel	1553	6	NA	NA	5908	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	56.9750822728673	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	108123930	108114855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108123868
Isoform_71741_1272	chr8	-	1647	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	12	-1	4	1	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTTGTTTTATTTG	NA	False	NA	-2	True	AATAAA	-15	NA	108151669	108139119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
Isoform_71744_19	chr8	-	1631	9	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	161.008540146167	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTTGTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	108151669	108139121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
Isoform_71746_49	chr8	-	2389	8	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	448	junction_3	29.242825737997	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTTGTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	108151670	108139121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_108139816_108142737_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
Isoform_7175_15	chr11	-	2874	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	18	1320	-3	1006	multi-exon	FALSE	canonical	3	8	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	101875607	101863288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101865766_101872442_101872670_101875437
Isoform_71751_841	chr8	-	1547	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	35	-1	29	1	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	108315061	108307011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
Isoform_71756_22	chr8	-	4223	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	240	0	240	0	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292253	110274642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_71757_5	chr8	-	4451	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	9	3	9	-3	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTGCATTTTAAATC	NA	False	NA	-5	True	AATAAA	-16	NA	110292484	110274645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_71758_5	chr8	-	4313	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	147	3	147	-3	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTGCATTTTAAATC	NA	False	NA	-5	True	AATAAA	-16	NA	110292346	110274645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
Isoform_71759_27	chr8	-	4218	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	242	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_24	18.695314731221	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292251	110274642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
Isoform_71760_12	chr8	-	4337	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	122	-1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_24	18.695314731221	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTTAAATCTC	NA	False	NA	-3	True	AATAAA	-18	NA	110292371	110274643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
Isoform_71764_354	chr8	-	1799	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	236	4	-21	-4	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTAGAATATATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110335019	110320112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_71766_8	chr8	-	2034	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	236	-231	-21	1	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGAGTCACTGTGTC	NA	False	NA	NA	False	NA	NA	NA	110335019	110319877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_71768_12	chr8	-	2103	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	-53	-11	-3	11	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTATTGCTTAAACATT	NA	False	NA	NA	False	AATAAA	-30	NA	110335308	110320097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_71769_14	chr8	-	2038	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	0	1	0	-1	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAATATATTGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	110335255	110320109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
Isoform_7177_3	chr11	-	2645	2	FSM	ENSMUSG00000003518.14	ENSMUST00000143177.2	391	2	-2	-2252	-2	1005	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	101875606	101863289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_101865766_101875437
Isoform_71772_17	chr8	-	1904	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	23	junction_8	169.433615318803	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAATATATTGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	110335309	110320109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110335171
Isoform_71778_8	chr8	-	2451	11	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	245.924866575139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCAAATGAGTGAAT	NA	False	NA	-8	True	AATAAA	-25	NA	110419874	110397951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_71779_269	chr8	-	2338	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-20	-14	-20	14	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGAATTTGGATTTT	NA	False	NA	1	True	AATAAA	-34	NA	110419912	110397942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_71781_32	chr8	-	2255	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	4	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	212.348144270205	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	-9	True	AATAAA	-24	NA	110419888	110397952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_110399274_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_71782_4	chr8	-	2243	6	NIC	ENSMUSG00000031729.7	novel	6990	7	NA	NA	-20	-5503	intron_retention	FALSE	canonical	3	617	junction_4	22.3302485431757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110419912	110403907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
Isoform_71784_3	chr8	-	2444	3	FSM	ENSMUSG00000001672.15	ENSMUST00000051430.7	2447	3	3	0	3	0	multi-exon	TRUE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTTGCCTTGGATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110688832	110679542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110681374_110686344_110686473_110688347
Isoform_71785_72	chr8	-	1434	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	-6	3	-2	-3	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTCACCCGTTTCTTG	7610	False	NA	-15	True	AATAAA	-19	NA	110894844	110869172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
Isoform_71786_16	chr8	-	1137	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15147	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	NA	False	NA	-12	True	AATAAA	-22	NA	110879691	110869169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
Isoform_71787_3	chr8	-	1265	6	ISM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	50527	0	-12678	0	3prime_fragment	TRUE	canonical	3	39	junction_4	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	False	NA	-23	True	ATTAAA	-16	NA	111482008	111468471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862
Isoform_7179_10	chr11	-	1607	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4496	False	NA	0	True	AATAAA	-16	NA	102047199	102043371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
Isoform_71792_364	chr8	-	4289	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-17	253	-6	-253	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573425	111537123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
Isoform_71793_5	chr8	-	4544	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-17	-2	-6	2	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGCCACTGTGAAAT	NA	False	NA	-16	True	ATTAAA	-24	NA	111573425	111536868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
Isoform_71796_9	chr8	-	4398	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	3	-252	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	174.818195849288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573416	111537122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
Isoform_71798_7	chr8	-	3823	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	15	0	4	0	multi-exon	TRUE	canonical	3	94	junction_23	12.3354193641104	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAAAACTGTTTTTT	1258	False	NA	-7	True	AATAAA	-19	NA	111629076	111609094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
Isoform_71799_109	chr8	-	2546	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	5	-4	5	4	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGTACACTTGAGG	7691	False	NA	-24	True	ATTAAA	-14	NA	111724427	111701623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_71800_20	chr8	-	3006	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-11	-448	-11	448	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTATGTATAGTGT	7675	False	NA	-23	True	NA	NA	NA	111724443	111701179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_71801_3	chr8	-	1756	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-33	824	-33	-824	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGGTGGTGCACA	7653	False	NA	NA	False	NA	NA	NA	111724465	111702451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_71802_5	chr8	-	808	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	-23	-54	7	54	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGTGTCATGGGCT	7693	False	NA	NA	False	AATAAA	-22	NA	111724425	111707050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
Isoform_71803_13	chr8	-	1795	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	-8	4825	-8	-1354	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCATCTTTTTTTTTTG	NA	False	NA	1	True	AATACA	-19	NA	111754404	111734644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_71804_6	chr8	-	4541	13	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	27	1451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.332125123752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	111754369	111731839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_111732429_111732452_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_71805_15	chr8	-	1759	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	28	4825	28	-1354	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCATCTTTTTTTTTTG	NA	False	NA	1	True	AATACA	-19	NA	111754368	111734644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
Isoform_71807_10	chr8	-	4527	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	28	-1451	28	1451	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	111758355	111731839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
Isoform_71808_22	chr8	-	1725	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	25	1354	25	-1354	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCATCTTTTTTTTTTG	NA	False	NA	1	True	AATACA	-19	NA	111758358	111734644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
Isoform_7181_108	chr11	-	1550	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	22	2	22	-2	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTGTCTTTGCTTCTGT	4487	False	NA	-2	True	AATAAA	-14	NA	102047208	102043373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
Isoform_71813_18	chr8	-	4734	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	6	2281	6	823	multi-exon	TRUE	canonical	3	407	junction_22	36.1425178978997	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCTCCTTTCTGT	6434	False	NA	-22	True	ATTAAA	-22	NA	111985842	111883333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
Isoform_71824_83	chr8	-	4420	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	24	-1	-7	1	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTCTTCCGCCTGT	5520	False	NA	-8	True	AATAAA	-18	NA	112026830	111997574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
Isoform_71825_51	chr8	-	4453	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5486	False	NA	-9	True	AATAAA	-17	NA	112026864	111997575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
Isoform_71826_4	chr8	-	3535	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-32	940	-32	-940	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAGCTATTTTGGGGA	5464	False	NA	NA	False	AATAAA	-19	NA	112026886	111998515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
Isoform_71827_4	chr8	-	3568	26	NIC	ENSMUSG00000031959.16	novel	3618	27	NA	NA	-6	-107	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	12.3667942491173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCATTCTTTTTCTTGG	NA	False	NA	1	True	TATAAA	-37	NA	112248730	112176946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_112177712_112185242_112185386_112185554_112185679_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_71828_16	chr8	-	3550	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	13	1520	-9	-109	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGCATTCTTTTTCTT	NA	False	NA	-1	True	TATAAA	-35	NA	112248711	112176948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_71829_3	chr8	-	3664	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	7	1412	7	-1	multi-exon	TRUE	canonical	3	54	junction_4	5.67718239974725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATGTTTTCTGTTTCTC	NA	False	NA	NA	False	AAGAAA	-9	NA	112248717	112176840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
Isoform_71830_3	chr8	-	1808	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1160	1	-627	-1	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCCCATCCCTATCC	NA	False	NA	NA	False	AATACA	-14	NA	112355846	112352903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
Isoform_71832_192	chr8	-	3119	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	-2	-1	-2	1	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTACAGAAATGCT	NA	False	NA	-4	True	AATAAA	-15	NA	112458770	112437107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
Isoform_71834_45	chr8	-	3171	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-31	2	-31	1	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTACAGAAATGCT	NA	False	NA	-4	True	AATAAA	-15	NA	112470472	112437107	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
Isoform_71835_3	chr8	-	1929	2	FSM	ENSMUSG00000031955.11	ENSMUST00000212147.2	2007	2	-36	114	-5	-114	multi-exon	FALSE	canonical	3	133	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	112458773	112446137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112447964_112458670
Isoform_71836_5	chr8	-	2005	2	ISM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-58	9032	-58	-114	5prime_fragment	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	112470499	112446137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_112447964_112470320
Isoform_71837_599	chr8	-	1214	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-36	0	-36	0	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
Isoform_71838_11	chr8	-	3032	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-36	-1818	-36	1818	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAATTGTTTTCTGTAT	NA	False	NA	NA	False	AATAAA	-26	NA	112580959	112493304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
Isoform_7184_204	chr11	-	2249	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	7	0	7	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6363	False	NA	-1	True	AATAAA	-23	NA	102076115	102053322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
Isoform_71845_7	chr8	-	3844	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	31	3	31	-3	multi-exon	FALSE	canonical	3	19	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTTGCGTTGGGAAC	NA	False	NA	-8	True	AATAAA	-11	NA	112603351	112589672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112593129_112596219_112596391_112603134
Isoform_71847_4	chr8	-	1918	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	32	-1859	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCGCTCCGCTTCTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	112603350	112591528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_112593129_112596288_112596391_112603134
Isoform_71848_3	chr8	-	2086	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	33	-1690	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCAAGACTCTCTGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	112603349	112591359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_112593129_112596288_112596391_112603134
Isoform_71849_210	chr8	-	2893	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	85	6	3	-6	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACGTTTCCCTTGGCT	NA	False	NA	-10	True	ATTAAA	-9	NA	112660428	112638648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
Isoform_71854_4	chr8	-	3272	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	3	-6	intron_retention	FALSE	canonical	3	257	junction_2	4.66476151587624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACGTTTCCCTTGGCT	NA	False	NA	-10	True	ATTAAA	-9	NA	112660428	112638648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
Isoform_71855_4	chr8	-	3159	2	ISM	ENSMUSG00000031951.9	ENSMUST00000211866.2	2920	8	12	18458	12	-4758	5prime_fragment	FALSE	canonical	3	263	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	112660419	112657162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_112660162_112660259
Isoform_71856_14	chr8	-	2044	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	31	687	31	1	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCATAGTCTCTGTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	112718903	112698183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
Isoform_71874_56	chr8	-	2278	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	-89	0	-32	0	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737987	112720074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
Isoform_71875_75	chr8	-	2201	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	-12	0	-3	0	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737910	112720074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
Isoform_71877_334	chr8	-	2165	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	-34	0	-3	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737932	112720074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
Isoform_71879_1450	chr8	-	1990	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	18	0	-8	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737937	112720074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
Isoform_71886_36	chr8	-	2722	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	-343	32	-343	-32	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAC	1426	False	NA	33	True	NA	NA	NA	117460073	117301170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
Isoform_71887_177	chr8	-	2240	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	139	32	139	-32	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAC	1908	False	NA	33	True	NA	NA	NA	117459591	117301170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
Isoform_71893_440	chr8	-	2238	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59818	-32	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAC	NA	False	NA	33	True	NA	NA	NA	117399912	117301170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
Isoform_71895_3	chr8	-	661	4	FSM	ENSMUSG00000014633.16	ENSMUST00000131616.8	876	4	-25	240	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	157.584545209512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTCCCTTTCTTTAA	NA	False	NA	-6	True	AATAAA	-14	NA	117648186	117616257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117616599_117620826_117620899_117637822_117637974_117648089
Isoform_71896_119	chr8	-	608	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	18	833	2	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648176	117616256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
Isoform_71897_14	chr8	-	851	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	17	591	1	3	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	117648177	117616014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
Isoform_71898_6	chr8	-	481	3	FSM	ENSMUSG00000014633.16	ENSMUST00000134356.2	413	3	27	-95	3	-2	multi-exon	FALSE	canonical	3	21	junction_2	154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCCTCCCTTTCTTTA	NA	False	NA	-7	True	AATAAA	-13	NA	117648158	117616258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117616599_117620826_117620899_117648089
Isoform_71899_3	chr8	-	521	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	17	-15	0	0	multi-exon	FALSE	canonical	3	30	junction_1	157.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648161	117616256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117616599_117637866_117637974_117648089
Isoform_71900_3	chr8	-	2971	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	17	-1506	1	-8	multi-exon	FALSE	canonical	1	4	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAATTGGCTCTCTCA	8542	False	NA	NA	False	AATAAA	-20	NA	117705681	117696340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117698896_117700190_117700439_117705513
Isoform_71902_4	chr8	-	2966	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	3	7	3	-7	multi-exon	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAATTGGCTCTCTCAC	8544	False	NA	NA	False	AATAAA	-21	NA	117705679	117696339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117698896_117700190_117700439_117705517
Isoform_71904_586	chr8	-	1219	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	61	163	61	-163	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTGTGATTTTTATT	NA	False	NA	-10	True	AATAAA	-15	NA	117720215	117708711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
Isoform_71906_47	chr8	-	1260	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	21	162	21	-162	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720255	117708710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
Isoform_71907_14	chr8	-	1140	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	61	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720215	117708710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
Isoform_71909_3	chr8	-	2972	14	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53612	-203	6	203	3prime_fragment	FALSE	canonical	3	6	junction_4	7.94731170356426	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAACATTCTCTACG	NA	False	NA	NA	False	AATAAA	-3	NA	117755576	117722214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_71910_4	chr8	-	1231	5	ISM	ENSMUSG00000034416.19	ENSMUST00000162080.2	1716	8	7051	-6	7051	6	3prime_fragment	FALSE	canonical	3	20	junction_4	5.53962995154008	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTCTTATTTATTTAT	4474	False	NA	NA	False	TATAAA	-25	NA	117743783	117736055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556
Isoform_71911_7	chr8	-	2412	10	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53610	13643	4	1	internal_fragment	FALSE	canonical	3	6	junction_9	8.83735058895475	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATGTTCTTATTTA	NA	False	NA	NA	False	TATAAA	-20	NA	117755578	117736060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
Isoform_71912_3	chr8	-	1098	4	NIC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	7051	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	9.84321537348893	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATGTTCTTATTTA	4474	False	NA	NA	False	TATAAA	-20	NA	117743783	117736060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_117736470_117740602_117740737_117741601_117741930_117743556
Isoform_71913_3	chr8	-	1165	4	NIC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	6979	-4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	9.84321537348893	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTGGCATGTTCTT	4402	False	NA	NA	False	TATAAA	-15	NA	117743855	117736065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_117736470_117740602_117740737_117741601_117741930_117743556
Isoform_71914_334	chr8	-	1067	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	4	-3	4	3	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTAATTTTAGTCT	NA	False	NA	-9	True	AATAAA	-25	NA	118528678	118518380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
Isoform_71916_20	chr8	-	1125	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	-56	-1	-56	1	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGAAGTAATTTTAGT	NA	False	NA	-11	True	AATAAA	-23	NA	118528738	118518382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
Isoform_71917_4	chr8	-	3378	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	0	-2310	0	2310	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGATTGTCTCCTTAA	NA	False	NA	NA	False	NA	NA	NA	118528682	118516073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
Isoform_71922_9	chr8	-	4355	24	FSM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	-18	-1	-10	1	multi-exon	FALSE	canonical	3	10	junction_23	140.895341173728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8131	False	NA	-6	True	AATAAA	-15	NA	120285484	120234893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
Isoform_71924_11	chr8	-	4306	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_23	138.535194084391	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8131	False	NA	-6	True	AATAAA	-15	NA	120285484	120234893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
Isoform_71925_34	chr8	-	4189	23	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	108.399513584954	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8404	False	NA	-6	True	AATAAA	-15	NA	120285211	120234893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
Isoform_71926_211	chr8	-	4194	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	0	1	0	-1	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8141	False	NA	-8	True	AATAAA	-13	NA	120285474	120234895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
Isoform_71930_10	chr8	-	3099	5	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	4	11	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	55.8496866598193	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301910	120288716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301830
Isoform_71931_79	chr8	-	3122	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	30	-11	22	11	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301892	120288716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
Isoform_71932_30	chr8	-	3165	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	-23	-1	-23	1	multi-exon	FALSE	canonical	3	107	junction_4	18.9274932307477	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCGCCACCAGAGGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	120301945	120288726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
Isoform_71934_3	chr8	-	3310	15	FSM	ENSMUSG00000031832.16	ENSMUST00000147964.8	3309	15	-1	0	-1	0	multi-exon	FALSE	canonical	2	19	junction_9	11.7969643276115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGTGTAAAGCCCAC	1063	False	NA	-2	True	NA	NA	NA	120331962	120324713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329496_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
Isoform_71935_46	chr8	-	3219	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	16	1	0	-1	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTGTGTAAAGCCCA	1080	False	NA	-3	True	NA	NA	NA	120331945	120324714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
Isoform_71936_4	chr8	-	1276	6	ISM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	-3	4157	-3	-2504	5prime_fragment	FALSE	canonical	3	55	junction_3	5.2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1061	False	NA	NA	False	AATAAA	-13	NA	120331964	120328870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
Isoform_71937_3	chr8	-	3104	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2257	0	1923	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCAGGCTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	120360162	120350592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_120353159_120359624
Isoform_71938_3	chr8	-	3198	8	NIC	ENSMUSG00000034105.10	novel	3085	8	NA	NA	23	-56	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	11.4855721384239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAAGTGTCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	120505110	120486870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120504884
Isoform_71939_14	chr8	-	3094	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	-10	1	-10	-1	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGGTAGCAGGCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	120505165	120486815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_71940_33	chr8	-	3003	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	23	59	1	-59	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGCAAGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	120505132	120486873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
Isoform_71941_161	chr8	-	1619	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-22	-1	-22	1	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	120567305	120535959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
Isoform_71943_4	chr8	-	1435	3	NIC	ENSMUSG00000031827.14	novel	1596	4	NA	NA	4	1	intron_retention	FALSE	canonical	1	6	junction_1	109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	120567279	120535959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120537095_120566880_120566964_120567062
Isoform_71944_8	chr8	-	2946	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	156	-205	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828065	120807833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
Isoform_71945_3	chr8	-	3121	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	-22	-208	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCACCCTCCTGCAGCC	NA	False	NA	-9	True	AATAAA	-15	NA	120828243	120807836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
Isoform_71946_30	chr8	-	2896	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	-33	206	-33	-206	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCCTCCTGCAGCCCT	NA	False	NA	-7	True	AATAAA	-17	NA	120828254	120807834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
Isoform_71947_142	chr8	-	2706	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	158	205	158	-205	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828063	120807833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
Isoform_71949_10	chr8	-	1104	4	FSM	ENSMUSG00000031821.12	ENSMUST00000146526.8	3662	4	-81	2639	-27	272	multi-exon	FALSE	canonical	3	1091	junction_3	35.3647658929996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315800	121308010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463
Isoform_71952_380	chr8	-	1055	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	206	2639	-64	272	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315837	121308010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
Isoform_71953_414	chr8	-	1018	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	243	2639	-27	272	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315800	121308010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
Isoform_71956_10	chr8	-	1145	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	116	2639	116	272	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACACTTAGAACGG	NA	False	NA	83	True	AATACA	-10	NA	121315927	121308010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
Isoform_71961_18	chr8	-	751	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	93	0	-36	0	multi-exon	FALSE	canonical	3	48	junction_3	5.09901951359278	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGGGTCCTGGTTTTTG	NA	False	NA	-1	True	AATAAA	-13	NA	121361138	121335340	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
Isoform_71963_12	chr8	-	1167	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	592.891355983539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	-21	True	ATTAAA	-30	NA	121394826	121384570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387232_121387410_121387522_121387600_121394495
Isoform_71964_10	chr8	-	4074	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	43	825	9	-825	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCATGTATTCCAGGAG	NA	False	NA	-2	True	AATAAA	-29	NA	121394817	121381477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_71966_849	chr8	-	987	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	34	3921	0	-2	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTGTACACGGTGTA	NA	False	NA	-24	True	ATTAAA	-27	NA	121394826	121384573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_71968_15	chr8	-	1084	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	-58	3916	-58	3	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTACACGGTGTACCTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	121394918	121384568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
Isoform_71971_3	chr8	-	1926	8	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	48	junction_5	13.1413042560859	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCTTGCAGGACTCAG	NA	False	NA	NA	False	ATTAAA	-21	NA	121835076	121824677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_71972_3	chr8	-	2312	8	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	48	junction_5	13.1413042560859	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTGTATGTTTGTGT	NA	False	NA	-10	True	NA	NA	NA	121835079	121824294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
Isoform_71973_3	chr8	-	791	5	NIC	ENSMUSG00000031816.16	novel	358	4	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	34.8595395838786	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGTCTGCGGCTTAC	NA	False	NA	NA	False	AATAAA	-25	NA	121835108	121830595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_121830920_121831130_121831298_121832312_121832427_121833608_121833713_121835026
Isoform_71974_111	chr8	-	1786	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	36	2536	20	2023	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGATGCCTGCTGGTTTT	NA	False	NA	20	True	NA	NA	NA	122305509	122278714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_71975_12	chr8	-	4319	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	36	3	20	-3	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGACTTGTTTCTCGG	NA	False	NA	NA	False	AGTAAA	-18	NA	122305509	122276181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_71976_7	chr8	-	1831	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	-49	2576	-49	1983	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGAGCTGAATGACCGGT	NA	False	NA	-20	True	AATAAA	-15	NA	122305594	122278754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
Isoform_71977_3	chr8	-	1723	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	10	2022	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	107.929493236113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGATGCCTGCTGGTTT	NA	False	NA	19	True	NA	NA	NA	122305519	122278715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122305196
Isoform_71978_4	chr8	-	3528	3	NIC	ENSMUSG00000052934.15	novel	606	5	NA	NA	3	-1730	intron_retention	FALSE	canonical	3	338	junction_1	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	122305542	122284091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_122287202_122293013_122293086_122305196
Isoform_71979_92	chr8	-	2052	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	6	20	6	0	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTTCTTTCTTCTAC	442	False	NA	-25	True	AATAAA	-17	NA	122556302	122523071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
Isoform_71986_2054	chr8	-	3508	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	8	1	8	-1	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGACTGTGTTCTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	122634425	122607889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
Isoform_71999_11	chr8	-	769	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20951	19	3521	-19	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	122650692	122642883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
Isoform_720_18	chr10	-	560	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	-64	-2	26	2	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTGTATTTCTTG	NA	False	NA	-16	True	AATAAA	-15	NA	23663051	23661093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
Isoform_72000_4	chr8	-	1480	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20942	-683	3512	683	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGAACAAATAAAAAATAAAT	NA	False	NA	NA	False	AAAACA	-6	NA	122650701	122642181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
Isoform_72001_352	chr8	-	723	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	22	-1	0	1	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAGAAATTCTCCATA	NA	False	NA	NA	False	AATAAA	-19	NA	123159647	123151513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
Isoform_72002_57	chr8	-	750	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGGACAAGAAATTCTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	123159676	123151515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
Isoform_72004_253	chr8	-	1755	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	1	0	1	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170160	123160339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
Isoform_72005_3	chr8	-	1615	9	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	73.6324274691525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170136	123160339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123160915_123161542_123161652_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
Isoform_72006_58	chr8	-	1792	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	-7	-2	-7	2	multi-exon	TRUE	canonical	3	110	junction_3	7.81280999384984	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGCCTTGGTCCTGGGTT	9974	False	NA	-3	True	AATAAA	-19	NA	123202810	123192883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
Isoform_7201_17	chr11	-	3873	28	FSM	ENSMUSG00000008855.18	ENSMUST00000124077.8	3872	28	0	-1	0	-1	multi-exon	TRUE	canonical	1	1	junction_25	66.6396241448948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120965	102086573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
Isoform_72010_17	chr8	-	937	6	NIC	ENSMUSG00000006589.9	novel	660	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	634.519030447472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303603	123301374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302971_123303253_123303361_123303491
Isoform_72013_16	chr8	-	1251	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	-42	-280	-5	-1	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303634	123301374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
Isoform_72016_33	chr8	-	771	4	ISM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	210	-1	-9	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	665.62518648928	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303419	123301374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253
Isoform_72018_687	chr8	-	868	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-18	-1	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	123303647	123301374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
Isoform_72021_43	chr8	-	2501	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	59	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTCTTTTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	123338143	123304977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
Isoform_72024_5	chr8	-	4574	5	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	23127	-830	6920	501	3prime_fragment	FALSE	canonical	3	382	junction_1	9.9373034571759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCCTTCAGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	123619599	123610059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377
Isoform_72026_16	chr8	-	1160	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	-10	2655	-6	2	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGACTCTGTCCCAGGCT	9733	False	NA	-5	True	AATAAA	-18	NA	123885019	123869585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
Isoform_72027_9	chr8	-	1172	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGACTCTGTCCCAG	9733	False	NA	-8	True	AATAAA	-15	NA	123885019	123869588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
Isoform_72028_620	chr8	-	2123	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	13	4	13	-4	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTCTCAGACTTTTTT	9758	False	NA	-8	True	AATAAA	-12	NA	123939486	123931006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
Isoform_72030_11	chr8	-	3247	6	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	3	-7	intron_retention	FALSE	canonical	3	428	junction_1	71.2673838442243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACGTCTCAGACTTT	9748	False	NA	-11	True	AATAAA	-9	NA	123939496	123931009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123936975_123939404
Isoform_72031_3	chr8	-	2673	2	FSM	ENSMUSG00000033594.12	ENSMUST00000166768.3	2707	2	27	7	1	-4	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTTCTGGAAAGGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	123962945	123959000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123960985_123962256
Isoform_72032_11	chr8	-	2776	15	FSM	ENSMUSG00000001062.19	ENSMUST00000122363.8	2952	15	173	3	1	0	multi-exon	FALSE	canonical	1	6	junction_9	6.2274081482506	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCATGTGACTTGTTC	2222	False	NA	NA	False	AATAAA	-15	NA	123980914	123969097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
Isoform_72034_5	chr8	-	2773	15	NNC	ENSMUSG00000001062.19	novel	2952	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	7.05698380387565	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGTGACTTGTTCGT	2224	False	NA	NA	False	AATAAA	-17	NA	123980912	123969095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977756_123979343_123979420_123980726
Isoform_72036_55	chr8	-	4482	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	2	1	2	0	multi-exon	TRUE	canonical	3	94	junction_17	20.5305065860605	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGGCCTTATTG	NA	False	NA	-5	True	AAGAAA	-16	NA	124045313	123995039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_72037_3	chr8	-	3463	27	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	28	17285	12	604	5prime_fragment	FALSE	canonical	3	94	junction_1	14.5726094693285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	124045287	124012323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
Isoform_72038_80	chr8	-	2368	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	20	2	20	-2	multi-exon	FALSE	canonical	3	74	junction_2	2	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGCCTTGCTAGTGAT	NA	False	NA	NA	False	ATTAAA	-24	NA	124586249	124567571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_72039_27	chr8	-	3167	3	FSM	ENSMUSG00000031971.16_ENSMUSG00000085030.2	ENSMUST00000034452.12	2390	3	21	-798	21	798	multi-exon	FALSE	canonical	3	74	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGTTTTCATTTTCTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	124586248	124566771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_72040_3	chr8	-	3226	3	FSM	ENSMUSG00000031971.16_ENSMUSG00000085030.2	ENSMUST00000034452.12	2390	3	18	-854	18	854	multi-exon	FALSE	canonical	3	74	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATGCCCAGCTTGGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	124586251	124566715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124569258_124571918_124572185_124585833
Isoform_72041_270	chr8	-	3618	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	8	2182	-2	-2182	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTAGGTCTGGATCA	NA	False	NA	-22	True	ATTAAA	-18	NA	124675996	124626043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
Isoform_72042_3	chr8	-	3930	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-2	1880	-2	-1880	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAACGTTCTATGGGCT	NA	False	NA	NA	False	AATATA	-35	NA	124676006	124625741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
Isoform_72043_4	chr8	-	3546	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2173	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	86.269190699165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGATCAACCTGAAGT	NA	False	NA	-13	True	ATTAAA	-27	NA	124675996	124626034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
Isoform_72046_32	chr8	-	4085	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	220	1	220	-1	multi-exon	TRUE	canonical	3	39	junction_3	9.48536885008813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGTGTGTTATG	7097	False	NA	-1	True	ATTAAA	-17	NA	124709641	124679198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
Isoform_72049_3	chr8	-	4134	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	168	4	168	-4	multi-exon	FALSE	canonical	3	39	junction_3	9.48536885008813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGTGTCTGTGTGTT	7045	False	NA	-4	True	ATTAAA	-14	NA	124709693	124679201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
Isoform_7205_437	chr11	-	3761	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120965	102086573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_72057_1111	chr8	-	2957	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	-44	-1	-44	1	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGCATCTT	4050	False	NA	37	True	ATTAAA	-16	NA	124747791	124723055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
Isoform_72059_655	chr8	-	2997	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-23	-1	-23	1	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGCATCTT	3682	False	NA	37	True	ATTAAA	-16	NA	124748159	124723055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
Isoform_7206_13	chr11	-	3863	27	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102121070	102086576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_72066_27	chr8	-	2388	4	ISM	ENSMUSG00000050751.15	ENSMUST00000136892.3	1739	7	16659	-972	-1011	-2	3prime_fragment	FALSE	canonical	3	93	junction_3	5.71547606649408	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTTAGTATGTGATTT	NA	False	NA	-4	True	AATAAA	-23	NA	125103296	125095789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848
Isoform_72067_10	chr8	-	2742	7	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	18813	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	33.3066559914581	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCGGCTGTTAGTATGT	NA	False	NA	-9	True	AATAAA	-18	NA	125141862	125095794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125141799
Isoform_72068_6	chr8	-	2944	7	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-10499	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	34.7690794944141	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125130454	125095788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125130195
Isoform_72069_12	chr8	-	2136	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-1014	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	42.292877650971	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCTGTTAGTATGTGATT	NA	False	NA	-5	True	AATAAA	-22	NA	125103299	125095790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103283
Isoform_72070_102	chr8	-	3157	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	141	9	141	-9	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAGTCAGATCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	125389967	125362503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_72071_171	chr8	-	3123	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	175	9	175	-9	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAGTCAGATCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	125389933	125362503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_72072_8	chr8	-	3350	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	-52	9	-52	-9	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAGTCAGATCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	125390160	125362503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
Isoform_72077_13	chr8	-	3299	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	7	-5	1	4	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448710	125398066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72078_19	chr8	-	3135	21	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	107	junction_6	93.2745410066434	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448711	125398072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72079_13	chr8	-	2914	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	-13	4	0	-1	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCGTGGTCAGTTTGGT	NA	False	NA	-12	True	ATTAAA	-12	NA	125448720	125398074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_7208_9	chr11	-	4016	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_26	54.5129185058337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120985	102086573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120595
Isoform_72081_10	chr8	-	3148	21	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	121.923695400033	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448720	125398066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72082_5	chr8	-	2923	19	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	133.958038851125	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72083_49	chr8	-	3304	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448711	125398065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72084_93	chr8	-	3156	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	-8	0	5	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72087_49	chr8	-	2913	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448714	125398072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72090_22	chr8	-	3304	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	125.224797863682	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448720	125398072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72091_30	chr8	-	3145	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	109.939653901584	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448720	125398072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72092_18	chr8	-	2926	19	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	122.364122172562	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411372_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72095_10	chr8	-	1997	16	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-14	8541	-9	-333	5prime_fragment	FALSE	canonical	3	143	junction_10	122.703146749471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATATAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	125448731	125406612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72096_13	chr8	-	1829	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	8539	0	-333	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATATAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	125448722	125406612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72099_8	chr8	-	1600	12	ISM	ENSMUSG00000037300.20	ENSMUST00000041614.15	3038	18	-11	8540	0	-334	5prime_fragment	FALSE	canonical	3	125	junction_8	104.246529165125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATATAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	125448722	125406613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_7210_200	chr11	-	3767	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	24	-3	0	-1	multi-exon	FALSE	canonical	1	50	junction_25	47.7576630363989	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120968	102086573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
Isoform_72102_6	chr8	-	803	6	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	23409	0	917	5prime_fragment	FALSE	canonical	3	213	junction_2	100.720603651884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTCACTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	125448722	125421482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72103_7	chr8	-	1368	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	-38	8	-38	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCACCCTCTGTGGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	125478609	125467003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125468041_125478278
Isoform_72105_236	chr8	-	1343	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	129	868	23	-868	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGACTGTTAAGTAGC	NA	False	NA	-9	True	AATACA	-15	NA	125589730	125566094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
Isoform_72114_21	chr8	-	6646	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	-55	-5	-3	5	multi-exon	TRUE	canonical	3	164	junction_19	26.9293187551557	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296550	126144807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
Isoform_72115_3	chr8	-	5187	10	ISM	ENSMUSG00000001995.10	ENSMUST00000212987.2	6690	23	1	44438	1	-44438	5prime_fragment	FALSE	canonical	3	164	junction_7	25.1440295541948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCCACAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	126296546	126189252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
Isoform_72116_3	chr8	-	3145	2	FSM	ENSMUSG00000001995.10	ENSMUST00000212604.2	3024	2	-123	2	-18	-2	multi-exon	FALSE	canonical	3	186	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126296565	126243672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_126246646_126296393
Isoform_72117_5	chr8	-	4244	21	ISM	ENSMUSG00000060212.14	ENSMUST00000047239.13	7236	34	47145	-8	-11322	8	3prime_fragment	TRUE	canonical	2	2	junction_9	2.04633819296811	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTGTCCTTCCTAAA	7789	False	NA	NA	False	ATTAAA	-22	NA	126577911	126478238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126566322_126566433_126577021_126577114_126577758
Isoform_72118_967	chr8	-	1024	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-3	3881	1	438	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCGGTGTGTTGTCT	NA	False	NA	NA	False	ATTAAA	-34	NA	127672593	127661297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
Isoform_72125_71	chr8	-	1430	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-3	3475	1	844	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGTCAGTTGCTAC	NA	False	NA	-21	True	ATTAAA	-18	NA	127672593	127660891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
Isoform_72129_4	chr8	-	3395	11	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	52.4260431465126	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGATGCTTAGTGTAAT	NA	False	NA	-5	True	ATTAAA	-24	NA	127697798	127673926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680199_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
Isoform_7213_75	chr11	-	3688	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	22	junction_24	52.2038466015676	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120965	102086574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
Isoform_72131_25	chr8	-	1550	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	22	1852	0	2	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCAAATGGTCACT	NA	False	NA	-9	True	AATAAA	-23	NA	127697799	127675773	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
Isoform_72136_13	chr8	-	2004	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27718613	27715803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284
Isoform_72137_15	chr8	-	1035	3	NNC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	877	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTCCCCTGCTCGCCT	NA	False	NA	-13	True	AATAAA	-14	NA	27717645	27715804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284
Isoform_72139_4	chr8	-	2471	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.1111993199089	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCGCCTTTTCTCTGGGT	NA	False	NA	-2	True	AATAAA	-25	NA	27730318	27715793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719325_27730214
Isoform_7214_9	chr11	-	3466	25	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_24	56.0196982964227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120965	102086574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102120830
Isoform_72140_3	chr8	-	2768	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-236	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	40.6890648700606	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27740880	27715805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
Isoform_72141_6	chr8	-	2449	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	47.5887329102173	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27730318	27715803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719313_27730214
Isoform_72142_4	chr8	-	2249	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	47.3312792981555	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	27730318	27716024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719334_27730214
Isoform_72143_4	chr8	-	2470	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	47.3312792981555	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27730318	27715803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719334_27730214
Isoform_72144_4	chr8	-	2436	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.1111993199089	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27730318	27715805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719302_27730214
Isoform_72145_5	chr8	-	1116	3	NNC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	898	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	15.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27717624	27715805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716411_27716753_27716925_27717284
Isoform_72146_40	chr8	-	609	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATCCTTTGTGGATG	9355	False	NA	-22	True	TATAAA	-7	NA	111248783	111222002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_-_111222416_111227500_111227611_111248697
Isoform_72150_8	chr8	-	639	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATCCTTTGTGGATG	9532	False	NA	-22	True	TATAAA	-7	NA	111248606	111222002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_-_111222416_111227500_111227611_111248490
Isoform_72151_24	chr8	-	1673	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAAGTCATTTAATTCC	NA	False	NA	NA	False	AATAAA	-18	NA	125448711	125434716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
Isoform_72152_4	chr8	-	2059	3	NNC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	60.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27718612	27715805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_27716469_27716753_27716822_27717284
Isoform_72153_3	chr8	-	1689	2	NNC	ENSMUSG00000055707.14	novel	2615	3	NA	NA	-17	-24277	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCCCCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	70929572	70927606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_70929223_70929499
Isoform_72154_4	chr8	-	2106	2	Intergenic	novelGene_1905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	23656925	23653711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_23655721_23656828
Isoform_72155_4	chr8	-	2364	5	NNC	ENSMUSG00000004383.19	novel	3669	15	NA	NA	9	-65876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.75961064797157	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTCCTTTGCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	74080159	73837567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_73838293_73843030_73843114_73858458_73858761_73940752_73940941_74079093
Isoform_72156_4	chr8	-	1979	18	NNC	ENSMUSG00000037260.9	novel	485	5	NA	NA	77	1978	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	29.6162304702411	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAATGATGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	26466704	26432502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_26432728_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
Isoform_72157_3	chr8	-	2318	7	NNC	ENSMUSG00000031523.17	novel	616	3	NA	NA	-10	-8805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9294637843725	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	37081038	37048103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_37048274_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
Isoform_72158_8	chr8	+	2728	17	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-30	4199	2	1762	5prime_fragment	FALSE	canonical	3	218	junction_1	25.2904996985034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCAAATGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	3443007	3502402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814
Isoform_72159_3	chr8	+	2999	17	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-32	3930	0	-1597	5prime_fragment	TRUE	canonical	3	218	junction_1	25.2904996985034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3443005	3502671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814
Isoform_7216_21	chr11	-	3873	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	8	-1	intron_retention	FALSE	canonical	1	78	junction_13	41.1161087653002	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGTGCCGTGTGGGT	NA	False	NA	-4	True	ATTAAA	-21	NA	102120984	102086573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
Isoform_72160_41	chr8	+	5270	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	1	0	1	0	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443038	3506601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_72161_38	chr8	+	3518	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-30	1783	2	278	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTCAAAGTTCTTTT	NA	False	NA	49	True	NA	NA	NA	3443007	3504818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
Isoform_72162_6	chr8	+	2792	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	1765	intron_retention	FALSE	canonical	3	218	junction_1	25.9508937974955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAATGTGGTGGCATAG	NA	False	NA	NA	False	NA	NA	NA	3443038	3502405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501679_3501814
Isoform_72164_75	chr8	+	1966	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	33	0	1	0	multi-exon	FALSE	canonical	3	37	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6349	False	NA	16	True	AGTAAA	-17	NA	3543170	3547208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3543310_3545381
Isoform_72166_5	chr8	+	2071	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	-74	2	-74	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTTGTTACTTG	6242	False	NA	14	True	AGTAAA	-15	NA	3543063	3547206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3543310_3545381
Isoform_72169_7	chr8	+	2101	13	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	62	2	-15	1	intron_retention	FALSE	canonical	3	278	junction_8	30.3547314635169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGGTGGTCTAATTTGT	NA	False	NA	10	True	AATAAA	-11	NA	3550518	3565230	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782
Isoform_72171_305	chr8	+	2023	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	45	-3	-2	3	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	15	True	AATAAA	-16	NA	3550501	3565235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
Isoform_72177_3	chr8	+	4458	35	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	70.8391130011934	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3565407	3594261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72178_4	chr8	+	4398	34	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	64.3462568557788	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3565408	3594264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72179_3	chr8	+	4272	33	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1233	4	-3	3	3prime_fragment	FALSE	canonical	1	38	junction_1	54.2054828868815	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGTGCTGTCTTT	NA	False	NA	13	True	AATAAA	-17	NA	3566657	3594263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72180_51	chr8	+	4406	32	ISM	ENSMUSG00000004565.16	ENSMUST00000111070.4	4496	35	1479	3	0	3	3prime_fragment	FALSE	canonical	1	71	junction_27	50.3064283424121	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGTGCTGTCTTT	NA	False	NA	13	True	AATAAA	-17	NA	3566862	3594263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72182_82	chr8	+	4394	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1438	4	0	3	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGTGCTGTCTTT	NA	False	NA	13	True	AATAAA	-17	NA	3566862	3594263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72184_5	chr8	+	984	5	ISM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	24368	-2	167	2	3prime_fragment	FALSE	canonical	3	270	junction_2	13.1624465810882	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	3448	False	NA	12	True	AATAAA	-16	NA	3591241	3594262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
Isoform_72185_4	chr8	+	841	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	-19	-185	-19	185	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGCCTCTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	3617970	3623835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3618097_3623120
Isoform_72186_3	chr8	+	965	3	FSM	ENSMUSG00000065952.14	ENSMUST00000153341.8	960	3	-15	10	-10	-10	multi-exon	FALSE	canonical	3	24	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATTTATTTATCT	NA	False	NA	14	True	ATTAAA	-42	NA	3617979	3628587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3618097_3623120_3623222_3627840
Isoform_72187_4	chr8	+	745	5	ISM	ENSMUSG00000065952.14	ENSMUST00000136592.2	1621	6	-19	4255	-11	1924	5prime_fragment	FALSE	canonical	3	9	junction_4	8.46684711093805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTGCGATATTCTC	NA	False	NA	NA	False	NA	NA	NA	3617978	3630521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3618097_3623120_3623222_3627840_3628046_3629722_3629922_3630399
Isoform_72188_3	chr8	+	655	4	NIC	ENSMUSG00000065952.14	novel	1621	6	NA	NA	-22	1924	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTGCGATATTCTC	NA	False	NA	NA	False	NA	NA	NA	3617967	3630521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399
Isoform_72189_3	chr8	+	4146	19	FSM	ENSMUSG00000044433.17	ENSMUST00000207432.2	3865	19	-136	-145	-118	-2	multi-exon	FALSE	canonical	2	4	junction_5	49.6220592623089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAAGTTTACGTCTCGTG	6536	False	NA	51	True	NA	NA	NA	3637675	3659073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72190_3	chr8	+	4140	18	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-138	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	42.9626859907903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTACGTCTCGTGTTTT	6516	False	NA	55	True	NA	NA	NA	3637655	3659077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72191_6	chr8	+	4114	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-136	-146	-118	-1	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	6536	False	NA	52	True	NA	NA	NA	3637675	3659074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72193_4	chr8	+	4180	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-202	-146	-184	-1	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	6470	False	NA	52	True	NA	NA	NA	3637609	3659074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72194_15	chr8	+	4073	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	-118	-30	-118	3	multi-exon	FALSE	canonical	3	47	junction_7	34.0677174903163	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTACGTCTCGTGTTTTC	6536	False	NA	56	True	NA	NA	NA	3637675	3659078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72195_10	chr8	+	4146	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	-192	-29	-192	2	multi-exon	TRUE	canonical	3	47	junction_7	34.0677174903163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTACGTCTCGTGTTTT	6462	False	NA	55	True	NA	NA	NA	3637601	3659077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72198_21	chr8	+	4098	17	FSM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	352	0	-149	0	multi-exon	FALSE	canonical	3	66	junction_7	31.8251448347058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6505	False	NA	53	True	NA	NA	NA	3637644	3659075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_722_5	chr10	-	571	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	3	10	3	5	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTTCTTGTTT	NA	False	NA	-13	True	AATAAA	-18	NA	23663170	23661090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
Isoform_72201_10	chr8	+	3569	15	ISM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	11313	40	-1942	-6	3prime_fragment	FALSE	canonical	3	66	junction_5	31.8741946676977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGCTGAGACACGG	7876	False	NA	13	True	AATAAA	-9	NA	3648605	3659035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
Isoform_72202_50	chr8	+	306	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	24	863	20	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5611	False	NA	10	True	NA	NA	NA	3671574	3673372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
Isoform_72203_4	chr8	+	1170	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	16	7	12	-7	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGCCCTACTCTTCA	5603	False	NA	NA	False	AAAACA	-7	NA	3671566	3674228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
Isoform_72204_4	chr8	+	383	4	FSM	ENSMUSG00000087687.4	ENSMUST00000207389.2	363	4	-20	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_1	322.072800603977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5618	False	NA	10	True	NA	NA	NA	3671581	3673372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3671696_3672341_3672429_3672592_3672626_3673223
Isoform_72206_82	chr8	+	1862	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-17	2	0	-1	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGCTCACCTCATTT	4585	False	NA	14	True	AATAAA	-20	NA	3681152	3692793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
Isoform_72207_9	chr8	+	2687	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-19	-821	-1	-28	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAAATACAG	4583	False	NA	NA	False	NA	NA	NA	3681150	3693616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
Isoform_72208_451	chr8	+	1861	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	849	0	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_72209_67	chr8	+	2682	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	28	0	-28	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAAATACAG	4585	False	NA	NA	False	NA	NA	NA	3681152	3693616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_72212_8	chr8	+	1779	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	88.3019356181394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3681205_3682219_3682270_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_72213_7	chr8	+	1938	19	NIC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	103.964203241094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
Isoform_72214_15	chr8	+	1932	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGGCTCACCTCATT	4585	False	NA	13	True	AATAAA	-19	NA	3681152	3692792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
Isoform_72217_22	chr8	+	1999	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	213	334	2	1	multi-exon	FALSE	canonical	3	198	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGCTATTATTATTGT	NA	False	NA	15	True	NA	NA	NA	3726511	3730921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3726604_3729014
Isoform_72218_10	chr8	+	2025	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	187	334	-24	1	multi-exon	FALSE	canonical	3	198	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGCTATTATTATTGT	NA	False	NA	15	True	NA	NA	NA	3726485	3730921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3726604_3729014
Isoform_72219_77	chr8	+	708	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	1627	0	-1292	multi-exon	FALSE	canonical	3	198	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTTGTGTCTTGTG	NA	False	NA	23	True	GATAAA	-23	NA	3726509	3729628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3726604_3729014
Isoform_72220_36	chr8	+	738	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	178	1630	-33	-1295	multi-exon	FALSE	canonical	3	198	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTGTGTTGTGTCTT	NA	False	NA	20	True	GATAAA	-20	NA	3726476	3729625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3726604_3729014
Isoform_72221_4	chr8	+	1554	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	-12	0	-12	0	multi-exon	FALSE	canonical	3	12	junction_10	5.9464274989274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCTCCGGATGTAGT	NA	False	NA	NA	False	AATAAA	-24	NA	4216554	4243701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
Isoform_72222_10	chr8	+	3980	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	-46	4	-46	1	multi-exon	FALSE	canonical	3	9	junction_12	7.46144290294483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATGCCGAATAGAGA	NA	False	NA	3	True	AATAAA	-18	NA	4216520	4258047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_72223_9	chr8	+	3888	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	-159	-1	6	1	multi-exon	FALSE	canonical	3	9	junction_13	6.86285402963656	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATGCCGAATAGAGA	NA	False	NA	3	True	AATAAA	-18	NA	4216579	4258047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_72224_5	chr8	+	3863	19	NIC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.20899318902754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216561	4258046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_72225_3	chr8	+	3929	20	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7.81397285285484	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216566	4258046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_4216764_4233491_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_72226_8	chr8	+	2149	5	ISM	ENSMUSG00000011832.17	ENSMUST00000175650.8	2451	7	2092	-2	-262	2	3prime_fragment	FALSE	canonical	3	19	junction_1	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGGATGCCGAATAG	2333	False	NA	0	True	AATAAA	-15	NA	4255466	4258044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
Isoform_7223_6	chr11	-	3681	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	7	0	5	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187450	102180125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_72230_3	chr8	+	3453	12	FSM	ENSMUSG00000002948.20	ENSMUST00000062686.11	3525	12	69	3	1	-2	multi-exon	FALSE	canonical	3	15	junction_1	114.000217485656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTCTGGTGTCCTAAGCC	NA	False	NA	17	True	AATAAA	-18	NA	4288829	4297894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
Isoform_72232_86	chr8	+	3397	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	101	-1	12	0	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288840	4297897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
Isoform_72234_5	chr8	+	3444	12	NNC	ENSMUSG00000002948.20	novel	3525	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	90.5489228981578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288771	4297897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4296987_4297008
Isoform_72236_77	chr8	+	1528	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	8	0	-6	0	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	16	True	AATAAA	-16	NA	4303087	4306220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
Isoform_72237_3	chr8	+	2661	2	ISM	ENSMUSG00000023235.15	ENSMUST00000153254.3	362	3	-10	2940	1	2666	5prime_fragment	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4375230	4380359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_4375289_4377756
Isoform_72238_3	chr8	+	991	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	16	51	16	-29	multi-exon	FALSE	canonical	2	8	junction_1	5.67097875150313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATTAAAAAATAAAAAC	7929	False	NA	NA	False	NA	NA	NA	4399603	4409969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
Isoform_72239_6	chr8	+	2650	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	265	6560	6	-2	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4543463	4575120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_7224_5	chr11	-	3868	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-180	0	-180	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187637	102180125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
Isoform_72240_7	chr8	+	2397	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	278	6800	-5	-242	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAAATGCTGGGGCA	NA	False	NA	NA	False	NA	NA	NA	4543476	4574880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_72241_51	chr8	+	1568	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	283	7624	0	5	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGCGCCAGAGCTTA	NA	False	NA	16	True	AATAAA	-17	NA	4543481	4574056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_72242_5	chr8	+	1761	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	89	7625	89	4	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTGCGCCAGAGCTT	NA	False	NA	15	True	AATAAA	-16	NA	4543287	4574055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_72244_18	chr8	+	2184	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	283	7008	0	-450	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGAGCCTGGCATGG	NA	False	NA	2	True	AATAAA	-14	NA	4543481	4574672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_72245_3	chr8	+	2262	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	205	7008	-45	-450	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGAGCCTGGCATGG	NA	False	NA	2	True	AATAAA	-14	NA	4543403	4574672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
Isoform_72247_5	chr8	+	715	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	3	1646	3	-795	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACATAAAAGAATACACAC	NA	False	NA	NA	False	NA	NA	NA	4663169	4678585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
Isoform_72248_7	chr8	+	2904	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	135	2152	125	-2152	multi-exon	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTGCTATGTAGAAT	NA	False	NA	9	True	ATTAAA	-19	NA	10027841	10040003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_10028020_10032863_10032971_10037384
Isoform_72249_7	chr8	+	3004	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	2150	27	-2150	multi-exon	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGCTATGTAGAATGA	NA	False	NA	11	True	ATTAAA	-21	NA	10027743	10040005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_10028020_10032863_10032971_10037384
Isoform_7225_3	chr11	-	3062	9	ISM	ENSMUSG00000059995.13	ENSMUST00000137387.8	3408	12	1045	3	221	-2	3prime_fragment	FALSE	canonical	3	20	junction_7	49.1234096434684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCCGGCCTGCCCACTC	509	False	NA	-9	True	AATAAA	-16	NA	102184768	102180128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669
Isoform_72251_45	chr8	+	2892	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	32	2150	32	-2150	multi-exon	FALSE	canonical	3	144	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGCTATGTAGAATGA	NA	False	NA	11	True	ATTAAA	-21	NA	10027748	10040005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_10028020_10037384
Isoform_72252_6	chr8	+	4952	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	119	3	119	-3	multi-exon	FALSE	canonical	3	144	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTGAGTCTTATTCT	NA	False	NA	16	True	AATAAA	-17	NA	10027835	10042152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_10028020_10037384
Isoform_72256_3	chr8	+	5070	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	0	4	0	-4	multi-exon	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTAGTGAGTCTTATTC	NA	False	NA	15	True	AATAAA	-16	NA	10027716	10042151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_10028020_10037384
Isoform_72257_4	chr8	+	6401	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	47	2	47	-2	multi-exon	TRUE	canonical	3	15	junction_4	6.83737233737166	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGTTTTCTGTCCCCC	8527	False	NA	8	True	AATAAA	-18	NA	11362851	11499285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
Isoform_72258_105	chr8	+	1237	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	68	2	6	-2	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547573	11563285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_72260_3	chr8	+	1303	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	0	4	0	-4	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547505	11563283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_72261_3	chr8	+	1307	9	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	162	junction_1	41.5120464443756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547583	11563285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_72262_35	chr8	+	1323	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	34	2	9	-2	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547601	11563285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
Isoform_72263_7	chr8	+	2190	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	624	0	579	0	multi-exon	FALSE	canonical	3	454	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606689	11613251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11607046_11611417
Isoform_72265_16	chr8	+	1942	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	30	-1	30	0	multi-exon	FALSE	canonical	3	111	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11608458	11613251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11608567_11611417
Isoform_72269_7	chr8	+	4584	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	22	-8	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	19.8655480669424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAAACGTGTTGCTTCA	NA	False	NA	9	True	ATTAAA	-19	NA	11778198	11885211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_72271_3	chr8	+	2622	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-18	1847	-18	1072	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGGGATCTGAGCACC	9610	False	NA	NA	False	TATAAA	-25	NA	11808335	11883372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_72272_75	chr8	+	4432	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	14	5	14	-5	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTGTTGCTTCATCT	9642	False	NA	12	True	ATTAAA	-22	NA	11808367	11885214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
Isoform_72273_3	chr8	+	1087	8	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	14	1281	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	32.945223555199	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAACTCTGAGAAT	9642	False	NA	NA	False	NA	NA	NA	11808367	11852240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11852001
Isoform_72275_4	chr8	+	5250	30	FSM	ENSMUSG00000031442.22	ENSMUST00000095456.10	3926	30	114	-1438	-7	-10	multi-exon	FALSE	canonical	3	19	junction_2	5.78098074781942	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGCAAAGACTCAGTAGC	8018	False	NA	1	True	AATAAA	-8	NA	12923940	13070491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
Isoform_72276_8	chr8	+	3450	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-17	-2	combination_of_known_splicesites	TRUE	canonical	3	14	junction_2	84.9753475343368	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTTTACTAATACATT	NA	False	NA	24	True	AATAAA	-21	NA	13155722	13197938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
Isoform_72279_81	chr8	+	2104	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	117	8	117	-8	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8319	False	NA	13	True	AATAAA	-14	NA	13209277	13225330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
Isoform_72280_4	chr8	+	2235	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	-14	8	-14	-8	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8188	False	NA	13	True	AATAAA	-14	NA	13209146	13225330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
Isoform_72287_3	chr8	+	3936	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-270	-1	-270	1	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13337919	13347618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
Isoform_72288_5	chr8	+	3641	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	25	-1	4	1	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13338214	13347618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
Isoform_72289_4	chr8	+	3105	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-302	1532	-281	-4	multi-exon	TRUE	canonical	3	15	junction_7	13.4873912311545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTATTAGTTTTAAT	NA	False	NA	1	True	AATAAA	-13	NA	13337908	13371392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
Isoform_72295_28	chr8	+	2589	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	-83	5	-83	1	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2020	False	NA	89	True	AATAAA	-19	NA	13388667	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72297_122	chr8	+	2506	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	0	5	0	1	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2103	False	NA	89	True	AATAAA	-19	NA	13388750	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_723_50	chr10	-	498	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	75	11	2	4	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTGTATTTCTTGTT	NA	False	NA	-14	True	AATAAA	-17	NA	23663098	23661091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
Isoform_72305_29	chr8	+	2413	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	9	-1	9	1	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2129	False	NA	89	True	AATAAA	-19	NA	13388776	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72308_274	chr8	+	2567	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2156	False	NA	89	True	AATAAA	-19	NA	13388803	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72309_37	chr8	+	2605	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2118	False	NA	89	True	AATAAA	-19	NA	13388765	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72311_10	chr8	+	2668	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	377.101472860202	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2158	False	NA	89	True	AATAAA	-19	NA	13388805	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72314_30	chr8	+	2476	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCTGTGTTTCTGT	2180	False	NA	89	True	AATAAA	-19	NA	13388827	13428443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
Isoform_72324_612	chr8	+	2281	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	17	3	16	-3	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807692	13831935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
Isoform_72329_11	chr8	+	2237	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	166.691319791254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGAAGTTTCCAAGCT	NA	False	NA	8	True	AATAAA	-15	NA	13807675	13831929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
Isoform_72331_7	chr8	+	844	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	6	281	6	-281	multi-exon	FALSE	canonical	3	312	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGTATCCTTTGAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	13835650	13836756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13835885_13836146
Isoform_72334_8	chr8	+	2015	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	22	20	2	-20	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGTGCTAAAGG	NA	False	NA	NA	False	NA	NA	NA	13835636	13849173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
Isoform_72335_159	chr8	+	1549	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	33	475	3	-475	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCAGGTTTTTTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	13835647	13848718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
Isoform_72337_144	chr8	+	3950	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	58	5	-5	-5	multi-exon	FALSE	canonical	3	209	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATCTTCATGTGTACTT	NA	False	NA	12	True	ATTAAA	-14	NA	13919698	13931634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13919812_13927797
Isoform_72343_37	chr8	+	2043	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-41	10	-41	-9	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGTTATATAATTTTT	NA	False	NA	4	True	AATAAA	-10	NA	13957761	13990512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
Isoform_72345_14	chr8	+	2030	10	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-31	-9	combination_of_known_junctions	FALSE	canonical	2	19	junction_7	29.6514734295483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGTTATATAATTTTT	NA	False	NA	4	True	AATAAA	-10	NA	13957771	13990512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13989562
Isoform_72347_39	chr8	+	2456	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-141	2880	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938862	14947939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
Isoform_72349_162	chr8	+	2334	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	742	3781	-151	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938852	14947939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_14939119_14944571_14945231_14946530
Isoform_72350_8	chr8	+	2431	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	722	3704	-171	2957	multi-exon	FALSE	canonical	3	162	junction_1	24.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTAGCTCCTGTGT	NA	False	NA	87	True	AAGAAA	-40	NA	14938832	14948016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_14939119_14944571_14945231_14946530
Isoform_72353_3	chr8	+	6110	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	742	5	-151	-5	multi-exon	FALSE	canonical	3	162	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTTATGTGCCATATA	NA	False	NA	1	True	NA	NA	NA	14938852	14951715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_14939119_14944571_14945231_14946530
Isoform_72354_4	chr8	+	5372	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-41	5	-20	-2	multi-exon	TRUE	canonical	3	16	junction_8	7.20558387346064	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTTCAAGTTGCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	14961696	15051080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
Isoform_72359_4	chr8	+	2497	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	-432	2	-14	-2	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTGTTGACCTGTATA	NA	False	NA	NA	False	ATTAAA	-20	NA	18645165	18682915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
Isoform_72362_7	chr8	+	4638	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	19	5	-14	-5	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAGAAGCAATAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	18645165	18853200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
Isoform_72366_5	chr8	+	3463	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-14	-942	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGAGATTTGTGTGTAC	NA	False	NA	3	True	NA	NA	NA	18645165	18852263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
Isoform_72371_24	chr8	+	2830	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	3	7946	1	-6	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAATTTGCTTCTTGTTT	NA	False	NA	9	True	AATAAA	-19	NA	18896295	18933431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
Isoform_72372_32	chr8	+	1212	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	258	9309	256	-1369	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTGTTTTGTTT	NA	False	NA	14	True	ATTAAA	-18	NA	18896550	18932068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
Isoform_72375_27	chr8	+	1456	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	14	9309	12	-1369	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTGTTTTGTTT	NA	False	NA	14	True	ATTAAA	-18	NA	18896306	18932068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
Isoform_72381_3	chr8	+	3320	7	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	22	-1370	intron_retention	FALSE	non_canonical	0	0	junction_5	260.421879947818	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTTGTTTTGTT	NA	False	NA	13	True	ATTAAA	-17	NA	18896316	18932067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929621_18929745_18931753
Isoform_72382_17	chr8	+	664	2	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	-13	14650	-13	-14650	5prime_fragment	FALSE	canonical	3	474	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTAAAACAATGAAACAG	7175	False	NA	NA	False	AATGAA	-22	NA	20143834	20158344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_20143957_20157802
Isoform_72391_8	chr8	+	4286	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	32	10384	32	-774	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAATATAAATAGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	20016497	20045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_72395_10	chr8	+	976	3	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	93	-9388	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	12	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAACAGAAGAAACAAACAG	NA	False	NA	NA	False	NA	NA	NA	20016558	20036500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_20016689_20030550_20030757_20035860
Isoform_72399_7	chr8	+	4130	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	-774	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAATATAAATAGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	20016486	20045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
Isoform_724_13	chr10	-	2304	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-10	-5	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTTTCTTCTTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	25172981	25044992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
Isoform_72415_3	chr8	+	2928	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-10	2042	-10	-294	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATTTTAATGAACTTTT	NA	False	NA	NA	False	NA	NA	NA	22550726	22559601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
Isoform_72417_6	chr8	+	4963	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	51	junction_2	7.11805216802087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGGCTCCCTTTGG	NA	False	NA	3	True	NA	NA	NA	22550735	22561641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
Isoform_7242_241	chr11	-	3240	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-21	67	3	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9140	False	NA	-7	True	NA	NA	NA	102207527	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_72422_28	chr8	+	3547	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	24	3	24	-3	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGGGAATTTTTCTGT	NA	False	NA	6	True	GATAAA	-19	NA	22682848	22710856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
Isoform_72427_7	chr8	+	3569	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	-3	8	-3	-8	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAATGTGGGAATTTT	NA	False	NA	1	True	GATAAA	-14	NA	22682821	22710851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
Isoform_7243_103	chr11	-	3286	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-67	67	-42	2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9094	False	NA	-7	True	NA	NA	NA	102207573	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_72430_4	chr8	+	2463	3	ISM	ENSMUSG00000031480.16	ENSMUST00000162447.2	3273	4	15901	476	15901	-476	3prime_fragment	FALSE	canonical	2	2	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTATGATGCATTTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	22733278	22749917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_22733973_22742168_22742328_22748307
Isoform_72432_187	chr8	+	1267	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	60	188	23	-188	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCCTGTGTTGATCA	NA	False	NA	12	True	ATTAAA	-21	NA	22901436	22919493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
Isoform_72434_7	chr8	+	1465	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	50	0	13	0	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTAATTTGC	NA	False	NA	NA	False	NA	NA	NA	22901426	22919681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
Isoform_72437_1056	chr8	+	3615	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-45	-4	-45	4	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGACGTCTTTTTCTTT	NA	False	NA	19	True	AATAAA	-24	NA	22966758	23059632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
Isoform_72442_13	chr8	+	3631	11	NIC	ENSMUSG00000037656.10	novel	436	3	NA	NA	222	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	165.224362610361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTACTTCTGACGTCT	NA	False	NA	11	True	AATAAA	-16	NA	22996463	23059624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
Isoform_72446_3	chr8	+	2542	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	-20	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_8	2.12619614785927	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCACTGGTGCATATCC	NA	False	NA	NA	False	AATAAA	-21	NA	23247742	23272857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
Isoform_72448_5	chr8	+	3518	16	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-3	10553	-3	9061	5prime_fragment	FALSE	canonical	2	9	junction_7	4.56362429069996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGGTGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	23349561	23422722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130
Isoform_72449_4	chr8	+	3929	18	FSM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-3	5187	-3	-5187	multi-exon	FALSE	canonical	2	9	junction_7	4.68894009020697	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGAAAAAGGGATGG	NA	False	NA	NA	False	NA	NA	NA	23349561	23428088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
Isoform_7245_21	chr11	-	3305	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-21	2	3	-2	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAAGGTC	9140	False	NA	58	True	NA	NA	NA	102207527	102196751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_72450_3	chr8	+	3432	15	ISM	ENSMUSG00000031540.15	ENSMUST00000110696.8	9041	17	11	10553	-3	9061	5prime_fragment	FALSE	canonical	2	6	junction_1	4.43547848464572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGGTGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	23349561	23422722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_23349649_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130
Isoform_72455_29	chr8	+	2629	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-2	-1718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCCAGTTCTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	23901515	23937930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_23902345_23907345_23907424_23936181_23937023_23937049
Isoform_72456_115	chr8	+	4345	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCGTGAGTTGTGATTGA	NA	False	NA	23	True	ACTAAA	-16	NA	23901515	23939647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_23902345_23907345_23907424_23936181_23937024_23937051
Isoform_72470_193	chr8	+	1212	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	69	0	21	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	14	True	AATAAA	-14	NA	25507295	25513276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
Isoform_72471_17	chr8	+	1278	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	2	1	2	1	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTGAGTATTT	NA	False	NA	13	True	AATAAA	-13	NA	25507228	25513275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
Isoform_72473_8	chr8	+	4045	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATCCTGGGCGTGT	NA	False	NA	13	True	AATAAA	-16	NA	26008807	26064799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_72474_34	chr8	+	4053	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-3	-4	3	0	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008807	26064801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_72477_3	chr8	+	4082	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCTGGGCGTGTGAAAA	NA	False	NA	18	True	AATAAA	-21	NA	26008781	26064804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_72478_42	chr8	+	4094	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	4	927	4	6	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	21	True	AATAAA	-24	NA	26008778	26064807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
Isoform_72482_5	chr8	+	2466	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	-46	-4	-11	4	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTGCTGATTTGTT	9674	False	NA	NA	False	ATTAAA	-17	NA	26092288	26153619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
Isoform_72483_18	chr8	+	3847	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	-35	6	-35	-6	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATCCTTACATATTTA	9650	False	NA	NA	False	AATAAA	-20	NA	26092264	26164926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
Isoform_72484_9	chr8	+	5159	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-28	4974	-28	1	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9657	False	NA	NA	False	ATTAAA	-18	NA	26092271	26204720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
Isoform_72485_3	chr8	+	1413	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	3	3	0	1	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATACTGTGTGTGTGTG	NA	False	NA	14	True	AATAAA	-26	NA	26210090	26214911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
Isoform_72486_11	chr8	+	1449	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	33	1	6	-1	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTGTGTGTGTGAG	NA	False	NA	16	True	AATAAA	-28	NA	26210096	26214913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
Isoform_72487_3	chr8	+	2094	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	0	5	0	-1	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACATACTGTGTGTGTG	NA	False	NA	12	True	AATAAA	-24	NA	26210090	26214909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
Isoform_72488_113	chr8	+	1199	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	23	1441	23	410	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTTTCTGGTGGAG	8463	False	NA	21	True	AATAAA	-24	NA	26275338	26292562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
Isoform_72490_6	chr8	+	1322	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	7	410	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	192.3856803403	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTTTCTGGTGGAG	8447	False	NA	21	True	AATAAA	-24	NA	26275322	26292562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980_26287088_26291955
Isoform_72492_6	chr8	+	3776	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	155	-2	-26	2	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTGTTATGTTTCT	NA	False	NA	9	True	AATAAA	-19	NA	26609550	26633901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_72493_6	chr8	+	3910	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	16	3	1	-3	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTAATGTGTTATG	NA	False	NA	4	True	AATAAA	-14	NA	26609411	26633896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_72494_3	chr8	+	3913	8	FSM	ENSMUSG00000013878.19	ENSMUST00000209707.2	1000	8	-6	-2907	-1	3	multi-exon	FALSE	canonical	3	12	junction_1	23.7469654344916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609409	26633902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26609629_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
Isoform_72495_20	chr8	+	2223	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	72	0	-20	0	multi-exon	FALSE	canonical	3	177	junction_1	13	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26648240	26654179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26648550_26650802_26650999_26652461
Isoform_72497_51	chr8	+	1006	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	75	1214	-17	162	multi-exon	FALSE	canonical	3	177	junction_1	13	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTAATTTTTTTGTTT	NA	False	NA	22	True	AATAAA	-17	NA	26648243	26652965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_26648550_26650802_26650999_26652461
Isoform_72498_111	chr8	+	3921	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	21	896	13	-896	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTACCAGTAGATTG	NA	False	NA	30	True	AATAAA	-27	NA	27513847	27529460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_72501_4	chr8	+	4842	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	0	-4	0	4	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCATTGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	27513826	27530360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_72502_7	chr8	+	4071	12	NIC	ENSMUSG00000031483.9	novel	940	10	NA	NA	19	-905	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513947	27529451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
Isoform_72503_3	chr8	+	2152	8	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	88.6271713990923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGTGTGATGAGTGAA	NA	False	NA	12	True	ATTAAA	-14	NA	27532591	27544594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535827_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
Isoform_72504_176	chr8	+	1988	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	51	1564	8	1	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	14	True	ATTAAA	-16	NA	27532633	27544596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
Isoform_72505_5	chr8	+	3583	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	22	-2	16	2	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGGGTGTTTTT	NA	False	NA	27	True	AATAAA	-19	NA	27532604	27546162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
Isoform_72506_7	chr8	+	2079	8	ISM	ENSMUSG00000031486.16	ENSMUST00000178514.8	5129	16	-98	10407	-98	-8595	5prime_fragment	FALSE	canonical	3	17	junction_4	4.03049599419025	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGCAATTAGTGGCA	NA	False	NA	NA	False	AATAAA	-19	NA	27575512	27603056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370
Isoform_72509_527	chr8	+	820	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	18	1159	18	17	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750374	27765543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_7251_117	chr11	-	3484	21	FSM	ENSMUSG00000020923.18	ENSMUST00000107123.10	2759	21	-417	-308	-181	3	multi-exon	FALSE	canonical	3	90	junction_20	173.298954122637	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9959	False	NA	-6	True	NA	NA	NA	102208878	102196815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
Isoform_72510_5475	chr8	+	789	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	49	1159	49	17	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	5475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750405	27765543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_72511_1465	chr8	+	846	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	49	1102	49	74	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCTCTGTCCAGTG	NA	False	NA	-51	True	NA	NA	NA	27750405	27765600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_72512_146	chr8	+	864	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	18	1115	18	61	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACGACATGATTACTAT	NA	False	NA	61	True	NA	NA	NA	27750374	27765587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_72513_165	chr8	+	914	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	49	1034	49	142	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGAGTAATCTATC	NA	False	NA	17	True	AAAAAG	-10	NA	27750405	27765668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27750579_27763350_27763531_27765107
Isoform_72519_7	chr8	+	1750	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	0	-24	0	24	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAATCAAATTTTTGGC	NA	False	NA	1	True	ATTAAA	-15	NA	31601857	31619685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
Isoform_72520_19	chr8	+	1874	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	25	5031	0	-5031	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCGTTTCACTCTCTTC	NA	False	NA	14	True	GATAAA	-26	NA	31640367	31646051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
Isoform_72522_7	chr8	+	1909	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	-8	5029	-8	-5029	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTTTCACTCTCTTCAT	NA	False	NA	16	True	GATAAA	-28	NA	31640334	31646053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
Isoform_72523_445	chr8	+	2141	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	25	967	0	-967	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATCTCTTCTATTT	NA	False	NA	4	True	ATTAAA	-15	NA	31640367	31650115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
Isoform_72525_12	chr8	+	2978	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	0	674	0	-674	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTCAGCTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	31640367	31652693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
Isoform_72526_3	chr8	+	3052	5	ISM	ENSMUSG00000046152.17	ENSMUST00000161502.2	3527	6	-4	23948	0	-4	5prime_fragment	FALSE	canonical	2	4	junction_2	15.833114033569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCCACTGTCGCAGAC	NA	False	NA	2	True	AATAAA	-12	NA	31677370	31727818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31725622
Isoform_72527_4	chr8	+	3266	7	NNC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	17.2980409937722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTATTCTTTGGAGG	NA	False	NA	11	True	AATAAA	-24	NA	31677341	31751512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_31677491_31684981_31685318_31691237_31691533_31715829_31715930_31725622_31726459_31749927_31750940_31750974
Isoform_72528_18	chr8	+	2960	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	-1	3	0	-3	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCACTGTCGCAGACT	NA	False	NA	3	True	AATAAA	-13	NA	31677358	31727819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
Isoform_72529_12	chr8	+	3170	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	14	-1	2	1	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTATTCTTTGGAGG	NA	False	NA	11	True	AATAAA	-24	NA	31677372	31751512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
Isoform_72530_6	chr8	+	2328	4	FSM	ENSMUSG00000046152.17	ENSMUST00000110527.9	2327	4	8	-9	4	1	multi-exon	FALSE	canonical	0	0	junction_3	19.3964487013015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTATTCTTTGGAGG	NA	False	NA	11	True	AATAAA	-24	NA	31677378	31751512	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31749927
Isoform_72533_1519	chr8	+	2301	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	371	1	371	-1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	773	False	NA	13	True	TATAAA	-16	NA	34143636	34188190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_72535_247	chr8	+	2379	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	292	2	292	-2	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	694	False	NA	12	True	TATAAA	-15	NA	34143557	34188189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_72537_159	chr8	+	2410	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	261	2	261	-2	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	663	False	NA	12	True	TATAAA	-15	NA	34143526	34188189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
Isoform_72548_75	chr8	+	1364	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	93	177	93	-177	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTCTCTTACTTCT	5118	False	NA	40	True	AATAAA	-37	NA	34221953	34267015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72549_52	chr8	+	1538	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	93	3	93	-3	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	5118	False	NA	6	True	AATAAA	-10	NA	34221953	34267189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72551_167	chr8	+	1356	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	29	181	29	-181	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTTGTCTCTTAC	5263	False	NA	36	True	AATAAA	-33	NA	34222098	34267011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72552_125	chr8	+	1537	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	26	3	26	-3	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	5260	False	NA	6	True	AATAAA	-10	NA	34222095	34267189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72554_8	chr8	+	1603	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-40	3	-40	-3	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	5194	False	NA	6	True	AATAAA	-10	NA	34222029	34267189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72555_10	chr8	+	1430	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-44	180	-44	-180	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTTTGTCTCTTACT	5190	False	NA	37	True	AATAAA	-34	NA	34222025	34267012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
Isoform_72558_138	chr8	+	1873	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	25	-1	12	1	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTTCGTGTGTGGTT	NA	False	NA	34	True	AATAAA	-41	NA	34621741	34638000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
Isoform_72560_6	chr8	+	486	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	-59	-9	-59	9	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTTTTGTTTGATTT	NA	False	NA	NA	False	ATTAAA	-32	NA	34683953	34693308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
Isoform_72561_10	chr8	+	2703	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	38	-1	38	1	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCCTCCTAAAAGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	35274488	35287049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
Isoform_72562_4	chr8	+	1969	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	-6	777	-6	-777	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCCTGGCAAATGTGCG	NA	False	NA	NA	False	ATTAAA	-34	NA	35274444	35286271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
Isoform_72563_4	chr8	+	4231	4	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATGAAAACT	NA	False	NA	NA	False	NA	NA	NA	35842817	35855281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_35842960_35851137_35854274_35854304_35855170_35855193
Isoform_72564_3	chr8	+	4204	4	NNC	ENSMUSG00000046794.10	novel	4386	3	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.2565175405668	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATGAAAACT	NA	False	NA	NA	False	NA	NA	NA	35843790	35855281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_35843908_35851137_35854274_35854304_35855170_35855195
Isoform_72565_8	chr8	+	3939	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	44	2425	44	4	multi-exon	FALSE	canonical	1	3	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36054995	36144178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_36058513_36131821_36131949_36143883
Isoform_72566_6	chr8	+	2127	2	ISM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	44636	8	44603	-8	3prime_fragment	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTAATTTGTTTT	NA	False	NA	2	True	AATAAA	-8	NA	36606617	36614933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_36607267_36613455
Isoform_72567_3	chr8	+	1018	4	ISM	ENSMUSG00000039620.18	ENSMUST00000135373.8	2573	7	121	14263	95	-12898	5prime_fragment	FALSE	canonical	2	3	junction_2	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTACTTTGTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	36924822	36965847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480
Isoform_72568_3	chr8	+	2464	6	NIC	ENSMUSG00000039620.18	novel	2573	7	NA	NA	48	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.6	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACTTAGACCTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	36924775	36980163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480_36965636_36972705_36972880_36978726
Isoform_72570_10	chr8	+	1642	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	71	1034	6	178	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTGTTATTCT	NA	False	NA	16	True	TATAAA	-16	NA	39473069	39618333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_72571_17	chr8	+	1550	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	-16	1213	-16	-1	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTTTTAGAATTGTG	NA	False	NA	28	True	AATAAA	-18	NA	39472982	39618154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_72572_9	chr8	+	1713	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	0	1034	0	178	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTGTTATTCT	NA	False	NA	16	True	TATAAA	-16	NA	39472998	39618333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_72573_3	chr8	+	1442	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	47.9785108147387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCATGTTTTAGAATTG	NA	False	NA	26	True	AATAAA	-16	NA	39472998	39618152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39617866
Isoform_72575_3	chr8	+	799	7	ISM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	569	27788	569	-18720	5prime_fragment	FALSE	canonical	1	3	junction_2	1.46249406456535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAGAGAGAA	8831	False	NA	NA	False	NA	NA	NA	40761067	40809915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896
Isoform_72576_16	chr8	+	3420	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-38	-1	-38	1	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTCTCCATCCAGTTA	1182	False	NA	3	True	AATAAA	-27	NA	40876817	40938767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
Isoform_7258_28	chr11	-	3287	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	-26	1431	-26	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8981	False	NA	-7	True	NA	NA	NA	102209948	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_72581_13	chr8	+	1789	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	1	4212	1	2	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGCTAATTTTTAATA	NA	False	NA	15	True	ATTAAA	-15	NA	40964824	40999586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
Isoform_72586_3	chr8	+	2522	14	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-28	52213	-2	4785	5prime_fragment	FALSE	canonical	3	93	junction_5	26.7203355398271	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAACAAGGTATGA	NA	False	NA	NA	False	AATAAA	-16	NA	41692786	41732916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787
Isoform_7259_111	chr11	-	3126	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	135	1431	135	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9142	False	NA	-7	True	NA	NA	NA	102209787	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_72590_6	chr8	+	1602	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	193.213895398338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633573	43646920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_72591_64	chr8	+	1558	9	FSM	ENSMUSG00000091490.4	ENSMUST00000210136.2	1552	9	-7	1	-7	-1	multi-exon	FALSE	canonical	3	91	junction_2	178.11092049619	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGCTCTCTGCATG	NA	False	NA	20	True	AATAAA	-11	NA	43633570	43646917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_72592_15	chr8	+	1220	3	ISM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-6	9264	-6	-2763	5prime_fragment	FALSE	canonical	3	424	junction_1	9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	43633571	43637637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_43633650_43636158_43636403_43636739
Isoform_72595_9	chr8	+	2486	4	ISM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-7	6519	-7	-18	5prime_fragment	FALSE	canonical	3	424	junction_1	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	43633570	43640382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315
Isoform_72597_267	chr8	+	1542	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-4	-19	-4	2	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43633573	43646920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_72598_14	chr8	+	1612	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	-76	-17	-76	0	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633501	43646918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
Isoform_7260_61	chr11	-	3237	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	24	1431	24	2	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9031	False	NA	-7	True	NA	NA	NA	102209898	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_72601_8	chr8	+	1629	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	8	3	2	-3	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTAGTCATGTAAA	8868	False	NA	101	True	AGTAAA	-16	NA	46428572	46449992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_72602_42	chr8	+	1547	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	93	0	5	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGATTTAAAAAGTAGT	8860	False	NA	11	True	AATAAA	-24	NA	46428564	46449902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_72603_3	chr8	+	1041	9	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	65.648210181238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8860	False	NA	3	True	AATAAA	-16	NA	46428564	46449894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
Isoform_72604_3	chr8	+	4614	5	NIC	ENSMUSG00000031631.16	novel	4521	4	NA	NA	29	-16	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATTTAAGAAGAACCAA	NA	False	NA	-2	True	AAGAAA	-3	NA	46604836	46648607	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_46604951_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_72605_3	chr8	+	4699	6	NIC	ENSMUSG00000031631.16	novel	4619	5	NA	NA	0	-10	intron_retention	FALSE	canonical	3	9	junction_1	20.9990475974507	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAGAACCAAGTTTTG	NA	False	NA	4	True	AATAAA	-5	NA	46616728	46648613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_46616787_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
Isoform_72610_180	chr8	+	3851	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	3	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	91.7312944718842	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTCTTTCAAGTGCC	2209	False	NA	15	True	AATAAA	-24	NA	46924076	46989086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
Isoform_72624_4	chr8	+	1643	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-1	1368	-1	261	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAATGATCCTGGTTA	NA	False	NA	11	True	AATAAA	-27	NA	47005088	47031674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_72625_4	chr8	+	1535	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	1	259	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATAGAATGATCCTGGT	NA	False	NA	9	True	AATAAA	-25	NA	47005073	47031672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_72626_10	chr8	+	954	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	31	12	0	-12	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTAGAATGACTCCT	NA	False	NA	9	True	NA	NA	NA	47005103	47016022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
Isoform_72628_14	chr8	+	2468	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	41	422	0	-422	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	47005103	47032620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_72629_74	chr8	+	1520	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	41	1370	0	259	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATAGAATGATCCTGGT	NA	False	NA	9	True	AATAAA	-25	NA	47005103	47031672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
Isoform_7263_25	chr11	-	3325	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	106	-495	106	2	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8467	False	NA	-7	True	NA	NA	NA	102210462	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_72634_28	chr8	+	2448	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	38	-966	-9	-6	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070467	47092718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_72635_18	chr8	+	2509	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	-23	-966	-23	-6	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070406	47092718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_72637_4	chr8	+	2926	3	ISM	ENSMUSG00000031628.10	ENSMUST00000209668.2	1173	4	-3	6	-3	-6	intron_retention	FALSE	canonical	3	221	junction_1	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47070438	47088111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_47070537_47082768_47082837_47085351
Isoform_72639_102	chr8	+	2479	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	116	6	0	-6	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070441	47092718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_7264_96	chr11	-	3112	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	317	-493	317	0	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8678	False	NA	-9	True	NA	NA	NA	102210251	102196818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_72640_116	chr8	+	2451	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	144	6	-7	-6	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCAGTGTATTTGAG	NA	False	NA	15	True	CATAAA	-11	NA	47070469	47092718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
Isoform_72646_49	chr8	+	2945	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-17	10	intron_retention	FALSE	canonical	0	0	junction_6	72.1795600491503	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTGTTTCAAATCAC	NA	False	NA	17	True	AATAAA	-27	NA	47986681	48005870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
Isoform_72656_130	chr8	+	2064	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	31	1	-24	1	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563023	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72657_209	chr8	+	1883	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	212	1	5	1	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563204	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72658_57	chr8	+	2093	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	0	3	0	-1	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGTGTTTGCTTTTAT	NA	False	NA	7	True	ATTAAA	-13	NA	48562992	48594697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72661_6	chr8	+	2097	6	FSM	ENSMUSG00000031562.17	ENSMUST00000033966.14	2072	6	-24	-1	-24	1	multi-exon	FALSE	canonical	1	3	junction_1	152.941034389074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563023	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_48563317_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72662_21	chr8	+	2363	6	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48562992	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72664_34	chr8	+	1893	7	NNC	ENSMUSG00000031562.17	novel	1126	5	NA	NA	193	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	167.429587190158	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563438	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377_48594014_48594037
Isoform_72665_51	chr8	+	2121	6	NIC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48563234	48594699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
Isoform_72667_13	chr8	+	2176	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	80	42640	80	-42640	5prime_fragment	FALSE	canonical	3	54	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTTTCTCGTGAGTGA	NA	False	NA	22	True	NA	NA	NA	52809725	52813734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_52809842_52811674
Isoform_72668_9	chr8	+	2253	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42643	0	-42643	5prime_fragment	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCGTTTCTCGTGAG	NA	False	NA	19	True	NA	NA	NA	52809645	52813731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_52809842_52811674
Isoform_72671_5	chr8	+	1170	9	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-1	-2	combination_of_known_splicesites	TRUE	canonical	3	23	junction_6	114.178314490975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTTGTCTACTTCC	NA	False	NA	20	True	AATAAA	-14	NA	53964831	53976454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
Isoform_72672_85	chr8	+	1207	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	58	-84	-13	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964819	53976457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
Isoform_72673_73	chr8	+	1274	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-9	-84	-9	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964752	53976457	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
Isoform_72674_25	chr8	+	2197	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-394	646	-394	-646	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGAAGTTCAGTCTTT	627	False	NA	NA	False	AATAAA	-18	NA	54530246	54639485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
Isoform_72682_6	chr8	+	1684	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGCCTATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56747619	56774079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
Isoform_72683_8	chr8	+	1995	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	26	1550	7	-4	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCAGTGTTAACTATT	NA	False	NA	NA	False	AATAAA	-44	NA	57004150	57045424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
Isoform_72685_15	chr8	+	1662	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	28	1881	9	-335	multi-exon	FALSE	canonical	3	53	junction_4	8.56504524214554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGTTTGGAAATTTAT	NA	False	NA	NA	False	ACTAAA	-19	NA	57004152	57045093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
Isoform_72686_3	chr8	+	454	3	FSM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	18	2146	18	0	multi-exon	FALSE	canonical	3	58	junction_1	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCCTGCTTCTTTCAA	NA	False	NA	9	True	NA	NA	NA	57941105	57959765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_57941228_57943373_57943502_57959561
Isoform_72687_3	chr8	+	724	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	-7	1385	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	50.4799189997589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57941080	57963296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_57941228_57943373_57943502_57959561_57959836_57963121
Isoform_7269_55	chr11	-	3129	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	3	67	3	2	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9140	False	NA	-7	True	NA	NA	NA	102207527	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_72696_1603	chr8	+	1098	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	26	1504	26	1286	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964966	57967529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_72701_152	chr8	+	1178	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-63	1513	-63	1277	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCATTGTGTTTGTA	NA	False	NA	1	True	AATAAA	-12	NA	57964877	57967520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_72709_439	chr8	+	1089	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	31	1286	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964971	57967529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_72713_49	chr8	+	1180	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-63	1283	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTGTTTGTATTAATT	NA	False	NA	7	True	AATAAA	-18	NA	57964877	57967526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
Isoform_7273_48	chr11	-	3369	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107117.9	3258	20	-180	69	-180	0	multi-exon	FALSE	canonical	3	90	junction_19	213.309601634771	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9960	False	NA	-9	True	NA	NA	NA	102208877	102196818	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
Isoform_72731_10	chr8	+	1893	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-5	919	1	1	5prime_fragment	FALSE	canonical	3	724	junction_4	83.6827673751027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTACATGAG	NA	False	NA	NA	False	CATAAA	-24	NA	61343479	61359695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
Isoform_72732_247	chr8	+	1191	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343484	61360614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_72736_8	chr8	+	1000	7	FSM	ENSMUSG00000038005.16	ENSMUST00000149267.8	1000	7	6	-6	0	-1	multi-exon	FALSE	canonical	3	27	junction_2	318.3514829032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343484	61360613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_61343571_61346734_61346895_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_72737_9	chr8	+	796	5	NIC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	382.667610335654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343429	61360613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61358755_61360370
Isoform_72738_16	chr8	+	590	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	388.477655585091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343484	61360613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_61343571_61357033_61357122_61358581_61358755_61360370
Isoform_72743_6	chr8	+	2330	20	ISM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	8	57796	3	-15905	5prime_fragment	FALSE	canonical	3	31	junction_16	11.6898990420015	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAGGAAGCTTAT	NA	False	NA	NA	False	ACTAAA	-15	NA	61446236	61526584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538
Isoform_72744_3	chr8	+	2478	5	ISM	ENSMUSG00000031642.10	ENSMUST00000209611.2	4416	11	-60	35786	-60	-13733	5prime_fragment	FALSE	canonical	3	51	junction_3	6.25999201277446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	61677217	61803889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433
Isoform_72745_3	chr8	+	2424	10	ISM	ENSMUSG00000031642.10	ENSMUST00000209611.2	4416	11	-75	12276	-75	9777	5prime_fragment	FALSE	canonical	3	41	junction_9	8.07067546548217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGAGCCCCTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	61677202	61827399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042
Isoform_72746_5	chr8	+	2362	10	ISM	ENSMUSG00000031642.10	ENSMUST00000209611.2	4416	11	-11	12274	-11	9779	5prime_fragment	FALSE	canonical	3	41	junction_9	8.07067546548217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGCCCCTCCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	61677266	61827401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042
Isoform_72747_3	chr8	+	2491	5	NNC	ENSMUSG00000031642.10	novel	4416	11	NA	NA	-75	-13733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.810608284192	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	61677202	61803889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_61677381_61678867_61679353_61782252_61782529_61782956_61783053_61802433
Isoform_72748_3	chr8	+	5145	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	334	0	-38	0	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCCTTTTTTTTTTA	NA	False	NA	7	True	ATTAAA	-18	NA	61677239	61849105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
Isoform_72749_28	chr8	+	1089	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	8	3212	7	93	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGCTAAGAGTAT	2574	False	NA	14	True	ATTAAA	-14	NA	61940775	61956516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
Isoform_72750_14	chr8	+	2390	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	39	-1307	5	1307	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGAAGTATTCCTATG	NA	False	NA	NA	False	ATTAAA	-18	NA	65399875	65422992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_72751_311	chr8	+	1087	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	34	1	0	1	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399870	65421684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
Isoform_72752_4	chr8	+	978	5	FSM	ENSMUSG00000025521.16	ENSMUST00000079896.9	916	5	-60	-2	9	0	multi-exon	FALSE	canonical	3	13	junction_3	253.637536654179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	False	NA	25	True	TATAAA	-17	NA	65399845	65421685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65418190_65418294_65421362
Isoform_72753_3	chr8	+	2750	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-21	2756	-18	1803	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTGTTTTTCATGAAA	NA	False	NA	NA	False	CATAAA	-14	NA	66964389	66968231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_66966353_66967444
Isoform_72754_3	chr8	+	2810	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-16	2691	-13	1868	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTGGTAGCTTGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	66964394	66968296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_66966353_66967444
Isoform_72755_26	chr8	+	2568	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	153	-3	153	-2	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	20	True	NA	NA	NA	68729371	68800349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
Isoform_72756_10	chr8	+	2777	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	-56	-3	-56	-2	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	20	True	NA	NA	NA	68729162	68800349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
Isoform_72762_14	chr8	+	3369	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	21	811	-6	-809	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATTGTCCATATTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	69246601	69281251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
Isoform_72763_17	chr8	+	2526	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	42	1633	-3	276	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATGTCTTCCATGACC	NA	False	NA	NA	False	ATTAAA	-35	NA	69246622	69280429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
Isoform_72766_4	chr8	+	2467	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	89	1559	25	-1559	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGGAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	69333231	69358027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
Isoform_72768_21	chr8	+	2410	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	146	1559	-20	-1559	multi-exon	FALSE	canonical	3	87	junction_5	14.4871164560059	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGGAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	69333288	69358027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
Isoform_72773_1448	chr8	+	2702	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	123	0	1	0	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69541420	69566363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_72774_31	chr8	+	2825	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	1	-1	1	1	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATGACTCTGTGTTTT	NA	False	NA	19	True	AATAAA	-23	NA	69541298	69566364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_72775_117	chr8	+	2743	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	82	0	-40	0	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69541379	69566363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
Isoform_72779_4	chr8	+	555	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	1	2445	1	-3	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCATAAAAGAACACACA	7201	False	NA	NA	False	NA	NA	NA	69661690	69680743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
Isoform_7278_17	chr11	-	3075	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	75	1430	75	2	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9082	False	NA	-7	True	NA	NA	NA	102209847	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_72780_4	chr8	+	2978	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	30	-7	20	7	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTCCTGTAAATATTT	7230	False	NA	34	True	AATAAA	-25	NA	69661719	69683195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
Isoform_72781_49	chr8	+	3837	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	74	4	-13	0	multi-exon	TRUE	canonical	3	203	junction_10	47.3625337160081	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9238	False	NA	NA	False	AATAAA	-19	NA	70243886	70260395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_72782_3	chr8	+	3836	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-10	1	intron_retention	FALSE	canonical	3	87	junction_12	60.2107410129898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGCTGCCACTTATAT	9241	False	NA	NA	False	AATAAA	-21	NA	70243889	70260397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
Isoform_72785_3	chr8	+	961	6	FSM	ENSMUSG00000031860.18	ENSMUST00000134777.10	931	6	-30	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	11.2178429299041	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2242	False	NA	5	True	ATTAAA	-18	NA	70285309	70324942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70285502_70311729_70311804_70319117_70319254_70322678_70322833_70323227_70323335_70324644
Isoform_72786_3	chr8	+	814	5	NIC	ENSMUSG00000031860.18	novel	931	6	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	14.9059551857638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAGTGTTTTCAATA	2232	False	NA	2	True	ATTAAA	-15	NA	70285299	70324939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70285502_70311729_70311804_70319117_70319254_70323227_70323335_70324644
Isoform_72787_10	chr8	+	670	4	NIC	ENSMUSG00000031860.18	novel	823	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	13.4246870437348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2243	False	NA	5	True	ATTAAA	-18	NA	70285310	70324942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70285502_70311729_70311804_70323227_70323335_70324644
Isoform_72788_6	chr8	+	2236	4	FSM	ENSMUSG00000011306.8	ENSMUST00000213035.2	2239	4	-23	26	-8	-26	multi-exon	FALSE	canonical	3	476	junction_3	13.8884444373331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCCAAAATCAGAAATTA	2370	False	NA	NA	False	NA	NA	NA	70495675	70510943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035
Isoform_7279_31	chr11	-	3014	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	136	1430	136	2	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9143	False	NA	-7	True	NA	NA	NA	102209786	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
Isoform_72791_92	chr8	+	2315	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	-26	392	-26	-392	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	2131	False	NA	11	True	ATTAAA	-16	NA	70495436	70524605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_72792_303	chr8	+	2076	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	213	392	-8	-392	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	2370	False	NA	11	True	ATTAAA	-16	NA	70495675	70524605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_72793_23	chr8	+	2468	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	213	0	-8	0	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	2370	False	NA	NA	False	GATAAA	-14	NA	70495675	70524997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
Isoform_72795_3	chr8	+	546	2	ISM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	-2	1554	-2	-1545	5prime_fragment	FALSE	canonical	3	606	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACACGCCTTTAATC	445	False	NA	NA	False	NA	NA	NA	70583980	70584844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70584250_70584567
Isoform_72796_41	chr8	+	763	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	7	-14	1	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8828	False	NA	25	True	AATAAA	-25	NA	70592363	70598199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
Isoform_72797_6	chr8	+	1036	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-266	-14	-58	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8555	False	NA	25	True	AATAAA	-25	NA	70592090	70598199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
Isoform_72798_8	chr8	+	1969	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	216	-1375	2	1312	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACAGTGGTCTGTGGTGC	8829	False	NA	25	True	ATTAAA	-35	NA	70592364	70601281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
Isoform_72799_23	chr8	+	597	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	216	-3	2	-2	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTCTCTTTCCATGCTG	8829	False	NA	20	True	AATACA	-14	NA	70592364	70599909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
Isoform_72800_3	chr8	+	1705	13	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_5	72.9206189405073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8826	False	NA	5	True	NA	NA	NA	70592361	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_72801_94	chr8	+	1329	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	113	junction_6	45.467021015237	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8572	False	NA	5	True	NA	NA	NA	70605410	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_72802_19	chr8	+	1368	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-56	0	-56	0	multi-exon	FALSE	canonical	3	113	junction_6	45.467021015237	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8533	False	NA	5	True	NA	NA	NA	70605371	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_72803_83	chr8	+	1359	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8572	False	NA	5	True	NA	NA	NA	70605410	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_72804_19	chr8	+	1393	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-51	0	-51	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8538	False	NA	5	True	NA	NA	NA	70605376	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_72805_3	chr8	+	2235	12	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	70.1855863331327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCAGTGTGGTCTGGCC	5872	False	NA	23	True	AATAAA	-33	NA	70625060	70635516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70625091_70626952_70627057_70629456_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_72806_68	chr8	+	2174	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	14	830	0	1	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCTTACCATGGTGC	5880	False	NA	8	True	AATAAA	-18	NA	70625068	70635501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_72807_18	chr8	+	2084	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	-3	-1	0	1	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCTTACCATGGTGC	5866	False	NA	8	True	AATAAA	-18	NA	70625054	70635501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_72808_3	chr8	+	2896	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	-816	0	-1	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTTACTGTATTCCT	5869	False	NA	NA	False	AATAAA	-29	NA	70625057	70636316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_72809_81	chr8	+	2171	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	812	-1	2	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTGGTCTGGCCCAG	7763	False	NA	26	True	AATAAA	-36	NA	70626951	70635519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_7281_23	chr11	-	3020	20	NIC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	300	2	combination_of_known_junctions	FALSE	canonical	3	106	junction_19	210.872137020862	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	8661	False	NA	-7	True	NA	NA	NA	102210268	102196816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
Isoform_72810_7	chr8	+	2966	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	17	-1	-3	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATGGTTACTGTATTC	7763	False	NA	NA	False	AATAAA	-27	NA	70626951	70636314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
Isoform_72812_5	chr8	+	2633	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-418	10215	-21	1645	5prime_fragment	FALSE	canonical	3	101	junction_1	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1071	False	NA	NA	False	NA	NA	NA	70686854	70697198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70687303_70689317_70689445_70695140
Isoform_72813_13	chr8	+	2283	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-66	10213	-60	1647	5prime_fragment	FALSE	canonical	3	101	junction_1	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1423	False	NA	NA	False	NA	NA	NA	70687206	70697200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70687303_70689317_70689445_70695140
Isoform_72814_8	chr8	+	3555	6	FSM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-36	-2	-30	2	multi-exon	FALSE	canonical	3	101	junction_1	8.51821577561874	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTATGTACACAGCGTT	1453	False	NA	NA	False	AATAAA	-20	NA	70687236	70707415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228
Isoform_72815_3	chr8	+	4014	7	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	-31	2771	-31	1	5prime_fragment	FALSE	canonical	3	99	junction_6	10.077477638554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGAGCTCT	1061	False	NA	NA	False	NA	NA	NA	70686844	70710921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779
Isoform_72816_13	chr8	+	3629	7	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	354	2771	-37	1	5prime_fragment	FALSE	canonical	3	99	junction_6	10.077477638554	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGAGCTCT	1446	False	NA	NA	False	NA	NA	NA	70687229	70710921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779
Isoform_72818_24	chr8	+	3603	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1457	False	NA	26	True	AATAAA	-17	NA	70687240	70715755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_72819_8	chr8	+	3982	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1077	False	NA	25	True	AATAAA	-16	NA	70686860	70715754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
Isoform_72820_6	chr8	+	4230	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	377	2	-14	-2	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1469	False	NA	24	True	AATAAA	-15	NA	70687252	70715753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
Isoform_72822_9	chr8	+	728	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	163	-11	-9	11	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTTTGGTGTAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	70735639	70739191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
Isoform_72823_9	chr8	+	2166	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-16	1666	-16	-774	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70735632	70745345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
Isoform_72824_14	chr8	+	1700	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	36	2080	1	543	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATGCTATTAAGCATTC	NA	False	NA	6	True	ATTAAA	-15	NA	70735684	70744931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
Isoform_72826_48	chr8	+	2443	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-8	10	-8	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735640	70747001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_72827_280	chr8	+	2403	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	32	10	-3	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735680	70747001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_72828_6	chr8	+	2571	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-136	10	36	-2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735512	70747001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_72832_8	chr8	+	2595	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	142	junction_8	39.3660704160321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTGAGATCTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	70735642	70747001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
Isoform_72833_4	chr8	+	2291	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-17	-6	intron_retention	FALSE	canonical	1	2	junction_2	60.6206183983634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGAAGTGAGATCTG	NA	False	NA	NA	False	AATAAA	-11	NA	70735631	70746997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70735751_70737883_70737966_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
Isoform_72837_1827	chr8	+	1040	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	260	0	5	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	712	False	NA	26	True	AATAAA	-15	NA	70755427	70765640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_72838_153	chr8	+	1216	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	92	-8	92	5	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACCCACCAGGCGCTCA	544	False	NA	34	True	AATAAA	-23	NA	70755259	70765648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_72839_59	chr8	+	1262	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	40	-2	40	-1	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATACCCACCAGG	492	False	NA	28	True	AATAAA	-17	NA	70755207	70765642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_72845_26	chr8	+	1813	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1283	junction_8	36.3180395946698	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCTGCCTGATACCCACC	701	False	NA	25	True	AATAAA	-14	NA	70755416	70765639	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
Isoform_72849_59	chr8	+	2692	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	6	13	6	-13	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAGTTCCATTGCGT	2376	False	NA	NA	False	AAAAAG	-20	NA	70768442	70784224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
Isoform_72850_3	chr8	+	591	3	FSM	ENSMUSG00000007888.16	ENSMUST00000127983.2	544	3	0	-47	0	-4	multi-exon	FALSE	canonical	1	2	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-23	NA	70953782	70956727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70953929_70955954_70956143_70956470
Isoform_72851_124	chr8	+	1942	8	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	8	0	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	458.365107123755	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980404	70987976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
Isoform_72852_610	chr8	+	1702	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	-3	-1	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980393	70987977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72854_30	chr8	+	2537	8	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	479.613790205309	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980393	70987978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72856_39	chr8	+	1952	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	20	0	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	536.662817411302	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980393	70987978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132
Isoform_72858_149	chr8	+	1697	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	528.343741682439	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72864_18	chr8	+	1890	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	158	3	-5	-2	intron_retention	FALSE	canonical	3	550	junction_1	284.398039546617	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGCTTTCTAGGCCTC	NA	False	NA	23	True	AATAAA	-15	NA	70980653	70987974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
Isoform_72866_40	chr8	+	1865	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	-68	2	16	-1	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTTCTAGGCCTCT	NA	False	NA	24	True	AATAAA	-16	NA	70980427	70987975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72867_56	chr8	+	1635	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	164	0	1	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980659	70987977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_7287_22	chr11	-	3237	20	NNC	ENSMUSG00000020923.18	novel	3286	20	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	192.377600760167	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9142	False	NA	-6	True	NA	NA	NA	102207525	102196815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199142_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
Isoform_72870_15	chr8	+	1631	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_4	413.857897562678	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980659	70987976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72872_17	chr8	+	2843	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	424.114076635049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980681	70987976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
Isoform_72879_5	chr8	+	1508	3	ISM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	51075	1	51075	-1	3prime_fragment	FALSE	canonical	3	124	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGTGGTTTGAGTA	NA	False	NA	7	True	AATAAA	-15	NA	71043412	71045507	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71043516_71044019_71044065_71044147
Isoform_72880_132	chr8	+	1813	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	24	-1	15	1	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047154	71049939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_72881_20	chr8	+	1950	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-114	0	-6	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047016	71049938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_72882_44	chr8	+	1857	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-20	-1	-12	1	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047110	71049939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_72883_12	chr8	+	1935	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	-18	-1	-1	1	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047121	71049939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
Isoform_72887_1934	chr8	+	788	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	131	6	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGCCAGCTGTTCTTC	NA	False	NA	14	True	AATAAA	-14	NA	71126028	71131396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
Isoform_72888_40	chr8	+	917	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	4	4	4	2	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCAGCTGTTCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	71125901	71131398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
Isoform_72898_6	chr8	+	1167	4	FSM	ENSMUSG00000095026.3	ENSMUST00000179347.3	1149	4	-20	2	-20	-2	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGTAAAGTCTCACGA	NA	False	NA	NA	False	NA	NA	NA	71171171	71175279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71171282_71173068_71173378_71174425_71174587_71174692
Isoform_72899_11	chr8	+	840	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	-2	4	-2	-2	multi-exon	FALSE	canonical	3	28	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGTAAAGTCTCACGA	NA	False	NA	NA	False	NA	NA	NA	71171189	71175279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71171282_71174425_71174587_71174692
Isoform_72900_11	chr8	+	1362	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	-26	27	6	-27	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGGCCCAGCCCCTG	NA	False	NA	19	True	AATAAA	-19	NA	71207333	71211254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
Isoform_72901_4	chr8	+	1342	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	25	75	1	-33	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCTGCTGGCCCAG	NA	False	NA	13	True	AATAAA	-13	NA	71207352	71211248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
Isoform_72902_87	chr8	+	3266	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	50	-2	0	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358625	71370173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
Isoform_72903_3	chr8	+	2935	14	ISM	ENSMUSG00000004677.18	ENSMUST00000212935.2	6316	40	9	24976	9	-4063	5prime_fragment	TRUE	canonical	0	0	junction_1	31.1903869274876	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71725366	71787589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956
Isoform_72904_158	chr8	+	982	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	-11	2	-11	1	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819574	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_72905_18	chr8	+	1065	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110053.9	1064	9	0	-1	0	1	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819491	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_72909_471	chr8	+	844	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	8	2	8	1	multi-exon	FALSE	canonical	3	608	junction_1	107.997165495683	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819868	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_72917_289	chr8	+	749	7	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	377	2	-47	1	3prime_fragment	FALSE	canonical	3	658	junction_5	82.6975748670352	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820237	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_72918_17	chr8	+	820	7	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	306	2	-118	1	3prime_fragment	FALSE	canonical	3	658	junction_5	82.6975748670352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820166	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
Isoform_72919_12	chr8	+	1003	6	NIC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-47	1	intron_retention	FALSE	canonical	3	802	junction_4	38.206805676476	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71820237	71822374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821948_71822170
Isoform_72925_25	chr8	+	1131	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-41	521	0	213	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTAAAAGCATCCCTTC	NA	False	NA	23	True	AGTAAA	-28	NA	71823941	71825812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
Isoform_72926_8	chr8	+	956	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	0	1223	0	204	multi-exon	FALSE	canonical	3	32	junction_1	15.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGCAGCTACCTAAAAG	NA	False	NA	14	True	AGTAAA	-19	NA	71823941	71825803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71824630_71825392_71825447_71825589
Isoform_72929_12	chr8	+	1471	3	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	4	5260	4	-597	5prime_fragment	FALSE	canonical	3	350	junction_2	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71849508	71852003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71849665_71850322_71850670_71851035
Isoform_72930_414	chr8	+	1358	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	6	69	6	-69	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849510	71857194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
Isoform_72931_29	chr8	+	1419	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	6	8	6	-8	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAGTGGTGTATGG	NA	False	NA	81	True	AAAACA	-8	NA	71849510	71857255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
Isoform_72932_3	chr8	+	1777	3	ISM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	0	1250	0	-931	intron_retention	FALSE	canonical	3	99	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	71858665	71860870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71858742_71858830_71858984_71859322
Isoform_72933_6	chr8	+	2096	10	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	40.8858694537325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTCTCCATGTCTC	NA	False	NA	20	True	NA	NA	NA	71858665	71862550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870_71862197_71862226
Isoform_72934_5	chr8	+	2048	10	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	42.6131029521423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTCTCCATGTCTC	NA	False	NA	20	True	NA	NA	NA	71858653	71862550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859916_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870_71862197_71862226
Isoform_72935_6	chr8	+	1673	4	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-11	1642	-5	-931	5prime_fragment	FALSE	canonical	3	99	junction_2	7.25718035235908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	71858648	71860870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514
Isoform_72936_4	chr8	+	2454	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-6	-38	0	2	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTCTCCATGTCTC	NA	False	NA	20	True	NA	NA	NA	71858653	71862550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
Isoform_72937_4	chr8	+	1873	2	NIC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	-1	-931	intron_retention	FALSE	canonical	3	99	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	71858658	71860870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71858984_71859322
Isoform_72938_321	chr8	+	615	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	-9	1	-9	-1	multi-exon	FALSE	canonical	3	904	junction_1	0	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTACGTATGTATTAAC	8911	False	NA	17	True	AATAAA	-17	NA	71917593	71918390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71917712_71917893
Isoform_72942_21	chr8	+	1944	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	-13	2	-13	-2	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATCCTGTGTATTTTTC	NA	False	NA	11	True	NA	NA	NA	71921829	71928740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
Isoform_72950_5	chr8	+	2283	9	FSM	ENSMUSG00000007610.16	ENSMUST00000127741.2	2392	9	-23	132	0	-132	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTGTGTAGT	NA	False	NA	7	True	ATTAAA	-9	NA	71941371	71945912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943298_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_72951_8	chr8	+	1393	8	ISM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	965	0	-965	5prime_fragment	FALSE	canonical	0	0	junction_4	25.2303671905787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCAGCCTCAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71941371	71945079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720
Isoform_72952_132	chr8	+	2053	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	122	0	-122	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAGTAGCATGTGGT	NA	False	NA	17	True	ATTAAA	-19	NA	71941371	71945922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_72953_3	chr8	+	2912	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	-244	132	-244	-132	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTGTGTAGT	NA	False	NA	7	True	ATTAAA	-9	NA	71940502	71945912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_72955_3	chr8	+	2267	8	NIC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	-2	-125	intron_retention	FALSE	canonical	0	0	junction_4	25.6371860024155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGTGTAGTAGCATGT	NA	False	NA	14	True	ATTAAA	-16	NA	71941369	71945919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71944235_71944720_71945000_71945182
Isoform_72956_30	chr8	+	1970	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	7	132	0	-132	multi-exon	TRUE	canonical	0	0	junction_4	25.5774135055258	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTGTGTAGT	NA	False	NA	7	True	ATTAAA	-9	NA	71941371	71945912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
Isoform_72957_4	chr8	+	2726	6	FSM	ENSMUSG00000007610.16	ENSMUST00000124349.8	2830	6	-20	124	2	-124	multi-exon	FALSE	canonical	3	52	junction_2	10.7962956610126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941366	71945920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71944235_71944720_71945000_71945182
Isoform_72958_239	chr8	+	1070	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-8	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995565	72000670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
Isoform_72959_5	chr8	+	1132	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-10	-60	-2	1	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGTGTGCGTGCGT	NA	False	NA	71	True	NA	NA	NA	71995563	72000730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
Isoform_72960_73	chr8	+	2752	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022324	72039352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72961_23	chr8	+	3347	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72022323	72039946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72963_3	chr8	+	2857	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-106	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	51.2891449420722	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72022216	72039350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037190_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72964_3	chr8	+	2819	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	5	-1	intron_retention	FALSE	canonical	1	37	junction_10	41.6609693074509	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022327	72039351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037651_72037989_72038137_72038545
Isoform_72965_12	chr8	+	2601	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	12	junction_1	50.3216102962725	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022306	72039351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72966_9	chr8	+	3180	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	12	junction_1	50.3216102962725	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022323	72039947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72969_20	chr8	+	2718	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1666	1	-62	-1	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72023236	72039351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72970_7	chr8	+	3335	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1645	-595	-83	1	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72023215	72039947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_72974_697	chr8	+	898	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-6	1	-6	-1	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTTTCTGTGGTTCT	NA	False	NA	14	True	ATTAAA	-14	NA	72044813	72048912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
Isoform_72976_13	chr8	+	1180	5	FSM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	-121	3	-6	-3	multi-exon	FALSE	canonical	3	15	junction_1	254.639941878724	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTGTTTCTGTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	72044813	72048910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72048700
Isoform_72984_491	chr8	+	3049	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	155	3	-18	2	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTTGGGTTTGGTGC	NA	False	NA	27	True	ATTAAA	-19	NA	72063796	72077552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
Isoform_72993_30	chr8	+	3820	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	2	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTTGGGTTTGGTGC	NA	False	NA	27	True	ATTAAA	-19	NA	72063831	72077552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
Isoform_72996_25	chr8	+	3863	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-27	1	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063787	72077551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
Isoform_730_8	chr10	-	2007	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-17	-1045	4	2	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGTTTGAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	29238039	29222169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
Isoform_73002_6	chr8	+	1456	7	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-34	88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	88.2187936641369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACTACACCCAGCTACT	NA	False	NA	NA	False	NA	NA	NA	72129161	72133038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132786_72132806
Isoform_73003_75	chr8	+	3537	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	222	250	-34	-250	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72129161	72140950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_73004_5	chr8	+	3813	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	202	-6	-54	4	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGTTTGTGACTGGA	NA	False	NA	2	True	AATAGA	-1	NA	72129141	72141206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_73005_3	chr8	+	3805	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-47	251	-47	-251	multi-exon	TRUE	canonical	3	153	junction_6	28.4113052926296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72128892	72140949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
Isoform_73006_23	chr8	+	3829	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	190	0	-66	0	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129129	72143219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_73007_25	chr8	+	3759	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	259	1	3	-1	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129198	72143218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
Isoform_73010_10	chr8	+	2908	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	12	0	12	0	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676707	72688473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
Isoform_73011_7	chr8	+	2855	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676699	72688473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72676817_72682045_72682173_72685862
Isoform_73013_11	chr8	+	2701	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	11	-405	0	-2	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGTTTGTAGAGACTC	NA	False	NA	14	True	AATAAA	-16	NA	72704920	72724175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
Isoform_73014_72	chr8	+	2727	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	-14	0	-9	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704900	72724177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
Isoform_73016_37	chr8	+	2651	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	5	-2055	1	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704915	72724177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72719637_72719765_72721742
Isoform_73018_9	chr8	+	2795	4	FSM	ENSMUSG00000052446.18	ENSMUST00000145256.8	504	4	-11	-2280	-7	0	multi-exon	FALSE	canonical	3	61	junction_2	168.256418071413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704902	72724177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72719637_72719835_72719943_72720005_72721742
Isoform_73019_3	chr8	+	2561	3	FSM	ENSMUSG00000052446.18	ENSMUST00000139781.8	416	3	13	-2158	-1	-6	multi-exon	FALSE	canonical	3	50	junction_1	148.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCCAGTTTGTAGAG	NA	False	NA	10	True	AATAAA	-12	NA	72704933	72724171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72719943_72720005_72721742
Isoform_73020_9	chr8	+	2504	2	FSM	ENSMUSG00000052446.18	ENSMUST00000144807.2	701	2	12	-1815	1	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704935	72724177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72705005_72721742
Isoform_73021_7	chr8	+	2859	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	-4	-2157	-4	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707286	72724177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
Isoform_73023_314	chr8	+	2121	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	30	7	1	-5	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889102	72906979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_73025_22	chr8	+	2216	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	-65	7	-65	-5	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889007	72906979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_73028_56	chr8	+	1987	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	52	5	52	-5	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72889703	72906979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
Isoform_73030_24	chr8	+	1861	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	146	2543	-13	-2543	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTAGTTCCACCTG	NA	False	NA	10	True	ATTAAA	-10	NA	72915189	72935205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_73031_214	chr8	+	1782	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	146	2622	-13	-2622	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCTCCCCTGGAGTCT	NA	False	NA	26	True	ATTAAA	-23	NA	72915189	72935126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_73035_8	chr8	+	1939	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	-11	2622	-11	-2622	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCTCCCCTGGAGTCT	NA	False	NA	26	True	ATTAAA	-23	NA	72915032	72935126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
Isoform_73040_4	chr8	+	471	2	ISM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	-30	3146	4	-3146	5prime_fragment	FALSE	canonical	3	987	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTACTTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	72973577	72974128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_72973705_72973784
Isoform_73043_89	chr8	+	1574	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	975	15	13	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACAGATATATGAGAT	NA	False	NA	31	True	AATATA	-27	NA	72973588	72977287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
Isoform_73044_247	chr8	+	1154	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	15	1395	15	-407	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGTGAATGTTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	72973588	72976867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
Isoform_73047_354	chr8	+	2044	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	40	0	12	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993901	73011229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
Isoform_73048_693	chr8	+	2005	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	79	0	1	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993940	73011229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
Isoform_73056_46	chr8	+	2013	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	306	29	-306	intron_retention	FALSE	canonical	3	2987	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072905	73075194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_73072994_73073269
Isoform_73058_3227	chr8	+	1512	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	306	29	-306	multi-exon	FALSE	canonical	3	2955	junction_2	16	3227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072905	73075194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_73059_67	chr8	+	1662	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	-121	306	-121	-306	multi-exon	FALSE	canonical	3	2955	junction_2	16	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072755	73075194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_73060_160	chr8	+	1818	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	0	29	0	multi-exon	FALSE	canonical	3	2955	junction_2	16	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	False	NA	21	True	ATTAAA	-16	NA	73072905	73075500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73072994_73073269_73074087_73074587
Isoform_73078_5	chr8	+	1504	3	ISM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-24	10491	-24	-8501	5prime_fragment	FALSE	canonical	3	59	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAGTAGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	73197751	73203994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_73197834_73198593_73199315_73203293
Isoform_73079_207	chr8	+	2407	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	20	460	20	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197743	73214385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_73080_3	chr8	+	2502	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	20	365	20	-5	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTAGAGGACTCTG	NA	False	NA	101	True	AAAACA	-27	NA	73197743	73214480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_73081_4	chr8	+	2305	8	FSM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-32	100	20	-100	multi-exon	FALSE	canonical	0	0	junction_4	27.5251276665745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197743	73214385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73209059_73209412_73211816_73211913_73212446_73212614_73213872
Isoform_73082_4	chr8	+	2085	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	0	909	0	-909	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTACAGCCCATC	NA	False	NA	NA	False	AATAAA	-14	NA	73246777	73258434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73246895_73256466
Isoform_73083_19	chr8	+	2148	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-28	4	-10	-4	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGCTCTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	73325888	73341122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
Isoform_73085_5	chr8	+	1969	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-53	-1096	-17	-5	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAAGCTCTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	73325881	73341121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
Isoform_73086_5	chr8	+	1016	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	3	5	0	-2	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTAGTTATGTGCA	NA	False	NA	19	True	AATAAA	-16	NA	73449915	73466529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
Isoform_73087_3	chr8	+	4117	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	-1	-1	-1	1	multi-exon	TRUE	canonical	3	31	junction_6	282.896831519815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGGGTCCTTCGTCA	NA	False	NA	27	True	ATTAAA	-18	NA	73449914	73484830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
Isoform_73090_20	chr8	+	3990	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720305	75758606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_73095_11	chr8	+	3877	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	317	-3	-6	3	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTCCAGTCTTAGCTGTC	NA	False	NA	29	True	ATTAAA	-20	NA	75720300	75758603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_73098_16	chr8	+	3886	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTTAGCTGTCTT	NA	False	NA	31	True	ATTAAA	-22	NA	75720304	75758605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_73100_8	chr8	+	2701	7	FSM	ENSMUSG00000034518.15	ENSMUST00000109940.2	2656	7	18	-63	18	-2	multi-exon	FALSE	canonical	3	11	junction_1	40.0489284084689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	30	True	ATTAAA	-21	NA	75742867	75758604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
Isoform_73102_279	chr8	+	2241	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	16	10	-3	-10	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCATGATCTGCTCTG	NA	False	NA	2	True	AATAAA	-15	NA	75760348	75796739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_73103_14	chr8	+	2325	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-76	18	-76	-18	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACCTGTCAGCATGAT	NA	False	NA	-6	True	AATAAA	-7	NA	75760256	75796731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_73106_6	chr8	+	2155	14	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	86.2760808693668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGATCTGCTCTGGCG	NA	False	NA	5	True	AATAAA	-18	NA	75760358	75796742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_75760456_75774620_75774706_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_73108_8	chr8	+	2072	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	88.9817006780358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGATCTGCTCTGGC	NA	False	NA	4	True	AATAAA	-17	NA	75760355	75796741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_75760456_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
Isoform_73112_123	chr8	+	1569	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820249	75827218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
Isoform_73114_3	chr8	+	2444	4	NIC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	108.943410386616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGCATTCATGTCTA	NA	False	NA	12	True	AATAAA	-21	NA	75820248	75827219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_75820401_75822483_75823970_75825393_75825494_75826513
Isoform_73116_754	chr8	+	2614	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-7	-3	0	3	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836196	75854324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_73118_92	chr8	+	2663	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-56	-3	-49	3	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836147	75854324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_73124_1371	chr8	+	2638	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	1	742	1	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836197	75854325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_73126_66	chr8	+	2688	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	-49	742	-49	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836147	75854325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_73133_544	chr8	+	2690	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-28	-9	20	4	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836223	75854325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
Isoform_73146_7	chr8	+	3511	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-749	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.31816613336672	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGATGCTTACTTCC	NA	False	NA	7	True	ATTAAA	-17	NA	75939822	75950737	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_75940707_75945163_75945444_75948346_75949349_75949392
Isoform_73147_154	chr8	+	2769	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	11	1	1	0	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276036	78307966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_73148_4	chr8	+	2735	12	FSM	ENSMUSG00000037134.18	ENSMUST00000210040.2	2688	12	-47	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	44.8630606944737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276035	78307966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_73149_3	chr8	+	2659	11	NIC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	49.1822122316595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTTAAAGTGTATGTA	NA	False	NA	6	True	AATAAA	-11	NA	78276037	78307960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
Isoform_73150_6	chr8	+	1219	3	FSM	ENSMUSG00000037101.17	ENSMUST00000124713.2	673	3	0	-546	0	-6	multi-exon	FALSE	canonical	2	2	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCCAGGTTATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	79117610	79120949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_79118107_79119699_79119767_79120293
Isoform_73151_55	chr8	+	3546	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	50	-1	26	1	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGAAATGTCGTGGC	NA	False	NA	33	True	ATTAAA	-18	NA	79236046	79460633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_73153_48	chr8	+	3604	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-8	-1	8	1	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGAAATGTCGTGGC	NA	False	NA	33	True	ATTAAA	-18	NA	79235988	79460633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_73156_9	chr8	+	1426	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-49	2218	-27	147	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGATGTTTTTGACAAGA	NA	False	NA	NA	False	NA	NA	NA	79235947	79458414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_73157_3	chr8	+	3542	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_4	40.3669419203387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTCTGGAAATGTCGT	NA	False	NA	30	True	ATTAAA	-15	NA	79236008	79460630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_73159_4	chr8	+	3396	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-165	2224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	66.3638455787487	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGAAAAACCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	80366081	80400231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390354_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
Isoform_73160_8	chr8	+	898	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	0	1903	0	75	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATACTATGTGTTTACT	NA	False	NA	26	True	ATTAAA	-32	NA	80438448	80502046	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73161_23	chr8	+	848	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-20	1973	-20	5	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGTCAATCTTTA	NA	False	NA	7	True	AATAAA	-25	NA	80438428	80501976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73162_27	chr8	+	800	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-20	5	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGTCAATCTTTA	NA	False	NA	7	True	AATAAA	-25	NA	80438428	80501976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73163_26	chr8	+	833	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-54	4	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGAAGTCAATCTTT	NA	False	NA	6	True	AATAAA	-24	NA	80438394	80501975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73164_5	chr8	+	927	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-76	76	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACTATGTGTTTACTT	NA	False	NA	27	True	ATTAAA	-33	NA	80438372	80502047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73165_6	chr8	+	871	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-22	74	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATACTATGTGTTTAC	NA	False	NA	25	True	ATTAAA	-31	NA	80438426	80502045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73166_7	chr8	+	907	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	19	4	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGAAGTCAATCTTT	NA	False	NA	6	True	AATAAA	-24	NA	80438498	80501975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73167_4	chr8	+	977	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	19	74	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATACTATGTGTTTAC	NA	False	NA	25	True	ATTAAA	-31	NA	80438498	80502045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73168_20	chr8	+	880	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-1	3712	-1	5	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGTCAATCTTTA	NA	False	NA	7	True	AATAAA	-25	NA	80438478	80501976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73169_4	chr8	+	956	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-4	3639	-4	78	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATGTGTTTACTTTA	NA	False	NA	29	True	ATTAAA	-35	NA	80438475	80502049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
Isoform_73171_4	chr8	+	5751	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-411	-6	97	6	multi-exon	TRUE	canonical	2	4	junction_8	3.27528624703246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTACTTGAGTTTC	NA	False	NA	9	True	AATAAA	-21	NA	83892077	83999569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
Isoform_73172_3	chr8	+	2317	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-26	2	-15	-2	multi-exon	TRUE	canonical	3	23	junction_5	6.81834260787527	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGAGCCAAGAGATT	NA	False	NA	10	True	AATAAA	-16	NA	84116480	84153458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
Isoform_73174_851	chr8	+	557	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	64	2	-23	-2	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCATCTGTGCTACTTC	NA	False	NA	21	True	AATAAA	-21	NA	84293363	84298253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84293560_84297458_84297628_84298061
Isoform_73175_203	chr8	+	2166	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	80	750	80	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334901	84338532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84335172_84336442_84337024_84337217
Isoform_73176_133	chr8	+	2226	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	20	750	20	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334841	84338532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84335172_84336442_84337024_84337217
Isoform_73183_579	chr8	+	1593	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	24	-95	3	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379329	84391418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_73184_14	chr8	+	1665	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-48	-95	-48	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379257	84391418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_73185_12	chr8	+	1760	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-143	-95	-143	95	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379162	84391418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_73186_17	chr8	+	1709	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	2	95	intron_retention	FALSE	canonical	3	964	junction_1	105.526489565417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379307	84391418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_84379367_84387587_84387910_84388583_84389045_84389677_84389791_84390548_84390631_84390746
Isoform_73189_188	chr8	+	1528	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	56	72	-35	1	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGCTCCAGCCCCAT	NA	False	NA	27	True	AATAAA	-13	NA	84441861	84449905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_73190_310	chr8	+	1493	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	91	72	0	1	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGCTCCAGCCCCAT	NA	False	NA	27	True	AATAAA	-13	NA	84441896	84449905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_73191_9	chr8	+	1566	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	91	-1	0	1	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACGTGCCATCTTTTTT	NA	False	NA	100	True	NA	NA	NA	84441896	84449978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_73192_9	chr8	+	1871	10	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	2216	junction_5	100.447885880081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	28	True	AATAAA	-14	NA	84441896	84449906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_73195_9	chr8	+	1741	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	-15	68	-15	5	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCAGCCCCATCCCT	NA	False	NA	31	True	AATAAA	-17	NA	84442161	84449909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
Isoform_73197_22	chr8	+	2438	9	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	10669	44	243	-20	3prime_fragment	FALSE	canonical	3	60	junction_5	7.22733526273688	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGGAAAAGGAAAAAAAA	1036	False	NA	NA	False	NA	NA	NA	84661448	84666596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
Isoform_73198_3	chr8	+	2719	3	ISM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	192	0	-15	0	intron_retention	FALSE	canonical	3	543	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	5908	False	NA	23	True	AATAAA	-16	NA	84682327	84696826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_84682567_84691659_84691776_84694462
Isoform_73199_52	chr8	+	1610	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	176	2	-31	-2	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTTGCTTTTTTCTC	5892	False	NA	21	True	AATAAA	-14	NA	84682311	84696824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
Isoform_732_5	chr10	-	1965	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	25	-1209	4	1	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAATTTGTTTGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	29238018	29222170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
Isoform_73200_110	chr8	+	1578	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	207	3	0	-3	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTTTTGCTTTTTTCT	5923	False	NA	20	True	AATAAA	-13	NA	84682342	84696823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
Isoform_73203_3	chr8	+	1732	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	207	-151	0	151	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGGTTGTTTTAATGT	5923	False	NA	NA	False	NA	NA	NA	84682342	84696977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
Isoform_73205_1348	chr8	+	2245	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	24	7	24	-7	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAAGTGTCGCTGGTT	476	False	NA	NA	False	AATAAA	-12	NA	84699645	84723065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
Isoform_73206_540	chr8	+	2295	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-26	7	-26	-7	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAAGTGTCGCTGGTT	426	False	NA	NA	False	AATAAA	-12	NA	84699595	84723065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
Isoform_73211_3	chr8	+	2490	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	-37	-1	-37	1	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTTATTTATTA	NA	False	NA	12	True	ATTAAA	-25	NA	84748062	84756925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
Isoform_73212_14	chr8	+	2465	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4604	-1	0	1	3prime_fragment	FALSE	canonical	3	94	junction_2	4.49305018890286	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTTATTTATTA	NA	False	NA	12	True	ATTAAA	-25	NA	84752703	84756925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
Isoform_73214_13	chr8	+	4190	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	-15	-3	-13	3	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATGACGAGAGCAGGG	NA	False	NA	24	True	AATAAA	-20	NA	84793449	84823624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
Isoform_73216_7	chr8	+	3815	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	27	9	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGAGAGCAGGGTTAGGT	NA	False	NA	30	True	AATAAA	-26	NA	84793491	84823630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
Isoform_73217_17	chr8	+	2461	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	-98	3	36	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.49826355386165	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGATCTGTAGCT	1919	False	NA	2	True	AATAAA	-12	NA	84874689	84899216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_73218_5	chr8	+	2381	8	FSM	ENSMUSG00000008129.15	ENSMUST00000093375.5	2167	8	-216	2	11	-2	multi-exon	TRUE	canonical	2	6	junction_4	5.92125193601792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGATCTGTAGCT	1894	False	NA	2	True	AATAAA	-12	NA	84874664	84899216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_73219_6	chr8	+	2438	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5.99659767480439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGATCTGTAGCTGTGC	1898	False	NA	6	True	AATAAA	-16	NA	84874668	84899220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_73220_5	chr8	+	2328	7	NIC	ENSMUSG00000008129.15	novel	2167	8	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	7.34279692397023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1901	False	NA	4	True	AATAAA	-14	NA	84874671	84899218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
Isoform_73221_43	chr8	+	2335	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	133.003230693844	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85412952	85426416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85413329_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73222_10	chr8	+	2606	16	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-17	0	intron_retention	FALSE	canonical	3	37	junction_1	134.875679382492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85412918	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85413329_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73226_146	chr8	+	2096	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	42	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415917	85426416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73230_62	chr8	+	2019	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	25	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415917	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73234_21	chr8	+	2145	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	156.933704155608	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415903	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73237_280	chr8	+	2122	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	423	22	0	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415917	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73239_26	chr8	+	2360	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415917	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73241_13	chr8	+	2084	17	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	161.765153366694	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415917	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73243_173	chr8	+	2047	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415917	85426416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73245_21	chr8	+	2296	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-5	0	intron_retention	FALSE	canonical	3	129	junction_1	113.803026712337	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415906	85426416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73247_65	chr8	+	2218	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	184	0	-16	0	3prime_fragment	FALSE	canonical	3	403	junction_2	59.8663697097312	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416076	85426415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_73252_3	chr8	+	739	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	-17	-1	-17	1	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTGGCTCACATCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	85449618	85453474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85449901_85453017
Isoform_73253_172	chr8	+	1724	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	10	760	-10	multi-exon	FALSE	canonical	3	736	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTATATATATATATAT	3434	False	NA	NA	False	NA	NA	NA	85558910	85562101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85559270_85560736
Isoform_73254_480	chr8	+	727	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	1007	760	-1007	multi-exon	FALSE	canonical	3	736	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCTCAAGTTGTGACT	3434	False	NA	36	True	AATAAA	-31	NA	85558910	85561104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85559270_85560736
Isoform_73257_7	chr8	+	1740	13	FSM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	-33	1	-2	-1	multi-exon	FALSE	canonical	3	23	junction_2	180.621996322584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583615	85595884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_73258_3	chr8	+	2322	12	ISM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	31	0	0	0	intron_retention	FALSE	canonical	3	551	junction_9	53.3163023771675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583648	85595886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852
Isoform_73259_273	chr8	+	1824	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	0	2	0	-1	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583617	85595884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_73260_5	chr8	+	1824	13	FSM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	-30	1	-2	0	multi-exon	TRUE	canonical	3	15	junction_9	182.281585435526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583615	85595885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594381_85594548_85594637_85594716_85594852_85594968_85595494
Isoform_73261_8	chr8	+	769	5	FSM	ENSMUSG00000003824.13	ENSMUST00000170296.2	929	5	110	50	28	-50	multi-exon	FALSE	canonical	3	66	junction_1	678.634428466461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598849	85614025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85598883_85599330_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_73262_233	chr8	+	764	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	94	828	12	-53	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTGGTCATACTTTAT	NA	False	NA	28	True	ATTAAA	-11	NA	85598833	85614022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_73264_134	chr8	+	613	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	12	60	12	-50	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598833	85614025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
Isoform_73267_11	chr8	+	1202	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	43	-50	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598864	85614025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
Isoform_73268_17	chr8	+	1051	3	NIC	ENSMUSG00000003824.13	novel	685	4	NA	NA	40	-50	intron_retention	FALSE	canonical	3	832	junction_1	576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598861	85614025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85599462_85612563_85612753_85613763
Isoform_73269_3	chr8	+	625	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4626	17	-44	-17	3prime_fragment	FALSE	canonical	3	74	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85639975	85641133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85640158_85640690
Isoform_73274_7	chr8	+	1135	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-15	-2	-15	2	multi-exon	FALSE	canonical	3	99	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGAGTGGGGGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	85640004	85649546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85640158_85647022_85647134_85648675
Isoform_73278_4	chr8	+	687	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-15	-17	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85640004	85641133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85640158_85640599
Isoform_73279_4	chr8	+	749	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-77	-17	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	85639942	85641133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85640158_85640599
Isoform_73280_17	chr8	+	1036	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	58	518	34	5	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696273	85700945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_73281_58	chr8	+	986	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	108	518	1	5	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696323	85700945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_73282_921	chr8	+	898	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	84	518	1	5	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696323	85700945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_73283_87	chr8	+	963	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	19	518	19	5	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696258	85700945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
Isoform_73290_23	chr8	+	2371	16	FSM	ENSMUSG00000052566.9	ENSMUST00000210326.2	3080	16	-13	722	12	-722	multi-exon	FALSE	canonical	3	335	junction_11	30.1194658356058	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717257	85725613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
Isoform_73292_378	chr8	+	2600	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	-24	4	-10	2	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717221	85729974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_73296_33	chr8	+	2601	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-10	0	intron_retention	TRUE	canonical	3	109	junction_18	72.710434300971	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717221	85729978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_73298_46	chr8	+	2561	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	2	intron_retention	FALSE	canonical	3	109	junction_18	72.710434300971	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717257	85729974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_733_50	chr10	-	1946	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	5	-3	5	3	multi-exon	FALSE	canonical	3	93	junction_2	66.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGTTTGAGTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	29238038	29222168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29223880_29230287_29230444_29237959
Isoform_73300_9	chr8	+	2806	21	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-18	2	intron_retention	FALSE	canonical	3	335	junction_11	39.5465232352984	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717213	85729974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
Isoform_73304_334	chr8	+	851	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	51	0	51	0	multi-exon	FALSE	canonical	3	920	junction_1	163	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753502	85756915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85753864_85756167_85756246_85756503
Isoform_73305_5	chr8	+	1012	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753457	85756915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85753864_85756051_85756246_85756503
Isoform_73306_5	chr8	+	957	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTGTGCTTGGTTTAT	NA	False	NA	18	True	AGTAAA	-18	NA	85753509	85756912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85753864_85756051_85756246_85756503
Isoform_73307_5	chr8	+	3195	2	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	9	-2	intron_retention	FALSE	canonical	3	1246	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGTGCTTGGTTTATC	NA	False	NA	19	True	AGTAAA	-19	NA	85753460	85756913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85756246_85756503
Isoform_73308_3	chr8	+	4865	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	115.345307362526	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763543	85784210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773812_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_73309_3	chr8	+	4829	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	70.9023193477399	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763548	85784210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_7331_1976	chr11	-	1492	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	36	157	0	3	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	1976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTAGTGTCTTG	7724	False	NA	98	True	NA	NA	NA	102298334	102293967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
Isoform_73311_4	chr8	+	4821	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-3	-2	combination_of_known_splicesites	TRUE	canonical	3	102	junction_20	83.055035301232	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763540	85784207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_73312_3	chr8	+	4788	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763546	85784210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_73313_4	chr8	+	4887	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACTTGGTGTCTCATT	NA	False	NA	13	True	AGTAAA	-15	NA	85763802	85784208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
Isoform_73315_25	chr8	+	1859	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	46	2	4	2	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTGTGAGCTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	85786729	85793748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_73316_25	chr8	+	1835	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	70	2	28	2	multi-exon	FALSE	canonical	3	54	junction_4	11.5864970366477	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTGTGAGCTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	85786753	85793748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_73317_12	chr8	+	1941	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	47	5	6	2	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTGTGAGCTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	85786731	85793748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
Isoform_73318_3	chr8	+	2024	8	NIC	ENSMUSG00000008167.15	novel	1993	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	68	junction_1	8.0483234405733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGAGTGTGAGCTTT	NA	False	NA	18	True	AATAAA	-18	NA	85786749	85793746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792992_85793073_85793140_85793218
Isoform_73320_7	chr8	+	508	2	FSM	ENSMUSG00000060038.15	ENSMUST00000129826.2	659	2	-49	200	0	-200	multi-exon	FALSE	canonical	3	212	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAAAGGGTTA	NA	False	NA	NA	False	NA	NA	NA	85798385	85799291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85798683_85799080
Isoform_73321_178	chr8	+	1333	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798385	85801791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
Isoform_73323_6	chr8	+	1268	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	460	3	-84	3	3prime_fragment	FALSE	canonical	3	191	junction_1	37.2788718406859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGCATCCTTGGTGT	NA	False	NA	20	True	AATAAA	-26	NA	85798845	85801788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
Isoform_73324_3	chr8	+	773	3	ISM	ENSMUSG00000059355.14	ENSMUST00000140621.2	630	4	-38	3	-23	-3	intron_retention	FALSE	canonical	3	586	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGCACTGTTGCTTC	NA	False	NA	26	True	TATAAA	-15	NA	85807578	85808958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85807693_85807801_85807908_85808405
Isoform_73325_172	chr8	+	710	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	210	2	-23	-2	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGCTTCTCTTTTGT	NA	False	NA	34	True	TATAAA	-23	NA	85807578	85808966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
Isoform_73326_6	chr8	+	892	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	28	2	28	-2	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGCTTCTCTTTTGT	NA	False	NA	34	True	TATAAA	-23	NA	85807396	85808966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
Isoform_73328_12	chr8	+	797	3	FSM	ENSMUSG00000059355.14	ENSMUST00000148592.2	798	3	-4	5	-4	2	multi-exon	FALSE	canonical	3	590	junction_2	13.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCACTGTTGCTTCTCTTT	NA	False	NA	31	True	TATAAA	-20	NA	85807597	85808963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85807908_85808405_85808504_85808574
Isoform_73329_3	chr8	+	1211	4	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-27	12195	-16	-2	5prime_fragment	FALSE	canonical	3	217	junction_2	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	85809916	85812716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983
Isoform_73330_147	chr8	+	3167	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-41	696	4	-696	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809902	85824215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
Isoform_73331_9	chr8	+	3046	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-12	-696	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	54.9261901431035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809920	85824215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
Isoform_73337_470	chr8	+	1165	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	122	0	-10	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026541	86034700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73339_44	chr8	+	1478	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	-191	0	-32	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026228	86034700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73343_66	chr8	+	1001	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026541	86034700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73347_29	chr8	+	1041	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	224	201	-10	6	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGAGTATTTTGCC	NA	False	NA	15	True	AATAAA	-23	NA	86026541	86034706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73348_8	chr8	+	1355	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	-91	202	-34	5	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATGAGTATTTTGC	NA	False	NA	14	True	AATAAA	-22	NA	86026226	86034705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73349_14	chr8	+	876	5	NIC	ENSMUSG00000031697.13	novel	1466	6	NA	NA	-10	5	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	431.436264122524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATGAGTATTTTGC	NA	False	NA	14	True	AATAAA	-22	NA	86026541	86034705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_86026622_86029990_86030081_86031837_86031951_86032845_86032948_86034214
Isoform_73355_399	chr8	+	3624	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	15	0	15	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219219	86254189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_73356_514	chr8	+	3312	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	31	296	0	-296	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAAGTAGGATGGCTGG	NA	False	NA	23	True	AATAAA	-24	NA	86219235	86253893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_73359_24	chr8	+	3665	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-28	2	-28	-2	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGCAGCTTGGTCAAT	NA	False	NA	11	True	AATAAA	-17	NA	86219176	86254187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_7336_64	chr11	-	1560	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-34	159	-34	1	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGCTGTAGTGTCT	7654	False	NA	96	True	NA	NA	NA	102298404	102293969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
Isoform_73360_35	chr8	+	3366	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-26	299	-26	-299	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTCAAGTAGGATGGC	NA	False	NA	20	True	AATAAA	-21	NA	86219178	86253890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_73361_36	chr8	+	2004	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-26	1661	-26	219	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTCTCTGAATCGCT	NA	False	NA	24	True	NA	NA	NA	86219178	86252528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
Isoform_73369_5	chr8	+	4586	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	24.7210030475169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAATGTCTGCTTT	NA	False	NA	6	True	NA	NA	NA	86567612	86787268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_73370_15	chr8	+	4611	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	6	734	0	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567636	86787271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_73372_6	chr8	+	4584	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGTCTGCTTTCCAAT	NA	False	NA	11	True	NA	NA	NA	86567648	86787273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_73373_4	chr8	+	4522	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567616	86787271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
Isoform_73374_73	chr8	+	2410	13	FSM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	-35	-4	27	3	multi-exon	TRUE	non_canonical	0	0	junction_3	73.1522385166715	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTCTCCAGTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	87350698	87443263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
Isoform_73377_207	chr8	+	2832	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	31	-4	-31	3	multi-exon	FALSE	canonical	3	174	junction_5	34.038693468775	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTCTCCAGTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	87350702	87443263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
Isoform_73379_7	chr8	+	610	5	NIC	ENSMUSG00000097248.10	novel	682	4	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	79.1023861839831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	175	False	NA	7	True	AATAAA	-15	NA	88199416	88252182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_88199589_88240436_88240525_88248363_88248442_88250923_88251056_88252042
Isoform_73380_20	chr8	+	522	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-23	-1	-23	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	175	False	NA	7	True	AATAAA	-15	NA	88199416	88252182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
Isoform_73381_4	chr8	+	544	5	NIC	ENSMUSG00000097248.10	novel	432	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	86.1434124004848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	216	False	NA	5	True	AATAAA	-13	NA	88199750	88252180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_88199859_88240436_88240525_88248363_88248442_88250923_88251056_88252042
Isoform_73382_17	chr8	+	445	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182758.2	447	4	2	0	2	0	multi-exon	FALSE	canonical	3	44	junction_1	69.6866000191014	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	229	False	NA	7	True	AATAAA	-15	NA	88199763	88252182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_88199859_88248363_88248442_88250923_88251056_88252042
Isoform_73383_9	chr8	+	1361	6	NIC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	70.6070817977914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGCTTTGTGTGGTTT	NA	False	NA	14	True	NA	NA	NA	88845396	88858312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88857363
Isoform_73384_66	chr8	+	1732	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	-1	0	1	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAGTGGTTAGAGATTT	NA	False	NA	10	True	AATAAA	-12	NA	88845396	88861735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
Isoform_73388_156	chr8	+	3164	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	2	85	1	-55	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	88864484	88898570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
Isoform_73391_6	chr8	+	2323	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	-32	744	-32	537	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTAGTG	NA	False	NA	NA	False	NA	NA	NA	89247949	89319502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
Isoform_73393_4	chr8	+	2551	14	ISM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-36	6059	-8	4190	5prime_fragment	TRUE	canonical	3	35	junction_1	10.2518579640949	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACAGTCCTTAGTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	89423666	89469024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913
Isoform_73394_5	chr8	+	2270	6	ISM	ENSMUSG00000056608.15	ENSMUST00000109614.9	11565	40	25	77557	4	1	5prime_fragment	FALSE	canonical	2	7	junction_2	4.75815090134813	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCAGAAGATGCA	NA	False	NA	15	True	NA	NA	NA	91555487	91703579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_91555543_91576261_91576388_91658876_91660491_91683010_91683343_91699752_91699865_91703548
Isoform_73395_6	chr8	+	4915	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	5	5	5	-3	multi-exon	FALSE	canonical	3	13	junction_12	4.6442610819949	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTCTCTGTTTAGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	91796689	91850467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
Isoform_73397_266	chr8	+	3530	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	25	9	-8	-9	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGAGCGTCCGTG	NA	False	NA	7	True	AATAAA	-15	NA	92040177	92395058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
Isoform_73401_34	chr8	+	3061	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	17	0	17	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	4	True	AATAAA	-19	NA	93553935	93580048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
Isoform_73402_9	chr8	+	2020	14	FSM	ENSMUSG00000033192.6	ENSMUST00000046290.3	2811	14	12	779	12	-323	multi-exon	TRUE	canonical	2	3	junction_10	2.47591952914324	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCACTGGTCAGCAATT	NA	False	NA	NA	False	AATAAA	-18	NA	93581978	93645128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
Isoform_73403_64	chr8	+	1996	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	62	3252	0	-3252	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTTCGTTCTGTAGTA	NA	False	NA	12	True	NA	NA	NA	94763887	94791297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
Isoform_73404_27	chr8	+	5261	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	45	junction_13	32.7128442284494	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGGTGGTAATTTATA	NA	False	NA	7	True	AATAAA	-17	NA	94763854	94794549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806_94792872_94792891
Isoform_73405_16	chr8	+	4348	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	62	900	0	-900	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTATTGAAGATGGAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	94763887	94793649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
Isoform_73408_6	chr8	+	400	3	FSM	ENSMUSG00000031760.10	ENSMUST00000034211.10	536	3	137	-1	-2	1	multi-exon	FALSE	canonical	3	14	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGACTGGTCTCTTTT	NA	False	NA	8	True	AATAAA	-18	NA	94879371	94880775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94879459_94879652_94879719_94880528
Isoform_73409_2108	chr8	+	383	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	120	8	-76	-4	multi-exon	FALSE	canonical	3	13494	junction_2	132	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCAGCTTGTCTCTGT	NA	False	NA	29	True	AATAAA	-15	NA	94899411	94900188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_73410_505	chr8	+	475	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	31	5	31	-1	multi-exon	FALSE	canonical	3	13494	junction_2	132	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCTTGTCTCTGTGCA	NA	False	NA	32	True	AATAAA	-18	NA	94899322	94900191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_73412_65	chr8	+	562	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	-56	5	-56	-1	multi-exon	FALSE	canonical	3	13494	junction_2	132	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCTTGTCTCTGTGCA	NA	False	NA	32	True	AATAAA	-18	NA	94899235	94900191	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94899504_94899754_94899821_94899963
Isoform_73419_3460	chr8	+	389	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	159	1	0	1	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	3460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTTTTCTTGGTGTG	NA	False	NA	28	True	AATAAA	-17	NA	94905868	94906954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94905967_94906450_94906517_94906729
Isoform_73420_844	chr8	+	520	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	28	1	28	1	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTTTTCTTGGTGTG	NA	False	NA	28	True	AATAAA	-17	NA	94905737	94906954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94905967_94906450_94906517_94906729
Isoform_73421_173	chr8	+	555	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	-7	1	-7	1	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTTTTCTTGGTGTG	NA	False	NA	28	True	AATAAA	-17	NA	94905702	94906954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94905967_94906450_94906517_94906729
Isoform_73427_69	chr8	+	2743	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-25	210	-1	-4	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941203	95041484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
Isoform_73429_1771	chr8	+	2687	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	16	4	3	-4	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941207	95041484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
Isoform_73437_152	chr8	+	1877	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	57	18	0	1	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113122	95121987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_73438_39	chr8	+	1953	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	-5	4	-5	-4	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCAAGCTTGCTGT	NA	False	NA	43	True	AATAAA	-36	NA	95113060	95122001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_73439_11	chr8	+	1874	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	0	-1	0	1	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113122	95121987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_73440_4	chr8	+	1947	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	-68	-6	-11	0	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCATTGTCCTGGCAA	NA	False	NA	34	True	AATAAA	-27	NA	95113054	95121992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
Isoform_73441_7	chr8	+	2196	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	1	145	1	-4	multi-exon	FALSE	canonical	2	2	junction_4	2.64491125665032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGGCTTTTTCTAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	95259618	95297014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
Isoform_73443_5	chr8	+	2973	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-91	515	-3	7	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAATTGTTGACTCTG	8149	False	NA	15	True	AATAAA	-26	NA	95328602	95386388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_73449_14	chr8	+	3306	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	31	515	2	7	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAATTGTTGACTCTG	8142	False	NA	15	True	AATAAA	-26	NA	95328595	95386388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_73450_13	chr8	+	3419	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	12	421	12	101	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	8123	False	NA	109	True	NA	NA	NA	95328576	95386482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_73451_14	chr8	+	3328	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	9	515	9	7	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAATTGTTGACTCTG	8120	False	NA	15	True	AATAAA	-26	NA	95328573	95386388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
Isoform_73452_78	chr8	+	1996	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	66	1	-57	-1	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGATGTGCATTGTC	NA	False	NA	11	True	AGTAAA	-24	NA	95393293	95401052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
Isoform_73453_33	chr8	+	2027	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	34	2	34	-2	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGATGTGCATTGT	NA	False	NA	10	True	AGTAAA	-23	NA	95393261	95401051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
Isoform_73456_20	chr8	+	3116	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	195	4	0	-4	multi-exon	FALSE	canonical	2	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGGGAACTTTTCTC	2374	False	NA	NA	False	AATAAA	-20	NA	95498831	95509051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95498963_95504655_95504777_95506187
Isoform_73457_33	chr8	+	1692	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	92	5	-2	-5	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATTTCTTGTTGTTTTG	NA	False	NA	4	True	AATAAA	-10	NA	95565040	95581518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
Isoform_73458_1657	chr8	+	1173	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	76	331	8	170	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	1657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584153	95590539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
Isoform_73466_79	chr8	+	3404	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	196	16	194	2	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	875	False	NA	30	True	AATAAA	-43	NA	95703930	95740829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_73468_25	chr8	+	3601	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	1	14	1	4	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCCGTCTCAGTTTT	680	False	NA	32	True	AATAAA	-45	NA	95703735	95740831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
Isoform_7347_31	chr11	-	2033	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	53	4785	30	-3493	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAGAAACACAAA	690	False	NA	NA	False	AAGAAA	-29	NA	102446972	102371525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_73470_19	chr8	+	2534	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	93	1150	93	-1150	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTATGAGAGGAATATCC	902	False	NA	16	True	ATTAAA	-20	NA	95807906	95825689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
Isoform_73472_8	chr8	+	1732	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCTTATTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	96058919	96074136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_73473_241	chr8	+	1738	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	19	1	0	-1	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTGTCTTATTTTA	NA	False	NA	11	True	AATAAA	-12	NA	96058930	96074134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_73475_19	chr8	+	2088	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	-329	-1	-329	1	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCTTATTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	96058582	96074136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_73476_3	chr8	+	2563	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	81.9505270812146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCTTATTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	96058924	96074136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96059911_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
Isoform_73477_44	chr8	+	4347	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	1	787	1	-787	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTCTACAGGGGCAG	NA	False	NA	8	True	AATAAA	-17	NA	96078896	96100921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
Isoform_73480_3	chr8	+	1268	9	FSM	ENSMUSG00000036598.5	ENSMUST00000041569.5	1288	9	17	3	17	-3	multi-exon	FALSE	canonical	2	7	junction_1	2.77263412660235	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGGTCCTCTCACTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	96260729	96285515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96260901_96263092_96263220_96264719_96264882_96267426_96267583_96269249_96269331_96272521_96272678_96277824_96277933_96283818_96283975_96285364
Isoform_73481_8	chr8	+	2548	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	-41	-1853	-41	1853	multi-exon	FALSE	canonical	3	101	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	96360140	96366714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96360412_96364437
Isoform_73483_34	chr8	+	2443	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	75	1	-26	-1	multi-exon	FALSE	canonical	3	97	junction_2	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTTGTCACTAACT	NA	False	NA	NA	False	AATAAA	-13	NA	96360155	96371687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96360412_96364437_96364672_96369734
Isoform_73489_10	chr8	+	2745	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-9	2	-9	2	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTCGTGTTTCCTA	NA	False	NA	7	True	AATAAA	-12	NA	96429681	96441582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
Isoform_7349_3	chr11	-	2207	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	-115	4779	78	-3487	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAACACAAAAAATCC	522	False	NA	NA	False	AAGAAA	-35	NA	102447140	102371519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_73490_9	chr8	+	1358	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCAAACTTTCTT	NA	False	NA	33	True	AATAAA	-20	NA	96442544	96445632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
Isoform_73492_12	chr8	+	1610	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	127.266998428064	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442538	96445634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444548_96444730_96444820_96444964_96445103
Isoform_73493_273	chr8	+	1670	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	32	5	-2	-5	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442540	96445633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
Isoform_73496_31	chr8	+	2549	6	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	282	junction_1	51.2312404690732	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442540	96445633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_73498_8	chr8	+	2670	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	282	junction_1	51.8338692362436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAACTTTCTTTAGCA	NA	False	NA	38	True	AATAAA	-25	NA	96442535	96445637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96442899_96442980_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_73499_9	chr8	+	2618	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	13	-3	intron_retention	FALSE	canonical	3	305	junction_1	43.5280082245903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442555	96445635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_73502_12	chr8	+	2738	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-10	intron_retention	FALSE	canonical	3	362	junction_1	30.2140511829991	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAGAAGTTCAAACTT	NA	False	NA	29	True	AATAAA	-16	NA	96442540	96445628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96443430_96443548_96444730_96444820_96444964_96445103
Isoform_73503_6	chr8	+	2837	3	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	362	junction_1	33	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAAGTTCAAACTTTC	NA	False	NA	31	True	AATAAA	-18	NA	96442534	96445630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96443430_96443548_96444964_96445103
Isoform_73505_6	chr8	+	1564	3	FSM	ENSMUSG00000031671.12	ENSMUST00000141900.8	378	3	-700	-486	-4	-5	multi-exon	TRUE	canonical	3	24	junction_1	202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442538	96445633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96443430_96444820_96444964_96445103
Isoform_73507_23	chr8	+	2954	2	NIC	ENSMUSG00000031671.12	novel	774	4	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	428	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCAAACTTTCTT	NA	False	NA	33	True	AATAAA	-20	NA	96442538	96445632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_96444964_96445103
Isoform_73508_9	chr8	+	1225	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	50	29	2	-29	multi-exon	FALSE	canonical	3	282	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAACAAAAACAAAA	4863	False	NA	NA	False	NA	NA	NA	104977563	104984977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_104977728_104983916
Isoform_7351_7	chr11	-	2353	2	FSM	ENSMUSG00000034621.15	ENSMUST00000125754.2	893	2	224	-1684	8	794	multi-exon	FALSE	canonical	3	159	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAGAAAA	668	False	NA	NA	False	AATAGA	-12	NA	102446994	102426918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102429183_102446905
Isoform_73510_29	chr8	+	628	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	39	0	-3	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4831	False	NA	10	True	ATTAAA	-22	NA	104977531	104990079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
Isoform_73511_6	chr8	+	1577	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	39	0	39	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067264	105074304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_73512_16	chr8	+	1474	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	142	0	20	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067367	105074304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
Isoform_73513_3	chr8	+	1389	6	NNC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	68	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.7784663386528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACTGACTACATGCT	NA	False	NA	-3	True	AAAAAG	-14	NA	105067415	105074288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363_105073750_105073770
Isoform_73514_3	chr8	+	2083	6	NNC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	-37	574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.7784663386528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACAGTATTCATTAGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	105067310	105074878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363_105073750_105073771
Isoform_73515_15	chr8	+	2171	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	19	3502	19	-3502	multi-exon	FALSE	canonical	3	69	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGACCCAGTTGCAGAT	NA	False	NA	NA	False	AATAAA	-15	NA	105318101	105322156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105318228_105320111
Isoform_73516_15	chr8	+	2070	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	21	3601	21	-3601	multi-exon	FALSE	canonical	3	69	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCCCATGTCCTTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	105318103	105322057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105318228_105320111
Isoform_73517_12	chr8	+	3485	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	20	2187	20	-2187	multi-exon	FALSE	canonical	3	69	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105318102	105323471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105318228_105320111
Isoform_73519_13	chr8	+	2312	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	-15	586	-15	-578	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGTGCATGATAAGGATT	3731	False	NA	32	True	AATAAA	-21	NA	105897290	105944035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_7352_3	chr11	-	494	2	ISM	ENSMUSG00000078640.10	ENSMUST00000107080.2	585	3	277	-94	277	1	3prime_fragment	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTCTTTTTTTTTT	8857	False	NA	NA	False	NA	NA	NA	102469668	102467222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_102467624_102469575
Isoform_73520_4	chr8	+	2888	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	-12	7	-12	1	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGTCATGACTCTTT	3734	False	NA	75	True	ATTAAA	-15	NA	105897293	105944614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
Isoform_73522_8	chr8	+	2354	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	-32	569	-17	-569	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAGGATTGTGTTTGAA	3729	False	NA	41	True	AATAAA	-30	NA	105897288	105944044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
Isoform_73524_14	chr8	+	2963	16	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	66.0092922751537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGAGCTGTTGATTTC	NA	False	NA	NA	False	NA	NA	NA	105951816	105979682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
Isoform_73526_295	chr8	+	2870	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	42	4	-19	-4	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951818	105979681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
Isoform_73530_7	chr8	+	2626	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	-6	296	-6	1	multi-exon	TRUE	canonical	3	239	junction_9	14.7126551724093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCCTCATCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105951770	105979389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
Isoform_73533_7	chr8	+	1856	3	FSM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	41	4	7	-4	multi-exon	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCTGTGATCTCGAGTC	1571	False	NA	NA	False	AATAAA	-16	NA	105991320	105995954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_105991393_105993326_105993798_105994641
Isoform_73534_5	chr8	+	1592	3	NNC	ENSMUSG00000033313.12	novel	1901	3	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCCTGTGATCTCGAG	1558	False	NA	NA	False	AATAAA	-14	NA	105991307	105995952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_105991393_105993601_105993798_105994641
Isoform_73536_25	chr8	+	2062	9	ISM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	26	0	26	0	intron_retention	TRUE	canonical	0	0	junction_3	391.220126655058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024320	106032002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064
Isoform_73538_589	chr8	+	1956	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	37	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_3	369.398142461925	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024331	106032002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
Isoform_7354_154	chr11	-	2324	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	42	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588566	102575511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_73543_43	chr8	+	2408	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-2	783	-2	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	6	True	AATAAA	-17	NA	106032238	106036609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_73544_7	chr8	+	2291	19	NIC	ENSMUSG00000014791.11	novel	3189	20	NA	NA	-1	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.12403840463596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAACCTGTGGGCTAA	NA	False	NA	22	True	AATAAA	-33	NA	106032239	106036625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_73545_13	chr8	+	2378	19	FSM	ENSMUSG00000014791.11	ENSMUST00000212033.2	2351	19	-6	-21	-2	21	multi-exon	FALSE	canonical	1	1	junction_3	8.33425920782464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGTGGGCTAAACCTG	NA	False	NA	27	True	AATAAA	-38	NA	106032238	106036630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
Isoform_73547_3	chr8	+	988	4	ISM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-11	-3	-11	0	intron_retention	FALSE	canonical	3	392	junction_2	12.9614813968157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	274	False	NA	16	True	AATAAA	-18	NA	106053008	106055687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953
Isoform_73548_145	chr8	+	760	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	23	2	-11	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	274	False	NA	16	True	AATAAA	-18	NA	106053008	106055687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
Isoform_73549_13	chr8	+	798	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	3	0	3	0	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	262	False	NA	16	True	AATAAA	-18	NA	106052996	106055687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
Isoform_7355_528	chr11	-	2301	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588543	102575511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_73550_39	chr8	+	910	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-11	-4	-11	1	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCGTGTGGGTGATGAT	274	False	NA	17	True	AATAAA	-19	NA	106053008	106055688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
Isoform_73559_19	chr8	+	3836	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.917955452517	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAAGACTCCGTCT	NA	False	NA	35	True	AATAAA	-18	NA	106363152	106409551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397923_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
Isoform_73560_18	chr8	+	3836	12	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_10	67.2234463229697	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363153	106409554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
Isoform_73562_8	chr8	+	4356	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	-113	-49	-113	5	multi-exon	TRUE	canonical	3	28	junction_20	8.5824984578148	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412792	106424824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
Isoform_73563_31	chr8	+	1248	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	1	-571	1	1	multi-exon	FALSE	canonical	0	0	junction_1	13	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427780	106430126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106427919_106428805_106429029_106429239
Isoform_73564_18	chr8	+	1237	3	NIC	ENSMUSG00000005699.17	novel	1273	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427787	106430125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106427919_106428805_106429029_106429242
Isoform_73565_7	chr8	+	1273	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	-5	5	1	-2	multi-exon	FALSE	canonical	2	20	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAGATGTGGTCCTTCT	NA	False	NA	6	True	ATTAAA	-12	NA	106427780	106430120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106427950_106428805_106429029_106429239
Isoform_73566_17	chr8	+	1265	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	-27	-4	6	1	multi-exon	FALSE	canonical	2	20	junction_1	6.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106427791	106430126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106427950_106428805_106429029_106429242
Isoform_73567_5	chr8	+	1254	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	7	4	5	-2	multi-exon	FALSE	canonical	3	15	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAGATGTGGTCCTTCT	NA	False	NA	6	True	ATTAAA	-12	NA	106428285	106430120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106428436_106428805_106429029_106429239
Isoform_73568_11	chr8	+	1256	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	6	-1	6	1	multi-exon	FALSE	canonical	3	15	junction_1	9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	False	NA	12	True	ATTAAA	-18	NA	106428286	106430126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106428436_106428805_106429029_106429242
Isoform_73570_38	chr8	+	1995	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	23	-1070	-8	1070	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGGTCTCTTTATTCC	NA	False	NA	26	True	AATAAA	-13	NA	106587234	106607032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_73571_423	chr8	+	885	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	75	-12	-10	12	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTTTAATTAGTTAAG	NA	False	NA	4	True	AATAAA	-27	NA	106587286	106605974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_73573_383	chr8	+	932	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	23	-7	-8	7	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAATTGTTTTAATTAG	NA	False	NA	-1	True	AATAAA	-22	NA	106587234	106605969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
Isoform_73577_7	chr8	+	4734	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	28	-7	intron_retention	FALSE	canonical	3	40	junction_14	98.4644605936578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3284	False	NA	7	True	ATTAAA	-14	NA	106607540	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73578_9	chr8	+	4709	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-20	-7	intron_retention	FALSE	canonical	3	40	junction_14	87.3799176012429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3306	False	NA	7	True	ATTAAA	-14	NA	106607562	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73579_57	chr8	+	4729	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	30	-7	intron_retention	FALSE	canonical	3	128	junction_16	71.6479755328731	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3286	False	NA	7	True	ATTAAA	-14	NA	106607542	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73580_8	chr8	+	4673	29	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-32	-7	intron_retention	FALSE	canonical	3	70	junction_18	95.2952112958378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3294	False	NA	7	True	ATTAAA	-14	NA	106607550	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73581_89	chr8	+	4740	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	16	24	16	-7	multi-exon	TRUE	canonical	3	268	junction_16	54.5128121057194	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3272	False	NA	7	True	ATTAAA	-14	NA	106607528	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73583_21	chr8	+	4673	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	-35	7	35	-7	multi-exon	FALSE	canonical	3	70	junction_18	83.7903344847198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3291	False	NA	7	True	ATTAAA	-14	NA	106607547	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73584_8	chr8	+	4724	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	31	-9	intron_retention	FALSE	canonical	0	0	junction_12	104.763892703	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAAGTATGTGTGTG	3287	False	NA	5	True	ATTAAA	-12	NA	106607543	106619831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614415_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73585_21	chr8	+	4724	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	30	-7	intron_retention	FALSE	canonical	0	0	junction_12	94.6201522630656	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTATGTGTGTGAT	3286	False	NA	7	True	ATTAAA	-14	NA	106607542	106619833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614415_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
Isoform_73588_159	chr8	+	3291	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-9	-27	-9	27	multi-exon	FALSE	canonical	3	44	junction_1	10	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGACTGTGCCATGGGAC	NA	False	NA	14	True	AATAAA	-44	NA	106627063	106658437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106627173_106639251_106640279_106656282
Isoform_73591_129	chr8	+	1863	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	0	-3	0	3	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTGCTTCAACCTTAC	NA	False	NA	15	True	AATAAA	-15	NA	106738138	106780454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
Isoform_73592_9	chr8	+	1822	15	FSM	ENSMUSG00000031901.13	ENSMUST00000119736.8	1837	15	1	14	1	7	multi-exon	TRUE	canonical	3	13	junction_4	52.5452186216786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTCAACCTTACATCC	NA	False	NA	19	True	AATAAA	-19	NA	106738139	106780458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
Isoform_73593_5	chr8	+	3923	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-30	2091	-30	3	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTTCCAGA	NA	False	NA	NA	False	AATAGA	-12	NA	106786234	106855078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
Isoform_73594_4	chr8	+	1180	2	FSM	ENSMUSG00000086390.8	ENSMUST00000145343.2	984	2	0	-196	0	196	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTGGTATTTTGCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	106863696	106865353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106863983_106864459
Isoform_73595_178	chr8	+	2693	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	12	1	12	-1	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCCTTGTCCTGCTCTG	6209	False	NA	13	True	AATAAA	-19	NA	106877042	106891346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
Isoform_73596_7	chr8	+	2568	6	FSM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	12	-2	12	-1	multi-exon	FALSE	canonical	1	1	junction_4	47.4088599314516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCCTTGTCCTGCTCTG	6209	False	NA	13	True	AATAAA	-19	NA	106877042	106891346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887840_106887941_106889456
Isoform_73597_4	chr8	+	2314	2	ISM	ENSMUSG00000031904.6	ENSMUST00000213020.2	3200	9	18	16154	7	1693	5prime_fragment	FALSE	canonical	3	200	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAACA	1868	False	NA	NA	False	NA	NA	NA	106895524	106907985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_106895587_106905733
Isoform_73598_80	chr8	+	3048	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	18	684	0	177	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCTGGAATGTTCTAC	1850	False	NA	12	True	AATAAA	-27	NA	106895506	106924654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_73599_5	chr8	+	5496	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	29	-1775	0	1775	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATACTGTTCCTTGGTAC	1861	False	NA	NA	False	ATTAAA	-15	NA	106895517	106927113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_736_4	chr10	-	2531	4	NNC	ENSMUSG00000038876.13	novel	4402	4	NA	NA	4	607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.7445715692059	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGGGTTATGTGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	29238039	29221564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_29222176_29222195_29223880_29230287_29230444_29237959
Isoform_73600_25	chr8	+	3737	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	18	-5	0	5	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATTGGTTCTGGACA	1850	False	NA	9	True	AATAAA	-23	NA	106895506	106925343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_73604_5	chr8	+	3175	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	35	168	intron_retention	FALSE	canonical	3	12	junction_1	155.192671966491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGCAAGAGGCCTGGA	1896	False	NA	3	True	AATAAA	-18	NA	106895552	106924645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_106895769_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
Isoform_73608_3769	chr8	+	2284	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1101	0	-1101	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	3769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTGTGGCTCAATGGG	1906	False	NA	25	True	AATAAA	-26	NA	106937654	106978325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_73609_64	chr8	+	2338	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	33	1101	33	-1101	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTGTGGCTCAATGGG	1852	False	NA	25	True	AATAAA	-26	NA	106937600	106978325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_73610_48	chr8	+	3372	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	13	0	-13	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAAAGTTTCTTCTT	1906	False	NA	NA	False	TATAAA	-45	NA	106937654	106979413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
Isoform_73624_7	chr8	+	2482	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	-10	160	2	0	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGCTTCTTGTAGAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	107141960	107152361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
Isoform_73625_82	chr8	+	3239	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-34	1179	-34	-1179	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGAGGTGCTAGGGG	NA	False	NA	0	True	ATTAAA	-14	NA	107237488	107282750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
Isoform_73628_3	chr8	+	2259	8	ISM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	30323	1178	30323	-1178	3prime_fragment	FALSE	canonical	3	46	junction_1	3.65334624358412	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGAGGTGCTAGGGGA	NA	False	NA	1	True	ATTAAA	-15	NA	107267845	107282751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
Isoform_73632_872	chr8	+	4413	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	17	0	-11	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5066	False	NA	26	True	ATTAAA	-18	NA	107329999	107396878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
Isoform_73635_108	chr8	+	4447	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-17	0	-17	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5032	False	NA	26	True	ATTAAA	-18	NA	107329965	107396878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
Isoform_7364_23	chr11	-	2257	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-196	-1654	2	0	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588558	102575511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
Isoform_73642_19	chr8	+	4409	15	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	765	0	-27	0	3prime_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5814	False	NA	26	True	ATTAAA	-18	NA	107330747	107396878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
Isoform_7365_23	chr11	-	972	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTTCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	102588543	102579144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
Isoform_73658_184	chr8	+	3817	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	17	575	17	-575	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCACCGAGCTGGTT	1130	False	NA	40	True	AATAAA	-41	NA	107409716	107577496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
Isoform_7366_13	chr11	-	1343	3	FSM	ENSMUSG00000020925.17	ENSMUST00000138147.2	875	3	-71	-397	-7	397	multi-exon	FALSE	canonical	3	524	junction_2	39	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAGATAGA	NA	False	NA	NA	False	NA	NA	NA	102588567	102580138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102581163_102582936_102583025_102588336
Isoform_73663_1347	chr8	+	2230	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	5	-3	5	3	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	1347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACATTTTAAATTATTT	NA	False	NA	15	True	AATAAA	-20	NA	107620287	107649723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
Isoform_7367_61	chr11	-	2131	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710006	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
Isoform_73674_28	chr8	+	4433	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-9	5521	-9	1013	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAATAAA	NA	False	NA	NA	False	AATAAA	-45	NA	107662372	107740825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
Isoform_73675_11	chr8	+	4489	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-65	5521	-65	1013	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAATAAA	NA	False	NA	NA	False	AATAAA	-45	NA	107662316	107740825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
Isoform_7368_7	chr11	-	2390	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-229	-5	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710265	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
Isoform_73683_168	chr8	+	2087	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	92	-1	92	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107757945	107772388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
Isoform_73684_10	chr8	+	2143	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	36	-1	36	1	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107757889	107772388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
Isoform_73685_10	chr8	+	1817	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	69	292	69	-292	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAAGGAGTGGGAGCT	NA	False	NA	9	True	AATAAA	-18	NA	107757922	107772095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
Isoform_73688_9	chr8	+	3009	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	21	6	-3	-6	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAGTTGTCTCCGTATC	NA	False	NA	13	True	ATTAAA	-14	NA	107783529	107787557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
Isoform_73689_399	chr8	+	1114	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	21	1901	-3	364	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTATTTCATATGTG	NA	False	NA	21	True	AATAAA	-15	NA	107783529	107785662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
Isoform_7369_13	chr11	-	2240	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-2	103	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTTTAAGATCTATCT	NA	False	NA	-5	True	NA	NA	NA	102710007	102690301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
Isoform_73693_11	chr8	+	1235	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	7	378	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGAGTGTTTTGTTG	NA	False	NA	35	True	AATAAA	-29	NA	107783515	107785676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
Isoform_73694_114	chr8	+	4300	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	2	14	2	-14	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTCCTGACTACGG	NA	False	NA	3	True	AATAAA	-14	NA	107877273	107914089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
Isoform_73698_503	chr8	+	944	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	2	3370	2	-1889	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	38	True	AGTAAA	-20	NA	107877273	107910733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
Isoform_737_25	chr10	-	1967	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	359	1997	-36	3	multi-exon	FALSE	canonical	3	77	junction_2	74.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGTTTGAGTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	29238079	29222168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29223880_29230287_29230444_29237979
Isoform_73714_422	chr8	+	2924	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	9	1381	9	1	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGTTGCAAAGCCAGAG	NA	False	NA	12	True	AATAAA	-23	NA	108163005	108283846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_73716_690	chr8	+	2897	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	35	1382	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163031	108283845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_73717_63	chr8	+	4284	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	30	0	-5	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108163026	108285227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_73719_17	chr8	+	2759	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	0	-1	0	0	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163031	108283845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
Isoform_7372_25	chr11	-	2036	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710001	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
Isoform_73727_7	chr8	+	1799	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	92	-1	92	1	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTTGTCTGTCCATCA	NA	False	NA	16	True	AATAAA	-25	NA	110292615	110300684	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
Isoform_73728_9	chr8	+	2162	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	-35	0	-32	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432145	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73729_20	chr8	+	2053	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	74	0	3	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432254	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73730_31	chr8	+	2093	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432233	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73731_8	chr8	+	2181	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	9	True	AATAAA	-22	NA	110432146	110451565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73732_3	chr8	+	2013	8	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	6.75821495572278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432178	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73733_8	chr8	+	1938	8	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	6.75821495572278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432253	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73734_6	chr8	+	2050	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	-17	0	-17	0	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432160	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_73735_17	chr8	+	1948	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	85	0	11	0	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432262	110451564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
Isoform_7374_204	chr11	-	1880	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	18	5	18	-5	multi-exon	FALSE	canonical	3	506	junction_2	138	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102709987	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_73740_9	chr8	+	4133	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-266	-175	86	175	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTAAGAGTGCCGAG	NA	False	NA	1	True	ATTAAA	-14	NA	110505271	110588165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_73742_16	chr8	+	3924	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-238	6	114	-6	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCGTTCCCACATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110505299	110587984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_73743_5	chr8	+	6813	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-271	-2850	81	4	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGCTGCCTTGCTTCT	NA	False	NA	20	True	AATAAA	-22	NA	110505266	110590840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_73744_8	chr8	+	4020	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-334	6	18	-6	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCGTTCCCACATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110505203	110587984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
Isoform_73745_12	chr8	+	2400	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-46	826	-28	-826	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAACTAAAAAA	907	False	NA	NA	False	AATGAA	-16	NA	110806349	110816816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
Isoform_73746_8	chr8	+	2338	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-32	2557	-16	-826	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAACTAAAAAA	919	False	NA	NA	False	AATGAA	-16	NA	110806361	110816816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
Isoform_73747_11	chr8	+	1465	10	FSM	ENSMUSG00000095941.4	ENSMUST00000213641.2	1649	10	235	-51	235	51	multi-exon	FALSE	canonical	3	15	junction_3	3.97523195999963	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCGATTGTGTGTTTC	NA	False	NA	9	True	AATAAA	-16	NA	110828073	110838644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110828167_110835615_110835726_110835834_110835858_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
Isoform_73748_3	chr8	+	1484	10	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	234	51	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	6.23807504338587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCGATTGTGTGTTTC	NA	False	NA	9	True	AATAAA	-16	NA	110828072	110838644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_110828167_110835597_110835726_110835834_110835858_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
Isoform_73749_63	chr8	+	3366	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-9	188	-9	-188	multi-exon	TRUE	canonical	3	60	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTAATTTGTCATTAT	3631	False	NA	12	True	AATAAA	-19	NA	110944611	110950930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110944719_110947671
Isoform_7375_27	chr11	-	1986	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	19	-102	19	102	multi-exon	FALSE	canonical	3	506	junction_2	138	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGTTTAAGATCTATC	NA	False	NA	-6	True	NA	NA	NA	102709986	102690302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_73750_28	chr8	+	3550	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-3	-2	-3	2	multi-exon	FALSE	canonical	3	60	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTGTTTCATT	3637	False	NA	NA	False	AATAAA	-15	NA	110944617	110951120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_110944719_110947671
Isoform_73752_4	chr8	+	2043	8	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247113	76761	69601	45871	internal_fragment	FALSE	canonical	3	20	junction_2	3.48173074484398	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTCTTTAATATTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	111240721	111260124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
Isoform_73754_22	chr8	+	2309	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	6	3695	1	1	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGGGTTAATTGCTC	7371	False	NA	NA	False	NA	NA	NA	111345240	111437316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
Isoform_73756_22	chr8	+	2333	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-18	3695	0	1	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGGGTTAATTGCTC	7347	False	NA	NA	False	NA	NA	NA	111345216	111437316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
Isoform_73759_17	chr8	+	2558	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-16	1332	2	101	5prime_fragment	FALSE	canonical	3	368	junction_15	41.455548482682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTAGTTTTGTCTGTTT	7349	False	NA	NA	False	GATAAA	-35	NA	111345218	111439679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
Isoform_7376_26	chr11	-	1922	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-24	5	7	-5	multi-exon	FALSE	canonical	3	506	junction_2	138	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710029	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_73760_930	chr8	+	3059	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	9	1	0	1	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGTCTGCCTGCTCCTT	7370	False	NA	15	True	AATAAA	-19	NA	111345239	111447029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
Isoform_73761_18	chr8	+	2929	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_17	108.822098559751	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGTCTGCCTGCTCCTT	7349	False	NA	15	True	AATAAA	-19	NA	111345218	111447029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111446438
Isoform_73764_3	chr8	+	3029	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	229	1459	229	6	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTATGTGGGGCAAGC	NA	False	NA	19	True	AATAAA	-20	NA	111448336	111466573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
Isoform_73768_1032	chr8	+	2734	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	4	-1	-1	1	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	1032	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGTTGGGTCCAGG	9632	False	NA	14	True	AATAAA	-19	NA	111573669	111608860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
Isoform_7377_14	chr11	-	2134	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-236	5	-205	-5	multi-exon	FALSE	canonical	3	506	junction_2	138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710241	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_73773_119	chr8	+	3820	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-33	609	-33	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	3004	False	NA	NA	False	ATTAAA	-15	NA	111646520	111698503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_73775_25	chr8	+	3849	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-62	609	-62	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	2975	False	NA	NA	False	ATTAAA	-15	NA	111646491	111698503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_73776_8	chr8	+	3922	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-135	609	-135	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	2902	False	NA	NA	False	ATTAAA	-15	NA	111646418	111698503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_73779_10	chr8	+	4425	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-33	4	-33	-4	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAC	3004	False	NA	NA	False	ACTAAA	-26	NA	111646520	111699108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_7378_8	chr11	-	2705	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	10	-812	10	812	multi-exon	FALSE	canonical	3	506	junction_2	138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102709995	102689592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709795
Isoform_73782_3	chr8	+	2357	5	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	42200	609	21218	-609	3prime_fragment	FALSE	canonical	3	87	junction_1	5.93190525885234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	93	False	NA	NA	False	ATTAAA	-15	NA	111688753	111698503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
Isoform_73784_2286	chr8	+	3321	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2097	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760510	111782199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_73789_339	chr8	+	3323	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-1	-2095	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760546	111782201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_73792_2284	chr8	+	3640	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	13	2097	-1	-2097	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760546	111782199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
Isoform_738_3	chr10	-	2130	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	395	1798	0	202	multi-exon	FALSE	canonical	3	77	junction_2	74.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCATAGGTCGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	29238043	29221969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_29223880_29230287_29230444_29237979
Isoform_7383_36	chr11	-	1804	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	35	-1592	4	-5	multi-exon	FALSE	canonical	3	62	junction_2	360	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710001	102690409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709885
Isoform_73834_4	chr8	+	4923	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	16	-1	2	1	multi-exon	TRUE	canonical	3	24	junction_1	8.20878085010087	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGTAGCAA	NA	False	NA	NA	False	AATACA	-32	NA	111821288	111863707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
Isoform_73835_73	chr8	+	2732	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-334	710	-132	95	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTTGTGTCGACTG	NA	False	NA	8	True	AAAAAG	-28	NA	112263139	112349700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
Isoform_73836_3	chr8	+	3331	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-330	107	-128	-107	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCCAAAAAAAAAAAATTACA	NA	False	NA	NA	False	ATTAAA	-2	NA	112263143	112350303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
Isoform_73837_82	chr8	+	1944	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-611	-95	-131	95	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTTGTGTCGACTG	NA	False	NA	8	True	AAAAAG	-28	NA	112263140	112349700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
Isoform_73838_6	chr8	+	2565	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-625	-702	-145	-103	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTACAAAAA	NA	False	NA	NA	False	ATTAAA	-6	NA	112263126	112350307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
Isoform_73839_5	chr8	+	2225	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-129	2355	-129	-103	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTACAAAAA	NA	False	NA	NA	False	ATTAAA	-6	NA	112263142	112350307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
Isoform_73840_14	chr8	+	1586	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-101	2966	-101	91	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAAAGTCTTGTGTCG	NA	False	NA	4	True	AAAAAG	-24	NA	112263170	112349696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
Isoform_73841_4	chr8	+	2601	3	FSM	ENSMUSG00000033545.15	ENSMUST00000173726.8	549	3	-922	-1130	-99	93	multi-exon	FALSE	canonical	1	3	junction_1	51.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTCTTGTGTCGAC	NA	False	NA	6	True	AAAAAG	-26	NA	112263172	112349698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112264197_112345837_112345944_112348227
Isoform_73842_3	chr8	+	4238	2	ISM	ENSMUSG00000055835.11	ENSMUST00000212206.2	1636	5	-38	8251	-38	-8230	5prime_fragment	FALSE	canonical	3	86	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	112370073	112389084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_112370245_112385017
Isoform_73843_6	chr8	+	1874	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-64	1	-38	-1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	12	True	AATAGA	-19	NA	112370073	112397642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
Isoform_73844_9	chr8	+	1547	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-64	328	-38	1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112370073	112397315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
Isoform_73846_7	chr8	+	1802	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	10	-1	10	1	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTTTTTGGCTTTTTG	NA	False	NA	14	True	AATAGA	-21	NA	112370147	112397644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
Isoform_73847_3	chr8	+	1437	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-30	2	1	-2	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112370138	112397312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
Isoform_73849_182	chr8	+	925	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	55	697	0	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667389	112679547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_7385_7	chr11	-	1917	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	30	-1700	-1	103	multi-exon	FALSE	canonical	3	62	junction_2	360	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTTTAAGATCTATCT	NA	False	NA	-5	True	NA	NA	NA	102710006	102690301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102709885
Isoform_73852_6	chr8	+	1238	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	52	387	-3	-387	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTATTGGTGTTT	NA	False	NA	3	True	AATATA	-8	NA	112667386	112679857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_73853_5	chr8	+	1049	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-70	698	-70	172	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGTGTGACCATGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	112667264	112679546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_73854_5	chr8	+	1309	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-19	387	-19	-387	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTATTGGTGTTT	NA	False	NA	3	True	AATATA	-8	NA	112667315	112679857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
Isoform_73856_201	chr8	+	2216	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	16	1328	12	-1328	multi-exon	FALSE	canonical	3	135	junction_1	1.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCATTTTCTTTGATTT	NA	False	NA	NA	False	AATAAA	-26	NA	112738045	112745832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112738775_112741968_112742094_112744470
Isoform_73859_3	chr8	+	3551	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	5	4	1	-4	multi-exon	FALSE	canonical	3	135	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTACTGTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	112738034	112747156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_112738775_112741968_112742094_112744470
Isoform_73862_3	chr8	+	4976	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	3	19	3	-19	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATATGGGGGAACTTAC	NA	False	NA	1	True	AATAAA	-2	NA	114362469	114371792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
Isoform_73864_5	chr8	+	670	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-20	5309	-13	-5309	5prime_fragment	FALSE	canonical	3	123	junction_1	3.39934634239519	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGTTACAGTGTGAG	NA	False	NA	NA	False	ATTAAA	-18	NA	115166421	115175249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
Isoform_73865_4	chr8	+	3790	6	NNC	ENSMUSG00000004637.16	novel	3781	5	NA	NA	8	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	58.2511802455538	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCTTTTGGGAATTAT	NA	False	NA	12	True	AATAAA	-12	NA	115166402	115180564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256_115177461_115177496
Isoform_73868_3	chr8	+	1223	2	FSM	ENSMUSG00000031756.6	ENSMUST00000212578.2	447	2	-14	-762	-14	762	multi-exon	FALSE	canonical	3	221	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	117648454	117650221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117648523_117649066
Isoform_73869_122	chr8	+	1787	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-18	-1	-8	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648460	117668243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
Isoform_7387_14	chr11	-	1879	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	8	3	8	-3	multi-exon	FALSE	canonical	3	30	junction_2	376	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTGTTAAAGGGTAA	NA	False	NA	-11	True	ATTAAA	-19	NA	102710518	102690407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102692022_102693666_102693743_102710329
Isoform_73870_4	chr8	+	2306	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-18	-520	-8	516	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTTTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	117648460	117668762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
Isoform_73875_173	chr8	+	2677	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	2200	0	-2200	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCGCCTATGTTTGCTC	NA	False	NA	13	True	TATAAA	-19	NA	117670131	117684984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
Isoform_73876_108	chr8	+	4877	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670131	117687184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
Isoform_73878_6	chr8	+	4768	5	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.827791101795	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTCTGTGTGAATCTT	NA	False	NA	22	True	ATTAAA	-16	NA	117670154	117687182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_117670162_117670245_117670490_117679612_117679739_117681452_117681653_117682991
Isoform_73881_4	chr8	+	2473	3	NIC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	0	-2204	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	174.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATGTCGCCTATGTTT	NA	False	NA	9	True	TATAAA	-15	NA	117670131	117684980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_117670490_117679612_117679739_117682991
Isoform_73883_14	chr8	+	2804	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	1	-153	-1	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	117884720	117931924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
Isoform_73885_3	chr8	+	2446	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-54	16	-54	-9	multi-exon	TRUE	canonical	3	28	junction_12	7.20052081449669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	117983748	118186153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_73887_36	chr8	+	4337	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-40	1	-40	-1	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTCTGTACCTGATCTG	NA	False	NA	10	True	AATAAA	-22	NA	118224989	118361880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_73889_4	chr8	+	2790	17	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	91316	2	91316	-2	3prime_fragment	FALSE	canonical	3	106	junction_1	28.5097982060554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	6932	False	NA	9	True	AATAAA	-21	NA	118316345	118361879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_73892_8	chr8	+	1899	12	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	102741	3	102741	-3	3prime_fragment	FALSE	canonical	3	117	junction_1	25.4749917882532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGTTCTGTACCTGATC	NA	False	NA	8	True	AATAAA	-20	NA	118327770	118361878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_73895_5	chr8	+	556	5	FSM	ENSMUSG00000031839.8	ENSMUST00000212468.2	638	5	-6	88	0	-88	multi-exon	FALSE	canonical	0	0	junction_2	859.671594273069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGATTGTCAAACGTTT	NA	False	NA	21	True	ATTAAA	-24	NA	120071254	120074994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120073563_120073607_120074774
Isoform_73896_272	chr8	+	524	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	19	665	-9	-86	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTGTCAAACGTTTTA	NA	False	NA	23	True	ATTAAA	-26	NA	120071245	120074996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
Isoform_73897_191	chr8	+	1195	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	19	-6	-9	6	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGGTGTGGTCCTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	120071245	120075667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
Isoform_739_6	chr10	-	1363	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	44	125	-24	-125	multi-exon	FALSE	canonical	3	2101	junction_1	71	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTAAGTTTTCACT	NA	False	NA	-9	True	NA	NA	NA	30076512	30072129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_73900_165	chr8	+	2109	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	2	17	2	-2	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACCTTTAAGTCTACTT	1471	False	NA	2	True	ATTAAA	-15	NA	120121618	120137824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
Isoform_73902_3	chr8	+	1978	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	27	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGAGGAGTCTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	120163883	120172995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
Isoform_73903_14	chr8	+	1643	13	FSM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	333	0	333	0	multi-exon	FALSE	canonical	3	44	junction_3	4.71625439894367	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120173790	120199379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120174004_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
Isoform_73905_4	chr8	+	1927	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	0	-1	0	1	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4281	False	NA	8	True	AATAAA	-13	NA	120339485	120343664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
Isoform_73906_17	chr8	+	2003	10	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-38	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	9.71571210608852	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4243	False	NA	9	True	AATAAA	-14	NA	120339447	120343665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343110_120343269_120343352
Isoform_73907_25	chr8	+	2182	9	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-22	2	intron_retention	FALSE	canonical	3	28	junction_5	5.50993421013355	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4259	False	NA	9	True	AATAAA	-14	NA	120339463	120343665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
Isoform_73909_7	chr8	+	2142	9	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_5	12.8834923448574	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGCGTGTTGGGATG	4283	False	NA	9	True	AATAAA	-14	NA	120339487	120343665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342094_120342247_120342349_120342580_120342671_120343269_120343352
Isoform_73912_5	chr8	+	2392	3	FSM	ENSMUSG00000031828.10	ENSMUST00000212636.2	1354	3	-20	-1018	-20	1018	multi-exon	FALSE	canonical	3	18	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCATGGGCCCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	120588984	120598473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120589187_120591741_120591819_120596360
Isoform_73913_58	chr8	+	2206	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	-31	6	-25	-6	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	120588979	120603728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
Isoform_73914_5	chr8	+	1116	4	NIC	ENSMUSG00000031828.10	novel	2181	5	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	7.03957069398096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTATCTTGTTTGAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	120588998	120603728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_120589187_120591741_120591819_120601113_120601272_120603035
Isoform_73919_1070	chr8	+	3280	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	449	-3	-5	1	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTTTCTTGGTGTG	8822	False	NA	37	True	AATAAA	-19	NA	120637547	120684297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_73934_524	chr8	+	3277	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-5	2	-5	1	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTTTCTTGGTGTG	8822	False	NA	37	True	AATAAA	-19	NA	120637547	120684297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_73935_555	chr8	+	3251	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	19	4	0	1	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8846	False	NA	35	True	AATAAA	-17	NA	120637571	120684295	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
Isoform_73955_3	chr8	+	2885	15	FSM	ENSMUSG00000031825.17	ENSMUST00000132583.8	4182	15	81	1216	11	1	multi-exon	FALSE	canonical	0	0	junction_7	1.49318178288335	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120719257	120778316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120719340_120737172_120737491_120740748_120740868_120742012_120742146_120742404_120742521_120745591_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
Isoform_73956_4	chr8	+	4543	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-47	114	-47	40	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGTGGTTTGGGGAAT	NA	False	NA	0	True	TATAAA	-15	NA	121262548	121306105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_73957_4	chr8	+	4657	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-53	6	-53	-6	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTGTTTGTACTGC	NA	False	NA	NA	False	AAAAAG	-9	NA	121262542	121306213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_73958_11	chr8	+	4523	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	8	-39	8	39	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATGTGGTTTGGGGAA	NA	False	NA	-1	True	TATAAA	-14	NA	121264175	121306104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_73959_7	chr8	+	4611	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	35	-154	35	0	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTACTGCTGCTGG	NA	False	NA	NA	False	AAAAAG	-15	NA	121264202	121306219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
Isoform_73962_5880	chr8	+	677	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	68	0	-18	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	5880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395028	121400946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
Isoform_73964_72	chr8	+	735	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	10	0	10	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394970	121400946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
Isoform_73972_28	chr8	+	2844	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	3	0	-3	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTTTGTTTCTTT	NA	False	NA	15	True	ATTAAA	-19	NA	121463096	121483430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_73976_6	chr8	+	1226	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6907	171	66	6	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTTTCTGTGTG	NA	False	NA	NA	False	ATTAAA	-35	NA	121472284	121482149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_73977_3	chr8	+	1379	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6923	2	82	-2	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAAAACTCTT	NA	False	NA	NA	False	NA	NA	NA	121472300	121482318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_73979_376	chr8	+	1713	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	105	714	-11	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9950	False	NA	16	True	AATAAA	-16	NA	122317204	122324785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
Isoform_7398_1140	chr11	-	3303	28	FSM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	32	4	11	0	multi-exon	FALSE	non_canonical	0	0	junction_26	289.083827865911	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8480	False	NA	-9	True	TATAAA	-18	NA	102771779	102729302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
Isoform_73980_834	chr8	+	678	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	105	1749	-11	-1	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGCCAATAAAAAGATCA	9950	False	NA	-8	True	AATAAA	-18	NA	122317204	122323750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
Isoform_73984_65	chr8	+	2089	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	23	3332	-8	-11	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73985_3	chr8	+	2337	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	24	3083	-7	-2	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGGCTCAGTGTTGT	NA	False	NA	5	True	AATAAA	-13	NA	122677306	122752914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73986_3	chr8	+	2121	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	-9	3332	-9	-11	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677273	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73987_89	chr8	+	2080	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73988_13	chr8	+	2332	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677305	122752917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73989_9	chr8	+	1954	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_73990_31	chr8	+	1972	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-13	11	-8	-11	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73991_3	chr8	+	2228	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-13	-245	-8	5	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGTGTTGTTGCACCG	NA	False	NA	12	True	AATAAA	-20	NA	122677305	122752921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73992_4	chr8	+	1860	12	NIC	ENSMUSG00000025316.17	novel	1970	13	NA	NA	-8	3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	86.2362697180023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	122677305	122752679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_73993_53	chr8	+	1963	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	251	-8	-11	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73994_7	chr8	+	2215	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	75	-1	-8	1	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677305	122752917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_73995_4	chr8	+	1837	12	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	73.218342099741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122677305	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
Isoform_73996_4	chr8	+	2903	4	FSM	ENSMUSG00000017478.16	ENSMUST00000177386.2	2895	4	-7	-1	-2	1	multi-exon	FALSE	canonical	3	64	junction_3	80.3920946915111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAACAATAAT	937	False	NA	NA	False	NA	NA	NA	123103379	123116484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431
Isoform_73998_13	chr8	+	3776	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	35	-1	0	0	multi-exon	FALSE	canonical	3	64	junction_3	72.8266375428831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	940	False	NA	15	True	AATAAA	-16	NA	123103382	123144099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
Isoform_740_74	chr10	-	438	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	12	1082	12	-1082	multi-exon	FALSE	canonical	3	2101	junction_1	71	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTCTGAGTTTCTTTT	NA	False	NA	0	True	ATTAAA	-29	NA	30076544	30073086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_74002_53	chr8	+	3704	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	1	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	940	False	NA	15	True	AATAAA	-16	NA	123103382	123144099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
Isoform_74006_6	chr8	+	1763	14	ISM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	17	1352	17	0	intron_retention	FALSE	canonical	3	114	junction_5	16.680782976529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAACCCTACAGTACTT	8879	False	NA	10	True	AATAAA	-12	NA	123202898	123208479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209
Isoform_74007_73	chr8	+	1701	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	17	1348	17	0	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8879	False	NA	14	True	AATAAA	-16	NA	123202898	123208483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74008_247	chr8	+	1654	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	64	1348	-2	0	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8926	False	NA	14	True	AATAAA	-16	NA	123202945	123208483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74009_4	chr8	+	1677	15	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	37.2460106068079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8876	False	NA	12	True	AATAAA	-14	NA	123202895	123208481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208359
Isoform_7401_179	chr11	-	3312	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	12	0	9	0	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8478	False	NA	-5	True	TATAAA	-22	NA	102771781	102729298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
Isoform_74010_12	chr8	+	1783	14	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	6	1	intron_retention	FALSE	canonical	3	114	junction_5	17.332119514471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8868	False	NA	12	True	AATAAA	-14	NA	123202887	123208481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208269_123208334
Isoform_74011_4	chr8	+	1670	14	ISM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	0	2395	0	0	intron_retention	FALSE	canonical	3	8	junction_11	37.1773297340442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8928	False	NA	13	True	AATAAA	-15	NA	123202947	123208482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209
Isoform_74012_13	chr8	+	1615	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-10	2394	-10	0	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8918	False	NA	14	True	AATAAA	-16	NA	123202937	123208483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74013_9	chr8	+	1733	14	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	114	junction_5	16.978928813934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8926	False	NA	13	True	AATAAA	-15	NA	123202945	123208482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74014_11	chr8	+	1702	15	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-28	1	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	37.5312794716022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTACAGTACTTGT	8900	False	NA	12	True	AATAAA	-14	NA	123202919	123208481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123204000_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74015_6	chr8	+	1830	14	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	114	junction_4	17.1484986490701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8969	False	NA	14	True	AATAAA	-16	NA	123202988	123208483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
Isoform_74018_533	chr8	+	2175	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	21	-7	10	7	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTCACCGTAAAATCTC	2607	False	NA	34	True	AATAAA	-43	NA	123294774	123299874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
Isoform_74020_11	chr8	+	2259	9	FSM	ENSMUSG00000006585.4	ENSMUST00000212967.2	2696	9	12	425	12	1	multi-exon	FALSE	canonical	3	858	junction_2	70.7626976238187	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAACCTGTCACCGTAA	2609	False	NA	28	True	AATAAA	-37	NA	123294776	123299868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
Isoform_74024_71	chr8	+	600	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-12	1071	-6	-1071	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5510	False	NA	24	True	ACTAAA	-16	NA	123338372	123342328	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
Isoform_74025_3	chr8	+	882	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	7	-1069	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5529	False	NA	26	True	ACTAAA	-18	NA	123338391	123342330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
Isoform_74026_30	chr8	+	2208	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	-2	0	2	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCTGTGAGCTGTGAG	9534	False	NA	15	True	AATAAA	-27	NA	123502243	123544621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
Isoform_74027_53	chr8	+	2247	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-73	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTGTGAGCTGTGAGT	9534	False	NA	16	True	AATAAA	-28	NA	123502243	123544622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
Isoform_7403_379	chr11	-	3303	28	NNC	ENSMUSG00000020929.15	novel	3339	28	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	388.40646267398	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8478	False	NA	-9	True	TATAAA	-18	NA	102771781	102729302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756485_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
Isoform_74030_258	chr8	+	2557	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	333	6	4	1	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792250	123824493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_74031_36	chr8	+	2567	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	61.7469318569757	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792237	123824493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800490_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
Isoform_74037_9834	chr8	+	708	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	64	8	64	5	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	9834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAAGCTGGGTTTCTT	NA	False	NA	9	True	AATAAA	-10	NA	123829152	123831975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
Isoform_74038_1841	chr8	+	740	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	32	8	32	5	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAAGCTGGGTTTCTT	NA	False	NA	9	True	AATAAA	-10	NA	123829120	123831975	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
Isoform_74054_4	chr8	+	2319	9	NIC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-66	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.93609219950254	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGCCTTTCTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	123853189	123861922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123853474_123853559_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_74055_9	chr8	+	2418	8	ISM	ENSMUSG00000034796.15	ENSMUST00000134235.8	3018	14	9064	-3	-79	1	3prime_fragment	FALSE	canonical	3	10	junction_1	4.85293935756087	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGCCTTTCTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	123853176	123861922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
Isoform_74056_3	chr8	+	1107	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	3	5	3	-5	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACAACATGGTGGTG	3331	False	NA	-4	True	NA	NA	NA	123899586	123905499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123899783_123904588
Isoform_74057_4	chr8	+	510	3	FSM	ENSMUSG00000048478.8	ENSMUST00000060133.8	491	3	-19	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGATCCTTTCCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	123939603	123948783	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123939737_123939826_123939977_123948556
Isoform_74058_57	chr8	+	1593	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-5	-8	0	8	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCAATCCTTTAATGT	2144	False	NA	18	True	GATAAA	-19	NA	123951599	123958997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_74059_5	chr8	+	1615	13	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	78.6862175564014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2150	False	NA	12	True	GATAAA	-13	NA	123951605	123958991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955674_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_74060_116	chr8	+	1629	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	19	-6	0	6	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGGCAATCCTTTAAT	2144	False	NA	16	True	GATAAA	-17	NA	123951599	123958995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
Isoform_74061_5	chr8	+	2619	2	ISM	ENSMUSG00000001065.16	ENSMUST00000150356.8	2222	4	-33	-3	-33	3	intron_retention	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1677	False	NA	NA	False	NA	NA	NA	123980976	123984378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_123981663_123982445
Isoform_74062_4	chr8	+	2339	3	ISM	ENSMUSG00000001065.16	ENSMUST00000150356.8	2222	4	-26	-3	-26	3	intron_retention	FALSE	canonical	3	18	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1684	False	NA	NA	False	NA	NA	NA	123980983	123984378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_123981663_123982445_123982750_123983022
Isoform_74063_3	chr8	+	4013	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	48	10	-28	-8	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGCTGCCCAGAGT	1682	False	NA	11	True	ATTAAA	-40	NA	123980981	123996474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_74064_13	chr8	+	2665	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	73	1333	-3	290	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTGGTGCGCTGAGA	1707	False	NA	NA	False	AATAAA	-14	NA	123981006	123995151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_74065_4	chr8	+	2609	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	48	1414	-28	209	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAATCAAGGAGATTGGT	1682	False	NA	NA	False	NA	NA	NA	123980981	123995070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
Isoform_74066_249	chr8	+	2335	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-1	-4	-1	4	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTCTCTTTCCCTACA	NA	False	NA	22	True	NA	NA	NA	124059450	124096258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_74068_7	chr8	+	2913	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-22	0	intron_retention	FALSE	canonical	3	49	junction_7	8.53811503108407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	False	NA	18	True	NA	NA	NA	124059429	124096254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_74069_7	chr8	+	2288	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	20.1212302140163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATTGTCTCTTTCCCT	NA	False	NA	19	True	NA	NA	NA	124059450	124096255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124059760_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_74073_11	chr8	+	3108	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-25	1919	7	-1	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAATTGTC	NA	False	NA	NA	False	NA	NA	NA	124100569	124128630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
Isoform_74077_15	chr8	+	2208	18	NIC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	-12	100	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100549	124128070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
Isoform_74078_124	chr8	+	2217	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-40	561	0	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100522	124128070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_74079_180	chr8	+	2170	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	7	561	7	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100569	124128070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_74080_20	chr8	+	2397	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-220	561	-149	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100342	124128070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_74083_38	chr8	+	2672	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-89	-1	-19	1	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100472	124130546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
Isoform_74084_151	chr8	+	2581	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	2	-1	1	1	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100563	124130546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
Isoform_7409_77	chr11	-	2956	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	1	369	1	-369	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGGGGACTCTTGGGC	3725	False	NA	-5	True	ATTAAA	-40	NA	102815949	102796723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
Isoform_74090_132	chr8	+	2578	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	72	-1	1	1	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100563	124130546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_74091_51	chr8	+	2619	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	31	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100522	124130546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_74092_10	chr8	+	2810	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-159	-2	-159	2	multi-exon	TRUE	canonical	3	129	junction_17	98.3685253625717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACATGGTGATATGG	NA	False	NA	10	True	AAGAAA	-15	NA	124100332	124130547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_741_131	chr10	-	394	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	53	1085	-15	-1085	multi-exon	FALSE	canonical	3	2101	junction_1	71	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGCTTCTGAGTTTCT	NA	False	NA	-3	True	ATTAAA	-26	NA	30076503	30073089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_30073223_30074461_30074576_30076356
Isoform_7410_11	chr11	-	1539	2	FSM	ENSMUSG00000045532.6	ENSMUST00000057849.6	1473	2	-58	-8	-58	8	multi-exon	FALSE	canonical	3	27	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGTGCCCTGGGGAA	8601	False	NA	-2	True	AATAAA	-24	NA	102837572	102830081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102830739_102836690
Isoform_74101_11	chr8	+	2257	18	NNC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	-12	99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	146.781550371332	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACCCGTGTCTTTTGTTT	NA	False	NA	22	True	NA	NA	NA	124100479	124128069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118321_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
Isoform_74106_21	chr8	+	2576	18	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	150.265624097686	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAACATGGTGATATG	NA	False	NA	9	True	AAGAAA	-14	NA	124100563	124130546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118321_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
Isoform_74108_75	chr8	+	1734	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	129	5	-37	-5	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCTGGTATTGGAGA	NA	False	NA	22	True	AATAAA	-22	NA	124138291	124148749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
Isoform_74109_13	chr8	+	1878	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	-18	8	-18	-8	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGCCTGGTATTGG	NA	False	NA	19	True	AATAAA	-19	NA	124138144	124148746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
Isoform_74110_4	chr8	+	3230	14	FSM	ENSMUSG00000001482.16	ENSMUST00000108832.8	3242	14	5	7	2	1	multi-exon	FALSE	canonical	3	15	junction_2	108.849605816422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169748	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124169791_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74111_6	chr8	+	3206	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	-1	9	-1	-1	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAAATGTTACTAGTC	NA	False	NA	22	True	TATAAA	-11	NA	124169723	124190000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74112_3	chr8	+	3162	13	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.5811715246523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAAATGTTACTAGTC	NA	False	NA	22	True	TATAAA	-11	NA	124169727	124190000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124169791_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74113_109	chr8	+	3096	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	24	7	2	1	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169748	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74114_4	chr8	+	3215	12	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	82.1393695681788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124169724	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124169791_124174431_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74115_11	chr8	+	3153	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	39	-1	39	1	multi-exon	FALSE	canonical	3	18	junction_1	79.5842502795747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124170085	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74116_10	chr8	+	3179	12	NIC	ENSMUSG00000001482.16	novel	589	4	NA	NA	90	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	80.3485177058087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124173767	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124173893_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74122_115	chr8	+	2994	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-15	1248	-15	1053	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAAACAAACAA	7480	False	NA	NA	False	NA	NA	NA	124204626	124229407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
Isoform_74123_411	chr8	+	2503	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-15	1739	-15	562	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACGTCTCAGATAAGAC	7480	False	NA	15	True	ATTAAA	-18	NA	124204626	124228916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
Isoform_74125_17	chr8	+	1624	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	57	0	35	0	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	False	NA	7	True	AATGAA	-21	NA	124245629	124263389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
Isoform_74126_3	chr8	+	1946	7	FSM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	-59	-807	24	5	multi-exon	FALSE	canonical	0	0	junction_5	143.451211218309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTGTCCTGCTCTGTGC	NA	False	NA	17	True	AATAAA	-26	NA	124532747	124562031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753
Isoform_74127_85	chr8	+	1399	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	25	-5	25	5	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTGTCCTGCTCTGTGC	NA	False	NA	17	True	AATAAA	-26	NA	124532748	124562031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_74129_4	chr8	+	1169	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	-4	254	-4	219	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCGTGCTTTTCTCATT	NA	False	NA	NA	False	TTTAAA	-29	NA	124532719	124561772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_7413_257	chr11	-	1702	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	44	-2	44	2	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCCACTTGGCCTTT	8237	False	NA	-3	True	NA	NA	NA	102907950	102884870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
Isoform_74130_7	chr8	+	1360	8	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	25	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.435483721121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	16	True	AATAAA	-25	NA	124532748	124562030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
Isoform_74131_5	chr8	+	5511	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-11	-586	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGGAAAATTCCTGA	NA	False	NA	12	True	AATAAA	-24	NA	124748235	124774657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_74132_4	chr8	+	6106	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-25	-5	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACATAGTATTCTGCT	NA	False	NA	15	True	AATAAA	-19	NA	124748221	124775238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
Isoform_74133_66	chr8	+	4059	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	53	1	53	-1	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCGCCGCTGTCAGTC	8618	False	NA	31	True	AATAAA	-21	NA	124958182	125072460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
Isoform_74137_10	chr8	+	2676	11	ISM	ENSMUSG00000031979.18	ENSMUST00000108803.8	2101	13	62	1389	48	-8	intron_retention	FALSE	canonical	3	176	junction_7	27.7562605550532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATATTAGAAATAAAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	125247605	125271124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627
Isoform_74139_212	chr8	+	2769	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	54	2	2	-2	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGAGTTATGTATCC	NA	False	NA	27	True	AATAAA	-17	NA	125247559	125278745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_7414_209	chr11	-	1745	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8192	False	NA	-5	True	NA	NA	NA	102907995	102884872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
Isoform_74141_6	chr8	+	2654	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	2	14	junction_11	58.0769963066273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGAGTTATGTATCC	NA	False	NA	27	True	AATAAA	-17	NA	125247522	125278745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
Isoform_74144_28	chr8	+	2993	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	30	7	10	-7	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTAACTAAGGTTGTC	NA	False	NA	14	True	AATAAA	-23	NA	125448907	125460855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
Isoform_74146_9	chr8	+	1122	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	30	13	10	-13	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTCAGTAACTAAG	NA	False	NA	8	True	AATAAA	-17	NA	125448907	125460849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
Isoform_74147_5	chr8	+	1160	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	37.0113496106262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACTAAGGTTGTCT	NA	False	NA	15	True	AATAAA	-24	NA	125448899	125460856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460522
Isoform_74148_4	chr8	+	2934	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	10	-19	intron_retention	FALSE	canonical	3	31	junction_3	30.6634962129239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTCCAGTTCAGTA	NA	False	NA	2	True	AATAAA	-11	NA	125448907	125460843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457577_125457756_125458535
Isoform_74149_6	chr8	+	2930	5	ISM	ENSMUSG00000031982.6	ENSMUST00000212036.2	891	6	-6	-168	-6	1	intron_retention	FALSE	canonical	3	24	junction_2	38.9767558937375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGTTGTCTTTTGAAT	NA	False	NA	22	True	AATAAA	-31	NA	125448891	125460863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_125449082_125451994_125452115_125455107_125455222_125457577_125457756_125458535
Isoform_74150_17	chr8	+	2916	16	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	158.602984419167	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATACCCAATGGTCT	5151	False	NA	27	True	AATAAA	-18	NA	125589802	125616789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_125590052_125597514_125597698_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
Isoform_74154_684	chr8	+	2953	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	31	0	-8	0	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5151	False	NA	34	True	AATAAA	-25	NA	125589802	125616796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
Isoform_74157_13	chr8	+	3002	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	31	-49	-8	49	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATGCCTGTGCGATGT	5151	False	NA	83	True	ACTAAA	-17	NA	125589802	125616845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
Isoform_74165_78	chr8	+	4459	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	3	2	3	-2	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTTGATGTGTCTTTC	NA	False	NA	7	True	AATAAA	-16	NA	125624627	125632898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
Isoform_74168_7	chr8	+	4323	4	NIC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.7786652353933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGGTTGATGTGTCTT	NA	False	NA	5	True	AATAAA	-14	NA	125624632	125632896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_125625121_125625814_125625915_125628363_125628632_125629429
Isoform_74169_6	chr8	+	2128	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	27	14	27	-14	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAACCAAAAAA	5273	False	NA	NA	False	NA	NA	NA	125739814	125757146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
Isoform_74170_83	chr8	+	2349	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	45	-3	-7	3	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5239	False	NA	12	True	AATAAA	-17	NA	125739780	125760934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
Isoform_74171_130	chr8	+	2325	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	69	-3	17	3	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5263	False	NA	12	True	AATAAA	-17	NA	125739804	125760934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
Isoform_74173_24	chr8	+	2423	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	-39	7	-39	-7	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACAGCAGCCCTCTGGT	5155	False	NA	2	True	AATAAA	-7	NA	125739696	125760924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
Isoform_74175_22	chr8	+	1125	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	30	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460971	126474974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
Isoform_74177_6	chr8	+	1058	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	49	-8	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAGACACAGGAGTCCT	NA	False	NA	15	True	AATAAA	-23	NA	126461025	126474966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
Isoform_74178_5	chr8	+	997	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	-5	73	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAACTGGTTCTCTTC	NA	False	NA	27	True	ATTAAA	-42	NA	126460966	126474846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
Isoform_74179_6	chr8	+	1079	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGGAGTCCTTGTGTG	NA	False	NA	21	True	AATAAA	-29	NA	126461010	126474972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
Isoform_74181_34	chr8	+	2244	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	-10	1	-10	-1	multi-exon	FALSE	canonical	3	118	junction_2	9	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGTTTATTACAAC	NA	False	NA	20	True	AATAAA	-17	NA	126721898	126757423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_126722554_126751750_126752147_126756230
Isoform_74183_44	chr8	+	2122	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	112	1	112	-1	multi-exon	FALSE	canonical	3	118	junction_2	9	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGTTTATTACAAC	NA	False	NA	20	True	AATAAA	-17	NA	126722020	126757423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_126722554_126751750_126752147_126756230
Isoform_74188_3	chr8	+	1461	4	FSM	ENSMUSG00000033998.10	ENSMUST00000212831.2	1309	4	-154	2	112	-2	multi-exon	FALSE	canonical	3	7	junction_3	57.0438427878066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGGTTTATTAC	NA	False	NA	17	True	AATAAA	-14	NA	126722020	126757420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_126722554_126751750_126752147_126756230_126756432_126757089
Isoform_74189_43	chr8	+	638	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	13	96	0	-8	multi-exon	FALSE	canonical	3	239	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTGTTTATTTTC	NA	False	NA	-89	True	TATAAA	-13	NA	127149266	127152076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_127149570_127151741
Isoform_7419_89	chr11	-	2984	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	23	16	-17	-16	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9432	False	NA	NA	False	NA	NA	NA	102992461	102961145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_74190_29	chr8	+	768	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-19	-2	-19	2	multi-exon	FALSE	canonical	3	239	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTTCTGGCAGT	NA	False	NA	9	True	AATAAA	-20	NA	127149234	127152174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_127149570_127151741
Isoform_74192_3	chr8	+	1049	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-19	-283	-19	283	multi-exon	FALSE	canonical	3	239	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATTAAAAAACAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	127149234	127152455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_127149570_127151741
Isoform_74193_9	chr8	+	4135	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	30	517	2	1	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	127790849	128128541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_74194_3	chr8	+	4182	14	FSM	ENSMUSG00000025812.19	ENSMUST00000160717.8	4214	14	29	3	2	-3	multi-exon	FALSE	canonical	3	35	junction_1	34.055645380003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTTTGTATGTAT	NA	False	NA	NA	False	AATAAA	-10	NA	128026094	128129055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_74195_5	chr8	+	3670	14	FSM	ENSMUSG00000025812.19	ENSMUST00000160717.8	4214	14	26	518	-1	0	multi-exon	FALSE	canonical	3	35	junction_1	34.055645380003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	128026091	128128540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
Isoform_74196_3	chr8	+	3201	19	FSM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	-2	5	-2	-2	multi-exon	FALSE	canonical	3	22	junction_18	40.1787671952903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	128026090	128159620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
Isoform_74197_4	chr8	+	3165	18	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	42.4209421415877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGTTGACGAGTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	128026089	128159628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
Isoform_74198_5	chr8	+	1893	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-21	-1126	-21	4	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAGAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-23	NA	128306183	128338455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
Isoform_742_31	chr10	-	1798	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	67	494	-5	-4	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGTGATACTCAGT	NA	False	NA	-6	True	AATAAA	-19	NA	30476678	30410714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
Isoform_7420_3	chr11	-	3786	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	0	-763	0	763	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAAAAAGATTGG	9409	False	NA	NA	False	NA	NA	NA	102992484	102960366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_74201_99	chr8	+	3705	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	104	6	1	-6	multi-exon	FALSE	canonical	3	487	junction_6	37.7685348169905	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGATTTGTTTTGGCTC	NA	False	NA	10	True	AATAAA	-16	NA	129412238	129459675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
Isoform_74202_8	chr8	+	3848	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	-39	6	-39	-6	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGATTTGTTTTGGCTC	NA	False	NA	10	True	AATAAA	-16	NA	129412095	129459675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
Isoform_74205_3	chr8	+	426	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-48	756	-48	-756	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGCAAACTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	129990073	130008569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
Isoform_74208_9	chr8	+	656	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	107	24408	107	-14798	5prime_fragment	FALSE	canonical	3	882	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTAAAACAATGAAACAG	NA	False	NA	NA	False	AATGAA	-22	NA	20016572	20031090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_20016689_20030550
Isoform_7421_4	chr11	-	2841	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	3810	-16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	7.81449464332866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9002	False	NA	NA	False	NA	NA	NA	102988607	102961145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102988494
Isoform_74210_5	chr8	+	2866	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-85	-2193	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCGTACACTCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	19834676	20043695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_74213_9	chr8	+	4218	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	100	10384	100	-774	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAATATAAATAGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	20016565	20045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_74218_9	chr8	+	2245	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-2742	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTTTATGAGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	19834748	20043146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
Isoform_7422_3	chr11	-	3149	14	NIC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	5	-16	intron_retention	FALSE	canonical	2	10	junction_13	6.71393499200901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTAAAGAAAA	9414	False	NA	NA	False	NA	NA	NA	102992479	102961145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
Isoform_74228_4	chr8	+	1357	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-116	283	multi-exon	FALSE	canonical	3	112	junction_3	241.687125570781	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATGTGGGCATTCAAA	NA	False	NA	NA	False	AATAAA	-7	NA	20697868	20727549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717493_20727081
Isoform_7423_4	chr11	-	340	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9065	1	9039	-1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTGCGCCTAGTGGG	NA	False	NA	NA	False	AGTAAA	-16	NA	103090309	103089770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103089945_103090143
Isoform_74231_9	chr8	+	1162	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	333	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	428.699413925422	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCATTCAACGTTAGG	NA	False	NA	NA	False	AATAAA	-13	NA	20016486	20046221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732_20045923_20045952
Isoform_74233_14	chr8	+	4051	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	100	-774	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAATATAAATAGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	20016565	20045114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
Isoform_74235_12	chr8	+	4635	5	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-13	-225	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGTAAAATAAAAG	NA	False	NA	NA	False	AATGAA	-23	NA	20697971	20727041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
Isoform_74239_25	chr8	+	3325	24	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81303	-4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	35.9048311486207	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118306332	118361877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
Isoform_7424_8	chr11	-	2721	8	ISM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	36847	2	-8778	-2	3prime_fragment	FALSE	canonical	1	3	junction_4	2.18529407725405	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTGTTTGTAGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	103121451	103110589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157
Isoform_74240_10	chr8	+	1386	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5974	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	77.3801492632316	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTCCTCAAAGATCTC	696	False	NA	6	True	NA	NA	NA	70611404	70620139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_74241_5	chr8	+	1481	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5878	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	77.3801492632316	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	600	False	NA	5	True	NA	NA	NA	70611308	70620138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
Isoform_74242_5	chr8	+	1503	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5887	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	79.2668554630496	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTCCTCAAAGATCTC	609	False	NA	6	True	NA	NA	NA	70611317	70620139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
Isoform_74244_10	chr8	+	1982	17	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	137.596202141447	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85416049	85426414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_85416075_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
Isoform_74245_3	chr8	+	3259	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-163	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.6959208308606	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021362	72039947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72021436_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_74246_6	chr8	+	2495	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-163	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.4179011754225	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72021362	72039351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72021436_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_74247_3	chr8	+	3087	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-159	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.4179011754225	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021366	72039947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72021436_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_74249_5	chr8	+	2138	5	NNC	ENSMUSG00000056608.15	novel	2279	5	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	2.27760839478607	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAGAGGAAAAAATATG	4137	False	NA	4	True	TATAAA	-45	NA	91635203	91703568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548
Isoform_7425_3	chr11	-	2134	5	ISM	ENSMUSG00000034255.19	ENSMUST00000041385.14	3512	16	10591	-2	-1	0	intron_retention	FALSE	canonical	3	10	junction_3	4.49305018890286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	NA	False	NA	-1	True	NA	NA	NA	103224937	103222323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665
Isoform_74252_8	chr8	+	2166	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8574	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1166242552912	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTCTCTTTCCCTAC	1280	False	NA	21	True	NA	NA	NA	124068415	124096257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_74253_6	chr8	+	2195	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8601	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1166242552912	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCTTTCCCTACAG	1253	False	NA	23	True	NA	NA	NA	124068388	124096259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
Isoform_74254_5	chr8	+	698	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21097	-7342	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAACAA	5292	False	NA	NA	False	NA	NA	NA	20555602	20576995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_20555835_20576529
Isoform_74257_3	chr8	+	2568	15	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-1768	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.3906811560971	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	122674720	122752665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_122675147_122676524_122676660_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
Isoform_74258_14	chr8	+	2493	21	NNC	ENSMUSG00000034112.10	novel	3222	27	NA	NA	33708	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.80133896556629	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATCTCTCTCTCTGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	120460516	120484456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_120460562_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713_120482856_120484106
Isoform_7426_15	chr11	-	2080	6	ISM	ENSMUSG00000034255.19	ENSMUST00000041385.14	3512	16	10573	-2	-19	0	3prime_fragment	FALSE	canonical	3	10	junction_3	4.44522215417857	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	NA	False	NA	-1	True	NA	NA	NA	103224955	103222323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836
Isoform_74264_9	chr8	+	920	3	NNC	ENSMUSG00000031585.14	novel	1634	8	NA	NA	-252	-3	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	654.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAATGTTAATGCTTT	NA	False	NA	6	True	AATAAA	-10	NA	34254777	34267189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_34254873_34265971_34266088_34266480
Isoform_74266_5	chr8	+	2647	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-147	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.2843995025628	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72023151	72039350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_72023210_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
Isoform_74267_9	chr8	+	2692	8	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	7097	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	102.321422338569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTTACTAGTCTG	NA	False	NA	24	True	TATAAA	-13	NA	124181017	124190002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_124181171_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
Isoform_74269_3	chr8	+	2046	2	Intergenic	novelGene_1929	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	73302266	73304912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_73303176_73303775
Isoform_7427_4	chr11	-	3440	16	NIC	ENSMUSG00000034255.19	novel	4261	18	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.57215298505783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGAATGTACTCTGG	NA	False	NA	0	True	NA	NA	NA	103247208	103222322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103247090
Isoform_74271_3	chr8	+	2470	7	NNC	ENSMUSG00000041515.11	novel	764	4	NA	NA	-674	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	15.0489940601431	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTTTGTTTCTTT	NA	False	NA	15	True	ATTAAA	-19	NA	121471544	121483430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_121471582_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
Isoform_74272_7	chr8	+	1588	5	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	139	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	92.3102784092866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820387	75827218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_75820558_75822483_75822605_75823477_75823970_75825393_75825494_75826513
Isoform_74274_3	chr8	+	748	3	NNC	ENSMUSG00000110058.2	novel	514	3	NA	NA	-4652	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCTTGTCTGGTAATT	NA	False	NA	NA	False	AATAAA	-13	NA	14044287	14053558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_14044585_14052843_14053014_14053277
Isoform_74275_4	chr8	+	2096	21	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-5720	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4737744443579	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118070188	118186153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_118070231_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_74276_3	chr8	+	2255	21	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-5879	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4737744443579	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118070029	118186153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_118070231_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
Isoform_74277_3	chr8	+	3676	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	5381	-1	intron_retention	FALSE	canonical	1	4	junction_1	37.6161561913438	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTCTGGAAATGTCGT	NA	False	NA	30	True	ATTAAA	-15	NA	79241584	79460630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_79241975_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
Isoform_7428_5	chr11	-	4234	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	25	2	25	-1	multi-exon	FALSE	canonical	2	3	junction_6	4.84999910819383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGCGAATGTACTCT	8199	False	NA	-2	True	NA	NA	NA	103254208	103222324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
Isoform_74280_4	chr8	+	3716	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8606	-571	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	27.4709031346103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACCGAGCTGGTTGACT	NA	False	NA	44	True	AATAAA	-45	NA	107401093	107577500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_107401160_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
Isoform_74282_3	chr8	+	713	2	Antisense	novelGene_ENSMUSG00000089179.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGGCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	91787371	91788705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_+_91787736_91788356
Isoform_74285_4	chr8	+	778	3	NNC	ENSMUSG00000034361.11	novel	2342	16	NA	NA	5720	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGGCTTTTTCTAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	95294997	95297014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_95295123_95295218_95295456_95296598
Isoform_74288_11	chr8	-	2962	4	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	5	1	intron_retention	FALSE	canonical	2	6	junction_1	61.937244225282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCAGCCTCTGCTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	71834599	71826769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71828147_71828392_71828918_71831032_71831128_71833634
Isoform_7429_4	chr11	-	4343	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	-82	0	-25	0	multi-exon	FALSE	canonical	2	3	junction_6	4.84999910819383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGAATGTACTCTGG	8092	False	NA	0	True	NA	NA	NA	103254315	103222322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
Isoform_74293_10	chr8	-	2355	1	NIC	ENSMUSG00000004383.19	novel	4647	15	NA	NA	23	-306099	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74080145	74077790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_74077800_74080100
Isoform_74294_4	chr8	-	2422	1	Genic_Genomic	ENSMUSG00000004383.19	novel	NA	NA	NA	NA	-48	-306103	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74080216	74077794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_74077800_74080200
Isoform_74298_6	chr8	+	849	1	Intergenic	novelGene_1888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	11694665	11695514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_11694700_11695500
Isoform_743_4	chr10	-	1726	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGTGATACTCAGT	NA	False	NA	-6	True	AATAAA	-19	NA	30476688	30410714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
Isoform_74300_3	chr8	-	1334	1	FSM	ENSMUSG00000101431.2	ENSMUST00000120430.2	1597	1	401	-138	401	138	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTCAGGT	NA	False	NA	NA	False	AGTAAA	-14	NA	76439423	76438089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_76438100_76439400
Isoform_74303_3	chr8	-	3432	1	NIC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	25	-263578	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAAATAAAATG	NA	False	NA	NA	False	NA	NA	NA	78244557	78241125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_78241100_78244600
Isoform_74306_5	chr8	+	364	1	Genic_Genomic	ENSMUSG00000071064.16	novel	NA	NA	NA	NA	-362	-43399	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	4684	False	NA	NA	False	NA	NA	NA	79754703	79755067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_79754700_79755100
Isoform_74308_13	chr8	-	173	1	Intergenic	novelGene_1930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79940755	79940582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_79940600_79940800
Isoform_74309_3	chr8	-	4295	1	NIC	ENSMUSG00000031681.17	novel	3099	7	NA	NA	129	-39739	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	80126018	80121723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_80121700_80126000
Isoform_74310_19	chr8	+	210	1	Intergenic	novelGene_1931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	80334432	80334642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_80334400_80334600
Isoform_74316_6	chr8	+	426	1	Intergenic	novelGene_1933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81586032	81586458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_81586000_81586500
Isoform_74317_3	chr8	-	175	1	Intergenic	novelGene_1934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAACAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	83790456	83790281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_83790300_83790500
Isoform_74318_3	chr8	+	1651	1	NIC	ENSMUSG00000031709.16	novel	4631	18	NA	NA	-251	-103691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	83892237	83893888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_83892200_83893900
Isoform_74319_6	chr8	-	2132	1	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-6	-18971	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	AATAGA	-3	NA	84321100	84318968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84319000_84321100
Isoform_7432_36	chr11	-	5145	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	9	814	9	-814	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303504	103255914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_74320_5	chr8	-	616	1	NIC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	0	-7034	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGCTAA	NA	False	NA	NA	False	AAAACA	-9	NA	84467812	84467196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84467200_84467800
Isoform_74322_5	chr8	+	171	1	Intergenic	novelGene_1889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	12469571	12469742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_12469600_12469700
Isoform_74323_5	chr8	-	1660	1	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGCCTTGGTGCTTCTT	4108	False	NA	NA	False	ATTAAA	-15	NA	84811521	84809861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_-_84809900_84811500
Isoform_74324_5	chr8	-	1962	1	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-1	-4226	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	84996997	84995035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_84995000_84997000
Isoform_74327_2452	chr8	-	1516	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	2	6	2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCGCGGCTTGTCTGGC	NA	False	NA	-7	True	AATAAA	-14	NA	85389481	85387965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85388000_85389500
Isoform_7434_3	chr11	-	5974	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-8	2	-8	-2	multi-exon	TRUE	canonical	3	46	junction_6	16.0020659823186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTTGTGTTTAGTGTCT	NA	False	NA	-4	True	AATAAA	-15	NA	103303521	103255102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_74342_7	chr8	+	3195	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	744	-22	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATATATATATGTTAT	3418	False	NA	NA	False	NA	NA	NA	85558894	85562089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85558900_85562100
Isoform_74343_10	chr8	+	2192	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	760	-1009	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCCCTCAAGTTGTGA	3434	False	NA	34	True	AATAAA	-29	NA	85558910	85561102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85558900_85561100
Isoform_74345_10	chr8	+	176	1	Intergenic	novelGene_1937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACACTGA	NA	False	NA	NA	False	NA	NA	NA	85616782	85616958	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_85616800_85617000
Isoform_74346_3	chr8	-	2391	1	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	146	-444	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAACTCTCAAAC	NA	False	NA	NA	False	NA	NA	NA	85620400	85618009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_85618000_85620400
Isoform_7435_15	chr11	-	3146	7	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-4	11863	-4	-9521	5prime_fragment	FALSE	canonical	3	46	junction_1	16.3647656737136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCACTGTATTGGACAA	NA	False	NA	NA	False	NA	NA	NA	103303517	103266963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
Isoform_74350_87	chr8	-	1806	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTGGTCTCTTTTTT	NA	False	NA	-2	True	AGTAAA	-20	NA	85705345	85703539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_85703500_85705300
Isoform_74353_10	chr8	-	2078	1	Antisense	novelGene_ENSMUSG00000052566.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	85717525	85715447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_-_85715400_85717500
Isoform_74354_18	chr8	+	176	1	Intergenic	novelGene_1938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTAATCCCAA	281	False	NA	NA	False	NA	NA	NA	85731100	85731276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_85731100_85731300
Isoform_74355_7	chr8	+	3424	1	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	40	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753491	85756915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85753500_85756900
Isoform_74356_4	chr8	+	1802	1	ISM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	18863	1	5570	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACTTGGTGTCTCATT	NA	False	NA	13	True	AGTAAA	-15	NA	85782406	85784208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_85782400_85784200
Isoform_74357_8	chr8	-	616	1	Antisense	novelGene_ENSMUSG00000060038.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	85798742	85798126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_-_85798100_85798700
Isoform_74358_3	chr8	+	905	1	NIC	ENSMUSG00000060038.15	novel	1333	9	NA	NA	0	-201	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	85798385	85799290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_85798400_85799300
Isoform_74359_3	chr8	+	179	1	Intergenic	novelGene_1939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85839212	85839391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_85839200_85839400
Isoform_74361_11	chr8	-	275	1	Genic_Genomic	ENSMUSG00000031652.12	novel	NA	NA	NA	NA	2636	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGGTGGTGCTTTCTT	NA	False	NA	-4	True	NA	NA	NA	87568037	87567762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_87567800_87568000
Isoform_74362_7	chr8	-	4836	1	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	14	-36090	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGGAACA	NA	False	NA	NA	False	NA	NA	NA	87611872	87607036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_87607000_87611900
Isoform_74363_2318	chr8	+	521	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	5	12	5	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	2318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	NA	False	NA	25	True	AATAAA	-14	NA	87774321	87774842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_87774300_87774800
Isoform_74368_16	chr13	-	200	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATAGTATATATT	NA	False	NA	NA	False	NA	NA	NA	55538212	55538012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_55538000_55538200
Isoform_74369_5	chr8	-	188	1	Intergenic	novelGene_1940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAATTAAGCACA	1928	False	NA	NA	False	NA	NA	NA	89013751	89013563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_89013600_89013800
Isoform_7437_95	chr11	-	3056	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	205	5	1	-5	multi-exon	TRUE	canonical	3	264	junction_1	54.6867442804927	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588519	103567679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_74371_7	chr2	-	178	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTGTATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38387492	38387314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_38387300_38387500
Isoform_74372_8	chr8	-	175	1	Intergenic	novelGene_1943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTATAATGAA	NA	False	NA	NA	False	NA	NA	NA	91554537	91554362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_91554400_91554500
Isoform_74373_5	chr8	-	1841	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	43	1	42	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTTTTTCTATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	91635001	91633160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_91633200_91635000
Isoform_74374_3	chr8	-	185	1	Intergenic	novelGene_1944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAACTACTACAAATGTA	NA	False	NA	NA	False	NA	NA	NA	91692178	91691993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_91692000_91692200
Isoform_74375_6	chr19	-	177	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTCCTGC	NA	False	NA	NA	False	NA	NA	NA	29934197	29934020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_-_29934000_29934200
Isoform_74376_4	chr8	-	287	1	Intergenic	novelGene_1945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	94160315	94160028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_94160000_94160300
Isoform_74377_9	chr8	+	2549	1	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	102	-12073	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8304	False	NA	NA	False	NA	NA	NA	13209262	13211811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13209300_13211800
Isoform_74380_3	chr8	+	4109	1	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-7	1887	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94763858	94767967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_94763900_94768000
Isoform_74389_3	chr8	-	177	1	Intergenic	novelGene_1946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	6225	False	NA	NA	False	NA	NA	NA	94911823	94911646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_94911600_94911800
Isoform_7439_4	chr11	-	3214	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	46	6	46	-6	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCACTTGGCATTCT	NA	False	NA	-4	True	AATAAA	-25	NA	103588678	103567680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_74390_5	chr8	-	2523	1	Intergenic	novelGene_1890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	AATAAA	-13	NA	13233011	13230488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_13230500_13233000
Isoform_74391_3	chr8	+	2766	1	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	0	-3049	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTC	NA	False	NA	NA	False	AATAAA	-27	NA	95113122	95115888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_95113100_95115900
Isoform_74393_8	chr8	+	1051	1	FSM	ENSMUSG00000099338.2	ENSMUST00000190461.2	1039	1	-14	2	10	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGGTGCCTCCATCT	NA	False	NA	NA	False	NA	NA	NA	13250737	13251788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_13250700_13251800
Isoform_74394_4	chr8	-	4297	1	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	-16	-7666	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96161440	96157143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_96157100_96161400
Isoform_74395_3	chr8	-	279	1	Intergenic	novelGene_1891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAATAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	13268620	13268341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_13268300_13268600
Isoform_74396_17	chr8	+	226	1	Intergenic	novelGene_1948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96325210	96325436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_96325200_96325400
Isoform_74397_8	chrX	+	176	1	Intergenic	novelGene_2171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74928044	74928220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_74928000_74928200
Isoform_74398_3	chr8	+	2877	1	FSM	ENSMUSG00000074136.10	ENSMUST00000098472.2	3229	1	-259	611	-30	-611	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-25	NA	96533341	96536218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_96533300_96536200
Isoform_744_7	chr10	-	2643	6	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	58	53709	4	2021	5prime_fragment	FALSE	canonical	3	159	junction_3	17.7696370249929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	30476687	30463929	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
Isoform_74404_13	chr8	-	2069	1	FSM	ENSMUSG00000031672.9	ENSMUST00000212861.2	2057	1	-9	-3	-9	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	96615029	96612960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_96613000_96615000
Isoform_74408_318	chr8	+	1654	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	-65	-44	-65	44	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	100757124	100758778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_100757100_100758800
Isoform_74416_3	chr8	-	511	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	-75	518	-75	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCAGTGGCACCATT	NA	False	NA	NA	False	NA	NA	NA	103592505	103591994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_103592000_103592500
Isoform_74417_4	chr8	-	2978	1	NIC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	11	-3618	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3345	False	NA	NA	False	NA	NA	NA	105261257	105258279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_105258300_105261300
Isoform_74418_7	chr8	-	3508	1	FSM	ENSMUSG00000109617.2	ENSMUST00000210184.2	1603	1	-1770	-135	-1770	135	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTACTC	NA	False	NA	NA	False	AGTAAA	-16	NA	13799248	13795740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_13795700_13799200
Isoform_7442_3	chr11	-	3292	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	-42	16	-42	-16	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACTTTAAAGAAGCAC	NA	False	NA	-14	True	AATAAA	-15	NA	103588766	103567690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_74420_4	chr8	-	2542	1	NIC	ENSMUSG00000041679.10	novel	2000	5	NA	NA	-7	-11377	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	6339	False	NA	NA	False	TTTAAA	-29	NA	106052898	106050356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_106050400_106052900
Isoform_74421_4	chr8	-	210	1	Intergenic	novelGene_1949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAATTCTA	NA	False	NA	NA	False	NA	NA	NA	106376229	106376019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_106376000_106376200
Isoform_74423_4	chr8	-	185	1	ISM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	44430	196	44362	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGGACTG	NA	False	NA	NA	False	NA	NA	NA	106440866	106440681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_106440700_106440900
Isoform_74424_3	chr8	+	170	1	Intergenic	novelGene_1950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGGATGTACTT	NA	False	NA	8	True	NA	NA	NA	106486336	106486506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_106486300_106486500
Isoform_74425_26	chr8	+	182	1	Intergenic	novelGene_1951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGTCAACTG	NA	False	NA	NA	False	NA	NA	NA	106530967	106531149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_106531000_106531100
Isoform_74426_5	chr8	+	2100	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	-282	1	-282	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGGTTTCGACTTTTT	NA	False	NA	11	True	ATTAAA	-18	NA	106581481	106583581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106581500_106583600
Isoform_74427_456	chr8	+	1809	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTCGACTTTTTTT	NA	False	NA	13	True	ATTAAA	-20	NA	106581774	106583583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_106581800_106583600
Isoform_7443_6	chr11	-	2991	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	5	-2079	1	-5	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588519	103567679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
Isoform_74430_4	chr19	-	513	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	365	23	365	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53577134	53576621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr19_-_53576600_53577100
Isoform_74432_13	chr8	+	2989	1	NIC	ENSMUSG00000047710.9	novel	4013	2	NA	NA	-22	-8969	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13919681	13922670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_13919700_13922700
Isoform_74433_131	chr8	-	1813	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	449	0	449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTCATGATTTCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	106738065	106736252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_106736300_106738100
Isoform_74434_3	chr8	-	235	1	Intergenic	novelGene_1953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAAAAAGAAAGAATAAT	8953	False	NA	NA	False	NA	NA	NA	106884642	106884407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_106884400_106884600
Isoform_74435_3	chr8	-	347	1	Intergenic	novelGene_1954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	514	False	NA	NA	False	NA	NA	NA	106935075	106934728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_106934700_106935100
Isoform_74436_3	chr8	-	328	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	56	-42	56	42	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	107299926	107299598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107299600_107299900
Isoform_74437_34	chr8	-	456	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	-109	-5	-109	5	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAAGTTGGCCA	NA	False	NA	NA	False	ACTAAA	-2	NA	107300091	107299635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_107299600_107300100
Isoform_7444_32	chr11	-	2929	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-13	-1872	-9	-5	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588533	103567679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
Isoform_74444_4	chr8	+	174	1	Intergenic	novelGene_1956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	107661476	107661650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_107661500_107661600
Isoform_74445_4	chr19	+	204	2	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTGAGTAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	45918790	45923066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_+_45918977_45923048
Isoform_74446_8	chr8	+	840	1	Antisense	novelGene_ENSMUSG00000078931.5_AS_novelGene_ENSMUSG00000031916.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCTGATGTTCACGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	107774862	107775702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_+_107774900_107775700
Isoform_74448_3	chr8	-	1242	1	Intergenic	novelGene_1958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATGAATAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107836100	107834858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_107834900_107836100
Isoform_74449_7	chr8	-	167	1	Intergenic	novelGene_1959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	107898078	107897911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_107897900_107898100
Isoform_74451_4	chr8	+	180	1	Intergenic	novelGene_1960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAACACACCCCCATT	NA	False	NA	3	True	NA	NA	NA	108122390	108122570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_108122400_108122600
Isoform_74452_4	chr8	+	200	1	Intergenic	novelGene_1961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	108126717	108126917	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_108126700_108126900
Isoform_74455_68	chr8	-	428	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	2	19	2	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	108166209	108165781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_108165800_108166200
Isoform_74457_3	chr8	-	186	1	Intergenic	novelGene_1962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAAGCCATGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	108291294	108291108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_108291100_108291300
Isoform_74462_5	chr8	+	248	1	Intergenic	novelGene_1964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGACCCATCTTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	108317904	108318152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_108317900_108318200
Isoform_74463_3	chr8	-	2995	2	Intergenic	novelGene_1965	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAACAAATAAATAGACAA	NA	False	NA	NA	False	NA	NA	NA	108408867	108405848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_108408364_108408387
Isoform_74465_112	chr8	-	1101	1	FSM	ENSMUSG00000110528.2	ENSMUST00000211890.2	174	1	-44	-883	-44	883	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110067540	110066439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_110066400_110067500
Isoform_74467_5	chr8	-	342	1	Intergenic	novelGene_1966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTGGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	110316750	110316408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_110316400_110316800
Isoform_74468_3	chr8	-	1068	1	Intergenic	novelGene_1893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	14064646	14063578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_14063600_14064600
Isoform_74469_3	chr8	-	2909	1	NIC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	3	-1312	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	110464368	110461459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_110461500_110464400
Isoform_74471_22	chr8	-	175	1	Intergenic	novelGene_1967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111211431	111211256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_111211300_111211400
Isoform_74472_5	chr8	-	582	1	Intergenic	novelGene_1968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAACCCAAAAAA	9345	False	NA	NA	False	NA	NA	NA	111248793	111248211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_111248200_111248800
Isoform_74473_5	chr8	+	183	1	Intergenic	novelGene_1969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111489875	111490058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_111489900_111490100
Isoform_74474_7	chr16	+	177	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57052515	57052692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_57052500_57052700
Isoform_74475_13	chr8	-	1457	1	FSM	ENSMUSG00000033732.11	ENSMUST00000212843.2	1409	1	-66	18	-6	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	111573425	111571968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_111572000_111573400
Isoform_74479_5	chr8	+	321	1	Intergenic	novelGene_1970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	111675440	111675761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_111675400_111675800
Isoform_7448_64	chr11	-	3732	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	32	2	0	-2	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTATAGACCAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	103844850	103712609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
Isoform_74483_426	chr8	+	1278	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	-13	61	-13	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATCTGTTGTGTTTTT	NA	False	NA	9	True	AGTAAA	-26	NA	111782957	111784235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111783000_111784200
Isoform_74484_38	chr8	+	1326	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	False	NA	70	True	NA	NA	NA	111782970	111784296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_111783000_111784300
Isoform_74488_3	chr8	+	2945	1	NIC	ENSMUSG00000047495.16	novel	3842	15	NA	NA	9	-408882	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAACCAAACAAACAAA	9730	False	NA	NA	False	NA	NA	NA	14145883	14148828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_14145900_14148800
Isoform_74489_3	chr8	-	2443	1	Genic_Genomic	ENSMUSG00000003316.15	novel	NA	NA	NA	NA	22021	1108	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTCGAATATTCTC	NA	False	NA	-14	True	AATAAA	-14	NA	111882387	111879944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_111879900_111882400
Isoform_7449_12	chr11	-	3757	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	4	5	4	-5	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTGTATAGACCAG	NA	False	NA	NA	False	AATAAA	-14	NA	103844878	103712612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
Isoform_74490_6	chr8	+	190	1	Intergenic	novelGene_1971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTATATGAGTACACT	1704	False	NA	29	True	NA	NA	NA	111942455	111942645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_111942500_111942600
Isoform_74492_6	chr8	+	177	1	Intergenic	novelGene_1972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	112257203	112257380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_112257200_112257400
Isoform_74493_21	chr8	-	204	1	Intergenic	novelGene_1974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGGTCTTATTTTT	NA	False	NA	-20	True	NA	NA	NA	112595974	112595770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_112595800_112596000
Isoform_74495_3	chr8	-	3257	1	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	6	-4764	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGTAAAAAACAAACAAAC	NA	False	NA	NA	False	AAAACA	-40	NA	112660425	112657168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_112657200_112660400
Isoform_74496_3	chr8	-	179	1	Intergenic	novelGene_1976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAATAATTA	NA	False	NA	NA	False	NA	NA	NA	112697150	112696971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_112697000_112697200
Isoform_74497_4	chr8	-	660	1	NIC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	31	-20059	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAACAAACTAACAA	NA	False	NA	NA	False	AAAACA	-16	NA	112718903	112718243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_112718200_112718900
Isoform_74498_5	chr8	-	633	1	FSM	ENSMUSG00000092086.3	ENSMUST00000071732.7	1056	1	796	-373	796	373	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	112740844	112740211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_112740200_112740800
Isoform_74506_5	chr8	+	179	1	Intergenic	novelGene_1978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	120464063	120464242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_120464100_120464200
Isoform_74509_7	chr8	+	876	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	-201	1648	-201	-1648	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	120828119	120828995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_120828100_120829000
Isoform_74510_6	chr8	+	1524	1	Intergenic	novelGene_1980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGTTAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121015446	121016970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_121015400_121017000
Isoform_74511_7	chr8	-	199	1	Intergenic	novelGene_1981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGATGTTCATTGAGA	NA	False	NA	-2	True	NA	NA	NA	121047827	121047628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_121047600_121047800
Isoform_74512_3	chr8	-	178	1	Intergenic	novelGene_1982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121317922	121317744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_121317700_121317900
Isoform_74513_19	chr8	-	1992	1	NIC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	1	-5448	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	121394825	121392833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_121392800_121394800
Isoform_74516_20	chr4	-	189	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCATTCTGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152293091	152292902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_-_152292900_152293100
Isoform_74517_5	chr5	+	152	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	114671764	114671916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_114671800_114671900
Isoform_74518_49	chr8	-	206	1	Intergenic	novelGene_1984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122261291	122261085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_122261100_122261300
Isoform_74519_8	chr8	+	1375	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	-6	33	-6	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGCAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	122268812	122270187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_122268800_122270200
Isoform_7452_4	chr11	-	883	8	ISM	ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	0	29830	0	105	5prime_fragment	FALSE	canonical	3	278	junction_1	26.1689955200923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	103844850	103801173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
Isoform_74521_3	chr8	+	171	1	Intergenic	novelGene_1985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGTCTGACAGG	830	False	NA	NA	False	NA	NA	NA	122439066	122439237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_122439100_122439200
Isoform_74528_3	chr8	+	3365	1	NIC	ENSMUSG00000004568.14	novel	3843	12	NA	NA	10	6113	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3443047	3446412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_3443000_3446400
Isoform_7453_3	chr11	-	5164	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	8	255	8	-211	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	8177	False	NA	NA	False	NA	NA	NA	104333109	104224581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_74530_6	chr8	+	238	1	Intergenic	novelGene_1986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTTTTAGTAGTGTA	NA	False	NA	NA	False	AATAAA	-9	NA	122732858	122733096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_122732900_122733100
Isoform_74531_6	chr8	-	2698	1	NIC	ENSMUSG00000006519.12	novel	744	6	NA	NA	2	-4025	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAACAGAAGGAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	123159667	123156969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123157000_123159700
Isoform_74532_26	chr8	-	677	1	NIC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	5	-64724	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	6116	False	NA	NA	False	NA	NA	NA	123278063	123277386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_123277400_123278100
Isoform_74533_3	chr8	-	1014	1	Genic_Genomic	ENSMUSG00000014444.18	novel	NA	NA	NA	NA	-332	-64724	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	5779	False	NA	NA	False	NA	NA	NA	123278400	123277386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_123277400_123278400
Isoform_74535_4	chr8	+	2007	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	121	9	121	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATACTCATGTTTTA	NA	False	NA	0	True	NA	NA	NA	123769325	123771332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123769300_123771300
Isoform_74537_6	chr8	+	654	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	157	1326	157	-1326	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTATAGGCTTTTTAT	NA	False	NA	NA	False	CATAAA	-22	NA	123769361	123770015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123769400_123770000
Isoform_74539_4	chr8	+	1228	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	184	725	184	-725	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTG	NA	False	NA	NA	False	ACTAAA	-18	NA	123769388	123770616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_123769400_123770600
Isoform_74543_8	chr8	-	173	1	Intergenic	novelGene_1987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAAAAACTAGT	NA	False	NA	NA	False	NA	NA	NA	124522792	124522619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_124522600_124522800
Isoform_74544_3	chr8	+	172	1	Intergenic	novelGene_1988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAAGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	124536311	124536483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_124536300_124536500
Isoform_74546_6	chr8	-	1389	1	Genic_Genomic	ENSMUSG00000039509.9	novel	NA	NA	NA	NA	-6	-28047	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAAAAACCAGT	NA	False	NA	NA	False	NA	NA	NA	124676010	124674621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_124674600_124676000
Isoform_74547_4	chr8	+	922	1	NIC	ENSMUSG00000110615.2	novel	1026	2	NA	NA	-4	-2448	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	124676154	124677076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_124676200_124677100
Isoform_7455_9	chr11	-	4745	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-211	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_15	56.9102997903035	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	9750	False	NA	NA	False	NA	NA	NA	104360269	104224581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
Isoform_74552_4	chr8	-	208	1	Intergenic	novelGene_1990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGACTGAGCATGCACC	NA	False	NA	-1	True	AATAAA	-7	NA	124791474	124791266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_124791300_124791500
Isoform_74553_4	chr8	-	228	1	Intergenic	novelGene_1991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGAAACAGGGTCTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	124801411	124801183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_124801200_124801400
Isoform_74554_11	chr8	-	1976	1	Intergenic	novelGene_1894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	6101	False	NA	NA	False	NA	NA	NA	18896171	18894195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_18894200_18896200
Isoform_74557_9	chr8	-	4567	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	29	2	29	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGTAGAGAACTTTA	NA	False	NA	-26	True	AATAAA	-19	NA	125624415	125619848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125619800_125624400
Isoform_74558_8	chr8	-	4669	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-73	2	-73	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGTAGAGAACTTTA	NA	False	NA	-26	True	AATAAA	-19	NA	125624517	125619848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_125619800_125624500
Isoform_7456_4	chr11	-	4554	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	429	527	-160	-211	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	8598	False	NA	NA	False	NA	NA	NA	104332688	104224581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
Isoform_74562_1664	chr8	+	681	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-6	-84	-6	84	mono-exon	FALSE	NA	NA	NA	NA	NA	1664	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGGGACT	7111	False	NA	NA	False	AATAAA	-19	NA	19542945	19543626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_19542900_19543600
Isoform_74569_3	chr8	+	2287	1	Intergenic	novelGene_1992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	125981063	125983350	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_125981100_125983400
Isoform_7457_3	chr11	-	4562	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-588	-211	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_14	61.3522782039618	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	9744	False	NA	NA	False	NA	NA	NA	104360275	104224581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
Isoform_74571_25	chr8	+	3503	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	42	-3	42	3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGTGTTTATTTTTAA	NA	False	NA	5	True	AATAAA	-18	NA	126396598	126400101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_126396600_126400100
Isoform_74574_4	chr8	-	195	1	Intergenic	novelGene_1993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCGTT	NA	False	NA	NA	False	NA	NA	NA	127716256	127716061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_127716100_127716300
Isoform_74575_3	chr8	+	198	1	Intergenic	novelGene_1901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATATATATATATATATAA	NA	False	NA	NA	False	NA	NA	NA	21125772	21125970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_21125800_21126000
Isoform_74577_3	chr8	+	301	1	Genic_Genomic	ENSMUSG00000065952.14	novel	NA	NA	NA	NA	-11	-5371	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	3617978	3618279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_3618000_3618300
Isoform_74578_8	chr2	+	429	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGGGTTTAAAGTC	1069	False	NA	NA	False	NA	NA	NA	143991091	143991520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_+_143991100_143991500
Isoform_7458_5	chr11	-	5566	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-137	-4	0	4	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCAAGGTGTTAAAGCT	2066	False	NA	-28	True	AATAAA	-20	NA	104441446	104393566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
Isoform_74580_26	chr8	+	186	1	Intergenic	novelGene_1895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19755242	19755428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_19755200_19755400
Isoform_74581_6	chr8	+	4262	1	FSM	ENSMUSG00000110669.2	ENSMUST00000212002.2	111	1	-16	-4135	-16	4135	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACACCCT	NA	False	NA	NA	False	AATGAA	-33	NA	19834745	19839007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_19834700_19839000
Isoform_74583_25	chr8	+	4341	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	-25061	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-39	NA	20016486	20020827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_20016500_20020800
Isoform_74585_40	chr8	+	4257	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	-25061	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-39	NA	20016570	20020827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_20016600_20020800
Isoform_74588_6	chr8	+	182	1	Intergenic	novelGene_1902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACCAAAAAA	NA	False	NA	NA	False	AATAGA	-13	NA	21130921	21131103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_21130900_21131100
Isoform_74589_17	chr8	+	2941	1	Intergenic	novelGene_1896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	20119954	20122895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_20120000_20122900
Isoform_74590_39	chr8	+	2904	1	Intergenic	novelGene_1897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	20119991	20122895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_20120000_20122900
Isoform_74592_5	chr8	+	4266	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-9	-24890	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7179	False	NA	NA	False	AATGAA	-39	NA	20143838	20148104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_20143800_20148100
Isoform_74593_6	chr8	+	195	1	Intergenic	novelGene_1898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20181042	20181237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_20181000_20181200
Isoform_74594_3	chr8	+	3444	1	Intergenic	novelGene_1899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAAAACCCAAAGCAA	5401	False	NA	NA	False	NA	NA	NA	20555711	20559155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_20555700_20559200
Isoform_74595_5	chr8	+	4332	1	FSM	ENSMUSG00000110458.2	ENSMUST00000211922.2	111	1	-93	-4128	-93	4128	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-36	NA	20697891	20702223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_20697900_20702200
Isoform_74597_10	chr8	+	4261	1	Intergenic	novelGene_1900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	5921	False	NA	NA	False	AATGAA	-39	NA	21090321	21094582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_21090300_21094600
Isoform_74598_5	chr8	+	182	1	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	37598	1253	23349	-1253	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACCAAAAAA	NA	False	NA	NA	False	AATAGA	-13	NA	20054063	20054245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_20054100_20054200
Isoform_74599_5	chr8	+	317	1	FSM	ENSMUSG00000087687.4	ENSMUST00000208185.2	376	1	49	10	-2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATATTTGGAAAAAAAAAA	5636	False	NA	NA	False	NA	NA	NA	3671599	3671916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_3671600_3671900
Isoform_746_28	chr10	-	634	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	26	215	26	-7	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTGGTTTGTT	NA	False	NA	-5	True	AATAAA	-35	NA	30494449	30484351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
Isoform_74600_7	chr8	-	1403	1	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	19	-9797	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAAAAAAGGTCACT	NA	False	NA	NA	False	NA	NA	NA	22675816	22674413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_22674400_22675800
Isoform_74601_18	chr8	+	184	1	Intergenic	novelGene_1903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAAAGTAAGA	NA	False	NA	NA	False	AATAAA	-4	NA	22913650	22913834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_22913600_22913800
Isoform_74605_10	chr8	-	2718	1	NIC	ENSMUSG00000008892.13	novel	1423	9	NA	NA	19	-9074	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAAGAAAACATG	NA	False	NA	NA	False	AGTAAA	-15	NA	23083755	23081037	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_23081000_23083800
Isoform_74607_8	chr8	+	187	1	Intergenic	novelGene_1904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAG	8336	False	NA	NA	False	NA	NA	NA	23093919	23094106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_23093900_23094100
Isoform_74608_5	chr8	-	1098	1	NIC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	2	-10111	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	23747035	23745937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_23745900_23747000
Isoform_74611_8	chr8	+	190	1	Intergenic	novelGene_1906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCTAATCTTCCTTCC	7061	False	NA	NA	False	NA	NA	NA	25701186	25701376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_25701200_25701400
Isoform_74613_6	chr8	+	181	1	Intergenic	novelGene_1907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTTTTTTGGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	26037478	26037659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_26037500_26037700
Isoform_74614_3	chr8	-	995	1	FSM	ENSMUSG00000037363.10	ENSMUST00000209734.2	1063	1	-33	101	-8	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCACCT	2341	False	NA	NA	False	NA	NA	NA	26087537	26086542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_26086500_26087500
Isoform_74615_4	chr8	+	3571	2	Genic_Genomic	ENSMUSG00000097657.3	novel	2884	1	NA	NA	-135	575	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4044490	4048084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_4044989_4045011
Isoform_74616_3	chr10	-	2907	19	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	12711	2241	-12	-2	3prime_fragment	FALSE	canonical	3	1147	junction_16	80.1843747286046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121449510	121425525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391
Isoform_74619_6	chr18	-	176	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	9923	False	NA	NA	False	NA	NA	NA	56459078	56458902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_56458900_56459100
Isoform_74620_4	chr8	-	549	1	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	12	-9316	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	26275214	26274665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_26274700_26275200
Isoform_74622_5	chr8	-	172	1	Intergenic	novelGene_1908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	26438600	26438428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_26438400_26438600
Isoform_74623_4	chr8	+	616	1	FSM	ENSMUSG00000031485.16	ENSMUST00000211281.2	1862	1	-216	1462	11	-1462	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	27532636	27533252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_27532600_27533300
Isoform_74624_3	chr8	-	1257	1	NIC	ENSMUSG00000031488.15	novel	7965	6	NA	NA	-2	-8192	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGTGTAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	27664671	27663414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_27663400_27664700
Isoform_74627_16	chr8	+	178	1	Intergenic	novelGene_1936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATGGTTATAAA	NA	False	NA	NA	False	NA	NA	NA	85371012	85371190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_85371000_85371200
Isoform_74628_8	chr8	-	182	1	Intergenic	novelGene_1909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28367718	28367536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_28367500_28367700
Isoform_74629_6	chr8	-	386	1	FSM	ENSMUSG00000110331.2	ENSMUST00000209275.2	551	1	372	-207	372	207	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCTGTAAAAAAAAAAAAA	NA	False	NA	-21	True	ATTAAA	-17	NA	29776637	29776251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_29776300_29776600
Isoform_74632_20	chr8	-	175	1	Intergenic	novelGene_1910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	31607032	31606857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_31606900_31607000
Isoform_74633_19	chr8	-	2969	1	FSM	ENSMUSG00000083557.2	ENSMUST00000119347.2	1101	1	-36	-1832	-36	1832	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATATCAGGG	NA	False	NA	NA	False	GATAAA	-16	NA	33682360	33679391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_33679400_33682400
Isoform_74634_36	chr8	+	342	1	Intergenic	novelGene_1911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	34035590	34035932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_34035600_34035900
Isoform_74636_8	chr8	+	1106	1	Antisense	novelGene_ENSMUSG00000052906.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34131836	34132942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_+_34131800_34132900
Isoform_74637_21	chr8	+	913	1	Intergenic	novelGene_1912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34132029	34132942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_34132000_34132900
Isoform_74638_6	chr8	-	196	1	Intergenic	novelGene_1913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTATTGGCATATCTAAA	5948	False	NA	NA	False	NA	NA	NA	34141094	34140898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_34140900_34141100
Isoform_74639_4	chr8	-	202	1	Intergenic	novelGene_1914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGTTTGTTACCCAG	NA	False	NA	NA	False	NA	NA	NA	34190931	34190729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_34190700_34190900
Isoform_74644_21	chr8	-	1641	1	FSM	ENSMUSG00000031586.18	ENSMUST00000231942.2	2534	1	-414	1307	0	-1307	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34419834	34418193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_34418200_34419800
Isoform_74646_3	chr8	-	233	1	Intergenic	novelGene_1915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGCGACCATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	34460777	34460544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_34460500_34460800
Isoform_74648_5	chr8	+	5142	1	FSM	ENSMUSG00000023235.15	ENSMUST00000207839.2	2461	1	-15	-2666	8	2666	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4375217	4380359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_4375200_4380400
Isoform_74650_6	chr8	+	2380	1	Genic_Genomic	ENSMUSG00000050271.13	novel	NA	NA	NA	NA	-178	-5715	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACACACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36561803	36564183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_36561800_36564200
Isoform_74652_4	chr8	-	992	1	Genic_Genomic	ENSMUSG00000031523.17	novel	NA	NA	NA	NA	8528	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACACTGATTGAATTTG	NA	False	NA	-12	True	NA	NA	NA	37035895	37034903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_37034900_37035900
Isoform_74654_12	chr8	-	3180	1	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-27	-17491	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37081055	37077875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_37077900_37081100
Isoform_74655_3	chr8	-	174	1	Intergenic	novelGene_1916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAGAAGAAGACG	NA	False	NA	NA	False	NA	NA	NA	37103440	37103266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_37103300_37103400
Isoform_74656_5	chr8	-	178	1	Intergenic	novelGene_1917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38609541	38609363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_38609400_38609500
Isoform_74657_9	chr4	+	178	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108502382	108502560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_108502400_108502600
Isoform_74659_3	chr8	+	1346	1	Genic_Genomic	ENSMUSG00000031592.11	novel	NA	NA	NA	NA	-1	-18170	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTCTC	NA	False	NA	NA	False	NA	NA	NA	41692787	41694133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_41692800_41694100
Isoform_7466_17	chr11	-	2830	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105835049	105824528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
Isoform_74662_5	chr8	+	1013	1	Intergenic	novelGene_1918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	41827887	41828900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_41827900_41828900
Isoform_74665_11	chr8	+	1356	1	Genic_Genomic	ENSMUSG00000091490.4	novel	NA	NA	NA	NA	-6	-5473	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43633571	43634927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_43633600_43634900
Isoform_7467_49	chr11	-	2759	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105834978	105824528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
Isoform_74672_9	chr8	+	1485	2	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-33	-14737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAGAAATAC	NA	False	NA	NA	False	NA	NA	NA	4663133	4664643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_+_4663701_4663725
Isoform_74673_8	chr8	+	1741	1	Intergenic	novelGene_1919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAACCAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	43806967	43808708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_43807000_43808700
Isoform_74674_3	chr8	+	4026	1	Intergenic	novelGene_1920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	45391212	45395238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_45391200_45395200
Isoform_74675_12	chr8	+	1383	1	FSM	ENSMUSG00000018796.14	ENSMUST00000211289.2	1253	1	-131	1	9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	2215	False	NA	NA	False	NA	NA	NA	46924082	46925465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_46924100_46925500
Isoform_74677_12	chr8	-	680	1	Genic_Genomic	ENSMUSG00000063049.5	novel	NA	NA	NA	NA	-27	-5751	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTCCCTTCTTTCGGG	NA	False	NA	NA	False	NA	NA	NA	48128220	48127540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_48127500_48128200
Isoform_74679_7	chr8	-	3533	1	FSM	ENSMUSG00000031563.9	ENSMUST00000212282.2	5592	1	373	1686	0	-1686	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	48443586	48440053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_48440100_48443600
Isoform_7468_8	chr11	-	2764	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-556	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	70.9475549653091	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835869	105824527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105835823
Isoform_74682_5	chr8	+	3494	1	Genic_Genomic	ENSMUSG00000031520.7	novel	NA	NA	NA	NA	-393	-88338	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	628	False	NA	NA	False	NA	NA	NA	54530247	54533741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_54530200_54533700
Isoform_74685_3	chr8	+	2033	1	NIC	ENSMUSG00000038206.14	novel	2466	3	NA	NA	0	-11452	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCTGATTTTG	NA	False	NA	NA	False	NA	NA	NA	57004143	57006176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_57004100_57006200
Isoform_74688_3	chr8	-	180	1	Intergenic	novelGene_1921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGTACCTGTAT	NA	False	NA	NA	False	NA	NA	NA	58214022	58213842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_58213800_58214000
Isoform_74689_8	chr8	-	176	1	Intergenic	novelGene_1886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATCACAT	NA	False	NA	NA	False	NA	NA	NA	6942907	6942731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_6942700_6942900
Isoform_7469_4	chr11	-	2865	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	71.2524853367703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105834968	105824529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831322_105834936
Isoform_74690_5	chr8	-	181	1	Intergenic	novelGene_1922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	60971181	60971000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_60971000_60971200
Isoform_74691_3	chr8	+	206	1	Intergenic	novelGene_1887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	8530664	8530870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_8530700_8530900
Isoform_74692_5	chr5	+	173	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29916185	29916358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_+_29916200_29916400
Isoform_74694_9	chr8	-	577	1	ISM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	23366	1504	15108	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTTTAAGCAATTTT	NA	False	NA	-14	True	AATAAA	-32	NA	8717155	8716578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_-_8716600_8717200
Isoform_74696_3	chr8	+	1176	1	ISM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	29166	6	28426	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTAGAGTTTTT	8776	False	NA	8	True	AATAAA	-16	NA	67342034	67343210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr8_+_67342000_67343200
Isoform_74697_189	chr8	-	1657	1	FSM	ENSMUSG00000030735.7	ENSMUST00000032981.7	1356	1	-68	-233	-68	233	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6271	False	NA	NA	False	AATAAA	-15	NA	67968310	67966653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_67966700_67968300
Isoform_74698_9	chr8	-	176	1	Intergenic	novelGene_1924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATACTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	69274246	69274070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_-_69274100_69274200
Isoform_747_4	chr10	-	434	2	ISM	ENSMUSG00000039697.17	ENSMUST00000215725.2	1445	7	185	75829	-34	-75829	5prime_fragment	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATTTATTTTCCAAT	NA	False	NA	NA	False	NA	NA	NA	30679137	30647715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_30647837_30678824
Isoform_7470_31	chr11	-	2502	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	238	1	-35	-1	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105835000	105824528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_74704_4	chr8	-	915	1	FSM	ENSMUSG00000110444.3	ENSMUST00000211874.2	928	1	11	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAACAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	69848180	69847265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_69847300_69848200
Isoform_74705_3	chr8	-	2199	1	NIC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	25	-4453	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGTTATA	NA	False	NA	NA	False	NA	NA	NA	70078171	70075972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70076000_70078200
Isoform_74706_3	chr1	-	177	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAAGTATGTGGGT	2802	False	NA	NA	False	NA	NA	NA	43931073	43930896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_-_43930900_43931100
Isoform_74707_9	chr8	-	1805	1	Genic_Genomic	ENSMUSG00000044006.9	novel	NA	NA	NA	NA	5516	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTTGTGTCAATTGAAA	NA	False	NA	1	True	ATTAAA	-17	NA	70334821	70333016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_-_70333000_70334800
Isoform_74709_7	chr8	-	3222	1	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-2	-7412	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGAGG	NA	False	NA	NA	False	NA	NA	NA	70495347	70492125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70492100_70495300
Isoform_7471_49	chr11	-	2474	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	267	0	-6	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834971	105824527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
Isoform_74710_4	chr8	+	860	1	NIC	ENSMUSG00000071078.7	novel	1078	4	NA	NA	2	-1545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACACGCCTTTAATC	449	False	NA	NA	False	NA	NA	NA	70583984	70584844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70584000_70584800
Isoform_74711_3	chr8	+	1842	1	NIC	ENSMUSG00000002345.19	novel	810	6	NA	NA	-4	-3991	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	8817	False	NA	NA	False	NA	NA	NA	70592352	70594194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_70592400_70594200
Isoform_74712_9	chr8	+	2148	1	Intergenic	novelGene_1926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGTAAAATA	603	False	NA	NA	False	NA	NA	NA	70611311	70613459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_70611300_70613500
Isoform_74717_3	chr8	+	1138	1	Antisense	novelGene_ENSMUSG00000058301.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTCTTTTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	70805295	70806433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_+_70805300_70806400
Isoform_74718_35	chr8	-	1973	1	NIC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	-20	-24273	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAAAAAGAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	70929575	70927602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_70927600_70929600
Isoform_7472_10	chr11	-	2482	6	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-555	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	67.416318499307	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105835868	105824529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105835823
Isoform_74722_6	chr8	+	508	1	Antisense	novelGene_ENSMUSG00000090137.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	70963129	70963637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr8_+_70963100_70963600
Isoform_74726_851	chr8	+	1679	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-12	0	-12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	851	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTGTCCGCCTCCTT	NA	False	NA	34	True	AGTAAA	-16	NA	71151586	71153265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71151600_71153300
Isoform_7473_6	chr11	-	1137	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	0	273	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050968	106048866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
Isoform_74732_7	chr8	-	3454	2	NNC	ENSMUSG00000031834.16	novel	626	3	NA	NA	7	-857	intron_retention	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGATACTCCAGT	NA	False	NA	NA	False	NA	NA	NA	71229350	71225874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr8_-_71226097_71226118
Isoform_74733_40	chr8	+	812	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	-47	244	-47	-244	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTTTTGGATTTTT	2278	False	NA	15	True	ATTAAA	-16	NA	71229411	71230223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71229400_71230200
Isoform_74734_3	chr8	-	1670	1	NIC	ENSMUSG00000031833.11	novel	530	6	NA	NA	-4	-13467	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAAAAGAAAAATAAGC	NA	False	NA	NA	False	AATACA	-11	NA	71257633	71255963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_71256000_71257600
Isoform_74736_7	chr8	+	679	1	FSM	ENSMUSG00000031505.12	ENSMUST00000209932.2	664	1	-36	21	-16	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	11547550	11548229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_11547600_11548200
Isoform_74738_5	chr8	+	1912	1	FSM	ENSMUSG00000019261.4	ENSMUST00000212823.2	1911	1	2	-3	2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	71358889	71360801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_+_71358900_71360800
Isoform_74739_5	chr8	+	2493	1	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	6	-597	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71849510	71852003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71849500_71852000
Isoform_7474_3	chr11	-	1423	5	FSM	ENSMUSG00000040699.14	ENSMUST00000064545.11	798	5	-235	-390	-20	273	multi-exon	FALSE	canonical	1	1	junction_4	116.808336603172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050988	106048866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050638
Isoform_74740_7	chr8	+	2217	1	NIC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	-931	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	71858653	71860870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71858700_71860900
Isoform_74742_3	chr8	+	1566	1	NIC	ENSMUSG00000031813.9	novel	392	4	NA	NA	0	-34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71995565	71997131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_71995600_71997100
Isoform_74743_26	chr8	+	2300	1	Genic_Genomic	ENSMUSG00000031807.11	novel	NA	NA	NA	NA	-6	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	72044813	72047113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr8_+_72044800_72047100
Isoform_74744_4	chr8	-	2556	1	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	-6	-8846	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	72124391	72121835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_72121800_72124400
Isoform_74746_3	chr8	+	1347	1	NIC	ENSMUSG00000052446.18	novel	2307	4	NA	NA	15	-13792	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACAGCTCAACAAGG	NA	False	NA	NA	False	AATAAA	-23	NA	72704949	72706296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_+_72704900_72706300
Isoform_74748_4	chr8	-	1655	1	NIC	ENSMUSG00000087502.2	novel	963	2	NA	NA	3	-11597	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	72914696	72913041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr8_-_72913000_72914700
Isoform_74749_7	chr8	+	176	1	Intergenic	novelGene_1927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	73031873	73032049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_73031900_73032000
Isoform_7475_14	chr11	-	2981	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-39	8	-39	-8	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCTGAACCAGCATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	106051007	106047089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_74750_11	chr8	+	174	1	Intergenic	novelGene_1928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	73052049	73052223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_73052000_73052200
Isoform_74752_247	chr8	-	467	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-18	702	-18	-702	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGCTA	NA	False	NA	NA	False	TATAAA	-20	NA	73059122	73058655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr8_-_73058700_73059100
Isoform_74754_8	chr9	-	1999	5	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	5	1173	5	-1001	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTAAGTCTGTCGTCT	6	True	NA	34	True	AGTAAA	-13	NA	4309462	4295965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
Isoform_74755_8	chr9	-	1384	5	ISM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-2	1796	0	-1625	intron_retention	FALSE	canonical	3	643	junction_4	110.637640520756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAACAAAACATTTTTAAA	-3	True	NA	NA	False	AATAAA	-24	NA	4309471	4296589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
Isoform_74756_109	chr9	-	1034	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	5	1804	5	-1632	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTATTTAACAAAACAT	6	True	NA	NA	False	AATAAA	-17	NA	4309462	4296596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_74757_6	chr9	-	2430	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	5	408	5	-236	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTGGTAATTTGCAT	6	True	NA	NA	False	TTTAAA	-38	NA	4309462	4295200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_74758_6	chr9	-	2863	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	5	-25	5	25	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCCTTTTAGATT	6	True	NA	NA	False	NA	NA	NA	4309462	4294767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_7476_219	chr11	-	1165	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	0	1785	0	273	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050968	106048866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_74762_58	chr9	-	1571	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	26	1246	26	-1074	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCCATCGACTCAGAT	27	True	NA	-39	True	CATAAA	-40	NA	4309441	4296038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_74764_41	chr9	-	1665	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	5	1173	5	-1001	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTAAGTCTGTCGTCT	6	True	NA	34	True	AGTAAA	-13	NA	4309462	4295965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_74765_24	chr9	-	1691	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-21	1173	-17	-1001	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTAAGTCTGTCGTCT	-20	True	NA	34	True	AGTAAA	-13	NA	4309488	4295965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
Isoform_74769_5	chr9	-	1608	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-43	1245	-41	-1074	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCCATCGACTCAGAT	1	True	NA	-39	True	CATAAA	-40	NA	4309512	4296038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
Isoform_7477_36	chr11	-	1509	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-17	1458	-17	600	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTTCGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	106050985	106048539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
Isoform_74770_6	chr9	-	1002	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-19	1827	-17	-1656	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAATTGCCTGATGTG	-20	True	NA	NA	False	AATAAA	-28	NA	4309488	4296620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
Isoform_74772_11	chr9	-	720	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-25	-1632	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTATTTAACAAAACAT	17	False	4309513	NA	False	AATAAA	-17	NA	4309496	4296596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
Isoform_74774_36	chr9	-	3325	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-2	8	-2	1	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTCTGATGTGAT	-22	True	NA	-9	True	AATAAA	-13	NA	7837060	7818235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
Isoform_74775_6	chr9	-	3068	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTCTGATGTGAT	-20	True	NA	-9	True	AATAAA	-13	NA	7837058	7818235	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
Isoform_74776_12	chr9	-	2481	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	167	19	0	-19	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTTTTTTAAAGAAAAT	-13	True	NA	NA	False	AATAAA	-15	NA	7872858	7848718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
Isoform_74777_16	chr9	-	4211	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-43	3	-43	-3	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCAACTTTTTTAC	-1	True	NA	-9	True	AATAAA	-19	NA	8004640	7932002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_7478_5	chr11	-	1260	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	314	273	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	112.144995430024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051372	106048866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106051185
Isoform_74780_28	chr9	-	4161	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-49	3	-41	-3	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCAACTTTTTTAC	1	True	NA	-9	True	AATAAA	-19	NA	8004638	7932002	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_74782_3	chr9	-	4294	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-185	6	-177	-6	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	NA	False	NA	-12	True	AATAAA	-16	NA	8004774	7932005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
Isoform_74783_3	chr9	-	3789	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-13	-2442	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACATGTGCATATTTT	-4	True	NA	NA	False	ATTAAA	-15	NA	9239119	8996771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_74784_5	chr9	-	3434	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-11	-2795	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGGTCCTAAACATT	-2	True	NA	NA	False	AATATA	-20	NA	9239117	8997124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_74786_4	chr9	-	746	4	ISM	ENSMUSG00000050730.18	ENSMUST00000215397.2	663	6	-240	56585	-39	31667	5prime_fragment	FALSE	canonical	3	59	junction_1	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGACTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	9239145	9115689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_9115763_9155303_9155366_9180027_9180124_9238630
Isoform_74787_9	chr9	-	2130	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	0	393	0	-3	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTTGTTTTGCTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	13738403	13719482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_74789_4	chr9	-	2305	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	-4	222	-4	168	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTTACAGTTTTTAGAC	NA	False	NA	NA	False	AATAAA	-30	NA	13738407	13719311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_7479_5	chr11	-	2116	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	1	14	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	48.4848106060458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	NA	False	NA	1	True	ATTAAA	-27	NA	106084397	106054141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077950_106078007_106084291
Isoform_74790_46	chr9	-	2497	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	27	-1	27	-1	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTAACAAAGGCTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	13738376	13719088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_74791_3	chr9	-	2811	11	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-287	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.0571944860175	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAACAAAGGCTTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	13738690	13719087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_13720137_13721155_13721300_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_74795_9	chr9	-	2421	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-125	-34	27	1	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAACAAAGGCTTTATTTG	NA	False	NA	NA	False	AATAAA	-29	NA	13738376	13719086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
Isoform_748_5	chr10	-	909	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	-3	63	-3	-33	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTACTCTGGAGTATT	NA	False	NA	-8	True	AATAAA	-28	NA	31321854	31208685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_7480_31	chr11	-	2076	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-5	12	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGTGTTTCCTTGTGTT	NA	False	NA	-1	True	ATTAAA	-25	NA	106084393	106054143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
Isoform_74806_6	chr9	-	4221	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	231	18	-28	-18	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTTCTGTGGGCTAT	NA	False	NA	-18	True	NA	NA	NA	14292307	14265303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14269184_14291966
Isoform_74809_5	chr9	-	4255	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	200	15	-59	-15	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTGGGCTATATG	NA	False	NA	-15	True	NA	NA	NA	14292338	14265300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14269184_14291966
Isoform_74814_9	chr9	-	2241	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-1204	0	2	multi-exon	FALSE	canonical	3	83	junction_2	53	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695822	14691080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14692908_14693910_14694259_14695756
Isoform_74815_13	chr9	-	1805	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-768	0	-12	multi-exon	FALSE	canonical	3	83	junction_2	53	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAATGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	14695822	14691516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14692908_14693910_14694259_14695756
Isoform_74816_6	chr9	-	2195	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	316	168	10	1	multi-exon	FALSE	canonical	3	72	junction_2	58.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCAGTGTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	14695836	14691081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14692908_14693910_14694259_14695815
Isoform_74817_15	chr9	-	1768	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	308	603	2	-12	multi-exon	FALSE	canonical	3	72	junction_2	58.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAATGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	14695844	14691516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14692908_14693910_14694259_14695815
Isoform_74818_18	chr9	-	2093	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-19	3658	-19	-1	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACACCCTCTGTGCCCTT	NA	False	NA	-5	True	AATAAA	-20	NA	14956793	14917081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
Isoform_74819_43	chr9	-	2057	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	15	3660	15	-3	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACACCCTCTGTGCCC	NA	False	NA	-7	True	AATAAA	-18	NA	14956759	14917083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
Isoform_7482_56	chr11	-	2042	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-5	-520	-5	2	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAATGGCACCAGTGTT	NA	False	NA	-11	True	ATTAAA	-15	NA	106084393	106054153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_74821_285	chr9	-	2413	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	27	1524	-1	132	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTCCCCAAGTATT	NA	False	NA	-10	True	CATAAA	-12	NA	15191200	15173170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
Isoform_74822_16	chr9	-	2462	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	-22	1524	-22	132	multi-exon	FALSE	canonical	3	139	junction_7	15.3563726777577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTCCCCAAGTATT	NA	False	NA	-10	True	CATAAA	-12	NA	15191249	15173170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
Isoform_74826_8	chr9	-	2297	11	NIC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	5	132	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	54.3050642205679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTCCCCAAGTATT	NA	False	NA	-10	True	CATAAA	-12	NA	15191222	15173170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_15173735_15174899_15175060_15176647_15176766_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
Isoform_74828_3	chr9	-	2620	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	28	2	0	-2	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTCTT	NA	False	NA	-9	True	AATAAA	-13	NA	15217435	15194636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
Isoform_74829_3	chr9	-	939	8	ISM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	11	4064	11	3	5prime_fragment	FALSE	canonical	3	17	junction_5	3.32584192194938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGCTCCCTTGGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	15217452	15198698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
Isoform_7483_18	chr11	-	2120	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-83	-520	-73	2	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAATGGCACCAGTGTT	NA	False	NA	-11	True	ATTAAA	-15	NA	106084471	106054153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_74830_15	chr9	-	577	4	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	6	34631	6	-5144	5prime_fragment	FALSE	canonical	3	124	junction_1	14.522013940528	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAAAAAGAAATGTTA	9713	False	NA	NA	False	CATAAA	-20	NA	15269078	15263023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_15263112_15264194_15264396_15265901_15266033_15268921
Isoform_74832_8	chr9	-	563	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	43	2	43	-2	multi-exon	FALSE	canonical	3	31	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTCTTGTCATATA	NA	False	NA	NA	False	NA	NA	NA	20296430	20263878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20264138_20265359_20265546_20296312
Isoform_74833_3	chr9	-	604	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	71	-67	71	67	multi-exon	FALSE	canonical	3	31	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAACATCATTTCAACG	NA	False	NA	NA	False	NA	NA	NA	20296402	20263809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20264138_20265359_20265546_20296312
Isoform_74835_8	chr9	-	3276	8	ISM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	9	-622	-2	-217	intron_retention	FALSE	canonical	3	13	junction_7	7.74333156163866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404029	20380220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681
Isoform_74836_7	chr9	-	3196	7	FSM	ENSMUSG00000059475.14	ENSMUST00000115562.9	3557	7	-7	368	-7	-209	multi-exon	FALSE	canonical	2	5	junction_6	10.4309901522126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGCTGCATTAACTC	NA	False	NA	2	True	NA	NA	NA	20404049	20380212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
Isoform_74837_3	chr9	-	3059	9	NNC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	-3	-217	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	11.9889271830302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404045	20380220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397612_20397734_20403681_20403748_20403993
Isoform_74838_3	chr9	-	688	2	FSM	ENSMUSG00000060510.15	ENSMUST00000213275.2	679	2	-7	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	AATACA	-8	NA	20432713	20431801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20432416_20432639
Isoform_74839_45	chr9	-	1810	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	277	-1	-216	-1	multi-exon	TRUE	canonical	3	69	junction_2	12	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20553825	20549083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_7484_7	chr11	-	2441	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	4	-928	4	410	multi-exon	TRUE	canonical	3	87	junction_9	16.6340013225922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATTTATTTTATGTT	NA	False	NA	NA	False	TATAAA	-8	NA	106084384	106053745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
Isoform_74840_12	chr9	-	4057	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	-1970	-1	-9	-1	multi-exon	FALSE	canonical	3	69	junction_2	12	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556072	20549083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_74841_23	chr9	-	1876	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	211	-1	211	-1	multi-exon	FALSE	canonical	3	69	junction_2	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20553891	20549083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20550495_20553319_20553393_20553499
Isoform_74844_121	chr9	-	2068	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	-11	-1	-11	-1	multi-exon	FALSE	canonical	3	47	junction_2	23	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556074	20549083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20550495_20553319_20553393_20555490
Isoform_74845_7	chr9	-	1770	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	4	-1013	1	-1	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556050	20549083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
Isoform_74846_9	chr9	-	1970	2	NIC	ENSMUSG00000066892.15	novel	2056	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556050	20549084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_20550495_20555490
Isoform_74847_11	chr9	-	1818	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	76	1	76	-1	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCCTGGGTTGTTTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	20657569	20578989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
Isoform_74848_4	chr9	-	1901	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	-11	5	-11	-2	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGGTGCCTGGGTTGTT	NA	False	NA	-8	True	AATAAA	-13	NA	20657656	20578993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
Isoform_74849_4	chr9	-	2276	28	ISM	ENSMUSG00000004098.8	ENSMUST00000145974.2	3927	42	12	11166	12	-11166	5prime_fragment	TRUE	canonical	1	1	junction_23	3.76832513836353	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAGAAAGGGTGAGGA	1615	False	NA	NA	False	NA	NA	NA	20726351	20705255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
Isoform_7485_88	chr11	-	3218	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	26	1949	26	1422	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGCTGCTTTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	106107144	106090182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_74850_8	chr9	-	2227	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1835	-2	1835	2	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGTCTTCCTGTGT	NA	False	NA	-3	True	NA	NA	NA	20789188	20785101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
Isoform_74851_3	chr9	-	2345	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1713	2	1713	-2	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACTGTGTCTGTCTTCCT	NA	False	NA	-7	True	NA	NA	NA	20789310	20785105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
Isoform_74852_8	chr9	-	939	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1645	-3	1645	3	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTTCCTGTGTG	NA	False	NA	-2	True	NA	NA	NA	20789378	20785100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
Isoform_74855_6	chr9	-	1113	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1470	-2	1470	2	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGTCTTCCTGTGT	NA	False	NA	-3	True	NA	NA	NA	20789553	20785101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
Isoform_7486_59	chr11	-	2143	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	3050	0	321	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACTATGTGGTGATAA	NA	False	NA	-2	True	ATTAAA	-22	NA	106107170	106091283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_74864_1365	chr9	-	1077	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	23	1	6	-1	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	1365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5162	False	NA	-2	True	AGTAAA	-15	NA	20809896	20805645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
Isoform_7487_9	chr11	-	3337	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	-2	1858	-2	1513	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTAATCTTGAATAT	NA	False	NA	84	True	ATTAAA	-24	NA	106107172	106090091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_74889_159	chr9	-	5228	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	490	junction_35	108.724460496474	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864139	20818504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
Isoform_7489_5	chr11	-	3162	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-481	1421	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107651	106090183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
Isoform_74890_134	chr9	-	5234	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	133	0	-1	0	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864142	20818504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
Isoform_74899_331	chr9	-	2761	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	42	3591	-30	2297	multi-exon	FALSE	canonical	3	250	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGGTTATGTGTGTG	8136	False	NA	-1	True	AATAAA	-19	NA	20888035	20877247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20879867_20887893
Isoform_749_4	chr10	-	1216	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	-1	-246	-1	-4	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGATGGCTGGATCTTTT	NA	False	NA	-8	True	ATTAAA	-12	NA	31321852	31208376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_74901_49	chr9	-	2813	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-12	3593	-12	2295	multi-exon	FALSE	canonical	3	250	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGTGGTTATGTGTG	8082	False	NA	-3	True	AATAAA	-17	NA	20888089	20877249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20879867_20887893
Isoform_74904_5	chr9	-	2912	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-100	3582	-100	2306	multi-exon	FALSE	canonical	3	250	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGTGTGTGTGTGTGT	7994	False	NA	8	True	AATAAA	-28	NA	20888177	20877238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20879867_20887893
Isoform_74905_3	chr9	-	1109	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	-105	6	-105	-4	multi-exon	FALSE	canonical	3	10	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATTATTTTTAATTA	816	False	NA	NA	False	AATAAA	-15	NA	20978494	20973694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
Isoform_74907_3	chr9	-	943	3	FSM	ENSMUSG00000079677.3	ENSMUST00000216484.2	633	3	0	-310	0	1	multi-exon	FALSE	canonical	3	331	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984818	20978814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20979222_20979325_20979414_20984370
Isoform_74908_8	chr9	-	853	4	FSM	ENSMUSG00000079677.3	ENSMUST00000217150.2	951	4	100	-2	-8	1	multi-exon	FALSE	canonical	3	216	junction_3	55.4276304943863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984810	20978814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
Isoform_74909_104	chr9	-	798	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	15	-1	-7	1	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984825	20978814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
Isoform_7491_5	chr11	-	4212	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	26	1422	intron_retention	FALSE	canonical	3	609	junction_5	39.8138229245543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGCTGCTTTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	106107144	106090182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_74912_7	chr9	-	730	4	NIC	ENSMUSG00000079677.3	novel	812	5	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	142.14312036348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984812	20978814	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20984684
Isoform_74913_21	chr9	-	864	4	FSM	ENSMUSG00000079677.3	ENSMUST00000215631.2	681	4	-8	-175	-8	0	multi-exon	FALSE	canonical	3	225	junction_3	51.1881062574327	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984810	20978815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20979222_20979325_20979414_20984370_20984615_20984684
Isoform_74915_4	chr9	-	3447	13	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	131.926642073877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGAGCTGGC	NA	False	NA	-11	True	ATTAAA	-22	NA	21003293	20985462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991465_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_74916_35	chr9	-	3452	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	9	9	9	-9	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGAGCTGGC	NA	False	NA	-11	True	ATTAAA	-22	NA	21003295	20985462	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
Isoform_74920_22	chr9	-	4701	24	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	2531	-2	-1366	0	3prime_fragment	FALSE	canonical	3	64	junction_20	13.2590875495451	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21040008	21015363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
Isoform_74921_21	chr9	-	4735	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	35	0	-20	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042504	21015365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
Isoform_74922_5	chr9	-	4772	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	21.7934989669448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21042464	21015364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042391
Isoform_74923_7	chr9	-	1946	8	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	2531	15773	-1366	3616	internal_fragment	FALSE	canonical	3	64	junction_4	17.9193203223874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21040008	21031138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
Isoform_74928_1096	chr9	-	1621	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	21	6209	-19	1522	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061257	21050726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
Isoform_74929_38	chr9	-	2495	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	41	5315	1	2416	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCCTAGCATTCAGGA	NA	False	NA	-12	True	ATTAAA	-18	NA	21061237	21049832	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
Isoform_74932_32	chr9	-	1769	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	-20	1522	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061258	21050726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
Isoform_74937_9	chr9	-	3053	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-3	564	-3	2	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150112	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
Isoform_74938_92	chr9	-	2020	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	252	900	-6	2	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150115	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_74939_22	chr9	-	2582	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	255	335	-3	1	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGTCTATTGTCTCTGC	NA	False	NA	-8	True	AATACA	-29	NA	21150112	21141361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_74941_7	chr9	-	2292	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	-20	900	-12	2	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150387	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
Isoform_74942_7	chr9	-	2167	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	-2	-2	-2	2	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150377	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
Isoform_74943_4	chr9	-	2727	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	1	-565	1	-1	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCGTCTATTGTCTCT	NA	False	NA	-10	True	AATACA	-27	NA	21150374	21141363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
Isoform_74944_27	chr9	-	2162	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	88	901	88	2	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150540	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74945_6	chr9	-	2725	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	88	338	88	-1	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCGTCTATTGTCTCT	NA	False	NA	-10	True	AATACA	-27	NA	21150540	21141363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74946_6	chr9	-	2647	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	78	426	78	-89	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTCTTCAGAGGGCGG	NA	False	NA	-98	True	AATAAA	-15	NA	21150550	21141451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74947_23	chr9	-	2249	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	1	901	1	2	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150627	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74948_6	chr9	-	2702	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	26	423	26	-86	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTCAGAGGGCGGTCG	NA	False	NA	-95	True	AATAAA	-18	NA	21150602	21141448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74949_5	chr9	-	2801	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	15	335	15	2	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTCTATTGTCTCTGCT	NA	False	NA	-7	True	AATACA	-30	NA	21150613	21141360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_7495_5	chr11	-	974	6	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	-26	10598	-26	-3713	5prime_fragment	FALSE	canonical	3	629	junction_3	16.8689063071676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATTCCTGCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	106107196	106098831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
Isoform_74950_3	chr9	-	2485	5	NIC	ENSMUSG00000003308.16	novel	3151	6	NA	NA	35	2	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	43.3647322140931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAGAAAACAA	NA	False	NA	NA	False	AAAACA	-29	NA	21150593	21141926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21142165_21142545_21143199_21144683_21145370_21148366_21149053_21150371
Isoform_74951_5	chr9	-	964	3	NIC	ENSMUSG00000003308.16	novel	317	2	NA	NA	-27	36	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	25	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTGTGTATACATG	NA	False	NA	NA	False	AAAAAG	-9	NA	21150136	21147382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21147613_21148366_21149053_21150088
Isoform_74952_141	chr9	-	2593	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	0	5	0	-5	multi-exon	FALSE	canonical	3	91	junction_10	26.4070697604511	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199265	21184757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_74954_9	chr9	-	2793	17	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-1	-5	intron_retention	TRUE	canonical	3	91	junction_10	27.6433055865249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTCCCCATCCCT	NA	False	NA	-14	True	AATAAA	-14	NA	21199253	21184757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_74955_4	chr9	-	1948	9	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-5	1	intron_retention	FALSE	canonical	3	91	junction_2	11.0446536840229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	21199270	21190247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21190828_21191459_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
Isoform_74956_95	chr9	-	1187	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	181	55	26	1	multi-exon	FALSE	canonical	3	236	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGTTTTGTGTGAT	NA	False	NA	NA	False	TATAAA	-19	NA	21202423	21199760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21200629_21202104
Isoform_74959_3	chr9	-	1287	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	140	-4	-15	4	multi-exon	FALSE	canonical	3	236	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGATTTAGGAGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	21202464	21199701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21200629_21202104
Isoform_74960_5	chr9	-	1729	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	-22	-1	4	1	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTGTGCTTCTTGG	1323	False	NA	-3	True	ATTAAA	-13	NA	21223629	21206755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
Isoform_74961_476	chr9	-	1308	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	69	1	4	-1	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCCTGGTGACTGGGC	NA	False	NA	-6	True	AATAAA	-18	NA	21421479	21418851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
Isoform_74962_24	chr9	-	1273	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	51	-311	4	-1	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCCTGGTGACTGGGC	NA	False	NA	-6	True	AATAAA	-18	NA	21421479	21418851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
Isoform_74964_11	chr9	-	1441	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	4	9	4	-5	multi-exon	FALSE	canonical	3	564	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAATAGTGCCTGGTGA	NA	False	NA	-12	True	AATAAA	-12	NA	21421479	21418857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21419688_21420226_21420648_21421289
Isoform_74965_17	chr9	-	2032	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	10	0	10	0	intron_retention	FALSE	canonical	3	66	junction_4	11.9032558571174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6134	False	NA	-16	True	AATAAA	-17	NA	21504058	21499977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
Isoform_74967_10	chr9	-	1899	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	10	5	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCATGGTGACCATGTGG	6134	False	NA	-11	True	AATAAA	-22	NA	21504058	21499972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
Isoform_74969_5	chr9	-	1958	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-60	-4	-4	4	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6064	False	NA	-12	True	AATAAA	-21	NA	21504128	21499973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
Isoform_74971_9	chr9	-	2104	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	85	-15	29	15	multi-exon	FALSE	canonical	3	66	junction_3	11.8062591493682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGTGGCCTGGTAGTT	6153	False	NA	-1	True	AATAAA	-32	NA	21504039	21499962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
Isoform_74972_7	chr9	-	1977	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	48	-11	10	7	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGACCATGTGGCC	6134	False	NA	-9	True	AATAAA	-24	NA	21504058	21499970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
Isoform_74975_364	chr9	-	690	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	21	655	0	5	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGATTTATCTACTTG	NA	False	NA	-15	True	ATTAAA	-19	NA	21671578	21667392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_74978_21	chr9	-	1349	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	15	2	-6	-2	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	21671584	21666739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
Isoform_74980_15	chr9	-	562	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGATTTATCTACTTGC	NA	False	NA	-14	True	ATTAAA	-20	NA	21671582	21667391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
Isoform_74982_10	chr9	-	605	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	21	1	0	-1	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCGTTCATTGATTTA	NA	False	NA	-23	True	ATTAAA	-11	NA	21671578	21667400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
Isoform_74986_10	chr9	-	5031	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	1	8	1	-8	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACATTGCCTCGTG	NA	False	NA	-20	True	AATAAA	-7	NA	21710039	21678087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_74988_10	chr9	-	5004	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	28	8	28	-8	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACATTGCCTCGTG	NA	False	NA	-20	True	AATAAA	-7	NA	21710012	21678087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_74989_47	chr9	-	4813	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	219	8	1	-8	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAACATTGCCTCGTG	NA	False	NA	-20	True	AATAAA	-7	NA	21709821	21678087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_74993_3	chr9	-	2814	8	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	190	7130	-28	-5852	5prime_fragment	FALSE	canonical	0	0	junction_7	142.480789969048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGAGAGAAGAAA	NA	False	NA	NA	False	GATAAA	-16	NA	21709850	21685209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
Isoform_74995_4	chr9	-	2464	3	ISM	ENSMUSG00000032194.10	ENSMUST00000216008.2	3433	11	-35	25330	-12	2248	5prime_fragment	FALSE	canonical	0	0	junction_2	219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAAATTAACATCTAGC	NA	False	NA	NA	False	NA	NA	NA	21709834	21704687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21706980_21707375_21707491_21709777
Isoform_74998_8	chr9	-	3525	25	ISM	ENSMUSG00000032198.10	ENSMUST00000034728.9	6467	49	28079	1	-6641	-1	3prime_fragment	FALSE	canonical	1	62	junction_3	44.1016620687046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	NA	False	NA	NA	False	TTTAAA	-17	NA	21735852	21711476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692
Isoform_74999_4	chr9	-	6439	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	49.1205292000085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6271	False	NA	NA	False	TTTAAA	-16	NA	21763916	21711477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728577_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_750_5	chr10	-	1212	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	94	2	-9	-1	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGCTGGATCTTTTATT	NA	False	NA	-5	True	ATTAAA	-15	NA	31321860	31208373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_75000_11	chr9	-	3903	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-4	4811	-4	-4811	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	6269	False	NA	NA	False	NA	NA	NA	21763918	21740352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_75001_54	chr9	-	3049	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-4	5665	-4	-5665	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATGTGTACATCTACAT	6269	False	NA	NA	False	NA	NA	NA	21763918	21741206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_75002_3	chr9	-	3495	20	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-4	-4955	intron_retention	FALSE	canonical	0	0	junction_19	43.7592253827028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAAGGGCCGGGTGTGG	6269	False	NA	NA	False	NA	NA	NA	21763918	21740496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21763840
Isoform_75003_39	chr9	-	1868	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	3	-3	3	3	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCCTCTGTTCTCTTTT	6278	False	NA	-3	True	NA	NA	NA	21763909	21748641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_75004_4	chr9	-	2180	14	ISM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	-6	893	-4	-893	5prime_fragment	FALSE	canonical	3	163	junction_1	19.9946738470154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTCCTACCTTTTT	6269	False	NA	NA	False	NA	NA	NA	21763918	21749537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_75005_47	chr9	-	2260	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	44	1531	-9	-380	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGTTCTTAAGATTCA	2277	False	NA	-4	True	ATTAAA	-17	NA	21829444	21820317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
Isoform_75006_18	chr9	-	3070	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	53	712	0	439	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAACC	2286	False	NA	NA	False	NA	NA	NA	21829435	21819498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
Isoform_75007_32	chr9	-	708	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	155	-1	82	0	multi-exon	FALSE	canonical	3	48	junction_3	87.3473271231327	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838676	21832304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
Isoform_75008_45	chr9	-	708	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	82	-5	82	4	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCATTTTTTTCACC	NA	False	NA	-1	True	AATAAA	-18	NA	21838676	21832299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_75009_56	chr9	-	680	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	105	0	-69	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838653	21832304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_7501_569	chr11	-	2877	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	253	14	-22	-14	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAGAGATAACT	NA	False	NA	-28	True	NA	NA	NA	106146652	106139981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_75010_5	chr9	-	858	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	-73	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838831	21832304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
Isoform_75011_5	chr9	-	2195	13	FSM	ENSMUSG00000039632.14	ENSMUST00000044926.6	2197	13	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_6	2.13924960883224	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTATTCACCTCT	4204	False	NA	NA	False	AATAAA	-14	NA	21913930	21901168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21901541_21901692_21901778_21902097_21902254_21902903_21903061_21903143_21903305_21904167_21904321_21904833_21904957_21906108_21906235_21906322_21906425_21906503_21906675_21909181_21909260_21909340_21909463_21913541
Isoform_75012_8	chr9	-	2001	7	FSM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	-13	3026	0	-1570	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	280	False	NA	NA	False	NA	NA	NA	21963319	21929326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21930151_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948157_21962885
Isoform_75015_45	chr9	-	1664	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	9	0	9	0	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5905	False	NA	-9	True	AATAAA	-15	NA	21996714	21983541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
Isoform_75017_60	chr9	-	1665	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	11	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5896	False	NA	-9	True	AATAAA	-15	NA	21996723	21983541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
Isoform_75019_8	chr9	-	1478	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	80.1136947196461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5897	False	NA	-9	True	AATAAA	-15	NA	21996722	21983541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996652
Isoform_75020_4	chr9	-	1554	8	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	9	8	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	84.8771020298148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCTTCCCTTCGTA	5905	False	NA	-1	True	AATAAA	-23	NA	21996714	21983533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996644
Isoform_75021_4	chr9	-	1551	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	87.0528809496426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5892	False	NA	-9	True	AATAAA	-15	NA	21996727	21983541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996652
Isoform_75022_3	chr9	-	1721	10	NNC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.9437917838584	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5890	False	NA	-9	True	AATAAA	-15	NA	21996729	21983541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21983877_21984096_21984147_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
Isoform_75023_3	chr9	-	2290	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	-6	243	intron_retention	TRUE	canonical	3	90	junction_7	50.4534539987914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAAT	5915	False	NA	NA	False	NA	NA	NA	21996704	21983298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
Isoform_75025_4	chr9	-	1313	3	FSM	ENSMUSG00000013822.8	ENSMUST00000213233.2	810	3	-58	-445	-21	-2	multi-exon	FALSE	canonical	1	3	junction_2	229.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCGCCGCTGTACTTC	7972	False	NA	-10	True	AATAAA	-13	NA	22028440	22024288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22024976_22025103_22025240_22027950
Isoform_75026_280	chr9	-	874	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	14	0	14	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7958	False	NA	-8	True	AATAAA	-15	NA	22028454	22024286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22024976_22025103_22025240_22028405
Isoform_75027_3	chr9	-	1917	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	1	-1030	1	1028	multi-exon	FALSE	canonical	3	357	junction_2	52.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAATAAAAA	7945	False	NA	NA	False	NA	NA	NA	22028467	22023256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22024976_22025103_22025240_22028405
Isoform_75028_4	chr9	-	2046	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	-694	-3	361	-1	multi-exon	TRUE	canonical	3	21	junction_4	98.7734149455206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9435	False	NA	-20	True	AATAAA	-20	NA	22042588	22038023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
Isoform_7503_47	chr11	-	3148	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	-18	14	-18	-14	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAGAGATAACT	NA	False	NA	-28	True	NA	NA	NA	106146923	106139981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_75030_8	chr9	-	1438	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	-89	0	-89	0	multi-exon	FALSE	canonical	3	21	junction_4	98.7734149455206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	9990	False	NA	-23	True	AATAAA	-17	NA	22041983	22038026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
Isoform_75031_24	chr9	-	1425	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	4	-10	4	-1	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9078	False	NA	-20	True	AATAAA	-20	NA	22042945	22038023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
Isoform_75032_80	chr9	-	1406	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-51	1	-35	-1	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	8861	False	NA	-20	True	AATAAA	-20	NA	22043162	22038023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
Isoform_75034_44	chr9	-	1336	5	NNC	ENSMUSG00000001348.16	novel	1419	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTCATCAAGGTT	9078	False	NA	-20	True	AATAAA	-20	NA	22042945	22038023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
Isoform_75036_3	chr9	-	3585	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-46	35	-46	-35	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	22171237	22158760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
Isoform_75038_5	chr9	-	3550	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-11	35	-11	-35	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	22171202	22158760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
Isoform_75039_7	chr9	-	3292	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-50	-4	-40	4	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAAATTAAGCATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	22218984	22188039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
Isoform_75040_12	chr9	-	4655	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7184	False	NA	-6	True	AATAAA	-17	NA	22300483	22243310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_75041_27	chr9	-	4621	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	-3	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7218	False	NA	-6	True	AATAAA	-17	NA	22300449	22243310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_75042_56	chr9	-	4596	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	6	3	6	-3	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7189	False	NA	-6	True	AATAAA	-17	NA	22300478	22243310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
Isoform_75051_161	chr9	-	1141	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	-9	2	1	-2	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGTCATTATTAATAC	9501	False	NA	-3	True	AATAAA	-21	NA	22379653	22359608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
Isoform_75056_31	chr9	-	2659	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	124	-2	2	2	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCTTATGGGATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	25062992	25019425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_75057_28	chr9	-	2796	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	-13	-2	-13	2	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCTTATGGGATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	25063129	25019425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_7506_12	chr11	-	2946	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-14	intron_retention	FALSE	canonical	3	632	junction_6	78.119909252422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAAGAGATAACT	NA	False	NA	-28	True	NA	NA	NA	106146652	106139981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
Isoform_75065_5	chr9	-	2755	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	36.7145636454183	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGGGATATTTATTCAA	NA	False	NA	NA	False	AATAAA	-22	NA	25063111	25019419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_25020302_25020735_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
Isoform_75066_9	chr9	-	3668	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	18	2	-18	-2	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTTTTTGTGTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	26717746	26674342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
Isoform_75067_21	chr9	-	2000	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	33	826	-8	406	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTCTCCTAAGGCA	9281	False	NA	-3	True	ATTAAA	-25	NA	26910812	26886265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75068_28	chr9	-	1814	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	32	1013	-9	219	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTGGATTTTTTATT	9280	False	NA	-15	True	AATAAA	-24	NA	26910813	26886452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75069_12	chr9	-	2039	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-4	824	-4	408	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9244	False	NA	-1	True	ATTAAA	-27	NA	26910849	26886263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75070_18	chr9	-	1841	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	5	1013	5	219	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTGGATTTTTTATT	9253	False	NA	-15	True	AATAAA	-24	NA	26910840	26886452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75071_4	chr9	-	2507	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	5	347	5	-347	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATATCACAGTAGTCT	9253	False	NA	NA	False	AATAAA	-39	NA	26910840	26885786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75073_7	chr9	-	2054	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	6	405	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAATTTCTCCTAAGGC	9254	False	NA	-4	True	ATTAAA	-24	NA	26910839	26886266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_75074_9	chr9	-	1844	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-9	221	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGATTTTTTATTTG	9280	False	NA	-13	True	AATAAA	-26	NA	26910813	26886450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_75075_3	chr9	-	2867	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTATTTTCATGTTA	9269	False	NA	NA	False	AGTAAA	-26	NA	26910824	26885438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
Isoform_75076_6	chr9	-	2454	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	0	219	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTGGATTTTTTATT	9292	False	NA	-15	True	AATAAA	-24	NA	26910801	26886452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
Isoform_75077_67	chr9	-	2919	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-36	692	-36	-692	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGACTCTTGCAATCT	NA	False	NA	-2	True	AGTAAA	-37	NA	26941397	26919758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
Isoform_75079_44	chr9	-	3563	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	14	-2	14	2	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGTCTTTCCTTC	NA	False	NA	-1	True	ATTAAA	-44	NA	26941347	26919064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
Isoform_75083_53	chr9	-	1960	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-18	0	7	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066707	27008679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
Isoform_75087_46	chr9	-	1989	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4348	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27033498	27008679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
Isoform_75088_16	chr9	-	1917	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5189	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27032657	27008679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_75089_4	chr9	-	1742	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5136	-228	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTGTTTCAAAACGTA	NA	False	NA	NA	False	TATAAA	-17	NA	27032710	27008907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_75090_5	chr9	-	1218	5	FSM	ENSMUSG00000031990.16	ENSMUST00000167074.2	1234	5	7	9	7	-9	multi-exon	FALSE	canonical	3	88	junction_4	57.1401785086466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27066707	27011972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
Isoform_75091_5	chr9	-	1230	5	NNC	ENSMUSG00000031990.16	novel	1234	5	NA	NA	4365	-9	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	72.4844810976805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27033481	27011972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
Isoform_75092_9	chr9	-	1203	5	NNC	ENSMUSG00000031990.16	novel	1234	5	NA	NA	5161	-9	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	63.0931850519531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27032685	27011972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
Isoform_75098_1560	chr9	-	3227	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	25	7	25	-7	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTAATTTGTTTTTCTTG	NA	False	NA	-7	True	AGTAAA	-17	NA	31043124	31000704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
Isoform_751_8	chr10	-	1167	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-56	-284	1	3	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	0	True	ATTAAA	-20	NA	31321849	31208368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_75100_35	chr9	-	3134	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10840	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	138.463894210729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31032183	31000702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31031995
Isoform_75105_29	chr9	-	3195	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	23	-5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	148.035462879326	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043126	31000702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
Isoform_75112_18	chr9	-	3691	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8715	False	NA	-12	True	AATAAA	-16	NA	31123111	31060855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_75117_671	chr9	-	3658	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-24	0	0	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	-9	True	AATAAA	-19	NA	31123111	31060852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_75122_437	chr9	-	3490	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-28	0	0	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	-9	True	AATAAA	-19	NA	31123111	31060852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_75124_31	chr9	-	3537	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-74	-1	-46	1	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGTTCCTGACCAT	8669	False	NA	-8	True	AATAAA	-20	NA	31123157	31060851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
Isoform_75131_78	chr9	-	2035	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	52	8	52	-8	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAAGCACTTGTGGGG	NA	False	NA	-10	True	ATTAAA	-16	NA	35028117	34957879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
Isoform_75134_461	chr9	-	1204	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	64	6	-4	-2	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACTGATGGTGTAGCC	NA	False	NA	-9	True	AATAAA	-16	NA	35087293	35035709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
Isoform_75135_23	chr9	-	1346	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	302.376375105963	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTGATGGTGTAGCCC	NA	False	NA	-8	True	AATAAA	-17	NA	35087293	35035708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
Isoform_75138_36	chr9	-	2296	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	15	-1	15	1	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7992	False	NA	NA	False	NA	NA	NA	35111209	35098079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_75139_4	chr9	-	2359	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-48	-1	-6	1	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7929	False	NA	NA	False	NA	NA	NA	35111272	35098079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
Isoform_75140_14	chr9	-	2300	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	43	-560	1	1	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	7978	False	NA	NA	False	NA	NA	NA	35111223	35098079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_75141_35	chr9	-	2265	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	78	-560	-9	1	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8013	False	NA	NA	False	NA	NA	NA	35111188	35098079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
Isoform_75144_128	chr9	-	2200	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	75	14	0	-14	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122276	35115517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_75145_217	chr9	-	2166	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	109	14	0	-14	multi-exon	TRUE	canonical	3	179	junction_9	18.9747200242849	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122242	35115517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_75146_10	chr9	-	2052	10	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.2654594122089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122242	35115517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35121240_35121462_35122102
Isoform_75147_4	chr9	-	2188	11	FSM	ENSMUSG00000039048.16	ENSMUST00000043805.15	2232	11	29	15	3	-15	multi-exon	FALSE	canonical	1	3	junction_1	62.4467773387867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122247	35115518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_75149_7	chr9	-	2355	10	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	0	-14	intron_retention	FALSE	canonical	3	179	junction_8	19.4218916829234	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	NA	False	NA	NA	False	NA	NA	NA	35122250	35115517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
Isoform_75150_17	chr9	-	1617	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	30	213	2	2	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCTCTACTTTGAA	6394	False	NA	-18	True	ATTAAA	-23	NA	35179071	35128528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_75151_15	chr9	-	1386	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	9	267	-4	3	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTCTACTTTGAAG	6398	False	NA	-17	True	ATTAAA	-24	NA	35179067	35128527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
Isoform_75152_9	chr9	-	1608	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.0611932846452	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTCTGGCTCTACTTT	6398	False	NA	-21	True	ATTAAA	-20	NA	35179067	35128531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_35129044_35129224_35129285_35132675_35132960_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_75153_13	chr9	-	1611	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTCTACTTTGAAG	6398	False	NA	-17	True	ATTAAA	-24	NA	35179067	35128527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
Isoform_75154_4	chr9	-	1365	7	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	58.402815761647	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGGCTCTACTTTGA	6414	False	NA	-19	True	ATTAAA	-22	NA	35179051	35128529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
Isoform_75156_8	chr9	-	1719	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	15	5200	15	-5200	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGAGGGCTCTTTGAAA	NA	False	NA	NA	False	AATAAA	-23	NA	35469809	35453142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
Isoform_75157_110	chr9	-	1672	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	295	6	-6	-6	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGAGTTTGAACCTT	NA	False	NA	45	True	ATTAAA	-11	NA	35481399	35472121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
Isoform_7516_2552	chr11	-	2764	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	NA	False	NA	-7	True	AATAAA	-20	NA	106163815	106154004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
Isoform_75161_5	chr9	-	2615	12	FSM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	225	957	225	1	multi-exon	FALSE	canonical	3	367	junction_7	38.0821209215597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	1157	False	NA	NA	False	ATTAAA	-13	NA	36637445	36620734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092
Isoform_75165_104	chr9	-	2385	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	57	955	-16	3	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCCTGTATTCCTTT	705	False	NA	NA	False	ATTAAA	-15	NA	36637897	36620732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
Isoform_75168_10	chr9	-	3180	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	57	160	-16	-160	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTAACAACTGTTTT	705	False	NA	-8	True	TATAAA	-18	NA	36637897	36619937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
Isoform_7517_117	chr11	-	2791	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-46	2	-46	-2	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163844	106154006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
Isoform_75175_621	chr9	-	2729	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	70	3068	0	14	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTGCTGTTTCTGGGC	NA	False	NA	-5	True	NA	NA	NA	36678905	36643707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
Isoform_75186_33	chr9	-	2377	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	-67	-1	21	1	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708636	36690453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
Isoform_75189_422	chr9	-	2162	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	59	-1	27	1	multi-exon	TRUE	canonical	3	488	junction_2	34.4551882885582	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708630	36690453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_75190_69	chr9	-	2225	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	-4	-1	-4	1	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708693	36690453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_75193_6	chr9	-	2040	10	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	159.906994573659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATATGTATAATGTTT	NA	False	NA	-10	True	ATTAAA	-15	NA	36708636	36690456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_75194_6	chr9	-	838	4	ISM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	40	8654	8	1084	5prime_fragment	FALSE	canonical	3	489	junction_3	33.6386021641143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	36708649	36699108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_36699550_36701075_36701222_36704535_36704646_36708508
Isoform_75195_7	chr9	-	3486	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	141	5	0	-2	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAATACTGATGCACAGTT	NA	False	NA	-10	True	AGTAAA	-14	NA	37058562	36802282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
Isoform_75197_59	chr9	-	2608	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	328	3007	4	-80	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCACTGCTTATCCT	NA	False	NA	-6	True	AATACA	-15	NA	37166706	37141887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_75198_22	chr9	-	2886	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	329	2728	5	3	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGGTTCTCACTTTA	NA	False	NA	0	True	AATAAA	-13	NA	37166705	37141608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
Isoform_75200_21	chr9	-	2332	12	ISM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	9	27048	-2	10099	5prime_fragment	FALSE	canonical	2	5	junction_5	5.1425947722658	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGTTCTTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	37259679	37214178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
Isoform_75202_9	chr9	-	2113	12	ISM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	34	27048	-6	10099	5prime_fragment	FALSE	canonical	2	5	junction_5	5.1425947722658	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGTTCTTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	37259694	37214178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
Isoform_75203_3	chr9	-	584	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	109	3	-43	-3	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTGTGGTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	37524909	37514588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
Isoform_75205_1847	chr9	-	1483	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	77	424	2	-5	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568531	37560482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
Isoform_75206_64	chr9	-	1528	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	32	424	32	-5	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568576	37560482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
Isoform_75216_3	chr9	-	3091	14	NNC	ENSMUSG00000032020.16	novel	6354	14	NA	NA	-209	707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.56051030416819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAGAAAACA	6713	False	NA	NA	False	NA	NA	NA	41069007	40925309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962608_40962667_41068594
Isoform_75217_4	chr9	-	2464	18	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	123991	3761	-14472	1258	3prime_fragment	FALSE	canonical	3	404	junction_17	89.6061740952383	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGGAAAA	236	False	NA	NA	False	NA	NA	NA	41911602	41879776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539
Isoform_75222_47	chr9	-	2243	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	2544	0	594	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATCCACTTAAATGTTA	NA	False	NA	-12	True	AATAAA	-17	NA	42175552	42165434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
Isoform_75223_3	chr9	-	4788	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	-1	0	1	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTGTGGACCTGTG	NA	False	NA	0	True	NA	NA	NA	42175552	42162889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
Isoform_75226_3	chr9	-	2200	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-38	-1459	-37	595	multi-exon	TRUE	canonical	2	2	junction_4	78.337411241373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCCACTTAAATGTTAT	NA	False	NA	-11	True	AATAAA	-18	NA	42175589	42165433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
Isoform_75229_3	chr9	-	3300	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	26	1674	7	0	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAATAGAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42383528	42325285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
Isoform_75230_3	chr9	-	2150	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	-26	2876	-19	483	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGTGTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	42383580	42326487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
Isoform_75232_5	chr9	-	3617	21	FSM	ENSMUSG00000032017.15	ENSMUST00000114865.8	5887	21	-6	2276	-6	1	multi-exon	TRUE	canonical	1	2	junction_7	2.95761728423405	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTGATGTCCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	42855795	42431706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42855622
Isoform_75233_4	chr9	-	2325	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-20	4	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	43017302	42936238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
Isoform_75234_13	chr9	-	3476	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	19	8	-7	-8	multi-exon	FALSE	canonical	3	19	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGAGTCTGCCTTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	43027846	43019952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_43023154_43024755_43024956_43027771
Isoform_75235_32	chr9	-	2646	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	-122	-2	-122	2	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTCAGAGGAGTGTT	NA	False	NA	NA	False	CATAAA	-19	NA	43117174	43035231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
Isoform_75237_19	chr9	-	2795	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5493	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGTTCAGAGGAGTGT	5114	False	NA	NA	False	CATAAA	-18	NA	43111559	43035232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
Isoform_75238_5	chr9	-	2452	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	6381	5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_12	24.3903441732356	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCAGAGGAGTGTTTTA	6002	False	NA	NA	False	CATAAA	-22	NA	43110671	43035228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43110644
Isoform_75239_14	chr9	-	1937	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-70	659	-70	573	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTAGGCTTTCGGAG	NA	False	NA	6	True	AATAAA	-31	NA	43151278	43133190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
Isoform_75240_59	chr9	-	1876	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-18	668	-18	564	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGGCGCCAGCTTAGG	NA	False	NA	-3	True	AATAAA	-22	NA	43151226	43133199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
Isoform_75241_10	chr9	-	5065	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	25	6282	25	4	multi-exon	TRUE	canonical	1	3	junction_5	3.59382185918495	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAATGAAAAT	2939	False	NA	NA	False	NA	NA	NA	44145321	44060554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
Isoform_75243_4	chr9	-	2256	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	7	432	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.8859246704799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATTTCTTAAGTTTGA	NA	False	NA	-5	True	AATAAA	-18	NA	44216961	44206971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216912
Isoform_75244_11	chr9	-	2092	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	8	3233	8	434	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTTAAGTTTGATG	NA	False	NA	-3	True	AATAAA	-20	NA	44216960	44206969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
Isoform_75245_3	chr9	-	3097	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	37	2199	11	1468	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44216931	44205935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
Isoform_75246_46	chr9	-	3321	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	38	978	5	-4	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGGAGTGGCTGGTTA	5353	False	NA	NA	False	NA	NA	NA	44231544	44221511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_75248_5	chr9	-	3359	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	0	978	0	-4	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGGAGTGGCTGGTTA	5315	False	NA	NA	False	NA	NA	NA	44231582	44221511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_75249_8	chr9	-	3359	14	NIC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	10.0701680236066	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGGAGTGGCTGGTTA	5318	False	NA	NA	False	NA	NA	NA	44231579	44221511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_75250_3	chr9	-	2803	13	FSM	ENSMUSG00000032120.12	ENSMUST00000214602.2	2808	13	3	2	3	-2	multi-exon	FALSE	canonical	3	36	junction_1	6.46947962873883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACATTTATTACATTT	5351	False	NA	NA	False	NA	NA	NA	44231546	44224269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
Isoform_75251_1165	chr9	-	1551	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	44	10	44	3	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	1165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTCTGAGACCTTTCT	1452	False	NA	-1	True	AATAAA	-23	NA	44255481	44247645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
Isoform_75258_3	chr9	-	3161	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-3	-172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	77.9168787875901	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGACTTTATGGAGAC	6401	False	NA	-33	True	AATAAA	-21	NA	44272944	44259396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272742
Isoform_75259_190	chr9	-	825	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	51	59	-13	2	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCTCCTAACTGATCA	2018	False	NA	-6	True	AATAAA	-19	NA	44318352	44315053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
Isoform_75260_524	chr9	-	984	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	235	1	-3	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1708	False	NA	-9	True	AATAAA	-16	NA	44318662	44315056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
Isoform_75263_15	chr9	-	1203	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	16	1	16	-1	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	1489	False	NA	-9	True	AATAAA	-16	NA	44318881	44315056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
Isoform_75269_6	chr9	-	1217	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	9.58331884056875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTACAGCTGATTGAACC	8940	False	NA	-6	True	AATAAA	-15	NA	44329336	44321461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_75270_20	chr9	-	1184	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	535	6	3	-2	multi-exon	FALSE	canonical	3	28	junction_6	11.2853887837327	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTACAGCTGATTGAACC	8945	False	NA	-6	True	AATAAA	-15	NA	44329331	44321461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_75271_6	chr9	-	2650	5	FSM	ENSMUSG00000043923.9	ENSMUST00000213813.2	2675	5	0	25	0	-25	multi-exon	FALSE	canonical	3	40	junction_2	8.04285397107271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGGATATAACAATAAATA	8940	False	NA	NA	False	NA	NA	NA	44329336	44322681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
Isoform_75272_4	chr9	-	903	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-242	221	-121	-221	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGACCCTGGGGCTGG	9093	False	NA	-1	True	AATAAA	-21	NA	44352554	44347072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_44347400_44347500_44347576_44352053
Isoform_75273_5	chr9	-	760	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-104	226	17	-226	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGACCTGGACCCTGGG	9231	False	NA	-6	True	AATAAA	-16	NA	44352416	44347077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_44347400_44347500_44347576_44352053
Isoform_75274_6	chr9	-	2999	13	NIC	ENSMUSG00000048537.17	novel	3589	17	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	9.3392838174146	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619825	44597604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
Isoform_75275_6	chr9	-	3051	13	NIC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	9.86963637740632	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619799	44597604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619579
Isoform_75276_49	chr9	-	2938	13	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	4738	2	-75	0	3prime_fragment	FALSE	canonical	3	19	junction_8	6.21601873299051	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	44619799	44597606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
Isoform_75277_3	chr9	-	2594	8	NNC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	-906	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.4769174633703	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44610048	44597604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44609684
Isoform_75279_352	chr9	-	3474	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	16	582	16	-582	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGATGTTTACTGGAC	NA	False	NA	-23	True	AATAAA	-12	NA	44679126	44653442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
Isoform_75281_30	chr9	-	4010	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	30	-15	-30	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44679110	44652890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
Isoform_75288_4	chr9	-	2387	9	FSM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	57	4	-8	-4	multi-exon	FALSE	canonical	2	3	junction_8	3.68908864084343	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGAAGTGTTTGTT	8229	False	NA	NA	False	AGTAAA	-11	NA	44710547	44705076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710055_44710477
Isoform_75289_926	chr9	-	451	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	36	57	1	-4	multi-exon	FALSE	canonical	3	4613	junction_2	56	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGCTGTGTTTTCTC	NA	False	NA	-33	True	AATAAA	-15	NA	44832004	44824571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44824765_44825948_44826110_44831907
Isoform_7529_27	chr11	-	1238	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	-42	-1	-42	1	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTCGTGATATCATC	5047	False	NA	-2	True	AATAAA	-18	NA	106205397	106202168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
Isoform_75291_9	chr9	-	3870	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	-5	394	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCTGCCATTTTTT	5335	False	NA	NA	False	NA	NA	NA	44876863	44836751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_75292_3	chr9	-	6191	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTGTTAGTTCTTCAT	5339	False	NA	-2	True	AATAAA	-17	NA	44876859	44834426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_75294_10	chr9	-	3275	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	9	-98	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	10.0238469985589	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTGTGAAAATATTTT	5331	False	NA	NA	False	GATAAA	-17	NA	44876867	44844366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_75295_4	chr9	-	836	4	ISM	ENSMUSG00000059890.17	ENSMUST00000138559.9	3374	9	9	6624	9	270	5prime_fragment	FALSE	canonical	3	48	junction_1	11.6714276000077	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5331	False	NA	NA	False	NA	NA	NA	44876867	44863976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_44864471_44871276_44871438_44874634_44874731_44876782
Isoform_75296_6	chr9	-	2841	11	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47980	-1315	-3216	3	3prime_fragment	FALSE	canonical	3	64	junction_3	8.47348806572594	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTGAGTGTGCTGGT	NA	False	NA	40	True	ATTAAA	-28	NA	45687045	45678240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974
Isoform_75297_6	chr9	-	3298	12	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47405	-1316	-3791	4	3prime_fragment	FALSE	canonical	3	64	junction_3	8.12505562600157	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	41	True	ATTAAA	-29	NA	45687620	45678239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162
Isoform_75298_84	chr9	-	542	4	ISM	ENSMUSG00000043987.19	ENSMUST00000117194.8	5541	30	28	42814	-24	8310	5prime_fragment	FALSE	canonical	3	34	junction_3	3.85861230093008	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	45739961	45721057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_45721207_45729275_45729388_45734943_45735063_45739799
Isoform_753_3	chr10	-	1147	6	FSM	ENSMUSG00000000296.9	ENSMUST00000215515.2	857	6	-38	-252	-2	1	multi-exon	FALSE	canonical	3	19	junction_1	227.386543137451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGATCTTTTATTTCT	NA	False	NA	-2	True	ATTAAA	-18	NA	31321853	31208370	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_7530_37	chr11	-	4829	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-84	189	-84	57	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3247	False	NA	-1	True	ATTAAA	-27	NA	106503840	106393161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
Isoform_75301_12	chr9	-	2731	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	444	789	-26	1	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAGGTTCCATTTC	9564	False	NA	NA	False	AGTAAA	-19	NA	45817731	45775595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
Isoform_75304_5	chr9	-	4313	27	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	40.2004776385414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866570	45849172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45858996_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_75305_57	chr9	-	4250	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	-2	0	-2	0	multi-exon	FALSE	canonical	3	112	junction_16	17.0789226826519	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	NA	False	NA	-14	True	AATAAA	-34	NA	45866558	45849154	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
Isoform_75307_21	chr9	-	4205	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	210	2458	-6	-2458	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACTGATGTCTGTTTC	4122	False	NA	-5	True	TATAAA	-19	NA	45896139	45876614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
Isoform_75309_4	chr9	-	2142	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	188	4543	-28	1282	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTAGCTTTGCTATCT	4100	False	NA	NA	False	NA	NA	NA	45896161	45878699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
Isoform_7531_3	chr11	-	5000	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-58	-8	-58	8	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCATGTTATTTTTTA	3273	False	NA	NA	False	AATAAA	-19	NA	106503814	106392964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
Isoform_75313_3	chr9	-	4160	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	1	-3367	1	-2458	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACTGATGTCTGTTTC	9712	False	NA	-5	True	TATAAA	-19	NA	45896691	45876614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
Isoform_75315_221	chr9	-	1076	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	0	1	0	-1	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCGGCACCCTCTGCT	NA	False	NA	-2	True	AATAAA	-25	NA	48391911	48379812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
Isoform_75317_14	chr9	-	1168	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	-93	2	-81	-2	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48392004	48379813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
Isoform_75320_5	chr9	-	625	5	NIC	ENSMUSG00000032026.8	novel	693	4	NA	NA	3	18	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	484.35388663662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTAGTAGTGTGGATT	NA	False	NA	8	True	AATAAA	-33	NA	48391903	48384767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_48384922_48385701_48385814_48386419_48386498_48390609_48390694_48391706
Isoform_75321_4	chr9	-	1996	3	FSM	ENSMUSG00000032026.8	ENSMUST00000214161.2	553	3	-2	-1441	-2	11	multi-exon	FALSE	canonical	3	1141	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTAGTGTTAGTAGT	NA	False	NA	1	True	AATAAA	-26	NA	48391895	48384774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48386498_48390609_48390694_48391706
Isoform_75322_26	chr9	-	1881	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-11	-3	-6	3	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAATGTGTCTCTTT	NA	False	NA	-9	True	ATTAAA	-7	NA	48406605	48400005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
Isoform_75323_53	chr9	-	1764	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	4	5	1	3	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAATGTGTCTCTTT	NA	False	NA	-9	True	ATTAAA	-7	NA	48406593	48400005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
Isoform_75326_7	chr9	-	1030	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	0	13	0	1	multi-exon	FALSE	canonical	3	43	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTCTGAATGCAG	NA	False	NA	-3	True	ATTAAA	-20	NA	48516453	48503189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48503663_48514653_48514862_48516104
Isoform_75327_7	chr9	-	890	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	140	13	64	1	multi-exon	FALSE	canonical	3	43	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTCTCTGAATGCAG	NA	False	NA	-3	True	ATTAAA	-20	NA	48516313	48503189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_48503663_48514653_48514862_48516104
Isoform_75329_34	chr9	-	2272	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	52	1304	42	-1304	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGATGTCTGCCGGGT	NA	False	NA	-3	True	AATAAA	-24	NA	49397473	49349566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
Isoform_75330_6	chr9	-	2122	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-28	-601	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCTCTTGCCATCA	8489	False	NA	NA	False	AATAGA	-19	NA	49710253	49443176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_75331_5	chr9	-	2735	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	8477	False	NA	NA	False	AATAAA	-22	NA	49710265	49442575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_75332_3	chr9	-	5020	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-19	2306	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATCCGTTGGTGCTTTC	8498	False	NA	NA	False	AATAAA	-18	NA	49710244	49440269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
Isoform_75333_11	chr9	-	1137	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7955	False	NA	NA	False	AATAAA	-18	NA	50439955	50432916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
Isoform_75335_19	chr9	-	1050	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	-4	0	1	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7955	False	NA	NA	False	AATAAA	-18	NA	50439955	50432916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
Isoform_75336_5	chr9	-	911	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-16	0	-1	0	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATTTCCATTTGATT	6961	False	NA	NA	False	AATAAA	-21	NA	50472626	50468224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
Isoform_75337_3	chr9	-	1018	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-15	-108	0	2	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTATTTTTTTATT	6962	False	NA	NA	False	AATAAA	-17	NA	50472625	50468116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
Isoform_75339_327	chr9	-	1248	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	-5	-12	-5	12	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTACTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	50515117	50507644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
Isoform_75341_6	chr9	-	1293	5	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	697.644967014025	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATACATTGTACTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	50515112	50507647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_50508551_50510060_50510206_50510767_50510821_50511847_50511965_50515037
Isoform_75342_4	chr9	-	2883	3	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	1	11	intron_retention	FALSE	canonical	3	1351	junction_2	56.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTGTACTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	50515111	50507645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_50508551_50510060_50511965_50515037
Isoform_75345_3	chr9	-	3128	7	FSM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	210	1	10	-1	multi-exon	FALSE	canonical	2	5	junction_6	47.355921840181	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTGCTCTGTTACTT	116	False	NA	-8	True	AATAAA	-12	NA	50528554	50516544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50527985_50528527
Isoform_75352_247	chr9	-	2620	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	267	1148	267	747	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTTGTAGAAGTGGAGC	NA	False	NA	-1	True	AATAAA	-22	NA	50570813	50547080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_75354_29	chr9	-	3612	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	283	140	283	-140	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTCTCAGGTAAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	50570797	50546072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_75356_16	chr9	-	3777	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	5	253	-5	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATGTTTGATCTGTTGG	NA	False	NA	-6	True	ATTAAA	-21	NA	50570827	50545937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
Isoform_7536_86	chr11	-	3279	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_75365_4	chr9	-	1023	7	ISM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	74	30830	-18	60	5prime_fragment	FALSE	canonical	3	46	junction_1	1.77169096878911	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATGGAGGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	50639293	50604885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
Isoform_75366_7	chr9	-	1248	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATTGATTGTTCCTG	2125	False	NA	NA	False	AATAAA	-17	NA	50657827	50650990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
Isoform_75367_6	chr9	-	848	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	-75	0	-14	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	50663668	50662377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50663034_50663476
Isoform_75368_11	chr9	-	887	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	297	898	5	1	multi-exon	TRUE	canonical	3	19	junction_2	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTCTATTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	50679455	50675025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
Isoform_75369_4	chr9	-	4203	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-106	10	-16	-10	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCAATATGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	50920342	50804110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
Isoform_75370_47	chr9	-	950	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-75	0	-65	0	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	962	False	NA	-5	True	AATAAA	-17	NA	51874921	51854605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
Isoform_75376_6	chr9	-	1225	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-72	-278	-62	278	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTTAGCATCTTGTT	965	False	NA	NA	False	AAGAAA	-3	NA	51874918	51854327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
Isoform_75377_4	chr9	-	2165	12	NIC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-29	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	94.7728035752909	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATTGTTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	53159382	53009938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_53010563_53028452_53028590_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
Isoform_75378_6	chr9	-	2306	15	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-38	58574	-38	-58574	5prime_fragment	FALSE	canonical	3	249	junction_5	29.2579136338202	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAATACAGGAAGAAA	NA	False	NA	40	True	NA	NA	NA	53159391	53068508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
Isoform_75383_7	chr9	-	715	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-3	5251	-3	96	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACGACTCAGAGTTTAAT	NA	False	NA	-3	True	AATAAA	-17	NA	53447976	53438397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
Isoform_75384_12	chr9	-	2202	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	30	1173	-22	792	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTAAAAAATATGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	53521652	53492994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
Isoform_75386_131	chr9	-	1525	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	32	1848	-20	117	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTTTTTGTAAACT	NA	False	NA	-21	True	AATAAA	-18	NA	53521650	53493669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
Isoform_75387_3	chr9	-	3658	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-4	-135	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAATGAGCAGGAGAGT	NA	False	NA	-27	True	ATTAAA	-24	NA	53578791	53528458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
Isoform_75389_20	chr9	-	3437	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	24	124	0	-124	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGAGTTCTGTTTAGTT	NA	False	NA	-16	True	ATTAAA	-35	NA	53578787	53528447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_7539_68	chr11	-	3267	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_16	418.197765529361	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_75390_3	chr9	-	5929	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	22	-2366	-2	-76	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCATCTATCCAGA	NA	False	NA	-19	True	AATAAA	-12	NA	53578789	53525957	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_75392_6	chr9	-	3151	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	433	1	-6	-1	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGTGTGGGTATAC	NA	False	NA	56	True	AATGAA	-13	NA	53578378	53528324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_75394_6	chr9	-	3487	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	34	64	10	-64	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGTACGGCTGGAGAG	NA	False	NA	-7	True	GATAAA	-21	NA	53578777	53528387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_75396_3	chr9	-	3561	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	25	-1	1	1	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTGGGTATACGT	NA	False	NA	58	True	AATGAA	-15	NA	53578786	53528322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
Isoform_754_142	chr10	-	1110	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-3	-4	-2	3	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	0	True	ATTAAA	-20	NA	31321853	31208368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_75405_3	chr9	-	763	6	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	77	-28	combination_of_known_junctions	FALSE	canonical	3	65	junction_5	148.916620966231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAGAATTCAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	53581237	53553979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
Isoform_75406_3	chr9	-	2661	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-41	22157	14	1	5prime_fragment	TRUE	canonical	3	29	junction_1	10.0950345329881	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTGGTTGGTAGTTGG	6946	False	NA	NA	False	AATAAA	-19	NA	54408896	54352613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
Isoform_75407_3	chr9	-	2701	14	FSM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	172	7	-3	-7	multi-exon	FALSE	canonical	0	0	junction_5	2.25320284859643	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTACCGGATGTCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	54568982	54512167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_54512761_54516299_54516547_54516978_54517119_54522019_54522238_54523150_54523382_54525305_54525488_54529149_54529327_54529720_54529871_54529959_54530041_54534714_54534836_54535153_54535243_54535689_54535911_54549879_54549981_54568832
Isoform_75408_20	chr9	-	1253	11	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	332.004593341719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5460	False	NA	-1	True	AATAAA	-21	NA	54641764	54624440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641652
Isoform_75409_13	chr9	-	1179	11	FSM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	-15	-2	5	2	multi-exon	FALSE	canonical	3	105	junction_9	343.30050975785	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641758
Isoform_75411_179	chr9	-	1259	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	37	-6	0	1	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	5458	False	NA	-2	True	AATAAA	-20	NA	54641766	54624441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
Isoform_75412_253	chr9	-	1184	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	5	-2	5	2	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5428	False	NA	-1	True	AATAAA	-21	NA	54641796	54624440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
Isoform_75417_1174	chr9	-	1316	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	81	-5	-42	5	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	-8	True	AATAAA	-35	NA	55419446	55361786	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
Isoform_75418_29	chr9	-	1369	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	26	-3	26	3	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATCAGAAACATGCCTA	NA	False	NA	-10	True	AATAAA	-33	NA	55419501	55361788	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
Isoform_7542_32	chr11	-	3317	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_16	423.912869695826	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_75427_3	chr9	-	2158	17	ISM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-28	266809	-10	-73059	5prime_fragment	FALSE	canonical	3	40	junction_8	11.1663557170636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAAGCAAGCTCGTG	NA	False	NA	NA	False	AATGAA	-27	NA	55845413	55723971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
Isoform_7543_54	chr11	-	3276	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_16	435.971934123918	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_75430_193	chr9	-	1612	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	104	0	-33	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068237	56043167	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
Isoform_75433_7	chr9	-	2461	4	ISM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	53559	-37	1869	5prime_fragment	FALSE	canonical	3	31	junction_1	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCACAAGCGTAATAA	NA	False	NA	NA	False	NA	NA	NA	56325388	56165971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_56168047_56225946_56226105_56281659_56281724_56325224
Isoform_75434_6	chr9	-	2784	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-47	45	-47	-28	multi-exon	TRUE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAAGAAAAAAAC	6176	False	NA	NA	False	NA	NA	NA	56542959	56526416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_56528600_56542358
Isoform_75435_10	chr9	-	1692	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	2	-1	2	1	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGGTACTTCTTGGG	NA	False	NA	-10	True	AATAAA	-6	NA	57055409	57050082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
Isoform_75436_7	chr9	-	1705	10	NNC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.1010071178409	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTCTTGGTACTTCTT	NA	False	NA	-13	True	AATAAA	-3	NA	57055427	57050085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052500_57053884_57054342_57055367
Isoform_75437_4	chr9	-	1935	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	0	6	0	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6331	False	NA	-6	True	AATAAA	-13	NA	57065561	57062324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
Isoform_75439_264	chr9	-	838	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	19	1	4	-1	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6296	False	NA	-5	True	AATAAA	-14	NA	57065596	57062323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
Isoform_75440_8	chr9	-	775	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	406.295322258193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6292	False	NA	-6	True	AATAAA	-13	NA	57065600	57062324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064350_57064423_57065555
Isoform_75441_6	chr9	-	1262	7	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	417.286871748122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6292	False	NA	-5	True	AATAAA	-14	NA	57065600	57062323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57064047_57064071_57064423_57065555
Isoform_75443_42	chr9	-	4132	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	20	0	5	0	multi-exon	FALSE	canonical	3	41	junction_1	39.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169875	57160399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57161613_57163668_57166424_57169711
Isoform_75444_6	chr9	-	3640	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	-2	514	-2	-21	multi-exon	FALSE	canonical	3	41	junction_1	39.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGCTTCTTGCCCGG	NA	False	NA	NA	False	AATACA	-12	NA	57169897	57160913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57161613_57163668_57166424_57169711
Isoform_75445_4	chr9	-	3714	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	-2	440	-2	53	multi-exon	FALSE	canonical	3	41	junction_1	39.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGTCAAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	57169897	57160839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57161613_57163668_57166424_57169711
Isoform_75446_18	chr9	-	1434	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	0	1310	0	-2	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGACTGTGTCCTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	57347379	57321245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
Isoform_75448_3	chr9	-	1211	5	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	55.6169938058504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347379	57321243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57322010_57322368_57322538_57342185_57342369_57344699_57344766_57347352
Isoform_75449_49	chr9	-	1650	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	13	2	2	-2	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGACTGTGTCCTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	57347377	57321245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
Isoform_75451_4	chr9	-	2145	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	11	-491	0	491	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATGGTTCAGTGTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	57347379	57320752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
Isoform_75452_5	chr9	-	1427	5	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	57.2996509587973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGACTGTGTCCTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	57347379	57321245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57322010_57322368_57322756_57342185_57342369_57344699_57344766_57347352
Isoform_75454_26	chr9	-	3338	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	6	-2319	4	0	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375337	57348609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
Isoform_75455_79	chr9	-	3185	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	40	0	19	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375301	57348609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
Isoform_75456_17	chr9	-	3271	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	-46	0	-44	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375387	57348609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
Isoform_75458_39	chr9	-	3180	6	NIC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375336	57348609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
Isoform_75460_114	chr9	-	3068	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-21	-2372	0	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375341	57348609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
Isoform_75461_41	chr9	-	3112	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-64	-2373	-41	1	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCTGTGTTACTTGTC	NA	False	NA	1	True	AATAAA	-21	NA	57375384	57348608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
Isoform_75465_149	chr9	-	1755	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	20	5	20	-5	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGAGCAGTCAGCCTTT	8971	False	NA	-13	True	ATTAAA	-25	NA	57460026	57451543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
Isoform_75467_5	chr9	-	1573	7	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	20	-13	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	97.3077877436105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGAGTGAAGAGCAGT	8971	False	NA	-21	True	ATTAAA	-17	NA	57460026	57451551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57452222_57452477_57452687_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
Isoform_75468_36	chr9	-	2781	14	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552917	57533928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
Isoform_75472_353	chr9	-	2728	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	21	0	-15	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552915	57533928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
Isoform_75473_65	chr9	-	2751	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	-2	0	-2	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552938	57533928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
Isoform_75479_8	chr9	-	2584	15	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_12	48.2386181986413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGCCTCGGCGCTTCC	NA	False	NA	-27	True	AATAAA	-21	NA	57560758	57533930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57559849_57559986_57560559
Isoform_75480_15	chr9	-	2446	14	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	43.0998565326625	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57560754	57533928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57560559
Isoform_75485_19	chr9	-	2532	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	-39	3	-39	0	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9029	False	NA	-12	True	AATAAA	-18	NA	57673182	57657994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75486_4	chr9	-	2673	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	-178	1	-178	-1	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	8890	False	NA	-10	True	AATAAA	-20	NA	57673321	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75487_26	chr9	-	1838	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	746	-88	0	3	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9814	False	NA	-8	True	AATAAA	-19	NA	57672397	57657903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75488_152	chr9	-	1751	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	744	1	-2	-1	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9812	False	NA	-10	True	AATAAA	-20	NA	57672399	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75489_3	chr9	-	2623	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	-39	-88	-39	3	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9029	False	NA	-8	True	AATAAA	-19	NA	57673182	57657903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75491_5	chr9	-	3835	12	FSM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	1	88	1	0	multi-exon	FALSE	canonical	3	243	junction_11	42.6560334546315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9826	False	NA	-12	True	AATAAA	-18	NA	57672385	57657994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
Isoform_75492_17	chr9	-	1747	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.6423820070677	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9814	False	NA	-10	True	AATAAA	-20	NA	57672397	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666005_57668106_57668324_57668998_57669151_57672356
Isoform_75493_6	chr9	-	1836	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.6423820070677	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9814	False	NA	-8	True	AATAAA	-19	NA	57672397	57657903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666005_57668106_57668324_57668998_57669151_57672356
Isoform_75494_16	chr9	-	1655	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9811	False	NA	-10	True	AATAAA	-20	NA	57672400	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_75495_3	chr9	-	1753	11	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	36	junction_8	95.2711918682662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9813	False	NA	-10	True	AATAAA	-20	NA	57672398	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_75496_19	chr9	-	2364	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	0	-1	0	-1	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9814	False	NA	-10	True	AATAAA	-20	NA	57672397	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75497_6	chr9	-	2453	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	0	-90	0	3	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9814	False	NA	-8	True	AATAAA	-19	NA	57672397	57657903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
Isoform_75498_6	chr9	-	2265	11	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_8	95.4897376685055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9814	False	NA	-12	True	AATAAA	-18	NA	57672397	57657994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_75499_4	chr9	-	2369	10	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	36	junction_7	100.304105500458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTACCAGTGTGT	9812	False	NA	-10	True	AATAAA	-20	NA	57672399	57657992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
Isoform_75501_5	chr9	-	4085	9	FSM	ENSMUSG00000004661.16	ENSMUST00000171444.8	4171	9	-68	154	-6	3	multi-exon	FALSE	canonical	2	19	junction_8	71.7791752529938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	57744059	57697792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743758
Isoform_75502_4	chr9	-	4240	9	FSM	ENSMUSG00000004661.16	ENSMUST00000171444.8	4171	9	-68	-1	-6	1	multi-exon	FALSE	canonical	2	19	junction_8	71.7791752529938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTATGGGATCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57744059	57697637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743758
Isoform_75503_118	chr9	-	3889	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	5	1	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	57744071	57697794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_75504_80	chr9	-	4039	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744062	57697635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_75505_13	chr9	-	3951	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-55	3	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	57744131	57697792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_75506_12	chr9	-	4094	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-41	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744117	57697635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_75508_6	chr9	-	3153	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4216	0	intron_retention	FALSE	canonical	3	7	junction_5	89.1748843565272	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	57707720	57697795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707586
Isoform_75509_3	chr9	-	3318	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4223	1	intron_retention	FALSE	canonical	3	7	junction_5	89.1748843565272	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTATGGGATCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57707727	57697637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707586
Isoform_75510_3	chr9	-	3107	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4540	2	intron_retention	FALSE	canonical	3	5	junction_5	89.9653266542172	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGTGA	NA	False	NA	NA	False	NA	NA	NA	57708044	57697793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707958
Isoform_75511_14	chr9	-	1965	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	5	-1	5	0	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57744071	57701968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
Isoform_75513_4	chr9	-	4133	4	NIC	ENSMUSG00000051243.15	novel	4303	4	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGAGATTTTTGGGGT	7161	False	NA	1	True	AATAAA	-20	NA	58111664	58103579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_58107267_58107554_58107745_58108562_58108656_58111501
Isoform_75514_17	chr9	-	3924	2	FSM	ENSMUSG00000051243.15	ENSMUST00000163200.3	4123	2	193	6	46	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACTCGGTGAGATTTT	NA	False	NA	-5	True	AATAAA	-14	NA	58108805	58103585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58107267_58108562
Isoform_75516_3	chr9	-	3893	3	FSM	ENSMUSG00000051243.15	ENSMUST00000215950.2	4109	3	219	-3	120	-1	multi-exon	FALSE	canonical	2	3	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGGTGAGATTTTTGGG	9476	False	NA	-1	True	AATAAA	-18	NA	58109349	58103581	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58107267_58108562_58108656_58109234
Isoform_75517_15	chr9	-	3823	3	FSM	ENSMUSG00000051243.15	ENSMUST00000215950.2	4109	3	284	2	185	-2	multi-exon	FALSE	canonical	2	3	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACTCGGTGAGATTT	9541	False	NA	-6	True	AATAAA	-13	NA	58109284	58103586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58107267_58108562_58108656_58109234
Isoform_75518_20	chr9	-	3875	3	FSM	ENSMUSG00000051243.15	ENSMUST00000114144.9	3880	3	0	5	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACTCGGTGAGATTTT	7223	False	NA	-5	True	AATAAA	-14	NA	58111602	58103585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58107267_58108562_58108656_58111501
Isoform_75520_7	chr9	-	3859	3	NNC	ENSMUSG00000051243.15	novel	4109	3	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGACTCGGTGAGATT	9545	False	NA	-7	True	AATAAA	-12	NA	58109280	58103587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58107267_58108562_58108656_58109193
Isoform_75521_10	chr9	-	4007	9	FSM	ENSMUSG00000036986.17	ENSMUST00000135310.8	4413	9	-49	455	4	1	multi-exon	FALSE	canonical	3	33	junction_1	114.3314807916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2155	False	NA	-12	True	NA	NA	NA	58157065	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75523_10	chr9	-	3820	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	-68	454	0	1	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2204	False	NA	-12	True	NA	NA	NA	58157016	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75528_18	chr9	-	4487	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	-14	8	-14	2	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAACATTCTGATTGC	2137	False	NA	-9	True	AGTAAA	-15	NA	58157083	58125366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75529_87	chr9	-	3990	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	26	465	26	1	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2177	False	NA	-12	True	NA	NA	NA	58157043	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75532_30	chr9	-	4447	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	26	8	26	2	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAACATTCTGATTGC	2177	False	NA	-9	True	AGTAAA	-15	NA	58157043	58125366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75535_6	chr9	-	3863	9	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	115.161232083545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2183	False	NA	-13	True	NA	NA	NA	58157037	58125824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
Isoform_75541_45	chr9	-	3877	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	1	465	1	1	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2152	False	NA	-12	True	NA	NA	NA	58157068	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75542_12	chr9	-	4336	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	4	3	4	-3	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2155	False	NA	-4	True	AGTAAA	-20	NA	58157065	58125361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75549_16	chr9	-	2372	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	25	255	25	-255	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTAATCTACTCTTG	2176	False	NA	NA	False	NA	NA	NA	58157044	58128587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75552_13	chr9	-	2238	7	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	28	3222	-25	-248	5prime_fragment	FALSE	canonical	3	178	junction_3	76.1389446268392	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTACTCTTGACCTTTG	2179	False	NA	NA	False	NA	NA	NA	58157041	58128580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75553_6	chr9	-	2502	7	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	28	2958	-25	16	5prime_fragment	FALSE	canonical	3	178	junction_3	76.1389446268392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAAAAAAAAACAAA	2179	False	NA	21	True	NA	NA	NA	58157041	58128316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_75559_17	chr9	-	2445	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	-11	863	-11	-863	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTGTGCCCTGTGGT	9346	False	NA	NA	False	AATAAA	-22	NA	58220480	58195883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
Isoform_75561_94	chr9	-	3299	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	301	3	301	-1	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTGGCCTGTGATG	403	False	NA	-6	True	AATAAA	-16	NA	58462419	58431583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_75562_17	chr9	-	3373	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	230	0	230	0	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	332	False	NA	-3	True	AATAAA	-19	NA	58462490	58431580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_75563_14	chr9	-	3423	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	177	3	177	-1	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTGGCCTGTGATG	279	False	NA	-6	True	AATAAA	-16	NA	58462543	58431583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_75564_4	chr9	-	3537	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	63	3	63	-1	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTGGCCTGTGATG	165	False	NA	-6	True	AATAAA	-16	NA	58462657	58431583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
Isoform_75566_79	chr9	-	864	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-7	26	-7	-1	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTTTTATCAATGTTT	9043	False	NA	-9	True	AATAAA	-14	NA	58648849	58560164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
Isoform_75567_3	chr9	-	2189	7	ISM	ENSMUSG00000032340.9	ENSMUST00000217545.2	3639	15	-21	43115	-7	-36802	5prime_fragment	FALSE	canonical	3	118	junction_6	6.77413381096719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGGAAAAAAATAAA	NA	False	NA	NA	False	AAAAAG	-5	NA	58943731	58862696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
Isoform_75568_32	chr9	-	2692	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-57	4336	-53	519	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTATTTGCTGTGCA	NA	False	NA	-8	True	AAAAAG	-9	NA	59393954	59299876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
Isoform_75569_26	chr9	-	5166	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-42	1847	-38	-1847	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTACTTATGTTTATT	NA	False	NA	-4	True	AATAAA	-24	NA	59393939	59297387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
Isoform_75577_4	chr9	-	3113	9	ISM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-42	17834	-38	-11122	5prime_fragment	FALSE	canonical	3	295	junction_1	34.4855042010408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATACCAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59393939	59313374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
Isoform_75578_3	chr9	-	1533	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	2037	0	-20	multi-exon	FALSE	canonical	3	14	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6429	False	NA	-42	True	NA	NA	NA	59657921	59643772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_59645152_59647222_59647316_59657860
Isoform_75579_3	chr9	-	2168	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	11	1503	0	708	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAGGAAAAAAAAAA	6429	False	NA	NA	False	NA	NA	NA	59657921	59643044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_59645152_59657860
Isoform_7558_24	chr11	-	3236	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-8998	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	429.757988743536	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	426	False	NA	-9	True	AATAAA	-19	NA	106615218	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615188
Isoform_75580_16	chr9	-	1429	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	22	2231	0	-20	multi-exon	FALSE	canonical	3	38	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAACAAAACC	6440	False	NA	-42	True	NA	NA	NA	59657910	59643772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_59645152_59657860
Isoform_75581_3	chr9	-	2090	9	ISM	ENSMUSG00000047766.16	ENSMUST00000053171.14	3086	10	-30	18066	-30	1	5prime_fragment	FALSE	canonical	3	10	junction_2	5.65132727772866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	60557114	60494520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762
Isoform_75582_6	chr9	-	1979	9	ISM	ENSMUSG00000047766.16	ENSMUST00000053171.14	3086	10	81	18066	-10	1	5prime_fragment	FALSE	canonical	3	10	junction_2	5.65132727772866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	60557003	60494520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762
Isoform_75583_3	chr9	-	2996	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	10	11	10	-1	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTCCAGTTT	3505	False	NA	NA	False	AATAAA	-10	NA	60595431	60494522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
Isoform_75584_5	chr9	-	2814	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	192	11	-63	-1	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTCCAGTTT	3687	False	NA	NA	False	AATAAA	-10	NA	60595249	60494522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
Isoform_75586_5008	chr9	-	497	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	3	-1	3	1	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	5008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821821	61820564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61820804_61821169_61821245_61821638
Isoform_75587_59	chr9	-	561	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	-61	-1	-61	1	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTGGTCTCACTTGT	NA	False	NA	-27	True	AATAAA	-15	NA	61821885	61820564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61820804_61821169_61821245_61821638
Isoform_7559_120	chr11	-	3256	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_75591_10	chr9	-	3404	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854019	61824560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_75594_17	chr9	-	3399	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	0	-1	0	1	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854056	61824560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_75595_28	chr9	-	3362	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	37	-1	0	1	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854019	61824560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_75597_11	chr9	-	3089	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGTGTGGTGGCCA	NA	False	NA	-5	True	AATAAA	-16	NA	61854019	61824563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_75598_17	chr9	-	3087	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854056	61824560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
Isoform_756_7	chr10	-	892	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-96	307	8	-27	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTGGAGTATTTACAAA	NA	False	NA	-2	True	AATAAA	-34	NA	31321946	31208679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_75605_49	chr9	-	4911	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	-68	7	-23	-7	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGTACTTGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	62029960	61964536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
Isoform_75606_3	chr9	-	1951	3	FSM	ENSMUSG00000032252.15	ENSMUST00000185510.2	1922	3	-24	-5	22	5	multi-exon	FALSE	canonical	3	22	junction_1	70	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGTGTCTGTTTCTAA	NA	False	NA	NA	False	AATAAA	-19	NA	62029915	61987596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61989308_61995710_61995802_62029766
Isoform_75607_26	chr9	-	3357	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	252	1	168	-1	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGTATCAAGCCATGT	9610	False	NA	-8	True	AATAAA	-18	NA	62444074	62326774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_75608_15	chr9	-	3614	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	0	-4	0	4	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAAGCCATGTTTTCA	9358	False	NA	-3	True	AATAAA	-23	NA	62444326	62326769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_75609_16	chr9	-	3576	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	33	1	33	-1	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGTATCAAGCCATGT	9391	False	NA	-8	True	AATAAA	-18	NA	62444293	62326774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
Isoform_75611_13	chr9	-	3260	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	12632	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	15.3332135580422	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCATGTATCAAGCCAT	NA	False	NA	-10	True	AATAAA	-16	NA	62405148	62326776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62405103
Isoform_75612_8	chr9	-	6781	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-6	10	-6	-10	multi-exon	FALSE	canonical	3	242	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTACCTTGAAGTT	NA	False	NA	-15	True	AGTAAA	-8	NA	62719222	62699112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62705011_62718339
Isoform_75613_63	chr9	-	2579	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	0	4206	0	-4206	multi-exon	FALSE	canonical	3	242	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTGTTTGTAAATT	NA	False	NA	NA	False	AGTAAA	-22	NA	62719216	62703308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62705011_62718339
Isoform_75617_8	chr9	-	6472	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	303	10	303	-10	multi-exon	FALSE	canonical	3	242	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTACCTTGAAGTT	NA	False	NA	-15	True	AGTAAA	-8	NA	62718913	62699112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62705011_62718339
Isoform_75619_8	chr9	-	4569	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTGTTCTGTAAAAT	NA	False	NA	-1	True	AATAAA	-16	NA	62888165	62785650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
Isoform_7562_70	chr11	-	3244	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	360.787927859136	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_75623_101	chr9	-	2196	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-1	3369	-1	1143	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	TATAAA	-35	NA	62888162	62789018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
Isoform_75628_4	chr9	-	1394	2	ISM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	0	67963	0	-27936	5prime_fragment	FALSE	canonical	3	108	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAACAGAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	62888165	62858124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_62859483_62888129
Isoform_75629_29	chr9	-	2281	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	29	0	4	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285155	63071049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_75630_71	chr9	-	2109	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	201	0	176	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284983	63071049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_75631_7	chr9	-	2349	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	-41	2	-41	-2	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	False	NA	-3	True	AATAAA	-16	NA	63285225	63071051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_75633_6	chr9	-	2024	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	190	-3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGCGTTTGTCTCAGCA	NA	False	NA	-4	True	AATAAA	-15	NA	63284969	63071052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
Isoform_75634_3	chr9	-	2237	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	False	NA	-3	True	AATAAA	-16	NA	63285181	63071051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
Isoform_75635_3	chr9	-	2064	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	194	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	19.7661326515836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284965	63071049	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
Isoform_75636_33	chr9	-	637	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	-42	0	-37	0	multi-exon	FALSE	canonical	3	56	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	False	NA	-11	True	AATAAA	-15	NA	63306565	63301728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63301958_63306157
Isoform_75638_9	chr9	-	5273	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	-183	0	-183	0	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTGCTGCTGTCTCTG	2100	False	NA	-2	True	AATAAA	-40	NA	63665459	63554048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
Isoform_75644_6	chr9	-	2972	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	0	-1	0	1	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTCTTACAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	63929341	63860356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
Isoform_75650_168	chr9	-	2763	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	191	3	0	-3	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080195	64044428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
Isoform_75653_6	chr9	-	2865	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	406.540652258859	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGCCTGGTTTAATCT	NA	False	NA	-1	True	ACTAAA	-19	NA	64080177	64044426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
Isoform_75654_3	chr9	-	2663	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	392.146263582254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080189	64044428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
Isoform_7566_58	chr11	-	3294	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_75660_931	chr9	-	2388	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	26	22	26	-22	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGGGACAAGAGAT	NA	False	NA	-35	True	AATAAA	-16	NA	64160887	64093073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
Isoform_75661_54	chr9	-	2470	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	-56	22	-56	-22	multi-exon	FALSE	canonical	3	469	junction_6	51.6454257412987	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGGGACAAGAGAT	NA	False	NA	-35	True	AATAAA	-16	NA	64160969	64093073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
Isoform_75671_17	chr9	-	3300	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	28	247	28	8	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTTCTTTCTTCC	5115	False	NA	5	True	ATTAAA	-21	NA	64248511	64214284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_75672_3	chr9	-	3624	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	-20	1	-20	-1	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGGCTCAAATTGATT	5036	False	NA	NA	False	NA	NA	NA	64248590	64214039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_75673_8	chr9	-	3377	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	-18	246	-18	8	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTTCTTTCTTCC	5038	False	NA	5	True	ATTAAA	-21	NA	64248588	64214284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_75674_8	chr9	-	3470	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	104	1	0	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	5191	False	NA	NA	False	NA	NA	NA	64248435	64214038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_75675_4	chr9	-	3517	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	57	1	-44	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	5144	False	NA	NA	False	NA	NA	NA	64248482	64214038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
Isoform_75678_40	chr9	-	2327	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	7	2	-7	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTGTGGTGAGATT	NA	False	NA	-9	True	AATAAA	-14	NA	64645038	64622587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
Isoform_75679_155	chr9	-	1029	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	1305	2	1	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGTTTACTCTTCATC	NA	False	NA	-3	True	AATAAA	-21	NA	64645038	64623885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
Isoform_7568_27	chr11	-	3269	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9039	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	384.021504027516	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	385	False	NA	-9	True	AATAAA	-19	NA	106615259	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_75684_400	chr9	-	2725	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-17	1	-17	-1	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGTGCTTAAACATC	NA	False	NA	-2	True	ATTAAA	-22	NA	64928992	64894265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
Isoform_75689_41	chr9	-	3307	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	-35	1	-35	-1	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGGCCCAAGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	65487357	65461666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
Isoform_7569_49	chr11	-	3241	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9011	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	384.021504027516	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	413	False	NA	-9	True	AATAAA	-19	NA	106615231	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_75690_22	chr9	-	2403	5	ISM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	2	11110	2	-3631	5prime_fragment	FALSE	canonical	3	14	junction_2	1.29903810567666	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGACAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65734844	65610782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
Isoform_75691_4	chr9	-	2565	5	ISM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-163	11113	-163	-3634	5prime_fragment	FALSE	canonical	3	14	junction_2	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65735009	65610785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
Isoform_75692_5	chr9	-	4005	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	11	-2017	10	-3	multi-exon	TRUE	canonical	3	144	junction_4	28.3474229673332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACAAGACTCAGTTTC	NA	False	NA	NA	False	AGTAAA	-27	NA	65792327	65738420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_75695_34	chr9	-	3393	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	-1394	0	-3	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGGTTGGAAGTTC	NA	False	NA	-14	True	AATAAA	-25	NA	65792338	65739043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_75699_4	chr9	-	3267	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	15	633	15	-10	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAAAGAAGGGGTTG	NA	False	NA	-21	True	AATAAA	-18	NA	65792322	65739050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
Isoform_757_6	chr10	-	1180	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-77	0	27	0	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31321927	31208372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
Isoform_75701_299	chr9	-	1951	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	111	11	22	-11	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032057	65995425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_75702_169	chr9	-	2013	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	49	11	-40	-11	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032119	65995425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_75703_44	chr9	-	2066	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	-4	11	-4	-11	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032172	65995425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
Isoform_75704_9	chr9	-	1926	15	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	103.740477802514	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66033868	65995425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66033724
Isoform_75706_8	chr9	-	2026	16	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	22	-11	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	132.531187105359	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTCACAGGACTGG	NA	False	NA	-15	True	AATAAA	-9	NA	66032057	65995425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66023732_66023808_66031888
Isoform_75707_5	chr9	-	3880	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	130	1597	-6	0	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGGTTGAGTGTCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	66500294	66423515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_75708_41	chr9	-	2207	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	180	3220	-4	20	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66500244	66425138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_75709_10	chr9	-	1782	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	123	3702	-13	69	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTATGCACTTTTC	NA	False	NA	-8	True	CATAAA	-19	NA	66500301	66425620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_7571_16	chr11	-	3251	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_15	413.292385068435	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
Isoform_75710_3	chr9	-	1878	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	27	3702	27	69	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTATGCACTTTTC	NA	False	NA	-8	True	CATAAA	-19	NA	66500397	66425620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_75711_3	chr9	-	2130	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	37	630	1	20	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66500281	66425138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_75712_4	chr9	-	1649	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	36	1112	0	69	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTATGCACTTTTC	NA	False	NA	-8	True	CATAAA	-19	NA	66500282	66425620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
Isoform_75714_4	chr9	-	1221	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	57	3927	-21	363	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCGTAGCCCTTGTCTT	NA	False	NA	-2	True	AGTAAA	-16	NA	66741951	66726202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
Isoform_75715_4	chr9	-	4666	9	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	38	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.1779399272855	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATTATGACTCTTAA	7789	False	NA	-8	True	AATAAA	-14	NA	66826931	66750952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_66752473_66752494_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
Isoform_75716_11	chr9	-	1928	7	NNC	ENSMUSG00000032370.9	novel	2031	6	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.8379948821204	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAAGGCACTTTTCA	NA	False	NA	NA	False	AATAAA	-9	NA	66882701	66862676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_66862842_66862877_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
Isoform_75719_21	chr9	-	1753	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-148	2	12	-1	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGTGGTCCTGTCG	NA	False	NA	-4	True	AATAAA	-22	NA	66951232	66929875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_7572_16	chr11	-	3294	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9036	0	at_least_one_novel_splicesite	TRUE	canonical	3	95	junction_15	411.802671190948	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	388	False	NA	-9	True	AATAAA	-19	NA	106615256	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615168
Isoform_75720_24	chr9	-	1557	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	50	0	-19	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951034	66929873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75722_79	chr9	-	1661	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	51	2	-15	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951138	66929873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75727_11	chr9	-	1743	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-32	3	23	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951221	66929874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75729_5	chr9	-	1103	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	32	-8	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951157	66935255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75731_7	chr9	-	988	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTTTACTCCTTATT	NA	False	NA	-6	True	AATAAA	-23	NA	66951032	66935245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75732_4	chr9	-	1139	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-97	-155	11	-1	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951112	66935174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75733_18	chr9	-	998	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-37	-74	8	-8	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951052	66935255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75735_13	chr9	-	1206	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-245	-74	-16	-8	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951260	66935255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75737_6	chr9	-	2656	8	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	-25	-8	intron_retention	FALSE	canonical	3	209	junction_4	194.584329339466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951214	66935255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75739_4	chr9	-	2731	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTACTTTTTTATT	NA	False	NA	1	True	AATAAA	-22	NA	66951207	66935173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75741_4	chr9	-	1698	8	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-117	802	-9	-2	5prime_fragment	FALSE	canonical	3	256	junction_1	130.784134343269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTTGGAAGTTAGTG	NA	False	NA	-11	True	AATAAA	-13	NA	66951132	66936131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
Isoform_75745_6	chr9	-	3711	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-10	2	-10	-2	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGGCATGGGACT	NA	False	NA	-22	True	AATAAA	-17	NA	70048870	69995794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_75747_26	chr9	-	2308	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	57	1338	57	-1338	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGCCTTGGTTTTT	NA	False	NA	-34	True	NA	NA	NA	70048803	69997130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_75749_57	chr9	-	3595	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	106	2	106	-2	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGGCATGGGACT	NA	False	NA	-22	True	AATAAA	-17	NA	70048754	69995794	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_7575_40	chr11	-	3202	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_75759_7	chr9	-	1681	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-35	2057	-35	-2057	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCCTAAGTGCAGTT	NA	False	NA	-12	True	AATACA	-13	NA	70048895	69997849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
Isoform_7576_30	chr11	-	3190	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_75762_360	chr9	-	1432	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	2	97	2	-97	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGTATGTTTGTAT	NA	False	NA	-2	True	AATAAA	-20	NA	70328827	70315070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
Isoform_75763_296	chr9	-	1530	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	1	0	1	0	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328828	70314973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
Isoform_75768_7	chr9	-	4900	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-44	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2202	False	NA	-15	True	AATAAA	-19	NA	70411051	70332707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_75769_4	chr9	-	4835	14	NIC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	3	148	junction_8	58.7438527565769	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2204	False	NA	-15	True	AATAAA	-19	NA	70411049	70332707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_75772_6	chr9	-	4926	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTTCATAATTAGT	2180	False	NA	-14	True	AATAAA	-20	NA	70411073	70332706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
Isoform_75773_9	chr9	-	4812	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2232	False	NA	-13	True	AATAAA	-21	NA	70411021	70332705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_75775_5	chr9	-	4838	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-15	1	combination_of_known_junctions	TRUE	canonical	3	68	junction_2	77.5959798873276	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTCATAATTAGTGT	2231	False	NA	-12	True	AATAAA	-22	NA	70411022	70332704	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_75777_3	chr9	-	3512	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-50	253	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	77.5959798873276	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGACATTACTTCCTGT	2196	False	NA	NA	False	TATAAA	-18	NA	70411057	70334065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
Isoform_7578_21	chr11	-	3240	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	462.558633900523	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_75781_39	chr9	-	2526	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	1	5554	1	-20	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	70564455	70511849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_75782_5	chr9	-	2553	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-26	5554	-26	-20	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	70564482	70511849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_75785_4	chr9	-	2650	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-130	5561	-130	-27	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70564586	70511856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
Isoform_75786_10	chr9	-	992	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118030	118	117835	-74	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTGCCTTATTTGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	70724060	70705527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
Isoform_75788_6	chr9	-	1067	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118030	43	117835	1	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGGGTGTGCTTTGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	70724060	70705452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
Isoform_7579_19	chr11	-	3199	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	475.283288241479	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_75793_29	chr9	-	2712	4	FSM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	-573	-1	374	1	multi-exon	FALSE	canonical	3	31	junction_3	1098.58130736368	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCGAGCTCATGGCGA	2874	False	NA	-32	True	AATAAA	-16	NA	71392813	71385751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016
Isoform_75795_242	chr9	-	2189	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-20	31	-20	3	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCATGGCGATG	2450	False	NA	-30	True	AATAAA	-18	NA	71393237	71385749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
Isoform_75796_2052	chr9	-	2162	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	14	24	-11	10	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGGCGATGTGTTCTT	2484	False	NA	-23	True	AATAAA	-25	NA	71393203	71385742	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
Isoform_758_9	chr10	-	2131	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	48	1	1	-1	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGGTTTCTTGTCTA	NA	False	NA	-2	True	AATAAA	-19	NA	33827207	33795138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
Isoform_75801_4	chr9	-	2727	10	ISM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	22	28847	-20	-22723	5prime_fragment	FALSE	canonical	1	2	junction_3	7.71882419242596	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAAAGAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	71678862	71562637	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
Isoform_75804_7	chr9	-	1999	18	ISM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-71	15907	-47	-8	5prime_fragment	FALSE	canonical	3	53	junction_4	13.4202759371175	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAGAAAAAGATGAAA	9307	False	NA	NA	False	NA	NA	NA	72019200	71765876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_75805_5	chr9	-	1879	17	ISM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-49	14327	1	-8	5prime_fragment	FALSE	canonical	3	33	junction_3	15.9334553691282	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAGAAAAAGATGAAA	9355	False	NA	NA	False	NA	NA	NA	72019152	71765876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
Isoform_75806_4	chr9	-	1285	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	128	1381	-12	2	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7864	False	NA	-30	True	AATAAA	-16	NA	72399255	72368382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_75809_22	chr9	-	823	9	ISM	ENSMUSG00000090626.10	ENSMUST00000184557.8	1434	13	143	16557	-2	1	5prime_fragment	FALSE	canonical	3	143	junction_8	33.6368473552442	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTTTGCCTCGCCTT	7879	False	NA	NA	False	AATAAA	-44	NA	72399240	72385017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
Isoform_75812_13	chr9	-	699	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	7	5	7	-5	multi-exon	FALSE	canonical	3	81	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTTTTTGTTTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	72892651	72887008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72887479_72892422
Isoform_75813_5	chr9	-	913	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	17	-219	17	219	multi-exon	FALSE	canonical	3	81	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATTAGTGACAGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	72892641	72886784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72887479_72892422
Isoform_75814_3	chr9	-	859	3	NNC	ENSMUSG00000086158.3	novel	711	2	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	3.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTTTTTGTTTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	72892644	72887008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_72887479_72891080_72891248_72892422
Isoform_75815_5	chr9	-	3159	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	72	-1038	24	6	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAAGTTGCTTCTGGTT	NA	False	NA	-5	True	AATAAA	-19	NA	72946909	72921939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_75816_4	chr9	-	2173	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	41	-21	-7	21	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGTTTTTAACAAA	NA	False	NA	NA	False	AATAAA	-37	NA	72946940	72922956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_75817_3	chr9	-	4102	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	77	-1986	29	1	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCGGGCTTCACACTAA	NA	False	NA	NA	False	AATAAA	-33	NA	72946904	72920991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
Isoform_75818_5	chr9	-	4328	6	FSM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	-240	1	-16	-1	multi-exon	FALSE	canonical	2	3	junction_5	119.229862031288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCACTGCTCAGTCTTT	NA	False	NA	-47	True	AATAAA	-17	NA	75316881	75294184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316483
Isoform_75819_9	chr9	-	4103	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	102.565881266628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGCTCAGTCTTTTA	NA	False	NA	-45	True	AATAAA	-19	NA	75317307	75294182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
Isoform_7582_62	chr11	-	3191	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_75820_6	chr9	-	4217	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-21	114	intron_retention	FALSE	canonical	3	45	junction_5	102.565881266628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTCCTGTTTGACTCT	NA	False	NA	-28	True	AATAAA	-14	NA	75317308	75294069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
Isoform_75821_53	chr9	-	4081	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-8	-1	-8	-1	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCACTGCTCAGTCTTT	NA	False	NA	-47	True	AATAAA	-17	NA	75317295	75294184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
Isoform_75823_36	chr9	-	4199	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-5	-122	-5	120	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTGACTCTTTAGAA	NA	False	NA	-22	True	AATAAA	-20	NA	75317292	75294063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
Isoform_75831_102	chr9	-	3248	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	4	415	4	-415	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTAGCAGACTGTTG	NA	False	NA	-6	True	AATAAA	-13	NA	75466935	75405403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_75832_43	chr9	-	3595	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-2	74	-2	-74	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATAGTCCCTTCATGTG	NA	False	NA	-3	True	NA	NA	NA	75466941	75405062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_75834_8	chr9	-	1750	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-25	1942	-25	222	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGGCTCAGAATCCAT	NA	False	NA	0	True	AATAAA	-15	NA	75466964	75406930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_75835_3	chr9	-	3676	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-16	7	-16	-7	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTAGCTGTATGC	NA	False	NA	64	True	AATAAA	-23	NA	75466955	75404995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_75836_5	chr9	-	2869	9	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	1	5486	1	1	5prime_fragment	FALSE	canonical	3	422	junction_1	38.5938385626514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	75466938	75410474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
Isoform_75838_3	chr9	-	1444	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	119	8308	-14	-113	multi-exon	TRUE	canonical	3	14	junction_9	3.42467444609388	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAATATGTGTAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	75518466	75481210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
Isoform_75840_10	chr9	-	3104	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	17	0	-3	0	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAGCTTTTTAAGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	77452135	77338104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_75842_4	chr9	-	2090	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-33	1064	-33	-798	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCGTTTTTGTCTTGTGT	NA	False	NA	1	True	AATACA	-18	NA	77452185	77339168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_75843_4	chr9	-	3160	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-37	-2	-37	2	multi-exon	TRUE	canonical	3	32	junction_5	6.66972316521396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGCTTTTTAAGAATTGT	NA	False	NA	NA	False	AATAAA	-19	NA	77452189	77338102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
Isoform_75844_37	chr9	-	2104	13	FSM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	49	2	-3	1	multi-exon	FALSE	non_canonical	2	34	junction_11	11.6437274482396	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGGATGGCCTTT	NA	False	NA	1	True	AATAAA	-29	NA	78015889	77988782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
Isoform_75845_8	chr9	-	1851	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	-1	0	1	multi-exon	FALSE	non_canonical	2	18	junction_12	15.7920514464996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGGATGGCCTTT	NA	False	NA	1	True	AATAAA	-29	NA	78016347	77988782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
Isoform_75848_5	chr9	-	940	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3874	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78249908	78238299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
Isoform_7585_51	chr11	-	3187	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_75850_10	chr9	-	835	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	35	0	35	0	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78254405	78238299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
Isoform_75859_39980	chr9	-	596	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	20	3	20	-3	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	39980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	78275439	78274336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78274577_78275002_78275186_78275266
Isoform_75861_527	chr9	-	631	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	-15	3	-15	-3	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	78275474	78274336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78274577_78275002_78275186_78275266
Isoform_75871_652	chr9	-	669	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	172	1297	172	-1297	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTCAGTTGATGGTTC	NA	False	NA	-18	True	AGTAAA	-15	NA	78285835	78284687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_75872_13	chr9	-	1997	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	172	-31	172	31	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAAGGGTGGTTTTGCC	NA	False	NA	NA	False	GATAAA	-20	NA	78285835	78283359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_75873_135	chr9	-	752	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	45	1341	45	-1341	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTGGTTTGATCAC	NA	False	NA	-11	True	TATAAA	-14	NA	78285962	78284731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_75874_158	chr9	-	732	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	111	1295	111	-1295	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCAGTTGATGGTTCGG	NA	False	NA	-16	True	AGTAAA	-17	NA	78285896	78284685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_75875_44	chr9	-	838	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	-4	1304	-4	-1304	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGAGTATTCAGTTG	NA	False	NA	-25	True	AGTAAA	-8	NA	78286011	78284694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78284974_78285256_78285440_78285635
Isoform_7588_77	chr11	-	3237	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_75880_5	chr9	-	2797	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	-15	1267	-15	-4	multi-exon	FALSE	canonical	1	6	junction_4	3.56195171219375	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAATGAAATTATAA	5258	False	NA	NA	False	NA	NA	NA	78350501	78339074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
Isoform_75899_14933	chr9	-	1735	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	53	6	53	-6	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	14933	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTTGGTCAATGCT	7153	False	NA	96	True	ATTAAA	-16	NA	78388953	78385736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
Isoform_759_4	chr10	-	2088	11	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	23.419863364247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827235	33795137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827198
Isoform_7590_37	chr11	-	3196	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_14	395.431726091875	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_7591_16	chr11	-	3205	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9047	-2	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_14	426.345511173695	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	377	False	NA	-12	True	AATAAA	-16	NA	106615267	106545045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
Isoform_75922_6	chr9	-	3237	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	-2	1	-2	-1	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATGGTGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	78495325	78443770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
Isoform_75925_1067	chr9	-	448	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	166	45	-2	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	1067	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666994	79662687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
Isoform_75926_9	chr9	-	4192	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	92	-626	92	626	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAATGAGAAGATGGT	NA	False	NA	NA	False	AATAAA	-12	NA	79700620	79675598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_75928_63	chr9	-	3566	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	87	5	87	-5	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATCGTGCTGTTTAT	NA	False	NA	-14	True	AATAAA	-9	NA	79700625	79676229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_75931_12	chr9	-	3611	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	42	5	42	-5	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATCGTGCTGTTTAT	NA	False	NA	-14	True	AATAAA	-9	NA	79700670	79676229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
Isoform_75933_19	chr9	-	2950	23	ISM	ENSMUSG00000032253.14	ENSMUST00000188868.7	3317	25	-97	6624	11	1	5prime_fragment	FALSE	canonical	3	34	junction_11	7.22484235865655	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAGCCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	82857558	82782707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
Isoform_75938_4	chr9	-	878	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	106	-1	26	1	multi-exon	FALSE	canonical	3	19	junction_1	12.1556571192182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCACCTGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	83028632	82991999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
Isoform_75940_6	chr9	-	857	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	6	-1	6	1	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCACCTGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	83028652	82991999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
Isoform_75943_17	chr9	-	3013	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	-19	7	6	-7	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGACTCTGTCCGTCGT	NA	False	NA	-6	True	AATAAA	-19	NA	83688324	83660751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
Isoform_75944_8	chr9	-	5419	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	41	190	21	7	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATGTGTGTTTCAG	NA	False	NA	-18	True	ATTAAA	-10	NA	85631346	85569602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_75945_8	chr9	-	5655	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	0	-5	0	5	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCGTGTGTTTGATTTC	NA	False	NA	-2	True	AATAAA	-21	NA	85631387	85569407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
Isoform_75949_13	chr9	-	1787	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	0	3	0	-3	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTTCTTTTGTTCTT	NA	False	NA	-3	True	ATTAAA	-23	NA	86347003	86189361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
Isoform_75950_384	chr9	-	2006	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	25	635	-9	-11	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453855	86437064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
Isoform_75952_7	chr9	-	2039	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	2	625	2	-1	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86453878	86437054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
Isoform_75955_5	chr9	-	2240	14	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	173.196847341382	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453854	86437064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86452640_86452876_86453782
Isoform_75958_98	chr9	-	2222	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	42	1024	42	291	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCTACAGTTCTTT	9652	False	NA	NA	False	AATAAA	-25	NA	86577964	86464447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
Isoform_75959_41	chr9	-	3240	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	42	6	42	-6	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATACCGTAAATGTCA	9652	False	NA	NA	False	ATTAAA	-14	NA	86577964	86463429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
Isoform_75962_3	chr9	-	1734	13	ISM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	250	36109	2	35	5prime_fragment	FALSE	canonical	3	45	junction_6	8.38649708360608	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGTAAGAGTATATT	NA	False	NA	NA	False	ACTAAA	-37	NA	87137339	87107738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
Isoform_75963_3	chr9	-	1736	13	ISM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	248	36109	0	35	5prime_fragment	FALSE	canonical	3	45	junction_6	8.38649708360608	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGTAAGAGTATATT	NA	False	NA	NA	False	ACTAAA	-37	NA	87137341	87107738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
Isoform_75964_62	chr9	-	3084	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	24	1	2	-1	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	-3	True	AATAAA	-39	NA	88320980	88258803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
Isoform_75966_7	chr9	-	2183	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	-35	1256	17	-7	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTGCTCTAAGTAGA	NA	False	NA	-8	True	AATAAA	-21	NA	88364284	88335997	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_75967_30	chr9	-	2187	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	326	6937	15	-8	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364286	88335998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_75968_3	chr9	-	2499	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	8	-9	intron_retention	FALSE	non_canonical	0	0	junction_11	267.790623775027	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCTGCTCTAAGTA	NA	False	NA	-10	True	AATAAA	-19	NA	88364600	88335999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364109
Isoform_7597_28	chr11	-	3139	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9016	1	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.471167808096	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	408	False	NA	-8	True	AATAAA	-20	NA	106615236	106545041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
Isoform_75970_3	chr9	-	3429	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	337	5684	26	-4	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGGAGGCGAGTGTA	NA	False	NA	-19	True	AATAAA	-14	NA	88364275	88334745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_75973_27	chr9	-	2585	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	356	3	-3	-3	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTTTACAATTCGT	NA	False	NA	NA	False	AATAAA	-31	NA	88364252	88337633	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_75974_3	chr9	-	2951	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	-13	6	6	-6	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACTGTGTTTACAATT	NA	False	NA	NA	False	AATAAA	-28	NA	88364621	88337636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_75975_3	chr9	-	2718	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	322	-96	15	96	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTGTGGAATATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	88364286	88337534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
Isoform_7598_37	chr11	-	3133	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.607244966974	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
Isoform_75986_139	chr9	-	1000	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	674	4	0	1	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
Isoform_75988_84	chr9	-	736	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	86	4	0	1	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
Isoform_75989_13	chr9	-	778	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	29	2	0	1	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
Isoform_7599_24	chr11	-	3183	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
Isoform_75992_133	chr9	-	933	4	NIC	ENSMUSG00000097195.11	novel	1678	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	461	junction_1	319.66545011934	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536
Isoform_75993_480	chr9	-	669	5	NIC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
Isoform_75995_11	chr9	-	1264	3	NIC	ENSMUSG00000097195.11	novel	1534	3	NA	NA	0	1	intron_retention	FALSE	canonical	3	461	junction_1	364.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATTCAATTCTTTT	NA	False	NA	-11	True	AATAAA	-36	NA	88404941	88403106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_88403502_88403970_88404435_88404536
Isoform_75999_36	chr9	-	794	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	17	-86	0	0	multi-exon	FALSE	canonical	3	43	junction_3	219.136182924378	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601623	88570658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
Isoform_76_20280	ERCC-00096	+	1088	1	FSM	ERCC-00096A	DQ459429	1091	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	20280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	2	1090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00096_+_0_1100
Isoform_760_344	chr10	-	1047	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	38	5	0	1	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAAGTGTTTACTTCC	NA	False	NA	-28	True	AATAAA	-18	NA	33895582	33872555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
Isoform_7600_25	chr11	-	3142	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	493.407245649242	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
Isoform_76000_64	chr9	-	730	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	88601630	88570659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_88571039_88597540_88597803_88601541
Isoform_76002_100	chr9	-	785	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	13	3	13	1	multi-exon	TRUE	canonical	3	319	junction_2	104	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601853	88570657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_88571039_88597540_88597803_88601711
Isoform_76004_46	chr9	-	1291	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	61	-6	61	6	multi-exon	FALSE	canonical	3	96	junction_1	7.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGATGTGTGCCTCTAT	NA	False	NA	-6	True	AATAAA	-20	NA	89587060	89581252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_89582033_89584824_89585074_89586798
Isoform_76005_15	chr9	-	1338	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	10	-2	10	2	multi-exon	FALSE	canonical	3	96	junction_1	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGATGTGTGCCT	NA	False	NA	-10	True	AATAAA	-16	NA	89587111	89581256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_89582033_89584824_89585074_89586798
Isoform_76015_27	chr9	-	1811	13	NNC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2463.2596670875	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996704	89973722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985823_89989287_89989356_89992178_89992226_89996588
Isoform_76018_111	chr9	-	1813	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	64	5	8	1	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996704	89973722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
Isoform_76023_1882	chr9	-	1696	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	123	5	8	1	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996704	89973722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
Isoform_76024_214	chr9	-	1730	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	89	5	13	1	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996738	89973722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
Isoform_76035_6	chr9	-	3272	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	6	2678	6	-2678	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTATGCTCTTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	90152816	90086757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_76036_3	chr9	-	5922	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	1	33	1	-33	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCAAAAGGTAGGT	NA	False	NA	-33	True	AATAAA	-16	NA	90152821	90084112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_76037_4	chr9	-	2210	4	ISM	ENSMUSG00000037410.14	ENSMUST00000144348.8	655	5	49	-1434	14	1434	intron_retention	FALSE	canonical	3	61	junction_1	8.60232526704263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90152808	90109671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_90111155_90123062_90123232_90131843_90131998_90152404
Isoform_76038_3	chr9	-	3912	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	36	2	36	-2	multi-exon	FALSE	canonical	3	138	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGCTACTCTGTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	94420098	94399918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_94402700_94406444_94406749_94419271
Isoform_76039_10	chr9	-	3542	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	3	4085	3	-5	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATAATGTTGTTTTTT	8296	False	NA	-6	True	AATAAA	-12	NA	95393944	95343035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_76041_14	chr9	-	3537	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-4	-422	-4	-5	multi-exon	TRUE	canonical	0	0	junction_13	167.860448931548	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATAATGTTGTTTTTT	8298	False	NA	-6	True	AATAAA	-12	NA	95393942	95343035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_76058_197	chr9	-	594	6	ISM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	31693	0	10	5prime_fragment	FALSE	canonical	3	752	junction_1	76.6237561073588	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCATTCTTACATAAT	8302	False	NA	NA	False	AATGAA	-40	NA	95393938	95375150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_76059_7	chr9	-	713	6	ISM	ENSMUSG00000032407.15	ENSMUST00000191213.7	3231	27	-9	31744	-8	10	5prime_fragment	FALSE	canonical	3	752	junction_1	76.6237561073588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCATTCTTACATAAT	8183	False	NA	NA	False	AATGAA	-40	NA	95394057	95375150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
Isoform_76060_25	chr9	-	462	5	ISM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	111	32120	0	10	5prime_fragment	FALSE	canonical	3	149	junction_3	304.142544705603	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCATTCTTACATAAT	8302	False	NA	NA	False	AATGAA	-40	NA	95393938	95375150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
Isoform_76061_26	chr9	-	3695	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	6	3	6	-3	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTTATTTCATT	NA	False	NA	-1	True	AATAAA	-16	NA	95727333	95634697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
Isoform_76063_291	chr9	-	1864	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	127	3	127	-3	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGGAACACATGATGG	NA	False	NA	-13	True	AATAAA	-38	NA	96246368	96214710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_76064_13	chr9	-	1898	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	7	89	7	-89	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGTTAAGTGCTT	NA	False	NA	-7	True	TATAAA	-16	NA	96246488	96214796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_76065_54	chr9	-	1592	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	8	394	8	-394	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGACTCTGCTTCTGCG	NA	False	NA	-11	True	AATAAA	-11	NA	96246487	96215101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
Isoform_76067_241	chr9	-	1139	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	84	9	-3	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3797	False	NA	-9	True	ATTAAA	-26	NA	96360644	96352998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_76068_47	chr9	-	1165	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	58	9	-7	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3771	False	NA	-9	True	ATTAAA	-26	NA	96360670	96352998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_76070_12	chr9	-	1267	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	-44	9	-44	-9	multi-exon	FALSE	canonical	3	1085	junction_1	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATATGCTCTTTA	3669	False	NA	-9	True	ATTAAA	-26	NA	96360772	96352998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96353906_96356010_96356059_96360460
Isoform_76073_6	chr9	-	3023	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	104	2686	23	319	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96513566	96424038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
Isoform_76074_3	chr9	-	3105	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	21	2687	21	318	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	96513649	96424039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
Isoform_76076_6	chr9	-	3073	3	FSM	ENSMUSG00000040433.17	ENSMUST00000126066.8	2937	3	1	-137	1	137	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAGA	9515	False	NA	NA	False	NA	NA	NA	96601902	96568173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96571083_96600262_96600363_96601838
Isoform_76078_3	chr9	-	3165	3	FSM	ENSMUSG00000040433.17	ENSMUST00000126066.8	2937	3	-94	-134	-94	134	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	9420	False	NA	NA	False	NA	NA	NA	96601997	96568176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96571083_96600262_96600363_96601838
Isoform_76081_31	chr9	-	2911	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	0	-3	0	3	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACAGCTTACGGTGTGT	NA	False	NA	1	True	AATAAA	-19	NA	96771482	96705393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
Isoform_76085_35	chr9	-	2682	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	38	0	38	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	96900858	96825534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96826758_96877627_96878475_96900246
Isoform_76086_8	chr9	-	2744	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	-24	0	-24	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	96900920	96825534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96826758_96877627_96878475_96900246
Isoform_76088_42	chr9	-	4687	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-10	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATCTTAAGATT	NA	False	NA	-14	True	ATTAAA	-27	NA	96993181	96957627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76090_6	chr9	-	5296	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGCTCTTGTTTCCA	NA	False	NA	-3	True	NA	NA	NA	96993179	96957016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76091_3	chr9	-	4699	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	430.738156395507	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993203	96957628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76092_10	chr9	-	4630	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993186	96957623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76093_6	chr9	-	4643	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	27	-10	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATCTTAAGATT	NA	False	NA	-14	True	ATTAAA	-27	NA	96993183	96957627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76094_77	chr9	-	4584	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	29	614	29	-10	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATCTTAAGATT	NA	False	NA	-14	True	ATTAAA	-27	NA	96993181	96957627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76097_8	chr9	-	1961	4	FSM	ENSMUSG00000032449.14	ENSMUST00000148337.2	685	4	-141	-1135	29	1135	multi-exon	FALSE	canonical	3	669	junction_1	32.124756808418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAAAGAAATGTT	NA	False	NA	NA	False	NA	NA	NA	96993181	96973730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96975231_96979155_96979234_96982127_96982293_96992963
Isoform_76100_3	chr9	-	1156	2	FSM	ENSMUSG00000032449.14	ENSMUST00000152632.2	1060	2	-95	-1	29	1	multi-exon	FALSE	canonical	3	717	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	96993181	96981354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_96982293_96992963
Isoform_76102_164	chr9	-	1194	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	1	2	1	-2	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTGTAATTCGTTT	NA	False	NA	-11	True	ATTAAA	-18	NA	98483712	98470784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
Isoform_76104_4	chr9	-	3618	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	515	junction_4	22.0661883130428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCTGTAATTCGTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98483726	98470785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
Isoform_76106_13	chr9	-	1562	9	ISM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-128	36999	-128	27697	5prime_fragment	FALSE	canonical	3	182	junction_5	19.0509186130223	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAAAACGAAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	99022268	98955705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
Isoform_76108_5	chr9	-	4530	23	FSM	ENSMUSG00000037681.14	ENSMUST00000042158.13	4483	23	-47	0	-8	0	multi-exon	TRUE	canonical	3	14	junction_20	5.80538365130531	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATATTTCTATT	NA	False	NA	1	True	AATAAA	-20	NA	99240618	99192015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
Isoform_76110_3	chr9	-	3938	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-240	-4	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCCTGCCTTATTTCCT	2310	False	NA	-8	True	NA	NA	NA	99302445	99267476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
Isoform_76111_3	chr9	-	3809	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-110	-3	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	2440	False	NA	-7	True	NA	NA	NA	99302315	99267475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
Isoform_76112_12	chr9	-	1323	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-179	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGCGAAGCCCCAAGT	2371	False	NA	-29	True	ATTAAA	-16	NA	99302384	99270030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
Isoform_76113_8	chr9	-	1388	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-244	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGCGAAGCCCCAAGT	2306	False	NA	-29	True	ATTAAA	-16	NA	99302449	99270030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
Isoform_76115_48	chr9	-	4014	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	685	2	230	-2	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGCCTTATTTCCTCT	3924	False	NA	-6	True	NA	NA	NA	99318749	99267474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
Isoform_76127_3	chr9	-	1157	5	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	323	3	combination_of_known_splicesites	FALSE	canonical	1	15	junction_4	214.024531304241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCGAAGCCCCAAGTCT	4017	False	NA	-27	True	ATTAAA	-18	NA	99318656	99270028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99318362
Isoform_76135_4	chr9	-	4630	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-2	19	-2	-19	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACTTCTTTAAAGGAG	NA	False	NA	-13	True	AATAAA	-16	NA	99450954	99360443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_76138_11	chr9	-	3045	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-232	7	18	-7	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAGTTTTTATGTG	NA	False	NA	-8	True	AATAAA	-21	NA	99450934	99400863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_76139_14	chr9	-	2822	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-9	7	5	-7	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAGTTTTTATGTG	NA	False	NA	-8	True	AATAAA	-21	NA	99450711	99400863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_7614_22	chr11	-	1528	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	-23	1	-1	-1	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTTTTGGACTTTTGT	4296	False	NA	NA	False	AATAAA	-32	NA	106670364	106659079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
Isoform_76140_21	chr9	-	1654	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-9	1175	5	-1175	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	-2	True	AATAAA	-17	NA	99450711	99402031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_76141_16	chr9	-	1875	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-228	1173	22	-1173	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTAGTGAGTGGT	NA	False	NA	0	True	AATAAA	-19	NA	99450930	99402029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
Isoform_76142_3	chr9	-	2754	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	6	1716	6	994	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTTATAACACCTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	100428181	100376061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
Isoform_76143_20	chr9	-	1766	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	4	2706	4	4	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATATTGCATCTGTCACA	NA	False	NA	-36	True	AATAAA	-22	NA	100428183	100377051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
Isoform_76146_44	chr9	-	2293	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	22	5	1	-5	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTTGGGTGTTGTTTT	NA	False	NA	-5	True	NA	NA	NA	100916929	100864089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
Isoform_76149_4	chr9	-	1892	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	-25	453	-25	-453	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAATCTCAATCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	100916976	100864537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
Isoform_7615_9	chr11	-	1403	8	NIC	ENSMUSG00000020718.13	novel	1770	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTTTTGGACTTTTGT	4296	False	NA	NA	False	AATAAA	-32	NA	106670364	106659079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
Isoform_76151_4	chr9	-	2185	14	FSM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	1	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_9	26.8991102116318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGGTGTTGTTTTTTT	NA	False	NA	-2	True	NA	NA	NA	100916929	100864086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
Isoform_76152_3	chr9	-	2713	13	NIC	ENSMUSG00000043154.16	novel	6786	14	NA	NA	-44	1114	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	10.758717395675	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGGAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	101129038	100983967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101128860
Isoform_76153_47	chr9	-	2098	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-15	2097	-15	2	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGAATGTTTATTACC	NA	False	NA	-8	True	AATAAA	-19	NA	102503748	102463883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_76154_9	chr9	-	2194	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-12	1998	-12	-8	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTAGAGTAACTACAGA	NA	False	NA	91	True	AATAAA	-19	NA	102503745	102463784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
Isoform_76158_16	chr9	-	984	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	8	2072	0	297	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGAGTTCTTGAAAC	NA	False	NA	NA	False	GATAAA	-22	NA	103079328	103067302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
Isoform_76159_35	chr9	-	2316	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	174	81	0	-81	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCCAAACTCCATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	103107469	103086074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
Isoform_76161_43	chr9	-	3205	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	172	10	-49	0	multi-exon	FALSE	canonical	3	85	junction_1	174.534201519358	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242867	103230302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_76163_25	chr9	-	3918	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-49	-2846	-49	0	multi-exon	FALSE	canonical	3	61	junction_1	184.859913177519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242867	103230302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103233226_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_76164_8	chr9	-	3934	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189875.8	554	5	-560	-2820	-68	0	multi-exon	TRUE	canonical	3	42	junction_2	179.509052696514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242886	103230302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103233229_103233478_103233633_103237074_103237218_103241173_103241251_103242252
Isoform_76165_198	chr9	-	3894	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-103	-4	-22	0	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242840	103230302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_76166_16	chr9	-	4039	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-246	-6	56	2	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAATGTGATGCTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	103242983	103230300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_76168_27	chr9	-	1099	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-130	2818	-49	-2	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGCATCAGATGGAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	103242867	103233124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
Isoform_76173_7	chr9	-	597	2	ISM	ENSMUSG00000032803.16	ENSMUST00000190226.7	3107	5	-9	10877	-8	-2377	5prime_fragment	FALSE	canonical	3	39	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTAGGATGTGATTA	NA	False	NA	NA	False	NA	NA	NA	103242187	103241179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_103241251_103241661
Isoform_76175_187	chr9	-	686	2	ISM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-49	8031	-49	-2377	5prime_fragment	FALSE	canonical	3	478	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTAGGATGTGATTA	NA	False	NA	NA	False	NA	NA	NA	103242867	103241179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_103241251_103242252
Isoform_76177_18	chr9	-	800	2	ISM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	-163	8031	58	-2377	5prime_fragment	FALSE	canonical	3	478	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTAGGATGTGATTA	NA	False	NA	NA	False	NA	NA	NA	103242981	103241179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_103241251_103242252
Isoform_76181_48	chr9	-	1790	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	20	594	20	457	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATGGAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-33	NA	103940313	103924391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
Isoform_76182_103	chr9	-	1454	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	35	915	35	136	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATGTGTATCTTCAC	NA	False	NA	-35	True	AATAAA	-17	NA	103940298	103924712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
Isoform_76183_3	chr9	-	1484	12	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	13	149	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	131.795609352619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCACGGAGTTGTTATGC	NA	False	NA	-22	True	AATAAA	-30	NA	103940320	103924699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937421_103937507_103937592_103937639_103939990
Isoform_76186_3	chr9	-	2200	13	ISM	ENSMUSG00000032560.15	ENSMUST00000186788.7	6747	56	72434	-716	-6375	-319	3prime_fragment	FALSE	canonical	3	208	junction_7	22.3364425696364	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGTATGTTCTGTAA	NA	False	NA	-3	True	AATAAA	-23	NA	104051592	104028799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547
Isoform_76187_18	chr9	-	2478	21	ISM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	5	58076	5	-13335	5prime_fragment	FALSE	canonical	3	149	junction_2	15.4450639364167	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAAGACAAAGAATAAA	NA	False	NA	NA	False	TATAAA	-23	NA	104140124	104086556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
Isoform_76189_15	chr9	-	1255	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	24	352	19	-11	multi-exon	FALSE	canonical	3	25	junction_1	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAACAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105008999	105006882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105007710_105008491_105008762_105008841
Isoform_76190_5	chr9	-	3461	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-4	2185	-4	300	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGGTTTAGAAATT	NA	False	NA	-3	True	AATAAA	-19	NA	105372297	105289821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
Isoform_76191_3	chr9	-	3704	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-17	1955	-6	530	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGGTTGTTTTTTGGT	NA	False	NA	-16	True	AGTAAA	-22	NA	105372310	105289591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
Isoform_76193_28	chr9	-	3828	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	16	1032	-12	533	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTTGTTTTTTGGTTTT	NA	False	NA	-13	True	AGTAAA	-25	NA	105372316	105289588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_76194_17	chr9	-	3661	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-52	1267	-52	298	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTATTTGGTTTAGAAA	NA	False	NA	-5	True	AATAAA	-17	NA	105372384	105289823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_76195_28	chr9	-	3581	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	30	1265	2	300	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGGTTTAGAAATT	NA	False	NA	-3	True	AATAAA	-19	NA	105372302	105289821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_76196_8	chr9	-	4842	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	30	4	2	1	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372302	105288560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_76200_3	chr9	-	4919	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-50	7	-50	-2	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAATGACTTCCCAGTT	NA	False	NA	-4	True	AATAAA	-18	NA	105372382	105288563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
Isoform_76202_4	chr9	-	1421	3	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-18	57811	-18	-62	5prime_fragment	FALSE	canonical	3	385	junction_2	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAAACTAATTA	NA	False	NA	NA	False	NA	NA	NA	105372350	105346367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_105347347_105371613_105371797_105372091
Isoform_76205_16	chr9	-	4031	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1997	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	3.53553390593274	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCACATGTGTCTTACT	3458	False	NA	-6	True	AATAAA	-18	NA	106037334	106030058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295
Isoform_76208_156	chr9	-	1838	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	5	3	5	-3	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3848	False	NA	-7	True	NA	NA	NA	106076469	106072152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
Isoform_76209_3	chr9	-	2251	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	5	-410	5	406	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTTCTCTGTATTTCT	3848	False	NA	NA	False	NA	NA	NA	106076469	106071739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
Isoform_76210_3	chr9	-	2203	9	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	45	0	intron_retention	FALSE	canonical	3	111	junction_3	11.9556472012183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3888	False	NA	-4	True	NA	NA	NA	106076429	106072149	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106075196_106075299_106075424_106076168
Isoform_76211_3	chr9	-	2539	8	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	44	-3	intron_retention	FALSE	canonical	3	111	junction_3	12.0203908388358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3887	False	NA	-7	True	NA	NA	NA	106076430	106072152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106075196_106075299_106075424_106076168
Isoform_76212_15	chr9	-	2195	11	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-38	14	combination_of_known_junctions	TRUE	canonical	1	1	junction_9	54.0582093673107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTAGGTGTTTCTGC	8524	False	NA	0	True	AATAAA	-45	NA	106125107	106111111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120592_106123957_106124178_106124983
Isoform_76213_151	chr9	-	2181	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	746	472	-38	-3	multi-exon	FALSE	canonical	3	139	junction_7	18.0612845611822	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTCCTGGTTAGT	8524	False	NA	-17	True	AATAAA	-28	NA	106125107	106111128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
Isoform_76216_11	chr9	-	1435	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315437	106310188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
Isoform_76217_10	chr9	-	1423	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	97	9	-20	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315421	106310188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
Isoform_76218_4	chr9	-	1261	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	104.893067242576	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324872	106317249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
Isoform_76220_54	chr9	-	1231	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.56165113888	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	-1	True	AATAAA	-26	NA	106324849	106317251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
Isoform_76222_52	chr9	-	1234	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGACGTTGTGTTTCC	NA	False	NA	-3	True	AATAAA	-24	NA	106324849	106317253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
Isoform_76224_5	chr9	-	1299	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGAGTGACGTTGTGTT	NA	False	NA	-6	True	AATAAA	-21	NA	106324863	106317256	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106317604_106317819_106318110_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
Isoform_76225_3	chr9	-	741	2	ISM	ENSMUSG00000023192.13	ENSMUST00000201955.2	448	3	1132	-448	1132	349	3prime_fragment	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGTTTTGTTAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	106522680	106521734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_106522291_106522495
Isoform_76226_3	chr9	-	4902	5	ISM	ENSMUSG00000023192.13	ENSMUST00000023959.13	4711	6	-9	1419	-7	349	intron_retention	FALSE	canonical	0	0	junction_4	2.27760839478607	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGTTTTGTTAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	106533288	106521734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_106522291_106522495_106522677_106524349_106525426_106527594_106528433_106531037
Isoform_76228_31	chr9	-	2006	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-110	0	-6	0	multi-exon	FALSE	canonical	3	46	junction_5	161.744242555956	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7862	False	NA	0	True	AATAAA	-28	NA	106563132	106535944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
Isoform_76229_32	chr9	-	1583	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-219	0	2	0	multi-exon	TRUE	canonical	3	151	junction_5	120.179865202121	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7894	False	NA	0	True	AATAAA	-28	NA	106563100	106535944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
Isoform_7623_24	chr11	-	2363	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	4	1192	4	1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9620	False	NA	-8	True	AATAAA	-18	NA	106679354	106672372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_76233_125	chr9	-	1383	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	10	-2	-2	2	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGAGTTGGTTTTTG	7890	False	NA	-4	True	AATAAA	-24	NA	106563104	106535948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
Isoform_76234_28	chr9	-	1466	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-73	-2	-61	2	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGAGTTGGTTTTTG	7807	False	NA	-4	True	AATAAA	-24	NA	106563187	106535948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
Isoform_76235_4	chr9	-	1562	6	NIC	ENSMUSG00000040813.17	novel	1364	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	187.437883043957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGAGTTGGTTTTT	7892	False	NA	-5	True	AATAAA	-23	NA	106563102	106535949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562145_106562195_106562833
Isoform_76236_7	chr9	-	1364	6	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	172.206387802543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGAGTTGGTTTTT	7890	False	NA	-5	True	AATAAA	-23	NA	106563104	106535949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562145_106562195_106563033
Isoform_76237_5	chr9	-	4828	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	2	4475	2	-3767	multi-exon	TRUE	canonical	3	17	junction_10	7.57277616039918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAGAAAAGACCCCA	7297	False	NA	NA	False	NA	NA	NA	106666391	106569755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
Isoform_76238_6	chr9	-	606	5	NIC	ENSMUSG00000032575.17	novel	502	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	394.142344210819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGGAAAATGATCAATT	NA	False	NA	NA	False	AATAAA	-40	NA	106769114	106746396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106746561_106747401_106747472_106767359_106767502_106768269_106768398_106769012
Isoform_76239_321	chr9	-	859	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	41	1347	-21	-9	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGAGCTGGCACAGT	NA	False	NA	-20	True	ATTAAA	-15	NA	106769137	106765960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
Isoform_7624_877	chr11	-	2329	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1192	0	1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106672372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_76240_3	chr9	-	1236	11	NIC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	15	-348	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3.3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAGAAAAGGATTT	NA	False	NA	NA	False	NA	NA	NA	107109093	106900964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
Isoform_76242_140	chr9	-	2676	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.0594746552762	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTCCTGGGTTTCTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	107166978	107132128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_76243_44	chr9	-	2796	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-18	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.0594746552762	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGGTTTCTTTATGTC	NA	False	NA	-1	True	AATAAA	-25	NA	107167094	107132124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_76244_39	chr9	-	2674	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.4651084449602	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGGGTTTCTTTATG	NA	False	NA	-3	True	AATAAA	-23	NA	107166978	107132126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_76245_12	chr9	-	2804	11	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_10	45.4053961550827	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107167076	107132133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_76249_5	chr9	-	2847	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	-34	3	-34	-3	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTCCTGGGTTTCTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	107167110	107132128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
Isoform_7625_55	chr11	-	3521	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_76250_15	chr9	-	2657	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	12	2	at_least_one_novel_splicesite	TRUE	canonical	3	62	junction_11	44.9833761764433	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGATTCCTGGGTTTCT	NA	False	NA	-8	True	AATAAA	-18	NA	107166966	107132131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_76251_5	chr9	-	2765	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.4651084449602	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107167076	107132133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
Isoform_76252_6	chr9	-	2187	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	5	0	-5	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATGGACTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	107215549	107204287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
Isoform_76253_46	chr9	-	1577	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	6	609	6	-1	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTGTTATTAACATTC	NA	False	NA	-13	True	AATAAA	-11	NA	107215543	107204891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
Isoform_76254_3	chr9	-	1316	10	NNC	ENSMUSG00000032579.15	novel	1888	10	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	57.3643327047972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGGTGAGCCAGTATT	NA	False	NA	-28	True	AGTAAA	-15	NA	107215544	107204906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213994_107215479
Isoform_76255_52	chr9	-	1136	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	47	-21	-19	21	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGAGGATGGTTCTTGC	NA	False	NA	1	True	AATAAA	-40	NA	107419345	107416752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
Isoform_76256_5	chr9	-	1189	4	FSM	ENSMUSG00000037190.13	ENSMUST00000194967.2	658	4	-49	-482	17	15	multi-exon	FALSE	canonical	3	15	junction_2	45.536310297998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAGAGTTGAGGATGGT	NA	False	NA	-5	True	AATAAA	-34	NA	107419375	107416758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
Isoform_76257_16	chr9	-	2755	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	237	-1	104	0	3prime_fragment	FALSE	canonical	3	40	junction_12	7.52054477747457	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	8395	False	NA	-23	True	AATAAA	-15	NA	107482364	107475552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
Isoform_76258_5	chr9	-	2915	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	215	-139	82	1	3prime_fragment	TRUE	canonical	3	40	junction_12	7.52054477747457	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	8373	False	NA	-1	True	ATTAAA	-16	NA	107482386	107475414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
Isoform_76259_4	chr9	-	3017	19	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2519	1	1	0	3prime_fragment	FALSE	canonical	0	0	junction_18	15.5384826944089	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	6880	False	NA	-23	True	AATAAA	-15	NA	107483879	107475552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748
Isoform_76264_52	chr9	-	2177	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	22	16	-2	-16	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAACACCAAAAACTTC	4792	False	NA	-16	True	AATAAA	-8	NA	107512544	107491339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
Isoform_76265_5	chr9	-	2577	4	FSM	ENSMUSG00000032562.14	ENSMUST00000193835.2	698	4	-11	-1868	-2	-1211	multi-exon	FALSE	canonical	3	1229	junction_3	93.2892753154878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTATTTTATG	4792	False	NA	NA	False	NA	NA	NA	107512544	107494910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107497057_107497245_107497388_107497618_107497662_107512298
Isoform_76266_5	chr9	-	2445	16	FSM	ENSMUSG00000010064.16	ENSMUST00000193932.6	2463	16	24	-6	24	0	multi-exon	FALSE	canonical	0	0	junction_10	1.9731531449265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTGTGTTCTATATTCT	9803	False	NA	NA	False	TATAAA	-15	NA	107544601	107528353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107529238_107529327_107529432_107532221_107532367_107532454_107532580_107532783_107532885_107533133_107533214_107533298_107533470_107533654_107533714_107533793_107533877_107534828_107534911_107535008_107535102_107535192_107535267_107535835_107535952_107536130_107536210_107536293_107536444_107544502
Isoform_76267_4	chr9	-	3081	25	FSM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	-12	-5	-3	0	multi-exon	FALSE	canonical	3	44	junction_9	145.554250815823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9702	False	NA	-1	True	AAGAAA	-17	NA	107648198	107617693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
Isoform_76268_5	chr9	-	3389	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	145.293470976274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9729	False	NA	-2	True	AAGAAA	-16	NA	107648171	107617694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
Isoform_76269_4	chr9	-	3380	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_24	145.703537477075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGTTTCCTGTGTCT	9722	False	NA	-9	True	AAGAAA	-9	NA	107648178	107617701	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647759
Isoform_76270_66	chr9	-	3084	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-3	124	-3	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9702	False	NA	-1	True	AAGAAA	-17	NA	107648198	107617693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
Isoform_76275_17	chr9	-	3624	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	91	1	3	-1	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7604	False	NA	NA	False	AATAAA	-17	NA	107749929	107650762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
Isoform_76276_5	chr9	-	3726	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	-11	1	-3	-1	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7502	False	NA	NA	False	AATAAA	-17	NA	107750031	107650762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
Isoform_76277_3	chr9	-	3996	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	113.526006690147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAATAAATTTTGT	7601	False	NA	NA	False	AATAAA	-8	NA	107749932	107650771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
Isoform_76278_7	chr9	-	3903	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	91	5	-3	-1	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7596	False	NA	NA	False	AATAAA	-17	NA	107749937	107650762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
Isoform_76280_29	chr9	-	2155	17	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTTGTTAAAGTTTT	7560	False	NA	NA	False	AATAAA	-17	NA	107749973	107650762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
Isoform_76281_6	chr9	-	2222	17	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7494	False	NA	NA	False	AATAAA	-18	NA	107750039	107650761	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
Isoform_76291_12	chr9	-	1063	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	-40	2	-40	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGGTCCCATACTCC	9716	False	NA	NA	False	AATAAA	-15	NA	107863118	107861423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107862264_107862895
Isoform_76292_3	chr9	-	4700	39	FSM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	23	4	-12	1	multi-exon	FALSE	canonical	3	15	junction_38	17.254651305945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956477	107928874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
Isoform_76293_6	chr9	-	4277	39	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_17	14.9572798866187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107956522	107928873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_76294_3	chr9	-	4686	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_38	16.5285784572411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956481	107928874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
Isoform_76295_21	chr9	-	4231	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	79	-1	5	1	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGGGCCCGCTCT	NA	False	NA	-6	True	ATTAAA	-12	NA	107956495	107928874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
Isoform_76296_10	chr9	-	2481	21	ISM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	111	1	-16	0	intron_retention	FALSE	canonical	3	143	junction_17	21.0653744329409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971694	107962612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425
Isoform_76298_299	chr9	-	2384	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	133	1	3	0	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971672	107962612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_76299_5	chr9	-	2479	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	125	-86	-2	86	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACAGTGTATTCATCC	NA	False	NA	54	True	NA	NA	NA	107971680	107962525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_7630_22	chr11	-	2503	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9241	False	NA	-8	True	AATAAA	-18	NA	106679733	106672372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
Isoform_76300_13	chr9	-	2444	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	71	3	-56	-2	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGTCTGTGCTGGTA	NA	False	NA	-35	True	AATAAA	-11	NA	107971734	107962614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_76301_13	chr9	-	2263	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	42.4109360896456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGTCTGTGCTGGTA	NA	False	NA	-35	True	AATAAA	-11	NA	107971680	107962614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
Isoform_76303_4	chr9	-	2483	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	126	junction_20	21.4370590333656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGTCTGTGCTGGTA	NA	False	NA	-35	True	AATAAA	-11	NA	107971691	107962614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107962877_107962959_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
Isoform_76304_7	chr9	-	1728	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5518	2537	5518	-2537	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCAGTTGAGAAACT	3821	False	NA	NA	False	AATAAA	-30	NA	107982094	107975758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_76305_5	chr9	-	1238	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5494	3051	5494	-3051	3prime_fragment	FALSE	canonical	3	14	junction_1	4.12310562561766	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGTTGTTGTTTTA	3797	False	NA	NA	False	NA	NA	NA	107982118	107976272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
Isoform_76307_10	chr9	-	4394	4	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	175.562587763516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108141117	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140978
Isoform_76308_32	chr9	-	4478	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-59	-4	20	1	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108140994	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
Isoform_7631_31	chr11	-	2468	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9276	False	NA	-8	True	AATAAA	-18	NA	106679698	106672372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
Isoform_76310_9	chr9	-	5554	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-48	-1091	31	-233	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108140983	108082065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
Isoform_76313_80	chr9	-	4287	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	67	10	3	1	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108140947	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_76314_14	chr9	-	4457	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-103	10	0	1	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108141117	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_76315_20	chr9	-	5412	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	29	-1077	29	-233	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108140985	108082065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_76317_8	chr9	-	5572	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-131	-1077	12	-233	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141145	108082065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
Isoform_76319_58	chr9	-	4338	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	4	1320	4	1	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108141153	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
Isoform_7632_165	chr11	-	2446	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8980	False	NA	-9	True	AATAAA	-45	NA	106679994	106672373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
Isoform_76320_93	chr9	-	4302	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	40	1320	0	1	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	13	True	ACTAAA	-31	NA	108141117	108083152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
Isoform_76321_20	chr9	-	5389	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	40	233	0	-233	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108141117	108082065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
Isoform_76322_16	chr9	-	5425	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	3	234	3	-234	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141154	108082066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
Isoform_76330_3	chr9	-	2709	2	ISM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	-170	-578	0	578	intron_retention	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	7115	False	NA	NA	False	NA	NA	NA	108183359	108179578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_108181453_108182524
Isoform_76331_9	chr9	-	1603	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	186	-695	16	-1	multi-exon	TRUE	canonical	3	19	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGGTGTGGTTATTCA	7301	False	NA	-3	True	ATTAAA	-12	NA	108183173	108180157	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108181453_108182524_108182580_108182920
Isoform_76332_6	chr9	-	2332	6	FSM	ENSMUSG00000032609.13	ENSMUST00000035232.13	1897	6	-409	-26	15	4	multi-exon	TRUE	canonical	3	5	junction_5	2.71293199325011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGGTTTCTTTGAAGC	9967	False	NA	-2	True	AATAAA	-18	NA	108329985	108324830	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108328074_108328591_108329515
Isoform_76333_3	chr9	-	3415	5	NIC	ENSMUSG00000032609.13	novel	2718	11	NA	NA	16	-2	intron_retention	FALSE	canonical	3	5	junction_4	3.03108891324554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGTGGGGTTTCTT	9968	False	NA	-8	True	AATAAA	-12	NA	108329984	108324836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108328591_108329515
Isoform_76334_220	chr9	-	670	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	491	326	-13	-2	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTGCTCAGTTTG	8634	False	NA	-4	True	NA	NA	NA	108444142	108443061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_76335_18	chr9	-	934	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	498	55	-6	-55	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATCAGTTGTCACTT	8641	False	NA	NA	False	NA	NA	NA	108444135	108442790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_76336_4	chr9	-	1016	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	491	-20	-13	20	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCCGTTTCTCGTACC	8634	False	NA	NA	False	NA	NA	NA	108444142	108442715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_76337_3	chr9	-	3577	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	501	-2591	-3	2591	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAATAATAAA	8644	False	NA	NA	False	NA	NA	NA	108444132	108440144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
Isoform_76338_3	chr9	-	843	4	NIC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	-42	-6	intron_retention	FALSE	canonical	3	450	junction_1	39.9082280572148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTTTTGTTGCTCAG	8605	False	NA	-8	True	NA	NA	NA	108444171	108443065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108443275_108443357_108443459_108443539_108443951_108444049
Isoform_76339_8	chr9	-	592	4	NIC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	232.267566014332	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTTGCTCAGTTT	8644	False	NA	-5	True	NA	NA	NA	108444132	108443062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108443275_108443357_108443459_108443754_108443951_108444049
Isoform_76341_83	chr9	-	4140	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	23	0	23	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5774	False	NA	-1	True	AATAAA	-20	NA	108455915	108449509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
Isoform_76342_145	chr9	-	4026	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	137	0	137	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5888	False	NA	-1	True	AATAAA	-20	NA	108455801	108449509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
Isoform_76343_3	chr9	-	1842	10	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-3	-13	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	18.6474769087329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGCGAGCTAAGCGCCCG	NA	False	NA	-11	True	AATAAA	-23	NA	108474782	108456073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_76345_21	chr9	-	1740	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	83	18	-4	-18	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGCCGGCGAGCTAAGC	NA	False	NA	-16	True	AATAAA	-18	NA	108474783	108456078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_76346_7	chr9	-	2449	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	-22	intron_retention	FALSE	canonical	3	11	junction_4	18.9369843164111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGGGGCCGGCGAGCT	NA	False	NA	-20	True	AATAAA	-14	NA	108474786	108456082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_76347_3	chr9	-	2354	8	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-8	-20	intron_retention	FALSE	canonical	3	31	junction_7	10.0772526220277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCGGCGAGCTAA	NA	False	NA	-18	True	AATAAA	-16	NA	108474787	108456080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_76348_3	chr9	-	2296	3	ISM	ENSMUSG00000006675.11	ENSMUST00000195181.2	2035	4	-30	-4	-26	4	intron_retention	FALSE	canonical	3	44	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	108474805	108458745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_108460143_108460840_108461032_108474097
Isoform_76349_4	chr9	-	2044	4	FSM	ENSMUSG00000006675.11	ENSMUST00000195181.2	2035	4	-5	-4	-1	4	multi-exon	FALSE	canonical	3	31	junction_3	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	108474780	108458745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108460143_108460840_108461032_108474097_108474180_108474406
Isoform_76351_28	chr9	-	2224	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	4	16	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	243.725439467754	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526564	108481868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
Isoform_76353_97	chr9	-	2247	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526584	108481868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
Isoform_76354_27	chr9	-	3972	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	108526585	108480144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
Isoform_76356_96	chr9	-	3903	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	4	2	combination_of_known_junctions	TRUE	canonical	3	359	junction_14	154.606683771002	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526564	108480143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
Isoform_76357_250	chr9	-	2174	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	16	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526560	108481868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
Isoform_7636_20	chr11	-	3594	12	FSM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	0	-1	0	1	multi-exon	FALSE	canonical	3	3830	junction_7	165.368159266449	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGAAATTGTACTTT	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106672372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
Isoform_76362_167	chr9	-	3926	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	-6	4	0	1	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	108526585	108480144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
Isoform_76363_490	chr9	-	2166	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	30	1728	-8	16	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTGACTTAGAATGTA	NA	False	NA	-8	True	AATAAA	-27	NA	108526549	108481868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
Isoform_76372_19	chr9	-	4096	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	21	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.9887555902104	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	False	NA	-4	True	AATAAA	-13	NA	108903167	108887005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_76373_4	chr9	-	1101	2	FSM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	-22	5	-22	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	False	NA	-4	True	AATAAA	-13	NA	108888824	108887005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108887997_108888714
Isoform_76374_19	chr9	-	2548	13	NIC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	38.7092976198513	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903173	108888816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890267_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_76375_202	chr9	-	2552	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	19	1	15	-1	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCCTGAGTCCG	NA	False	NA	0	True	ATTAAA	-25	NA	108903173	108888815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_76376_6	chr9	-	2461	13	FSM	ENSMUSG00000025646.10	ENSMUST00000160217.8	4248	13	-28	1815	21	-1	multi-exon	FALSE	canonical	3	16	junction_5	38.4544282957835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCCTGAGTCCG	NA	False	NA	0	True	ATTAAA	-25	NA	108903167	108888815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894280_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_76377_20	chr9	-	2723	8	ISM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	9	4499	5	3219	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGTATAAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	108903183	108893313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
Isoform_76380_958	chr9	-	488	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	247	0	52	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTCTAGTGTTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	108911446	108907201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
Isoform_76381_310	chr9	-	634	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	101	0	-101	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	108911446	108907055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
Isoform_76392_392	chr9	-	3764	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	42	0	-6	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930113	109913387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
Isoform_76395_9	chr9	-	4052	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946483	109913390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
Isoform_76396_32	chr9	-	3951	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	17	0	6	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946473	109913387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
Isoform_76397_23	chr9	-	3977	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	-11	2	0	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946501	109913389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
Isoform_76400_11	chr9	-	3945	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	160.130247864018	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946476	109913390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
Isoform_76403_46	chr9	-	4013	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	425	3	6	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946473	109913390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
Isoform_76404_7	chr9	-	4254	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	184	3	-14	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946714	109913390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
Isoform_76405_16	chr9	-	4035	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	156.078578694428	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946501	109913390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
Isoform_76409_4	chr9	-	1464	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-41	1	4	-1	multi-exon	FALSE	canonical	3	279	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109946483	109943244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109944651_109946425
Isoform_76411_7	chr9	-	4449	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	78	3	-26	-1	multi-exon	FALSE	canonical	1	6	junction_9	1.68508343201146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCAGTTTCCTGA	2036	False	NA	-5	True	AATAAA	-14	NA	110305684	110254996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
Isoform_76412_3	chr9	-	4464	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	73	1	-26	-1	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCAGTTTCCTGA	2036	False	NA	-5	True	AATAAA	-14	NA	110305684	110254996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
Isoform_76413_6	chr9	-	1020	5	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	51.265851207212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTACTTGGCTCCTTGG	8977	False	NA	-8	True	ATTAAA	-22	NA	110453467	110450205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_110450806_110450907_110451051_110451139_110451183_110452154_110452304_110453382
Isoform_76414_109	chr9	-	1169	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	53	1	-21	-1	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACTTGGCTCCTTGGAC	8977	False	NA	-6	True	ATTAAA	-24	NA	110453467	110450203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
Isoform_76415_102	chr9	-	1194	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	28	1	7	-1	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACTTGGCTCCTTGGAC	8952	False	NA	-6	True	ATTAAA	-24	NA	110453492	110450203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
Isoform_76416_13	chr9	-	1282	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	22	3	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_4	51.6786948364604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTCCTTGGACCTGT	8967	False	NA	-2	True	ATTAAA	-28	NA	110453477	110450199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452403_110453382
Isoform_76417_12	chr9	-	1996	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	-21	1	intron_retention	FALSE	canonical	3	126	junction_2	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGCTCCTTGGACCT	8977	False	NA	-4	True	ATTAAA	-26	NA	110453467	110450201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
Isoform_76418_3	chr9	-	1352	4	ISM	ENSMUSG00000049555.11	ENSMUST00000050958.9	2802	6	6146	335	2054	-335	3prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110703035	110695113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_110696026_110696515_110696666_110699698_110699817_110702863
Isoform_7642_3	chr11	-	2883	3	ISM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	95998	1	4289	-1	3prime_fragment	FALSE	canonical	3	52	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATACTGAGTTTTTAC	9724	False	NA	-7	True	AATAAA	-38	NA	106715543	106710892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_106713591_106713845_106713922_106715434
Isoform_76420_1433	chr9	-	1862	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	6	0	-6	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTGAGTAGTGCCT	NA	False	NA	-21	True	AGTAAA	-15	NA	110775162	110768676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
Isoform_76421_33	chr9	-	1913	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	13	6	13	-6	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTGAGTAGTGCCT	NA	False	NA	-21	True	AGTAAA	-15	NA	110775213	110768676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
Isoform_76429_10	chr9	-	2551	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	21	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	111.636756635522	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100647	111057308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
Isoform_7643_20	chr11	-	1949	11	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-6	combination_of_known_junctions	FALSE	canonical	3	138	junction_10	946.562882221778	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACTTGCTGTTTTCTT	9744	False	NA	NA	False	AATAAA	-21	NA	106890289	106879460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888141_106890184
Isoform_76431_86	chr9	-	2497	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	258	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100601	111057321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
Isoform_76432_47	chr9	-	2548	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	205	1	14	-1	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTTTTTTTTTTTAT	NA	False	NA	-28	True	AATAAA	-14	NA	111100654	111057323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
Isoform_76433_131	chr9	-	3207	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	16	2728	1	0	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537311	113483539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_76437_12	chr9	-	4435	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	6	1510	6	1218	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAAAAAAATGGC	NA	False	NA	NA	False	AATAGA	-4	NA	113537321	113482321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_76439_31	chr9	-	3240	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537335	113483539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_76440_4	chr9	-	4459	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-12	1215	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAGAAAAAGAAAAAAAT	NA	False	NA	NA	False	AATAGA	-1	NA	113537339	113482324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
Isoform_76441_9	chr9	-	2136	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	9	1319	9	11	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATGTGGTTTTTATT	NA	False	NA	-1	True	AGTAAA	-22	NA	113855820	113807093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
Isoform_76443_587	chr9	-	1669	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	-2	7	-2	-7	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGGTCTCTCCGTC	NA	False	NA	NA	False	GATAAA	-13	NA	114219745	114204208	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
Isoform_76445_103	chr9	-	1716	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	-44	2	-44	-2	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTCTCCGTCCTTCC	NA	False	NA	NA	False	GATAAA	-18	NA	114219787	114204203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
Isoform_76449_3	chr9	-	3469	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	1722	4141	1722	-4141	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAG	NA	False	NA	10	True	NA	NA	NA	114391715	114340341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
Isoform_76450_3	chr9	-	3397	4	NNC	ENSMUSG00000079259.3	novel	9332	4	NA	NA	34360	-4143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.8884444373331	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAGAAAAAAAAAAA	9156	False	NA	8	True	NA	NA	NA	114359077	114340343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_114343165_114344800_114344936_114354021_114354190_114358804
Isoform_76451_80	chr9	-	2737	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-109	225	1	-137	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469251	114415170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_76454_31	chr9	-	2734	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-137	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_5	132.25432982036	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469251	114415170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_76457_165	chr9	-	2705	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-133	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469251	114415166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_76459_67	chr9	-	2702	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-133	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	96.2047231971076	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469251	114415166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_7646_4	chr11	-	2050	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	2432	junction_9	276.995431615401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACTTGCTGTTTTCTT	9744	False	NA	NA	False	AATAAA	-21	NA	106890289	106879460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
Isoform_76461_8	chr9	-	3786	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	9	-138	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469239	114415171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_76464_11	chr9	-	1711	10	FSM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	1	11	1	-11	multi-exon	FALSE	canonical	3	407	junction_3	40.9103204703612	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	114469251	114446606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
Isoform_76466_1227	chr9	-	986	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	0	7	0	-4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114610917	114585910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_76467_626	chr9	-	1130	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-144	7	-137	-4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114611061	114585910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_76468_24	chr9	-	1163	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-177	7	-170	-4	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114611094	114585910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
Isoform_76473_21	chr9	-	1226	5	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	572.561950796593	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGTCTCTAACACTAG	NA	False	NA	1	True	AATAAA	-31	NA	114610917	114585888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_114586360_114587872_114587955_114590974_114591292_114592286_114592461_114610735
Isoform_7648_3	chr11	-	360	4	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	51125	43605	-13592	-16138	internal_fragment	FALSE	canonical	3	14	junction_1	7.36357401145817	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATAAAGATGAGTCAG	1509	False	NA	NA	False	AATACA	-3	NA	106971623	106967511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_106967528_106968485_106968625_106969345_106969476_106971548
Isoform_76480_4	chr9	-	1067	4	FSM	ENSMUSG00000041012.5	ENSMUST00000047013.4	1064	4	-4	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACGTGTGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	114673224	114618413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114618814_114619705_114619823_114625108_114625283_114672848
Isoform_76481_8	chr9	-	3959	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	-2	434	-2	-434	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114763057	114728842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_76482_46	chr9	-	3835	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	121	435	13	-435	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGAGCCTATTTTTC	NA	False	NA	-8	True	AATAAA	-19	NA	114762934	114728843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_76483_15	chr9	-	4253	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	137	1	29	-1	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGATTGTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	114762918	114728409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
Isoform_76488_411	chr9	-	4266	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-47	2	-47	-2	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGATTTCTGATACCT	NA	False	NA	-36	True	AATAAA	-19	NA	115139536	115071650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
Isoform_76491_173	chr9	-	4379	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-47	-111	-47	111	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGTCTCTTGCAGACC	NA	False	NA	-1	True	AATAAA	-20	NA	115139536	115071537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
Isoform_76505_17	chr9	-	511	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	87	571	73	2	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGTTCTGATTTATTA	NA	False	NA	-5	True	AATAAA	-15	NA	117979158	117894160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_76506_42	chr9	-	490	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	112	567	98	6	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTGATTTATTAAATA	NA	False	NA	-1	True	AATAAA	-19	NA	117979133	117894156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_76507_7	chr9	-	625	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	-28	572	-28	1	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGTTCTGATTTATT	NA	False	NA	-6	True	AATAAA	-14	NA	117979273	117894161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_76508_4	chr9	-	1046	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	112	11	98	-11	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAACCAGGAAGG	NA	False	NA	NA	False	ATTAAA	-6	NA	117979133	117893600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
Isoform_76509_50	chr9	-	2701	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	1	4	1	-4	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTTCTAGTCTCTTT	8080	False	NA	NA	False	TATAAA	-21	NA	118917328	118900598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
Isoform_7651_14	chr11	-	2988	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	111	-1	82	1	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1212	False	NA	NA	False	TATAAA	-13	NA	107080096	107057487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_76510_11	chr9	-	2645	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	5	7	5	-7	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATCCTTCTAGTCTC	2843	False	NA	NA	False	TATAAA	-18	NA	118922565	118900601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
Isoform_76511_3	chr9	-	1642	12	FSM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	27	20	27	-20	multi-exon	TRUE	canonical	2	3	junction_6	59.9400526973023	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGCAGTCATTTCA	NA	False	NA	NA	False	AGTAAA	-15	NA	118986134	118977110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118984812_118984871_118985658_118985753_118985891
Isoform_76514_95	chr9	-	4643	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-2	6	-2	-6	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5570	False	NA	41	True	AATAAA	-23	NA	119151495	119067503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
Isoform_76524_7	chr9	-	2907	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	-956	9	414	3	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGTACTTGTGACTGA	NA	False	NA	-8	True	AATAAA	-17	NA	119170063	119165008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
Isoform_76525_40	chr9	-	1915	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	36	9	-3	3	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGTACTTGTGACTGA	NA	False	NA	-8	True	AATAAA	-17	NA	119169071	119165008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
Isoform_76526_285	chr9	-	2558	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	13	1335	-2	-1335	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTGTAACTAAAG	NA	False	NA	-4	True	AATAAA	-15	NA	119766618	119755657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
Isoform_76527_4	chr9	-	3472	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	12	422	-3	-422	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACTCACTGTGAGATC	NA	False	NA	NA	False	TATAAA	-38	NA	119766619	119754744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
Isoform_76528_3	chr9	-	2757	8	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	13	-1332	intron_retention	FALSE	canonical	3	103	junction_4	11.7229932793878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTTGTAACTAAAGCTT	NA	False	NA	-1	True	AATAAA	-18	NA	119766603	119755654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
Isoform_76530_52	chr9	-	2990	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	8.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119812807	119800229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119812684
Isoform_76533_24	chr9	-	3089	5	FSM	ENSMUSG00000032515.9	ENSMUST00000035101.9	2906	5	-184	1	31	-1	multi-exon	FALSE	canonical	1	1	junction_4	11.4972822875669	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813693	119800229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471
Isoform_76534_23	chr9	-	2972	6	NNC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	12.9676520619579	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGGTCTTCTTGGTG	NA	False	NA	-1	True	AATAAA	-14	NA	119813742	119800231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471_119813536_119813699
Isoform_76535_363	chr9	-	2910	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813742	119800229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
Isoform_76536_108	chr9	-	2975	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813807	119800229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
Isoform_76539_10	chr9	-	2977	5	NNC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9268604418766	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCTTCTTGGTGAG	NA	False	NA	1	True	AATAAA	-16	NA	119813744	119800229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813634
Isoform_76540_6	chr9	-	4109	37	FSM	ENSMUSG00000040936.16	ENSMUST00000171923.8	4103	37	-7	1	-7	-1	multi-exon	TRUE	canonical	2	8	junction_10	8.07583653886513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCATGTGTCAAACCCTC	NA	False	NA	-2	True	AATAAA	-15	NA	121106270	120793520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_76541_3	chr9	-	2941	25	ISM	ENSMUSG00000040936.16	ENSMUST00000051479.13	3898	34	8	83146	6	34	5prime_fragment	FALSE	canonical	3	16	junction_16	5.64564114064017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTCTCCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	121106230	120985882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_76542_8	chr9	-	2952	25	NIC	ENSMUSG00000040936.16	novel	3898	34	NA	NA	0	34	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	5.47579902845238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTCTCCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	121106238	120985882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
Isoform_76543_4	chr9	-	2757	8	FSM	ENSMUSG00000061536.14	ENSMUST00000078547.12	5713	8	-68	3024	2	-35	multi-exon	FALSE	canonical	1	1	junction_7	8.73183245139207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTAAGT	NA	False	NA	NA	False	AAGAAA	-28	NA	121534093	121512134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121529618_121529744_121533989
Isoform_76544_20	chr9	-	2632	7	FSM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	2	35	2	-35	multi-exon	FALSE	canonical	3	5	junction_5	6.55108133567785	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTAAGT	NA	False	NA	NA	False	AAGAAA	-28	NA	121534093	121512134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
Isoform_76545_4	chr9	-	2470	6	FSM	ENSMUSG00000061536.14	ENSMUST00000139193.2	938	6	-50	-1482	0	-35	multi-exon	FALSE	canonical	2	3	junction_4	7.62627038597505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTAAGT	NA	False	NA	NA	False	AAGAAA	-28	NA	121534095	121512134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
Isoform_76546_5	chr9	-	2596	15	ISM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	5501	0	-2881	0	3prime_fragment	FALSE	canonical	1	2	junction_4	1.88034951158403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGCTCTCGTGGAGTGT	NA	False	NA	NA	False	NA	NA	NA	121663026	121626692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_121627306_121628091_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
Isoform_76547_4	chr9	-	2667	16	FSM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	-27	0	-27	0	multi-exon	FALSE	canonical	1	2	junction_4	1.82086670449969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGCTCTCGTGGAGTGT	6553	False	NA	NA	False	NA	NA	NA	121668554	121626692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121627306_121628091_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792_121663020_121668476
Isoform_76548_3	chr9	-	2446	14	ISM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	5484	953	-2898	1	internal_fragment	FALSE	canonical	1	2	junction_3	1.94601702164208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCCATATATAT	NA	False	NA	NA	False	NA	NA	NA	121663043	121627645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
Isoform_76549_32	chr9	-	516	4	NIC	ENSMUSG00000038412.9	novel	605	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	216	junction_3	942.112637757409	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686691	121678603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_121678756_121679253_121679389_121681556_121681672_121686577
Isoform_76551_5	chr9	-	863	4	NIC	ENSMUSG00000038412.9	novel	605	5	NA	NA	-359	0	combination_of_known_splicesites	FALSE	canonical	3	216	junction_3	942.112637757409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121687038	121678603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_121678756_121679253_121679389_121681556_121681672_121686577
Isoform_76553_274	chr9	-	459	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	798	975	-2	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686630	121678603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_76554_113	chr9	-	521	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	736	975	-13	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686692	121678603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_76555_31	chr9	-	863	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	394	975	-355	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121687034	121678603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_76557_5	chr9	-	1496	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	737	-1	-12	1	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGATGTCTTGTTTTTA	NA	False	NA	-2	True	ATTAAA	-14	NA	121686691	121677627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
Isoform_7656_33	chr11	-	3111	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	48	-1	19	1	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1149	False	NA	NA	False	TATAAA	-13	NA	107080159	107057487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_76560_11	chr9	-	2396	3	FSM	ENSMUSG00000066235.8	ENSMUST00000217610.2	2413	3	12	5	4	0	multi-exon	FALSE	canonical	2	4	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAAGTCTTTTTCTGAT	NA	False	NA	-5	True	ATTAAA	-16	NA	121825067	121810676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121812890_121813165_121813223_121824941
Isoform_76561_4	chr9	-	2454	3	NIC	ENSMUSG00000066235.8	novel	2504	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825074	121810674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_121812890_121823910_121824017_121824941
Isoform_76562_37	chr9	-	2361	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	4	0	4	0	multi-exon	FALSE	canonical	3	12	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825087	121810674	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_121812890_121824941
Isoform_76563_43	chr9	-	2616	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	32	5	-5	-5	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTGGCAAATGTTTCA	NA	False	NA	-2	True	ATTAAA	-32	NA	122123457	122004944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
Isoform_76564_3	chr9	-	4180	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-5	890	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	42.9434382518318	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAATAGGATA	NA	False	NA	NA	False	NA	NA	NA	122695055	122680088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
Isoform_76565_11	chr9	-	4114	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	25	890	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAATAGGATA	NA	False	NA	NA	False	NA	NA	NA	122695025	122680088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
Isoform_76568_7	chr9	-	896	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	17	2448	-7	-2	multi-exon	FALSE	canonical	3	36	junction_2	10	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTCTTAGTCACTGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	122780048	122776601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122777174_122777989_122778135_122779869
Isoform_76571_38	chr9	-	2489	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	3	0	1	0	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8741	False	NA	-1	True	AATAAA	-16	NA	122942242	122905896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
Isoform_76574_26	chr9	-	2458	7	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	97.6774738048077	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8724	False	NA	-1	True	AATAAA	-16	NA	122942259	122905896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
Isoform_76577_411	chr9	-	2454	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	11	4522	10	0	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8724	False	NA	-1	True	AATAAA	-16	NA	122942259	122905896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
Isoform_76582_9	chr9	-	2327	6	FSM	ENSMUSG00000025786.18	ENSMUST00000155778.8	1633	6	-28	-666	10	-2	multi-exon	FALSE	canonical	3	7	junction_4	109.405667129267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGCTCTGCTCTCTC	8724	False	NA	-3	True	AATAAA	-14	NA	122942259	122905898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
Isoform_76583_3	chr9	-	3479	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	12	579	12	-579	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTATAAAACTTTGGT	NA	False	NA	NA	False	ATTAAA	-20	NA	123546678	123526655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_76584_15	chr9	-	1348	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	76	2646	0	395	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAAATCTTAATTTATCTA	NA	False	NA	-3	True	AATAAA	-15	NA	123546614	123528722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_76585_3	chr9	-	1425	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	1	2644	1	397	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTTAATTTATCTAAT	NA	False	NA	-1	True	AATAAA	-17	NA	123546689	123528720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
Isoform_76587_5	chr9	-	4626	18	FSM	ENSMUSG00000025241.17	ENSMUST00000167595.9	7692	18	0	3066	0	-3066	multi-exon	FALSE	canonical	3	23	junction_5	6.23584903191129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTTAAATATTAAAAAA	9310	False	NA	NA	False	ATTAAA	-25	NA	123680964	123621640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
Isoform_76588_7	chr9	-	2888	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	113.743375875501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2184	False	NA	-13	True	NA	NA	NA	58157036	58125824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_76589_8	chr9	-	2724	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.710299502448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2211	False	NA	-12	True	NA	NA	NA	58157009	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_7659_98	chr11	-	3048	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	111	-1	82	1	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGAAAATGTCTCTCT	1212	False	NA	NA	False	TATAAA	-13	NA	107080096	107057487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_76592_56	chr9	-	3056	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_76595_51	chr9	-	2919	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2175	False	NA	-12	True	NA	NA	NA	58157045	58125823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_76596_11	chr9	-	3389	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2168	False	NA	-3	True	AGTAAA	-21	NA	58157052	58125360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
Isoform_76597_16	chr9	-	709	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGAGTGATGGCGTCAC	NA	False	NA	0	True	AATAAA	-16	NA	124198153	124195693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_124196190_124197940
Isoform_76598_10	chr9	-	899	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124198150	124195500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_124196190_124197940
Isoform_76600_3	chr9	-	1978	7	NNC	ENSMUSG00000003410.9	novel	5014	7	NA	NA	-1	-1570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.80277563773199	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	279	False	NA	NA	False	NA	NA	NA	21963320	21929326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21930130_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948154_21962885
Isoform_76602_11	chr9	-	1979	7	NNC	ENSMUSG00000003410.9	novel	5014	7	NA	NA	-2	-1573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.73205080756888	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAACAAAAAACA	278	False	NA	NA	False	NA	NA	NA	21963321	21929329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21930130_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948157_21962885
Isoform_76604_5	chr9	-	1506	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34901116	34889332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34901035
Isoform_76605_3	chr9	-	1607	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_5	6.40624695121879	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34899970	34889332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34899788
Isoform_76606_11	chr9	-	837	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	6	-7969	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTAGTCTTTTTTCA	NA	False	NA	-6	True	AATAAA	-19	NA	96513583	96461909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
Isoform_76607_10	chr9	-	1883	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.93955929903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGCCTCTGTTCTCTT	6277	False	NA	-5	True	NA	NA	NA	21763910	21748643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_21748864_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
Isoform_76609_3	chr9	-	882	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGATGATATATGATAT	NA	False	NA	NA	False	NA	NA	NA	32047581	32046601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_32046898_32046995
Isoform_76610_3	chr9	-	289	2	Intergenic	novelGene_2012	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGCCTGTGTCTTAGT	NA	False	NA	NA	False	AATAAA	-8	NA	30940783	30940274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_30940444_30940663
Isoform_76611_4	chr9	-	837	2	Intergenic	novelGene_2044	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAGTATCAGTATTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	59182455	59181494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_59182170_59182293
Isoform_76614_11	chr9	+	2651	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	45	4978	12	1	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTATACTTT	3	True	NA	NA	False	AATATA	-34	NA	3335522	3386176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_76616_4	chr9	+	2559	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTATACTTT	-7	True	NA	NA	False	AATATA	-34	NA	3335478	3386176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_76617_6	chr9	+	2837	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	13	753	-2	1	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTATACTTT	5	True	NA	NA	False	AATATA	-34	NA	3335490	3386176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_76618_3	chr9	+	3711	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	10	-118	-5	118	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATTTTGTTGTCTATT	2	True	NA	NA	False	TTTAAA	-35	NA	3335487	3387047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
Isoform_76623_3	chr9	+	4039	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	474	-67	-22	67	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATATCCTGCTCAC	-13	True	NA	16	True	ATTAAA	-16	NA	3404065	3479303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
Isoform_76624_9	chr9	+	3842	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	496	108	0	-108	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGAATCTGTAGC	9	True	NA	13	True	TATAAA	-14	NA	3404087	3479128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
Isoform_76625_3	chr9	+	793	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-119	1639	-117	-1639	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGCATTTGTTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	4309715	4330072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
Isoform_76626_4	chr9	+	692	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-124	1663	-124	-1642	multi-exon	TRUE	canonical	3	30	junction_1	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTGTTTGCATTTGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	4309708	4330069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_4309935_4316826_4317072_4329848
Isoform_76629_87	chr9	+	2805	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	15	-20	8	20	multi-exon	FALSE	canonical	3	88	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCAGAGTTATATGTTA	10	True	NA	34	True	AATAAA	-21	NA	4376576	4386890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_4376624_4383536_4384143_4384738
Isoform_7663_8	chr11	-	3579	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	111	-532	82	532	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAAAGCCAAGCGGT	1212	False	NA	NA	False	NA	NA	NA	107080096	107056956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
Isoform_76630_19	chr9	+	2669	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-25	156	-25	-147	multi-exon	FALSE	canonical	3	88	junction_1	13	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATTCTGTATTCTTTG	-30	True	NA	7	True	AATACA	-21	NA	4376536	4386714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_4376624_4383536_4384143_4384738
Isoform_76632_3	chr9	+	2964	4	NNC	ENSMUSG00000041124.12	novel	2800	3	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	51.4090350900393	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTTCCTGTCTGA	33	True	NA	7	True	ATTAAA	-15	NA	4376599	4386863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_4376624_4381549_4381759_4383536_4384143_4384738
Isoform_76635_6	chr9	+	1377	9	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	424.067193231214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	8	True	NA	24	True	AATAAA	-32	NA	7184548	7207040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072_7206223_7206719
Isoform_76636_519	chr9	+	1213	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	29	1179	-2	-14	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCTTAAAGTGAAGATG	8	True	NA	10	True	AATAAA	-18	NA	7184548	7207026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
Isoform_76640_8	chr9	+	1109	7	FSM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	-2	15	-2	-15	multi-exon	FALSE	canonical	3	18	junction_6	367.438165621857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCCTTAAAGTGAAGAT	8	True	NA	9	True	AATAAA	-17	NA	7184548	7207025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7206719
Isoform_76642_81	chr9	+	2854	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	51	2	51	-2	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTAGTGTTTTGTTG	-25	True	NA	14	True	AATAAA	-17	NA	7764092	7794332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
Isoform_76644_3	chr9	+	2962	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	-60	5	-60	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGTTTAGTGTTTTG	NA	False	NA	11	True	AATAAA	-14	NA	7763981	7794329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
Isoform_76645_6	chr9	+	1148	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	2	1219	2	1011	multi-exon	FALSE	canonical	3	27	junction_1	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTAAGGAATTCATTTC	NA	False	NA	1	True	AATAAA	-13	NA	13246611	13253205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13246677_13251695_13252424_13252850
Isoform_76646_18	chr9	+	3200	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660467	13717775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_76647_43	chr9	+	3089	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	-2	1	-2	0	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660474	13717776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_76650_37	chr9	+	3123	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-18	1	-2	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660474	13717776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_76651_116	chr9	+	3010	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	777	1	2	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660482	13717776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
Isoform_76657_10	chr9	+	3636	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	55	11	36	-11	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739066	13757826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
Isoform_76658_9	chr9	+	2446	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	1	1255	1	-1255	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATCCGTGCTTATGTCT	NA	False	NA	1	True	ATTAAA	-13	NA	13739012	13756582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
Isoform_76659_4	chr9	+	3661	10	NNC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	37.2677996249965	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGATTCTGCTGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	13739029	13757817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748135_13748269_13750935_13751038_13755324
Isoform_76661_86	chr9	+	2137	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	28	6960	28	324	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAAGCAGTTGTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	14187624	14237437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
Isoform_76664_18	chr9	+	806	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	33	-8	33	8	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411975	14421669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76665_9	chr9	+	995	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	34	-198	34	1	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTGCTACAATTTATA	NA	False	NA	-11	True	AATAAA	-32	NA	14411976	14421859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76669_65	chr9	+	1034	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	63	14	33	1	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTGCTACAATTTATA	NA	False	NA	-11	True	AATAAA	-32	NA	14411975	14421859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76670_228	chr9	+	844	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	63	204	33	8	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411975	14421669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76672_38	chr9	+	1086	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	63	-38	33	38	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAACTACTTTTGTG	NA	False	NA	41	True	TATAAA	-22	NA	14411975	14421911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76673_73	chr9	+	890	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	17	204	-13	8	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411929	14421669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76675_15	chr9	+	1132	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	17	-38	-13	38	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAACTACTTTTGTG	NA	False	NA	41	True	TATAAA	-22	NA	14411929	14421911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76676_24	chr9	+	1080	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	17	14	-13	1	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTGCTACAATTTATA	NA	False	NA	-11	True	AATAAA	-32	NA	14411929	14421859	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
Isoform_76680_82	chr9	+	2563	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	38	685	-10	-685	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14695987	14745257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76681_14	chr9	+	3228	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	53	5	5	-5	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGATAAATAATCTCAT	NA	False	NA	4	True	AATAAA	-22	NA	14696002	14745937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76682_9	chr9	+	3277	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	4	5	4	-5	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGATAAATAATCTCAT	NA	False	NA	4	True	AATAAA	-22	NA	14695953	14745937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76685_61	chr9	+	2558	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	45	-685	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14696042	14745257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76686_3	chr9	+	3239	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	44	-5	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGATAAATAATCTCAT	NA	False	NA	4	True	AATAAA	-22	NA	14696041	14745937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76687_20	chr9	+	2632	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-3	-685	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCCGTTGTTCATT	NA	False	NA	14	True	NA	NA	NA	14695968	14745257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76688_3	chr9	+	3989	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	46	747	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	14696043	14746689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76689_3	chr9	+	3931	19	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	775	-747	421	747	3prime_fragment	FALSE	canonical	3	276	junction_5	28.9164932218088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	14696724	14746689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
Isoform_76691_13	chr9	+	2000	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	-6	-3	-6	3	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTTTGTTTTTCAGT	NA	False	NA	NA	False	ATTAAA	-4	NA	15150334	15170715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
Isoform_76693_9	chr9	+	1434	7	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	69	junction_1	217.881275010038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
Isoform_76699_33	chr9	+	1315	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-3	-307	1	1	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9119	False	NA	6	True	AATAAA	-17	NA	15217556	15223401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
Isoform_76701_4	chr9	+	1193	7	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	198.555407884046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9118	False	NA	5	True	AATAAA	-16	NA	15217555	15223400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
Isoform_76702_9	chr9	+	1100	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	49	-1	-1	1	multi-exon	FALSE	canonical	3	55	junction_6	190.157317912184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9121	False	NA	6	True	AATAAA	-17	NA	15217558	15223401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
Isoform_76703_29	chr9	+	1214	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	3	-1	-1	1	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACCTTTTATAGTTT	9121	False	NA	0	True	NA	NA	NA	15217558	15228267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
Isoform_76711_9	chr9	+	883	3	FSM	ENSMUSG00000058173.13	ENSMUST00000215907.2	994	3	110	1	110	-1	multi-exon	FALSE	canonical	2	6	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGGGTGTTTCTCTTG	NA	False	NA	7	True	AATAAA	-15	NA	15404837	15456552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_15404926_15436923_15437001_15455834
Isoform_76716_55	chr9	+	2217	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	131	3441	-44	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8496	False	NA	12	True	NA	NA	NA	18203551	18225297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_76717_4	chr9	+	2290	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	58	3441	58	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8423	False	NA	12	True	NA	NA	NA	18203478	18225297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_76719_4	chr9	+	3044	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	112	2633	-63	-2633	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGAAAAAGAA	8477	False	NA	NA	False	NA	NA	NA	18203532	18226105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_76720_5	chr9	+	2984	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	172	2633	-3	-2633	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGAAAAAGAA	8537	False	NA	NA	False	NA	NA	NA	18203592	18226105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_76721_3	chr9	+	2378	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-31	3442	-31	1987	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8334	False	NA	11	True	NA	NA	NA	18203389	18225296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
Isoform_76723_15	chr9	+	4000	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-3	-9	-3	9	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTTTCCCTGTTT	NA	False	NA	23	True	AATAAA	-26	NA	19533420	19561036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_76724_3	chr9	+	4008	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTGATATTTGTTTC	NA	False	NA	16	True	AATAAA	-19	NA	19533381	19561029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_76725_10	chr9	+	3974	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533380	19561025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
Isoform_76727_11	chr9	+	2560	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	194	10220	-6	-5	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGCAGCTGAGTTTCAT	36	False	NA	20	True	ATTAAA	-20	NA	20492814	20506485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
Isoform_76728_4	chr9	+	2651	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	110	10213	-90	2	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGTTTCATGATATAG	NA	False	NA	27	True	ATTAAA	-27	NA	20492730	20506492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
Isoform_76729_7	chr9	+	472	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161486.8	794	5	-31	353	-18	10	multi-exon	FALSE	canonical	3	14	junction_3	472.738828530088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTGTGTGAGAGTTG	NA	False	NA	28	True	AATAAA	-25	NA	20556098	20558083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556897_20556956_20557911
Isoform_7673_3	chr11	-	2829	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-52	-3544	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCGCTTCCCCTTTTT	NA	False	NA	-4	True	AATAAA	-18	NA	107361577	107102261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
Isoform_76731_439	chr9	+	417	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1510	187	-6	0	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556123	20558073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
Isoform_76732_7	chr9	+	554	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161882.8	489	5	-57	-8	-10	0	multi-exon	FALSE	canonical	2	15	junction_4	473.611127403063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556106	20558073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556990_20557825
Isoform_76733_6	chr9	+	589	4	FSM	ENSMUSG00000084786.10	ENSMUST00000154429.9	2511	4	1931	-9	-12	7	multi-exon	FALSE	canonical	3	1046	junction_3	4.78423336480244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATACTTGTGTGAGAG	NA	False	NA	25	True	AATAAA	-22	NA	20556104	20558080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556190_20556488_20556786_20556917_20556956_20557911
Isoform_76734_5	chr9	+	499	5	FSM	ENSMUSG00000084786.10	ENSMUST00000162303.8	505	5	7	-1	-6	0	multi-exon	FALSE	canonical	3	29	junction_1	467.366558495577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGCTGTCATACTTG	NA	False	NA	17	True	AATAAA	-14	NA	20556123	20558072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556273_20556488_20556556_20556701_20556786_20556917_20556956_20557911
Isoform_76735_5	chr9	+	484	4	FSM	ENSMUSG00000084786.10	ENSMUST00000160124.2	501	4	19	-2	19	0	multi-exon	FALSE	canonical	3	1046	junction_3	68.2658203072535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556355	20558073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20556556_20556701_20556786_20556917_20556956_20557911
Isoform_76737_2212	chr9	+	919	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	30	2894	30	-2894	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	2212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563420	20574986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
Isoform_76739_70	chr9	+	977	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	-28	2894	-28	-2894	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563362	20574986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
Isoform_7674_5	chr11	-	2801	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-21	-3541	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTTCCCCTTTTTGTG	NA	False	NA	-1	True	AATAAA	-21	NA	107361546	107102258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
Isoform_76744_15	chr9	+	1660	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	24	-1	8	1	multi-exon	FALSE	canonical	3	59	junction_6	22.3469853694417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAGCCTTAATTCCC	NA	False	NA	20	True	AATAAA	-29	NA	20779961	20785604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
Isoform_76745_13	chr9	+	1588	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	-16	111	-16	-111	multi-exon	TRUE	canonical	3	59	junction_6	22.3469853694417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAAGCTTTTGCAAGCA	NA	False	NA	-92	True	AATAAA	-22	NA	20779921	20785492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
Isoform_76748_4	chr9	+	1786	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	8	-11	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTCTTCAGAGTAATA	NA	False	NA	8	True	AATAAA	-17	NA	20779961	20785592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_76749_4	chr9	+	3338	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	-2	-12	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTCTTCAGAGTAAT	NA	False	NA	7	True	AATAAA	-16	NA	20779951	20785591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_76750_5	chr9	+	3225	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	4	-119	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20779957	20785484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
Isoform_76751_38	chr9	+	1573	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	96	1	4	-1	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799566	20803473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
Isoform_76760_957	chr9	+	1116	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	164	8	-13	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914197	20920127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
Isoform_76761_29	chr9	+	1278	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	-1	11	-1	-3	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914032	20920124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
Isoform_76763_19	chr9	+	1191	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914201	20920124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
Isoform_76769_869	chr9	+	2533	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	2	0	-2	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20927280	20940111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
Isoform_76770_10	chr9	+	3417	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-890	8	-890	-8	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTGTCTTGTGAGTTT	NA	False	NA	8	True	AATAAA	-13	NA	20926390	20940105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
Isoform_76771_9	chr9	+	3007	6	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	1	-5	intron_retention	FALSE	canonical	3	355	junction_3	37.2150507187616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCTTGTGAGTTTGTG	NA	False	NA	11	True	AATAAA	-16	NA	20927281	20940108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20938632_20938727_20938977_20939066
Isoform_76773_170	chr9	+	2697	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-4	-25	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAACAAAAAGAAAAAA	1160	False	NA	NA	False	AAAAAG	-41	NA	21092907	21122898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_76774_8	chr9	+	2477	10	FSM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	20	27	20	-27	multi-exon	FALSE	canonical	0	0	junction_1	9.29090887127416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAACAAAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-39	NA	21108020	21122896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21108475_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_76775_3	chr9	+	1578	4	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8055	27	8055	-27	3prime_fragment	FALSE	canonical	3	21	junction_2	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAACAAAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-39	NA	21116055	21122896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_21116421_21116586_21116710_21117440_21117624_21121989
Isoform_76777_10	chr9	+	2329	8	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	17	4026	4	1	intron_retention	FALSE	canonical	3	466	junction_7	31.0273085773004	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8651	False	NA	22	True	GATAAA	-14	NA	21176605	21185042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931
Isoform_76778_8	chr9	+	2257	9	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	17	4020	4	7	intron_retention	FALSE	canonical	3	441	junction_8	36.9492895736846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8651	False	NA	28	True	GATAAA	-20	NA	21176605	21185048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
Isoform_76779_587	chr9	+	1915	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	10	4026	-3	1	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8644	False	NA	22	True	GATAAA	-14	NA	21176598	21185042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_7678_5	chr11	-	1974	2	ISM	ENSMUSG00000040430.19	ENSMUST00000103064.10	6329	10	-21	128525	-21	-15788	5prime_fragment	FALSE	canonical	3	60	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	107361546	107227242	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_107228387_107360716
Isoform_76780_16	chr9	+	2500	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	17	3434	4	593	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGACTGGCCTTAAACT	8651	False	NA	NA	False	NA	NA	NA	21176605	21185634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_76781_13	chr9	+	1967	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	-42	4026	-42	1	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8592	False	NA	22	True	GATAAA	-14	NA	21176546	21185042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
Isoform_76782_15	chr9	+	1998	9	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	-3	6	intron_retention	FALSE	canonical	3	466	junction_7	31.6462379280697	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTTGTTGACATTTC	8644	False	NA	27	True	GATAAA	-19	NA	21176598	21185047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184207_21184549
Isoform_76784_9	chr9	+	4114	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	2	1	intron_retention	FALSE	canonical	3	72	junction_21	46.6520385236562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCTGGTATGCTTAA	6623	False	NA	17	True	AATAAA	-17	NA	21232036	21266322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
Isoform_76785_9	chr9	+	3579	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	56.9185477184737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6651	False	NA	19	True	AATAAA	-19	NA	21232064	21266324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
Isoform_76786_34	chr9	+	3418	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	60	0	10	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6640	False	NA	19	True	AATAAA	-19	NA	21232053	21266324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
Isoform_76787_8	chr9	+	4128	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5747	False	NA	18	True	AATAAA	-18	NA	21249134	21266323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
Isoform_76788_3	chr9	+	3542	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	56.4293605073877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5778	False	NA	16	True	AATAAA	-16	NA	21249165	21266321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
Isoform_76789_51	chr9	+	3442	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	16	-2	16	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5752	False	NA	18	True	AATAAA	-18	NA	21249139	21266323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
Isoform_7679_4	chr11	-	3689	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	8	8	8	-8	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCATTGTCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	107805873	107765504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
Isoform_76799_5	chr9	+	2607	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-37	1114	-20	29	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCTTTGAGCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	21279213	21311976	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
Isoform_768_11	chr10	-	1736	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	-20	3607	-20	-3607	multi-exon	FALSE	canonical	3	31	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCCATTTTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	33972535	33967417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_33968512_33971893
Isoform_76800_61	chr9	+	3523	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-20	-18	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279213	21316638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_76802_13	chr9	+	3569	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279167	21316638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_76804_6	chr9	+	3499	20	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-20	-18	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	529.673719668514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279213	21316638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_7681_3	chr11	-	2346	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	22	6041	22	-1251	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGTATTTTGTTCCA	6306	False	NA	NA	False	CATAAA	-13	NA	108234732	107830253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
Isoform_76811_5	chr9	+	3698	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-94	2	-29	-2	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTACTTGAGTCTTCATT	NA	False	NA	30	True	AATACA	-19	NA	21279204	21313097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
Isoform_76813_59	chr9	+	3507	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	24	18	24	-18	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279190	21316638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_76814_14	chr9	+	3531	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	0	18	0	-18	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAAAAACAAAAGA	NA	False	NA	97	True	NA	NA	NA	21279166	21316638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
Isoform_76819_7	chr9	+	1158	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	249.047568464389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2378	False	NA	45	True	TATAAA	-31	NA	21323141	21331573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_76821_554	chr9	+	1322	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-2	-4	-2	4	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGTCTGTCTTCT	2367	False	NA	46	True	TATAAA	-32	NA	21323130	21331574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_76824_10	chr9	+	1322	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	21	intron_retention	FALSE	canonical	3	47	junction_9	245.76431548423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAAGCCTCACTGTAG	2378	False	NA	63	True	NA	NA	NA	21323141	21331591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331337
Isoform_76826_8	chr9	+	1320	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	2	4	intron_retention	FALSE	canonical	3	37	junction_5	251.720205244623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGTGTCTGTCTTCT	2379	False	NA	46	True	TATAAA	-32	NA	21323142	21331574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
Isoform_76832_14	chr9	+	2379	13	ISM	ENSMUSG00000033335.18	ENSMUST00000169194.9	1591	15	-280	931	-5	-931	5prime_fragment	FALSE	canonical	2	447	junction_9	75.2619038203703	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGCATGTAATTTTT	5897	False	NA	NA	False	ATTAAA	-20	NA	21336258	21401791	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038
Isoform_76834_220	chr9	+	3500	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	4	-2	4	2	multi-exon	FALSE	canonical	2	327	junction_20	112.703715555433	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5883	False	NA	22	True	AATAAA	-32	NA	21336244	21418438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
Isoform_76836_111	chr9	+	3513	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	-4	1	-4	-1	multi-exon	TRUE	canonical	2	185	junction_20	132.122244531343	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	5862	False	NA	17	True	AATAAA	-27	NA	21336223	21418433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
Isoform_76838_81	chr9	+	3009	21	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	2	156	junction_20	136.611712528612	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCAGATGTGTCT	5897	False	NA	16	True	AATAAA	-17	NA	21336258	21419051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
Isoform_7684_34	chr11	-	2184	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	157	13	62	-13	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	3031	False	NA	NA	False	NA	NA	NA	109363963	109343564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_76841_368	chr9	+	3507	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	224	junction_13	132.11218266634	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5862	False	NA	20	True	AATAAA	-30	NA	21336223	21418436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
Isoform_76843_164	chr9	+	3497	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	185	junction_19	149.780670673753	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	5866	False	NA	17	True	AATAAA	-27	NA	21336227	21418433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
Isoform_76845_125	chr9	+	3028	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	156	junction_19	153.943760641486	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCAGATGTGTCT	5866	False	NA	16	True	AATAAA	-17	NA	21336227	21419051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
Isoform_76847_4	chr9	+	3316	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115394.8	3320	15	-8	12	2	-12	multi-exon	FALSE	canonical	3	1025	junction_5	69.6438461468237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAGAAAAGCCTGCAA	NA	False	NA	8	True	AATAAA	-10	NA	21458210	21500751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146
Isoform_76848_189	chr9	+	3189	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	25	6	-4	-6	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCCTGCAAAACAGC	NA	False	NA	14	True	AATAAA	-16	NA	21458214	21500757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
Isoform_7685_20	chr11	-	2274	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	67	13	-28	-13	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	2941	False	NA	NA	False	NA	NA	NA	109364053	109343564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_76852_8	chr9	+	3117	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	9	26	-1	-6	multi-exon	FALSE	canonical	3	70	junction_14	283.604972827073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCCTGCAAAACAGC	NA	False	NA	14	True	AATAAA	-16	NA	21458217	21500757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
Isoform_76855_128	chr9	+	2932	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	215	23	215	-23	multi-exon	FALSE	canonical	3	163	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	4726	False	NA	11	True	ATTAAA	-20	NA	21504232	21507243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21504367_21504445
Isoform_76868_37	chr9	+	5433	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	80	863	-15	1	multi-exon	FALSE	non_canonical	0	0	junction_28	138.291543357457	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1317	False	NA	23	True	AATAAA	-20	NA	21527544	21614663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_7687_3	chr11	-	2103	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	310	-59	215	59	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTACAGGTGAATTATTT	3184	False	NA	NA	False	ATTAAA	-18	NA	109363810	109343492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
Isoform_76871_32	chr9	+	5431	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	73	850	-22	1	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1310	False	NA	23	True	AATAAA	-20	NA	21527537	21614663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_76873_18	chr9	+	5396	34	FSM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	10	-1	10	1	multi-exon	FALSE	canonical	3	225	junction_29	114.960846930185	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1342	False	NA	23	True	AATAAA	-20	NA	21527569	21614663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
Isoform_7688_5	chr11	-	2418	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070152.12	4219	6	-83	1884	-83	-13	multi-exon	FALSE	canonical	0	0	junction_5	13.6440463206484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	2487	False	NA	NA	False	NA	NA	NA	109364507	109343564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109364073
Isoform_76889_6	chr9	+	1964	10	FSM	ENSMUSG00000032193.10	ENSMUST00000217111.2	2854	10	-26	916	14	0	multi-exon	FALSE	canonical	3	262	junction_7	24.2807651352991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	1903	False	NA	NA	False	NA	NA	NA	21634908	21651382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944
Isoform_7689_137	chr11	-	2126	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1379	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	1191	False	NA	NA	False	NA	NA	NA	109365803	109343564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
Isoform_76890_96	chr9	+	4498	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	127	2	11	2	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCATCCTTATGTG	1900	False	NA	14	True	ATTAAA	-13	NA	21634905	21661213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
Isoform_76891_123	chr9	+	4465	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	156	6	0	-1	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTTGTCATCCTTA	1929	False	NA	10	True	ATTAAA	-9	NA	21634934	21661209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
Isoform_76898_5	chr9	+	2627	10	NIC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	8.37692303332034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCCTTCTGCCTGCC	82	False	NA	NA	False	AATAAA	-18	NA	21848313	21860202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
Isoform_76899_7	chr9	+	2642	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	-15	-1	-15	1	multi-exon	TRUE	canonical	3	9	junction_8	8.89999306422257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTTCTGCCTGC	82	False	NA	NA	False	AATAAA	-17	NA	21848313	21860201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
Isoform_769_3	chr10	-	625	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	466	3	466	-3	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTGTTTCTCCCAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	34003514	34002065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34002563_34003386
Isoform_76900_76	chr9	+	1836	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	2	0	2	0	multi-exon	FALSE	canonical	3	72	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGACTCTGGTGGTCTG	NA	False	NA	8	True	NA	NA	NA	21867052	21869560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21867301_21867972
Isoform_76901_244	chr9	+	2007	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	5	0	5	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914318	21925518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_76903_22	chr9	+	2220	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-208	0	4	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914105	21925518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_76904_171	chr9	+	2028	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-43	-2	5	0	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914318	21925518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_76906_12	chr9	+	2258	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-270	-5	-10	3	multi-exon	TRUE	canonical	3	290	junction_11	154.653737577573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTTTTTAATTTC	NA	False	NA	23	True	AATAAA	-19	NA	21914091	21925521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_7691_5	chr11	-	2202	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1382	60	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGGTGAATTATTTT	1188	False	NA	NA	False	ATTAAA	-19	NA	109365806	109343491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
Isoform_76910_45	chr9	+	2011	18	FSM	ENSMUSG00000003402.15	ENSMUST00000216344.2	2228	18	217	0	5	0	multi-exon	FALSE	canonical	3	150	junction_1	191.361611709314	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914318	21925518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_76912_35	chr9	+	2037	18	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	210.71322284977	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
Isoform_76916_324	chr9	+	690	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	0	5	0	-5	multi-exon	FALSE	canonical	3	566	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTTTCTTCTAAGAT	NA	False	NA	39	True	AATAAA	-39	NA	22068141	22069649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22068210_22069027
Isoform_76917_34	chr9	+	727	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	-37	-14	-37	14	multi-exon	FALSE	canonical	3	126	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTTCATCCAAAGACT	NA	False	NA	25	True	AATAAA	-25	NA	22068204	22069635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22068324_22069027
Isoform_76918_18	chr9	+	936	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	0	-339	0	339	multi-exon	FALSE	canonical	3	166	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	749	False	NA	NA	False	NA	NA	NA	22137018	22147141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22137129_22146315
Isoform_76921_9	chr9	+	3026	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-43	-1670	-5	1018	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	735	False	NA	NA	False	NA	NA	NA	22137004	22152409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
Isoform_76926_6	chr9	+	1116	2	ISM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	21	19669	-14	-10093	5prime_fragment	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTGTGTTCTCTGACTA	NA	False	NA	NA	False	AATAAA	-14	NA	22322829	22336308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_22323046_22335408
Isoform_76927_8	chr9	+	2210	7	FSM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	19	-6	-16	6	multi-exon	FALSE	canonical	2	6	junction_3	3.62476052848859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGTTCTTATTTTATAC	NA	False	NA	NA	False	ATTAAA	-20	NA	22322827	22355983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22323046_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
Isoform_76928_4	chr9	+	3419	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	7	-1	-2	1	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387024	22799571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_7693_19	chr11	-	2040	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	10	0	10	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502248	109464156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_76930_11	chr9	+	3358	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	19	5	3	1	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387029	22799571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_76932_8	chr9	+	3564	23	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-3	1	intron_retention	FALSE	canonical	3	12	junction_1	19.496609156339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387014	22799571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_76933_8	chr9	+	3487	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	9	-1	9	1	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAACTGGACTGAATT	NA	False	NA	-2	True	AATAAA	-15	NA	22387035	22799571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
Isoform_76944_170	chr9	+	2313	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGCAGTGTCTTGTA	NA	False	NA	16	True	AATAAA	-16	NA	25163943	25219861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
Isoform_76945_23	chr9	+	2355	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGCAGTGTCTTGTA	NA	False	NA	16	True	AATAAA	-16	NA	25163901	25219861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
Isoform_76949_27	chr9	+	2713	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	10	0	10	0	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGGAATGGTTT	NA	False	NA	15	True	AATAAA	-23	NA	25392852	25515406	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
Isoform_7695_13	chr11	-	3331	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	10	-3	10	3	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	109502248	109465954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_76950_4	chr9	+	775	5	FSM	ENSMUSG00000035443.11	ENSMUST00000214910.2	774	5	4	-5	4	5	multi-exon	FALSE	canonical	3	72	junction_3	235.013829380315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATTGAGTTTTAGAACA	NA	False	NA	8	True	AATAAA	-22	NA	26911009	26917232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852
Isoform_76952_10	chr9	+	764	7	NIC	ENSMUSG00000035443.11	novel	775	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	210.647744403357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911005	26918629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_76953_7	chr9	+	792	5	ISM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	1395	0	4	5prime_fragment	FALSE	canonical	3	529	junction_1	46.8634985889871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATTGAGTTTTAGAAC	NA	False	NA	7	True	AATAAA	-21	NA	26911005	26917231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852
Isoform_76954_4	chr9	+	1126	7	ISM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-3	1	-1	0	intron_retention	FALSE	canonical	3	246	junction_6	139.557335887441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911014	26918629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096
Isoform_76955_113	chr9	+	928	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-12	2	0	-1	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26911005	26918628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
Isoform_76956_37	chr9	+	965	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-48	1	-36	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26910969	26918629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
Isoform_76958_177	chr9	+	777	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	-2	0	-1	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26911005	26918628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_76960_14	chr9	+	954	6	NIC	ENSMUSG00000035443.11	novel	1107	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	323	junction_5	122.182486470034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26911014	26918629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
Isoform_76963_24	chr9	+	5059	35	FSM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	80	10	80	-9	multi-exon	FALSE	canonical	3	212	junction_3	21.5907395566265	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAATATAACCTAGCA	NA	False	NA	NA	False	AATAAA	-6	NA	26942024	27006598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
Isoform_76964_26	chr9	+	4844	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-72	990	-72	-990	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTTGTGAAATTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	30338331	30377032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
Isoform_76965_3	chr9	+	4657	10	NIC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-72	-992	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	12.7898493702459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGGTTGTGAAATT	NA	False	NA	NA	False	ATTAAA	-11	NA	30338331	30377030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30374515_30374604_30375581
Isoform_76966_21	chr9	+	3648	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-18	1	-18	-1	multi-exon	FALSE	canonical	3	22	junction_2	5.53257399408268	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGTCTAGTCTGGT	NA	False	NA	NA	False	ACTAAA	-17	NA	30853839	30874151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
Isoform_76968_8	chr9	+	3744	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-113	0	-113	0	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTCTAGTCTGGTT	NA	False	NA	NA	False	ACTAAA	-18	NA	30853744	30874152	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
Isoform_76978_87	chr9	+	3434	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-245	5672	-243	-20	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941696	30981509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
Isoform_7698_3	chr11	-	1214	8	FSM	ENSMUSG00000041895.16	ENSMUST00000106689.2	1220	8	13	-7	13	7	multi-exon	FALSE	canonical	3	112	junction_2	3.73619909446343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCACGGGGGACTCGG	NA	False	NA	NA	False	ATTAAA	-27	NA	109502245	109472890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
Isoform_76988_7	chr9	+	2501	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-282	6642	-280	-348	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGCTGACTTAGAACA	NA	False	NA	NA	False	CATAAA	-17	NA	30941659	30980539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
Isoform_7699_12	chr11	-	1850	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCTCTGTAAATGTTG	NA	False	NA	NA	False	TATAAA	-12	NA	113092666	112934731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_112935987_112958167_112958213_113092116
Isoform_76998_35	chr9	+	3661	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-253	-20	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941686	30981509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
Isoform_770_3	chr10	-	736	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	357	1	357	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTTCTCCCAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	34003623	34002063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34002563_34003386
Isoform_7700_3	chr11	-	1806	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTCTGTAAATGTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	113092666	112934730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_112935987_113092116
Isoform_77002_13	chr9	+	3378	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-241	20	-241	-20	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTATGAAGCCACGA	NA	False	NA	12	True	ATTAAA	-15	NA	30941698	30981509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
Isoform_77005_10	chr9	+	1945	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	12	-5	1	5	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTCTTGTTTTTTGG	NA	False	NA	NA	False	AATAAA	-26	NA	31191845	31241919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
Isoform_77007_8	chr9	+	5182	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297500	31332627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_77008_8	chr9	+	5189	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	-29	1	-29	-1	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGGCCTTTAATCAT	NA	False	NA	5	True	ATTAAA	-13	NA	31297458	31332628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
Isoform_7701_18	chr11	-	2733	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	15	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	210.166029605167	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCTGTGTTCCGTGC	7784	False	NA	-6	True	AATAAA	-15	NA	113456567	113135682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136702_113136724_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
Isoform_77010_4	chr9	+	2322	8	FSM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	-17	2775	-17	41	multi-exon	FALSE	canonical	1	1	junction_6	2.24971653543195	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCTCAGTATTGCAGT	NA	False	NA	NA	False	NA	NA	NA	32607300	32666341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649656_32664094_32664214_32665508
Isoform_77015_349	chr9	+	2955	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	28	10	28	-10	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGCCTCTTAGGTT	5540	False	NA	-7	True	AATAAA	-8	NA	35122478	35128300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
Isoform_77017_295	chr9	+	1799	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	16	6	16	-6	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	35179176	35187255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
Isoform_77019_4	chr9	+	1908	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	13	-100	13	100	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGGTGTGTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	35179173	35187361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
Isoform_7702_79	chr11	-	2708	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-21	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_77020_11	chr9	+	1873	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	16	-6	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGTTTTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	35179176	35187255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
Isoform_77021_3	chr9	+	2317	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	2	-303	2	4	multi-exon	FALSE	canonical	3	99	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTCTTTTTCAAGG	NA	False	NA	16	True	ATTAAA	-16	NA	35470763	35478438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35470814_35476079_35476494_35476585
Isoform_77022_32	chr9	+	1732	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	27	260	21	3	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTTCTTTTTCAAG	NA	False	NA	15	True	ATTAAA	-15	NA	35470782	35478437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
Isoform_77023_5	chr9	+	2009	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	10	0	4	0	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGACCCTTTAGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	35470765	35478697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
Isoform_77024_5	chr9	+	1847	3	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	867	-1	2	1	3prime_fragment	FALSE	canonical	3	88	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTTGTTCTTTTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	35470757	35478435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_35470814_35476079_35477152_35477716
Isoform_77025_4	chr9	+	944	5	NIC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	4.49305018890286	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTCATATATTCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	35481579	35557756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_35481827_35485525_35485684_35518890_35519016_35523067_35523168_35557442
Isoform_77026_32	chr9	+	1694	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	97	3	17	1	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGGTTTTTGG	NA	False	NA	15	True	AATAAA	-15	NA	36744076	36790217	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
Isoform_77027_32	chr9	+	1730	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	62	2	-18	2	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCATGGTTTTTGGA	NA	False	NA	16	True	AATAAA	-16	NA	36744041	36790218	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
Isoform_77028_20	chr9	+	1049	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	94	1476	94	-1476	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTTTGCTTAG	NA	False	NA	55	True	NA	NA	NA	37119612	37134520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
Isoform_77029_3	chr9	+	1182	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	-41	1478	-41	-1478	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATTTAGTGTTTGCTT	NA	False	NA	53	True	NA	NA	NA	37119477	37134518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
Isoform_7703_81	chr11	-	2656	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	187.885736552832	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7771	False	NA	-3	True	AATAAA	-18	NA	113456580	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_77030_3	chr9	+	2392	6	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-18	33	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	102.024702891016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGTGCTAGTTGAG	377	False	NA	NA	False	TTTAAA	-40	NA	37400596	37435479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_37401130_37402751_37402866_37424909_37425000_37428668_37428769_37430022_37430084_37433985
Isoform_77031_3	chr9	+	2434	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-16	35	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	103.639700404816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	379	False	NA	NA	False	TTTAAA	-42	NA	37400598	37435481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_37401130_37424909_37425000_37428512_37428769_37430022_37430084_37433985
Isoform_77032_5	chr9	+	2279	5	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-16	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	97.7010747126151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	379	False	NA	NA	False	TTTAAA	-43	NA	37400598	37435482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_37401130_37424909_37425000_37428668_37428769_37430022_37430084_37433985
Isoform_77033_10	chr9	+	2344	4	FSM	ENSMUSG00000042138.10	ENSMUST00000048604.8	2291	4	-18	-35	-16	35	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	379	False	NA	NA	False	TTTAAA	-42	NA	37400598	37435481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
Isoform_77034_38	chr9	+	2188	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-297	-1468	-16	35	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	379	False	NA	NA	False	TTTAAA	-42	NA	37400598	37435481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
Isoform_77035_3	chr9	+	2089	3	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-19	33	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	110.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGTGCTAGTTGAG	376	False	NA	NA	False	TTTAAA	-40	NA	37400595	37435479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_37401130_37430022_37430084_37433985
Isoform_77038_9	chr9	+	3388	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	157	1402	0	-2	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCAGCGTTTCCAGTT	NA	False	NA	NA	False	AATATA	-12	NA	37525122	37559549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_77040_4	chr9	+	4189	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	158	600	1	-600	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTTATTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	37525123	37560351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_77041_3	chr9	+	4807	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	141	-1	-16	1	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37525106	37560952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
Isoform_77042_3	chr9	+	3845	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	36	276	32	-276	multi-exon	TRUE	canonical	2	10	junction_6	2.97449918967259	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTATACTGTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	38629599	38654357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
Isoform_77044_4	chr9	+	2003	7	FSM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	-64	2215	-14	633	multi-exon	FALSE	canonical	0	0	junction_1	4.57043640026736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AAGAAA	-8	NA	40597243	40694400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_40597656_40672196_40672355_40682400_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
Isoform_77045_5	chr9	+	1125	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86454	2216	-1628	632	3prime_fragment	FALSE	canonical	3	9	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AAGAAA	-7	NA	40683761	40694399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
Isoform_77049_29	chr9	+	2394	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	0	0	0	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2167	False	NA	10	True	AATAAA	-20	NA	40712279	40716496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_7705_13	chr11	-	2660	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26085	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.740434823617	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	NA	False	NA	-3	True	AATAAA	-18	NA	113482690	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
Isoform_77050_26	chr9	+	2416	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	-24	2	-24	-1	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2143	False	NA	8	True	AATAAA	-18	NA	40712255	40716494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77053_35	chr9	+	2203	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2457	False	NA	10	True	AATAAA	-20	NA	40712569	40716496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
Isoform_77054_8	chr9	+	2182	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3928	junction_3	5605.38982605499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2459	False	NA	8	True	AATAAA	-18	NA	40712571	40716494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77055_4	chr9	+	2222	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	7746	junction_3	4368.47570669679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTCCTGACTGAGTTA	2456	False	NA	12	True	AATAAA	-22	NA	40712568	40716498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40712645_40713213_40713424_40713713_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77056_7	chr9	+	2391	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_2	6450.55656513452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2459	False	NA	9	True	AATAAA	-19	NA	40712571	40716495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77058_9	chr9	+	2290	9	NIC	ENSMUSG00000015656.18	novel	514	3	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	7902.13270955221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2543	False	NA	10	True	AATAAA	-20	NA	40712655	40716496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40712917_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77060_7	chr9	+	2673	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	3928	junction_2	6440.2006179932	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2457	False	NA	10	True	AATAAA	-20	NA	40712569	40716496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77061_18	chr9	+	2236	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	727	0	250	0	3prime_fragment	FALSE	canonical	3	3928	junction_2	6440.2006179932	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2894	False	NA	10	True	AATAAA	-20	NA	40713006	40716496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
Isoform_77064_3	chr9	+	2767	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3928	junction_2	6679.63991045426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACAGTTGTCCTGACTG	2459	False	NA	7	True	AATAAA	-17	NA	40712571	40716493	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
Isoform_77067_3	chr9	+	5884	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-238	7	-238	-7	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCCAAGTGCCTC	NA	False	NA	NA	False	AATAAA	-7	NA	43655042	43718751	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
Isoform_77068_12	chr9	+	5657	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-10	6	-10	-6	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCCAAGTGCCTCT	NA	False	NA	NA	False	AATAAA	-8	NA	43655270	43718752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
Isoform_7707_17	chr11	-	2769	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.137222378063	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7771	False	NA	-3	True	AATAAA	-18	NA	113456580	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
Isoform_77070_5	chr9	+	2539	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-47	3161	-47	-1575	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGGAGCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	43655233	43715597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
Isoform_77071_11	chr9	+	1705	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	28	2	28	-2	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGTGTCTGTCTCTT	NA	False	NA	32	True	AATAAA	-18	NA	43954708	43959874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
Isoform_77072_38	chr9	+	2117	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	57	1693	0	1	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	43978374	44005231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_77073_3	chr9	+	2245	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	-48	1670	-48	24	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	43978269	44005254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_77075_14	chr9	+	2151	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	23	1693	23	1	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	43978340	44005231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_77076_21	chr9	+	1531	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-19	545	-19	-1	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAACA	2229	False	NA	NA	False	NA	NA	NA	43996216	44005229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_77077_3	chr9	+	1512	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	24	521	13	23	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	2272	False	NA	NA	False	NA	NA	NA	43996259	44005253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
Isoform_77078_14	chr9	+	2880	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	99	10	0	-7	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	7	False	NA	9	True	AATAAA	-11	NA	44045957	44054014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
Isoform_77079_47	chr9	+	1930	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	-19	294	-19	-288	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGCATCCCCTCCCTCT	3755	False	NA	23	True	AATAAA	-26	NA	44238122	44244903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_7708_36	chr11	-	2675	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.525785743237	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_77082_3	chr9	+	1781	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	-25	294	3	-294	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3777	False	NA	17	True	AATAAA	-20	NA	44238144	44244897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
Isoform_77086_555	chr9	+	4372	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	53	7	-3	-1	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290839	44303659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_77088_13	chr9	+	4400	26	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	163.052806170271	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTTTGCTTCTTCCC	NA	False	NA	4	True	AATAAA	-20	NA	44290896	44303663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_44290974_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_77089_69	chr9	+	4455	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	33	1	-17	-1	multi-exon	FALSE	canonical	3	92	junction_1	153.155429547894	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290902	44303659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_7709_69	chr11	-	2653	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.470816236082	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7771	False	NA	-3	True	AATAAA	-18	NA	113456580	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_77091_93	chr9	+	4638	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	-4	-1260	-4	-1	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290915	44303659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
Isoform_771_3	chr10	-	801	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	292	1	292	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTTCTCCCAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	34003688	34002063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34002563_34003386
Isoform_7710_16	chr11	-	2633	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26061	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.881966828977	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	NA	False	NA	-3	True	AATAAA	-18	NA	113482666	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
Isoform_77102_6	chr9	+	2130	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	2	-4	2	-2	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308150	44314261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_77104_8	chr9	+	2072	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	60	-4	60	-2	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308208	44314261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_77105_7	chr9	+	2374	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	-34	4	-30	-2	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308361	44314261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_77106_9	chr9	+	2367	9	NIC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.7740740252177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGGCTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	44308395	44314261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_44308771_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
Isoform_77109_1439	chr9	+	520	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	523	237	2	1	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGGGTGCATCTGTT	NA	False	NA	90	True	AATAAA	-15	NA	44318958	44321487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
Isoform_7711_5	chr11	-	2632	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.265851709358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	7755	False	NA	-4	True	AATAAA	-17	NA	113456596	113135680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113452831_113452951_113456501
Isoform_77110_2812	chr9	+	486	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	557	237	1	1	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	2812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGGGTGCATCTGTT	NA	False	NA	90	True	AATAAA	-15	NA	44318992	44321487	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
Isoform_77117_3	chr9	+	5906	10	NIC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-18	-31	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	7.10416327250924	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAGATTGAGA	1900	False	NA	8	True	NA	NA	NA	44394103	44421688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_44394784_44400951_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
Isoform_77118_31	chr9	+	2521	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-42	3550	-38	-3550	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44516150	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_77119_35	chr9	+	2483	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-4	3550	0	-3550	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44516188	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_77122_16	chr9	+	2614	15	NNC	ENSMUSG00000032097.11	novel	6029	14	NA	NA	-41	-3550	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.2161054028644	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44516147	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_44516250_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_77123_28	chr9	+	2508	14	FSM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	7	3550	2	-3550	multi-exon	FALSE	canonical	2	6	junction_1	9.15352294193447	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44516195	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44516282_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_77125_5	chr9	+	2592	15	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	8	-3550	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5742941778013	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44516201	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_44516282_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_77127_121	chr9	+	1568	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-196	-313	-3	2	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684253	44702190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
Isoform_7713_10	chr11	-	2747	10	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	159.75845965738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
Isoform_77132_376	chr9	+	2904	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	198	5	-73	-5	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATGATTTTTATTA	NA	False	NA	10	True	AATAAA	-13	NA	44953920	44965308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
Isoform_7714_63	chr11	-	2657	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	6	1	6	-1	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
Isoform_77141_14	chr9	+	3185	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	-83	5	-83	-5	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATGATTTTTATTA	NA	False	NA	10	True	AATAAA	-13	NA	44953639	44965308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
Isoform_77143_16	chr9	+	3420	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	4	0	2	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	27	True	AATAAA	-20	NA	44966487	44988734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
Isoform_77144_370	chr9	+	1533	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	255	0	-2	0	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	623	False	NA	18	True	AATAAA	-22	NA	45281737	45307453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77149_299	chr9	+	1548	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	235	6	-22	-2	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGACTCTGAGTGGCTTT	603	False	NA	16	True	AATAAA	-20	NA	45281717	45307451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77150_18	chr9	+	1959	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	-173	3	-173	1	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGAGTGGCTTTTCT	195	False	NA	19	True	AATAAA	-23	NA	45281309	45307454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77151_331	chr9	+	1515	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	268	6	11	-2	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGACTCTGAGTGGCTTT	636	False	NA	16	True	AATAAA	-20	NA	45281750	45307451	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77152_20	chr9	+	1766	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	16	7	16	-3	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGACTCTGAGTGGCTT	384	False	NA	15	True	AATAAA	-19	NA	45281498	45307450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77153_27	chr9	+	1712	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	73	4	73	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	441	False	NA	18	True	AATAAA	-22	NA	45281555	45307453	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77154_18	chr9	+	1869	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	-85	5	-85	-1	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	283	False	NA	17	True	AATAAA	-21	NA	45281397	45307452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_7716_7	chr11	-	2744	10	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	160.004012295371	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
Isoform_77161_14	chr9	+	1341	4	ISM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	21347	-2	21090	-2	3prime_fragment	FALSE	canonical	3	999	junction_2	48.787521173167	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGAGTGGCTTTTCTT	3409	False	NA	20	True	AATAAA	-24	NA	45302829	45307455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_45302896_45303512_45303563_45303973_45304024_45306280
Isoform_77162_27	chr9	+	589	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	43	0	-33	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314478	45321576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
Isoform_77164_3	chr9	+	1667	7	ISM	ENSMUSG00000032087.12	ENSMUST00000239429.2	6336	33	55	80204	55	11	5prime_fragment	FALSE	canonical	0	0	junction_3	2.98142396999972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTTGCCATCTTTGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	45341645	45584258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_45341811_45358962_45359281_45361779_45361927_45572430_45572578_45579286_45579566_45581293_45581570_45583923
Isoform_77167_6	chr9	+	4108	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	1950	0	-35	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTCCTGAAAAATGACT	7298	False	NA	NA	False	NA	NA	NA	45749877	45773747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
Isoform_77168_24	chr9	+	3397	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	488	-9	0	-5	multi-exon	FALSE	canonical	3	28	junction_7	6.25	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCACCACTCCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	45818282	45841019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
Isoform_7717_45	chr11	-	2632	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.708309006834	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7771	False	NA	-3	True	AATAAA	-18	NA	113456580	113135679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
Isoform_77170_20	chr9	+	3442	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	443	-9	-45	-5	multi-exon	FALSE	canonical	3	28	junction_7	6.25	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCACCACTCCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	45818237	45841019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
Isoform_77172_14	chr9	+	2637	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-14	19384	-14	6	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAACTGTGGGTGTTTT	NA	False	NA	12	True	AATAAA	-20	NA	45924147	46114189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
Isoform_77173_3	chr9	+	3485	6	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	197890	105	-8861	-99	3prime_fragment	FALSE	canonical	3	47	junction_1	6.54217089351845	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGCTTTTGTCCTTG	2987	False	NA	-82	True	NA	NA	NA	46122007	46135387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_77174_3	chr9	+	3570	6	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	197902	8	-8849	-2	3prime_fragment	FALSE	canonical	3	47	junction_1	6.54217089351845	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGATATGTTGTTTGC	2999	False	NA	15	True	AATAAA	-17	NA	46122019	46135484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
Isoform_77175_8	chr9	+	2892	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	90	2	-39	-2	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTGGTACAGCGTCCA	NA	False	NA	NA	False	AATAAA	-16	NA	46184451	46193939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_77176_41	chr9	+	1842	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	103	1039	-26	120	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	14	True	ATTAAA	-21	NA	46184464	46192902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_77178_3	chr9	+	1713	13	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	335	1046	191	113	3prime_fragment	FALSE	canonical	3	619	junction_7	52.9320843681368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGACACCCGCCTCTGCGT	NA	False	NA	7	True	ATTAAA	-14	NA	46184696	46192895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
Isoform_77181_268	chr9	+	2203	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	8	328	8	-1	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTCCTAACTGGGTAT	NA	False	NA	44	True	AATAAA	-21	NA	46194313	46210080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
Isoform_77182_3	chr9	+	3412	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	6	-879	6	879	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCTTGTACACACTTTC	NA	False	NA	NA	False	NA	NA	NA	46194311	46211287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
Isoform_77183_8	chr9	+	2385	7	FSM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	-24	-1249	-3	1249	multi-exon	FALSE	canonical	3	300	junction_2	18.6904610251682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGCAAACGTCTAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	47441646	47726601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
Isoform_77185_22	chr9	+	1457	9	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	141	20862	0	-4723	5prime_fragment	FALSE	canonical	3	173	junction_8	54.4885309033011	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	47441649	47741023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
Isoform_77186_3	chr9	+	2089	12	FSM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	141	-446	0	4	multi-exon	FALSE	canonical	2	3	junction_9	125.413102509234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441649	47762331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47748014_47748069_47759464_47759597_47761569
Isoform_77187_62	chr9	+	2035	11	FSM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	95	-4	0	4	multi-exon	FALSE	canonical	3	105	junction_9	77.3110600108419	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441649	47762331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
Isoform_7719_5	chr11	-	2672	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-26122	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.840353981971	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113482727	113135680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
Isoform_77190_73	chr9	+	2002	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	95	2347	0	4	multi-exon	FALSE	canonical	3	143	junction_8	60.0832755431992	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441649	47762331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
Isoform_77196_238	chr9	+	4223	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-90	0	0	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896674	48953810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_77198_10	chr9	+	4264	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-131	0	-41	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896633	48953810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_772_25	chr10	-	3929	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	463	-3	-175	3	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083248	34027385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_77203_5	chr9	+	4146	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-37	0	2	0	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896676	48953810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_77204_4	chr9	+	4245	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_2	165.889491081918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896709	48953810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_48896838_48911650_48911786_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
Isoform_77205_4	chr9	+	1447	5	FSM	ENSMUSG00000032264.10	ENSMUST00000215706.2	1272	5	-169	-6	0	6	multi-exon	FALSE	canonical	3	254	junction_4	30.2189923723476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAGAGCAT	NA	False	NA	NA	False	NA	NA	NA	48966912	48973311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354
Isoform_77207_296	chr9	+	2873	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-9	-1	-9	1	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGTGTCTTTAATAAC	NA	False	NA	21	True	AGTAAA	-17	NA	48966903	48990073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
Isoform_77209_26	chr9	+	1339	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	5	345	3	-345	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCGAAATGTGCTAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	50405829	50416437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
Isoform_7721_160	chr11	-	2526	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	91	2	91	-2	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGCCTAATTGGTTGG	NA	False	NA	-10	True	ATTAAA	-22	NA	113574890	113552146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77210_109	chr9	+	511	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	6	1	6	-1	multi-exon	FALSE	canonical	3	1341	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTTCTTCTAAATCC	8819	False	NA	20	True	AATAAA	-14	NA	50515215	50516619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50515340_50516232
Isoform_77211_388	chr9	+	485	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	32	1	32	-1	multi-exon	FALSE	canonical	3	1341	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTTCTTCTAAATCC	8845	False	NA	20	True	AATAAA	-14	NA	50515241	50516619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50515340_50516232
Isoform_77214_7	chr9	+	932	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	102	-88	-11	1	multi-exon	FALSE	canonical	3	16	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACCTGCCTCGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	50664308	50667931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50664778_50665811_50665935_50667591
Isoform_77215_15	chr9	+	1970	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	19	669	4	10	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTGGTTTTGTTTT	NA	False	NA	12	True	AAAAAG	-27	NA	50679554	50683979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
Isoform_77217_5	chr9	+	2640	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	16	2	1	-2	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGGAGCATGTGTCC	NA	False	NA	NA	False	NA	NA	NA	50679551	50684646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
Isoform_77218_120	chr9	+	2587	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	300	-14	14	0	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTTTCAGTCTGCT	NA	False	NA	38	True	TTTAAA	-45	NA	50686618	50754842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_7722_25	chr11	-	2635	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574997	113552144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77220_11	chr9	+	2701	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	286	-114	0	100	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTAGTCTGAGGCCATT	NA	False	NA	138	True	AATAGA	-20	NA	50686604	50754942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77221_5	chr9	+	3418	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	279	-824	-7	810	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGTAGTTGAATGAA	NA	False	NA	NA	False	AGTAAA	-10	NA	50686597	50755652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77222_3	chr9	+	1920	14	NIC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	54.0913100459326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTATGTCAAAGTCTAA	NA	False	NA	NA	False	NA	NA	NA	50686604	50754292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50754033
Isoform_77223_7	chr9	+	2470	14	NIC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	55.2657913388354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTTTAATGTTTCAGT	NA	False	NA	33	True	TTTAAA	-40	NA	50686607	50754837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77224_32	chr9	+	2519	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	0	11	0	3	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGATTTTTTTAATGT	NA	False	NA	27	True	TTTAAA	-34	NA	50686604	50754831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77225_3	chr9	+	2610	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	15	-95	15	95	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAAAGTAGTCTGAGG	NA	False	NA	133	True	AATAGA	-15	NA	50686619	50754937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77227_3	chr9	+	2753	15	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	52	-6	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.3522794004038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTGTTTTAAGATTT	NA	False	NA	18	True	TTTAAA	-25	NA	50686897	50754822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77228_6	chr9	+	2752	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTTTTTAATGTTTC	NA	False	NA	30	True	TTTAAA	-37	NA	50686839	50754834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_77229_3	chr9	+	2857	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-6	97	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAGTCTGAGGCC	NA	False	NA	135	True	AATAGA	-17	NA	50686839	50754939	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
Isoform_7723_110	chr11	-	2585	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	34	0	34	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574947	113552144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77231_448	chr9	+	3204	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	34	192	5	-192	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAATTGTGTAAATGC	21	True	NA	6	True	ATTAAA	-12	NA	50768270	50792539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_77233_8	chr9	+	3581	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	34	-185	5	185	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTACCCCCCAGCCTTG	21	True	NA	NA	False	AATAAA	-19	NA	50768270	50792916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_77235_23	chr9	+	3251	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	-13	192	0	-192	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAATTGTGTAAATGC	NA	False	NA	6	True	ATTAAA	-12	NA	50768223	50792539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
Isoform_77246_31	chr9	+	4227	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	153	0	-3	0	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959567	52000029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
Isoform_77247_6	chr9	+	4532	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-154	2	-154	-2	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGGAGGTCCGCTG	NA	False	NA	13	True	AATAAA	-13	NA	51959260	52000027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
Isoform_77248_3	chr9	+	3802	10	NNC	ENSMUSG00000032050.19	novel	4131	14	NA	NA	17385	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	279.94642344563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGAGGTCCGCTGTTG	NA	False	NA	16	True	AATAAA	-16	NA	51976955	52000030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984451_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
Isoform_77252_63	chr9	+	3498	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	48	96	48	-96	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAACTCCATGTACTTT	9320	False	NA	NA	False	AATAAA	-20	NA	53295372	53313071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
Isoform_77254_9	chr9	+	3586	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-44	100	-44	-100	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGAACTCCATGTA	9228	False	NA	NA	False	AATAAA	-16	NA	53295280	53313067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
Isoform_7726_317	chr11	-	933	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	91	1595	91	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574890	113553739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77260_21	chr9	+	4279	17	ISM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-6	3181	-6	-3181	5prime_fragment	TRUE	canonical	3	111	junction_15	17.5275452859207	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAAATCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	53448340	53482461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346
Isoform_77262_4	chr9	+	4102	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	0	-3181	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	33.0988871743437	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAAATCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	53448346	53482461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346
Isoform_77263_132	chr9	+	2343	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	215	0	215	0	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	39	True	ATTAAA	-15	NA	53679036	53725438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
Isoform_77265_17	chr9	+	2601	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	-43	0	-43	0	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	39	True	ATTAAA	-15	NA	53678778	53725438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
Isoform_77267_260	chr9	+	2425	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-21	-1	9	1	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGTTTGCATTCTCT	NA	False	NA	36	True	AATAAA	-16	NA	54493773	54511946	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_77269_800	chr9	+	1712	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-30	721	0	4	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCATAATGAATGATGTA	NA	False	NA	50	True	AATAAA	-17	NA	54493764	54511224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
Isoform_7727_60	chr11	-	1012	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	12	1595	12	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574969	113553739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77277_4	chr9	+	1936	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	161	906	161	648	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGTTCTTTGTGCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	54607003	54622693	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
Isoform_77279_58	chr9	+	785	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	17	0	17	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672048	54680394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
Isoform_7728_236	chr11	-	990	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	34	1595	34	-1595	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATCTAGTTTCCATG	NA	False	NA	-23	True	AATAAA	-7	NA	113574947	113553739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113554370_113568129_113568230_113574687
Isoform_77280_61	chr9	+	743	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	59	0	59	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672090	54680394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
Isoform_77282_17	chr9	+	5823	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-55	2	-55	-2	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2571	False	NA	12	True	AATAAA	-17	NA	54771017	54819812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
Isoform_77285_5	chr9	+	2534	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-26	2602	-26	-2602	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	54824540	54854606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
Isoform_77288_1323	chr9	+	1140	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	25	0	0	0	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	1323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	2	True	AATAAA	-15	NA	54858098	54865314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
Isoform_77296_73	chr9	+	2924	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	525	7	-16	-7	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTTGTCACCTTT	NA	False	NA	3	True	AATAAA	-11	NA	55056662	55114806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
Isoform_77298_9	chr9	+	3025	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	424	7	-117	-7	multi-exon	TRUE	canonical	3	762	junction_1	63.2035402489449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTTGTCACCTTT	NA	False	NA	3	True	AATAAA	-11	NA	55056561	55114806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
Isoform_77299_1089	chr9	+	2078	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	33	1	-28	1	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	1089	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTTGTAATTATTGC	NA	False	NA	10	True	AATAAA	-17	NA	55116241	55131716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
Isoform_773_112	chr10	-	3903	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	496	-10	-142	10	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGTGTGCTTCTTCT	NA	False	NA	0	True	AATAAA	-24	NA	34083215	34027378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_77305_3	chr9	+	2328	11	NNC	ENSMUSG00000032313.12	novel	2408	11	NA	NA	9	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.98997487421324	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGCTAGTAGAGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	55234205	55345628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_55234285_55284763_55284898_55287962_55288152_55305024_55305074_55307857_55307932_55321147_55321205_55322223_55322363_55325291_55325408_55337558_55337749_55342474_55342538_55344390
Isoform_77306_8	chr9	+	1370	3	ISM	ENSMUSG00000032313.12	ENSMUST00000034862.5	2408	11	103446	2	97194	-2	3prime_fragment	FALSE	canonical	2	4	junction_1	1	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGGCTAGTAGAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	55337678	55345627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_55337749_55342474_55342538_55344390
Isoform_77307_198	chr9	+	2014	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	-3	0	3	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCTGAGACATTTTCA	973	False	NA	21	True	ATTAAA	-22	NA	55949153	55966364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
Isoform_77314_13	chr9	+	1872	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	-19	10	-19	2	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCGGCACATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55997226	56036162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
Isoform_77315_6	chr9	+	1447	8	FSM	ENSMUSG00000032329.5	ENSMUST00000217518.2	2468	8	-9	1030	0	-1030	multi-exon	FALSE	canonical	3	179	junction_3	24.8160580006954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	56326098	56396535	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897
Isoform_77316_26	chr9	+	1984	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	171	-455	0	455	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	56326098	56398064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
Isoform_77317_5	chr9	+	2171	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	-17	-454	-17	454	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	56325910	56398063	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
Isoform_77320_21	chr9	+	3524	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	203	51	-3	-51	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATGTGCTTGCCTGAC	NA	False	NA	20	True	ATTAAA	-21	NA	56326095	56404169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_77321_10	chr9	+	3559	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	218	1	-3	-1	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTGACCAGTTTTGC	NA	False	NA	10	True	ATTAAA	-16	NA	56326110	56404219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_77323_3	chr9	+	3674	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	11	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.16407915984	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAAGTTGATGTGCTTG	NA	False	NA	14	True	ATTAAA	-15	NA	56325938	56404163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_56326215_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
Isoform_77324_3	chr9	+	1338	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	30	11972	30	-11972	intron_retention	FALSE	canonical	3	166	junction_1	18.1536650722535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	56858191	56878518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537
Isoform_77325_34	chr9	+	1350	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	39	2	39	-2	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGCTTGTGGTTATTC	NA	False	NA	6	True	AATATA	-17	NA	56858200	56890488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
Isoform_77326_5	chr9	+	2796	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	39	-1444	39	1444	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858200	56891934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
Isoform_77328_8	chr9	+	4041	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	59	1	59	-1	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTTAGTTTCATCAA	NA	False	NA	NA	False	TATAAA	-17	NA	56902265	56970090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
Isoform_77329_6	chr9	+	4060	14	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	11.2291885083568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCCTTTTAGTTTCATC	NA	False	NA	NA	False	TATAAA	-15	NA	56902212	56970088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228_56969670_56969701
Isoform_77331_5	chr9	+	4672	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-16	-211	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979307	57035437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_77332_4	chr9	+	5013	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	-18	211	-18	-211	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56983641	57035437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_77336_5	chr9	+	5111	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAACATAAGTCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	56983641	57035643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_77338_7	chr9	+	4889	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	0	-209	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCTAGCTTCTTGTGT	NA	False	NA	23	True	ATTAAA	-27	NA	56983659	57035439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
Isoform_77340_17	chr9	+	3201	26	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	54.0613873295904	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57038057	57049494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_77341_4	chr9	+	605	5	NIC	ENSMUSG00000032295.16	novel	545	5	NA	NA	36	100	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	94.8376902924149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTGCAGTGTATATTT	NA	False	NA	NA	False	NA	NA	NA	57038009	57041539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041416
Isoform_77342_9	chr9	+	3349	27	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	65.9648911460129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043486_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_77343_309	chr9	+	3224	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	81	515	1	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038054	57049491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
Isoform_77344_76	chr9	+	667	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	-24	2	-19	-2	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	353	False	NA	20	True	AATAAA	-20	NA	57428537	57439707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
Isoform_77349_15	chr9	+	2979	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	38	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444883	57450467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
Isoform_77350_7	chr9	+	3042	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	-25	0	10	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444820	57450467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
Isoform_77355_10	chr9	+	2928	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	73	0	-16	0	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGCTGTACTGTGCTG	NA	False	NA	12	True	AATAAA	-12	NA	57444883	57450465	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
Isoform_77358_6	chr9	+	2993	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	10	-2	10	0	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444820	57450467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
Isoform_77359_4	chr9	+	2468	10	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_3	104.968190360958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468226	57496078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57485556_57485686_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
Isoform_77360_138	chr9	+	2328	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	15	-3	0	3	multi-exon	FALSE	canonical	3	243	junction_4	15.3927742788621	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCCTGATGTCAATGGT	NA	False	NA	16	True	AATAAA	-18	NA	57468240	57496081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
Isoform_77363_264	chr9	+	3350	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	20	2338	5	-1242	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTTCCTAGAGTGAAG	NA	False	NA	14	True	AATAAA	-24	NA	57615842	57657444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_77366_5	chr9	+	3946	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	15	1747	0	-651	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTTGGGTCCAATCTG	NA	False	NA	NA	False	AAGAAA	-28	NA	57615837	57658035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_7737_5	chr11	-	1284	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-135	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	63.2926471533105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTGATTCCTTTTCTT	NA	False	NA	-7	True	AATATA	-18	NA	113600487	113588995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_77370_21	chr9	+	3027	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	8	1242	-4	-1242	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTTCCTAGAGTGAAG	NA	False	NA	14	True	AATAAA	-24	NA	57615845	57657444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
Isoform_77371_9	chr9	+	1424	12	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	95.5400482857649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818265	57837251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57818291_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_77372_27	chr9	+	1311	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	8	0	1	0	multi-exon	FALSE	canonical	3	39	junction_1	82.3315856764583	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818269	57837251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_77373_27	chr9	+	1458	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	17	True	AATATA	-18	NA	57818284	57837252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_77374_62	chr9	+	1338	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	28	-2	6	2	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818296	57837253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_77375_5	chr9	+	2111	11	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	54.7233039938197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818287	57837251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
Isoform_77377_27	chr9	+	3298	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	-1	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.43495258328376	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGTGCCCTGTCT	NA	False	NA	11	True	AATAAA	-16	NA	57847394	57870148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
Isoform_77378_3	chr9	+	1514	2	FSM	ENSMUSG00000097604.2	ENSMUST00000181289.2	2169	2	35	620	35	-620	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTAATTTTTTTATTAT	NA	False	NA	18	True	AATACA	-14	NA	57905358	57914114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57905602_57912843
Isoform_77379_7	chr9	+	2712	18	ISM	ENSMUSG00000032327.15	ENSMUST00000167479.8	2871	19	396	4	251	-4	3prime_fragment	TRUE	canonical	1	1	junction_1	1.92416790985837	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACACTGTCCGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	58042343	58061275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_58042486_58046262_58046330_58046638_58046725_58047696_58047837_58048141_58048166_58048338_58048506_58050197_58050321_58052743_58052812_58052995_58053076_58053280_58053343_58054744_58054908_58056462_58056539_58057360_58057495_58058443_58058562_58058645_58058748_58059161_58059326_58059727_58059884_58060435
Isoform_7738_3	chr11	-	1222	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	71.497109974417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600861	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_77380_5	chr9	+	2069	8	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	44	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	150.498220207796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160518	58169802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_58160561_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77381_11	chr9	+	1787	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	44	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAAGTGCAGCTGG	NA	False	NA	8	True	AATAAA	-19	NA	58160518	58169800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77382_7	chr9	+	1867	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGAGAAGTGCAGCTG	NA	False	NA	7	True	AATAAA	-18	NA	58160437	58169799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77383_21	chr9	+	2191	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	44	1	44	-1	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160518	58169802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77384_130	chr9	+	1911	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	72	1	44	-1	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160518	58169802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77386_14	chr9	+	1969	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	14	1	-6	-1	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGTGCAGCTGGCT	NA	False	NA	10	True	AATAAA	-21	NA	58160460	58169802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77387_3	chr9	+	3481	6	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	4	-5	intron_retention	FALSE	canonical	3	282	junction_1	36.1861852092757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGGAGAAGTGCAGCT	NA	False	NA	6	True	AATAAA	-17	NA	58160478	58169798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77388_3	chr9	+	3382	6	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	106	-2	intron_retention	FALSE	canonical	3	282	junction_1	36.1861852092757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	9	True	AATAAA	-20	NA	58160580	58169801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
Isoform_77389_4	chr9	+	866	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	-28	5	-28	-5	multi-exon	FALSE	canonical	3	39	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAACTGTGGCTGATAC	NA	False	NA	11	True	NA	NA	NA	58362376	58376913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58362640_58374083_58374201_58376427
Isoform_7739_4	chr11	-	1188	7	ISM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	558	2	-1	-2	3prime_fragment	FALSE	canonical	3	130	junction_2	29.1514245887839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGCATTGATTCCTTT	NA	False	NA	-11	True	AATATA	-14	NA	113599794	113588999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629
Isoform_77390_6	chr9	+	1952	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-870	13	-511	-13	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGTGTGCAATGCTA	NA	False	NA	NA	False	AGTAAA	-13	NA	58395374	58397755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58396523_58396951
Isoform_77392_27	chr9	+	2685	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	-509	-37	-509	-1	multi-exon	FALSE	canonical	0	0	junction_2	8.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCGGGGCCCACAGGC	NA	False	NA	NA	False	AATAAA	-16	NA	58395376	58407062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58396523_58396951_58397676_58406247
Isoform_77393_3	chr9	+	2607	5	ISM	ENSMUSG00000032336.18	ENSMUST00000114121.11	863	7	-2	5703	-1	1809	5prime_fragment	FALSE	canonical	3	352	junction_1	32.897568299192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGGAAAAAAAAATACCCC	15	False	NA	NA	False	NA	NA	NA	58489687	58552898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811
Isoform_77394_22	chr9	+	2040	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-17	1	-17	-1	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAATAATACTCTTT	520	False	NA	NA	False	AATAAA	-15	NA	58489557	58560160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
Isoform_774_6	chr10	-	4106	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	286	-3	206	3	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083425	34027385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_7740_19	chr11	-	1478	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	-102	-1	-102	1	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600454	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
Isoform_77400_600	chr9	+	2437	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	48	-1	23	0	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198888	59223483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
Isoform_77401_52	chr9	+	2488	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	-5	1	-5	-1	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198835	59223481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
Isoform_77404_565	chr9	+	2434	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	34	-4	23	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198888	59223483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
Isoform_77406_50	chr9	+	2488	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	-20	-4	-6	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198834	59223483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
Isoform_77408_32	chr9	+	2253	6	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	227.97315631451	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198875	59223483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222013
Isoform_7741_40	chr11	-	1329	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-114	-1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600466	113588998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_77411_46	chr9	+	2272	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	226.796825374607	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198853	59223483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222016
Isoform_77419_915	chr9	+	1828	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	167	1	167	-1	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTGCTTGTG	NA	False	NA	31	True	AATAAA	-23	NA	59446989	59472391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
Isoform_77420_17	chr9	+	1989	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	6	1	6	-1	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTGCTTGTG	NA	False	NA	31	True	AATAAA	-23	NA	59446828	59472391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
Isoform_77421_40	chr9	+	1873	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	120	3	120	-3	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446942	59472389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
Isoform_77430_5	chr9	+	2634	24	FSM	ENSMUSG00000025237.17	ENSMUST00000026267.16	2709	24	58	17	-19	1	multi-exon	FALSE	canonical	3	6	junction_19	14.9962818328102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTGTGGACTGGATAT	NA	False	NA	12	True	AATAAA	-6	NA	59524624	59557551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_77431_4	chr9	+	2774	24	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_19	15.1991194650933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGGATATGATCACTGT	NA	False	NA	21	True	AATAAA	-15	NA	59524526	59557560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_77432_3	chr9	+	2470	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-37	-18	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	15.9016216232161	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAAATGGAA	NA	False	NA	-7	True	NA	NA	NA	59524529	59557532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_59524692_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
Isoform_7744_8	chr11	-	1273	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	55.2692851188707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600843	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_77442_31496	chr9	+	2219	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	210	3	2	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	31496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1874	False	NA	17	True	AATAAA	-17	NA	59563860	59586655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
Isoform_77443_3224	chr9	+	2254	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	175	3	-30	-3	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	3224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1839	False	NA	17	True	AATAAA	-17	NA	59563825	59586655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
Isoform_7746_3	chr11	-	1346	8	FSM	ENSMUSG00000018727.20	ENSMUST00000173655.8	1213	8	-132	-1	-126	1	multi-exon	FALSE	canonical	3	9	junction_4	68.8879599088851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600478	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_7747_5	chr11	-	1322	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-148	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	66.4646940529749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGCATTGATTCCTTT	NA	False	NA	-11	True	AATATA	-14	NA	113600500	113588999	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_77481_4	chr9	+	2758	15	NIC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	67	-42243	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	9.95705062470093	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAAAAATCAACAGTA	622	False	NA	NA	False	NA	NA	NA	59658245	59750404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345
Isoform_77482_3	chr9	+	2022	3	FSM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	150	268	150	-268	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGAAGTCCTTTATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	60620421	60645816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_60620689_60631429_60631641_60644272
Isoform_77483_38	chr9	+	4442	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-25	0	-25	0	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTACTTTTCTGA	NA	False	NA	17	True	AATAAA	-18	NA	60701798	60787641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
Isoform_77484_8	chr9	+	4476	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-62	-1	intron_retention	FALSE	canonical	1	3	junction_12	42.5990856564485	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTTACTTTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	60701761	60787640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770883_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
Isoform_77485_21	chr9	+	4487	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	-68	9	-62	2	multi-exon	FALSE	canonical	3	41	junction_8	35.7857134056402	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTACTTTTCTGAGA	NA	False	NA	19	True	AATAAA	-20	NA	60701761	60787643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
Isoform_77486_5	chr9	+	3313	10	ISM	ENSMUSG00000032280.17	ENSMUST00000162583.8	4299	20	35545	4	-1173	-4	3prime_fragment	FALSE	canonical	3	105	junction_2	44.959515396536	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTGGTTTGATTGTT	NA	False	NA	31	True	AATGAA	-31	NA	61316045	61325764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
Isoform_7749_4	chr11	-	1151	7	NIC	ENSMUSG00000018727.20	novel	1235	7	NA	NA	82	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	75.416620626137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600761	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
Isoform_77494_66	chr9	+	2053	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	49	11	49	-11	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGGGAGATGGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	62248659	62286083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
Isoform_77496_328	chr9	+	1104	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	17	992	17	39	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTTCCCCCCCTCCTT	NA	False	NA	10	True	AATAAA	-21	NA	62248627	62285102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
Isoform_7750_4	chr11	-	1202	6	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-119	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	82.8241510671857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600471	113588996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_113589493_113590661_113590809_113594096_113594193_113597242_113597396_113599629_113599681_113600212
Isoform_77500_78	chr9	+	2118	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	21	3	14	-3	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	10	True	AATAAA	-18	NA	62746087	62759285	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_77502_11	chr9	+	2266	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-129	5	-129	-5	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCATGGGCCGTGGCTGTT	NA	False	NA	8	True	AATAAA	-16	NA	62745937	62759283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
Isoform_77503_11	chr9	+	772	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10571	5	10541	1	3prime_fragment	FALSE	canonical	3	41	junction_1	28	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGGAATTGGTGTT	3022	False	NA	4	True	AATAAA	-16	NA	62775956	62783198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_62776100_62778547_62778737_62782758
Isoform_77504_3	chr9	+	591	3	ISM	ENSMUSG00000032246.15	ENSMUST00000215968.2	526	4	10518	-68	10518	68	3prime_fragment	FALSE	canonical	3	41	junction_1	28	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTGTAATAAGGTCTG	2999	False	NA	NA	False	AATAAA	-20	NA	62775933	62782994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_62776100_62778547_62778737_62782758
Isoform_77506_5	chr9	+	932	2	ISM	ENSMUSG00000032246.15	ENSMUST00000163820.3	699	4	12842	-2	12829	1	3prime_fragment	FALSE	canonical	3	97	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGGAATTGGTGTT	5310	False	NA	4	True	AATAAA	-16	NA	62778244	62783198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_62778737_62782758
Isoform_77509_134	chr9	+	2568	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	30	2696	30	1564	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGCTAATGTGTTTTG	9244	False	NA	NA	False	ATTAAA	-17	NA	63509971	63549174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
Isoform_7751_12	chr11	-	2883	2	FSM	ENSMUSG00000041598.8	ENSMUST00000131488.2	727	2	-25	-2131	-25	0	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	NA	False	NA	-2	True	ATTAAA	-15	NA	113630173	113617677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113620492_113630104
Isoform_77513_139	chr9	+	2570	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	30	1569	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9244	False	NA	NA	False	ATTAAA	-22	NA	63509971	63549179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
Isoform_77522_8616	chr9	+	1390	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	149	-1	-149	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	8616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTGTGTGACTCTTAA	NA	False	NA	36	True	AATAAA	-18	NA	64080655	64085799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
Isoform_77525_320	chr9	+	1543	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-1	-4	-1	4	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTCCACATGGTAG	NA	False	NA	20	True	AATAAA	-17	NA	64080655	64085952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
Isoform_77551_67	chr9	+	697	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	50	481	50	-481	multi-exon	FALSE	canonical	3	413	junction_2	26	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAATTTTGTTTTG	1678	False	NA	-3	True	ATTAAA	-13	NA	64086605	64089933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64086703_64087780_64087871_64089423
Isoform_77553_234	chr9	+	1206	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGATTTGAGTTTC	9570	False	NA	15	True	AATAAA	-15	NA	64188889	64212075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_77555_70	chr9	+	1233	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGATTTGAGTTTC	9543	False	NA	15	True	AATAAA	-15	NA	64188862	64212075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_77563_149	chr9	+	1199	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9570	False	NA	14	True	AATAAA	-14	NA	64188889	64212074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_7757_838	chr11	-	2948	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	60	0	60	0	multi-exon	FALSE	canonical	3	115	junction_1	0	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7423	False	NA	-2	True	ATTAAA	-15	NA	113642647	113617677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_113620492_113642513
Isoform_77570_176	chr9	+	1219	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	0	-8	0	8	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGAGTTTCTCACCAT	9569	False	NA	22	True	AATAAA	-22	NA	64188888	64212082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_77575_111	chr9	+	1205	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	5	631	1	1	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGATTTGAGTTTC	9570	False	NA	15	True	AATAAA	-15	NA	64188889	64212075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
Isoform_7758_12	chr11	-	2948	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	-437	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	6926	False	NA	-2	True	ATTAAA	-15	NA	113643144	113617677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113620492_113643010
Isoform_77583_120	chr9	+	2482	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	12	326	12	-56	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGTGTTTTGATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	64868198	64893934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_77584_55	chr9	+	2531	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-37	326	-37	-56	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGTGTTTTGATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	64868149	64893934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_77586_7	chr9	+	2825	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-6	1	-6	-1	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTAGGATTTTGACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	64868180	64894259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_77587_22	chr9	+	2787	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	-6	56	-6	-56	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGTGTTTTGATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	64868212	64893934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
Isoform_7759_25	chr11	-	2906	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	6968	False	NA	-2	True	ATTAAA	-15	NA	113643102	113617677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113620492_113643010
Isoform_77590_3	chr9	+	1539	6	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	5	36395	5	-10198	5prime_fragment	FALSE	canonical	3	111	junction_4	10.3846039885977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGATTGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	64939700	64953538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901
Isoform_77592_13	chr9	+	4798	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	12	-2	12	2	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTCCCCCATGACTT	NA	False	NA	33	True	ATTAAA	-30	NA	64939707	64989935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
Isoform_77596_4	chr9	+	4419	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26855	-3	26806	3	3prime_fragment	TRUE	canonical	3	6	junction_3	2.94811092476036	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTCTCTCTCTTTTTT	2844	False	NA	7	True	AATAAA	-15	NA	65035622	65045225	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
Isoform_77598_14	chr9	+	3229	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-58	12	-35	-12	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	65048435	65093142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
Isoform_7760_14	chr11	-	3021	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7430	False	NA	-2	True	ATTAAA	-15	NA	113642640	113617677	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_113620492_113642433
Isoform_77600_20	chr9	+	3198	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-27	12	-4	-12	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	65048466	65093142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
Isoform_77601_12	chr9	+	3171	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-4	-21	-4	21	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048466	65093175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
Isoform_77604_8	chr9	+	3213	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-41	-26	-41	26	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	65048429	65093180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
Isoform_77605_14	chr9	+	2501	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-21	2	-21	-2	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAAGTTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	65121950	65146498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
Isoform_77606_15	chr9	+	2583	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	-73	8	-73	-2	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAAGTTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	65122353	65146498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
Isoform_7761_23	chr11	-	1121	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	22	0	22	0	multi-exon	FALSE	canonical	2	2	junction_5	51.0217818409179	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078136	115073657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
Isoform_77611_6	chr9	+	2163	13	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	24	3623	-11	-3623	5prime_fragment	FALSE	canonical	3	317	junction_12	30.2833837827501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGTGACTCATTTT	6175	False	NA	NA	False	GATAAA	-20	NA	65201565	65234316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063
Isoform_77612_373	chr9	+	2468	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	20	397	-15	-397	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6171	False	NA	19	True	AATAAA	-15	NA	65201561	65237542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_77613_13	chr9	+	2868	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	13	4	13	-4	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCAATTTGTTTTTT	6164	False	NA	NA	False	AATAAA	-27	NA	65201554	65237935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_77616_56	chr9	+	2415	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-4	398	-4	-397	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6182	False	NA	19	True	AATAAA	-15	NA	65201572	65237542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
Isoform_7762_91	chr11	-	1156	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	48	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078168	115073657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
Isoform_77620_277	chr9	+	2405	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	14	0	14	0	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCCCCTGATTTATT	NA	False	NA	42	True	AATAAA	-25	NA	65253399	65266925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
Isoform_77626_386	chr9	+	1140	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-143	-151	-143	151	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCAGGTGTAGTGAC	NA	False	NA	15	True	NA	NA	NA	65278984	65285482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_77627_66	chr9	+	3136	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-140	-2150	-140	-178	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCTTAAAAATAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	65278987	65287481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_77630_99	chr9	+	1172	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-172	-154	-172	154	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGGTGTAGTGACACA	NA	False	NA	18	True	NA	NA	NA	65278955	65285485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
Isoform_77638_6	chr9	+	946	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-13	11692	-7	-6552	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGAGATCAAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	65343056	65348007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
Isoform_77639_3	chr9	+	1169	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-4	11460	2	-6320	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATAGGTGATCTTCA	NA	False	NA	NA	False	AATAAA	-9	NA	65343065	65348239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
Isoform_7764_75	chr11	-	1889	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	59	0	59	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115167817	115158849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
Isoform_77640_92	chr9	+	1401	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	641	0	-4	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGAGCTTGTATCCTTT	NA	False	NA	23	True	AATAAA	-24	NA	65343063	65359695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
Isoform_77641_86	chr9	+	2031	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	11	0	-11	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAACAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	65343063	65360325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
Isoform_77644_194	chr9	+	1651	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	15	1014	9	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7191	False	NA	11	True	AATAAA	-13	NA	65368243	65394738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
Isoform_77648_3	chr9	+	3348	13	FSM	ENSMUSG00000041064.15	ENSMUST00000134538.9	3395	13	45	2	0	0	multi-exon	FALSE	canonical	2	4	junction_1	37.6787406902088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494486	65503244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65494534_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77649_14	chr9	+	3397	13	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	35.6872020322256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494486	65503246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65494581_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77650_14	chr9	+	3369	13	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.8817502360183	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494486	65503246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77651_3	chr9	+	3721	12	FSM	ENSMUSG00000041064.15	ENSMUST00000154970.9	3725	12	6	-2	6	0	multi-exon	FALSE	canonical	3	7	junction_6	37.3420641109475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494480	65503246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77652_31	chr9	+	3712	12	FSM	ENSMUSG00000041064.15	ENSMUST00000239405.2	3680	12	-30	-2	-7	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494456	65503246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77653_47	chr9	+	3682	12	FSM	ENSMUSG00000041064.15	ENSMUST00000239405.2	3680	12	0	-2	0	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494486	65503246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77654_4	chr9	+	2700	11	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	1575	4	1570	1	3prime_fragment	FALSE	canonical	3	64	junction_5	27.7805687486776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGTGCCTCCTGCCTG	NA	False	NA	23	True	AATAAA	-13	NA	65496077	65503245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
Isoform_77655_27	chr9	+	1921	9	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	514.959813359256	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGCTTCTACGATC	NA	False	NA	21	True	AATAAA	-21	NA	65536930	65567815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
Isoform_77656_1170	chr9	+	1980	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	7	0	7	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537847	65567808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
Isoform_77657_62	chr9	+	2018	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	-31	0	-31	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537809	65567808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
Isoform_7766_3	chr11	-	1846	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-167	3272	-18	-3272	multi-exon	FALSE	canonical	2	4	junction_5	1.6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGCTTTGTTCCATG	262	False	NA	NA	False	NA	NA	NA	115188507	115173719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
Isoform_77663_15	chr9	+	2448	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1453	junction_4	118.273341600436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTGATTTTTGCTT	NA	False	NA	13	True	AATAAA	-13	NA	65537841	65567807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65566416_65566487_65566719
Isoform_77666_16	chr9	+	1499	3	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	814.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537839	65567808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65538180_65566416_65566487_65566719
Isoform_77670_72	chr9	+	1810	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGGTCTGTCTTTTTA	4635	False	NA	20	True	AATAAA	-14	NA	65583860	65597579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
Isoform_77672_50	chr9	+	964	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	79	1145	-4	-1145	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAATCTCTTGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	65797597	65809403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
Isoform_77674_63	chr9	+	916	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	127	1145	2	-1145	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAATCTCTTGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	65797645	65809403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
Isoform_7768_9	chr11	-	3273	19	FSM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	-39	2	-2	-2	multi-exon	FALSE	canonical	2	4	junction_16	3.67045259092421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTTGTGTCTCTGTAC	8658	False	NA	-2	True	AATAAA	-13	NA	115258584	115238534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250635_115251147_115251319_115252464_115252615_115258369
Isoform_77680_1248	chr9	+	895	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-6	3	3	-3	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1568	False	NA	13	True	AATAAA	-13	NA	65967506	65973902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
Isoform_77681_92	chr9	+	987	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-98	3	-89	-3	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1476	False	NA	13	True	AATAAA	-13	NA	65967414	65973902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
Isoform_77686_353	chr9	+	1089	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	150	1	150	-1	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCTCACCTTAGGTTT	1533	False	NA	16	True	AATAAA	-17	NA	66034042	66046236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
Isoform_77687_85	chr9	+	1180	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	59	1	59	-1	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCTCACCTTAGGTTT	1442	False	NA	16	True	AATAAA	-17	NA	66033951	66046236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
Isoform_77688_277	chr9	+	1142	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	107	-9	107	9	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGGTTTTTACTGAATT	1490	False	NA	26	True	AATAAA	-27	NA	66033999	66046246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
Isoform_7769_3	chr11	-	3198	19	FSM	ENSMUSG00000034586.15	ENSMUST00000106542.9	3276	19	76	2	-13	-2	multi-exon	FALSE	canonical	1	2	junction_16	3.88928569404159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTTGTGTCTCTGTAC	8736	False	NA	-2	True	AATAAA	-13	NA	115258506	115238534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250638_115251147_115251319_115252464_115252615_115258369
Isoform_77690_9	chr9	+	1041	4	NIC	ENSMUSG00000032381.6	novel	1240	5	NA	NA	150	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	323.837750870538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCACCTTAGGTTTTT	1533	False	NA	18	True	AATAAA	-19	NA	66034042	66046238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_66034253_66039808_66039974_66043583_66043630_66045618
Isoform_77692_6	chr9	+	1780	12	FSM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	-11	3	-11	-3	multi-exon	TRUE	canonical	0	0	junction_2	2.90340353139478	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTGGGTGTTTTAGA	4123	False	NA	NA	False	ATTAAA	-14	NA	66065493	66179521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66065623_66072619_66072718_66127815_66128038_66138994_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752_66161906_66162612_66162659_66175960_66176051_66176148_66176233_66178908
Isoform_77693_4	chr9	+	3639	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGATTTTTTCCCCC	NA	False	NA	NA	False	AATAAA	-14	NA	66621011	66674124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
Isoform_77695_38	chr9	+	564	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	10	1	10	1	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTCCTCCCTCTGCTTC	NA	False	NA	31	True	AATAAA	-15	NA	66853382	66856795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
Isoform_77697_2500	chr9	+	470	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	32	-3	27	1	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTCCCTCTGCTTCTC	NA	False	NA	33	True	AATAAA	-17	NA	66853399	66856797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
Isoform_77701_16	chr9	+	4080	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	41	48	10	-48	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4693	False	NA	21	True	AATAAA	-15	NA	69305228	69340356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
Isoform_77703_73	chr9	+	1363	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	76	8	-20	-8	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGAATGCCGTTGCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	69360977	69399069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
Isoform_77704_5	chr9	+	2410	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	15	39	15	23	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCATTCTAAAACAATGA	NA	False	NA	40	True	AATAAA	-40	NA	69896762	69915560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
Isoform_77706_80	chr9	+	2352	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-23	-1	15	1	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTCTTAATTACCTT	NA	False	NA	18	True	AATAAA	-18	NA	69896762	69915538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
Isoform_77711_10	chr9	+	917	6	NIC	ENSMUSG00000033543.18	novel	833	7	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	366.992098007573	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTTGTGAGTAATAC	NA	False	NA	12	True	AATAAA	-10	NA	69919843	69930014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69926670_69926798_69929718
Isoform_77713_13	chr9	+	883	6	FSM	ENSMUSG00000033543.18	ENSMUST00000116552.8	888	6	5	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	405.059798054559	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919852	69930020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69925961_69926101_69926670_69926798_69929718
Isoform_77714_377	chr9	+	744	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	15	134	0	-5	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTTGTGAGTAATAC	NA	False	NA	12	True	AATAAA	-10	NA	69919846	69930014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
Isoform_77715_6	chr9	+	862	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	12	19	-3	-19	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGATTGTAATTTTATCTA	NA	False	NA	NA	False	AATAAA	-15	NA	69919843	69930129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
Isoform_77716_13	chr9	+	1011	5	NIC	ENSMUSG00000033543.18	novel	791	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAGTAATACTTGAT	NA	False	NA	17	True	AATAAA	-15	NA	69919852	69930019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
Isoform_77717_3	chr9	+	4308	17	ISM	ENSMUSG00000032220.11	ENSMUST00000214767.2	2671	18	0	4281	0	-4281	5prime_fragment	FALSE	canonical	3	179	junction_9	19.4171919635667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTACACAAAATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	70114631	70262800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541
Isoform_77718_100	chr9	+	4642	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-18	1	0	-1	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGTTTCTTCATGAC	NA	False	NA	19	True	AATAAA	-19	NA	70114631	70307047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
Isoform_77723_8	chr9	+	1666	12	ISM	ENSMUSG00000032212.11	ENSMUST00000217593.2	3319	20	-96	11836	-10	-15	5prime_fragment	FALSE	canonical	3	132	junction_6	36.3799963198377	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAGCAAAGA	NA	False	NA	NA	False	ATTAAA	-31	NA	70450065	70487497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448
Isoform_77724_4	chr9	+	1648	12	ISM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	-4	12017	-4	-13	5prime_fragment	FALSE	canonical	3	66	junction_6	52.1523515154882	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGCAAAGATA	NA	False	NA	NA	False	ATTAAA	-33	NA	70450031	70487499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448
Isoform_77726_112	chr9	+	4656	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-69	6	-69	-6	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAACTTGAGGTCTATGC	4881	False	NA	8	True	AATAAA	-13	NA	70586209	70687505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
Isoform_77729_3	chr9	+	4466	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-32	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	71.582583960979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAACTTGAGGTCTAT	4918	False	NA	6	True	AATAAA	-11	NA	70586246	70687503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_70586542_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
Isoform_77730_6	chr9	+	2232	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	30	2	30	-2	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGACTGTTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	71123100	71203523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
Isoform_77731_3	chr9	+	4091	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	18	278	-9	1	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	72182178	72270781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
Isoform_77732_6	chr9	+	831	5	ISM	ENSMUSG00000032221.15	ENSMUST00000183809.8	854	6	522	-30	-2	30	3prime_fragment	FALSE	canonical	3	40	junction_2	3.35410196624968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCCACCCGGAGACAAA	NA	False	NA	NA	False	NA	NA	NA	72345814	72356041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810
Isoform_77733_4	chr9	+	1815	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	-9	3444	0	-3444	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGTCATTTTTATTTA	NA	False	NA	10	True	ATTAAA	-22	NA	72345807	72365863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
Isoform_77734_24	chr9	+	865	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	3452	13826	-3452	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCAGAATTAGTCATT	1866	False	NA	2	True	ATTAAA	-14	NA	72359642	72365855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_72360121_72364059_72364186_72365594
Isoform_77735_3	chr9	+	1771	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-387	73	-18	-73	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTAAAATTATGTGC	659	False	NA	-64	True	NA	NA	NA	72439503	72519632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_77736_3	chr9	+	1844	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-387	0	-18	0	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGATTACCTGGTTTT	659	False	NA	9	True	AATAAA	-18	NA	72439503	72519705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
Isoform_7774_697	chr11	-	588	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	35	2	-10	-2	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310753	115306516	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
Isoform_77745_42	chr9	+	5400	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	90	9	-2	-9	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGCTGTGGCTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	72569717	72657125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
Isoform_77754_3	chr9	-	263	3	Antisense	novelGene_ENSMUSG00000032216.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCATCCAAACAGCCTGA	8799	False	NA	NA	False	NA	NA	NA	72654516	72650837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_72650917_72653686_72653759_72654404
Isoform_77756_63	chr9	+	2933	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	0	6	0	1	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGAGACTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	72892859	72921214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_77757_6	chr9	+	2488	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-39	490	35	-483	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTCCATGTCAAACA	NA	False	NA	NA	False	TATAAA	-21	NA	72892820	72920730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_77758_4	chr9	+	5020	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-29	-2052	-29	-10	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTAAAGGTCTCTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	72892830	72923272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
Isoform_77760_4	chr9	+	2693	9	FSM	ENSMUSG00000034563.17	ENSMUST00000037977.15	3151	9	107	351	32	-11	multi-exon	FALSE	canonical	1	1	junction_8	60.1040764008565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTAAAGGTCTCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	72892817	72923271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920275_72922613
Isoform_77762_16	chr9	+	3010	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	-49	8	-22	-8	multi-exon	FALSE	canonical	3	41	junction_8	47.1963981676568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAAGGTCTCTCTCAA	NA	False	NA	NA	False	AATAAA	-15	NA	72892837	72923274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
Isoform_77763_84	chr9	+	487	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	13	-4	1	4	multi-exon	FALSE	canonical	3	439	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTTATAAAGGTAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	72947012	72950065	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72947148_72949713
Isoform_77765_64	chr9	+	1602	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	65	14	-47	-14	multi-exon	FALSE	canonical	3	216	junction_2	18.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTGCATTCCCC	NA	False	NA	12	True	TTTAAA	-12	NA	73009744	73011706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73009958_73010111_73010292_73010497
Isoform_7777_62	chr11	-	800	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	38	20	-9	-20	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACCAAACGCGA	NA	False	NA	-28	True	AATACA	-28	NA	115382650	115381265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
Isoform_77770_14	chr9	+	1154	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	60	14	-52	-14	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTGCATTCCCC	NA	False	NA	12	True	TTTAAA	-12	NA	73009739	73011706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
Isoform_77771_5	chr9	+	3138	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	5	-1600	5	1600	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTTGCATT	8585	False	NA	NA	False	CATAAA	-13	NA	73020734	73032215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_77772_214	chr9	+	1521	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	22	0	22	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8602	False	NA	13	True	AATAAA	-18	NA	73020751	73030615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_77778_14	chr9	+	1483	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	-28	88	-6	-88	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAACTCTTGCTTTTG	8552	False	NA	39	True	AAAAAG	-8	NA	73020701	73030527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_7778_6	chr11	-	1078	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	27	-198	-9	-20	multi-exon	FALSE	canonical	3	183	junction_2	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACCAAACGCGA	NA	False	NA	-28	True	AATACA	-28	NA	115382650	115381265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115382025_115382096_115382198_115382432
Isoform_77780_5	chr9	+	3120	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	23	-1600	23	1600	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTTGCATT	8603	False	NA	NA	False	CATAAA	-13	NA	73020752	73032215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
Isoform_77781_18	chr9	+	595	2	FSM	ENSMUSG00000007656.14	ENSMUST00000169448.2	610	2	16	-1	14	1	multi-exon	FALSE	canonical	3	3551	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74944974	74945756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945002_74945188
Isoform_77783_13	chr9	+	3904	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	55	4	-8	-4	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGCAGTTTTGTCTT	NA	False	NA	16	True	AATAAA	-26	NA	74944950	74967591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_77784_13	chr9	+	3881	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	79	3	14	-3	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGCAGTTTTGTCTTA	NA	False	NA	17	True	AATAAA	-27	NA	74944974	74967592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_77785_14	chr9	+	1671	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	55	2218	-8	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTTTTTGTTATGCTGA	NA	False	NA	4	True	AATAAA	-13	NA	74944950	74965358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_77786_348	chr9	+	397	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	76	3471	11	1	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944971	74964105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
Isoform_7779_203	chr11	-	1370	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	4	1	4	-1	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCGTGTTTTGTCTTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	115405209	115388179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
Isoform_77792_33	chr9	+	401	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	13	15	11	1	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944971	74964105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
Isoform_77797_75	chr9	+	552	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	4	3490	4	1	multi-exon	FALSE	canonical	3	5814	junction_2	96	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74945003	74964105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_74945244_74959514_74959638_74963916
Isoform_778_3	chr10	-	4185	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	209	-5	129	5	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCTCTGGTGTGCTT	NA	False	NA	-5	True	AATAAA	-19	NA	34083502	34027383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
Isoform_7780_535	chr11	-	696	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	3	676	3	3	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGCTGTCTTTCCCTGCT	NA	False	NA	-9	True	ATTAAA	-17	NA	115405210	115388854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
Isoform_77805_6	chr9	+	3107	22	ISM	ENSMUSG00000034593.17	ENSMUST00000155282.9	6372	41	152	44404	-27	-2411	5prime_fragment	FALSE	canonical	3	40	junction_18	9.91139887525465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAGTCTATTGAAGA	2683	False	NA	NA	False	AAGAAA	-39	NA	74978819	75081428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233
Isoform_77806_5	chr9	+	1612	10	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	37	47020	5	65	5prime_fragment	FALSE	canonical	3	35	junction_4	9.15302014516399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCTTAGCCAGCAAAA	5165	False	NA	NA	False	AATAAA	-20	NA	75139338	75165713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
Isoform_77807_5	chr9	+	2771	12	FSM	ENSMUSG00000033590.9	ENSMUST00000215620.2	3189	12	23	395	23	-1	multi-exon	FALSE	canonical	3	30	junction_2	7.22140985754018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CACGAAAAAAAAAAAAAAAA	1740	False	NA	NA	False	TTTAAA	-9	NA	75195135	75212338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
Isoform_77808_9	chr9	+	2108	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	3	-6	-2	1	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTATCTTGTCTTTATT	378	False	NA	7	True	NA	NA	NA	75221420	75253159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
Isoform_77812_47	chr9	+	2178	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	1	1	1	-1	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTATGCTTAAGAAAA	927	False	NA	4	True	AATAAA	-13	NA	75348818	75373713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
Isoform_77813_73	chr9	+	2155	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	24	1	24	-1	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTATGCTTAAGAAAA	950	False	NA	4	True	AATAAA	-13	NA	75348841	75373713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
Isoform_77816_18	chr9	+	2463	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-48	-1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTTATGTGTGTGCAT	NA	False	NA	15	True	AATAAA	-20	NA	75375849	75393962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
Isoform_77818_5	chr9	+	2445	4	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	14.9740516301441	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTTATGTGTGTGCAT	NA	False	NA	15	True	AATAAA	-20	NA	75375871	75393962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_75375966_75388729_75388947_75390380_75390484_75391931
Isoform_77819_17	chr9	+	1202	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-11	-2	-11	2	multi-exon	FALSE	canonical	3	61	junction_2	3	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCATTTCTCTTATTTA	NA	False	NA	9	True	AATAAA	-19	NA	75533011	75545055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_75533320_75542667_75543000_75544493
Isoform_77821_91	chr9	+	3421	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	0	2	0	-2	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGTACGTGTATGAGT	4420	False	NA	16	True	AATAAA	-43	NA	77661816	77701765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
Isoform_77824_516	chr9	+	2762	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	17	3	17	-3	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824662	77891798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
Isoform_77829_11	chr9	+	3055	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	-514	-1	-514	1	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78015959	78075221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_7783_21	chr11	-	849	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-13	-140	3	140	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAACAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	115405210	115391067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
Isoform_77831_203	chr9	+	2419	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-27	4168	4	1	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78020569	78075221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_77832_46	chr9	+	2448	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-56	4168	18	1	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78020540	78075221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_77833_10	chr9	+	2523	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-27	4064	4	105	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGTTCATTGTTC	NA	False	NA	NA	False	AATGAA	-17	NA	78020569	78075325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_77834_7	chr9	+	2491	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-99	4168	-25	1	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTCTCATTATTTT	NA	False	NA	4	True	TATAAA	-15	NA	78020497	78075221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_77836_4	chr9	+	2268	13	NIC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	30.9931668096193	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCGGGTCTCATTATT	NA	False	NA	2	True	TATAAA	-13	NA	78020585	78075219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
Isoform_77837_5	chr9	+	1412	4	FSM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	34	-2	34	2	multi-exon	FALSE	canonical	3	12	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083229	78086163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78083318_78083852_78084025_78084280_78084376_78085106
Isoform_77838_3	chr9	+	1409	4	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	33	2	intron_retention	FALSE	canonical	1	3	junction_1	4.49691252107735	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083228	78086163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_78083318_78083856_78084025_78084280_78084376_78085106
Isoform_77840_1746	chr9	+	902	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	69	6	69	-6	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	1746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCTCGTTGGAGAG	NA	False	NA	11	True	ATTAAA	-10	NA	78099297	78116625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
Isoform_77847_3	chr9	+	1092	4	ISM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	32	20647	32	-20647	5prime_fragment	FALSE	canonical	3	88	junction_3	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAGAGTTGTTTTTTT	9074	False	NA	NA	False	NA	NA	NA	78303090	78310222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631
Isoform_77848_4	chr9	+	599	4	ISM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	31	21141	31	-21141	5prime_fragment	FALSE	canonical	3	88	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTTTGAAATGGGAAA	9073	False	NA	NA	False	NA	NA	NA	78303089	78309728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631
Isoform_77850_3	chr9	+	2208	17	FSM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	-3	2	-3	-2	multi-exon	FALSE	canonical	3	26	junction_4	22.7904002542737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTGTTGAAATTTTT	9039	False	NA	0	True	AATAAA	-11	NA	78303055	78330867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
Isoform_77851_179	chr9	+	2357	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	3	6	-2	-6	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTGTTGTTAGGTGAT	NA	False	NA	13	True	AATAAA	-12	NA	78355492	78381428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
Isoform_77852_7	chr9	+	2367	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	21.4734123514762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTGTTGTTAGGTGAT	NA	False	NA	13	True	AATAAA	-12	NA	78355493	78381428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
Isoform_77857_4	chr9	+	3766	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-472	201	48	-4	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAATGAAAACAAAAAGAG	NA	False	NA	NA	False	ACTAAA	-43	NA	79974302	80050987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_77858_4	chr9	+	3872	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-578	201	12	-4	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAATGAAAACAAAAAGAG	NA	False	NA	NA	False	ACTAAA	-43	NA	79974196	80050987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
Isoform_7786_575	chr11	-	992	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	53	6	6	-6	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCTGTTCTCTTTAT	NA	False	NA	-57	True	AATAAA	-12	NA	115427049	115413933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
Isoform_77866_5	chr9	+	5547	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-32	798	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGATTGGTGTCTTTAT	4822	False	NA	26	True	AATAAA	-29	NA	80072280	80216682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
Isoform_77867_10	chr9	+	692	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	-60	6	-60	-6	multi-exon	FALSE	canonical	3	2455	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81559590	81560724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_81559913_81560354
Isoform_77868_9	chr9	+	2088	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	13	569	13	-1	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTACTGGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	81745735	81908510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
Isoform_77870_4	chr9	+	1681	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	477	0	211	0	multi-exon	FALSE	canonical	3	114	junction_3	13.589211407093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGATGTTGATCTCTG	NA	False	NA	4	True	NA	NA	NA	82712069	82729740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_77871_22	chr9	+	1085	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	459	614	193	53	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATACTGAATTTTTACT	NA	False	NA	NA	False	AATAAA	-17	NA	82712051	82729126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
Isoform_77874_4	chr9	+	1034	3	FSM	ENSMUSG00000032251.13	ENSMUST00000034783.6	1159	3	203	-78	203	78	multi-exon	FALSE	canonical	1	5	junction_1	54.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGTTGTCATGTCTTG	NA	False	NA	NA	False	AATAAA	-42	NA	82712061	82729151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_82712393_82728351_82728483_82728579
Isoform_77875_19	chr9	+	4569	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-6	2	-5	-2	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTTTTATTTTTCCT	NA	False	NA	7	True	AATAAA	-14	NA	83430374	83483397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_77876_40	chr9	+	3508	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	1056	0	-1056	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGAGTTGTTTCTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	83430381	83482343	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_77877_4	chr9	+	2204	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-47	2408	-46	1414	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTGTGTGTTGTGTTG	NA	False	NA	NA	False	GATAAA	-17	NA	83430333	83480991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
Isoform_77878_3	chr9	+	272	2	FSM	ENSMUSG00000038379.16	ENSMUST00000189727.2	1791	2	-52	1571	-7	-1571	multi-exon	FALSE	canonical	3	232	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	83716734	83718017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83716813_83717823
Isoform_77880_10	chr9	+	2685	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	28	-2	-1	2	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTCGACAACATTCT	NA	False	NA	2	True	AATAAA	-17	NA	83716769	83751548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
Isoform_77881_129	chr9	+	2871	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-3	3	-3	-3	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTACAGTGGTCAGTT	NA	False	NA	7	True	AATAAA	-18	NA	83716767	83754436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
Isoform_77884_17	chr9	+	2895	22	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	54.6264162422717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACAGTGGTCAGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	83716748	83754438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735136_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
Isoform_77887_6	chr9	+	3023	3	ISM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	1	167796	1	-167755	5prime_fragment	FALSE	canonical	3	668	junction_1	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83807198	83838496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_83807413_83834576_83834655_83835765
Isoform_77888_423	chr9	+	1483	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-5	-1	-5	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	83807192	84006293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
Isoform_7789_60	chr11	-	1039	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	6	6	6	-6	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCTGTTCTCTTTAT	NA	False	NA	-57	True	AATAAA	-12	NA	115427096	115413933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
Isoform_77890_261	chr9	+	2419	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	7	1055	7	-1055	multi-exon	FALSE	canonical	3	125	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85724924	85728038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_85725009_85725703
Isoform_77891_7	chr9	+	3479	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	15	-13	15	13	multi-exon	FALSE	canonical	3	125	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTCTTTGCAGATGAC	NA	False	NA	NA	False	AATAAA	-43	NA	85724932	85729106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_85725009_85725703
Isoform_77893_21	chr9	+	2475	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	-6	-2060	-6	-1055	multi-exon	FALSE	canonical	3	15	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85725407	85728038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_85725548_85725703
Isoform_77894_21	chr9	+	1213	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	5	-164	5	-2	multi-exon	FALSE	canonical	3	38	junction_1	7	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAACTTGTCTCAAGTCC	NA	False	NA	4	True	AATAAA	-17	NA	86454048	86456950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86454111_86454889_86455117_86456026
Isoform_77895_13	chr9	+	3424	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	20	0	-20	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAAAGAATAAAAAGTA	NA	False	NA	-16	True	NA	NA	NA	86625701	86640476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86625860_86637210
Isoform_77897_13	chr9	+	2530	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	914	0	-743	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	86625701	86639582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86625860_86637210
Isoform_779_9	chr10	-	2678	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	47	2	-11	-2	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	NA	False	NA	-3	True	AATAAA	-15	NA	34294488	34179606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_77901_203	chr9	+	2195	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	56	393	-17	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904122	86959434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77902_47	chr9	+	2106	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	33	505	33	-112	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGATGGTGTATGTCCT	NA	False	NA	NA	False	ATTAAA	-25	NA	86904099	86959322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77903_8	chr9	+	2264	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	44	336	-29	57	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTTACATACTGTTT	NA	False	NA	68	True	AATACA	-19	NA	86904110	86959491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77905_4	chr9	+	2604	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	37	3	-36	-3	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTGGGACTAGGTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	86904103	86959824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77906_4	chr9	+	2039	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904113	86959434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
Isoform_77907_5	chr9	+	2063	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	34	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_11	187.642422099664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGTGGTGGACGTGT	NA	False	NA	10	True	AATAAA	-21	NA	86904100	86959433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77908_4	chr9	+	2044	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-17	5	combination_of_known_splicesites	FALSE	canonical	3	62	junction_8	234.467696264786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGACGTGTGGCTGA	NA	False	NA	16	True	AATAAA	-27	NA	86904122	86959439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
Isoform_77909_30	chr9	+	771	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	25	20	25	-6	multi-exon	TRUE	canonical	3	175	junction_1	109	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093234	89122273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_89093365_89097261_89097524_89121894
Isoform_7791_3	chr16	-	549	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	-86	-177	-86	177	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATAGTGCTCTCTCTT	NA	False	NA	NA	False	CATAAA	-19	NA	19995848	19995299	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr16_-_19995300_19995800
Isoform_77910_19	chr9	+	701	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093474	89122273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_89093535_89097261_89097524_89121894
Isoform_77911_182	chr9	+	1489	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	513	300	-79	1	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTGATGTTACTTTA	NA	False	NA	NA	False	NA	NA	NA	92132315	92154031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_77912_3	chr9	+	2148	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	443	-289	-149	289	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGCTTCAGTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	92132245	92154620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_77913_61	chr9	+	1568	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	432	302	-160	1	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAGTTGATGTTACTT	NA	False	NA	NA	False	NA	NA	NA	92132234	92154029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_77915_3	chr9	+	1812	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	490	0	-102	0	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTTTGGCTCCTGTATT	NA	False	NA	NA	False	TATAAA	-23	NA	92132292	92154331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_77916_3	chr9	+	1488	9	FSM	ENSMUSG00000032369.14	ENSMUST00000186364.2	1471	9	-16	-1	-16	1	multi-exon	FALSE	canonical	1	9	junction_1	116.228223766863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAGTTGATGTTACTT	NA	False	NA	NA	False	NA	NA	NA	92132378	92154029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92132478_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
Isoform_77919_6	chr9	+	3598	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	41	10	0	-2	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAACATTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	92424316	92490471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
Isoform_77922_15	chr9	+	1962	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	-73	2549	-73	864	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGGCAGCCAGATAAC	8302	False	NA	NA	False	AATAAA	-14	NA	95519580	95577600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_77923_212	chr9	+	1752	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	138	2548	138	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8513	False	NA	NA	False	AATAAA	-15	NA	95519791	95577601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_77924_7	chr9	+	2073	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	-183	2548	-183	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8192	False	NA	NA	False	AATAAA	-15	NA	95519470	95577601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_77925_19	chr9	+	1835	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	54	2549	54	864	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGGCAGCCAGATAAC	8429	False	NA	NA	False	AATAAA	-14	NA	95519707	95577600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_77929_22	chr9	+	1781	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	111	2546	111	867	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8486	False	NA	NA	False	AATAAA	-17	NA	95519764	95577603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
Isoform_77934_8	chr9	+	2463	20	ISM	ENSMUSG00000032410.14	ENSMUST00000189612.7	3357	21	-87	2047	-15	-2047	5prime_fragment	FALSE	canonical	3	38	junction_14	7.6632735676637	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCATGAGGACGTG	NA	False	NA	NA	False	GATAAA	-45	NA	95836797	95880400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268
Isoform_77937_3	chr9	+	2747	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	1	67	1	-67	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTCCTGGCTCT	NA	False	NA	NA	False	TATAAA	-18	NA	96001415	96062176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
Isoform_77938_4	chr9	+	2761	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	113.611608707632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078350	96201030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_7794_7	chr11	-	3590	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
Isoform_77940_5	chr9	+	2890	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-64	-1113	-2	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078325	96201137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77941_9	chr9	+	1809	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-65	-31	-3	31	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCATATGTGTCTTTAG	NA	False	NA	25	True	AATAAA	-31	NA	96078324	96200055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77944_3	chr9	+	1733	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	24	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	114.876352609616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGCTCATATGTG	NA	False	NA	18	True	AATAAA	-24	NA	96078348	96200048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77945_8	chr9	+	1756	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	29	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTCATATGTGTCTTT	NA	False	NA	23	True	AATAAA	-29	NA	96078327	96200053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77946_7	chr9	+	2715	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078345	96201030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77947_3	chr9	+	1720	13	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-9	29	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	132.410635482535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTCATATGTGTCTTT	NA	False	NA	23	True	AATAAA	-29	NA	96078347	96200053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77948_3	chr9	+	1740	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	-29	5643	0	32	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATATGTGTCTTTAGT	NA	False	NA	26	True	AATAAA	-32	NA	96078327	96200056	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_7795_117	chr11	-	3645	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	171	0	0	0	multi-exon	TRUE	canonical	3	352	junction_6	42.6075385788712	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3552	False	NA	-2	True	AATAAA	-15	NA	115494706	115475080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
Isoform_77950_5	chr9	+	2641	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACTCAATATTCAGTG	NA	False	NA	0	True	NA	NA	NA	96078352	96201030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77951_3	chr9	+	1661	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-6	14	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTTAATATTTGATG	NA	False	NA	8	True	AATAAA	-14	NA	96078350	96200038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77952_4	chr9	+	1654	12	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-5	27	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.720956553214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCTCATATGTGTCT	NA	False	NA	21	True	AATAAA	-27	NA	96078322	96200051	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77953_5	chr9	+	1863	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	140.903655027114	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGCTCATATGTG	NA	False	NA	18	True	AATAAA	-24	NA	96078327	96200048	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77954_3	chr9	+	2962	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	133.535613227333	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078314	96201137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77955_4	chr9	+	2693	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	3	-18	at_least_one_novel_splicesite	FALSE	non_canonical	1	34	junction_3	133.535613227333	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTTATTTCAA	NA	False	NA	NA	False	AATGAA	-12	NA	96078359	96200913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_96078614_96084183_96084242_96093185_96093221_96093243_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
Isoform_77957_64	chr9	+	716	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1910	26	1910	-26	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTGTTTTGGAGGA	4795	False	NA	15	True	AATAAA	-16	NA	98306923	98328602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
Isoform_77958_17	chr9	+	815	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1811	26	1811	-26	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTGTTTTGGAGGA	4696	False	NA	15	True	AATAAA	-16	NA	98306824	98328602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
Isoform_77963_758	chr9	+	3048	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-3	5	-3	-5	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445780	98470430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
Isoform_77973_52	chr9	+	988	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	31	0	3	0	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3575	False	NA	9	True	AATAAA	-23	NA	98868456	98884074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
Isoform_77977_10	chr9	+	2643	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	4	-3	combination_of_known_junctions	TRUE	canonical	3	66	junction_1	83.1088001619555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125498	99182454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_77978_5	chr9	+	2462	5	ISM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-15	0	4	0	intron_retention	FALSE	canonical	3	228	junction_1	61.0384100382702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTTGGTCATCAT	NA	False	NA	7	True	NA	NA	NA	99125498	99146981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878
Isoform_77979_14	chr9	+	1779	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-10	-1	-2	1	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCTTGGTCATCATG	NA	False	NA	8	True	NA	NA	NA	99125503	99146982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
Isoform_7798_19	chr11	-	3563	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	146	107	-12	2	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTCACTACTACTGAG	3527	False	NA	-11	True	ATTAAA	-16	NA	115494731	115475187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
Isoform_77981_10	chr9	+	1140	11	ISM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	-30	16893	-9	3042	5prime_fragment	TRUE	canonical	3	165	junction_10	84.8365487275384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATAAAGTAATTATAT	NA	False	NA	NA	False	TATAAA	-35	NA	99125485	99163145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080
Isoform_77982_33	chr9	+	2585	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	19	2	0	-2	multi-exon	FALSE	canonical	3	165	junction_10	72.0150887688172	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAAGTGTCCCTAGTGA	NA	False	NA	16	True	AATAAA	-21	NA	99125513	99182455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
Isoform_77984_68	chr9	+	2194	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	19	48	-10	-48	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGTAATTATTCAATG	6425	False	NA	1	True	ATTAAA	-12	NA	99457870	99466506	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_77986_6	chr9	+	2262	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	18	-19	-11	19	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGCTCAATCGATGGTA	6424	False	NA	68	True	TATAAA	-20	NA	99457869	99466573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
Isoform_77989_4	chr9	+	1036	8	NIC	ENSMUSG00000037286.16	novel	536	4	NA	NA	177	64	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	120.197965957865	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTGTGGTAATCTG	NA	False	NA	NA	False	AATGAA	-34	NA	100480027	100678908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756
Isoform_7799_5	chr11	-	1382	7	FSM	ENSMUSG00000020743.16	ENSMUST00000146244.8	869	7	-21	-492	0	-7	multi-exon	FALSE	canonical	1	4	junction_4	162.572035315631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503746	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115501242_115501309_115502728_115502861_115503610
Isoform_77990_3	chr9	+	925	8	ISM	ENSMUSG00000037286.16	ENSMUST00000138405.8	2637	13	157	70438	3	64	5prime_fragment	FALSE	canonical	3	359	junction_3	30.7650742875483	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTGTGGTAATCTG	NA	False	NA	NA	False	AATGAA	-34	NA	100525825	100678908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756
Isoform_77991_3	chr9	+	2462	11	FSM	ENSMUSG00000035606.9	ENSMUST00000039390.6	5837	11	201	3174	201	-3174	multi-exon	TRUE	canonical	0	0	junction_1	0.640312423743285	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGCCTGCTCTTGTG	NA	False	NA	NA	False	AAAAAG	-40	NA	102383149	102420264	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102383478_102386309_102386373_102390171_102390235_102398487_102398563_102400516_102400580_102402596_102402680_102403894_102404004_102405098_102405217_102414799_102414989_102416196_102416388_102419084
Isoform_77992_334	chr9	+	393	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	7	189	7	-6	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATATGCCCACTTGGT	NA	False	NA	11	True	AATAAA	-11	NA	102503501	102511435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102503546_102506961_102507088_102511212
Isoform_77993_5	chr9	+	720	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	-7	14	-7	-6	multi-exon	FALSE	canonical	3	126	junction_1	699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATATGCCCACTTGGT	NA	False	NA	11	True	AATAAA	-11	NA	102503515	102511435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102503887_102506961_102507088_102511212
Isoform_77996_9	chr9	+	4261	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.4896090146283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102594468	102610612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_102594642_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_77999_123	chr9	+	4186	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	140	2	140	-2	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595006	102610615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_780_4	chr10	-	2770	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	-45	2	-32	-2	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	NA	False	NA	-3	True	AATAAA	-15	NA	34294580	34179606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_7800_7	chr11	-	1687	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	-38	7	-38	-7	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503367	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
Isoform_78000_9	chr9	+	3962	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	70	296	70	-291	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATAAAAGTTTTTAAAAA	NA	False	NA	NA	False	AATACA	-25	NA	102594936	102610321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_78001_4	chr9	+	4310	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	3	15	3	-10	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTATAAGGAGATGTCT	NA	False	NA	2	True	AATAAA	-5	NA	102594869	102610602	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_78003_21	chr9	+	4144	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTGTCTGTCTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	102595675	102610614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_78004_3	chr9	+	4274	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	68.5799524390562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595697	102610615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_102595881_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_78005_5	chr9	+	4326	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	66.4161961505709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595677	102610615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_102595913_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
Isoform_7801_120	chr11	-	1316	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	49	7	0	-7	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503746	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_78011_5	chr9	+	2952	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-23	2078	-3	-2078	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGTAGTCCACAGAA	210	False	NA	NA	False	AATAAA	-27	NA	102988982	103060397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
Isoform_78019_52	chr9	+	5275	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-53	2	-53	-2	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTGATTTGTTCAT	900	False	NA	12	True	AATAAA	-17	NA	103182360	103227625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
Isoform_7802_14	chr11	-	1298	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	134.525239267581	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503746	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503628
Isoform_78021_3	chr9	+	5126	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-53	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	132.54375184763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTATTGATTTGTTC	900	False	NA	10	True	AATAAA	-15	NA	103182360	103227623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
Isoform_78023_3	chr9	+	5645	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	167	87	-45	-87	multi-exon	TRUE	canonical	3	11	junction_1	5.77333187568024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTCATTTTGCAGTC	NA	False	NA	-73	True	AATAAA	-13	NA	103879911	103920930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_78024_5	chr9	+	3072	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32984	87	-318	-87	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTCATTTTGCAGTC	NA	False	NA	-73	True	AATAAA	-13	NA	103912728	103920930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_78025_3	chr9	+	3163	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32975	5	-327	-5	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTTTGGCCAAGTTTA	NA	False	NA	9	True	AATAAA	-23	NA	103912719	103921012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
Isoform_78026_20	chr9	+	3362	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	6	76	6	-76	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTTATTGTCATTT	NA	False	NA	16	True	NA	NA	NA	103940890	104004848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
Isoform_78028_14	chr9	+	2291	9	FSM	ENSMUSG00000032563.17	ENSMUST00000149243.8	2309	9	29	-11	-2	11	multi-exon	FALSE	canonical	3	494	junction_1	31.1879383736726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGTTGATAGACTT	NA	False	NA	NA	False	AATAAA	-13	NA	104930466	104953682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360
Isoform_78029_393	chr9	+	1518	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	2425	-2	-3	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGGTTGTGAAACAGA	NA	False	NA	17	True	ATTAAA	-14	NA	104930466	104954662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
Isoform_7803_20	chr11	-	1442	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	0	-7	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503746	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_78030_15	chr9	+	1614	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	2329	-2	75	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTAATGGGAGGAGGA	NA	False	NA	113	True	GATAAA	-42	NA	104930466	104954758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
Isoform_78033_5	chr9	+	2543	6	NIC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-23	-3	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTATTTATTTAT	NA	False	NA	NA	False	AATACA	-13	NA	105272567	105282663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
Isoform_78035_5	chr9	+	2484	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-25	296	-25	-5	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTCTGTATTTATTT	NA	False	NA	NA	False	AATACA	-11	NA	105272565	105282661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
Isoform_78036_5	chr9	+	2166	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-14	603	-14	-18	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTAAATCAAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	105272576	105282354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
Isoform_78037_13	chr9	+	4527	20	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.7025259626095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520181	105564848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
Isoform_78038_88	chr9	+	4866	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	-162	7	0	1	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGAGTTGGGATTTTTT	NA	False	NA	25	True	AGTAAA	-16	NA	105520206	105564849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
Isoform_7804_4	chr11	-	1439	5	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	33	junction_4	150.308017084918	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503757	115498746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503628
Isoform_78041_187	chr9	+	3713	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	1	33	0	-33	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048127	106068305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
Isoform_78044_35	chr9	+	3613	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	0	-33	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048127	106068305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
Isoform_78047_405	chr9	+	1563	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	27	6	-2	-2	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACTGAGCCTGGGT	NA	False	NA	13	True	AATAAA	-10	NA	106080333	106092582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
Isoform_7805_8	chr11	-	2272	3	ISM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	351	-1252	-50	-7	3prime_fragment	FALSE	canonical	3	382	junction_2	12	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTGCGTATTTCCA	NA	False	NA	-7	True	AATAAA	-11	NA	115503379	115498750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_115500262_115500364_115500475_115502728
Isoform_78055_38	chr9	+	1222	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	1	-404	1	-2	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATACTGAGCCTGGGT	NA	False	NA	13	True	AATAAA	-10	NA	106089388	106092582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
Isoform_78056_92	chr9	+	1403	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	302	632	-17	-1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTGGGATTGGG	9859	False	NA	19	True	AATAAA	-31	NA	106158561	106227088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_78057_4	chr9	+	2045	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	293	-1	-26	1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTTGCCTGATCTTG	9850	False	NA	23	True	AGTAAA	-17	NA	106158552	106227721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
Isoform_78058_8	chr9	+	1376	11	NIC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	88.6248272212702	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCACATCTTACCCAG	9846	False	NA	7	True	AATAAA	-19	NA	106158548	106227076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
Isoform_78059_5	chr9	+	3154	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	57	2	57	1	multi-exon	FALSE	canonical	3	135	junction_1	12	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGTCCTGGTGTTCAA	NA	False	NA	36	True	AATAAA	-17	NA	106245887	106252921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106246523_106247899_106248335_106250837
Isoform_7806_5	chr11	-	1899	4	FSM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-21	-1257	2	-2	multi-exon	FALSE	canonical	3	324	junction_3	34.4222150491349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCGTATTTCCATAGCA	NA	False	NA	-2	True	AATAAA	-16	NA	115503751	115498745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115500262_115500364_115500475_115502728_115502861_115503610
Isoform_78061_241	chr9	+	735	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-4	2	-4	-1	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTGTCTGTTGTCAT	NA	False	NA	1	True	AATAAA	-17	NA	106306648	106308765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
Isoform_78064_28	chr9	+	861	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	1	-396	1	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306761	106308767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
Isoform_78067_17	chr9	+	1017	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	8	-180	1	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306761	106308767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106307214_106307506_106307572_106308267
Isoform_78068_4	chr9	+	1445	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	297	3	19	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGCTTTTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	106325870	106330119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
Isoform_78070_524	chr9	+	2029	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	4	2	1	-2	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGTGCAGTAATACTAG	1604	False	NA	25	True	AATAAA	-18	NA	106331044	106341209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
Isoform_78071_24	chr9	+	1831	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGTGCAGTAATACT	1603	False	NA	23	True	AATAAA	-16	NA	106331043	106341207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
Isoform_78076_387	chr9	+	1553	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	31	2	-18	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354498	106362621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
Isoform_78077_13	chr9	+	1594	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	-13	5	-13	3	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTCCCTTGTTCCTCT	NA	False	NA	18	True	ATTAAA	-18	NA	106354454	106362618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
Isoform_78081_13	chr9	+	5649	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	94	-4	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTCCTTGTTTTCTTT	NA	False	NA	12	True	AATAAA	-23	NA	106699166	106758187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
Isoform_78084_8	chr9	+	2162	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	672	16	-12	-16	multi-exon	FALSE	canonical	1	4	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGGTGTCTGGAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	107173896	107179170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107174234_107177122_107177344_107177566
Isoform_78085_80	chr9	+	2108	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	61	25	61	-25	multi-exon	FALSE	canonical	3	142	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCTCCTGGGCTCCG	NA	False	NA	8	True	AATAAA	-13	NA	107411204	107415847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107412529_107415063
Isoform_78086_222	chr9	+	2071	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	98	25	98	-25	multi-exon	FALSE	canonical	3	142	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCTCCTGGGCTCCG	NA	False	NA	8	True	AATAAA	-13	NA	107411241	107415847	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107412529_107415063
Isoform_78087_39	chr9	+	2112	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	94	-12	94	12	multi-exon	FALSE	canonical	3	142	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCATCTTTATCAGA	NA	False	NA	45	True	NA	NA	NA	107411237	107415884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107412529_107415063
Isoform_7809_33	chr11	-	2271	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	36	0	-2	0	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	False	NA	-13	True	AATAAA	-17	NA	115518935	115505003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
Isoform_78090_7	chr9	+	2145	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	61	-12	61	12	multi-exon	FALSE	canonical	3	142	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCATCTTTATCAGA	NA	False	NA	45	True	NA	NA	NA	107411204	107415884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107412529_107415063
Isoform_78091_70	chr9	+	1436	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	2	3	2	-3	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGTACTGCTTCA	NA	False	NA	10	True	AATAAA	-21	NA	107419426	107422902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
Isoform_78092_43	chr9	+	1612	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	114	1	114	-1	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTTGGACTCTATAG	NA	False	NA	8	True	AATAAA	-15	NA	107431895	107439461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_78093_3	chr9	+	1755	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	-31	3	-31	-3	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTTTGGACTCTAT	NA	False	NA	6	True	AATAAA	-13	NA	107431750	107439459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_78094_3	chr9	+	1697	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	29	1	29	-1	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTTGGACTCTATAG	NA	False	NA	8	True	AATAAA	-15	NA	107431810	107439461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
Isoform_78095_200	chr9	+	1656	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	9	0	9	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	20	True	AATAAA	-21	NA	107440462	107443311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107440732_107441774_107441896_107442045
Isoform_78097_343	chr9	+	1882	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	6	5	6	-1	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	10	True	ATTAAA	-12	NA	107446321	107449970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
Isoform_78098_7	chr9	+	1819	4	NIC	ENSMUSG00000010047.13	novel	544	2	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.360461448831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTGCTTCTTGTCTT	NA	False	NA	8	True	ATTAAA	-10	NA	107446578	107449968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107446629_107447302_107448270_107448690_107448781_107449256
Isoform_78099_10	chr9	+	2752	3	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	6	-1	intron_retention	FALSE	canonical	3	208	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGCTTCTTGTCTTTT	NA	False	NA	10	True	ATTAAA	-12	NA	107446321	107449970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107448270_107448690_107448781_107449256
Isoform_781_42	chr10	-	2719	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	24	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294524	34179604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_7810_12	chr11	-	2294	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	13	0	-2	0	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	False	NA	-13	True	AATAAA	-17	NA	115518958	115505003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
Isoform_78100_4	chr9	+	2272	3	ISM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-12	883	8	533	intron_retention	FALSE	canonical	3	34	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	107454144	107457294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_107454278_107454751_107455676_107456079
Isoform_78101_41	chr9	+	2143	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-12	883	8	533	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	107454144	107457294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
Isoform_78102_9	chr9	+	2202	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-71	883	-40	533	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	107454085	107457294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
Isoform_78103_6	chr9	+	1498	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	550	5	550	-5	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCTGTGACAGTTTAT	NA	False	NA	7	True	AATAAA	-13	NA	107457865	107461244	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107458135_107460015
Isoform_78105_33	chr9	+	2063	11	ISM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	86	10	2	-10	intron_retention	FALSE	canonical	3	651	junction_3	29.3468908063529	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCCCCCTGTGGCCTTT	NA	False	NA	11	True	ATTAAA	-23	NA	107464926	107470227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474
Isoform_78106_1130	chr9	+	1970	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	87	-1	3	1	multi-exon	FALSE	canonical	3	631	junction_11	35.5716016363504	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464927	107470238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
Isoform_78107_18	chr9	+	2069	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	-12	-1	-12	1	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464828	107470238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
Isoform_78113_16	chr9	+	2072	11	FSM	ENSMUSG00000010048.11	ENSMUST00000194932.6	2054	11	-7	-11	-7	11	multi-exon	FALSE	canonical	3	631	junction_10	36.8511872264653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTCTTGCCTTCCCT	NA	False	NA	32	True	ATTAAA	-44	NA	107464917	107470248	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
Isoform_78117_18	chr9	+	2084	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	-53	11	-22	-6	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGTTGCCCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	107765327	107780327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
Isoform_78118_43	chr9	+	3031	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	238	8	4	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813110	107826882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_78119_4	chr9	+	3498	8	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	40	junction_4	5.27605294646268	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTGGCCACCCTCTT	NA	False	NA	5	True	AATAAA	-13	NA	107813098	107826877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107824119_107824280_107824360_107824578_107824667_107824942
Isoform_7812_9	chr11	-	1512	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	-14	809	-14	207	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCATTCCTTGTGTCACTC	NA	False	NA	-16	True	ATTAAA	-8	NA	115518985	115505812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
Isoform_78122_352	chr9	+	1949	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	15	742	4	3	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828169	107848727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_78123_30	chr9	+	2688	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	15	3	4	-3	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGGTTTGGCAGAGTA	NA	False	NA	1	True	NA	NA	NA	107828169	107849466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_78124_21	chr9	+	2552	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-1	3	intron_retention	TRUE	canonical	3	271	junction_2	36.9687217865663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828164	107848727	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
Isoform_78125_8	chr9	+	4304	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	111.90781920849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6847	False	NA	16	True	AATAAA	-16	NA	107879826	107925980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922661
Isoform_78126_16	chr9	+	4987	5	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	133	1	0	-1	intron_retention	FALSE	canonical	3	292	junction_3	27.3541587331799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6853	False	NA	16	True	AATAAA	-16	NA	107879832	107925980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923
Isoform_7813_6	chr11	-	1298	6	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	2	212	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	57.631241527491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGTCACTCCTATA	NA	False	NA	-11	True	ATTAAA	-13	NA	115518936	115505807	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115518890
Isoform_78130_25	chr9	+	4492	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6853	False	NA	15	True	AATAAA	-15	NA	107879832	107925979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
Isoform_78135_193	chr9	+	4426	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	132	1	-1	-1	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6852	False	NA	16	True	AATAAA	-16	NA	107879831	107925980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
Isoform_7814_3	chr11	-	2124	6	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	57.631241527491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTGACTGCAGACCA	NA	False	NA	-15	True	AATAAA	-15	NA	115518960	115505005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115518890
Isoform_78140_4	chr9	+	4557	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	17	junction_5	122.664746361781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6843	False	NA	16	True	AATAAA	-16	NA	107879822	107925980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922222_107922661
Isoform_78141_13	chr9	+	2227	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	2	-72	-1	38	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGCTGTGACTGCT	6864	False	NA	74	True	TATAAA	-44	NA	107879843	107923380	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
Isoform_78143_5	chr9	+	4839	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-10	-2672	-1	-1	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCAAGTCTGTGTG	6852	False	NA	16	True	AATAAA	-16	NA	107879831	107925980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
Isoform_78144_8	chr9	+	1419	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGGACTGGAAGTCAA	NA	False	NA	27	True	NA	NA	NA	107926472	107928899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78145_5	chr9	+	1630	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCAGTCCTTGTTGTT	NA	False	NA	9	True	NA	NA	NA	107926476	107929114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78146_16	chr9	+	1463	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-34	0	2	0	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926489	107928901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78148_3	chr9	+	1692	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-51	-212	5	-2	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGCAGTCCTTGTTGT	NA	False	NA	8	True	NA	NA	NA	107926472	107929113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78149_39	chr9	+	1765	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	50	887	3	-2	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGCAGTCCTTGTTGT	NA	False	NA	8	True	NA	NA	NA	107926490	107929113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78150_70	chr9	+	1554	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	49	1099	2	0	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926489	107928901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
Isoform_78151_6	chr9	+	1633	8	FSM	ENSMUSG00000070284.11	ENSMUST00000137284.8	1853	8	2	218	2	-4	multi-exon	FALSE	canonical	3	100	junction_6	10.1196918562428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCCTGGACTGGAAGTC	NA	False	NA	25	True	NA	NA	NA	107926489	107928897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928442_107928524
Isoform_78152_45	chr9	+	2258	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	5	-1	5	1	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTGCTTCTTAGTTTCT	6668	False	NA	19	True	CATAAA	-24	NA	107957639	107962203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
Isoform_78153_4	chr9	+	2504	16	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-3	1	intron_retention	FALSE	canonical	3	16	junction_11	8.54686427228659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATAGAGTGCTTCTTAG	6660	False	NA	14	True	CATAAA	-19	NA	107957631	107962198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
Isoform_78154_52	chr9	+	2110	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	23	0	-3	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167650	108173697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
Isoform_78160_415	chr9	+	2035	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	47	0	-5	0	multi-exon	FALSE	canonical	3	166	junction_5	15.4029218007494	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174115	108179501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_78161_39	chr9	+	2072	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	10	0	10	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174078	108179501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_78164_23	chr9	+	2132	8	NIC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	166	junction_4	16.1042521954765	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174120	108179501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
Isoform_78165_1104	chr9	+	2040	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	166	-9	-144	9	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGTGTTGCTTTC	NA	False	NA	24	True	AATAAA	-24	NA	108183493	108215142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
Isoform_78167_1563	chr9	+	1919	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	276	2	-34	-2	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTATTCTCTTGT	NA	False	NA	13	True	AATAAA	-13	NA	108183603	108215131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
Isoform_78169_267	chr9	+	1540	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	133	524	133	-524	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGATGTAGTATTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	108183460	108214609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
Isoform_7817_202	chr11	-	2672	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	36	1	15	-1	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTCTTCATTTCTC	4506	False	NA	-2	True	AATAAA	-18	NA	115599387	115534871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
Isoform_7818_153	chr11	-	2715	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTCTTCATTTCTC	4463	False	NA	-2	True	AATAAA	-18	NA	115599430	115534871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
Isoform_78185_3127	chr9	+	848	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	222	2	0	-2	multi-exon	FALSE	canonical	3	8868	junction_1	0	3127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTGTGTGTCCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	108216474	108217540	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108216758_108216975
Isoform_78187_65	chr9	+	938	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	130	4	-59	-4	multi-exon	FALSE	canonical	3	8868	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTTTGTGTGTCCTGT	NA	False	NA	14	True	AATAAA	-14	NA	108216382	108217538	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108216758_108216975
Isoform_78192_9	chr9	+	3340	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	37	285	-7	1	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGATGTTGTCCTCTAG	NA	False	NA	11	True	AGTAAA	-15	NA	108225088	108269459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_78193_5	chr9	+	3602	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	36	24	-8	1	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGGGTGCAGTGTGT	NA	False	NA	40	True	NA	NA	NA	108225087	108269720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
Isoform_78195_5	chr9	+	2945	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	15	132	7	0	multi-exon	FALSE	canonical	3	208	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACCAATGGCACAG	202	False	NA	14	True	AATAAA	-7	NA	108337740	108343005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108337817_108340136
Isoform_78197_13	chr9	+	5599	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	29	1	5	-1	multi-exon	TRUE	canonical	3	106	junction_6	29.6719037980376	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9121	False	NA	18	True	AATAAA	-15	NA	108357084	108367728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
Isoform_782_8	chr10	-	1636	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-29	1136	-29	-480	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTCAGTCTGTCTTTT	NA	False	NA	NA	False	AATGAA	-16	NA	34294577	34180740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
Isoform_78202_7	chr9	+	4664	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	61.820028925352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108367928	108378896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
Isoform_78203_34	chr9	+	4524	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-11	-1	0	1	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108368043	108379517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78204_29	chr9	+	4630	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-117	-1	-101	1	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108367937	108379517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78206_3	chr9	+	4544	27	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	69.5979153601974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108368043	108378897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
Isoform_78207_3	chr9	+	4660	27	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-111	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	69.5979153601974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108367927	108378897	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
Isoform_78208_20	chr9	+	4530	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	0	-13	0	-7	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAACATGTTATGGCTC	NA	False	NA	24	True	AATAAA	-28	NA	108368043	108379529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78209_20	chr9	+	4657	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-130	-10	113	-10	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAACATGTTATGG	NA	False	NA	21	True	AATAAA	-25	NA	108367913	108379526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78210_5	chr9	+	4672	27	FSM	ENSMUSG00000006676.17	ENSMUST00000085044.14	4520	27	-154	2	89	-2	multi-exon	FALSE	canonical	3	46	junction_5	64.3458319914706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367889	108379514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78212_6	chr9	+	4647	27	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	112	2	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	71.9086061131496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGACTGATCCACAACA	NA	False	NA	13	True	AATAAA	-17	NA	108367912	108379518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
Isoform_78214_1126	chr9	+	2443	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	353	4	0	1	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	108385257	108393136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
Isoform_78216_26	chr9	+	2517	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	468	junction_2	38.846487444515	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385255	108393135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
Isoform_78225_28	chr9	+	3295	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	232.186649056314	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78228_432	chr9	+	3235	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-23	-172	0	1	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78234_9	chr9	+	3307	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	234.862853597584	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108394452_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78235_151	chr9	+	3247	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1147	False	NA	65	True	NA	NA	NA	108394285	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78240_25	chr9	+	3510	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	9	1	multi-exon	FALSE	canonical	3	61	junction_1	223.453440340488	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1668	False	NA	65	True	NA	NA	NA	108394806	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78241_8	chr9	+	3449	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	10	1	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1669	False	NA	65	True	NA	NA	NA	108394807	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78242_19	chr9	+	3380	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	55	1	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTGGAGAACGTGTCT	1738	False	NA	65	True	NA	NA	NA	108394876	108437363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
Isoform_78248_26	chr9	+	1728	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1178	False	NA	17	True	AATAAA	-10	NA	108437667	108442764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_78250_1306	chr9	+	1656	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	183	19	-1	1	multi-exon	FALSE	canonical	3	1280	junction_13	396.993628196225	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1178	False	NA	17	True	AATAAA	-10	NA	108437667	108442764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_78251_42	chr9	+	1724	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	115	19	-38	1	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGACAACTGAT	1110	False	NA	17	True	AATAAA	-10	NA	108437599	108442764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
Isoform_78256_5	chr9	+	1888	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	10	junction_5	47.0368912217046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447094	108449970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448634_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_78257_75	chr9	+	1735	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	10	1	10	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
Isoform_78259_3	chr9	+	1969	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	128	junction_6	9.80752262296652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591
Isoform_78260_34	chr9	+	1880	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	128	junction_6	18.4357409183867	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_78261_4	chr9	+	1974	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	1	intron_retention	FALSE	canonical	3	128	junction_6	19.4679223339318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447094	108449971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
Isoform_78262_3	chr9	+	2242	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	128	junction_5	9.44803186502083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447094	108449973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449497_108449591
Isoform_78263_6	chr9	+	2154	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	128	junction_5	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447093	108449973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_78264_3	chr9	+	2212	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	128	junction_5	19.5740352800044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447127	108449970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449661_108449749
Isoform_78265_9	chr9	+	2235	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	136	junction_2	17.864569884071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447102	108449970	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_78266_4	chr9	+	1822	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	intron_retention	FALSE	canonical	2	4	junction_2	48.787015070674	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	108447094	108449972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
Isoform_78267_611	chr9	+	1707	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	76	0	76	0	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5153	False	NA	3	True	NA	NA	NA	108539372	108561840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
Isoform_78268_68	chr9	+	1776	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	7	0	7	0	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5084	False	NA	3	True	NA	NA	NA	108539303	108561840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
Isoform_78276_16	chr9	+	4904	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	62	-1	62	1	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGGTGTGTCTCCTG	1365	False	NA	21	True	AATAAA	-21	NA	108569403	108627636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
Isoform_78278_3	chr9	+	1988	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-15	847	11	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTGTCTTGTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	108661005	108675186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108661070_108673262
Isoform_78279_3	chr9	+	1679	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-9	1150	-9	-8	multi-exon	FALSE	canonical	3	119	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAAAGGCTTGGCTCA	NA	False	NA	0	True	AATAAA	-14	NA	108661011	108674883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108661070_108673262
Isoform_78280_11	chr9	+	1009	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-59	-343	10	-4	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGCTTGGCTCACCCA	NA	False	NA	4	True	AATAAA	-18	NA	108661004	108674887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
Isoform_78281_5	chr9	+	1289	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-41	-641	2	-3	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAATGTGTCTTGTAG	NA	False	NA	NA	False	AATAAA	-13	NA	108661022	108675185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
Isoform_78282_5	chr9	+	878	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	12	301	12	-4	multi-exon	FALSE	canonical	3	25	junction_2	47	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGCTTGGCTCACCCA	NA	False	NA	4	True	AATAAA	-18	NA	108661006	108674887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108661070_108673262_108673596_108674405
Isoform_78283_8	chr9	+	1828	7	NIC	ENSMUSG00000032599.13	novel	1846	6	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	38.4693239983352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATACAGTGCTGCTGTCGT	NA	False	NA	12	True	AATACA	-16	NA	108661010	108683529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108661070_108673262_108673596_108675308_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_78284_14	chr9	+	1768	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661004	108683532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
Isoform_78286_52	chr9	+	2962	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	7	391	2	-391	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3157	False	NA	5	True	AATAAA	-16	NA	108685573	108695652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_78288_5	chr9	+	3357	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	5	-2	0	2	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCCGGTGCTCCCTT	3155	False	NA	NA	False	AATAAA	-24	NA	108685571	108696045	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_78289_4	chr9	+	2471	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-393	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	23.3436419573877	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3155	False	NA	3	True	AATAAA	-14	NA	108685571	108695650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_7829_13	chr11	-	4943	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-17	3	-8	-3	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTGTGTTTGCAT	4103	False	NA	-4	True	AATGAA	-15	NA	115704473	115690011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
Isoform_78291_3	chr9	+	3204	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-394	intron_retention	FALSE	canonical	3	72	junction_6	8.15551326982029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGCTTCCCTGTAT	3161	False	NA	2	True	AATAAA	-13	NA	108685577	108695649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
Isoform_78293_38	chr9	+	2657	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	-90	-15	2	-1	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731243	108742111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_78295_24	chr9	+	3307	21	FSM	ENSMUSG00000023259.18	ENSMUST00000239562.1	2659	21	-654	6	0	-1	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731241	108742111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_78301_6190	chr9	+	1584	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	68	1	-13	-1	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	6190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765768	108778690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
Isoform_7831_85	chr11	-	3975	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	-5	1	-5	-1	multi-exon	TRUE	canonical	3	54	junction_14	12.1025708930881	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTCTTGGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-32	NA	115824308	115783421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
Isoform_78319_39	chr9	+	1813	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	44	53	7	0	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108867676	108886792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_7832_15	chr11	-	3607	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_19	18.5488797998223	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824305	115783424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
Isoform_78320_62	chr9	+	1805	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	24	5	7	-5	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCCCCTTTCTTCAG	NA	False	NA	13	True	AATAAA	-13	NA	108867676	108886787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_78321_3	chr9	+	1879	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	8	-53	8	0	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTACTTCTTGAAC	NA	False	NA	71	True	NA	NA	NA	108867660	108886845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
Isoform_78322_8	chr9	+	1505	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	48	-515	-37	-2	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCCTTTCTTCAGCGC	NA	False	NA	16	True	AATAAA	-16	NA	108883978	108886790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
Isoform_78324_4	chr9	+	2402	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	-876	0	876	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGGAGGCACCGTCT	NA	False	NA	NA	False	AATAAA	-36	NA	108911560	108922433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
Isoform_78325_70	chr9	+	1523	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	3	0	-3	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAGTTATATCAGACT	NA	False	NA	11	True	ATTAAA	-25	NA	108911560	108921554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
Isoform_78326_158	chr9	+	1061	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	13	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661838	109672042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78329_10	chr9	+	954	6	FSM	ENSMUSG00000032478.15	ENSMUST00000198201.5	930	6	-16	-8	0	8	multi-exon	FALSE	canonical	3	47	junction_2	211.367547177896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCAGTACTCCTGTGCA	NA	False	NA	15	True	AATAAA	-22	NA	109661838	109672032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109661876_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_7833_399	chr11	-	1306	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	30	70	30	-70	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCGGTAGCCACCTGC	NA	False	NA	-40	True	AATAAA	-12	NA	115903515	115899352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_78330_5	chr9	+	1117	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	223.458733451068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661838	109672040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_109661876_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78332_187	chr9	+	1120	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	42	-443	4	-2	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661858	109672040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78333_8	chr9	+	1026	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200091.5	715	6	2	-313	1	-2	multi-exon	FALSE	canonical	3	47	junction_2	202.945707025303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661855	109672040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109661957_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78334_5	chr9	+	1183	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	215.187321497651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661855	109672042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_109661957_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78335_6	chr9	+	1157	7	NNC	ENSMUSG00000032478.15	novel	719	7	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	221.058564387107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGTACTCCTGTGC	NA	False	NA	14	True	AATAAA	-21	NA	109661866	109672031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_109661957_109662263_109662364_109664331_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78337_14	chr9	+	1214	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	-50	-299	-38	4	multi-exon	FALSE	canonical	3	493	junction_3	57.3431774494578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGGCAGTACTCCTG	NA	False	NA	11	True	AATAAA	-18	NA	109662059	109672028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
Isoform_78339_87	chr9	+	3631	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	1	0	1	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704647	109722963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_78341_47	chr9	+	3663	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-31	0	-31	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704615	109722963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_78346_8	chr9	+	3667	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704607	109722962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_78348_16	chr9	+	3628	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704647	109722963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
Isoform_7835_10	chr11	-	1483	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	30	-107	30	107	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	115903515	115899175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_78350_8	chr9	+	914	6	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-18	-16	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	120.044325147006	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109760849	109857173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109856966
Isoform_78355_4	chr9	+	4960	9	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-82	18061	-18	-2866	intron_retention	FALSE	canonical	3	256	junction_1	41.9940471971921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109760849	109894954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084
Isoform_78357_12	chr9	+	5013	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	304	774	-36	8	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCCTGGGAGTGTC	NA	False	NA	31	True	AATAAA	-23	NA	109760831	109912249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78358_37	chr9	+	4944	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	364	783	24	-1	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760891	109912240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78359_16	chr9	+	5723	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	363	5	23	3	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760890	109913018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78360_3	chr9	+	5756	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	332	3	-8	-3	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGCTTCTGTCCTCT	NA	False	NA	22	True	AATAAA	-22	NA	109760859	109913020	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78361_4	chr9	+	5620	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-44	-3	20	3	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760887	109913018	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
Isoform_78362_12	chr9	+	4843	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-45	775	19	-1	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760886	109912240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
Isoform_78363_4	chr9	+	4940	19	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	76.9171632342223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGAAATGGCCT	NA	False	NA	22	True	AATAAA	-14	NA	109760898	109912240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908965_109910488_109910679_109910802
Isoform_78364_8	chr9	+	4741	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760886	109912239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78365_5	chr9	+	5518	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGTTGCTTCTGTC	NA	False	NA	18	True	AATAAA	-18	NA	109760886	109913016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
Isoform_78371_167	chr9	+	2589	23	ISM	ENSMUSG00000032481.18	ENSMUST00000200237.5	3078	25	-21	9537	-21	-1827	5prime_fragment	FALSE	canonical	3	1144	junction_15	79.0118727347849	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTGGGCCCGAGCATG	2481	False	NA	41	True	NA	NA	NA	109961083	110033394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279
Isoform_78378_73	chr9	+	3542	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-7	3	-7	-3	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCATAGTTCCTGGC	2495	False	NA	13	True	ATTAAA	-23	NA	109961097	110064356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
Isoform_7838_9	chr11	-	1382	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	-27	51	-27	-51	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGAGGTGGGTAACAT	NA	False	NA	-21	True	AATAAA	-31	NA	115903572	115899333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_78382_13	chr9	+	5628	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	83	6	26	-6	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCCCATTCTCTGC	2528	False	NA	18	True	AATAAA	-18	NA	109961130	110069240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
Isoform_78387_53	chr9	+	2173	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1617	0	-83	0	multi-exon	FALSE	canonical	3	35	junction_4	8.38152730712011	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	NA	False	NA	20	True	AATAAA	-21	NA	110074467	110091644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_78388_58	chr9	+	2140	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1650	0	-50	0	multi-exon	FALSE	canonical	3	35	junction_4	8.38152730712011	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	NA	False	NA	20	True	AATAAA	-21	NA	110074500	110091644	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_78389_8	chr9	+	2451	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1347	-8	-353	8	multi-exon	TRUE	canonical	3	35	junction_4	8.38152730712011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCGTGGCCTCCTGTCTG	9784	False	NA	28	True	AATAAA	-29	NA	110074197	110091652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_7839_9	chr11	-	2050	7	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	23	-55	intron_retention	FALSE	canonical	3	761	junction_3	60.2091262923561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCCAGAGGTGGGTA	NA	False	NA	-25	True	AATAAA	-27	NA	115903522	115899337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_115899541_115899628_115899792_115899873_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
Isoform_78390_4	chr9	+	2226	5	FSM	ENSMUSG00000032482.10	ENSMUST00000035058.10	3870	5	1642	2	-58	-2	multi-exon	FALSE	canonical	2	3	junction_4	20.3531324370476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCTTAGTGCCGTGG	NA	False	NA	17	True	AATAAA	-18	NA	110074492	110091641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085370_110091127
Isoform_78391_6	chr9	+	1992	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	114	1	114	-1	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCTTAGTGCCGTGGC	NA	False	NA	18	True	AATAAA	-19	NA	110075246	110091642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_78392_4	chr9	+	2157	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	-52	2	-52	-2	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCCTTAGTGCCGTGG	NA	False	NA	17	True	AATAAA	-18	NA	110075080	110091641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
Isoform_78393_32	chr9	+	2064	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-783	-8	4	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTGTGTTCCTGTGT	2205	False	NA	10	True	AATAAA	-18	NA	110134263	110151174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
Isoform_78394_35	chr9	+	1282	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-1	-8	1	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGAGGTTGTCTTTT	2205	False	NA	8	True	AATAAA	-18	NA	110134263	110150392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
Isoform_78395_4	chr9	+	2138	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2205	False	NA	6	True	AATAAA	-14	NA	110134263	110151170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
Isoform_78397_4	chr9	+	4114	24	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-3	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	30.2064102662336	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCACATTTACCAGGG	NA	False	NA	-3	True	AATAAA	-9	NA	110162420	110214004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209274_110209375_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
Isoform_78399_4	chr9	+	879	6	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	28	15	1	-2	intron_retention	FALSE	canonical	3	695	junction_3	21.9544984001001	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGTTGTTTCATTTC	8510	False	NA	14	True	AATAAA	-14	NA	110485598	110540659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153
Isoform_784_45	chr10	-	824	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-6	3230	-6	-3230	multi-exon	FALSE	canonical	3	339	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAAGCGCTTT	NA	False	NA	NA	False	NA	NA	NA	37014922	37012600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_37012932_37014429
Isoform_78400_272	chr9	+	791	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	30	13	3	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTGTTTCATTTCCT	8512	False	NA	16	True	AATAAA	-16	NA	110485600	110540661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
Isoform_78404_8	chr9	+	1441	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	15	0	15	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCTTTCTGAGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	110687049	110693697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
Isoform_78405_15	chr9	+	1480	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9310	1845	21	-1845	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	110789922	110811289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_78408_7	chr9	+	1535	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9255	1845	-34	-1845	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	110789867	110811289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_78409_6	chr9	+	1618	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9170	1847	-119	-1847	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110789782	110811287	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_78410_4	chr9	+	1490	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	30	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	82.1734277137216	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789931	110811288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
Isoform_78411_6	chr9	+	1317	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	26	-1846	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789927	110811288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_78413_10	chr9	+	3284	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	0	-1445	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947180	111054735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_78414_27	chr9	+	1845	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-7	1	-5	-1	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTTGGATTTTGTTTG	NA	False	NA	45	True	AATGAA	-17	NA	110947173	111053289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_78416_19	chr9	+	2926	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	17	-1104	-5	-341	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAATTGTCCCTTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	110947197	111054394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_78418_18	chr9	+	1773	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-29	1447	-5	-1	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTTGGATTTTGTTTG	NA	False	NA	45	True	AATGAA	-17	NA	110947173	111053289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
Isoform_78419_15	chr9	+	3019	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	-16	2	-16	-2	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTGCCTTGTTCAATG	NA	False	NA	NA	False	AATAAA	-18	NA	111268132	111318184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
Isoform_78422_4	chr9	+	3896	21	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-22	16362	combination_of_known_splicesites	FALSE	canonical	3	151	junction_16	20.286140589082	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113570518	113701159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690
Isoform_78424_21	chr9	+	6315	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-16	14	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTAGCTCAGCTCTTT	NA	False	NA	29	True	AATAAA	-30	NA	113570524	113748764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
Isoform_78426_7	chr9	+	3660	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	191	-1	191	1	multi-exon	TRUE	canonical	3	95	junction_1	91.3275141660497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTCACTCATTTCAAA	1493	False	NA	21	True	AATAAA	-21	NA	113760192	113806268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_78427_10	chr9	+	3423	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	227	200	227	-2	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1529	False	NA	15	True	AATAAA	-16	NA	113760228	113806067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_78428_19	chr9	+	3319	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	225	198	225	0	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1527	False	NA	17	True	AATAAA	-18	NA	113760226	113806069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_78429_7	chr9	+	3528	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	215	-1	215	1	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTCACTCATTTCAAA	1517	False	NA	21	True	AATAAA	-21	NA	113760216	113806268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
Isoform_78430_3	chr9	+	3851	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	232	0	232	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATGTATTGAATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	113886439	113927796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
Isoform_78431_3	chr9	+	3776	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	300	7	300	-7	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTTGATAAATGTATT	NA	False	NA	NA	False	AATAAA	-12	NA	113886507	113927789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
Isoform_78432_97	chr9	+	3184	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	43	-306	43	306	multi-exon	FALSE	canonical	3	40	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230215	114236650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114230338_114233588
Isoform_78433_14	chr9	+	3239	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	-12	-306	-12	306	multi-exon	FALSE	canonical	3	40	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230160	114236650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114230338_114233588
Isoform_78437_11	chr9	+	2491	10	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	74	29878	42	-29878	5prime_fragment	FALSE	canonical	3	295	junction_2	41.9046536795139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTCTGGTTTCTGTT	NA	False	NA	9	True	AATACA	-16	NA	114230217	114273567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
Isoform_78440_260	chr9	+	2325	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	72	-1	40	1	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230215	114303446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_78441_87	chr9	+	2372	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	26	-2	-6	2	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230169	114303447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_78443_63	chr9	+	2155	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230215	114303446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
Isoform_78446_280	chr9	+	2629	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-17	-11	-17	11	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTTGCCTTTTCT	2109	False	NA	14	True	AATAAA	-27	NA	114517840	114553381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
Isoform_78447_409	chr9	+	2606	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	6	-11	6	11	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGTGTTGCCTTTTCT	2132	False	NA	14	True	AATAAA	-27	NA	114517863	114553381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
Isoform_7845_1130	chr11	-	1659	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	3	331	3	-331	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	1130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGTGTCAAACCTAAAT	NA	False	NA	-16	True	AATAAA	-13	NA	115915327	115913117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
Isoform_78457_448	chr9	+	3353	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	30	0	30	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560270	114578412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
Isoform_78461_3	chr9	+	970	2	ISM	ENSMUSG00000052724.8	ENSMUST00000150678.2	965	3	990	-9	990	9	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGCTTTCTTTCTTA	NA	False	NA	NA	False	AATAAA	-43	NA	114610157	114611334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_114610550_114610756
Isoform_78462_22	chr9	+	2615	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-136	-2	-136	0	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGTTGGTATTTGTTGAA	NA	False	NA	8	True	ATTAAA	-18	NA	114807500	115061293	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78464_16	chr9	+	3644	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-121	-1046	-121	1044	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114807515	115062337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78465_3	chr9	+	2878	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-402	1	-402	-1	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCGTTGGTATTTGTT	NA	False	NA	5	True	ATTAAA	-15	NA	114807234	115061290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78467_3	chr9	+	2424	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-140	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCGTTGGTATTTGTT	NA	False	NA	5	True	ATTAAA	-15	NA	114807496	115061290	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78468_4	chr9	+	3162	12	FSM	ENSMUSG00000040875.13	ENSMUST00000182384.8	2158	12	40	-1044	40	1044	multi-exon	FALSE	canonical	1	3	junction_1	20.7380354832004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	114819855	115062337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_114819891_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78469_9	chr9	+	2188	5	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	149245	-1046	95985	1044	3prime_fragment	FALSE	canonical	3	73	junction_2	2.54950975679639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTTGTGTCTTGTGT	6060	False	NA	NA	False	AATATA	-10	NA	115045591	115062337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
Isoform_78472_7	chr9	+	1249	5	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-45	8754	-23	71	5prime_fragment	FALSE	canonical	3	140	junction_4	16.3783393541592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGTTGTGTCTTAATT	9620	False	NA	NA	False	AATATA	-26	NA	117869601	117880798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421
Isoform_78473_4	chr9	+	2560	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-59	-2	21	2	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTCTTTTTAACTG	9606	False	NA	NA	False	AATAAA	-19	NA	117869587	117889554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
Isoform_78476_19	chr9	+	3141	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-267	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAATTGGATGTGAAA	9620	False	NA	NA	False	ATTAAA	-17	NA	117869601	117892640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
Isoform_78479_6	chr9	+	3169	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	7	-267	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAATTGGATGTGAAA	9592	False	NA	NA	False	ATTAAA	-17	NA	117869573	117892640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
Isoform_78482_4	chr9	+	3407	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTATTTTGTGATTC	9620	False	NA	3	True	AATATA	-17	NA	117869601	117892906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
Isoform_78484_53	chr9	+	3091	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	38	267	-20	-267	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAATTGGATGTGAAA	9623	False	NA	NA	False	ATTAAA	-17	NA	117869604	117892640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_78487_9	chr9	+	3385	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	7	4	7	-4	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGCTGTATTTTGTGA	9592	False	NA	0	True	AATATA	-14	NA	117869573	117892903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
Isoform_78496_26	chr9	+	3166	15	ISM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	-15	25776	-15	25	5prime_fragment	FALSE	canonical	3	96	junction_12	16.3357626959118	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAGAAATGCAAGAA	NA	False	NA	45	True	TTTAAA	-35	NA	118335319	118385811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640
Isoform_78501_8	chr9	+	3070	14	NNC	ENSMUSG00000038708.11	novel	2858	14	NA	NA	-15	16	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_9	33.7661642203234	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGCAGAAAGCAAAAGAA	NA	False	NA	36	True	TTTAAA	-26	NA	118335319	118385802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640
Isoform_78502_7	chr9	+	2706	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	10	193	10	0	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	4717	False	NA	3	True	AATAAA	-16	NA	118881855	118900394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
Isoform_78503_3	chr9	+	2758	20	NIC	ENSMUSG00000038775.15	novel	360	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.42532786213614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	4798	False	NA	3	True	AATAAA	-16	NA	118881936	118900394	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_118882030_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
Isoform_78504_44	chr9	+	1662	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	95	5	-25	-4	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7823	False	NA	23	True	AGTAAA	-14	NA	119170454	119179360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
Isoform_78505_297	chr9	+	1598	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	160	4	-3	-3	multi-exon	FALSE	canonical	3	245	junction_2	23.8777880116768	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGCTTGTCATTTCC	7888	False	NA	24	True	AGTAAA	-15	NA	119170519	119179361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
Isoform_78506_53	chr9	+	3188	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	204	-9	-2	0	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186650	119222395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_78507_21	chr9	+	3138	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186630	119222395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
Isoform_78509_32	chr9	+	1870	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-188	1493	138	1	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231321	119262568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_78510_12	chr9	+	1975	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-293	1493	33	1	multi-exon	TRUE	canonical	3	128	junction_3	23.1622537763491	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231216	119262568	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_78516_18	chr9	+	1855	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	132	4	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231315	119262571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
Isoform_78521_7	chr9	+	3940	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGACCGGTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	119274042	119294576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78522_22	chr9	+	2558	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	17	-4	0	3	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	AAAAAG	-7	NA	119274042	119293308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78524_3	chr9	+	3851	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	0	-1280	0	1	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGATTGGCCACAGTGA	NA	False	NA	NA	False	NA	NA	NA	119274025	119294584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78526_4	chr9	+	2460	6	NIC	ENSMUSG00000042787.16	novel	2571	7	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	32.041223447303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	AAAAAG	-7	NA	119274025	119293308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119291441
Isoform_78527_12	chr9	+	2654	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-27	-3	0	3	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGCATATTTATT	NA	False	NA	NA	False	AAAAAG	-7	NA	119274025	119293308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78529_31	chr9	+	2537	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	17	1278	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274025	119293305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78532_4	chr9	+	3802	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	23	7	6	-7	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGACCGGTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	119274031	119294576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78533_4	chr9	+	2880	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	14	938	-3	340	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTCAGTGTGACTGTCC	NA	False	NA	NA	False	AAAACA	-14	NA	119274022	119293645	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
Isoform_78536_61	chr9	+	3824	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	17	4	0	-4	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCAGTGTGCTGGAC	NA	False	NA	25	True	AATAAA	-13	NA	119723960	119755648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
Isoform_78540_7	chr9	+	1718	8	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	9	-187	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	64.126469430592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1769	False	NA	-3	True	AATAAA	-22	NA	119939448	119953383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949072_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_78541_16	chr9	+	1962	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-15	-187	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1776	False	NA	-3	True	AATAAA	-22	NA	119939455	119953383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_78542_91	chr9	+	1596	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	9	186	9	-186	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACATCACCAGGG	1769	False	NA	-2	True	AATAAA	-23	NA	119939448	119953384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_78543_6	chr9	+	1976	7	NNC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	-10	-186	intron_retention	FALSE	canonical	3	7	junction_3	55.748442927932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACATCACCAGGG	1781	False	NA	-2	True	AATAAA	-23	NA	119939460	119953384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948930_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_78544_3	chr9	+	2147	8	NNC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-15	-188	intron_retention	FALSE	canonical	0	0	junction_3	70.6618853471681	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAGACATCACCAG	1776	False	NA	-4	True	AATAAA	-21	NA	119939455	119953382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948355_119948542_119948948_119949503_119949738_119949914_119951159_119951327_119952707
Isoform_78546_7277	chr9	+	1030	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	98	810	-2	0	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	7277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
Isoform_7856_5	chr11	-	3955	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	91	0	-35	0	multi-exon	TRUE	canonical	3	18	junction_15	5.60845207266718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTATAGTTGGCTT	NA	False	NA	-1	True	AATAAA	-26	NA	115968485	115952920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_7857_5	chr11	-	4239	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	-196	3	-5	-2	multi-exon	FALSE	canonical	3	18	junction_15	5.60845207266718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAAATCTATAGTTGG	NA	False	NA	-4	True	AATAAA	-23	NA	115968772	115952923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_78570_11	chr9	+	782	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	35	719	0	521	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACCTGGCGTGGCTTCT	NA	False	NA	3	True	NA	NA	NA	119978807	119997725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
Isoform_78571_144	chr9	+	1048	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	-14	1	-14	-1	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCAATGCACTTTGTT	NA	False	NA	33	True	AATAAA	-35	NA	120321542	120324395	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
Isoform_78575_33	chr9	+	2925	11	FSM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	21	507	21	-507	multi-exon	FALSE	canonical	3	4	junction_7	3.21869538788622	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTATTTGTTAACTTAA	NA	False	NA	18	True	AATAAA	-20	NA	120368904	120396886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120386457_120386618_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
Isoform_78576_3	chr9	+	2787	10	NIC	ENSMUSG00000041608.9	novel	3453	11	NA	NA	-8	-514	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	4.371625682868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGCGTGTATTTGTT	NA	False	NA	11	True	AATAAA	-13	NA	120368875	120396879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
Isoform_7858_3	chr11	-	944	6	ISM	ENSMUSG00000057948.13	ENSMUST00000155120.2	991	7	299	31	-38	-31	3prime_fragment	FALSE	canonical	3	26	junction_4	7.60526133673262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	115968488	115966253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
Isoform_78581_7822	chr9	+	715	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	73	221	3	1	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	7822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGTGTGGACTCTA	NA	False	NA	17	True	AATAAA	-21	NA	120400582	120403499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
Isoform_78583_156	chr9	+	762	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	26	221	26	1	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGTGTGGACTCTA	NA	False	NA	17	True	AATAAA	-21	NA	120400535	120403499	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
Isoform_7859_83	chr11	-	1796	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	30	0	7	0	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977791	115969398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
Isoform_78596_430	chr9	+	3535	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	88	0	2	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762553	120789573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_78597_155	chr9	+	3626	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-6	3	-6	-2	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762459	120789570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_78598_13	chr9	+	3675	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-52	0	-52	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762413	120789573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_786_6	chr10	-	723	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	6	16	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.93190525885234	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGGTGATGACAATGGT	NA	False	NA	-18	True	AATAAA	-13	NA	39009896	38994815	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
Isoform_78600_8	chr9	+	3496	15	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	29	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	170.049332577944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762912	120789570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
Isoform_7861_11	chr11	-	1646	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	43	-677	20	-2	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTGACTCTTGTG	NA	False	NA	-13	True	AGTAAA	-14	NA	115977778	115969400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
Isoform_78610_8	chr9	+	3548	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	-15	0	7	0	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCTTTCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	121126584	121284948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
Isoform_78611_39	chr9	+	4504	15	ISM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	10	10395	10	-6	5prime_fragment	FALSE	canonical	3	209	junction_1	22.8924949826491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTTAGGTCCTAG	NA	False	NA	3	True	ATTAAA	-13	NA	121126587	121291670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
Isoform_78613_31	chr9	+	5279	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	-10	-1916	0	-1	multi-exon	TRUE	canonical	3	114	junction_15	40.0713718725726	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126567	121303981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
Isoform_78615_5	chr9	+	5386	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	60.0020507462037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAAGCTTTTGTCTTT	NA	False	NA	4	True	AATAAA	-12	NA	121126594	121303977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
Isoform_78616_3	chr9	+	2715	16	NNC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	-8	-3026	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	51.4142219840213	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCAGACAATTA	NA	False	NA	NA	False	NA	NA	NA	121126591	121298355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050
Isoform_78617_30	chr9	+	5208	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	49.7895179103996	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTCTTTTTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	121126577	121303983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
Isoform_78618_4	chr9	+	3093	3	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	93247	7	5967	-5	3prime_fragment	FALSE	canonical	3	114	junction_1	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAAGCTTTTGTCTTT	NA	False	NA	4	True	AATAAA	-12	NA	121289328	121303977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_121289644_121298050_121298154_121301302
Isoform_78619_102	chr9	+	530	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	47	0	4	0	multi-exon	FALSE	canonical	3	377	junction_1	21	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539441	121541987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121539538_121539704_121539782_121541630
Isoform_7862_19	chr11	-	1096	2	FSM	ENSMUSG00000034341.18	ENSMUST00000129532.2	958	2	20	-158	20	158	multi-exon	FALSE	canonical	3	1218	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115977778	115973763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115974774_115977692
Isoform_78621_23	chr9	+	688	2	FSM	ENSMUSG00000032526.12	ENSMUST00000214535.2	1175	2	21	466	1	1	multi-exon	FALSE	canonical	3	419	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCCCATGTCAACTA	NA	False	NA	12	True	AATAAA	-17	NA	121539451	121541988	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121539782_121541630
Isoform_78622_5	chr9	+	1452	14	NIC	ENSMUSG00000032525.16	novel	1460	14	NA	NA	16	-30	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	10.3140049556345	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAGAAGTTTAAGCA	NA	False	NA	NA	False	AAGAAA	-7	NA	121548262	121577229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096
Isoform_78623_4	chr9	+	1423	13	ISM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	22	8680	17	-30	5prime_fragment	FALSE	canonical	3	17	junction_5	9.7581874455363	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAGAAGTTTAAGCA	NA	False	NA	NA	False	AAGAAA	-7	NA	121548263	121577229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096
Isoform_78624_10	chr9	+	3296	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-8	564	intron_retention	FALSE	canonical	3	20	junction_3	6.34388666033558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	8228	False	NA	NA	False	NA	NA	NA	121946340	121997105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
Isoform_78626_13	chr9	+	3146	7	FSM	ENSMUSG00000038145.18	ENSMUST00000118886.9	4811	7	2	1663	-1	564	multi-exon	FALSE	canonical	3	10	junction_2	9.08142181721685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	8255	False	NA	NA	False	NA	NA	NA	121946367	121997105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121946474_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
Isoform_78627_5	chr9	+	3101	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	-6	1663	-3	564	multi-exon	FALSE	canonical	2	8	junction_1	10.6695829346793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	8250	False	NA	NA	False	NA	NA	NA	121946362	121997105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
Isoform_78628_3	chr9	+	3367	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-1	564	intron_retention	FALSE	canonical	1	1	junction_1	11.5245965886278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	8252	False	NA	NA	False	NA	NA	NA	121946364	121997105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_121946569_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
Isoform_78629_15	chr9	+	2982	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	175	0	-6	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180847	122210589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_7863_16	chr11	-	1297	3	FSM	ENSMUSG00000020773.12	ENSMUST00000127235.2	692	3	-24	-581	-24	-6	multi-exon	FALSE	canonical	3	127	junction_2	17	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998590	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997830_115998249
Isoform_78630_13	chr9	+	1404	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	57	1696	57	3	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGATTTTTCAGCT	NA	False	NA	18	True	AATAAA	-23	NA	122180729	122208893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_78631_15	chr9	+	3033	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	124	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180796	122210589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_78633_3	chr9	+	2899	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180844	122210589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_78634_3	chr9	+	2571	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	3	2	1	-2	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGTGGGTGAGCTGTGT	NA	False	NA	2	True	AATAAA	-15	NA	122180797	122210587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
Isoform_78635_3	chr9	+	2944	11	FSM	ENSMUSG00000046603.17	ENSMUST00000136274.3	2909	11	-30	-5	5	-2	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGTTCCAGGATTTC	NA	False	NA	20	True	AATAAA	-20	NA	122634630	122665397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
Isoform_78637_60	chr9	+	2017	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	8	-15	-8	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAAGGACTTTGTTTT	4859	False	NA	3	True	AATAAA	-14	NA	122752121	122760085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
Isoform_78639_14	chr9	+	1361	12	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	19	32519	0	-269	5prime_fragment	FALSE	canonical	3	187	junction_5	22.4016675884587	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGTAGGAAATTGAA	NA	False	NA	NA	False	AAGAAA	-12	NA	122780129	122815279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209
Isoform_78642_7	chr9	+	4837	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	13	8	-6	0	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780123	122847790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
Isoform_78643_765	chr9	+	1017	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	30	6	-2	-4	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942309	122965188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
Isoform_78645_24	chr9	+	1024	8	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	451.937642438712	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942298	122965188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_122942388_122947959_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
Isoform_78648_8	chr9	+	994	5	ISM	ENSMUSG00000035202.9	ENSMUST00000217116.2	3756	21	-10	67356	-3	-8	5prime_fragment	FALSE	canonical	3	41	junction_4	7.58287544405155	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTAACCTGCTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	123196008	123224375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015
Isoform_78649_6	chr9	+	2049	14	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	23	20947	3	-19876	5prime_fragment	FALSE	canonical	3	28	junction_9	7.36776924642996	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTAGAGGCCATTGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	123196014	123270782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528
Isoform_78651_34	chr9	+	4012	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	-28	864	-28	-864	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCACTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123307742	123349753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
Isoform_78654_89	chr9	+	3528	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	29	1	29	-1	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTTGGTACTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	123358852	123421664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
Isoform_78655_6	chr9	+	3032	3	NNC	ENSMUSG00000032536.13	novel	4827	16	NA	NA	5971	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	85	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTCTTTTTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	121289332	121303983	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_121289581_121298050_121298154_121301302
Isoform_78656_29	chr9	+	2508	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-232	-3550	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	8.71236623678017	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44515956	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_44516043_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_78658_12	chr9	+	2601	15	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-235	-3550	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5742941778013	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAATACCAAG	NA	False	NA	NA	False	NA	NA	NA	44515953	44548478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_44516043_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
Isoform_7866_49	chr11	-	1457	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	40	6	40	-6	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998905	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
Isoform_78662_3	chr9	+	684	2	Antisense	novelGene_ENSMUSG00000092212.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACCTGCTTATGTTCT	658	False	NA	NA	False	NA	NA	NA	119053536	119058311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_+_119053682_119057772
Isoform_78664_7	chr9	+	3158	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	354	303	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230526	114236647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_114230626_114233588
Isoform_78666_3	chr9	+	3197	21	NNC	ENSMUSG00000023259.18	novel	2659	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	10.09405765785	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGCTGTGGCATGG	NA	False	NA	17	True	AATAAA	-17	NA	108731337	108742115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_108732016_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
Isoform_78667_4	chr9	+	1799	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-642	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110782224	110811288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
Isoform_78668_5	chr9	+	692	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	48017	-5	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATCTGCCTTGTTCA	4051	False	NA	NA	False	AATAAA	-15	NA	111316165	111318181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_111316269_111317592
Isoform_78669_3	chr9	+	1315	2	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7117	-5	intron_retention	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTTTGCAGACTTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	76219741	76228123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_76219851_76226917
Isoform_78670_7	chr9	+	2401	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	-23	-1055	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCATGTTGTGTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	85725390	85728038	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_85725457_85725703
Isoform_78671_5	chr9	+	987	3	NNC	ENSMUSG00000111147.2	novel	3468	7	NA	NA	20176	200	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAAATGGTTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	60959669	60966598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_60959709_60960349_60960452_60965752
Isoform_78672_5	chr9	+	1542	2	Intergenic	novelGene_2110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTACTCTTTGACA	1240	False	NA	10	True	NA	NA	NA	111353205	111361780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_111353258_111360290
Isoform_78676_5	chr9	+	705	2	NNC	ENSMUSG00000010607.9	novel	695	2	NA	NA	616	-11	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAAGACTGTTTCTTC	NA	False	NA	33	True	AATAAA	-33	NA	22068857	22069643	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_22068947_22069027
Isoform_78677_3	chr9	+	2498	2	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	33	1	intron_retention	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGGGATTTCTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	78083228	78086162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_+_78083417_78083852
Isoform_7868_26	chr11	-	2192	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	-6	6	3	-6	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001069	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_78681_18	chr9	+	168	1	Intergenic	novelGene_2049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	62233712	62233880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_62233700_62233900
Isoform_78683_4	chr9	+	177	1	Intergenic	novelGene_2050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	62620932	62621109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_62620900_62621100
Isoform_78686_9	chr9	-	214	1	Intergenic	novelGene_2051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTAAAGGACGCCTG	NA	False	NA	NA	False	NA	NA	NA	62760325	62760111	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_62760100_62760300
Isoform_78687_3	chr9	-	179	1	Intergenic	novelGene_2052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62836059	62835880	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_62835900_62836100
Isoform_78688_3	chr9	-	2572	1	NIC	ENSMUSG00000032405.11	novel	2492	14	NA	NA	0	-55405	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAGAATAAA	NA	False	NA	NA	False	NA	NA	NA	62888165	62885593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_62885600_62888200
Isoform_78690_4	chr9	+	2825	1	Antisense	novelGene_ENSMUSG00000032402.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACAGGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	63664764	63667589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_+_63664800_63667600
Isoform_78691_4	chr9	-	201	1	Intergenic	novelGene_2053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAAATTTGACCAAGT	NA	False	NA	NA	False	NA	NA	NA	63720374	63720173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_63720200_63720400
Isoform_78692_3	chr9	+	174	1	Intergenic	novelGene_2054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	64047873	64048047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64047900_64048000
Isoform_78693_4	chr9	+	247	1	Intergenic	novelGene_2055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64065086	64065333	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64065100_64065300
Isoform_78694_6	chr9	-	919	1	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-15	-3897	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64080210	64079291	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_64079300_64080200
Isoform_78697_4	chr9	+	200	1	Intergenic	novelGene_2056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTTAATTCTAATGCT	4237	False	NA	NA	False	NA	NA	NA	64089164	64089364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64089200_64089400
Isoform_78698_74	chr9	+	176	1	Intergenic	novelGene_2057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACTTTTATATGTAT	7802	False	NA	1	True	NA	NA	NA	64187121	64187297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64187100_64187300
Isoform_78699_16	chr9	+	1705	1	NIC	ENSMUSG00000032397.8	novel	352	4	NA	NA	5	-7133	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAACAAAACC	9574	False	NA	NA	False	NA	NA	NA	64188893	64190598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_64188900_64190600
Isoform_787_5	chr10	-	1916	6	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	5.31413210223457	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTTTTTCAGCATAT	5806	False	NA	1	True	AATAAA	-18	NA	39607854	39497407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39557468_39557546_39607733
Isoform_78701_11	chr9	+	215	1	Intergenic	novelGene_2058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCACAGCTGGGAAGTAT	NA	False	NA	NA	False	AAAAAG	-18	NA	64223921	64224136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64223900_64224100
Isoform_78702_5	chr9	+	195	1	Intergenic	novelGene_2059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	64617796	64617991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_64617800_64618000
Isoform_78703_4	chr9	-	172	1	Intergenic	novelGene_2002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	18983269	18983097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_18983100_18983300
Isoform_78704_3	chr9	+	517	1	Intergenic	novelGene_2003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	19004933	19005450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_19004900_19005400
Isoform_78705_4	chr9	-	908	1	FSM	ENSMUSG00000119286.1	ENSMUST00000101817.3	116	1	0	-792	0	792	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAAAGTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65109123	65108215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_65108200_65109100
Isoform_78706_46	chr9	-	197	1	Intergenic	novelGene_2060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGTTCAAGATCAAGG	NA	False	NA	NA	False	NA	NA	NA	65283370	65283173	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_65283200_65283400
Isoform_78707_17	chr9	+	177	1	Intergenic	novelGene_2061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAACGAGTT	NA	False	NA	NA	False	NA	NA	NA	65481464	65481641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_65481500_65481600
Isoform_78708_3	chr9	+	3566	1	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	0	278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	65494486	65498052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_65494500_65498100
Isoform_78709_13	chr9	-	176	1	Intergenic	novelGene_2062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATTGAAGTAATAG	3970	False	NA	NA	False	NA	NA	NA	65532185	65532009	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_65532000_65532200
Isoform_78710_17	chr9	+	178	1	Intergenic	novelGene_2063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65716774	65716952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_65716800_65717000
Isoform_78711_6	chr9	-	174	1	Intergenic	novelGene_2065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	65803388	65803214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_65803200_65803400
Isoform_78713_4	chr5	-	176	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	31902805	31902629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_31902600_31902800
Isoform_78714_11	chr9	-	910	1	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	2	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	AATACA	-8	NA	20432711	20431801	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_20431800_20432700
Isoform_78715_5	chr9	-	228	1	Intergenic	novelGene_2066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATTCATTCTGTCAAA	NA	False	NA	NA	False	NA	NA	NA	66439944	66439716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_66439700_66439900
Isoform_78716_14	chr9	+	180	1	Intergenic	novelGene_2067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	66637245	66637425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_66637200_66637400
Isoform_78719_9	chr9	-	2198	1	NIC	ENSMUSG00000032366.16	novel	2890	8	NA	NA	-20	-7952	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66951209	66949011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_66949000_66951200
Isoform_7872_4	chr11	-	1292	3	ISM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	279	-634	-16	-6	3prime_fragment	FALSE	canonical	3	54	junction_2	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998582	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_115997468_115997757_115997833_115998249
Isoform_78720_4	chr9	-	2501	1	ISM	ENSMUSG00000052698.16	ENSMUST00000040025.14	12132	58	340108	8	11812	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGAACTTGTGTGAA	NA	False	NA	NA	False	AATAAA	-7	NA	67126877	67124376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_67124400_67126900
Isoform_78721_4	chr9	-	3138	1	Intergenic	novelGene_2068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	67541316	67538178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_67538200_67541300
Isoform_78723_3	chr9	+	172	1	Intergenic	novelGene_2069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTTAAAAGA	2326	False	NA	2	True	NA	NA	NA	70323955	70324127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_70324000_70324100
Isoform_78725_5	chr9	+	2113	1	FSM	ENSMUSG00000096160.3	ENSMUST00000179930.3	840	1	-225	-1048	-225	1048	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5458	False	NA	NA	False	AATAAA	-13	NA	70759632	70761745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_70759600_70761700
Isoform_78728_4	chr9	+	177	1	Intergenic	novelGene_2070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATTAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	72184764	72184941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_72184800_72184900
Isoform_78729_5	chr9	-	179	1	Intergenic	novelGene_2071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72574082	72573903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_72573900_72574100
Isoform_7873_26	chr11	-	1460	4	FSM	ENSMUSG00000020773.12	ENSMUST00000134691.2	782	4	-44	-634	40	-6	multi-exon	FALSE	canonical	3	54	junction_2	44.1437047229462	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115998905	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603
Isoform_78730_7	chr9	+	170	1	FSM	ENSMUSG00000102411.2	ENSMUST00000194508.2	2749	1	1409	1170	1409	-1170	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	72636830	72637000	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_72636800_72637000
Isoform_78741_3	chr9	-	185	1	Intergenic	novelGene_2072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTTTTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	72680629	72680444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_72680400_72680600
Isoform_78742_6	chr9	-	210	1	Intergenic	novelGene_2073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGAAAGAAAGGTTGGT	4120	False	NA	NA	False	NA	NA	NA	72686925	72686715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_72686700_72686900
Isoform_78743_4	chr9	-	166	1	Intergenic	novelGene_2074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTGTAAAACTC	NA	False	NA	NA	False	NA	NA	NA	72731751	72731585	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_72731600_72731800
Isoform_78749_16	chr9	+	784	1	NIC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	12	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74944972	74945756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_74945000_74945800
Isoform_7875_3	chr11	-	2308	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	-110	6	-110	-6	multi-exon	FALSE	canonical	3	54	junction_2	42.4951761968344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001182	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_78752_5	chr9	-	178	1	Intergenic	novelGene_2076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75354296	75354118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_75354100_75354300
Isoform_78755_3	chr9	-	238	1	Intergenic	novelGene_2077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTACTTATATGTG	NA	False	NA	NA	False	NA	NA	NA	75443713	75443475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_75443500_75443700
Isoform_78757_63	chr9	-	2843	1	Intergenic	novelGene_2078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATAAAAAAGAGAGAAA	182	False	NA	NA	False	NA	NA	NA	75643047	75640204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_75640200_75643000
Isoform_7876_32	chr11	-	2198	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	0	6	0	-6	multi-exon	FALSE	canonical	3	54	junction_2	42.4951761968344	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGATTCCCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	116001072	115996583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
Isoform_78764_3	chr9	+	1751	1	Genic_Genomic	ENSMUSG00000032350.10	novel	NA	NA	NA	NA	-3	-23263	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACGCTC	4417	False	NA	NA	False	NA	NA	NA	77661813	77663564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_77661800_77663600
Isoform_78766_6	chr9	+	2913	1	NIC	ENSMUSG00000009828.16	novel	735	2	NA	NA	1	-2256	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78020582	78023495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_78020600_78023500
Isoform_78767_5	chr9	-	323	1	FSM	ENSMUSG00002076161.1	ENSMUST00020183253.1	331	1	1	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTAGTTCCTGCA	NA	False	NA	-8	True	NA	NA	NA	78082914	78082591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78082600_78082900
Isoform_78769_9	chr9	+	393	2	Intergenic	novelGene_2080	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATTAAAATGTGCGTCG	NA	False	NA	NA	False	AATAAA	-13	NA	78153656	78180317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78153865_78180132
Isoform_78770_8	chr9	+	233	1	Intergenic	novelGene_2081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	4151	False	NA	NA	False	AATAAA	-21	NA	78180092	78180325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78180100_78180300
Isoform_78772_9	chr9	+	240	1	Intergenic	novelGene_2079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCGTCGTCATTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	78153639	78153879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78153600_78153900
Isoform_78776_3	chr9	+	168	1	Intergenic	novelGene_2082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGTTTTCGAGACA	NA	False	NA	3	True	NA	NA	NA	78279009	78279177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78279000_78279200
Isoform_78777_11	chr9	+	2567	1	Genic_Genomic	ENSMUSG00000070291.5	novel	NA	NA	NA	NA	-3	-25247	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTATT	9039	False	NA	NA	False	TTTAAA	-6	NA	78303055	78305622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_78303100_78305600
Isoform_78779_9	chr9	+	2252	1	NIC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	0	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78355494	78357746	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_78355500_78357700
Isoform_78780_3	chr9	+	170	1	Intergenic	novelGene_2083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAAATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	78383422	78383592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78383400_78383600
Isoform_78786_4	chr9	+	203	1	Intergenic	novelGene_2084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATTGGCCAAACTTGG	1793	False	NA	NA	False	NA	NA	NA	78397667	78397870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78397700_78397900
Isoform_78788_3	chr10	-	176	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56099835	56099659	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_-_56099700_56099800
Isoform_78789_6	chr9	+	214	1	Intergenic	novelGene_2085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTAG	6317	False	NA	NA	False	NA	NA	NA	78527045	78527259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_78527000_78527300
Isoform_7879_156	chr11	-	1410	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	-3	4	-3	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	404	False	NA	-6	True	AATAAA	-16	NA	116029697	116022646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
Isoform_78790_26	chr9	-	1944	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-77	-666	-77	666	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTCGAATTAGAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	78729197	78727253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_78727300_78729200
Isoform_78795_3	chr9	+	1791	1	NIC	ENSMUSG00000034252.15	novel	1916	5	NA	NA	-11	-18746	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	79974243	79976034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_79974200_79976000
Isoform_78797_6	chr9	-	272	1	Intergenic	novelGene_2086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	79993977	79993705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_79993700_79994000
Isoform_788_7	chr10	-	3520	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	1	7	1	-7	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGACTGTTGACTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	39775233	39766015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
Isoform_7880_806	chr11	-	1345	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	62	4	-17	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	469	False	NA	-6	True	AATAAA	-16	NA	116029632	116022646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
Isoform_78804_3	chr9	+	651	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	409	-285	409	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81560073	81560724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_81560100_81560700
Isoform_78806_5	chr9	-	197	1	Intergenic	novelGene_2087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAATAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81974911	81974714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_81974700_81974900
Isoform_78810_3	chr9	+	1269	1	NIC	ENSMUSG00000038379.16	novel	2711	21	NA	NA	6	-1571	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	83716748	83718017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_83716700_83718000
Isoform_78811_2490	chr9	+	864	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-26	-40	-26	40	mono-exon	FALSE	NA	NA	NA	NA	NA	2490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-11	NA	84306010	84306874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_84306000_84306900
Isoform_78814_3	chr7	-	637	1	FSM	ENSMUSG00000062758.7	ENSMUST00000085365.6	801	1	201	-37	201	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAAAAAAATCGCC	NA	False	NA	NA	False	CATAAA	-11	NA	131216516	131215879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_-_131215900_131216500
Isoform_78819_1756	chr9	+	550	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	-34	-35	-34	35	mono-exon	FALSE	NA	NA	NA	NA	NA	1756	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88272855	88273405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_88272900_88273400
Isoform_78824_9	chr9	-	423	1	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	9	-17419	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	21003295	21002872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_21002900_21003300
Isoform_78827_3	chr9	+	243	1	Intergenic	novelGene_2088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTCATGATTCTAGA	NA	False	NA	NA	False	NA	NA	NA	88471955	88472198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_88472000_88472200
Isoform_78828_10	chr9	+	2223	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-51	-1301	-51	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATTTTCA	NA	False	NA	NA	False	AATACA	-17	NA	90000938	90003161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_90000900_90003200
Isoform_78829_8	chr9	-	178	1	Intergenic	novelGene_2089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTACTTGGA	NA	False	NA	NA	False	NA	NA	NA	90050294	90050116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_90050100_90050300
Isoform_78830_13	chr9	+	2346	1	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-109	-19397	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAGAAAAGAA	NA	False	NA	NA	False	GGGGCT	-18	NA	92132285	92134631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_92132300_92134600
Isoform_78832_11	chr9	-	2998	1	FSM	ENSMUSG00000032407.15	ENSMUST00000188017.2	2846	1	-6	-146	0	146	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAACAGAAACAAAAA	8302	False	NA	NA	False	NA	NA	NA	95393938	95390940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_95390900_95393900
Isoform_78833_10	chr9	+	2124	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	273	5970	273	-5970	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGTCCTCAAACGT	NA	False	NA	NA	False	AATAAA	-24	NA	95441982	95444106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_95442000_95444100
Isoform_78837_3	chr9	+	2638	1	NIC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	1	-10339	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95836846	95839484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_95836800_95839500
Isoform_78838_8	chr9	+	174	1	Intergenic	novelGene_2004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTGCAC	NA	False	NA	13	True	NA	NA	NA	21071063	21071237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_21071100_21071200
Isoform_78839_7	chr9	-	222	1	Intergenic	novelGene_2090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGCCCTACAGTTTAA	NA	False	NA	NA	False	AAAAAG	-20	NA	95896663	95896441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_95896400_95896700
Isoform_7884_14	chr11	-	1815	7	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	763	junction_6	34.4722110305291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCCAATATGTCTTCAC	472	False	NA	-9	True	AATAAA	-13	NA	116029629	116022649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116026152_116029267_116029448_116029536
Isoform_78841_6	chr9	-	713	1	Intergenic	novelGene_2091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGACCACTCTTTTG	NA	False	NA	NA	False	AAAAAG	-40	NA	96412517	96411804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_96411800_96412500
Isoform_78853_5	chr9	-	177	1	Intergenic	novelGene_2005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	8166	False	NA	NA	False	NA	NA	NA	21134917	21134740	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_21134700_21134900
Isoform_78854_3	chr9	-	178	1	Intergenic	novelGene_2093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97032877	97032699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_97032700_97032900
Isoform_78856_12	chr9	+	177	1	Intergenic	novelGene_2094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGACCTA	NA	False	NA	NA	False	NA	NA	NA	98326050	98326227	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_98326000_98326200
Isoform_78858_4	chr9	+	1306	1	FSM	ENSMUSG00000091080.3	ENSMUST00000170349.3	883	1	-117	-306	-117	306	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTTGCTGTCTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	98724438	98725744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98724400_98725700
Isoform_78859_4	chr9	+	1229	1	FSM	ENSMUSG00000091080.3	ENSMUST00000170349.3	883	1	-40	-306	-40	306	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTTGCTGTCTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	98724515	98725744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98724500_98725700
Isoform_78860_18	chr9	+	1830	1	FSM	ENSMUSG00000090470.3	ENSMUST00000167951.3	1817	1	-17	4	-17	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGTGAGTCAAAAATCA	NA	False	NA	2	True	AATAAA	-15	NA	98746802	98748632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_98746800_98748600
Isoform_78864_3	chr9	-	4231	1	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	220	-39475	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	3914	False	NA	NA	False	NA	NA	NA	99318759	99314528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99314500_99318800
Isoform_78865_6	chr9	-	858	1	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-7	-16457	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAACAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	99450709	99449851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_99449900_99450700
Isoform_78866_5	chr9	-	1103	1	Genic_Genomic	ENSMUSG00000032468.12	novel	NA	NA	NA	NA	-2	-16457	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAACAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	99450954	99449851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_-_99449900_99451000
Isoform_78867_4	chr9	-	201	1	Intergenic	novelGene_2006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTTTTTTAGTGAATC	NA	False	NA	NA	False	NA	NA	NA	21175588	21175387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_21175400_21175600
Isoform_78868_6	chr9	+	175	1	Intergenic	novelGene_2095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	102677031	102677206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_102677000_102677200
Isoform_78869_3	chr9	-	188	1	Intergenic	novelGene_2096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGTCAGCTCCTATAAA	NA	False	NA	NA	False	NA	NA	NA	102983120	102982932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_102982900_102983100
Isoform_7887_22	chr11	-	3718	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	267	2	23	-2	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	NA	False	NA	-1	True	AATAAA	-13	NA	116089604	116062715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_78870_3	chr9	-	1825	1	NIC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	-1	-9905	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103079329	103077504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_103077500_103079300
Isoform_78871_5	chr9	+	379	1	Intergenic	novelGene_2097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	103077975	103078354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_103078000_103078400
Isoform_78872_9	chr9	+	781	1	FSM	ENSMUSG00000032555.11	ENSMUST00000189631.2	769	1	-31	19	-15	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACTAAAAAAAAAAAAAAA	938	False	NA	NA	False	NA	NA	NA	103182398	103183179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_103182400_103183200
Isoform_7888_22	chr11	-	3746	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	241	0	-3	0	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089630	116062713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_78883_3	chr9	+	1129	1	Genic_Genomic	ENSMUSG00000086236.10	novel	NA	NA	NA	NA	-745	-19854	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATTCTCGGCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	103300031	103301160	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_103300000_103301200
Isoform_78885_10	chr9	-	1155	1	NIC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	6	-24827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATAAA	-41	NA	105372287	105371132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_105371100_105372300
Isoform_78886_4	chr9	+	2099	1	FSM	ENSMUSG00000020257.14	ENSMUST00000191147.2	3045	1	-39	985	-38	-985	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTTATTCAGGCA	NA	False	NA	NA	False	AATAAA	-14	NA	106048088	106050187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_106048100_106050200
Isoform_78889_4	chr9	-	176	1	Intergenic	novelGene_2098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAACATTG	6046	False	NA	NA	False	NA	NA	NA	106121045	106120869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_106120900_106121000
Isoform_7889_14	chr11	-	4019	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-35	3	-35	-3	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTTGGCTGTTACGTGT	NA	False	NA	-2	True	AATAAA	-12	NA	116089906	116062716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_78890_5	chr18	-	192	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTCGCTTCACTTCC	NA	False	NA	NA	False	NA	NA	NA	49641575	49641383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr18_-_49641400_49641600
Isoform_78892_3	chr9	-	944	1	Genic_Genomic	ENSMUSG00000040661.7	novel	NA	NA	NA	NA	4281	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTTGGTCAAGAAATT	4771	False	NA	-1	True	AATAAA	-12	NA	106566223	106565279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_-_106565300_106566200
Isoform_78895_4	chr9	-	3240	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	262	3009	262	824	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATGCCGTATGTCATGT	NA	False	NA	49	True	NA	NA	NA	106764365	106761125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106761100_106764400
Isoform_78896_9	chr9	-	3157	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	345	3009	345	824	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATGCCGTATGTCATGT	NA	False	NA	49	True	NA	NA	NA	106764282	106761125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106761100_106764300
Isoform_78897_79	chr9	-	3082	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	363	3066	363	767	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCAGAGTCCTGGTTTA	NA	False	NA	-8	True	AGTAAA	-28	NA	106764264	106761182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106761200_106764300
Isoform_789_13	chr10	-	2457	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	0	2940	0	827	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAGATATCCTGGCAA	7143	False	NA	NA	False	AATAAA	-14	NA	40018250	39912467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
Isoform_78900_24	chr9	-	3174	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	272	3065	272	768	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCAGAGTCCTGGTTTAA	NA	False	NA	-7	True	AGTAAA	-29	NA	106764355	106761181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_106761200_106764400
Isoform_78903_4	chr9	-	178	1	Intergenic	novelGene_2099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGTATTGCA	NA	False	NA	NA	False	NA	NA	NA	106794446	106794268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_106794300_106794400
Isoform_78904_5	chr1	+	176	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181682701	181682877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr1_+_181682700_181682900
Isoform_78905_4	chr9	-	3205	1	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	107215549	107212344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_107212300_107215500
Isoform_78906_5	chr9	+	833	1	NIC	ENSMUSG00000010067.14	novel	1727	5	NA	NA	114	1023	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	107431895	107432728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_107431900_107432700
Isoform_78907_5	chr9	+	998	1	FSM	ENSMUSG00000010051.16	ENSMUST00000184695.2	2078	1	1081	-1	1081	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	107457876	107458874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_107457900_107458900
Isoform_78912_5	chr9	-	2758	1	FSM	ENSMUSG00000032580.13	ENSMUST00000181993.2	1775	1	-42	-941	-5	941	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAAGGAAAAGGA	9700	False	NA	NA	False	NA	NA	NA	107648200	107645442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_107645400_107648200
Isoform_78914_15	chr9	+	914	1	Genic_Genomic	ENSMUSG00000002825.9	novel	NA	NA	NA	NA	-2	307	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	2367	False	NA	NA	False	NA	NA	NA	21323130	21324044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_21323100_21324000
Isoform_78916_12	chr9	+	201	1	Intergenic	novelGene_2100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATCTGTGGCAATAC	NA	False	NA	NA	False	NA	NA	NA	108129596	108129797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_108129600_108129800
Isoform_78917_8	chr9	-	301	1	Intergenic	novelGene_2101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATGAGAAAGAAGAAAAG	8296	False	NA	NA	False	NA	NA	NA	108131157	108130856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_108130900_108131200
Isoform_78918_9	chr9	+	237	1	Intergenic	novelGene_2102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTCTTGTTTCCTT	NA	False	NA	NA	False	AAAAAG	-36	NA	108133063	108133300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_108133100_108133300
Isoform_78921_3	chr9	-	182	1	Intergenic	novelGene_2007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAATA	NA	False	NA	NA	False	NA	NA	NA	21325091	21324909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_21324900_21325100
Isoform_78923_5	chr9	-	689	1	NIC	ENSMUSG00000104208.2	novel	347	2	NA	NA	340	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTGGCAATGGAGTCT	NA	False	NA	NA	False	NA	NA	NA	108215132	108214443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_108214400_108215100
Isoform_78931_5	chr9	+	634	1	NIC	ENSMUSG00000049305.7	novel	3092	2	NA	NA	9	-2090	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAATAAATAAATAA	204	False	NA	NA	False	NA	NA	NA	108337742	108338376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108337700_108338400
Isoform_78934_9	chr9	+	197	1	Intergenic	novelGene_2103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGACTGGGGATTAGC	5659	False	NA	NA	False	NA	NA	NA	108575614	108575811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_108575600_108575800
Isoform_78937_5	chr9	+	358	1	Intergenic	novelGene_2104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	108903253	108903611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_108903300_108903600
Isoform_78938_8	chr9	+	520	1	NIC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	0	-9477	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	108911560	108912080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_108911600_108912100
Isoform_78939_3	chr9	-	2550	1	FSM	ENSMUSG00000070282.7	ENSMUST00000133495.3	1008	1	-1330	-212	-5	14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAACAAACAAACAA	NA	False	NA	NA	False	AATAAA	-28	NA	109661779	109659229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_109659200_109661800
Isoform_78940_15	chr12	+	178	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	117486947	117487125	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_117486900_117487100
Isoform_78941_6	chr14	+	196	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACTCATATTTGATAT	NA	False	NA	NA	False	NA	NA	NA	14295699	14295895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr14_+_14295700_14295900
Isoform_78942_12	chr9	-	193	1	Intergenic	novelGene_1997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTCTACAATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	3332703	3332510	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_3332500_3332700
Isoform_78944_27	chr6	+	173	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTGTTAGAT	NA	False	NA	NA	False	NA	NA	NA	137640402	137640575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr6_+_137640400_137640600
Isoform_7895_8	chr11	-	3718	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	26	-1	26	1	multi-exon	TRUE	canonical	2	9	junction_11	29.8427833148373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTTACGTGTAGAC	NA	False	NA	2	True	AATAAA	-16	NA	116089601	116062712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_78950_3	chr9	+	197	1	Intergenic	novelGene_2108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	110160215	110160412	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_110160200_110160400
Isoform_78951_3	chr9	-	1187	1	NIC	ENSMUSG00000054792.16	novel	4530	10	NA	NA	-26	-38068	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2036	False	NA	NA	False	NA	NA	NA	110305684	110304497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_110304500_110305700
Isoform_78959_6	chr9	+	3896	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-127	3380	-111	-1828	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTGTGAATATGGGG	NA	False	NA	NA	False	NA	NA	NA	111100885	111104781	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_111100900_111104800
Isoform_7896_3	chr11	-	3245	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	-274	772	-30	-772	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGAAAGATTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	116089901	116063485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
Isoform_78960_11	chr9	+	3718	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-89	3520	-73	-1968	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGAGAGAATGATT	NA	False	NA	NA	False	AATAAA	-16	NA	111100923	111104641	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_111100900_111104600
Isoform_78962_29	chr9	-	1673	1	Intergenic	novelGene_2109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111352325	111350652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_111350700_111352300
Isoform_78963_3	chr9	-	173	1	Intergenic	novelGene_2111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTTAAAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	113564442	113564269	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_113564300_113564400
Isoform_78965_44	chr9	-	961	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	47	56229	47	-56229	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAACACAAG	NA	False	NA	NA	False	NA	NA	NA	114393390	114392429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_114392400_114393400
Isoform_78966_4	chr9	-	392	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	23	56822	23	-56822	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATGTGATCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	114393414	114393022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_114393000_114393400
Isoform_78969_5	chr9	+	1169	1	Genic_Genomic	ENSMUSG00000052724.8	novel	NA	NA	NA	NA	990	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCACCATTCTGCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	114610157	114611326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_114610200_114611300
Isoform_7897_3	chr11	-	1912	9	ISM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-30	5989	-30	1843	5prime_fragment	FALSE	canonical	3	53	junction_7	16.7663166795811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAATTACAATTCGAA	NA	False	NA	NA	False	NA	NA	NA	116089901	116068702	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
Isoform_78970_5	chr9	+	1144	1	NIC	ENSMUSG00000052724.8	novel	965	3	NA	NA	1014	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCCACCATTCTGCTT	NA	False	NA	NA	False	AATAAA	-34	NA	114610181	114611325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_114610200_114611300
Isoform_78974_9	chr9	-	340	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	34	0	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	7274	False	NA	NA	False	AATAAA	-14	NA	114811807	114811467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_114811500_114811800
Isoform_78977_183	chr9	-	524	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	-5	-47	-5	47	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTG	NA	False	NA	-16	True	AATAAA	-19	NA	115870137	115869613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_115869600_115870100
Isoform_7898_722	chr11	-	2424	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	102	0	20	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9919	False	NA	-2	True	ATTAAA	-17	NA	116164941	116135991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
Isoform_78980_4	chr9	+	177	1	Intergenic	novelGene_2112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTCATTA	1263	False	NA	NA	False	NA	NA	NA	119103759	119103936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_119103800_119103900
Isoform_78981_4	chr9	+	1985	1	Antisense	novelGene_ENSMUSG00000036737.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	119150807	119152792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_+_119150800_119152800
Isoform_78983_14	chr9	+	2028	1	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	11	-12895	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1900	False	NA	NA	False	NA	NA	NA	21634905	21636933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_21634900_21636900
Isoform_78985_4	chr9	-	240	1	Intergenic	novelGene_2113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCAATCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	119832912	119832672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_119832700_119832900
Isoform_78986_7	chr8	+	186	1	Intergenic	novelGene_1975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGTAAATGCCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112610706	112610892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_112610700_112610900
Isoform_78988_13	chr9	-	2073	1	Intergenic	novelGene_2114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	120400464	120398391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_120398400_120400500
Isoform_78992_3	chr9	-	179	1	Intergenic	novelGene_2115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120451260	120451081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_120451100_120451300
Isoform_78994_6	chr9	-	441	1	ISM	ENSMUSG00000040936.16	ENSMUST00000213408.2	759	2	2	4714	2	203	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTACAGATATTAAAACAA	2208	False	NA	NA	False	AATAAA	-19	NA	120789571	120789130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_-_120789100_120789600
Isoform_78995_7	chr8	+	184	1	Intergenic	novelGene_1955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTATAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	107650516	107650700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr8_+_107650500_107650700
Isoform_78996_12	chr9	+	176	1	Intergenic	novelGene_2116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121198165	121198341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_121198200_121198300
Isoform_790_3	chr10	-	5409	6	NNC	ENSMUSG00000019838.12	novel	5397	6	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.98498591107085	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTTGTGATTGTGTTTC	7129	False	NA	NA	False	AATAAA	-21	NA	40018264	39909528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956803_40017698
Isoform_79001_11	chr9	-	286	1	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	8	-3896	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122695042	122694756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_122694800_122695000
Isoform_79002_3	chr9	+	875	1	FSM	ENSMUSG00000036768.7	ENSMUST00000216730.2	882	1	8	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AAAAAG	-40	NA	122780154	122781029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_122780200_122781000
Isoform_79003_6	chr9	-	833	1	FSM	ENSMUSG00000110945.2	ENSMUST00000217077.2	2578	1	-12	1757	-12	-1757	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTGAAAAAACAACC	8749	False	NA	NA	False	NA	NA	NA	122850649	122849816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_122849800_122850600
Isoform_79005_22	chr9	-	1708	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGTATGTTTCCTTT	NA	False	NA	-1	True	AATACA	-15	NA	123089829	123088121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_123088100_123089800
Isoform_79011_3	chr9	+	655	1	NIC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	31	-22310	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAGACA	NA	False	NA	NA	False	NA	NA	NA	123358854	123359509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_123358900_123359500
Isoform_79012_3	chr9	-	1119	2	NNC	ENSMUSG00000025241.17	novel	1179	4	NA	NA	0	-12103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	9323	False	NA	NA	False	NA	NA	NA	123680951	123679812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr9_-_123680412_123680431
Isoform_79013_3	chr9	-	879	1	Genic_Genomic	ENSMUSG00000110834.2	novel	NA	NA	NA	NA	-47	-10950	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	124044816	124043937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_-_124043900_124044800
Isoform_79014_5	chr9	-	1249	1	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124196749	124195500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_124195500_124196700
Isoform_79015_1789	chr9	+	652	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-51	-121	-51	121	mono-exon	FALSE	NA	NA	NA	NA	NA	1789	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	-1	True	NA	NA	False	AATAAA	-18	NA	7751674	7752326	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_7751700_7752300
Isoform_79023_3	chr9	-	1284	1	Genic_Genomic	ENSMUSG00000038895.17	novel	NA	NA	NA	NA	6597	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	21975975	21974691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_-_21974700_21976000
Isoform_79024_5	chr9	+	1453	1	NIC	ENSMUSG00000010607.9	novel	695	2	NA	NA	-45	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTTTCTTCTAAGAT	NA	False	NA	39	True	AATAAA	-39	NA	22068196	22069649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_22068200_22069600
Isoform_79026_3111	chr9	-	701	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-35	-51	-35	51	mono-exon	FALSE	NA	NA	NA	NA	NA	3111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	22097552	22096851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22096900_22097600
Isoform_79028_3	chr9	-	168	1	Intergenic	novelGene_2008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAAGAC	3726	False	NA	NA	False	NA	NA	NA	22182533	22182365	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_22182400_22182500
Isoform_79029_48	chr9	-	1070	1	FSM	ENSMUSG00000094627.3	ENSMUST00000178676.3	273	1	3	-800	3	800	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACACTAAAGC	7421	False	NA	NA	False	AATAAA	-23	NA	22232670	22231600	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_22231600_22232700
Isoform_7903_11	chr11	-	2254	20	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	4	6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	70.0554983793963	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGGGTGAGTGTGAAGTC	8931	False	NA	0	True	CATAAA	-21	NA	116197549	116179928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_79032_3	chr9	-	1392	1	Intergenic	novelGene_2009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATTATATTGTATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25163705	25162313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_25162300_25163700
Isoform_79033_3	chr9	-	197	1	Intergenic	novelGene_2010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATATCAA	NA	False	NA	NA	False	NA	NA	NA	25574982	25574785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_25574800_25575000
Isoform_79034_9	chr9	+	2938	1	NIC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	83	-18284	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26942027	26944965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_26942000_26945000
Isoform_79035_6	chr9	-	196	1	Intergenic	novelGene_2011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCCTTTTCCATCCTC	NA	False	NA	NA	False	NA	NA	NA	27050645	27050449	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_27050400_27050600
Isoform_79038_3	chr9	+	3323	1	Genic_Genomic	ENSMUSG00000031994.14	novel	NA	NA	NA	NA	-11	-16983	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACGTAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	30853846	30857169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_30853800_30857200
Isoform_7904_4	chr11	-	2189	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	5	1104	-2	4	multi-exon	FALSE	canonical	2	10	junction_12	61.2926847990569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCGGGTGAGTGTGAAG	8925	False	NA	-2	True	CATAAA	-19	NA	116197555	116179930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_79045_1491	chr9	+	1985	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-88	-1293	-88	1293	mono-exon	FALSE	NA	NA	NA	NA	NA	1491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAGTAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	33639454	33641439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_33639500_33641400
Isoform_79048_5	chr9	+	1371	1	NIC	ENSMUSG00000032103.11	novel	2144	4	NA	NA	21	-5982	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-14	NA	35470782	35472153	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_35470800_35472200
Isoform_79049_3	chr9	+	410	1	Antisense	novelGene_ENSMUSG00000032113.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36638012	36638422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_+_36638000_36638400
Isoform_7905_83	chr11	-	2087	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	1111	0	-3	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCGAGCCGGGTGAG	8927	False	NA	-9	True	CATAAA	-12	NA	116197553	116179937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_79051_16	chr9	-	213	1	Intergenic	novelGene_2013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAACAAAA	6725	False	NA	NA	False	NA	NA	NA	36724337	36724124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_36724100_36724300
Isoform_79052_47	chr9	+	322	1	FSM	ENSMUSG00000090136.5	ENSMUST00000161698.2	207	1	-49	-66	4	66	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTGTGGTGTTTTGTT	NA	False	NA	NA	False	AGTAAA	-12	NA	37164221	37164543	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_37164200_37164500
Isoform_79055_4	chr9	-	178	1	Intergenic	novelGene_2014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTACCTG	NA	False	NA	NA	False	NA	NA	NA	37379649	37379471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_37379500_37379600
Isoform_79056_3	chr9	+	280	1	Intergenic	novelGene_2015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37397367	37397647	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_37397400_37397600
Isoform_79057_4	chr9	+	176	1	ISM	ENSMUSG00000096356.4	ENSMUST00000217286.2	5673	2	2431	3441	1937	1077	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38028924	38029100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_38028900_38029100
Isoform_79058_3	chr9	+	175	1	Intergenic	novelGene_2016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	39427904	39428079	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_39427900_39428100
Isoform_79059_3	chr9	+	177	1	Intergenic	novelGene_2017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAGGAA	2530	False	NA	NA	False	NA	NA	NA	40150690	40150867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_40150700_40150900
Isoform_7906_13	chr11	-	2311	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	887	0	175	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTCTGCTTTCATCCC	8927	False	NA	1	True	NA	NA	NA	116197553	116179713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_79060_3	chr9	-	3146	1	Genic_Genomic	ENSMUSG00000049313.9	novel	NA	NA	NA	NA	6723	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGAGCAGCAGCCGATT	NA	False	NA	-10	True	AATAAA	-17	NA	41879160	41876014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_-_41876000_41879200
Isoform_79061_7	chr9	+	172	1	Intergenic	novelGene_1998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12550497	12550669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_12550500_12550700
Isoform_79063_3	chr9	-	611	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-301	2913	-301	-2913	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAATAAGGAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	13246135	13245524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_13245500_13246100
Isoform_79064_5	chr9	+	246	1	Intergenic	novelGene_2018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATACTTTTTGCACT	NA	False	NA	NA	False	NA	NA	NA	42997466	42997712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_42997500_42997700
Isoform_79066_9	chr9	-	203	1	Intergenic	novelGene_2019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAGCAAATTC	NA	False	NA	NA	False	NA	NA	NA	43033408	43033205	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_43033200_43033400
Isoform_79067_3	chr9	+	2775	1	NIC	ENSMUSG00000032010.16	novel	3867	13	NA	NA	2	-6076	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43978376	43981151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_43978400_43981200
Isoform_79068_4	chr9	+	1979	1	NIC	ENSMUSG00000032010.16	novel	2057	12	NA	NA	1	-5571	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAGAAAAGAAAAAAA	2260	False	NA	NA	False	NA	NA	NA	43996247	43998226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_43996200_43998200
Isoform_79069_1118	chr9	-	2719	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCCTTGGGAGTGG	9266	False	NA	NA	False	AATAAA	-19	NA	44024797	44022078	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44022100_44024800
Isoform_7907_5	chr11	-	3198	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	0	0	0	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTCCTCTGGTGGTG	8927	False	NA	NA	False	ATTAAA	-19	NA	116197553	116178826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
Isoform_79071_3	chr9	+	214	1	Genic_Genomic	ENSMUSG00000097467.3	novel	NA	NA	NA	NA	3629	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTCTTTTTAAAAA	801	False	NA	NA	False	NA	NA	NA	44033047	44033261	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_44033000_44033300
Isoform_79074_5	chr9	-	175	1	Intergenic	novelGene_2022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	44208275	44208100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_44208100_44208300
Isoform_79077_11158	chr9	+	1382	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-3	5	-3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGTTTAATGTTGA	5250	False	NA	29	True	ATTAAA	-25	NA	44245987	44247369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44246000_44247400
Isoform_7908_3	chr11	-	2622	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	29	1968	29	18	multi-exon	TRUE	canonical	3	28	junction_1	6.47335469348423	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAACTGGTTGGGAAC	3378	False	NA	NA	False	CATAAA	-14	NA	116303801	116229146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
Isoform_79090_14	chr9	-	612	1	FSM	ENSMUSG00000060467.5	ENSMUST00000075585.5	438	1	-57	-117	-57	117	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACCAAATAAAATTTGCT	2033	False	NA	NA	False	NA	NA	NA	44286535	44285923	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44285900_44286500
Isoform_79092_8	chr9	+	166	1	Intergenic	novelGene_2023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTTAAAAAAGGAACAG	NA	False	NA	NA	False	NA	NA	NA	44288888	44289054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_44288900_44289100
Isoform_79093_3	chr9	-	431	1	Antisense	novelGene_ENSMUSG00000031918.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAATTACAATGTCAGC	NA	False	NA	NA	False	NA	NA	NA	13717775	13717344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_13717300_13717800
Isoform_79094_3	chr9	-	799	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	20	-1	20	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGTATTCATGTGA	NA	False	NA	NA	False	NA	NA	NA	44290727	44289928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44289900_44290700
Isoform_79095_4	chr9	-	664	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	149	5	149	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATGAGTATTC	NA	False	NA	NA	False	NA	NA	NA	44290598	44289934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_44289900_44290600
Isoform_79096_3	chr9	+	178	1	Intergenic	novelGene_2024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	6725	False	NA	NA	False	NA	NA	NA	44343019	44343197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_44343000_44343200
Isoform_79097_10	chr9	+	489	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-81	-51	-81	51	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGCTTGTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	44375458	44375947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44375500_44375900
Isoform_79099_5	chr9	+	744	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-81	-306	-81	306	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGGCTTTTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	44375458	44376202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_44375500_44376200
Isoform_791_6	chr10	-	1946	3	FSM	ENSMUSG00000019838.12	ENSMUST00000213488.2	2325	3	1	378	0	-378	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTACTCAAAGGTGTTC	7143	False	NA	NA	False	AATAAA	-27	NA	40018250	39951764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_39953014_39956658_39956804_40017698
Isoform_7910_1193	chr11	-	1830	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	5	6	5	-6	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGTCGGCTGCTGAGC	NA	False	NA	-13	True	AATAAA	-21	NA	116381169	116361676	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_79103_3	chr9	-	191	1	Intergenic	novelGene_2025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTCAAAATAAGACCATCT	3643	False	NA	NA	False	NA	NA	NA	44522866	44522675	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_44522700_44522900
Isoform_79104_5	chr9	+	972	1	ISM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	34868	0	34863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTGTATGTATGTTC	NA	False	NA	17	True	AATAAA	-18	NA	44551056	44552028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_44551100_44552000
Isoform_79105_4	chr11	+	178	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3660	False	NA	NA	False	NA	NA	NA	102280479	102280657	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_+_102280500_102280700
Isoform_79107_4	chr9	+	1046	1	FSM	ENSMUSG00000035382.10	ENSMUST00000215535.2	935	1	-108	-3	-65	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	45817729	45818775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45817700_45818800
Isoform_79108_4	chr9	+	514	1	FSM	ENSMUSG00000035382.10	ENSMUST00000215535.2	935	1	424	-3	-21	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	45818261	45818775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_45818300_45818800
Isoform_79109_3	chr9	+	180	1	Intergenic	novelGene_2026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATCTTATACTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	46166965	46167145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_46167000_46167100
Isoform_7911_28	chr11	-	1860	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	-31	12	-31	-12	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTTCAGTCGGCTG	NA	False	NA	-19	True	AATAAA	-15	NA	116381205	116361682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_79111_11	chr9	+	201	1	Intergenic	novelGene_2027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTTC	NA	False	NA	NA	False	NA	NA	NA	48373512	48373713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_48373500_48373700
Isoform_79113_38	chr9	+	547	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	-28	12	-28	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAAAATCATGTCTTGG	2755	False	NA	2	True	NA	NA	NA	48406713	48407260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_48406700_48407300
Isoform_79116_9	chr9	-	675	1	FSM	ENSMUSG00000031931.5	ENSMUST00000214882.2	1633	1	-28	986	0	-986	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-20	NA	14695822	14695147	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_14695100_14695800
Isoform_79118_1360	chr9	-	753	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	-13	28	-13	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	1360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	50256281	50255528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_50255500_50256300
Isoform_79128_5	chr9	-	188	1	Intergenic	novelGene_2028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTCTCATGCAGCTG	NA	False	NA	NA	False	NA	NA	NA	50704565	50704377	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_50704400_50704600
Isoform_79129_4	chr9	+	322	1	Intergenic	novelGene_2029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	52714596	52714918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_52714600_52714900
Isoform_79130_4	chr9	-	310	1	Intergenic	novelGene_2030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53315835	53315525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_53315500_53315800
Isoform_79131_4	chr9	+	1984	1	NIC	ENSMUSG00000031937.8	novel	1991	4	NA	NA	20	-18368	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-36	NA	15150360	15152344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_15150400_15152300
Isoform_79132_4	chr9	-	222	1	Intergenic	novelGene_2031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTTTGTGCCAGACA	2321	False	NA	NA	False	AAAAAG	-21	NA	54644903	54644681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_54644700_54644900
Isoform_79133_5	chr9	+	200	1	Intergenic	novelGene_2032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTACCCTCTG	NA	False	NA	NA	False	NA	NA	NA	55023986	55024186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_55024000_55024200
Isoform_79136_3	chr9	-	254	1	Intergenic	novelGene_2033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGGTAAGGGACCGGTT	9971	False	NA	NA	False	NA	NA	NA	55140021	55139767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_55139800_55140000
Isoform_79140_3	chr9	-	176	1	Intergenic	novelGene_2001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAACAGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	15213608	15213432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_15213400_15213600
Isoform_79144_4	chr15	+	169	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	6010	False	NA	NA	False	NA	NA	NA	34244750	34244919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr15_+_34244800_34244900
Isoform_79145_11	chr9	+	1986	1	ISM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	76341	1	76120	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTGACCAGTTTTGC	NA	False	NA	10	True	ATTAAA	-16	NA	56402233	56404219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_56402200_56404200
Isoform_79146_34	chr9	+	1936	1	ISM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	76341	51	76120	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATGTGCTTGCCTGAC	NA	False	NA	20	True	ATTAAA	-21	NA	56402233	56404169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr9_+_56402200_56404200
Isoform_79149_139	chr9	+	914	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTCTGGTCGTTCT	NA	False	NA	18	True	AATAAA	-27	NA	56844768	56845682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56844800_56845700
Isoform_79150_3	chr9	+	1307	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	11	-394	11	394	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	56844769	56846076	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_56844800_56846100
Isoform_79153_3	chr9	+	714	1	NIC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	37	-31578	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	56858198	56858912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_+_56858200_56858900
Isoform_79155_3	chr9	+	463	1	Antisense	novelGene_ENSMUSG00000032298.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	57055496	57055959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_+_57055500_57056000
Isoform_79156_5	chr9	-	2357	1	NIC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	3	-1464	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGGAAGGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	57169877	57167520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_57167500_57169900
Isoform_79158_5	chr9	-	3581	1	Antisense	novelGene_ENSMUSG00000062309.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAAATGA	9636	False	NA	NA	False	NA	NA	NA	57411743	57408162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr9_-_57408200_57411700
Isoform_7916_53	chr11	-	1851	10	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	270.156790323739	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381169	116361670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370666_116376694_116376762_116378943_116378997_116380873
Isoform_79161_255	chr9	+	1414	1	FSM	ENSMUSG00000062309.9	ENSMUST00000080514.9	1423	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCTCTGTCTTCAGTT	NA	False	NA	6	True	AATAAA	-11	NA	57411311	57412725	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_57411300_57412700
Isoform_79165_3	chr9	+	314	1	Intergenic	novelGene_2035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	57809556	57809870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_57809600_57809900
Isoform_79166_9	chr9	-	219	1	Intergenic	novelGene_2036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTTTGAGGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	57915125	57914906	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_57914900_57915100
Isoform_79167_4	chr9	-	222	1	Intergenic	novelGene_2037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGGTCGGGCGAGTG	2220	False	NA	NA	False	NA	NA	NA	58100094	58099872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_58099900_58100100
Isoform_7917_17	chr11	-	1711	9	FSM	ENSMUSG00000015869.17	ENSMUST00000152874.8	1691	9	-30	10	4	-10	multi-exon	FALSE	canonical	3	22	junction_5	291.250321888234	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTCAGTCGGCTGCT	NA	False	NA	-17	True	AATAAA	-17	NA	116381170	116361680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
Isoform_79172_3	chr9	+	859	1	Intergenic	novelGene_2039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	58182720	58183579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_58182700_58183600
Isoform_79173_4	chr9	+	746	1	Intergenic	novelGene_2040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	58182833	58183579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_58182800_58183600
Isoform_79174_12	chr9	-	230	1	Intergenic	novelGene_2041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTATTTTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	58208017	58207787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_58207800_58208000
Isoform_79176_12	chr9	-	193	1	Intergenic	novelGene_2042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTATACAATGTTGGAT	NA	False	NA	NA	False	NA	NA	NA	58535755	58535562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_58535600_58535800
Isoform_79177_8	chr16	+	206	1	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGCAGGTACAGAC	NA	False	NA	NA	False	NA	NA	NA	35676579	35676785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_35676600_35676800
Isoform_79183_8	chr9	-	228	1	Intergenic	novelGene_2045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTCCTGGATTTCTC	NA	False	NA	NA	False	NA	NA	NA	59512725	59512497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_59512500_59512700
Isoform_79191_3	chr9	-	840	1	NIC	ENSMUSG00000051705.14	novel	3682	2	NA	NA	1	-11955	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	6441	False	NA	NA	False	NA	NA	NA	59657909	59657069	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr9_-_59657100_59657900
Isoform_79192_8	chr3	-	230	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACGAACCAGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	116517193	116516963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr3_-_116517000_116517200
Isoform_79193_4	chr9	+	183	1	Intergenic	novelGene_2046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAATGCAAATAA	NA	False	NA	NA	False	NA	NA	NA	59746063	59746246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_59746100_59746200
Isoform_79194_3	chr9	+	1293	1	Genic_Genomic	ENSMUSG00000034485.11	novel	NA	NA	NA	NA	-62	-74358	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAACAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	60701761	60703054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr9_+_60701800_60703100
Isoform_79195_3	chr9	-	197	1	Intergenic	novelGene_2047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTCCCCTCCGTCCC	NA	False	NA	NA	False	AAGAAA	-7	NA	60779990	60779793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_-_60779800_60780000
Isoform_79196_13	chr9	+	203	1	Intergenic	novelGene_2048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAGAAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	61781194	61781397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr9_+_61781200_61781400
Isoform_79198_3	chr9	-	733	1	FSM	ENSMUSG00000032254.11	ENSMUST00000215404.2	2349	1	-29	1645	-6	-1645	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAACGGAA	NA	False	NA	NA	False	NA	NA	NA	61854048	61853315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_-_61853300_61854000
Isoform_792_113	chr10	-	1185	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	36	75	2	-75	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6593	False	NA	-7	True	TTTAAA	-3	NA	40122996	40099497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_79217_3	chrM	+	305	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	650	0	650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTGTAGCTTAATATTA	26	False	NA	-47	True	NA	NA	NA	719	1024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_700_1000
Isoform_79231_75	chrM	+	1587	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	1	-6	1	6	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCAGAGCCAGGAAATTG	-2	True	NA	40	True	AATAAA	-41	NA	1094	2681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_1100_2700
Isoform_7925_5	chr11	-	2839	5	ISM	ENSMUSG00000020802.9	ENSMUST00000134102.2	3550	9	1977	234	1977	-234	3prime_fragment	FALSE	canonical	2	105	junction_3	40.1520547419432	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATACAAAACACAAAAAAA	941	False	NA	8	True	NA	NA	NA	116432866	116428799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164
Isoform_79258_32	chrM	+	1030	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	-74	1	-74	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATGTCTGATAAAAGA	253	False	NA	-18	True	NA	NA	NA	2676	3706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_2700_3700
Isoform_79261_1124	chrM	+	955	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATGTCTGATAAAAGA	-1	True	NA	-18	True	NA	NA	NA	2751	3706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_2800_3700
Isoform_79282_60	chrM	+	1036	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	-2	True	NA	-28	True	NA	NA	NA	3914	4950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_3900_5000
Isoform_7930_127	chr11	-	3670	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-80	3	-33	1	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGCCTTTTGCCTTA	NA	False	NA	-18	True	ATTAAA	-16	NA	116515106	116488993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
Isoform_79302_97	chrM	+	193	1	FSM	ENSMUSG00000064346.1	ENSMUST00000082397.1	67	1	-192	66	-192	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	0	True	NA	-28	True	NA	NA	NA	4757	4950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_4800_5000
Isoform_79304_4	chrM	+	567	1	FSM	ENSMUSG00000064346.1	ENSMUST00000082397.1	67	1	-192	-308	-192	308	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTTCATTAATCGTTG	0	True	NA	NA	False	NA	NA	NA	4757	5324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_4800_5300
Isoform_79305_98	chrM	+	307	1	Antisense	novelGene_ENSMUSG00000064350.1_AS_novelGene_ENSMUSG00000064347.1_AS_novelGene_ENSMUSG00000064348.1_AS_novelGene_ENSMUSG00000064349.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTTCATTAATCGTTG	0	True	NA	NA	False	NA	NA	NA	5017	5324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrM_+_5000_5300
Isoform_79307_5	chr2	-	182	1	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTTCATTAATCGTTG	NA	False	NA	NA	False	NA	NA	NA	22479844	22479662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_22479700_22479800
Isoform_7931_7	chr11	-	2205	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	37	1401	37	-815	multi-exon	TRUE	canonical	3	12	junction_5	7.34421541078419	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTTTTCCACATTTCC	NA	False	NA	1	True	AATAAA	-20	NA	116585657	116567529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
Isoform_79315_1263	chrM	+	1617	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-2	-70	-2	70	mono-exon	FALSE	NA	NA	NA	NA	NA	1263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTAGTAAAATCAATT	-1	True	NA	NA	False	NA	NA	NA	5325	6942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_5300_6900
Isoform_79327_1786	chrM	+	752	1	FSM	ENSMUSG00000064353.1	ENSMUST00000082404.1	70	1	-751	69	-751	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	1786	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTAGTAAAATCAATT	2	True	NA	NA	False	NA	NA	NA	6190	6942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_6200_6900
Isoform_7933_9	chr11	-	1714	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	13	336	13	-336	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTCGAAATATGGAGAC	6339	False	NA	-8	True	AATAAA	-20	NA	116718859	116694223	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
Isoform_79338_1761	chrM	+	687	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1761	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	-1	True	NA	NA	False	ACTAAA	-38	NA	7012	7699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_7000_7700
Isoform_7934_13	chr11	-	729	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	-20	1354	-20	-1354	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATGTAAGGATCTGCAA	6306	False	NA	-8	True	TATAAA	-15	NA	116718892	116695241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
Isoform_7935_7	chr11	-	1760	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734316	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_79353_43	chr1	-	1626	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	-841	-2	-841	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	False	NA	NA	False	NA	NA	NA	24653893	24652267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24652300_24653900
Isoform_79359_46	chr1	-	478	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	202	-2	202	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCCACCAAACTCATGC	NA	False	NA	NA	False	AATACA	-3	NA	24653530	24653052	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24653100_24653500
Isoform_7936_11	chr11	-	1641	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734197	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_79373_51	chr1	-	663	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	122	-2	122	2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	False	NA	NA	False	NA	NA	NA	24652930	24652267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr1_-_24652300_24652900
Isoform_79378_28	chrM	+	344	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	3	1	3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTAATTAGTTTAAAAA	1	True	NA	NA	False	AAAAAG	-20	NA	9461	9805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_9500_9800
Isoform_79379_157	chrM	+	1667	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-289	0	-289	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	0	True	NA	13	True	NA	NA	NA	9877	11544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_9900_11500
Isoform_7939_8	chr11	-	1807	7	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734320	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_794_75	chr10	-	1217	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	4	75	4	-75	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6561	False	NA	-7	True	TTTAAA	-3	NA	40123028	40099497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_7941_7	chr11	-	1445	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	567	0	-162	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116733708	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
Isoform_79418_5	chrM	-	1214	1	Antisense	novelGene_ENSMUSG00000064371.1_AS_novelGene_ENSMUSG00000064370.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGTAGTTGAATTACA	835	False	NA	0	True	TTTAAA	-36	NA	15353	14139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrM_-_14100_15400
Isoform_79419_1150	chrM	+	1143	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTGATAGTATAAACATT	-1	True	NA	12	True	ACTAAA	-12	NA	14145	15288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrM_+_14100_15300
Isoform_7942_14	chr11	-	1419	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	593	0	-136	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116733682	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
Isoform_7943_131	chr11	-	1709	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-42	1	-42	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734317	116728258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_79437_6	chrM	+	585	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGCCGTCAAGGCATG	-1	True	NA	-98	True	NA	NA	NA	15356	15941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrM_+_15400_15900
Isoform_79438_4	chrM	+	694	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACATAAATGCTACTCAA	-1	True	NA	11	True	NA	NA	NA	15356	16050	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrM_+_15400_16000
Isoform_79439_4	chrM	+	942	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	A	-1	True	NA	NA	False	AATAAA	-9	NA	15356	16298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrM_+_15400_16300
Isoform_79440_4	chrM	+	678	1	Intergenic	novelGene_2117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCCTCTTAATGCCAAA	10	True	NA	61	True	CATAAA	-41	NA	15422	16100	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrM_+_15400_16100
Isoform_79441_44	chrM	-	765	1	Intergenic	novelGene_2118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGTAGTTTAATTAGA	1	True	NA	-5	True	CATAAA	-32	NA	16187	15422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrM_-_15400_16200
Isoform_79449_14	chrUn_GL456382v1	-	378	1	Intergenic	novelGene_2119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCCGACTTCGTCGA	NA	False	NA	NA	False	NA	NA	NA	14752	14374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_GL456382v1_-_14400_14800
Isoform_7945_131	chr11	-	1559	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	109	0	15	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734166	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_79450_3	chrUn_JH584304v1	-	3990	1	Intergenic	novelGene_2123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGATCAACTCAGCC	NA	False	NA	-3	True	NA	NA	NA	59731	55741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_JH584304v1_-_55700_59700
Isoform_79451_3	chrUn_JH584304v1	-	3939	1	Intergenic	novelGene_2121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGATCAACTCAGCC	NA	False	NA	-3	True	NA	NA	NA	59680	55741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_JH584304v1_-_55700_59700
Isoform_79453_9	chrUn_JH584304v1	+	458	1	Intergenic	novelGene_2124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59851	60309	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_JH584304v1_+_59900_60300
Isoform_79458_3	chrUn_JH584304v1	-	3295	1	Intergenic	novelGene_2120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGATCAACTCAGCC	NA	False	NA	-3	True	NA	NA	NA	59036	55741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_JH584304v1_-_55700_59000
Isoform_79460_12	chrUn_JH584304v1	-	3219	2	Intergenic	novelGene_2122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGATCAACTCAGCC	NA	False	NA	-3	True	NA	NA	NA	59716	55741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_JH584304v1_-_58836_59591
Isoform_79464_12	chrUn_MU069435v1	-	1134	1	Intergenic	novelGene_2135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30816	29682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_29700_30800
Isoform_79466_105	chrUn_MU069435v1	+	491	1	Intergenic	novelGene_2125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGGGCTTTCCCGTGG	NA	False	NA	27	True	NA	NA	NA	96	587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_+_100_600
Isoform_79468_8	chrUn_MU069435v1	+	1031	1	Intergenic	novelGene_2126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTTCGGAGGTCGACC	NA	False	NA	22	True	NA	NA	NA	131	1162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_+_100_1200
Isoform_79469_3	chrUn_MU069435v1	+	172	1	Intergenic	novelGene_2127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	5855	6027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_+_5900_6000
Isoform_79472_27	chrUn_MU069435v1	-	371	1	Intergenic	novelGene_2134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	28002	27631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_27600_28000
Isoform_79475_11	chrUn_MU069435v1	+	725	1	Intergenic	novelGene_2133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	-46	True	GATAAA	-42	NA	25748	26473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_+_25700_26500
Isoform_79476_7	chrUn_MU069435v1	-	587	1	Intergenic	novelGene_2131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	19356	18769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_18800_19400
Isoform_79477_4	chrUn_MU069435v1	-	178	1	Intergenic	novelGene_2128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	6762	6584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_6600_6800
Isoform_7948_6	chr11	-	1678	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734323	116728257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
Isoform_79481_11	chrUn_MU069435v1	-	931	1	Intergenic	novelGene_2130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	15595	14664	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_14700_15600
Isoform_79484_3	chrUn_MU069435v1	-	503	1	Intergenic	novelGene_2132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAAAGAAAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	26042	25539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_25500_26000
Isoform_79486_3	chrUn_MU069435v1	-	832	1	Intergenic	novelGene_2129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAGAAGGAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7936	7104	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrUn_MU069435v1_-_7100_7900
Isoform_79488_9	chrX	-	1809	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	29	0	29	0	multi-exon	FALSE	canonical	3	19	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995444	5993272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_5994830_5995192
Isoform_79489_3	chrX	-	2581	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-7	5816	-7	-157	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTAGTGTGTTGTCTG	NA	False	NA	NA	False	AAAACA	-26	NA	7054960	7025864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
Isoform_79490_3	chrX	-	2732	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-7	5665	-7	-6	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTGTTCTTTAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	7054960	7025713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
Isoform_79491_34	chrX	-	503	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	29	8	29	-5	multi-exon	FALSE	canonical	3	121	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7289198	7278349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7278772_7289117
Isoform_79492_5	chrX	-	651	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15563	5	-6592	-5	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7295819	7278349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_7278772_7290368_7290524_7295745
Isoform_79493_3	chrX	-	719	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15495	5	-6660	-5	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7295887	7278349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_7278772_7290368_7290524_7295745
Isoform_79494_3	chrX	-	685	3	NNC	ENSMUSG00000063018.7	novel	885	4	NA	NA	-6641	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAGTTACTTTGTGG	NA	False	NA	-36	True	NA	NA	NA	7295868	7278349	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_7278772_7290383_7290524_7295745
Isoform_79495_494	chrX	-	2217	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	136	0	136	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7471620	7460047	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
Isoform_79498_1356	chrX	-	1124	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	30	3	12	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7537599	7534182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
Isoform_79499_195	chrX	-	1153	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1	3	1	-3	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAGTTAACTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7537628	7534182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
Isoform_79504_11	chrX	-	3828	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	1	-7	intron_retention	TRUE	canonical	3	16	junction_9	8.46926177784867	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAACTTGATTGAGTCT	NA	False	NA	-11	True	AATAAA	-7	NA	7617143	7597959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
Isoform_79506_124	chrX	-	1124	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	87	-63	4	-1	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	673	False	NA	-2	True	AATAAA	-21	NA	7765131	7760758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
Isoform_79507_36	chrX	-	1202	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	7	-61	7	-3	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATGAGGCTTGAGTGC	593	False	NA	-4	True	AATAAA	-19	NA	7765211	7760760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
Isoform_79508_5	chrX	-	1188	7	NIC	ENSMUSG00000031157.11	novel	763	7	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	600	False	NA	-2	True	AATAAA	-21	NA	7765204	7760758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
Isoform_79509_11	chrX	-	1114	7	NIC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	674	False	NA	-2	True	AATAAA	-21	NA	7765130	7760758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
Isoform_7951_85	chr11	-	1394	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	746.295890083521	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6003	False	NA	-8	True	ATTAAA	-28	NA	116743920	116740729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116741180_116741681_116741788_116742846_116743158_116743393
Isoform_79510_29	chrX	-	1017	7	FSM	ENSMUSG00000031157.11	ENSMUST00000156741.8	763	7	20	-274	-1	-1	multi-exon	FALSE	canonical	3	64	junction_6	182.287014226345	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	585	False	NA	-2	True	AATAAA	-21	NA	7765219	7760758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765204
Isoform_79511_86	chrX	-	1064	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	39	1	-31	-1	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	335	False	NA	-2	True	AATAAA	-21	NA	7765469	7760758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
Isoform_79512_12	chrX	-	977	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	92	8	92	-8	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACTAAATCTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	7794754	7790522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7791453_7794707
Isoform_79513_3	chrX	-	3973	29	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_27	82.0528932818238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAAGTGCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	7814038	7796361	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813268_7813363_7813484_7813888
Isoform_79514_5	chrX	-	4380	28	ISM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	92	0	-30	0	intron_retention	FALSE	canonical	3	320	junction_26	43.7256065642336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814036	7796360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
Isoform_79515_18	chrX	-	4043	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	92	7	-30	-5	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814036	7796367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
Isoform_79517_8	chrX	-	4084	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	54	4	3	-2	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814074	7796364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
Isoform_79518_58	chrX	-	3996	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	64	9	13	-5	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814064	7796367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
Isoform_79519_131	chrX	-	3968	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	92	9	-30	-5	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814036	7796367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
Isoform_79520_3	chrX	-	954	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2658	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	9.28559218478941	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTCCTCACTCTTGG	NA	False	NA	-14	True	AATAAA	-16	NA	7882073	7870443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_7870742_7871941_7872098_7881456_7881595_7881711
Isoform_79521_17	chrX	-	2779	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	5	-6	5	-3	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTGGGAGATTGAG	7360	False	NA	NA	False	NA	NA	NA	7940492	7927667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
Isoform_79522_13	chrX	-	2878	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-97	-3	-42	3	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGAGATTTGGGAGATT	7258	False	NA	NA	False	NA	NA	NA	7940594	7927670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
Isoform_79524_64	chrX	-	2694	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	158	264	19	0	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	7011	False	NA	NA	False	NA	NA	NA	7940841	7927673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
Isoform_79525_10	chrX	-	2818	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	34	264	3	0	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	9914	False	NA	NA	False	NA	NA	NA	7940965	7927673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
Isoform_79526_3	chrX	-	3654	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	31	-2519	-24	-501	multi-exon	FALSE	canonical	3	73	junction_2	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTGTTTTGTTTTGTT	7331	False	NA	NA	False	NA	NA	NA	7940521	7934148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7937490_7938561_7938708_7940354
Isoform_79527_10	chrX	-	2361	12	FSM	ENSMUSG00000031165.7	ENSMUST00000033505.7	2114	12	30	-277	30	277	multi-exon	FALSE	canonical	2	6	junction_8	4.36552989219744	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTGAAATTTTGTT	7471	False	NA	NA	False	NA	NA	NA	7956707	7947414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7948229_7951744_7951860_7952080_7952536_7952802_7952957_7953168_7953212_7953999_7954175_7954962_7955017_7955112_7955155_7955274_7955378_7955494_7955582_7956082_7956224_7956529
Isoform_79529_13	chrX	-	1175	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	4	4	3	3	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6539	False	NA	-13	True	ATTAAA	-19	NA	8011958	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_7953_24	chr11	-	2453	3	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	235	junction_1	770	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6003	False	NA	-8	True	ATTAAA	-28	NA	116743920	116740729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116741180_116741681_116743158_116743393
Isoform_79530_40	chrX	-	1151	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	28	4	1	3	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6563	False	NA	-13	True	ATTAAA	-19	NA	8011934	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_79533_27	chrX	-	1158	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	-3	-3	-2	3	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6559	False	NA	-13	True	ATTAAA	-19	NA	8011938	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_79534_42	chrX	-	1170	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	162	6	4	3	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6540	False	NA	-13	True	ATTAAA	-19	NA	8011957	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_79535_100	chrX	-	1147	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	185	6	1	3	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6563	False	NA	-13	True	ATTAAA	-19	NA	8011934	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_79538_97	chrX	-	1153	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	75	-3	-1	3	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATACTGATAATGCTT	6560	False	NA	-13	True	ATTAAA	-19	NA	8011937	8008603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
Isoform_79543_387	chrX	-	2378	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	257	13	-33	-2	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCACTGTGGTATGTGT	NA	False	NA	-20	True	NA	NA	NA	8042163	8020723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_79544_33	chrX	-	2447	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	188	13	-35	-2	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCACTGTGGTATGTGT	NA	False	NA	-20	True	NA	NA	NA	8042232	8020723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_79547_10	chrX	-	2238	5	FSM	ENSMUSG00000039201.11	ENSMUST00000143984.2	2184	5	-33	-21	-33	2	multi-exon	FALSE	canonical	3	5	junction_3	59.3738157776641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTCTCTATTTCTT	NA	False	NA	-5	True	NA	NA	NA	8042163	8020708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8040439_8040550_8041949
Isoform_79548_25	chrX	-	2524	5	FSM	ENSMUSG00000039201.11	ENSMUST00000133093.2	2560	5	34	2	-33	-2	multi-exon	FALSE	canonical	3	121	junction_3	12.051970793194	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCACTGTGGTATGTGT	NA	False	NA	-20	True	NA	NA	NA	8042163	8020723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8022306_8022554_8023018_8038976_8039132_8040439_8040550_8041949
Isoform_7955_1597	chr11	-	1896	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	0	3	0	0	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6003	False	NA	-8	True	ATTAAA	-28	NA	116743920	116740729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_116741788_116742846_116743158_116743393
Isoform_79550_483	chrX	-	1086	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	654	3	40	-1	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059097	8051570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
Isoform_79551_207	chrX	-	1126	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	614	3	0	-1	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059137	8051570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
Isoform_79554_13	chrX	-	1237	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAGAGATATTTAATT	NA	False	NA	-6	True	AATAAA	-16	NA	8059140	8051570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
Isoform_79555_4	chrX	-	1846	14	FSM	ENSMUSG00000031169.14	ENSMUST00000082320.12	1883	14	35	2	1	0	multi-exon	FALSE	canonical	1	2	junction_7	23.6039812106789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	1999	False	NA	-2	True	AATAAA	-17	NA	8072729	8060088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069264_8069283_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
Isoform_79556_31	chrX	-	1829	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	12	-2	2	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	2000	False	NA	0	True	AATAAA	-19	NA	8072728	8060086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
Isoform_79559_75	chrX	-	1624	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	32	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118602	8106658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_79560_6	chrX	-	1922	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-271	5	-260	-5	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACATATGCACGTTGCT	NA	False	NA	-19	True	AATAAA	-16	NA	8118905	8106663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_79561_31	chrX	-	1672	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	1	1752	1	0	multi-exon	FALSE	canonical	3	43	junction_4	72.5114933418604	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118644	8106658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_79562_5	chrX	-	1056	5	FSM	ENSMUSG00000031171.12	ENSMUST00000147467.2	1047	5	-7	-2	-7	2	multi-exon	FALSE	canonical	3	296	junction_2	13.7386316640341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGTCAATGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	8118609	8114758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
Isoform_79563_64	chrX	-	2129	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	44	3	44	-3	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATCTGGCTCTGGTTGA	NA	False	NA	-4	True	AATAAA	-18	NA	9529198	9520508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
Isoform_79570_5	chrX	-	2679	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	210	-150	23	-6	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082949	10024460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_79571_33	chrX	-	2719	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	201	6	14	-6	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082958	10024460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_79572_6	chrX	-	2089	13	NIC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	32.0350285711681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGGATATGTGCTTG	NA	False	NA	-9	True	AATAAA	-23	NA	10082961	10024463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
Isoform_79574_10	chrX	-	2283	7	ISM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	32830	2	32830	1	3prime_fragment	FALSE	canonical	3	150	junction_3	14.7129950119689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11913962	11902980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661
Isoform_79575_4	chrX	-	6278	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	0	561	0	-558	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGAGCTCTGTGC	NA	False	NA	-18	True	NA	NA	NA	11946792	11903539	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
Isoform_79576_221	chrX	-	2601	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	94	4	94	-4	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTACAGTTTTTAA	NA	False	NA	-7	True	AATAAA	-21	NA	12539813	12521121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_79581_6	chrX	-	1269	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	56	1374	56	-1374	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTCCAGGTTGCTGTT	NA	False	NA	NA	False	AATACA	-24	NA	12539851	12522491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
Isoform_79584_3	chrX	-	2309	17	FSM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	241	11	241	-11	multi-exon	TRUE	canonical	1	1	junction_1	27.2362350555285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAACTATTTTAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	12628071	12575378	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_12575480_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_79586_55	chrX	-	2276	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	-5	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117545	16998292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
Isoform_79587_7	chrX	-	2133	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	30.7679486912382	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117553	16998292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
Isoform_79588_3	chrX	-	2138	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68061	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	31.8576477823179	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGACCATTTTA	NA	False	NA	-14	True	ATTAAA	-12	NA	17117546	16998292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
Isoform_79591_40	chrX	-	1846	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	133	4	61	-4	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGATTGTGCTTATAT	NA	False	NA	-13	True	AATAAA	-17	NA	17438431	17422806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_79592_6	chrX	-	1954	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	26	3	26	-3	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGATTGTGCTTATATA	NA	False	NA	-12	True	AATAAA	-18	NA	17438538	17422805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_79595_5	chrX	-	2809	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	134	-960	62	960	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCTTGGCGTCAGAAG	NA	False	NA	NA	False	ACTAAA	-12	NA	17438430	17421842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
Isoform_79597_906	chrX	-	557	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	346	5	346	-5	multi-exon	FALSE	canonical	3	2198	junction_1	70	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGGTTACTGCT	NA	False	NA	-9	True	ATTAAA	-9	NA	20483512	20481569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20481782_20481952_20482084_20483298
Isoform_79598_55	chrX	-	851	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	52	5	52	-5	multi-exon	FALSE	canonical	3	2198	junction_1	70	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGGTTACTGCT	NA	False	NA	-9	True	ATTAAA	-9	NA	20483806	20481569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20481782_20481952_20482084_20483298
Isoform_79599_10	chrX	-	897	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	6	5	6	-5	multi-exon	FALSE	canonical	3	2198	junction_1	70	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGGTTACTGCT	NA	False	NA	-9	True	ATTAAA	-9	NA	20483852	20481569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20481782_20481952_20482084_20483298
Isoform_79600_55	chrX	-	1510	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	48	78	48	-78	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797746	20791770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
Isoform_79601_15	chrX	-	1577	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	-21	80	-21	-80	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTCTAAGATTCTGT	NA	False	NA	-7	True	AATAAA	-13	NA	20797815	20791772	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
Isoform_79602_326	chrX	-	2763	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	22	763	22	-763	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTTGGTATTTTTTTT	NA	False	NA	-3	True	AATATA	-22	NA	20816825	20800396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
Isoform_79604_4	chrX	-	3036	10	NIC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	-11383	-766	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	264.516516789256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGTTGGTATTTTT	NA	False	NA	-6	True	AATATA	-19	NA	20828230	20800399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_79606_161	chrX	-	574	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	39	262	-4	-1	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828217	20818162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_79607_13	chrX	-	481	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	227.721760049408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828232	20818162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_20818263_20818446_20818511_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_79608_4	chrX	-	770	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	539	junction_4	46.7478341744299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828229	20818162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
Isoform_79609_37	chrX	-	3287	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
Isoform_79611_23	chrX	-	3284	10	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	389.833899418461	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231302	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732_23227824_23231194
Isoform_79612_14	chrX	-	3377	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3725	0	at_least_one_novel_splicesite	TRUE	canonical	3	201	junction_6	415.817192405509	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185143	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
Isoform_79613_120	chrX	-	3220	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3388	14	3359	0	3prime_fragment	FALSE	canonical	3	772	junction_6	153.107671864193	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227933	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
Isoform_79616_77	chrX	-	3217	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	20	14	-9	0	multi-exon	FALSE	canonical	3	241	junction_8	283.721694623446	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231301	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
Isoform_79617_4	chrX	-	3283	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	-46	14	-46	0	multi-exon	FALSE	canonical	3	241	junction_8	283.721694623446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231367	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
Isoform_79620_58	chrX	-	3311	8	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3725	0	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_7	307.654590309938	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185143	23085523	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23184851
Isoform_79624_6	chrX	-	550	3	ISM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-272	6726	27	-6726	5prime_fragment	FALSE	canonical	3	34	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTGGGCTGAATTTT	NA	False	NA	-2	True	NA	NA	NA	35909021	35882257	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_35882387_35900125_35900228_35908702
Isoform_79625_71	chrX	-	3249	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	87	4	-4	3	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTAGCTTGTTTTGATC	NA	False	NA	NA	False	AATAAA	-24	NA	36127812	36112199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_79626_9	chrX	-	3204	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	28	108	20	-101	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTTGTTGGGGGTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	36127871	36112303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_79629_9	chrX	-	2389	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	150	918	-15	-918	multi-exon	TRUE	canonical	3	7	junction_1	15.297865581774	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGATCTGCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	36253159	36175896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_79630_12	chrX	-	2080	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-801	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253147	36179484	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_79631_3	chrX	-	1537	4	ISM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	137	30639	-28	20926	5prime_fragment	FALSE	canonical	3	49	junction_3	5.24933858267454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTACTATAGTTTTTCT	NA	False	NA	NA	False	TTTAAA	-4	NA	36253172	36209322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_36210408_36230248_36230445_36238715_36238831_36253031
Isoform_79633_2816	chrX	-	354	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	220	38	-16	-38	multi-exon	FALSE	canonical	3	12849	junction_1	35	2816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTTCTGGTTTATA	NA	False	NA	-8	True	AATAAA	-16	NA	36348835	36346210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36346403_36347637_36347742_36348777
Isoform_79638_5	chrX	-	1282	10	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	18	55	combination_of_known_junctions	FALSE	canonical	3	132	junction_2	56.9368287590361	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGGAAAGAAGAGTGA	NA	False	NA	37	True	AAGAAA	-27	NA	36373957	36359273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_79646_509	chrX	-	400	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	8	11	8	-11	multi-exon	FALSE	canonical	3	2951	junction_1	110	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAAAGTCATTTTT	2320	False	NA	-12	True	AATAAA	-9	NA	36454808	36451251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36451395_36453526_36453617_36454641
Isoform_79648_18	chrX	-	809	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	19	-11	19	11	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTAGGTTGTGGCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	36474675	36472989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
Isoform_79649_4	chrX	-	851	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	-26	-8	-26	8	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAAATTTAGGTTGTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	36474720	36472992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
Isoform_7965_145	chr11	-	2952	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1775	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAATGTGTCCTGGTCTT	6003	False	NA	-11	True	ATTAAA	-25	NA	116743920	116740732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_116743158_116743393
Isoform_79650_23	chrX	-	823	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3923	-13	3923	13	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTTTATTCATGTGTC	NA	False	NA	-10	True	AATAAA	-14	NA	36481988	36477443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
Isoform_79652_3	chrX	-	750	3	NIC	ENSMUSG00000079629.6	novel	795	4	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36825121	36820766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_36820996_36824438_36824851_36825012
Isoform_79653_8	chrX	-	959	4	FSM	ENSMUSG00000079628.4	ENSMUST00000115166.3	979	4	14	6	14	-6	multi-exon	FALSE	canonical	3	17	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTCATGTGTCTTTT	6382	False	NA	NA	False	AATAAA	-15	NA	36832966	36828158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36828390_36829677_36829724_36832090_36832497_36832690
Isoform_79654_6	chrX	-	817	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	-35	-3	-35	3	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTGTTTTGTGCTTC	9194	False	NA	NA	False	AATAAA	-15	NA	36854965	36850646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
Isoform_79655_9	chrX	-	1017	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-136	1	-136	-1	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGCTCCATTATCT	942	False	NA	-2	True	AATAAA	-15	NA	36990783	36987974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
Isoform_79656_19	chrX	-	841	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	40	1	-26	-1	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGCTCCATTATCT	1118	False	NA	-2	True	AATAAA	-15	NA	36990607	36987974	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
Isoform_79658_9	chrX	-	1731	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	36	2	-4	-2	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTGTTTCAATTTGT	NA	False	NA	-3	True	AATAAA	-16	NA	37545295	37493940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
Isoform_79659_29	chrX	-	3568	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	34	2	-6	-2	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37545297	37508385	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
Isoform_79662_15	chrX	-	4762	21	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	11188	-1649	-346	1649	3prime_fragment	FALSE	non_canonical	3	1019	junction_20	124.443109491848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAATGTTTCTGGGG	7809	False	NA	-29	True	AATAAA	-10	NA	37653885	37620501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
Isoform_79664_3	chrX	-	3099	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-13	4	0	-4	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGTTATTTGAC	NA	False	NA	-9	True	GATAAA	-10	NA	37665073	37622454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
Isoform_79665_10	chrX	-	3356	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	-12	0	12	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATACTTAAACTGCATGC	NA	False	NA	-16	True	AATAAA	-32	NA	37665073	37622138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
Isoform_79666_9	chrX	-	4993	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	1	-1650	1	1650	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTTTCTGGGGA	NA	False	NA	-28	True	AATAAA	-11	NA	37665072	37620500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
Isoform_79667_14	chrX	-	3049	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	295	0	1	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGACTTCTTTTAT	NA	False	NA	0	True	GATAAA	-19	NA	37665073	37622445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
Isoform_79669_11	chrX	-	733	2	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	38530	0	-38230	5prime_fragment	FALSE	canonical	3	600	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATATCCT	NA	False	NA	NA	False	NA	NA	NA	37665073	37660680	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_37661356_37665015
Isoform_79670_7	chrX	-	1288	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-23	184	-23	-184	multi-exon	FALSE	canonical	3	94	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGCAATTTTTCAAAC	NA	False	NA	NA	False	AATAAA	-8	NA	37723987	37719845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37721001_37723854
Isoform_79671_17	chrX	-	1434	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	10	5	10	-5	multi-exon	FALSE	canonical	3	94	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTTTCTATTACTTT	NA	False	NA	-7	True	ATTAAA	-13	NA	37723954	37719666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37721001_37723854
Isoform_79672_3	chrX	-	1357	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-29	121	-29	-121	multi-exon	FALSE	canonical	3	94	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTAATCTGTGGTGTA	NA	False	NA	NA	False	GATAAA	-14	NA	37723993	37719782	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_37721001_37723854
Isoform_79675_4	chrX	-	4007	31	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	-1	19447	-1	156	5prime_fragment	FALSE	canonical	3	149	junction_12	22.2343328111179	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAGAGAAGTTCAAG	NA	False	NA	-18	True	NA	NA	NA	41000779	40903314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_79678_103	chrX	-	2772	23	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	15	32192	0	-3775	5prime_fragment	FALSE	canonical	3	149	junction_4	23.7647300993345	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTGATGTAGCGAT	NA	False	NA	NA	False	AATAAA	-43	NA	41000763	40916059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
Isoform_79688_4	chrX	-	3477	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	36	-4	0	4	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTTTTCTTTAAAAT	NA	False	NA	-1	True	AATAAA	-44	NA	43879038	43875442	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_43877171_43877289
Isoform_7969_272	chr11	-	2910	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-42	-3	-23	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671507	117656810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_79690_4	chrX	-	3511	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	0	-2	0	2	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTGTTTTTCTTTAAA	NA	False	NA	-3	True	AATAAA	-42	NA	43879074	43875444	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_43877171_43877289
Isoform_79691_3	chrX	-	3217	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-68	0	-68	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47123798	47114022	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47116585_47117170_47117343_47123315
Isoform_79692_7	chrX	-	2974	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	4	4	4	-4	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGATGCCTGCCTCCTCC	NA	False	NA	-6	True	ATTAAA	-12	NA	47297560	47260849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
Isoform_79694_7	chrX	-	6203	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-124	9	-124	-6	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGAAGGTGTTCAGAT	NA	False	NA	-7	True	NA	NA	NA	47543170	47499931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
Isoform_79697_18	chrX	-	2096	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	125	0	-8	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602311	47563820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
Isoform_79699_184	chrX	-	2201	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	36	0	32	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602404	47563820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
Isoform_79700_1071	chrX	-	2125	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	109	3	-28	-2	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTTGTTTTATTT	NA	False	NA	-4	True	ATTAAA	-13	NA	47602331	47563823	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
Isoform_7971_5	chr11	-	2993	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-125	-3	-106	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671590	117656810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_79713_3	chrX	-	3163	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	8	55	8	-55	multi-exon	TRUE	canonical	3	25	junction_4	10.7695042700313	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGGGCTGTGAGGCT	NA	False	NA	-10	True	AATAAA	-3	NA	48377111	48099389	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
Isoform_79714_9	chrX	-	3191	2	ISM	ENSMUSG00000085396.8	ENSMUST00000148530.3	716	6	7	12646	7	-12646	5prime_fragment	FALSE	canonical	3	63	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAAAACAA	NA	False	NA	NA	False	ATTAAA	-36	NA	49724173	49717033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_49719873_49723821
Isoform_79715_4	chrX	-	3131	3	NNC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	2	-12644	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAACAAGA	NA	False	NA	NA	False	ATTAAA	-38	NA	49724136	49717031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_49718030_49718054_49719873_49723821
Isoform_79717_12	chrX	-	3178	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	-7	374	-7	-374	multi-exon	FALSE	canonical	3	105	junction_1	4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTCTTTAATTATT	NA	False	NA	-1	True	AATAAA	-21	NA	50106902	50093162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_50095628_50103847_50104161_50106502
Isoform_79718_7	chrX	-	1172	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	2886	62	-2886	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAAACAGAGCAA	NA	False	NA	NA	False	CATAAA	-29	NA	50889959	50845721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
Isoform_7972_6	chr11	-	2818	20	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	75.9397267921288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671789	117656810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671735
Isoform_79720_3	chrX	-	1521	5	NIC	ENSMUSG00000031118.9	novel	1232	4	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	35.6195171219375	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGTTGCTCCGTTTC	NA	False	NA	-3	True	CATAAA	-16	NA	51061672	51057572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_51058747_51059091_51059163_51059359_51059477_51059858_51059953_51061607
Isoform_79721_15	chrX	-	1406	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-23	1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	-1	True	CATAAA	-18	NA	51061672	51057570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
Isoform_79722_7	chrX	-	2081	3	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-2	1	intron_retention	FALSE	canonical	3	81	junction_2	1	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCTCCGTTTCAT	NA	False	NA	-1	True	CATAAA	-18	NA	51061651	51057570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_51058747_51059091_51059953_51061607
Isoform_79724_14	chrX	-	2900	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-240	-9	-240	9	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCCATTTATCCCTGT	NA	False	NA	-10	True	ATTAAA	-24	NA	51254369	51141888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_79729_105	chrX	-	2773	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-124	2	-124	-2	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGCTGGAAAATTTCCA	NA	False	NA	-21	True	ATTAAA	-13	NA	51254253	51141899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_7973_55	chr11	-	2900	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	4	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTCAGGATGAGCT	NA	False	NA	0	True	ATTAAA	-19	NA	117671508	117656809	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_79734_9	chrX	-	2938	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-289	2	-289	-2	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGCTGGAAAATTTCCA	NA	False	NA	-21	True	ATTAAA	-13	NA	51254418	51141899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
Isoform_79736_332	chrX	-	2262	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-52	6	-23	-6	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGGTGTTGGTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	51702850	51361308	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
Isoform_79739_3	chrX	-	2795	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-43	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGGATCGTAAAAGT	NA	False	NA	-19	True	AATAAA	-18	NA	52357940	52332307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_79740_3	chrX	-	4331	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-805	10	-20	-10	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAAGATGGATCGTAA	NA	False	NA	-23	True	AATAAA	-14	NA	52358702	52332311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
Isoform_79742_37	chrX	-	2172	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	10	-409	10	-1	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTTCTCTCTCCGTT	NA	False	NA	-5	True	CATAAA	-17	NA	52459369	52433475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
Isoform_79747_398	chrX	-	1237	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_79748_37	chrX	-	1313	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-90	1	-90	-1	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759888	52744868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_79749_10	chrX	-	2696	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1460	-12	1460	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATATTAATGTTATCAA	NA	False	NA	NA	False	NA	NA	NA	52759810	52743407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_7975_10	chr11	-	2928	20	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	66.6673222497775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117671511	117656812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_79752_8	chrX	-	890	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTTAGTATATTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	52759810	52744866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
Isoform_79753_13	chrX	-	3308	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
Isoform_79758_28	chrX	-	988	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-7	3	3	-3	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799670	52785717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
Isoform_7976_9	chr11	-	2810	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-19	3	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	76.5374918214661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671503	117656810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
Isoform_79760_12	chrX	-	1026	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	3	3	3	-3	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799660	52785717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
Isoform_79762_4	chrX	-	1011	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	52799663	52785717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
Isoform_79765_26	chrX	-	4113	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	127	-6	127	6	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTAGTGGGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	55643302	55630865	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
Isoform_79768_3	chrX	-	4262	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	-26	-2	-26	2	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	-5	True	AATAAA	-16	NA	55643455	55630869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
Isoform_79769_8	chrX	-	2375	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	-54	-182	1	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	56438395	56428707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_7977_19	chr11	-	2110	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	230	0	5	0	intron_retention	FALSE	canonical	3	985	junction_3	61.9732805328232	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716688	117706351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496
Isoform_79770_3	chrX	-	2050	9	NIC	ENSMUSG00000031134.17	novel	2108	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	19.0028780714922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGAAGCTGCAAACCGA	NA	False	NA	-13	True	AATAAA	-18	NA	56438338	56431718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
Isoform_79771_20	chrX	-	2509	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-17	7	-17	-7	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58179813	58107511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_79772_15	chrX	-	2824	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-332	7	-332	-7	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58180128	58107511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_79773_5	chrX	-	2558	6	NNC	ENSMUSG00000031137.18	novel	2499	5	NA	NA	-88	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.9127805284481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGAAAACTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	58179884	58107511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_58108181_58108202_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
Isoform_79777_53	chrX	-	4308	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-81	0	-81	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224530	59101315	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_79781_21	chrX	-	3781	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	853	-3	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATACTCTGGTGTTCG	NA	False	NA	-8	True	AATAAA	-23	NA	59223596	59101321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_79783_3	chrX	-	4056	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	578	-3	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATACTCTGGTGTTCG	NA	False	NA	-8	True	AATAAA	-23	NA	59223871	59101321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_79784_3	chrX	-	3842	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4630	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_27	110.182004311385	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59229079	59101316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59228955
Isoform_79786_4	chrX	-	3705	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	814	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	124.493607402242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223635	59101316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
Isoform_79789_20	chrX	-	3236	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-83	56489	-83	-56486	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224532	59157804	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
Isoform_7979_553	chr11	-	1201	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	239	0	-6	0	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716679	117706351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
Isoform_79793_52	chrX	-	2355	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
Isoform_79794_7	chrX	-	2153	6	NIC	ENSMUSG00000073139.10	novel	736	6	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	87.3375062616285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520761	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69520583
Isoform_79795_20	chrX	-	2508	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	79.6773005455269	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510963_69513723_69513901_69520583
Isoform_79797_293	chrX	-	2513	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	0	-1206	0	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
Isoform_7980_58	chr11	-	1180	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	17	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716673	117706334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
Isoform_79800_9	chrX	-	2311	6	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	86.1519587705352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520761	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69520583
Isoform_79801_5	chrX	-	2257	6	NIC	ENSMUSG00000073139.10	novel	2429	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	103.207364078345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520772	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510810_69513723_69513901_69520583
Isoform_79803_56	chrX	-	2429	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	81.8300678235085	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
Isoform_79805_21	chrX	-	3353	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	239	8	-5	-8	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTATGTCCTGATGTG	NA	False	NA	-7	True	NA	NA	NA	70536216	70463673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
Isoform_79808_6	chrX	-	3388	10	NNC	ENSMUSG00000035776.15	novel	3600	10	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.818702894417	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCTGATGTGATCTGT	NA	False	NA	-1	True	NA	NA	NA	70536247	70463667	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484750_70493544_70493614_70494216_70494280_70536127
Isoform_7981_19	chr11	-	1156	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	-16	15	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	399.354178643469	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGGGTTTCCCTAACT	NA	False	NA	-2	True	ATTAAA	-31	NA	117716709	117706336	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716426_117716459_117716539
Isoform_79810_103	chrX	-	1063	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	50	173	50	-1	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCATTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-16	NA	71961967	71957310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_79811_24	chrX	-	1237	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	50	-1	50	1	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTGGATTTTTACAG	NA	False	NA	-1	True	CATAAA	-18	NA	71961967	71957136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_79812_9	chrX	-	1133	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	-20	173	-20	-1	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCATTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-16	NA	71962037	71957310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
Isoform_79815_11	chrX	-	1176	9	FSM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	52	junction_8	89.7743699504486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126098	72117950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125988
Isoform_79816_17	chrX	-	1218	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_8	86.1506674379253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126116	72117950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125964
Isoform_79818_5	chrX	-	1117	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	103.290548938419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72126076	72117951	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125988
Isoform_79819_4	chrX	-	1176	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	100.580502583751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126110	72117950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125964
Isoform_7982_7	chr11	-	1090	5	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	509.684399898604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716673	117706334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716539
Isoform_79822_136	chrX	-	1594	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	-10	0	-4	0	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140633	72129898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
Isoform_79825_24	chrX	-	1601	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	44	0	8	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140657	72129900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_79826_136	chrX	-	1569	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	78	-2	0	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140623	72129898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_79828_4	chrX	-	1457	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	52	junction_7	514.238648640008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140633	72129898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72140586
Isoform_7983_8	chr11	-	2592	2	ISM	ENSMUSG00000025574.14	ENSMUST00000154790.2	786	3	-10	-864	0	864	intron_retention	FALSE	canonical	3	1136	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	117716673	117711601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_117713017_117715496
Isoform_79830_6	chrX	-	1491	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	14	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	633.664142032638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140651	72129901	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72136875_72136911_72137788_72137859_72138551_72138689_72140586
Isoform_79831_12	chrX	-	2405	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	586	junction_6	364.100344993643	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140646	72129900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_79832_4	chrX	-	3791	7	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	8	-3	intron_retention	FALSE	canonical	3	586	junction_5	385.386674508718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72140657	72129903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
Isoform_79833_5	chrX	-	1262	6	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_4	609.639434420051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72140623	72129903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72130791_72130883_72130980_72136875_72136911_72137788_72137859_72138551_72138689_72140586
Isoform_79835_24	chrX	-	1171	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	8	471	8	303	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161300	72151711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_79836_13	chrX	-	1119	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	303	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161325	72151711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
Isoform_79838_22	chrX	-	1076	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	4	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161304	72151711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
Isoform_79839_6	chrX	-	1019	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	-17	472	-17	302	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72161325	72151712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
Isoform_79841_26	chrX	-	2820	5	FSM	ENSMUSG00000071745.2	ENSMUST00000080324.4	2862	5	42	0	42	0	multi-exon	FALSE	canonical	3	17	junction_4	17.5499287747842	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72193014	72180837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192967
Isoform_79842_6	chrX	-	3011	5	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	477	6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	17.5499287747842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGATGTCTAAGACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	72192579	72180831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347
Isoform_79843_10	chrX	+	2821	5	NNC	ENSMUSG00000067771.10	novel	2773	4	NA	NA	679	15	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACAGCTCTACTGATCC	NA	False	NA	NA	False	AATAAA	-33	NA	72161331	72172883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_79844_6	chrX	+	2979	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	23.412817002659	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72160673	72172868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72160742_72161226_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_79845_12	chrX	-	1199	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	23	-2	23	2	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286713	72277682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
Isoform_79846_15	chrX	-	1222	9	NNC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	110.415125775412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72286713	72277683	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286557
Isoform_79847_3	chrX	-	1159	9	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	119.637407924946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286709	72277682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286219_72286267_72286581
Isoform_79849_250	chrX	-	1584	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308996	72298145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_7985_4292	chr11	-	2538	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	4	10	4	-10	multi-exon	FALSE	canonical	3	1319	junction_1	0	4292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117860008	117856914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117859145_117859700
Isoform_79851_58	chrX	-	2393	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308990	72298145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_79852_25	chrX	-	2421	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-20	2	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309016	72298143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_79853_7	chrX	-	1186	4	ISM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-25	6086	-25	-6086	5prime_fragment	FALSE	canonical	3	1081	junction_3	330.951154502695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAATTTCATG	NA	False	NA	NA	False	NA	NA	NA	72309021	72304231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_72305146_72306028_72306099_72306921_72307059_72308956
Isoform_79854_5	chrX	-	1178	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	10	468	10	-468	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGCTTTCATTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	72336572	72326969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
Isoform_79855_4	chrX	-	1082	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	10	-465	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTCATTTCTCATGA	NA	False	NA	NA	False	AATAAA	-22	NA	72336572	72326966	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
Isoform_79856_333	chrX	-	1357	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	22	1	22	-1	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCCTTCGGACTAC	NA	False	NA	-13	True	AATAAA	-16	NA	72502628	72480921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_79857_10	chrX	-	1022	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	6	4	6	-2	multi-exon	FALSE	canonical	3	30	junction_3	203.601462557506	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACGTTGCCTTCGGAC	NA	False	NA	-16	True	AATAAA	-13	NA	72502644	72480924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_79858_17	chrX	-	2166	9	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	35	-1	intron_retention	FALSE	canonical	3	498	junction_5	41.9545885452354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCCTTCGGACTAC	NA	False	NA	-13	True	AATAAA	-16	NA	72502615	72480921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
Isoform_79859_9	chrX	-	1639	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-146	-1	-42	1	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCTGAACTGGGT	NA	False	NA	-1	True	AATAAA	-16	NA	72703476	72699598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
Isoform_7986_132	chr11	-	2649	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	-106	9	-106	-9	multi-exon	FALSE	canonical	3	1319	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	117860118	117856913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117859145_117859700
Isoform_79860_3	chrX	-	1823	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-331	0	62	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703661	72699599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
Isoform_79861_18	chrX	-	1469	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	65	-2	65	1	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCTGAACTGGGT	NA	False	NA	-1	True	AATAAA	-16	NA	72703658	72699598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
Isoform_79863_7	chrX	-	1401	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	62	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_10	21.6148097377701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703661	72699599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
Isoform_79866_555	chrX	-	1195	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	23	1	23	-1	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTTGTGTCTAACTGA	NA	False	NA	-14	True	AATAAA	-16	NA	72759758	72729784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
Isoform_7987_76	chr11	-	2761	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	-218	9	47	-9	multi-exon	FALSE	canonical	3	1319	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	117860230	117856913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_117859145_117859700
Isoform_79875_16	chrX	-	1296	13	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	11	4	combination_of_known_junctions	TRUE	canonical	2	205	junction_10	516.424862771816	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTCTTCCCTTACTC	NA	False	NA	-24	True	AATAAA	-23	NA	72830217	72822564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830133
Isoform_79876_224	chrX	-	1298	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	32	1	32	-1	multi-exon	FALSE	canonical	2	205	junction_10	445.162891535222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830471	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
Isoform_79878_47	chrX	-	1283	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	210	junction_11	355.941284971423	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830221	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830133
Isoform_79879_583	chrX	-	1286	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830471	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_79880_318	chrX	-	1315	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830500	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_79881_23	chrX	-	1382	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-64	-1	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830567	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
Isoform_79886_46	chrX	-	2047	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	32	1	32	-1	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCCCTGTTCTTCCCT	NA	False	NA	-29	True	AATAAA	-18	NA	72830471	72822569	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_79892_39	chrX	-	2314	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	32	-2	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830471	72822570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_79893_23	chrX	-	2342	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830500	72822571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
Isoform_79895_24	chrX	-	3175	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-2	180	-2	0	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954938	72938137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
Isoform_79896_6	chrX	-	3370	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-14	-3	-8	3	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGGTATGTCTATGGGT	NA	False	NA	NA	False	AATACA	-31	NA	72954950	72937954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
Isoform_79898_4	chrX	-	642	2	NIC	ENSMUSG00000031389.18	novel	555	4	NA	NA	-2	-20	intron_retention	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTAACCGGAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-25	NA	72954938	72950010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72950483_72954768
Isoform_79900_70	chrX	-	917	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	38	7	0	-5	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATAGTGGGGTATGC	NA	False	NA	-8	True	AATAAA	-31	NA	72965512	72960485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_79901_44	chrX	-	1008	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	-18	-11	0	-1	multi-exon	FALSE	canonical	3	116	junction_1	343.561063104701	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTGGGGTATGCTTTT	NA	False	NA	-4	True	AATAAA	-35	NA	72965512	72960481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_79903_7	chrX	-	990	8	NIC	ENSMUSG00000031388.15	novel	1031	8	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	364.889359803707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATAGTGGGGTATGC	NA	False	NA	-8	True	AATAAA	-31	NA	72965500	72960485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72960893_72961448_72961534_72963107_72963147_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_79904_424	chrX	-	1008	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	18	5	0	-5	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATAGTGGGGTATGC	NA	False	NA	-8	True	AATAAA	-31	NA	72965512	72960485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
Isoform_79911_572	chrX	-	1341	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	77	0	-17	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974379	72965726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
Isoform_79913_82	chrX	-	1299	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	19	0	-17	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974379	72965726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
Isoform_79914_20	chrX	-	1293	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_8	580.11297324607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974407	72965726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
Isoform_79919_4	chrX	-	2483	6	ISM	ENSMUSG00000031386.15	ENSMUST00000128136.8	3480	10	2203	5	382	-3	3prime_fragment	FALSE	canonical	3	450	junction_2	21.6573313222105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATCTGGTATTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	72990656	72986405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540
Isoform_79920_4	chrX	-	2757	7	ISM	ENSMUSG00000031386.15	ENSMUST00000128136.8	3480	10	1787	7	-34	-5	3prime_fragment	FALSE	canonical	3	450	junction_2	19.9227675453654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACCATCTGGTATTT	NA	False	NA	-20	True	ATTAAA	-13	NA	72991072	72986407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796
Isoform_79921_3	chrX	-	3628	10	ISM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	16946	10	-158	-5	3prime_fragment	FALSE	canonical	3	318	junction_8	69.6052360737961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACCATCTGGTATTT	NA	False	NA	-20	True	ATTAAA	-13	NA	72993017	72986407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803
Isoform_79922_3	chrX	-	8137	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-7	8	-7	-3	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATCTGGTATTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	73009970	72986405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
Isoform_79930_19	chrX	-	2683	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	78	1064	-6	-11	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	73067443	73058587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_79935_45	chrX	-	2675	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	92	1068	0	-11	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	73067432	73058587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
Isoform_79942_61	chrX	-	1813	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	31	8694	-26	2	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129244	73078891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
Isoform_79943_32	chrX	-	1844	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	-3	8697	-3	0	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	73129278	73078894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
Isoform_79944_76	chrX	-	1735	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	6	-2	6	2	multi-exon	FALSE	canonical	3	119	junction_2	51.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129290	73078891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73080101_73080587_73080939_73129115
Isoform_79945_98	chrX	-	1687	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	54	-2	-24	2	multi-exon	FALSE	canonical	3	119	junction_2	51.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129242	73078891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73080101_73080587_73080939_73129115
Isoform_79946_4	chrX	-	2014	10	ISM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	18189	4	-241	-2	3prime_fragment	FALSE	canonical	3	605	junction_7	61.0326769388414	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73271815	73267070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691
Isoform_79949_4	chrX	-	2500	13	ISM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	17289	4	-46	-2	3prime_fragment	FALSE	canonical	3	605	junction_7	60.5683154242656	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73272715	73267070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624
Isoform_79950_3	chrX	-	3745	21	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	12274	2	1702	-2	3prime_fragment	FALSE	canonical	3	444	junction_18	76.7230571601523	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73277866	73267070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768
Isoform_79951_7	chrX	-	1544	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	81	0	20	0	multi-exon	FALSE	canonical	2	3	junction_5	3.01018678652935	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	73325261	73316822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
Isoform_79952_48	chrX	-	744	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	-7	9	-7	-9	multi-exon	FALSE	canonical	3	109	junction_1	662	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTATTTTCAGCCT	4529	False	NA	-28	True	AATAAA	-20	NA	73397188	73395776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73396105_73396450_73396609_73396930
Isoform_79954_488	chrX	-	753	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	8	0	8	0	multi-exon	FALSE	canonical	3	1433	junction_2	31	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	4501	False	NA	-18	True	AATAAA	-30	NA	73397216	73395766	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73396105_73396479_73396609_73396930
Isoform_79955_23	chrX	-	792	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	-34	3	-34	-2	multi-exon	FALSE	canonical	3	1433	junction_2	31	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCAGCCTCTAAATT	4459	False	NA	-21	True	AATAAA	-27	NA	73397258	73395769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73396105_73396479_73396609_73396930
Isoform_79957_364	chrX	-	2307	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	135	0	20	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412144	73409323	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_79958_8	chrX	-	2444	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	147	-149	-13	149	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGGTGTGTGCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	73412132	73409174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_79960_379	chrX	-	612	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	147	1683	-13	64	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGCTCATAGTGATAAT	NA	False	NA	-1	True	ATTAAA	-18	NA	73412132	73411006	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
Isoform_79963_39	chrX	-	1948	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	53	22	9	-22	multi-exon	FALSE	canonical	3	11	junction_2	8.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	AATATA	-9	NA	73416902	73412844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73414618_73416219_73416289_73416796
Isoform_79965_6	chrX	-	1853	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	35	22	-24	-22	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	NA	False	NA	NA	False	AATATA	-9	NA	73416876	73412844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73414618_73416796
Isoform_79966_50	chrX	-	1843	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	32	24	15	18	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGTATTCAGATGTC	NA	False	NA	-30	True	AATAAA	-19	NA	73436846	73428348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_79967_34	chrX	-	1795	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	104	0	14	0	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436774	73428324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_79970_14	chrX	-	1484	10	NIC	ENSMUSG00000031399.16	novel	814	9	NA	NA	23	18	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.9828491381487	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGTATTCAGATGTC	NA	False	NA	-30	True	AATAAA	-19	NA	73436838	73428348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
Isoform_79972_3	chrX	-	1902	9	NNC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	31	18	intron_retention	FALSE	canonical	0	0	junction_3	42.6731765867037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGTATTCAGATGTC	NA	False	NA	-30	True	AATAAA	-19	NA	73436830	73428348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_73429042_73430027_73430155_73430237_73430398_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
Isoform_79974_31	chrX	-	2409	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	239	4	-75	-4	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACCTGTCTCCTTGTTCT	NA	False	NA	-10	True	ATTAAA	-14	NA	73472561	73453092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_79975_290	chrX	-	2334	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	315	3	1	-3	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	-9	True	ATTAAA	-15	NA	73472485	73453091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_79977_4	chrX	-	2338	13	NIC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	87.1626831467075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTCTCCTTGTTCTTT	NA	False	NA	-8	True	ATTAAA	-16	NA	73472485	73453090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456087_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
Isoform_79978_16	chrX	-	912	3	FSM	ENSMUSG00000079536.2	ENSMUST00000114125.2	627	3	-119	-166	-119	166	multi-exon	FALSE	canonical	3	15	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTCATCTGATTTT	NA	False	NA	NA	False	AATAAA	-9	NA	73525124	73523726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_73524038_73524213_73524343_73524652
Isoform_79979_4	chrX	-	1720	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	-30	-940	-30	1	multi-exon	FALSE	canonical	3	11	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTTCTTAGTTTTTT	2149	False	NA	NA	False	ATTAAA	-21	NA	74012761	74010447	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_74011592_74011767_74011897_74012314
Isoform_79980_124	chrX	-	1967	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	12	546	12	369	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACCCGTGACCCTGTAA	NA	False	NA	-11	True	AATAAA	-16	NA	74174610	74153884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
Isoform_79984_8	chrX	-	684	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	-2	-175	-2	-5	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTTTGGTTTGTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	74460192	74448456	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
Isoform_79985_3	chrX	-	759	4	NNC	ENSMUSG00000090110.9	novel	507	4	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	27.1825107171668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTGGTTTGTTACT	NA	False	NA	NA	False	AATAAA	-13	NA	74460140	74448455	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_74448825_74453151_74453220_74459620_74459820_74460017
Isoform_79986_3	chrX	-	1474	6	FSM	ENSMUSG00000031200.17	ENSMUST00000114081.2	980	6	11	-505	-9	172	multi-exon	FALSE	canonical	3	22	junction_1	14.0370937162933	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTTTTGCGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	74460183	74453877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
Isoform_79988_16	chrX	-	3092	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	46	11	-37	-2	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTCTACTCTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	74918742	74829270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
Isoform_79989_13	chrX	-	3174	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	340	632	34	-632	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76839544	76805648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
Isoform_79990_12	chrX	-	3208	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	306	632	0	-632	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76839578	76805648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
Isoform_79993_5	chrX	-	2938	8	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	6	-632	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	18.3180517634426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76839572	76805648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76829733_76829903_76839153
Isoform_79994_4	chrX	-	3099	8	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	13	-632	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	17.4086537242199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76839565	76805648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76816721_76816842_76825643_76825908_76829733_76829903_76839153
Isoform_79995_165	chrX	-	1724	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	0	1	0	-1	multi-exon	FALSE	canonical	3	241	junction_2	42	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78679188	78666837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_78668390_78671446_78671527_78679096
Isoform_79996_19	chrX	-	1943	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-90	1	-90	-1	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78715131	78666837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
Isoform_80000_5	chrX	-	1896	4	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	145.164274760241	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78679163	78666837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78679096
Isoform_80001_6	chrX	-	1986	5	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	126.903506649738	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCTCTCTTTTATTA	NA	False	NA	-1	True	AATAAA	-21	NA	78714977	78666837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78685326_78685395_78714888
Isoform_80002_3	chrX	-	3722	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-36	-659	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820295	84746201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_80004_17	chrX	-	3572	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	15	658	2	-658	multi-exon	TRUE	canonical	3	125	junction_19	13.2977827073068	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820228	84746200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_80005_6	chrX	-	3636	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-50	659	-34	-659	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820293	84746201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_8001_4	chr11	-	1989	9	ISM	ENSMUSG00000033987.17	ENSMUST00000132685.9	13612	81	96152	3	54712	-3	3prime_fragment	FALSE	canonical	1	2	junction_7	3.45506874027131	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCCGTCTGATGCACT	NA	False	NA	NA	False	ATTAAA	-14	NA	117925308	117913904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074
Isoform_80014_5	chrX	-	3483	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	197	660	2	-660	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCATTTCTCATTTCC	NA	False	NA	-7	True	AATAAA	-17	NA	84820228	84746202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
Isoform_80015_5	chrX	-	2429	3	FSM	ENSMUSG00000035427.19	ENSMUST00000113969.10	2403	3	-31	5	-31	-3	multi-exon	FALSE	canonical	3	26	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGAAAAAGAGATTTTAT	NA	False	NA	NA	False	AATAAA	-7	NA	85299856	85293864	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_85296089_85298945_85299028_85299733
Isoform_80016_26	chrX	-	5333	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-1	14	-1	-14	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAGGAAAACCAGTTAC	4276	False	NA	-16	True	AATAAA	-5	NA	92675762	92348386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_80017_4	chrX	-	5217	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	3	18	junction_25	84.0379408969787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAACCAGTTACTGTG	4279	False	NA	-12	True	AATAAA	-9	NA	92675759	92348382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
Isoform_8002_3	chr11	-	2091	10	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	50838	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	3.80383172636082	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCCGTCTGATGCACT	NA	False	NA	NA	False	ATTAAA	-14	NA	117929182	117913904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074_117925203_117928974
Isoform_80022_22	chrX	-	2310	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	26	-221	26	221	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTTTCATTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	92875781	92807991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_80023_342	chrX	-	2075	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	26	14	26	-14	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTTCTCACTTAACAC	NA	False	NA	-16	True	ATTAAA	-19	NA	92875781	92808226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_80024_11	chrX	-	2118	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-22	19	-22	-19	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGAATTTCTCACTT	NA	False	NA	-21	True	ATTAAA	-14	NA	92875829	92808231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_80026_9	chrX	-	2520	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	27	-432	27	432	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACCTGGCTCTCAATTT	NA	False	NA	NA	False	NA	NA	NA	92875780	92807780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_80028_7	chrX	-	1764	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-60	411	-60	78	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTTGCTGTGGCA	NA	False	NA	-7	True	ACTAAA	-16	NA	92875867	92808623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_8003_85	chr11	-	3150	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-10	-5	-10	-4	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTCTGCTCTGCTG	8622	False	NA	-1	True	AATAAA	-21	NA	118139396	118054995	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
Isoform_80030_8	chrX	-	1975	11	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	7	-19	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	155.054474298551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGAATTTCTCACTT	NA	False	NA	-21	True	ATTAAA	-14	NA	92875800	92808231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_92808862_92812494_92812635_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
Isoform_80033_6	chrX	-	1326	8	ISM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	276	6140	1	1512	5prime_fragment	FALSE	canonical	3	51	junction_7	25.4726744347181	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAACCAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	93166737	93124376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_80034_3	chrX	-	1592	8	ISM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	10	6140	10	1512	5prime_fragment	FALSE	canonical	3	51	junction_7	25.4726744347181	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAACCAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	93167003	93124376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
Isoform_80036_3	chrX	-	1281	7	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26932	1512	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	42.252218876646	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAACCAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	93194240	93124376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
Isoform_80038_467	chrX	-	3584	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	63	0	5	0	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256252	93232312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
Isoform_80039_68	chrX	-	3621	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	18	8	18	-8	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATTAATTGTGCCC	NA	False	NA	-10	True	AATAAA	-13	NA	93256297	93232320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
Isoform_8004_18	chr11	-	3181	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-44	-2	-12	2	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCATGTTCTGCTCTG	8588	False	NA	-4	True	AATAAA	-18	NA	118139430	118054998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
Isoform_80044_11	chrX	-	3678	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256552	93232312	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
Isoform_8005_4	chr11	-	5560	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	89	6	38	-3	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	118180968	118150482	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_80050_2688	chrX	-	2697	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	123	1	-17	-1	multi-exon	TRUE	canonical	3	1240	junction_10	166.264514821681	2688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585626	93579080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
Isoform_80051_43	chrX	-	2760	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	60	1	60	-1	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585689	93579080	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
Isoform_80054_62	chrX	-	2622	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_11	424.670839962022	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585626	93579081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
Isoform_80059_55	chrX	-	1439	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	48	7009	48	-7009	multi-exon	FALSE	canonical	3	18	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	94488430	94470932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_94472205_94488263
Isoform_80060_18	chrX	-	2120	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	103	-4	2	1	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTAACTGAGTGCATTC	984	False	NA	NA	False	AATAAA	-19	NA	94702012	94682800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
Isoform_80062_127	chrX	-	2533	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10	-13	10	13	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000509	94978927	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_80063_15	chrX	-	2576	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	-27	-19	22	19	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGAGGGATGTGTAAG	NA	False	NA	-17	True	AATAAA	-23	NA	95000546	94978921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
Isoform_8007_4	chr11	-	5616	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	37	2	-14	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTGTGTCTGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	118181020	118150478	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_80074_10	chrX	-	2129	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	36	-12	-8	12	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCATAATTGTATCT	NA	False	NA	NA	False	ATTAAA	-29	NA	96420786	96381384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_80075_7	chrX	-	2178	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-17	-8	-17	8	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTAAAAAGCATAATTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	96420839	96381388	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
Isoform_80076_3	chrX	-	2189	7	ISM	ENSMUSG00000034457.11	ENSMUST00000113832.2	1433	8	-43	639	-21	14	5prime_fragment	FALSE	canonical	3	11	junction_6	38.9419083022676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATAATTGTATCTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	96420799	96381382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
Isoform_80078_24	chrX	-	1746	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-11	373	-6	3	multi-exon	FALSE	canonical	3	92	junction_1	143.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGCATCATTTGGATT	NA	False	NA	-1	True	ATTAAA	-25	NA	98514304	98509716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_98511189_98511728_98511921_98514222
Isoform_8008_4	chr11	-	4361	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	91	1203	40	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118180966	118151679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_80083_177	chrX	-	2303	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	20	343	20	3	multi-exon	FALSE	canonical	3	379	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGCATCATTTGGATT	NA	False	NA	-1	True	ATTAAA	-25	NA	98514321	98509716	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_98511921_98514222
Isoform_80085_36	chrX	-	2647	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	20	-1	20	1	multi-exon	FALSE	canonical	3	379	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	AAAACA	-21	NA	98514321	98509372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_98511921_98514222
Isoform_80092_86	chrX	-	2564	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	1	-2	1	2	multi-exon	FALSE	canonical	3	84	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGCATCATTTGGAT	NA	False	NA	-2	True	ATTAAA	-24	NA	98514297	98509717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_98512207_98514222
Isoform_80093_9	chrX	-	2943	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-33	-347	10	1	multi-exon	FALSE	canonical	3	84	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	AAAACA	-21	NA	98514331	98509372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_98512207_98514222
Isoform_80096_55	chrX	-	1018	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	46	-23	46	1	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACTGCTTGAATATAAA	NA	False	NA	-6	True	AATAAA	-15	NA	99669495	99666490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
Isoform_80098_128	chrX	-	980	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	649	-3	16	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669525	99666488	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_801_6	chr10	-	1442	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	36	-182	2	1	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGGCTTTTTACCCAG	6593	False	NA	86	True	NA	NA	NA	40122996	40099240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_8010_13	chr11	-	3570	19	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	37	2737	-14	0	5prime_fragment	FALSE	canonical	3	124	junction_4	13.8996624881308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTGCGAGGCTGTGACT	NA	False	NA	0	True	NA	NA	NA	118181020	118153213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_80101_8	chrX	-	1068	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	558	0	-72	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99669616	99666491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_80103_5	chrX	-	1359	5	NIC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	13	3	intron_retention	FALSE	canonical	3	301	junction_4	119.69962405956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTTGAATATAAAATGCC	NA	False	NA	-1	True	AATAAA	-20	NA	99669528	99666485	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
Isoform_80104_13	chrX	-	3256	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-5	-1	-5	1	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	-4	True	AATAAA	-17	NA	100103250	99882252	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
Isoform_8011_20	chr11	-	3473	19	ISM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	134	2737	-25	0	5prime_fragment	FALSE	canonical	3	124	junction_4	13.8996624881308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTGCGAGGCTGTGACT	NA	False	NA	0	True	NA	NA	NA	118180923	118153213	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
Isoform_80110_47	chrX	-	2391	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	-20	0	0	0	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128978	100122826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
Isoform_80111_26	chrX	-	2372	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	505.338500413337	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128978	100122826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877
Isoform_80113_828	chrX	-	2233	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	0	-1	0	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128978	100122826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_80114_82	chrX	-	2266	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	-33	-1	0	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100129011	100122826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_80115_13	chrX	-	2314	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	0	-82	0	70	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGTGTCTTGTGTCTTT	NA	False	NA	NA	False	TATAAA	-29	NA	100128978	100122745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
Isoform_80116_43	chrX	-	2164	12	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	409.125251083797	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128791	100122826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
Isoform_80118_38	chrX	-	1097	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	18	-1	14	1	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCAGCTAGTTTCTC	NA	False	NA	-10	True	NA	NA	NA	100266141	100141390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_80121_3	chrX	-	768	3	NIC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	35	5	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	95.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTAGTTTCTCTTAT	NA	False	NA	-6	True	NA	NA	NA	100266120	100141386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100141834_100145973_100146042_100265867
Isoform_80122_3	chrX	-	703	3	NIC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	96	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	95.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCAGCTAGTTTCTC	NA	False	NA	-10	True	NA	NA	NA	100266059	100141390	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100141834_100145973_100146042_100265867
Isoform_80123_39	chrX	-	957	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	44	1	30	-1	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTTTCTCCTTA	NA	False	NA	-16	True	ATTAAA	-14	NA	100266125	100255565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_80125_89	chrX	-	2422	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	-8	1	-4	-1	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTTTCTCCTTA	NA	False	NA	-16	True	ATTAAA	-14	NA	100266163	100255565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
Isoform_80128_5	chrX	-	1595	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	65	10	0	-10	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGAATGTCTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	100311796	100307993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
Isoform_80129_3	chrX	-	5474	25	FSM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	89	1	4	-1	multi-exon	FALSE	canonical	3	54	junction_18	23.7530334320108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463431	100447990	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
Isoform_80130_4	chrX	-	5495	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	3	54	junction_18	23.4366388730694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTTCTTTGCTTTCTC	NA	False	NA	-9	True	AATAAA	-7	NA	100463452	100447996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_80131_3	chrX	-	1906	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	-54	7	-3	1	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCAGCCTCAGCCTCT	NA	False	NA	-8	True	NA	NA	NA	100463469	100458542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
Isoform_80132_12	chrX	-	2072	7	FSM	ENSMUSG00000045010.15	ENSMUST00000124577.8	1190	7	-1174	292	-14	3	multi-exon	FALSE	canonical	3	11	junction_2	111.484926734016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTTGCAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	100838043	100833950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100834130_100834212_100834255_100834440_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_80134_205	chrX	-	2004	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-12	-1	-12	1	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_80135_90	chrX	-	2273	6	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-31	1	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838060	100833952	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_80136_50	chrX	-	2561	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	19	-1	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838010	100833954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
Isoform_80137_11	chrX	-	2891	4	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	142	junction_3	69.5317673201729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838064	100833954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_100834130_100834212_100835250_100835786_100835944_100836542
Isoform_80138_89	chrX	-	4040	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	21	1241	21	-1241	multi-exon	FALSE	canonical	3	249	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200676	101186562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101190440_101200513
Isoform_80139_55	chrX	-	4074	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-11	1239	-11	-1239	multi-exon	FALSE	canonical	3	249	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCCATTCATTTTCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	101200708	101186560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101190440_101200513
Isoform_80142_5	chrX	-	5282	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	22	-2	22	2	multi-exon	FALSE	canonical	3	249	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCGGTTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	101200675	101185319	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101190440_101200513
Isoform_80156_4033	chrX	-	899	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	70	6	12	-6	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	4033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTACTTTTGGTTTGCTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	101232930	101228552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
Isoform_80157_393	chrX	-	978	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	-9	6	-9	-6	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTACTTTTGGTTTGCTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	101233009	101228552	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
Isoform_80163_3	chrX	-	942	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	-8	-327	-8	-6	multi-exon	FALSE	canonical	3	12	junction_2	97.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATAACTGCCTGGGTGT	NA	False	NA	-6	True	AATAAA	-14	NA	101294560	101290992	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101291615_101292168_101292294_101294365
Isoform_80164_6	chrX	-	1073	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	37	-20	37	-3	multi-exon	FALSE	canonical	3	50	junction_2	78.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAACTGCCTGGGTGTGTT	NA	False	NA	-3	True	AATAAA	-17	NA	101295421	101290989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101291615_101292168_101292294_101295098
Isoform_80166_12	chrX	-	1013	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	93	-16	93	-7	multi-exon	FALSE	canonical	3	50	junction_2	78.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATAACTGCCTGGGTG	NA	False	NA	-7	True	AATAAA	-13	NA	101295365	101290993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101291615_101292168_101292294_101295098
Isoform_80167_73	chrX	-	793	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	101	7	101	-7	multi-exon	FALSE	canonical	3	131	junction_2	38	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATAACTGCCTGGGTG	NA	False	NA	-7	True	AATAAA	-13	NA	101295686	101290993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101291615_101292168_101292294_101295639
Isoform_80168_11	chrX	-	1722	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	213	1	0	-1	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCGTCCCACCGCTCTG	NA	False	NA	-2	True	AATAAA	-14	NA	101548752	101328245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_80169_11	chrX	-	4726	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	6	1383	6	-1383	multi-exon	TRUE	canonical	3	40	junction_24	10.1886502418132	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAAGAATTTCTGTGTT	NA	False	NA	-8	True	ATTAAA	-20	NA	101687846	101558963	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
Isoform_8017_5	chr11	-	3530	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	180	-1	180	1	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGGTTGATTCCTTG	2446	False	NA	-6	True	AATAAA	-12	NA	118246152	118191893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
Isoform_80170_4	chrX	-	518	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-180	-1	-180	1	multi-exon	FALSE	canonical	3	77	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTGACTGTGTGA	3447	False	NA	NA	False	AATAAA	-17	NA	101730758	101729896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101730044_101730198_101730354_101730542
Isoform_80171_9	chrX	-	395	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-57	-1	-57	1	multi-exon	FALSE	canonical	3	77	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTGACTGTGTGA	3570	False	NA	NA	False	AATAAA	-17	NA	101730635	101729896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101730044_101730198_101730354_101730542
Isoform_80172_8	chrX	-	1617	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101898222	101891238	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
Isoform_80174_5	chrX	+	1424	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	52.0670682085782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCAGGTCTTCACTG	NA	False	NA	NA	False	AATAAA	-15	NA	101846568	101853551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_101846761_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_80175_8	chrX	-	1474	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTACACCTTCCCCAG	NA	False	NA	NA	False	AATAAA	-37	NA	101898222	101891219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
Isoform_80176_4	chrX	+	1396	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	59	6	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	44.698993277254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846627	101853554	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_101846789_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_80177_9	chrX	-	2217	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	4	5218	4	-5218	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGAGTCATTGCTTTCT	2377	False	NA	NA	False	TATAAA	-11	NA	103024886	103005986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
Isoform_80178_8	chrX	-	2202	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	9	5218	9	-5218	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGAGTCATTGCTTTCT	2382	False	NA	NA	False	TATAAA	-11	NA	103024881	103005986	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
Isoform_80179_9	chrX	-	2466	4	FSM	ENSMUSG00000046449.16	ENSMUST00000056502.7	5211	4	-82	2827	-41	-2827	multi-exon	FALSE	canonical	1	4	junction_3	9.03081145609604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAGCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103244832	103130146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103131837_103132486_103132613_103143231_103143288_103244238
Isoform_8018_15	chr11	-	1006	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	180	2523	180	109	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTCACGCTAGTG	2446	False	NA	-10	True	AATAAA	-13	NA	118246152	118194417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
Isoform_80185_3	chrX	-	2393	3	FSM	ENSMUSG00000046449.16	ENSMUST00000118314.8	11476	3	-24	9107	-24	-2827	multi-exon	FALSE	canonical	1	3	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAGCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103244815	103130146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103131837_103132486_103132613_103244238
Isoform_8019_4	chr11	-	2935	6	FSM	ENSMUSG00000025575.15	ENSMUST00000106289.9	1600	6	20	-1355	20	0	multi-exon	FALSE	canonical	2	2	junction_2	74.5133545077659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9041	False	NA	-1	True	AATAAA	-17	NA	118309829	118297114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118300905_118301017_118301678_118302338_118308399_118308481_118309755
Isoform_80192_5	chrX	-	3312	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	252	1945	252	-1945	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCTATTCTTGTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	103714418	103582519	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_80193_3	chrX	-	3518	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	56	1935	56	-1935	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTTAGTATCTTGA	NA	False	NA	NA	False	AATAAA	-42	NA	103714614	103582509	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_80194_3	chrX	-	3948	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-13	1574	-13	-1574	multi-exon	TRUE	canonical	3	93	junction_8	6.78841989185253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGCAAACAAATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	103714683	103582148	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_80195_3	chrX	-	1579	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-18	3948	-18	-3948	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAGTCTGGTAAAAG	NA	False	NA	-29	True	AATATA	-13	NA	103714688	103584522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_80196_5	chrX	-	1305	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	256	3948	256	-3948	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAGTCTGGTAAAAG	NA	False	NA	-29	True	AATATA	-13	NA	103714414	103584522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
Isoform_80197_18	chrX	-	866	6	FSM	ENSMUSG00000087174.8	ENSMUST00000140954.8	3287	6	16	2405	0	-3	multi-exon	FALSE	canonical	3	59	junction_2	25.9183332797462	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTGTGGATTTACAT	NA	False	NA	-6	True	AATAAA	-14	NA	104113714	104087411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
Isoform_80198_4	chrX	-	747	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	-41	3	0	-3	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTGTGGATTTACAT	NA	False	NA	-6	True	AATAAA	-14	NA	104113702	104087411	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
Isoform_80199_9	chrX	-	761	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	16	2955	0	-6	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACAGTTGTGGATTTA	NA	False	NA	-9	True	AATAAA	-11	NA	104113714	104087414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
Isoform_802_5	chr10	-	1406	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-18	-92	-18	-89	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATGGGAAGTGCCTTT	6539	False	NA	-4	True	NA	NA	NA	40123050	40099330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
Isoform_8020_10	chr11	-	4120	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	62	0	-1	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9020	False	NA	-1	True	AATAAA	-17	NA	118309850	118297114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
Isoform_80200_5	chrX	-	651	5	NIC	ENSMUSG00000087174.8	novel	709	6	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	44.3790491110389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGTGGATTTACATG	NA	False	NA	-5	True	AATAAA	-15	NA	104113707	104087410	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_104087718_104110364_104110484_104112176_104112235_104113216_104113282_104113605
Isoform_80201_3	chrX	-	1653	11	FSM	ENSMUSG00000031232.18	ENSMUST00000113566.10	1608	11	-46	1	-46	-1	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	105055438	105014084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_80204_36	chrX	-	2036	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	96	2392	-17	2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	105055409	105014081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_80208_19	chrX	-	2119	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	13	2392	13	2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	105055492	105014081	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_80209_11	chrX	-	3365	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	85	1074	-28	-1074	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	105055420	105012763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_80214_4	chrX	-	3450	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	0	1074	0	-1074	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	105055505	105012763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
Isoform_80215_79	chrX	-	1632	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	16	96	16	-96	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTTTCATCACTTG	NA	False	NA	NA	False	AATAAA	-19	NA	106446966	106440800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
Isoform_80216_5	chrX	-	1232	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	16	4594	16	492	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTTCGCATAACCCA	NA	False	NA	NA	False	AATAAA	-21	NA	106859924	106830950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
Isoform_80219_3	chrX	-	655	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	10	1269	10	-1269	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGAAAGGAGACAATG	NA	False	NA	-53	True	NA	NA	NA	108057000	108049408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
Isoform_80220_3	chrX	-	619	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	-92	1407	-92	-1407	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTGGAGAAAGATGAAG	NA	False	NA	NA	False	NA	NA	NA	108057102	108049546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
Isoform_80221_10	chrX	-	4138	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	-3	0	-3	0	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110372895	110297889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_80222_8	chrX	-	4125	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	102	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373050	110297888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
Isoform_80223_20	chrX	-	4151	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372892	110297888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
Isoform_80227_3	chrX	-	4145	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	86	-7	combination_of_known_splicesites	FALSE	canonical	3	17	junction_23	77.9498166325199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110373066	110297896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372796_110372967
Isoform_80228_8	chrX	-	4295	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-59	-5	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCATTTAGTCTTGG	NA	False	NA	-12	True	ATTAAA	-25	NA	110373211	110297894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
Isoform_80230_27	chrX	-	4008	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	6	854	-2	-852	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	112095208	111951143	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
Isoform_80232_6	chrX	-	4140	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-482	4749	-482	-4744	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132588495	132488372	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
Isoform_80234_7	chrX	-	1737	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	23	5	23	-5	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATCGTTTTAATTT	NA	False	NA	-1	True	AATAAA	-37	NA	132799155	132791821	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
Isoform_80235_4	chrX	-	3136	14	FSM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	-14	6	-7	-6	multi-exon	FALSE	canonical	1	5	junction_12	15.8476474277441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACTGTATTCACTATC	NA	False	NA	-16	True	AATAAA	-12	NA	133177683	133123854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
Isoform_80236_17	chrX	-	3074	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	43	2	-12	-1	multi-exon	TRUE	canonical	1	13	junction_4	11.7686022959398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTATCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-21	NA	133177688	133123845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
Isoform_80237_7	chrX	-	1942	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGTCTCTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	133377248	133360866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
Isoform_80238_3	chrX	-	1820	13	NIC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	5.1010619809343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACGTCTCTAATTTC	NA	False	NA	NA	False	NA	NA	NA	133377235	133360867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371236_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
Isoform_80239_886	chrX	-	1195	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	225	1	225	-1	multi-exon	FALSE	canonical	3	1175	junction_1	0	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGACGAAGAGGCTT	NA	False	NA	-11	True	AATAAA	-15	NA	133442389	133438005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133439017_133442205
Isoform_8024_107	chr11	-	2823	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	50	0	21	0	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9042	False	NA	-1	True	AATAAA	-17	NA	118309828	118297114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
Isoform_80242_31	chr10	+	591	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	23	-1	23	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTGTATATGGGACTG	NA	False	NA	NA	False	GATAAA	-18	NA	11484989	11485580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_+_11485000_11485600
Isoform_80245_12	chrX	-	1451	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	-31	1	-31	-1	multi-exon	FALSE	canonical	3	1175	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGACGAAGAGGCTT	NA	False	NA	-11	True	AATAAA	-15	NA	133442645	133438005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133439017_133442205
Isoform_80247_39	chrX	-	1414	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	6	1	6	-1	multi-exon	FALSE	canonical	3	1175	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGACGAAGAGGCTT	NA	False	NA	-11	True	AATAAA	-15	NA	133442608	133438005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133439017_133442205
Isoform_80250_48	chrX	-	1382	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	52	1581	52	-1581	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTTCAACATAG	NA	False	NA	-18	True	AATAAA	-24	NA	133501702	133490515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_80251_14	chrX	-	1440	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	-6	1581	-6	-1581	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTTCAACATAG	NA	False	NA	-18	True	AATAAA	-24	NA	133501760	133490515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_80253_5	chrX	-	1499	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	46	1470	46	-1470	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTCTCTACTTCG	NA	False	NA	93	True	AAAACA	-8	NA	133501708	133490404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
Isoform_80254_31	chrX	-	3440	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	227	-1	2	-1	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTGTTCTGGTGCTTT	NA	False	NA	-2	True	AATAAA	-20	NA	133709743	133704894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
Isoform_80255_9	chrX	-	2341	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	34	0	34	0	multi-exon	TRUE	canonical	3	15	junction_3	7.21770310384392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865469	133845276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
Isoform_80257_3	chrX	-	2341	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	50	2	50	-2	multi-exon	FALSE	canonical	3	19	junction_3	6.66632652193486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTATGTCTTGAAGTG	NA	False	NA	-4	True	AATAAA	-16	NA	133865453	133845278	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
Isoform_80258_11	chrX	-	3830	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	29	-161	29	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078352	134068211	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
Isoform_80259_3	chrX	-	2205	22	NIC	ENSMUSG00000031410.15	novel	2233	23	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	1.0190921218587	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGATTCTTCTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	134499529	134480304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_134480575_134480703_134480765_134483832_134484016_134484471_134484539_134485101_134485145_134485235_134485352_134485452_134485512_134485645_134485754_134485889_134485946_134486029_134486099_134486514_134486552_134487985_134488096_134488266_134488375_134488481_134488571_134488715_134488786_134488930_134489012_134489121_134489227_134489324_134489409_134489679_134489831_134490065_134490220_134494561_134494643_134499426
Isoform_8026_22	chr11	-	2839	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	-8	-1355	-8	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8984	False	NA	-1	True	AATAAA	-17	NA	118309886	118297114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
Isoform_80260_6	chrX	-	496	5	FSM	ENSMUSG00000060726.11	ENSMUST00000113154.8	544	5	44	4	44	-4	multi-exon	FALSE	canonical	3	7	junction_4	4.9180788932265	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGGGCTTGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	134625966	134619419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_134619503_134620414_134620520_134621315_134621402_134624106_134624186_134625823
Isoform_80263_317	chrX	-	819	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	82	2	82	-2	multi-exon	FALSE	canonical	3	901	junction_2	34	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4238	False	NA	-2	True	AATAAA	-16	NA	134968903	134967314	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_134967957_134968348_134968422_134968799
Isoform_80264_7	chrX	-	3081	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAACATTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	134986003	134972855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
Isoform_80267_99	chrX	-	1111	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	139	0	-2	0	multi-exon	FALSE	canonical	3	703	junction_2	29	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135072952	135070829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135071799_135072384_135072455_135072880
Isoform_80269_20	chrX	-	904	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	103	243	12	-243	multi-exon	FALSE	canonical	3	703	junction_2	29	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGTGGTGTGTTTT	NA	False	NA	-14	True	NA	NA	NA	135072988	135071072	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135071799_135072384_135072455_135072880
Isoform_8027_3	chr11	-	2929	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	-98	-1355	-64	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8894	False	NA	-1	True	AATAAA	-17	NA	118309976	118297114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
Isoform_80277_258	chrX	-	842	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	21	3	-8	-2	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTCTGTACTCATCTT	NA	False	NA	-5	True	AATAAA	-14	NA	135116241	135114723	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135115333_135115652_135115730_135116085
Isoform_80278_1472	chrX	-	811	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	55	0	-15	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135115333_135115652_135115730_135116085
Isoform_8028_14	chr11	-	2976	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	21	-2	21	1	multi-exon	TRUE	canonical	3	9	junction_4	68.7786304021823	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTCTATGTTGGCT	9042	False	NA	0	True	AATAAA	-18	NA	118309828	118297113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
Isoform_80283_33	chrX	-	769	3	FSM	ENSMUSG00000050071.9	ENSMUST00000113118.2	754	3	26	-41	-15	0	multi-exon	FALSE	canonical	3	367	junction_1	2702.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116207	135114720	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135115333_135115694_135115730_135116085
Isoform_80288_1195	chrX	-	1781	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	74	4	-2	-4	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAAAAAAAATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	135642027	135633705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
Isoform_80289_42	chrX	-	1831	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	24	4	21	-4	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAAAAAAAATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	135642077	135633705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
Isoform_8029_4	chr11	-	2960	5	NIC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	71.8065978862667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTCTCTTGTCTATG	9010	False	NA	-6	True	AATAAA	-12	NA	118309860	118297119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309797
Isoform_80291_14	chrX	-	1807	4	FSM	ENSMUSG00000031422.17	ENSMUST00000033797.13	1996	4	174	15	-135	-4	multi-exon	FALSE	canonical	3	68	junction_3	1439.93989072075	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAAAAAAAATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	135642236	135633705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141
Isoform_80293_18	chrX	-	1806	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	4	15	0	-4	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAAAAAAAAATGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	135644435	135633705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
Isoform_80295_16	chrX	-	427	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	19	4	19	-4	multi-exon	FALSE	canonical	3	182	junction_2	19	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGGTGTGTAACTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	135858755	135856017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_135856232_135857483_135857589_135858647
Isoform_80296_13	chrX	-	423	3	NNC	ENSMUSG00000089768.3	novel	439	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877617	135874770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_135874979_135876146_135876252_135877507
Isoform_80297_3	chrX	-	3157	6	NIC	ENSMUSG00000044348.15	novel	3440	7	NA	NA	0	-267	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTTGTACTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	135939051	135902070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
Isoform_80298_10	chrX	-	1334	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	358	0	358	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020562	136016145	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
Isoform_80299_10	chrX	-	3857	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTAGGCTTGAATTTG	NA	False	NA	-14	True	AATAAA	-15	NA	138772423	138722654	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
Isoform_8030_4	chr11	-	2987	5	NNC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	71.3740148793663	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTCTATGTTGGCT	9004	False	NA	0	True	AATAAA	-18	NA	118309866	118297113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308606_118309755
Isoform_80302_4	chrX	-	1992	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	0	4	0	-4	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAGTGGCTGAACTGG	NA	False	NA	-13	True	AATAAA	-12	NA	138963317	138907557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
Isoform_80303_7	chrX	-	1877	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTGGCTGAACTGGGT	NA	False	NA	-11	True	AATAAA	-14	NA	138963346	138907555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
Isoform_80304_23	chrX	-	1775	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	7	8	7	1	multi-exon	FALSE	canonical	3	51	junction_2	112.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443410	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139441857_139442853_139442906_139443259
Isoform_80305_5	chrX	-	1839	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	-57	8	-57	1	multi-exon	FALSE	canonical	3	51	junction_2	112.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443474	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139441857_139442853_139442906_139443259
Isoform_80306_170	chrX	-	1964	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	2	8	2	1	multi-exon	FALSE	canonical	3	154	junction_2	61	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139443934	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139441857_139442853_139442906_139443594
Isoform_80307_3	chrX	-	1284	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	-45	735	-45	-1	multi-exon	FALSE	canonical	3	154	junction_2	61	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCATCGTTTTTCTAT	NA	False	NA	NA	False	TATAAA	-16	NA	139443981	139441011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139441857_139442853_139442906_139443594
Isoform_80309_13	chrX	-	2127	4	FSM	ENSMUSG00000031431.14	ENSMUST00000112996.9	1552	4	151	-726	151	1	multi-exon	FALSE	canonical	2	4	junction_3	117.12196871448	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139501257	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139441857_139442853_139442906_139498876_139499308_139501185
Isoform_8031_6	chr11	-	3535	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	41	4	-17	-4	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACACGTGTCTTGGCT	NA	False	NA	NA	False	AATATA	-10	NA	118931754	118927134	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_80310_33	chrX	-	2137	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1178	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139500230	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
Isoform_80311_5	chrX	-	2194	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1119	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATAAACTTGGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	139500289	139440286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
Isoform_80313_8	chrX	-	2224	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1178	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	116.190456674471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139500230	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500061
Isoform_80314_3	chrX	-	2349	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1450	2	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	116.499880782009	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGGTGTGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	139499958	139440283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499665
Isoform_80315_12	chrX	-	2289	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1509	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	116.499880782009	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTGGTGTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	139499899	139440284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499665
Isoform_80316_89	chrX	-	918	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	512	0	-512	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTGTGGCTGTCCTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	139857438	139849689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
Isoform_80317_46	chrX	-	1427	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	3	0	-3	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCTCCCAATTTCTCA	NA	False	NA	-11	True	AATAAA	-8	NA	139857438	139849180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
Isoform_80322_6	chrX	-	1355	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	32	3	-7	-3	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCTCCCAATTTCTCA	NA	False	NA	-11	True	AATAAA	-8	NA	139857445	139849180	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
Isoform_80323_3	chrX	-	2380	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	36	2543	36	135	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTTGAGTCTACTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	141173464	141103531	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
Isoform_80324_6	chrX	-	5254	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	25	1	-6	-1	multi-exon	TRUE	canonical	3	129	junction_14	18.9168942717585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTTTGTTTTTTCTTA	NA	False	NA	-4	True	AATAAA	-17	NA	141173506	141100989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
Isoform_80325_8	chrX	-	2704	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	31	2545	0	133	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAGTTGAGTCTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	141173500	141103533	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
Isoform_80327_16	chrX	-	3115	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	4	2318	4	-2318	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAAGGAAAGAG	NA	False	NA	26	True	NA	NA	NA	141749720	141636459	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
Isoform_80329_7	chrX	-	3537	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	17	7	17	-7	multi-exon	FALSE	canonical	3	10	junction_3	5.06348584365444	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGACCAGTCTTGACTAG	NA	False	NA	NA	False	AATAAA	-15	NA	142610393	142585233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
Isoform_8033_16	chr11	-	1373	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	72	2135	14	613	multi-exon	FALSE	canonical	3	19	junction_4	2.91547594742265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTCTTTTATTTAAAC	NA	False	NA	-2	True	AATATA	-15	NA	118931723	118929265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_80330_4	chrX	-	1307	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	4	5	0	1	multi-exon	FALSE	canonical	3	95	junction_2	83.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATCTGACTTGAGAG	NA	False	NA	NA	False	GATAAA	-16	NA	149242146	149191578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149192597_149203337_149203438_149241957
Isoform_80332_9	chrX	-	574	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	4	738	0	-145	multi-exon	FALSE	canonical	3	95	junction_2	83.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTCTTGGCTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	149242146	149192311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149192597_149203337_149203438_149241957
Isoform_80333_3	chrX	-	1205	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	-4	-337	-4	1	multi-exon	FALSE	canonical	0	0	junction_2	131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATCTGACTTGAGAG	NA	False	NA	NA	False	GATAAA	-16	NA	149242154	149191578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149192597_149203337_149203438_149242067
Isoform_80334_12	chrX	-	466	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	3	395	-1	-144	multi-exon	FALSE	canonical	0	0	junction_2	131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTCTTGGCTTTTGTT	NA	False	NA	NA	False	TATAAA	-20	NA	149242147	149192310	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149192597_149203337_149203438_149242067
Isoform_80335_3	chrX	-	1910	6	FSM	ENSMUSG00000025269.17	ENSMUST00000140207.8	795	6	-73	-1042	5	0	multi-exon	FALSE	canonical	1	1	junction_5	34.2963554915096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371140	149354502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370888
Isoform_80336_80	chrX	-	1876	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	9	-1	9	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371136	149354502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_80338_14	chrX	-	2222	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-337	-1	-337	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTTGAGTGGATATT	NA	False	NA	-3	True	AATAAA	-22	NA	149371482	149354502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
Isoform_80339_64	chrX	-	2221	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	763	1	14	-1	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149595940	149589417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
Isoform_8034_13	chr11	-	1405	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	40	2135	-18	613	multi-exon	FALSE	canonical	3	19	junction_4	2.91547594742265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTCTTTTATTTAAAC	NA	False	NA	-2	True	AATATA	-15	NA	118931755	118929265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
Isoform_80342_38	chrX	-	2139	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	14	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595940	149589416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
Isoform_80343_9	chrX	-	2192	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	-29	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595993	149589416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
Isoform_80344_4	chrX	-	2089	13	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_12	53.9265833229669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596142	149589416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596068
Isoform_80345_58	chrX	-	2103	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	4	0	4	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596699	149589416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
Isoform_80346_26	chrX	-	2074	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	58	51	-6	0	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149597283	149589416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
Isoform_80347_3	chrX	-	2557	11	FSM	ENSMUSG00000025268.16	ENSMUST00000145342.8	2572	11	12	3	2	0	multi-exon	FALSE	canonical	3	154	junction_8	16.0735808082704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATTGCCATTTTTG	NA	False	NA	-3	True	NA	NA	NA	149595952	149589419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
Isoform_8035_37	chr11	-	2649	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-53	2583	-53	1217	multi-exon	FALSE	canonical	3	62	junction_3	7	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTCCGAGATTAGC	NA	False	NA	-1	True	ATTAAA	-20	NA	118977100	118970981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
Isoform_80352_6	chrX	-	4829	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	34	6	34	-6	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTGAGACTG	NA	False	NA	-22	True	NA	NA	NA	149800284	149766142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
Isoform_80353_33	chrX	-	4802	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	61	6	61	-6	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTGAGACTG	NA	False	NA	-22	True	NA	NA	NA	149800257	149766142	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
Isoform_8036_51	chr11	-	2616	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-20	2583	-20	1217	multi-exon	FALSE	canonical	3	62	junction_3	7	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTCCGAGATTAGC	NA	False	NA	-1	True	ATTAAA	-20	NA	118977067	118970981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
Isoform_80363_20	chrX	-	3771	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	25	0	5	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879514	149870089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
Isoform_80366_4	chrX	-	3680	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	25	-2387	5	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879514	149870089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
Isoform_80367_6	chrX	-	1538	8	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	33.0126753640761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799281	150787576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799119
Isoform_80368_39	chrX	-	1509	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	0	-1	0	1	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799291	150787576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
Isoform_80370_5	chrX	-	1543	8	NNC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	-591	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	35.5969501101268	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGTCGTAAGAGTAC	NA	False	NA	-1	True	AATAAA	-18	NA	150799882	150787576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799715
Isoform_80372_3	chrX	-	464	4	FSM	ENSMUSG00000087403.10	ENSMUST00000141922.8	367	4	0	-97	0	1	multi-exon	FALSE	canonical	1	2	junction_1	33.5360502544153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	151110466	151098210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151098416_151103205_151103281_151110156_151110236_151110361
Isoform_80373_4	chrX	-	389	3	NIC	ENSMUSG00000087403.10	novel	367	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	151110466	151098210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_151098416_151110156_151110236_151110361
Isoform_80374_65	chrX	-	2711	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-17	2	-17	-2	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125438	151119852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
Isoform_80376_5	chrX	-	2727	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-20	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	69.392602871872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125441	151119852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123390_151124535
Isoform_80377_3	chrX	-	2824	6	FSM	ENSMUSG00000041096.14	ENSMUST00000149685.8	2804	6	-25	5	-25	-2	multi-exon	FALSE	canonical	3	155	junction_2	17.9844377170931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125446	151119852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123377_151124535
Isoform_80378_5	chrX	-	2826	6	NIC	ENSMUSG00000041096.14	novel	2804	6	NA	NA	-17	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	74.6763684173246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGCCTCTTGGAGTC	NA	False	NA	-9	True	AATAAA	-12	NA	151125438	151119855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123390_151124535
Isoform_80379_13	chrX	-	2714	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	44	junction_2	53.7339123211155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTCTTGGAGTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	151125438	151119852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_151120562_151121720_151122392_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
Isoform_80380_3	chrX	-	7216	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-212	490	-208	-7	multi-exon	TRUE	canonical	3	27	junction_9	12.3987255418341	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAAGTAGAATGTCTTT	NA	False	NA	-9	True	AATAAA	-14	NA	151552669	151392994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
Isoform_80381_14	chrX	-	1651	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	-2	-3	-2	3	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTAGTTTCTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	153778848	153768767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
Isoform_80382_16	chrX	-	1778	5	NNC	ENSMUSG00000079350.3	novel	1646	4	NA	NA	-25	3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	13.4233937586588	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTAGTTTCTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	153778871	153768767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_153770173_153771107_153771197_153777179_153777280_153777995_153778100_153778791
Isoform_80383_4	chrX	-	1727	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	-24	-18	-24	18	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTGCACTGGTGCCC	NA	False	NA	NA	False	ATTAAA	-37	NA	153816312	153810178	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
Isoform_80385_21	chrX	-	1642	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	3	-285	3	1	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846138	153836055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
Isoform_80386_7	chrX	-	1746	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	19.2272592950738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846138	153836055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153845292_153845397_153846086
Isoform_80387_7	chrX	-	1556	3	NIC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTAGTTTCTTTTTG	NA	False	NA	1	True	AATAAA	-19	NA	153846141	153836055	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_153837456_153844474_153844576_153846086
Isoform_80388_10	chrX	-	1163	7	FSM	ENSMUSG00000025283.16	ENSMUST00000152463.8	1272	7	101	8	-3	-8	multi-exon	FALSE	canonical	3	28	junction_4	540.496993516153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999344	153996135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998116_153998227_153998596_153998681_153998780_153998833_153999098
Isoform_80389_494	chrX	-	1050	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	104	8	0	-8	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999341	153996135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
Isoform_80390_103	chrX	-	1101	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	53	8	-51	-8	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999392	153996135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
Isoform_80391_36	chrX	-	1155	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	-1	8	-1	-8	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999446	153996135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
Isoform_80392_7	chrX	-	2519	5	NIC	ENSMUSG00000025283.16	novel	1352	6	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	1003	junction_1	114.726577130149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGCCTGAGCATTT	NA	False	NA	-15	True	AATAAA	-16	NA	153999344	153996135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_153996664_153996892_153996934_153997028_153998681_153998780_153998833_153999098
Isoform_80396_1115	chrX	-	961	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	29	0	29	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	-1	True	AATAAA	-22	NA	154121434	154106913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
Isoform_80397_227	chrX	-	1002	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	-14	2	-7	-2	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGTTTGCCATTGTAAT	NA	False	NA	-3	True	AATAAA	-20	NA	154121477	154106915	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
Isoform_804_4	chr10	-	965	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTCGGTTTCCTGA	6593	False	NA	-5	True	ACTAAA	-17	NA	40122996	40099679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
Isoform_8040_15	chr11	-	2864	12	FSM	ENSMUSG00000039976.5	ENSMUST00000207655.2	2855	12	-10	1	-10	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.02055552462662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119297	119037961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047634_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_80400_3	chrX	-	2432	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	1	41	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACGGTGTTTGTCCCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	156275039	156228650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
Isoform_80401_168	chrX	-	355	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	0	7524	0	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275040	156249393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_80402_17	chrX	-	597	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	-242	7524	1	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275282	156249393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_80404_19	chrX	-	419	3	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	-64	7524	-42	-534	5prime_fragment	FALSE	canonical	3	430	junction_1	30.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTTTTTTTTTTTA	NA	False	NA	NA	False	AAGAAA	-9	NA	156275104	156249393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_156249488_156252983_156253105_156274900
Isoform_80405_4	chrX	-	4764	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	30	3	-6	-3	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCTTCTGTATCATA	NA	False	NA	-8	True	AATAAA	-32	NA	156381681	156330822	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
Isoform_80406_9	chrX	-	4598	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381661	156330819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
Isoform_80408_7	chrX	-	3469	6	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	14	-170	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	99.5630453531831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTTGCTTGTGTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	156381661	156349112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156381491
Isoform_80409_3	chrX	-	778	5	FSM	ENSMUSG00000046873.19	ENSMUST00000139786.8	2379	5	-14	1615	14	114	multi-exon	FALSE	canonical	3	154	junction_3	45.1386752131695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTATCTGTTATTTG	NA	False	NA	NA	False	AATAAA	-18	NA	156381661	156355829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
Isoform_8041_8	chr11	-	2917	12	FSM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	-22	4091	-22	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.08100420768356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119347	119037961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047637_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_80412_506	chrX	-	2789	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	51	8	-6	-8	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTACAGTTCTTGAGT	NA	False	NA	-9	True	ATTAAA	-16	NA	158921358	158905212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_80413_230	chrX	-	2820	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	18	10	18	-10	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158921391	158905214	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_80418_45	chrX	-	1430	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	-14	1432	-14	-1432	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTATTTGGTGTAT	NA	False	NA	-10	True	AGTAAA	-18	NA	158921423	158906636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
Isoform_8042_17	chr11	-	2866	12	FSM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	29	4091	-9	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.08100420768356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119119296	119037961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046995_119047468_119047637_119048565_119048714_119049556_119049719_119099596_119100195_119101330_119101567_119119221
Isoform_80421_6	chrX	-	3792	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	64	6	64	-6	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAACAGCTTCTGTGT	NA	False	NA	NA	False	AGTAAA	-11	NA	161612386	161561920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80422_5	chrX	-	1023	9	ISM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	92	5407	92	4591	5prime_fragment	FALSE	canonical	3	54	junction_7	63.0530530585157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTATTTATATATTTTA	NA	False	NA	NA	False	AAAAAG	-37	NA	161612358	161567321	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_80423_18	chrX	-	1178	8	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	88	5403	88	4595	5prime_fragment	FALSE	canonical	3	89	junction_2	55.0558158339594	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATATATTTTAGTAG	NA	False	NA	NA	False	AAAAAG	-41	NA	161612362	161567317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80425_7	chrX	-	2476	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	49	0	49	0	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATGTCTCATCTCCA	NA	False	NA	-7	True	AATAAA	-16	NA	161612401	161571913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_80426_7	chrX	-	2566	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	88	-129	88	128	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	-23	True	ATTAAA	-16	NA	161612362	161571784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
Isoform_80427_8	chrX	-	2592	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	88	9991	88	7	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCATCTCCAAAATACAA	NA	False	NA	1	True	AATAAA	-24	NA	161612362	161571905	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80428_4	chrX	-	2642	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	32	9997	32	1	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATGTCTCATCTCCAAA	NA	False	NA	-5	True	AATAAA	-18	NA	161612418	161571911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80429_8	chrX	-	2709	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	92	9870	92	128	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGGTTTTGTC	NA	False	NA	-23	True	ATTAAA	-16	NA	161612358	161571784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80430_4	chrX	-	2745	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	64	9862	64	136	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTTGTCTGTAATCC	NA	False	NA	-15	True	ATTAAA	-24	NA	161612386	161571776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
Isoform_80431_81	chrX	-	2280	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	15	-208	15	208	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTGTACGTATTTAT	NA	False	NA	-4	True	AATAAA	-20	NA	161671428	161639844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_80433_4	chrX	-	3402	5	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-38	12873	-38	-12021	5prime_fragment	FALSE	canonical	3	120	junction_2	7.90569415042095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	161671481	161652925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
Isoform_80437_13	chrX	-	1705	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-65	2227	-2	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741659	162735608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_8044_336	chr11	-	1501	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	8	0	8	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190907	119179188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
Isoform_80440_4	chrX	-	2598	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-61	1330	2	-1330	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAGAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	162741655	162734711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
Isoform_80441_3	chrX	-	1284	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-111	-713	-2	664	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTATCCTGTCTAAC	NA	False	NA	-17	True	ATTAAA	-26	NA	162741659	162735922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
Isoform_80442_9	chrX	-	1223	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-2	664	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTATCCTGTCTAAC	NA	False	NA	-17	True	ATTAAA	-26	NA	162741659	162735922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
Isoform_80444_3	chrX	-	1543	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-8	978	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741665	162735608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
Isoform_8045_1072	chr11	-	1436	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	71	2	0	-1	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGAGTGCAGATCTTT	NA	False	NA	-12	True	ATTAAA	-18	NA	119190844	119179190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
Isoform_80454_70	chrX	-	1785	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	0	-2	0	2	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859117	162853698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
Isoform_80455_27	chrX	-	2071	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-357	-2	-14	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859503	162853698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
Isoform_80458_156	chrX	-	1702	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	12	-2	12	2	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859134	162853698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
Isoform_8046_5	chr11	-	4314	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	28	15	2	1	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGAGTCTTAATGTCT	6164	False	NA	-22	True	NA	NA	NA	119246334	119234322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
Isoform_80460_85	chrX	-	1999	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	-14	-1182	-14	2	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859503	162853698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
Isoform_80463_11	chrX	-	4040	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	7	-2032	0	-8	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAATCTTTTGTCTCT	NA	False	NA	NA	False	AATAAA	-10	NA	163763324	163719172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
Isoform_80465_20	chrX	-	3548	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-4	909	-4	-909	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTTTGTGTATTTTT	NA	False	NA	NA	False	ATTAAA	-8	NA	165223704	165173937	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
Isoform_8047_8	chr11	-	4165	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	27	165	1	-149	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGCCAGCTGTTGCCC	6163	False	NA	NA	False	NA	NA	NA	119246335	119234472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
Isoform_80472_215	chrX	-	1222	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	219	6	-2	-6	multi-exon	FALSE	canonical	3	555	junction_2	7.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTACGTTGCAATGCT	NA	False	NA	-14	True	ATTAAA	-18	NA	165262644	165240254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165241340_165245310_165245339_165262535
Isoform_80474_33	chrX	-	934	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	175	338	-46	159	multi-exon	FALSE	canonical	3	555	junction_2	7.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGCCTCATTAGTCG	NA	False	NA	-1	True	AATAAA	-15	NA	165262688	165240586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165241340_165245310_165245339_165262535
Isoform_80475_4	chrX	-	1049	3	NNC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-40	159	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	280.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGCCTCATTAGTCG	NA	False	NA	-1	True	AATAAA	-15	NA	165262682	165240586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_165241340_165245310_165245339_165262414
Isoform_80476_16	chrX	-	3999	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	47	4	47	-4	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCTTATTCTCCAAT	NA	False	NA	-6	True	AATAAA	-16	NA	165293427	165282811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
Isoform_8048_11	chr11	-	5212	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	5	0	-5	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTGGTCTCATTGGA	NA	False	NA	NA	False	AGTAAA	-10	NA	119438579	119429549	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
Isoform_80480_3	chrX	-	2691	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	10	3	10	-3	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCACTGTTGAAACACTT	NA	False	NA	NA	False	AATAAA	-12	NA	165368706	165306005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
Isoform_80483_743	chrX	-	614	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	154	0	-12	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992157	165990088	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_165990532_165990932_165991048_165992101
Isoform_80487_47	chrX	-	3679	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	20	0	-19	0	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGTCATCCTTTTG	NA	False	NA	-3	True	AATAAA	-24	NA	166165725	166129317	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
Isoform_80494_5	chrX	-	623	3	FSM	ENSMUSG00000025742.6	ENSMUST00000145456.2	599	3	-27	3	12	-3	multi-exon	FALSE	canonical	1	3	junction_1	111.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAATTTATGTCCTAA	NA	False	NA	NA	False	AATAAA	-22	NA	166165733	166155407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_166155579_166156998_166157183_166165465
Isoform_80495_3	chrX	-	2439	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	1346	-4	-33	4	3prime_fragment	TRUE	canonical	3	23	junction_11	7.54928708800971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGAGTTTTGCTCTGG	NA	False	NA	NA	False	AATAAA	-27	NA	167455548	167437108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
Isoform_80496_6	chrX	-	2204	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	26	86	26	-81	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGCTATGTAATGTTA	NA	False	NA	NA	False	AATAAA	-34	NA	167456868	167437198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
Isoform_80497_5	chrX	-	2290	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	24	2	24	-2	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGAGGAGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	167456870	167437114	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
Isoform_805_6	chr10	-	2541	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-6	-1648	-6	1	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATAGTTGATGGTTGCAT	8575	False	NA	-30	True	AATAAA	-16	NA	40133678	40123697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
Isoform_8050_59	chr11	-	3605	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-18	-9	-18	9	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGTCTTTCTCTACT	NA	False	NA	0	True	AGTAAA	-36	NA	119977671	119955246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
Isoform_80500_56	chrX	-	2530	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-59	2	19	-2	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103349	168094527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
Isoform_80501_7	chrX	-	2655	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-184	2	-106	-2	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTGATTTTT	NA	False	NA	-2	True	AATAAA	-23	NA	168103474	168094527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
Isoform_80503_148	chrX	-	2372	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-59	7	33	-7	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAACTTCTTAGAGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	168103335	168094532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
Isoform_80506_4	chrX	-	2444	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-66	-58	26	58	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCAGTGGTCTCATC	NA	False	NA	58	True	GATAAA	-16	NA	168103342	168094467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
Isoform_80507_29	chrX	-	2323	7	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	191.804950115707	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	168103342	168094528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103170
Isoform_80512_3	chrX	-	1156	3	Intergenic	novelGene_2200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTCTAGAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	138300986	138296086	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_138296298_138297305_138297544_138300279
Isoform_80513_18	chrX	-	1068	3	Intergenic	novelGene_2198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	138300897	138296085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_138296298_138297305_138297544_138300279
Isoform_80514_4	chrX	-	859	4	Intergenic	novelGene_2199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	27.1456974286698	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	138301080	138296085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_138296298_138297305_138297544_138300279_138300652_138301043
Isoform_80515_8	chrX	-	1421	12	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	62	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.4110648974504	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGCTGAACTGGGTGT	NA	False	NA	1	True	AATAAA	-18	NA	72703661	72699596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
Isoform_80516_3	chrX	-	1363	11	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	26.4990565869806	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703676	72699599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
Isoform_80517_10	chrX	-	1706	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	249	-34257	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTAGTATGCAGAATAA	NA	False	NA	NA	False	ATTAAA	-10	NA	12628063	12609624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
Isoform_80518_7	chrX	-	2418	5	Intergenic	novelGene_2160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	3.278719262151	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTCAGATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	55338540	55322445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_55324058_55325906_55326100_55327526_55327950_55337587_55337708_55338470
Isoform_80519_3	chrX	-	1553	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	19	-3646	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	84.3374504923854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTCTTGCGTTTTAC	NA	False	NA	NA	False	AATAAA	-13	NA	36127872	36091035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_36091896_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_8052_33	chr11	-	2751	13	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	21.0797098335501	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989521	119981355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_80520_3	chrX	-	860	5	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	9	-5016	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	116.215317406958	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	36373966	36366118	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_36366428_36368081_36368181_36372567_36372675_36372800_36372908_36373728
Isoform_80521_3	chrX	-	789	5	NNC	ENSMUSG00000067567.13	novel	591	3	NA	NA	-22	4402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.8998327754521	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTGCACTGTAGTATT	NA	False	NA	NA	False	TATAAA	-14	NA	101548709	101537359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_101537673_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_80522_3	chrX	-	2616	2	Genic_Genomic	ENSMUSG00000059334.7	novel	2347	1	NA	NA	-12	1353	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCTCCTTTTGCAG	NA	False	NA	NA	False	AATAAA	-11	NA	52778373	52774661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_-_52774921_52776016
Isoform_80523_3	chrX	-	1423	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	-2	13334	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.2700112437262	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGTGTTAATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	101548754	101435918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
Isoform_80525_3	chrX	-	3705	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-2976	1249	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTCTCACCACTTC	NA	False	NA	-3	True	AATAAA	-15	NA	72445318	72438795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_-_72442387_72445204
Isoform_80526_3	chrX	-	1608	2	Genic_Genomic	ENSMUSG00000082450.2	novel	1041	1	NA	NA	-1852	407	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAATCACAGAGTTGGA	NA	False	NA	NA	False	ATTAAA	-13	NA	85444702	85441402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_-_85442910_85444601
Isoform_80527_3	chrX	-	1600	3	Genic_Genomic	ENSMUSG00000062162.3	novel	993	1	NA	NA	-7900	457	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAATTCATTAGAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	91067839	91058339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_-_91059836_91059955_91059998_91067777
Isoform_80528_7	chrX	+	2412	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	263	361	263	-361	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTTAGAAGTTACTTG	NA	False	NA	12	True	NA	NA	NA	5959769	5966803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_5960459_5965080
Isoform_80529_3	chrX	+	1329	3	FSM	ENSMUSG00000031145.16	ENSMUST00000141876.2	1708	3	-93	472	-93	-472	multi-exon	FALSE	canonical	3	74	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATAGTGTTCAGGAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	7523617	7526895	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7523740_7524859_7524946_7525774
Isoform_8053_126	chr11	-	2736	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	34	0	3	0	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989523	119981356	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_80530_4	chrX	+	2712	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	10	-93	-5	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACATTATTTTTATTGT	NA	False	NA	87	True	AAAAAG	-21	NA	7523617	7534187	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
Isoform_80531_10	chrX	+	2631	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	112	98	-100	-93	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGGCCTGGCTTCT	NA	False	NA	-1	True	NA	NA	NA	7523610	7534099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
Isoform_80532_24	chrX	+	2173	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	9	-93	-4	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTATTTTTATTGTT	NA	False	NA	88	True	AAAAAG	-22	NA	7523617	7534188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_80533_114	chrX	+	2106	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	119	76	-93	-71	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAATGGTTTTGCCTCA	NA	False	NA	21	True	AAGAAA	-17	NA	7523617	7534121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_80535_8	chrX	+	2416	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	120	-235	-92	7	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCTCAGTGGAGAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	7523618	7534432	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_80536_4	chrX	+	2400	9	NNC	ENSMUSG00000031145.16	novel	2301	9	NA	NA	-93	-71	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.9336619853563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAATGGTTTTGCCTCA	NA	False	NA	21	True	AAGAAA	-17	NA	7523617	7534121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_7523740_7524859_7524946_7525774_7525959_7529409_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
Isoform_80537_152	chrX	+	3488	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	82	9	82	-9	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTAAGTCGCATT	NA	False	NA	NA	False	NA	NA	NA	7563451	7576492	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
Isoform_8054_3	chr11	-	2658	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	26.0352589912949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989512	119981355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119987406_119987501_119987703_119987796_119988334_119988408_119989451
Isoform_80543_3	chrX	+	1705	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	64.5585780512551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	3787	False	NA	1	True	AATAAA	-14	NA	7588236	7594424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_80544_3	chrX	+	1544	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	64.5585780512551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTGTGACTGGAGTG	3771	False	NA	16	True	AATAAA	-18	NA	7588220	7594247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_80547_12	chrX	+	1559	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	32	18	0	6	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4038	False	NA	4	True	AATAAA	-17	NA	7588487	7594427	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_80549_6	chrX	+	1494	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	63.2250741399328	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	4039	False	NA	1	True	AATAAA	-14	NA	7588488	7594424	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
Isoform_80550_3	chrX	+	1587	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	-20	1	0	-1	multi-exon	FALSE	canonical	3	26	junction_1	58.911883351324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	4018	False	NA	16	True	AATAAA	-29	NA	7588467	7594439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
Isoform_80551_7	chrX	+	1549	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	2	122	-2	intron_retention	FALSE	canonical	3	906	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGCCTCCTGTGTGA	1292	False	NA	5	True	AATAAA	-18	NA	7594799	7597301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_7595002_7595954
Isoform_80552_14	chrX	+	1314	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	25	0	25	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1195	False	NA	7	True	AATAAA	-20	NA	7594702	7597303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7595002_7595954_7596173_7596506
Isoform_80553_409	chrX	+	1215	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	124	0	124	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1294	False	NA	7	True	AATAAA	-20	NA	7594801	7597303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7595002_7595954_7596173_7596506
Isoform_80554_35	chrX	+	1233	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	101	5	101	-5	multi-exon	FALSE	canonical	3	755	junction_2	75.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGTTTGGCCTCCTGTG	1271	False	NA	2	True	AATAAA	-15	NA	7594778	7597298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7595002_7595954_7596173_7596506
Isoform_80555_64	chrX	+	2946	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	23	True	AATAAA	-34	NA	7628795	7641439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_8056_137	chr11	-	4024	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	189	junction_1	103.515409480908	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5032	False	NA	-11	True	AATAAA	-13	NA	120042136	119995276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_80561_478	chrX	+	3263	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	9	5	3	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7628905	7641436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80562_32	chrX	+	3377	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	-103	3	-5	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628793	7641438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80565_39	chrX	+	3160	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	3	0	3	0	multi-exon	FALSE	canonical	3	29	junction_4	94.1407689314252	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628905	7641438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80567_42	chrX	+	3236	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	1	2	1	0	multi-exon	FALSE	canonical	3	33	junction_2	88.3978101510788	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628915	7641438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80571_59	chrX	+	2911	10	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	87.2919042249043	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	23	True	AATAAA	-34	NA	7630198	7641439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80573_11	chrX	+	2914	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	27	2	27	0	multi-exon	FALSE	canonical	3	13	junction_1	93.7669820010234	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7630224	7641438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
Isoform_80580_12	chrX	+	2916	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	236	4	-5	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3266	False	NA	7	True	NA	NA	NA	7656239	7686802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_80581_4	chrX	+	3701	24	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	-1	0	intron_retention	FALSE	canonical	2	42	junction_23	10.5842555254659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3258	False	NA	7	True	NA	NA	NA	7656231	7686802	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
Isoform_80582_3	chrX	+	2736	22	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	19.6223991589417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTGGTCTCATTCTT	3264	False	NA	8	True	NA	NA	NA	7656237	7686803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
Isoform_80585_32	chrX	+	2115	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	160.029472594161	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_80587_40	chrX	+	2543	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	2	-2	-2	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACTCTATTCTGTGTG	NA	False	NA	8	True	AATAAA	-20	NA	7708318	7741527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80588_76	chrX	+	2112	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	433	-2	-3	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_8059_22	chr11	-	3979	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	156.31776897704	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5031	False	NA	-11	True	AATAAA	-13	NA	120042137	119995276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_80591_53	chrX	+	2244	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	224	3	-2	-3	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_80593_14	chrX	+	2677	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	224	-430	-2	0	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708318	7741529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_80594_16	chrX	+	2544	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-76	3	-51	-3	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708018	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_80599_10	chrX	+	2967	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-68	-428	-43	-2	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACTCTATTCTGTGTG	NA	False	NA	8	True	AATAAA	-20	NA	7708026	7741527	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
Isoform_806_50	chr10	-	716	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-6	177	-6	-3	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGTCTTGTATGCA	8575	False	NA	-19	True	AAAACA	-18	NA	40133678	40125522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
Isoform_80600_120	chrX	+	2508	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-18	1769	-18	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708051	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80601_83	chrX	+	2674	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	249	1336	-2	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708318	7741529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80602_201	chrX	+	2241	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	249	1769	-2	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708318	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80603_43	chrX	+	2959	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-469	1769	-2	-3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7707600	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80604_45	chrX	+	2947	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-24	1336	-24	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708045	7741529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80606_18	chrX	+	3392	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-469	1336	-2	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7707600	7741529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80620_13	chrX	+	2329	8	NIC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	9	-3	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7708329	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80622_11	chrX	+	3058	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAACAAATCAAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	7707600	7741096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
Isoform_80625_105	chrX	+	2040	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	4	1	4	-1	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATTGCCATTTATAGA	NA	False	NA	4	True	AATAAA	-14	NA	7744544	7749670	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
Isoform_80627_4	chrX	+	605	2	ISM	ENSMUSG00000031156.19	ENSMUST00000208640.2	486	4	0	5972	0	1	5prime_fragment	FALSE	canonical	3	84	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	7750571	7752491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_7750673_7751987
Isoform_80628_202	chrX	+	2325	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	305	464	0	1	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTAGCTTTCTGAC	NA	False	NA	7	True	AATAAA	-19	NA	7750571	7760267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
Isoform_80629_5	chrX	+	2788	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	274	32	-8	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGGGTTGGAAAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	7750540	7760699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
Isoform_80630_5	chrX	+	2614	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	15	465	4	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750281	7760266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
Isoform_80631_26	chrX	+	939	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	-42	1484	-42	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1147	False	NA	31	True	TTTAAA	-18	NA	7765553	7773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_80632_266	chrX	+	897	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	1484	0	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_80633_13	chrX	+	1666	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	715	0	666	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAGCAAACCAAAA	1189	False	NA	NA	False	NA	NA	NA	7765595	7773875	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
Isoform_80634_5	chrX	+	977	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	1	-103	intron_retention	FALSE	canonical	3	843	junction_3	49.2290564605904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1190	False	NA	31	True	TTTAAA	-18	NA	7765596	7773106	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772631_7772726
Isoform_80635_21	chrX	+	985	3	FSM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	33	1175	33	-1175	multi-exon	FALSE	canonical	3	43	junction_1	26.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTCTGAGCGCCCT	NA	False	NA	5	True	AATAAA	-15	NA	7786093	7789474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7786284_7788286_7788754_7789146
Isoform_80637_3	chrX	+	1458	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-14	5	-14	-2	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTCCTGGGCCACTGG	7713	False	NA	24	True	TATAAA	-14	NA	7915472	7939193	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
Isoform_80638_12	chrX	+	697	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-3	1765	-3	-1050	5prime_fragment	FALSE	canonical	3	56	junction_1	9.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTTTTCTGAGTC	NA	False	NA	17	True	NA	NA	NA	7917826	7937430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_7917897_7926454_7926526_7936874
Isoform_80639_16	chrX	+	1177	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	1	-1	1	1	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCCACTGGATT	NA	False	NA	27	True	TATAAA	-17	NA	7917830	7939196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
Isoform_80640_22	chrX	+	1110	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGGCCACTGGATT	NA	False	NA	27	True	TATAAA	-17	NA	7917826	7939196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7917897_7936874_7937304_7938585
Isoform_80641_3	chrX	+	1297	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-10	178	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCCCTTGCCATGA	NA	False	NA	NA	False	ATTAAA	-25	NA	7917819	7939376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7917897_7936874_7937304_7938585
Isoform_80642_3	chrX	+	5015	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	61	0	61	0	multi-exon	FALSE	canonical	3	33	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCATTTTATTTCTTGT	NA	False	NA	9	True	AATAAA	-19	NA	9139055	9179489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_9139474_9148235_9148499_9175155
Isoform_80643_6	chrX	+	1710	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	32	3334	32	-3334	multi-exon	FALSE	canonical	3	33	junction_2	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTCGCATTTGACTC	NA	False	NA	NA	False	ATTAAA	-19	NA	9139026	9176155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_9139474_9148235_9148499_9175155
Isoform_80644_58	chrX	+	1746	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-22	9	-22	-9	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTATGTTGTGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	10351374	10462835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
Isoform_80645_4	chrX	+	1732	2	NIC	ENSMUSG00000008035.13	novel	447	2	NA	NA	27	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	10581284	10585932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_10581307_10584222
Isoform_80646_3	chrX	+	1754	2	NIC	ENSMUSG00000008035.13	novel	2022	2	NA	NA	-2	12	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTTGCTCTTTA	1555	False	NA	NA	False	AATAAA	-27	NA	10583704	10585941	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_10583740_10584222
Isoform_80647_27	chrX	+	1829	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	197	-4	119	4	multi-exon	FALSE	canonical	3	75	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1676	False	NA	NA	False	AATAAA	-19	NA	10583825	10585933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_10583944_10584222
Isoform_80648_8	chrX	+	1908	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	118	-4	40	4	multi-exon	FALSE	canonical	3	75	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1597	False	NA	NA	False	AATAAA	-19	NA	10583746	10585933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_10583944_10584222
Isoform_80650_85	chrX	+	1826	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	197	-4	119	4	multi-exon	FALSE	canonical	3	265	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1676	False	NA	NA	False	AATAAA	-19	NA	10583825	10585933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_10583944_10584225
Isoform_80651_74	chrX	+	1946	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	76	-3	-2	3	multi-exon	FALSE	canonical	3	265	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	1555	False	NA	NA	False	AATAAA	-18	NA	10583704	10585932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_10583944_10584225
Isoform_80653_324	chrX	+	2016	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	308	0	-308	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGTCACTGCAATT	NA	False	NA	29	True	AATAAA	-13	NA	12454039	12482980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_80655_139	chrX	+	2038	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-22	308	-22	-308	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGTCACTGCAATT	NA	False	NA	29	True	AATAAA	-13	NA	12454017	12482980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_80658_33	chrX	+	2319	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	6	-1	6	1	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGTTACAGTTTTATT	NA	False	NA	85	True	AATAAA	-20	NA	12454045	12483289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_80664_89	chrX	+	2025	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-11	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	355.114924179483	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGTCACTGCAATT	NA	False	NA	29	True	AATAAA	-13	NA	12454028	12482980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471358_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
Isoform_80668_4	chrX	+	1958	8	NIC	ENSMUSG00000031010.18	novel	2772	17	NA	NA	-1	-14297	intron_retention	FALSE	canonical	3	602	junction_5	54.3334376694462	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAACTGTAAAAAACT	806	False	NA	NA	False	ATTAAA	-36	NA	12937735	12974103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902
Isoform_80669_3	chrX	+	2724	9	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	87384	2397	-1959	1033	3prime_fragment	FALSE	canonical	3	1026	junction_5	73.2707948298638	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTTTGTCCTGTGGT	NA	False	NA	NA	False	AATAGA	-14	NA	13025136	13037170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
Isoform_80671_16	chrX	+	4638	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	2	0	-2	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	16	True	AATAAA	-16	NA	13147260	13160289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_80676_31	chrX	+	4571	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	69	0	-69	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	12	True	AATAAA	-14	NA	13147260	13160222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_80677_7	chrX	+	4676	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	13	3	13	-3	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13147221	13160288	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
Isoform_80684_111	chrX	+	1957	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	2076	134	-2076	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTGTGTAGCATCCAA	NA	False	NA	8	True	AATAAA	-18	NA	16486070	16551981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_80685_17	chrX	+	3219	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1128	2076	-1128	-2076	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTGTGTAGCATCCAA	NA	False	NA	8	True	AATAAA	-18	NA	16484808	16551981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_80688_19	chrX	+	3132	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1129	2164	-1129	-2164	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTCTGGATTCTGTTT	NA	False	NA	9	True	AATAAA	-43	NA	16484807	16551893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_80689_4	chrX	+	3584	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	449	134	-449	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACGTAATAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	16486070	16553608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
Isoform_80694_7	chrX	+	5474	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	23	421	23	-421	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028836	18145754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_80695_3	chrX	+	5454	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	2	-421	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028877	18145754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
Isoform_80696_13	chrX	+	2223	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-19	2	-19	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTATCTAGTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	19925779	19963758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_19927448_19963203
Isoform_80697_6	chrX	+	2143	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-51	114	-51	-114	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGCCTCACCCAGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	19925747	19963646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_19927448_19963203
Isoform_80699_6	chrX	+	4333	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	85	-1	7	1	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATGTCTATACTTT	NA	False	NA	4	True	AATAAA	-19	NA	20230804	20267093	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
Isoform_8070_333	chr11	-	3963	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	106	485	39	7	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGAGTTGGTTTACCTG	5102	False	NA	-5	True	AATAAA	-19	NA	120042066	119995270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_80700_24	chrX	+	3590	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	87	740	-7	-740	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAATGGTTCAATGC	NA	False	NA	-2	True	TATAAA	-40	NA	20230806	20266352	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
Isoform_80701_7	chrX	+	3761	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	90	566	-4	-566	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGCGTGTGTATGTA	NA	False	NA	NA	False	AATAAA	-41	NA	20230809	20266526	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
Isoform_80704_16	chrX	+	4835	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	30	1	1	-1	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCAGTGTGATGAT	NA	False	NA	8	True	ATTAAA	-16	NA	20291956	20386177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_80705_27	chrX	+	4764	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	100	2	0	-2	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20292026	20386176	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_80706_5	chrX	+	5046	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	-187	7	-187	-7	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAACCTCTGTCAGTGT	NA	False	NA	2	True	ATTAAA	-10	NA	20291739	20386171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
Isoform_8071_49	chr11	-	4073	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	-2	483	-2	9	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGGTTTACCTGCA	4994	False	NA	-3	True	AATAAA	-21	NA	120042174	119995268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_80710_63	chrX	+	3404	24	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-16	1	combination_of_known_junctions	TRUE	canonical	3	108	junction_4	89.4718170663217	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	539	False	NA	29	True	AATAAA	-17	NA	20484005	20517128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_80714_47	chrX	+	3417	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	145	2	-16	-2	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTCTCATGTCCTAGT	539	False	NA	39	True	AATAAA	-27	NA	20484005	20517138	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_80719_132	chrX	+	3173	23	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	67.1727297333874	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	539	False	NA	29	True	AATAAA	-17	NA	20484005	20517128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_8072_11	chr11	-	4535	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	35	-16	1	16	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTTTCCTTTACCTA	5031	False	NA	NA	False	ATTAAA	-21	NA	120042137	119994769	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
Isoform_80722_119	chrX	+	3176	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	-16	12	-16	1	multi-exon	FALSE	canonical	3	151	junction_9	72.7799809002085	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	539	False	NA	29	True	AATAAA	-17	NA	20484005	20517128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_80724_11	chrX	+	3100	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	104.114689072799	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	541	False	NA	29	True	AATAAA	-17	NA	20484007	20517128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
Isoform_80726_1219	chrX	+	3474	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	475	0	-475	multi-exon	FALSE	canonical	3	1167	junction_1	494.469940036804	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524659	20548943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_80727_38	chrX	+	3564	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	5	475	5	-475	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524569	20548943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_80731_245	chrX	+	3590	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	6	475	6	-475	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529142	20548943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_80732_1267	chrX	+	3553	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	43	475	43	-475	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529179	20548943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
Isoform_8074_13	chr11	-	3897	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	135.716334571001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	5041	False	NA	-14	True	AATAAA	-10	NA	120042127	119995279	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
Isoform_8075_25	chr11	-	3839	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	39	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	135.716334571001	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5102	False	NA	-11	True	AATAAA	-13	NA	120042066	119995276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
Isoform_8076_47	chr11	-	3913	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	39	3	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTCGAGTTGGTTTA	5102	False	NA	-9	True	AATAAA	-15	NA	120042066	119995274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_80768_1057	chrX	+	3107	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	11	2	11	-2	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	1057	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2335	False	NA	16	True	ATTAAA	-18	NA	20554667	20566117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
Isoform_8077_20	chr11	-	3983	15	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCGAGTCGAGTTGGTT	5030	False	NA	-11	True	AATAAA	-13	NA	120042138	119995276	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
Isoform_80789_5	chrX	+	3514	22	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.5175554282958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570166	20586776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
Isoform_8079_14	chr11	-	3875	14	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	143.204451023351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5019	False	NA	-12	True	AATAAA	-12	NA	120042149	119995277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
Isoform_80793_86	chrX	+	3439	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	28	0	0	0	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570172	20586778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
Isoform_80794_3	chrX	+	4580	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	205	junction_12	31.0921072911192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570166	20586778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
Isoform_80795_30	chrX	+	2352	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-3	0	combination_of_known_junctions	TRUE	non_canonical	1	66	junction_12	96.2243674382372	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	1120	False	NA	23	True	NA	NA	NA	20664049	20726758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
Isoform_80797_12	chrX	+	1536	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-3	-13	0	-2	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTTTGTCCTTCATTG	6305	False	NA	NA	False	AATAAA	-25	NA	20714813	20719141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
Isoform_80798_4	chrX	+	1626	10	FSM	ENSMUSG00000001127.13	ENSMUST00000152955.8	2581	10	2	953	0	-3	multi-exon	FALSE	canonical	3	168	junction_6	87.3856218927361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCCCGTTGTGTAGTTA	6296	False	NA	NA	False	NA	NA	NA	20714804	20720796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151
Isoform_80799_4	chrX	+	2493	15	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	24	0	1	0	intron_retention	FALSE	non_canonical	1	66	junction_12	90.2516040899901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6297	False	NA	23	True	NA	NA	NA	20714805	20726758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
Isoform_808_9	chr10	-	2540	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-12	-2	-7	2	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTGATGGTTGCATC	8574	False	NA	-29	True	AATAAA	-17	NA	40133679	40123696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_80800_146	chrX	+	2322	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	35	1	0	-1	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCTTGTTTATTTT	6308	False	NA	22	True	NA	NA	NA	20714816	20726757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
Isoform_80803_6	chrX	+	2300	16	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	non_canonical	1	12	junction_13	103.468642592816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTTTGCTTGTTTATTT	6305	False	NA	21	True	NA	NA	NA	20714813	20726756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
Isoform_80804_13	chrX	+	967	7	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	124.993333155546	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTATCTTTGTCCTTCAT	6305	False	NA	NA	False	AATAAA	-23	NA	20714813	20719139	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
Isoform_80805_23	chrX	+	859	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	-28	2	27	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736431	20740972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_80806_38	chrX	+	810	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	21	2	21	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736480	20740972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_80807_145	chrX	+	764	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	119	0	64	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736523	20740972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_80808_56	chrX	+	875	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	8	0	8	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736412	20740972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
Isoform_80810_3	chrX	+	6713	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-8	1	combination_of_known_junctions	TRUE	canonical	1	53	junction_53	22.4821593760484	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCGAAGTGAAGGAAATAA	NA	False	NA	9	True	AATAAA	-21	NA	35152476	35340216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
Isoform_80811_11	chrX	+	3657	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	53	2	53	-2	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGCTTTTTTTTTTGG	NA	False	NA	NA	False	AATAAA	-22	NA	35375815	35434910	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
Isoform_80812_9	chrX	+	3740	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	-31	3	-31	-3	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGCTTTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	35375731	35434909	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
Isoform_80813_8	chrX	+	1333	4	FSM	ENSMUSG00000016239.12	ENSMUST00000135758.2	2278	4	56	889	56	-32	multi-exon	FALSE	canonical	3	28	junction_3	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGACAGAAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	35592061	35605375	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275
Isoform_80814_456	chrX	+	1853	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	3	1	3	-1	multi-exon	FALSE	canonical	3	454	junction_1	42	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGAGGCTTTCATTT	1671	False	NA	NA	False	AATAAA	-14	NA	35861861	35869731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_35862268_35865773_35865930_35868440
Isoform_80820_5	chrX	+	1112	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	20	-21	20	21	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAGAAGTGCAGCAATC	NA	False	NA	NA	False	AATAAA	-17	NA	36007331	36040876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
Isoform_80821_3	chrX	+	1472	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	51	-412	-1	412	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	36007362	36041267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
Isoform_80824_6073	chrX	+	1234	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	6	0	-6	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	6073	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGTTTTGTTCGTTGT	NA	False	NA	23	True	AATAAA	-25	NA	36059303	36062454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
Isoform_80839_7	chrX	-	1256	7	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	19	8969	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	75.5389891968968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGAGCTGTTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	36127872	36078420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
Isoform_80840_366	chrX	+	679	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	65	988	2	-16	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAATAGCTGTTGTG	NA	False	NA	7	True	NA	NA	NA	36138012	36146887	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_80841_56	chrX	+	1664	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	65	3	2	-3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGTTCACACTTTTA	NA	False	NA	4	True	AATAAA	-13	NA	36138012	36147872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_80842_118	chrX	+	732	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	964	0	3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCTTGGCAAG	NA	False	NA	31	True	ATTAAA	-23	NA	36137983	36146911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_80843_12	chrX	+	1693	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	3	0	-3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGTTCACACTTTTA	NA	False	NA	4	True	AATAAA	-13	NA	36137983	36147872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
Isoform_80852_38	chrX	+	4191	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	31	8	31	-8	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTCATATTTTTAATG	NA	False	NA	16	True	AATAAA	-16	NA	36390478	36414391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
Isoform_80856_27	chrX	+	785	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	13	-3	-9	3	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36508641	36513342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
Isoform_80857_4	chrX	+	807	4	FSM	ENSMUSG00000095698.3	ENSMUST00000115179.4	685	4	-32	-90	-32	90	multi-exon	FALSE	canonical	3	16	junction_2	8.9938250421547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	6857	False	NA	NA	False	AATAAA	-15	NA	36675048	36679366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36675169_36675331_36675744_36677299_36677346_36679137
Isoform_80858_7	chrX	+	799	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	2	-2	2	2	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36712106	36723468	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
Isoform_80859_4	chrX	+	715	4	NNC	ENSMUSG00000096788.9	novel	799	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	23.6690139681023	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36712106	36723467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36723319
Isoform_80862_148	chrX	+	862	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	29	2	29	-2	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTAGTGATTCGAGT	8534	False	NA	15	True	ATTAAA	-12	NA	36891664	36897306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
Isoform_80863_4	chrX	+	1103	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	-93	0	-93	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915693	36918734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_80864_99	chrX	+	870	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	137	3	137	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915923	36918731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_80865_17	chrX	+	909	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	98	3	98	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915884	36918731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_80866_12	chrX	+	1014	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	-7	3	-7	-3	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGGCTCCATTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	36915779	36918731	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
Isoform_80868_3	chrX	+	1616	4	NIC	ENSMUSG00000071767.5	novel	409	3	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_2	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTCAGGTGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36926736	36930150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_36926871_36927028_36928246_36928868_36928915_36929931
Isoform_80869_53	chrX	+	917	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-37	-4	-37	4	multi-exon	FALSE	canonical	3	73	junction_1	2	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTATGTGCTTTC	NA	False	NA	6	True	AATAAA	-19	NA	37210058	37218848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37210700_37211950_37211997_37218618
Isoform_80871_61	chrX	+	880	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	-97	0	97	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACTCAATGTCCTA	NA	False	NA	9	True	ATTAAA	-22	NA	37689531	37702400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80872_77	chrX	+	782	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	1	0	-1	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689531	37702302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80873_13	chrX	+	908	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-30	-95	-30	95	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGATGACTCAATGTCC	NA	False	NA	7	True	ATTAAA	-20	NA	37689501	37702398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80876_7	chrX	+	870	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-88	1	-11	-1	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689443	37702302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80878_6	chrX	+	1076	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-196	-97	-119	97	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACTCAATGTCCTA	NA	False	NA	9	True	ATTAAA	-22	NA	37689335	37702400	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80879_6	chrX	+	981	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-200	2	-123	-2	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTTAGTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	37689331	37702301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80880_9	chrX	+	640	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTAGTTTCAGAAA	NA	False	NA	16	True	AATAAA	-18	NA	37689520	37702302	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80881_5	chrX	+	724	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	94	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGATGACTCAATGTC	NA	False	NA	6	True	ATTAAA	-19	NA	37689531	37702397	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80882_3	chrX	+	1223	6	NIC	ENSMUSG00000000355.14	novel	764	4	NA	NA	176	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	233.438985604376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGTTAGTTTCAGA	NA	False	NA	14	True	AATAAA	-16	NA	37689707	37702300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
Isoform_80883_3	chrX	+	4038	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	153	2351	71	-2351	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGTACTGGAT	NA	False	NA	NA	False	NA	NA	NA	41156865	41196182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
Isoform_80884_6	chrX	+	372	3	ISM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-19	71061	-19	0	5prime_fragment	FALSE	canonical	3	102	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATCATATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	41239558	41295001	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_41239712_41290731_41290872_41294922
Isoform_80885_4	chrX	+	5155	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	0	-6	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	25.9866860380401	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTCATTGTGATCTG	NA	False	NA	11	True	AATAAA	-12	NA	47001331	47054739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
Isoform_80887_6	chrX	+	3254	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-67	311	-67	0	multi-exon	FALSE	canonical	3	24	junction_11	7.3109506905737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTGTGGGCAGACTC	NA	False	NA	NA	False	ATTAAA	-27	NA	47197534	47225547	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
Isoform_80889_3	chrX	+	3323	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-135	310	-135	1	multi-exon	TRUE	canonical	3	24	junction_11	7.3109506905737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGTGGGCAGACTCT	NA	False	NA	NA	False	ATTAAA	-28	NA	47197466	47225548	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
Isoform_80890_14	chrX	+	2663	8	FSM	ENSMUSG00000031101.7	ENSMUST00000033427.7	2677	8	11	3	11	-3	multi-exon	FALSE	canonical	1	3	junction_3	1.30930734141595	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTACCGTCGCCTGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	47235323	47250439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248942
Isoform_80892_3	chrX	+	734	6	ISM	ENSMUSG00000063785.13	ENSMUST00000125966.8	2138	7	-50	4236	-15	-4236	5prime_fragment	FALSE	canonical	3	345	junction_4	29.36256119619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAGAAAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47345723	47352610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353
Isoform_809_9	chr10	-	1052	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	1485	-6	162	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTACCTGTTGGGCCG	8575	False	NA	2	True	NA	NA	NA	40133678	40125183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_80900_91	chrX	+	2474	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	30	3	-5	-3	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345768	47371327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
Isoform_80901_48	chrX	+	2509	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	-5	3	-5	-3	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345733	47371327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
Isoform_80902_11	chrX	+	1424	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345735	47371327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
Isoform_80904_5	chrX	+	2344	12	NIC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	-46	-367	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.12991631401003	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTCCTTTCTTT	NA	False	NA	27	True	NA	NA	NA	47432600	47495219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47432767_47450409_47450540_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
Isoform_80905_4	chrX	+	1189	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	-31	0	-31	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	False	NA	6	True	AATAAA	-14	NA	47608130	47619109	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47608736_47618525
Isoform_80906_9	chrX	+	991	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	171	-4	171	4	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCTTTGTGTCTTGCTT	NA	False	NA	10	True	AATAAA	-18	NA	47608332	47619113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47608736_47618525
Isoform_80907_3	chrX	+	1490	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	29	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATCATTTTGACTTTGT	NA	False	NA	9	True	ATTAAA	-12	NA	47712318	47751166	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_80908_8	chrX	+	1336	10	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCATTTTGACTTTGTCT	NA	False	NA	11	True	ATTAAA	-14	NA	47712639	47751168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
Isoform_80909_197	chrX	+	507	5	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	86	1656	86	1	5prime_fragment	FALSE	canonical	3	254	junction_1	56.9753236059261	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGTAGCATATTAAAA	NA	False	NA	-4	True	AAAAAG	-5	NA	47783966	47797944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766
Isoform_80910_24	chrX	+	572	5	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	21	1656	21	1	5prime_fragment	FALSE	canonical	3	254	junction_1	56.9753236059261	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGTAGCATATTAAAA	NA	False	NA	-4	True	AAAAAG	-5	NA	47783901	47797944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766
Isoform_80911_54	chrX	+	1664	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	76	7	76	-7	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTCGGGGCATTTGGT	NA	False	NA	NA	False	NA	NA	NA	47783956	47799593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
Isoform_80912_3	chrX	+	1769	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	-24	2	-24	-2	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGGCATTTGGTCCACT	NA	False	NA	NA	False	NA	NA	NA	47783856	47799598	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
Isoform_80913_3	chrX	+	471	4	NIC	ENSMUSG00000031107.7	novel	1747	6	NA	NA	76	7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	160.300412420624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATATTAAAACTCAGG	NA	False	NA	2	True	AAAAAG	-11	NA	47783956	47797950	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_47783998_47784196_47784313_47795181_47795312_47797766
Isoform_80915_5	chrX	+	3250	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	392	-3	-2	3	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGATGTTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	49930315	49981977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
Isoform_80916_24	chrX	+	1569	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-9	-24	-9	24	multi-exon	FALSE	canonical	3	142	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAAATATGCCTGTG	NA	False	NA	NA	False	CATAAA	-20	NA	51880067	51888369	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_51880203_51886935
Isoform_80918_28	chrX	+	4359	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001133	52045820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
Isoform_80922_929	chrX	+	1321	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	-31	-1	-31	1	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52076982	52110537	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
Isoform_80927_57	chrX	+	1444	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-16	-1	-16	1	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTTTACCTGTAGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	52726776	52740409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
Isoform_80928_10	chrX	+	1567	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-16	-124	-16	124	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTTTCCATGATCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	52726776	52740532	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
Isoform_80929_6	chrX	+	1039	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	-18	1	-18	-1	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	55181913	55198857	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
Isoform_80930_3	chrX	+	756	8	NNC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	10	-208	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.1048273216323	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTTTGAAAGGCTCT	NA	False	NA	NA	False	AATAAA	-30	NA	55181941	55198650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_55181986_55183378_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
Isoform_80931_7	chrX	+	3736	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	-2	4	-2	-4	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCTCTTTCTGATTCT	NA	False	NA	2	True	AATAAA	-12	NA	55391757	55411030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
Isoform_80932_32	chrX	+	2401	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-9	1	-9	-1	multi-exon	FALSE	canonical	3	59	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATCCTGGCTGCCTCCT	NA	False	NA	13	True	AAGAAA	-14	NA	55419936	55423158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55420569_55421389
Isoform_80934_3	chrX	+	2173	3	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	195	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATCCTGGCTGCCTCCT	NA	False	NA	13	True	AAGAAA	-14	NA	55420140	55423158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_55420569_55421389_55421503_55421526
Isoform_80935_6	chrX	+	3894	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	6	-1	intron_retention	FALSE	canonical	3	44	junction_10	16.0656094259874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500222	55553202	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_80936_6	chrX	+	3781	17	FSM	ENSMUSG00000035967.16	ENSMUST00000039374.9	3766	17	-14	-1	6	0	multi-exon	FALSE	canonical	3	20	junction_10	18.8414436814168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTAGGTGTATGTCT	NA	False	NA	16	True	AATAAA	-27	NA	55500222	55553200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_80938_4	chrX	+	4038	17	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	44	junction_9	15.57040461902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACATTTCTAGGTGTA	NA	False	NA	11	True	AATAAA	-22	NA	55500203	55553195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
Isoform_80940_8	chrX	+	2350	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	13	378	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	37.5097903886439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTGAGTACCGAGTTC	NA	False	NA	25	True	CATAAA	-27	NA	55655147	55707119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_80941_8	chrX	+	2438	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	75	2463	33	386	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCGAGTTCTTGTGCTG	NA	False	NA	33	True	CATAAA	-35	NA	55655209	55707127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_80942_6	chrX	+	4501	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	75	400	33	1	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATTCACTGTTATT	NA	False	NA	14	True	ATTAAA	-18	NA	55655209	55709190	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
Isoform_80943_23	chrX	+	2574	8	NIC	ENSMUSG00000023092.17	novel	2770	8	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	57.513796037941	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777121	55838699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
Isoform_80944_190	chrX	+	2348	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	1	7	1	1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777147	55838699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
Isoform_80945_14	chrX	+	2449	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-100	7	-100	1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777046	55838699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
Isoform_80947_26	chrX	+	2159	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCACGCCTCCTGTCTT	NA	False	NA	5	True	AATAAA	-11	NA	55777149	55838699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
Isoform_80948_20	chrX	+	1148	6	FSM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	-19	-1	-19	1	multi-exon	FALSE	canonical	3	35	junction_5	193.065170344109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACTGGCTCACTTATG	NA	False	NA	26	True	NA	NA	NA	56098923	56102567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
Isoform_80951_61	chrX	+	2859	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-51	2	-19	-2	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGGACTTGAGTTAACT	NA	False	NA	14	True	AATAAA	-29	NA	56098923	56112541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
Isoform_80960_4	chrX	+	1001	5	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	316	-1	1	1	3prime_fragment	FALSE	canonical	3	35	junction_4	215.852380111964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACTGGCTCACTTATG	NA	False	NA	26	True	NA	NA	NA	56099258	56102567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
Isoform_80964_19	chrX	+	2715	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	281	2	-2	-2	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGGACTTGAGTTAACT	NA	False	NA	14	True	AATAAA	-29	NA	56099255	56112541	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
Isoform_80969_26	chrX	+	2159	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	0	-3	0	3	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTCCCTGTCTGGCCTC	NA	False	NA	12	True	TATAAA	-5	NA	56454513	56534130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
Isoform_80970_32	chrX	+	2159	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.271641013774	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454513	56534129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
Isoform_80979_8	chrX	+	3671	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	350	-72	-6	72	multi-exon	FALSE	canonical	3	194	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTAGAGAATTTCTGG	9850	False	NA	6	True	AATAAA	-16	NA	57076352	57081991	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_57077598_57078721_57078886_57079729
Isoform_80983_4	chrX	+	1950	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088629.4	1951	3	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_2	99.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	9867	False	NA	NA	False	NA	NA	NA	57076369	57087095	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_57077598_57078721_57078886_57086537
Isoform_80984_68	chrX	+	1563	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	16	-7	16	7	multi-exon	FALSE	canonical	3	101	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTTGTTCTTTGGAG	NA	False	NA	20	True	AATAAA	-25	NA	57956836	57965671	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_57956922_57964193
Isoform_80985_4	chrX	+	1944	4	FSM	ENSMUSG00000045330.9	ENSMUST00000051414.2	1970	4	27	-1	27	1	multi-exon	FALSE	canonical	1	3	junction_2	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTTTTCTGTTTGGA	NA	False	NA	NA	False	AATAAA	-22	NA	61330774	61335685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_61330842_61332956_61333046_61333767_61333841_61333970
Isoform_80986_3	chrX	+	1619	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	-3	33	-3	-33	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAACAGAATAAAATTAAA	NA	False	NA	NA	False	AATGAA	-5	NA	63217150	63222351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
Isoform_80997_8	chrX	+	4255	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	144	10	61	-10	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722290	67761559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_80998_5	chrX	+	4354	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	45	10	4	-10	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722191	67761559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_810_90	chr10	-	713	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	1824	-6	-3	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGTCTTGTATGCA	8575	False	NA	-19	True	AAAACA	-18	NA	40133678	40125522	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_81002_5	chrX	+	4330	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	14	65	14	-65	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGTTTATCTTATCT	NA	False	NA	33	True	ATTAAA	-14	NA	67722160	67761504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_81005_8	chrX	+	4314	17	FSM	ENSMUSG00002075986.1_ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	-266	10	10	-10	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722156	67761559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
Isoform_81007_8	chrX	+	4328	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	16	True	ATTAAA	-22	NA	67722187	67761565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
Isoform_8101_17606	chr11	-	1902	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	50	0	-3	0	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	17606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239318	120236515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
Isoform_81010_7	chrX	+	4295	16	FSM	ENSMUSG00002075986.1_ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	-229	10	0	-10	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATACTAGTCTG	NA	False	NA	10	True	ATTAAA	-16	NA	67722187	67761559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
Isoform_81012_34	chrX	+	914	6	FSM	ENSMUSG00000062170.13	ENSMUST00000071848.7	842	6	-80	8	15	-8	multi-exon	FALSE	canonical	3	35	junction_2	319.056484027515	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67805838_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
Isoform_81014_276	chrX	+	776	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	15	8	15	-8	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
Isoform_81018_183	chrX	+	698	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-27	8	15	-8	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805459	67848165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
Isoform_81019_7	chrX	+	762	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-91	8	-49	-8	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTGGATTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	67805395	67848165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
Isoform_8102_395	chr11	-	1931	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	21	0	21	0	multi-exon	FALSE	canonical	3	5636	junction_4	454.292680988809	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239347	120236515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
Isoform_81020_169	chrX	+	1094	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429482	69433023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_69429758_69431499_69431773_69432477
Isoform_81022_3	chrX	+	2630	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	25	6493	0	-1509	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTGGAACCTTGTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	70258636	70352408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
Isoform_81023_70	chrX	+	3351	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	26	2	1	-2	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCAGGGCTATGACT	NA	False	NA	14	True	AATAAA	-22	NA	70258637	70358899	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_81028_9	chrX	+	4623	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	4	7	4	-7	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGTCTCTGTTGTCTC	NA	False	NA	4	True	ACTAAA	-17	NA	70408369	70462795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
Isoform_81029_154	chrX	+	1543	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	0	28	0	-28	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599523	70604254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_81031_3	chrX	+	1538	5	FSM	ENSMUSG00000015217.12	ENSMUST00000015361.11	1544	5	-22	28	1	-28	multi-exon	FALSE	canonical	3	37	junction_1	352.483687565822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599524	70604254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70599615_70601662_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_81032_72	chrX	+	1653	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	62	28	0	-28	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTCTGTATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	70599595	70604254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_81035_7	chrX	+	1658	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	46	24	46	-24	multi-exon	FALSE	canonical	3	38	junction_1	352.060630431748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTATTACAACGGCC	NA	False	NA	NA	False	AATAAA	-21	NA	70599641	70604258	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
Isoform_81037_16	chrX	+	2425	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	35	1735	3	-1735	multi-exon	FALSE	canonical	3	286	junction_1	56.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCACACTGGTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	70860398	70866577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_81039_12	chrX	+	1915	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	1	2279	1	1443	multi-exon	FALSE	canonical	3	286	junction_1	56.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGCTATTATTGATT	NA	False	NA	NA	False	AATAAA	-14	NA	70860364	70866033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_81040_68	chrX	+	509	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	35	3651	3	71	multi-exon	FALSE	canonical	3	286	junction_1	56.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTTAAAGAGTCA	NA	False	NA	24	True	AATAAA	-36	NA	70860398	70864661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_81042_4	chrX	+	4141	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	39	15	7	-15	multi-exon	FALSE	canonical	3	286	junction_1	56.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGTAATGCTACTGTG	NA	False	NA	1	True	ATTAAA	-5	NA	70860402	70868297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_70860547_70863673_70863784_70864410
Isoform_81043_15	chrX	+	2125	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	51	-8	51	8	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGCTGGCTGTTCTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	71962213	72002128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
Isoform_81044_138	chrX	+	1752	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	39	377	39	-377	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGGTGTGGTCTTTA	NA	False	NA	19	True	CATAAA	-19	NA	71962201	72001743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
Isoform_81046_17	chrX	+	3503	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	21	33	0	-33	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCAGTATTATAACT	NA	False	NA	12	True	AATAAA	-12	NA	72030965	72075116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_81047_5	chrX	+	3506	19	FSM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	0	27	0	-27	multi-exon	FALSE	canonical	3	15	junction_9	16.5279411756629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTATAACTTCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	72030965	72075122	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_81048_3	chrX	+	3444	18	NNC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.4309868468961	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030965	72075124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72031126_72040640_72040719_72040887_72041012_72042141_72042180_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
Isoform_81049_26	chrX	+	2847	5	FSM	ENSMUSG00000067771.10	ENSMUST00000088459.9	2864	5	21	-4	21	4	multi-exon	FALSE	canonical	3	20	junction_1	16.161296358894	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGATGTCTAAGACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	72160673	72172872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72160742_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_81051_5	chrX	-	2973	6	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	23.2860473245246	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72193031	72180837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347_72192484_72192967
Isoform_81052_3	chrX	+	3141	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.003333101884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72160674	72172868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72160742_72161063_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_81053_5	chrX	+	1174	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	4	474	4	305	multi-exon	TRUE	canonical	3	121	junction_8	146.338167868127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72192405	72202004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
Isoform_81054_3	chrX	+	1055	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	24	305	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72192425	72202004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
Isoform_81055_3	chrX	+	978	7	NIC	ENSMUSG00000072479.11	novel	864	8	NA	NA	91	304	combination_of_known_splicesites	FALSE	canonical	3	121	junction_6	163.137382458943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGCATGCTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	72194830	72202003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
Isoform_81056_178	chrX	+	1585	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-11	-10	0	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81057_4	chrX	+	1990	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-26	-400	-11	390	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAATGTCTCCTACT	NA	False	NA	NA	False	AATAAA	-17	NA	72235801	72246926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81059_9	chrX	+	1507	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	505.773079713883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235795	72246536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72245455_72245552_72245645
Isoform_81060_3	chrX	+	2110	10	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	547.549851160762	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235808	72246536	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241732_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81061_61	chrX	+	2398	8	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72235816	72246534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81062_3	chrX	+	1761	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-25	-658	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCAAATATGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	72235787	72245868	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81063_3	chrX	+	2238	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	467.123845998039	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72235816	72246534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241732_72241891_72241992_72243351_72243451_72245455_72245552_72245645
Isoform_81065_13	chrX	+	1192	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_81066_6	chrX	+	1174	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	104.319221622863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	16	True	AATAAA	-16	NA	72257942	72266057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72258088_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_81067_28	chrX	+	1235	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	-35	0	-19	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257919	72266059	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
Isoform_81069_3204	chrX	+	2711	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	10	1	10	-1	multi-exon	FALSE	canonical	3	583	junction_1	9.62635271879577	3204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGTTGTTGCTTCT	NA	False	NA	27	True	AATAAA	-21	NA	72683034	72687119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
Isoform_81070_1107	chrX	+	2736	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-15	1	-15	-1	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGTTGTTGCTTCT	NA	False	NA	27	True	AATAAA	-21	NA	72683009	72687119	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
Isoform_81085_660	chrX	+	2722	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-618	1210	17	1	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716772	72724898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_81086_253	chrX	+	3929	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-618	3	17	-3	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCTCCTGTTTCTGC	NA	False	NA	27	True	AATAAA	-17	NA	72716772	72726105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_81087_34	chrX	+	3971	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-663	6	-28	-6	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATTGGCTCCTGTTTC	NA	False	NA	24	True	AATAAA	-14	NA	72716727	72726102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_81088_78	chrX	+	2776	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-672	1210	-37	1	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716718	72724898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_81092_15	chrX	+	2597	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	17	11	intron_retention	FALSE	canonical	3	40	junction_4	118.785590577837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATGCCTCTCCTCC	NA	False	NA	20	True	AATAAA	-26	NA	72716772	72724908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
Isoform_81098_29	chrX	+	3652	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	-12	8	-12	-8	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACAATCCTGCCTCCTG	NA	False	NA	10	True	AGTAAA	-11	NA	72760190	72782132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
Isoform_81099_36	chrX	+	3543	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	97	8	-46	-8	multi-exon	FALSE	canonical	3	38	junction_7	8.3901765016235	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACAATCCTGCCTCCTG	NA	False	NA	10	True	AGTAAA	-11	NA	72760299	72782132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
Isoform_81104_33	chrX	+	1044	5	ISM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-16	1	-16	-1	intron_retention	FALSE	canonical	3	1181	junction_1	174.03789098929	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACACGGGGCTCCTGTG	5416	False	NA	45	True	AATAAA	-27	NA	72830617	72834429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964
Isoform_81106_314	chrX	+	806	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-5	-1	-5	-1	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_81109_10	chrX	+	1114	6	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	15	-1	intron_retention	FALSE	canonical	3	147	junction_2	607.911835713042	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5447	False	NA	47	True	AATAAA	-29	NA	72830648	72834431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964
Isoform_81110_40	chrX	+	885	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	575.300621897418	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5447	False	NA	47	True	AATAAA	-29	NA	72830648	72834431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_81111_16	chrX	+	880	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	599.846276603894	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5427	False	NA	47	True	AATAAA	-29	NA	72830628	72834431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72830913_72832440_72832560_72832685_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_81114_109	chrX	+	814	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-50	1	-16	-1	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGGGCTCCTGTGTC	5416	False	NA	47	True	AATAAA	-29	NA	72830617	72834431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_81118_10	chrX	+	894	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	599.594863220158	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTCAAGACACGGGGCT	5427	False	NA	39	True	AATAAA	-21	NA	72830628	72834423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72830913_72832443_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
Isoform_81120_10	chrX	+	2462	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	1	10	1	-10	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCATCTACTTTATGC	6477	False	NA	-4	True	AATAAA	-8	NA	73220865	73252096	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
Isoform_81121_453	chrX	+	1343	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	112	140	-11	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	20	True	AATAAA	-15	NA	73298404	73301353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
Isoform_81122_18	chrX	+	1398	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	57	140	-8	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	20	True	AATAAA	-15	NA	73298349	73301353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
Isoform_81123_6	chrX	+	1348	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	-9	-1	5	1	multi-exon	FALSE	canonical	3	12	junction_5	106.854293315711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	73298426	73305155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
Isoform_81125_76	chrX	+	784	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	12	3	12	-3	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTGTTTCTGATT	NA	False	NA	9	True	AATAAA	-19	NA	73314429	73316738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_81126_14	chrX	+	862	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-63	0	-63	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314354	73316741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_81127_29	chrX	+	757	7	FSM	ENSMUSG00000008682.14	ENSMUST00000151702.8	648	7	1	-110	0	0	multi-exon	FALSE	canonical	3	57	junction_1	3469.80780767786	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_81128_163	chrX	+	857	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-2	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_81129_10	chrX	+	1485	5	NIC	ENSMUSG00000008682.14	novel	855	6	NA	NA	0	-7	intron_retention	FALSE	canonical	3	9221	junction_2	201.900191926605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTATGTTTTTGTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	73314463	73316734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
Isoform_81132_8	chrX	+	2007	2	FSM	ENSMUSG00000008682.14	ENSMUST00000146584.2	699	2	-981	-327	-1	-2	multi-exon	FALSE	canonical	3	9221	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTGTTTCTGATTC	NA	False	NA	10	True	AATAAA	-20	NA	73314461	73316739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73315514_73315784
Isoform_81137_6	chrX	+	2679	6	ISM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	1	0	-1	intron_retention	FALSE	canonical	3	226	junction_5	12.5123938556936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTCTGTCTTCTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	73326355	73333753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783
Isoform_81138_3	chrX	+	1746	9	FSM	ENSMUSG00000009995.18	ENSMUST00000114182.11	750	9	-335	-661	-3	-2	multi-exon	FALSE	canonical	3	23	junction_6	86.9927259890159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATACCTCTGTCTTCTGTG	NA	False	NA	5	True	AATAAA	-18	NA	73326352	73333752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332710_73332789_73332904
Isoform_81139_32	chrX	+	1807	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	42	2	-11	1	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326344	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
Isoform_8114_9	chr4	+	748	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-74	454	-74	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTACTGCTGCAT	NA	False	NA	NA	False	CATAAA	-37	NA	103420524	103421272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr4_+_103420500_103421300
Isoform_81140_21	chrX	+	1743	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	-1	0	1	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
Isoform_81141_11	chrX	+	2265	9	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-16	1	intron_retention	FALSE	canonical	3	76	junction_7	67.3163009604657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326339	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332626_73332710_73332789_73332904
Isoform_81142_3	chrX	+	2027	9	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	70	junction_6	75.5379664473435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332321_73332710_73332789_73332904
Isoform_81143_3	chrX	+	2343	9	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	-11	1	intron_retention	FALSE	canonical	3	70	junction_6	76.7788015991393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326344	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332626_73332710_73332789_73332904
Isoform_81144_5	chrX	+	2406	8	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	70	junction_6	63.5295206970744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326367	73333756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
Isoform_81145_34	chrX	+	2480	8	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	76	junction_6	61.4664335143954	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
Isoform_81146_36	chrX	+	2565	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
Isoform_81147_4	chrX	+	2642	6	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	243	junction_3	8.17312669668102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326356	73333755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73332789_73332904
Isoform_81148_4	chrX	+	2910	5	NIC	ENSMUSG00000009995.18	novel	826	8	NA	NA	2	-6	intron_retention	FALSE	canonical	3	226	junction_4	13.8744369255116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATACCTCTGTCTTC	NA	False	NA	1	True	AATAAA	-14	NA	73326357	73333748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783
Isoform_81149_28	chrX	+	2090	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340764	73348296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_81151_29	chrX	+	2318	9	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	-16	-1	4	1	intron_retention	FALSE	canonical	3	647	junction_4	28.1954672775608	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963
Isoform_81153_1793	chrX	+	2108	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	50	31	4	1	multi-exon	FALSE	canonical	3	647	junction_4	26.5934179176579	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_81154_59	chrX	+	2161	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	-3	31	-3	1	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340699	73348296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_81157_33	chrX	+	2660	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	665	junction_4	23.6748812035034	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
Isoform_8116_4	chr11	-	3188	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	5	0	5	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269585	120260387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
Isoform_81160_432	chrX	+	2407	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	258	1	0	1	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTCTTTAGGTTCT	6206	False	NA	14	True	AATAAA	-15	NA	73348861	73355467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_81161_11	chrX	+	2679	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	-20	7	-20	-3	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAAGCCTGGCTCTTTA	5928	False	NA	8	True	AATAAA	-9	NA	73348583	73355461	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_81162_7	chrX	+	1839	6	ISM	ENSMUSG00000015291.11	ENSMUST00000149391.8	2746	9	-16	2068	-5	223	5prime_fragment	FALSE	canonical	3	736	junction_5	48.830318450733	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGAAAAAAAAAAGCCCAT	6201	False	NA	NA	False	AATAAA	-11	NA	73348856	73353396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681
Isoform_81163_82	chrX	+	2666	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTCTTTAGGTTCT	6206	False	NA	14	True	AATAAA	-15	NA	73348861	73355467	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
Isoform_81168_64	chrX	+	1392	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-4	-5	-4	5	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTGCGCTTTATTTTA	195	False	NA	NA	False	AATAAA	-38	NA	73356634	73363760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
Isoform_81169_25	chrX	+	2548	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	33	751	0	429	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTAAATCCTTCCT	NA	False	NA	5	True	AATAAA	-17	NA	73473309	73493141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_8117_92	chr11	-	3672	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	28	421	28	-421	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGAGTTACTCTTTG	NA	False	NA	-2	True	AAGAAA	-22	NA	120328506	120271616	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_81172_18	chrX	+	4529	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	38	-1235	5	1	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGCACTCTGTCCTCCC	NA	False	NA	2	True	AATAAA	-16	NA	73473314	73495127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_81174_5	chrX	+	2543	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	2	1985	2	429	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTAAATCCTTCCT	NA	False	NA	5	True	AATAAA	-17	NA	73473311	73493141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_81175_3	chrX	+	4520	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	15	-5	-3	5	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGTCCTCCCTTGT	NA	False	NA	6	True	AATAAA	-20	NA	73473324	73495131	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
Isoform_8118_28	chr11	-	4051	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	70	0	70	0	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	-8	True	AATAAA	-16	NA	120328464	120271195	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_81193_45	chrX	+	2596	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	206	2	7	-2	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139665	74153381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
Isoform_812_5	chr10	-	1167	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-468	1827	-31	-6	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAGTGGTCTTGTAT	8118	False	NA	-22	True	AAAACA	-15	NA	40134135	40125525	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
Isoform_8120_55	chr11	-	806	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	10	-3	10	3	multi-exon	FALSE	canonical	3	42	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGGCTTTTGTGTTGT	969	False	NA	-3	True	AATAAA	-21	NA	120348884	120347428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120347989_120348638
Isoform_8121_12	chr11	-	774	2	FSM	ENSMUSG00000039670.3	ENSMUST00000137632.2	372	2	-120	-282	12	3	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGGCTTTTGTGTTGT	971	False	NA	-3	True	AATAAA	-21	NA	120348882	120347428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120347989_120348668
Isoform_81213_76	chrX	+	734	5	ISM	ENSMUSG00000031403.15	ENSMUST00000153844.8	657	7	4103	-62	-1793	29	3prime_fragment	FALSE	canonical	3	2668	junction_1	104.384804928687	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGAACCATGGGTGT	NA	False	NA	79	True	NA	NA	NA	74147761	74151911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784
Isoform_81218_83	chrX	+	825	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	27	1710	4	421	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGGTATCTTGGT	564	False	NA	NA	False	AATACA	-18	NA	74426031	74438355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
Isoform_81219_4	chrX	+	2544	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	14	4	-9	-4	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGGTCAGACTCCAC	551	False	NA	NA	False	AATAAA	-17	NA	74426018	74440061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
Isoform_81222_477	chrX	+	1563	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	29	3	11	-3	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTGACAATTTTTTC	NA	False	NA	11	True	ATTAAA	-17	NA	74557933	74578545	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
Isoform_8123_541	chr11	-	1196	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	8	1	8	-1	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCATGGCAGTCTG	NA	False	NA	-25	True	AATAAA	-16	NA	120440545	120433714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
Isoform_8124_8	chr11	-	1273	4	FSM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	-18	1	8	-1	multi-exon	FALSE	canonical	3	334	junction_3	32.7244387100664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCATGGCAGTCTG	NA	False	NA	-25	True	AATAAA	-16	NA	120440545	120433714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120434575_120434729_120434832_120435506_120435755_120440482
Isoform_81248_24	chrX	+	5159	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	77	-2	77	2	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554695	76706591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_81253_10	chrX	+	5439	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-205	0	-205	0	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554413	76706589	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_81259_13	chrX	+	5402	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-166	-2	-166	2	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554452	76706591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_81260_21	chrX	+	5230	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	5	-1	5	1	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76554623	76706590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
Isoform_81272_13	chrX	+	4065	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-64	6	-46	-6	multi-exon	TRUE	canonical	3	148	junction_2	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATGCTCTTACTTTGT	NA	False	NA	12	True	ATTAAA	-18	NA	80114257	80141472	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_80114767_80127896_80128038_80138057
Isoform_81275_3	chrX	+	4145	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-26	-112	-8	112	multi-exon	FALSE	canonical	3	148	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTATAGTTTTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	80114295	80141590	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_80114767_80127896_80128038_80138057
Isoform_81276_8	chrX	+	2165	7	FSM	ENSMUSG00000045103.20	ENSMUST00000132333.8	2133	7	-29	-3	-5	3	multi-exon	FALSE	canonical	3	317	junction_3	27.9011150713053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAAAGTACTG	NA	False	NA	NA	False	NA	NA	NA	84091895	84184345	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933
Isoform_81277_35	chrX	+	4503	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCTATTGGTTGG	NA	False	NA	13	True	AATAAA	-19	NA	84091924	84248648	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
Isoform_81281_756	chrX	+	1795	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	11	2	11	-2	multi-exon	FALSE	canonical	3	839	junction_1	0	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTGGAGAGTTTTCT	NA	False	NA	9	True	AATAAA	-21	NA	85235380	85239551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_85236581_85238956
Isoform_81283_9	chrX	+	1859	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	-53	2	-53	-2	multi-exon	FALSE	canonical	3	839	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTGGAGAGTTTTCT	NA	False	NA	9	True	AATAAA	-21	NA	85235316	85239551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_85236581_85238956
Isoform_81293_6	chrX	+	4681	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	205	2	205	-2	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGGTTGCCTTGTTTA	NA	False	NA	2	True	AATAAA	-15	NA	92718912	92793555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
Isoform_81296_5	chrX	+	1137	5	NIC	ENSMUSG00000043929.17	novel	627	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.9868375460475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278206	93297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93297545
Isoform_81297_6	chrX	+	2033	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	3	1908	0	-3	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278595	93297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
Isoform_81298_23	chrX	+	1282	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	-62	7	1	-3	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278533	93297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
Isoform_81299_3	chrX	+	1236	4	FSM	ENSMUSG00000043929.17	ENSMUST00000113908.8	1235	4	-4	3	-4	-3	multi-exon	FALSE	canonical	2	6	junction_2	24.3447461820136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTCAGCAGCCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	93278528	93297666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_93278732_93278826_93279027_93296020_93296733_93297545
Isoform_81301_5	chrX	+	797	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	4296	7	-4296	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAAGGCTCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	93410729	93456271	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
Isoform_81302_135	chrX	+	907	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	-130	7	-2	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCCTGCTTTCTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	93410729	93460697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
Isoform_81303_3	chrX	+	838	8	NIC	ENSMUSG00000079508.9	novel	784	9	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	1	23	junction_7	153.64496578217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCTGGCCTGCTTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	93410729	93460694	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93460447
Isoform_81310_922	chrX	+	3842	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	1	-1	1	1	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139648	95212159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
Isoform_81311_47	chrX	+	3887	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	-44	-1	-44	1	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139603	95212159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
Isoform_81315_11	chrX	+	3880	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	453	878	7	-878	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATCCTTTCAAGGTG	NA	False	NA	5	True	TTTAAA	-42	NA	97981819	97991745	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_81317_34	chrX	+	913	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	432	3866	-14	20	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTCCTCTTAATGTT	NA	False	NA	46	True	AAGAAA	-18	NA	97981798	97988757	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_81318_4	chrX	+	4771	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	438	2	-8	-2	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAATTTGTGTCTGCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	97981804	97992621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_81319_3	chrX	+	928	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	378	3905	-68	-19	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTGTCATTTATATAAGA	NA	False	NA	7	True	ATTAAA	-17	NA	97981744	97988718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
Isoform_81323_3	chrX	+	4921	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	42	0	42	0	multi-exon	TRUE	canonical	3	27	junction_1	6.60016137511158	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086228	98118334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
Isoform_81324_21	chrX	+	3287	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	0	-29	0	29	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATGAGTGTAAACTAG	NA	False	NA	81	True	NA	NA	NA	98179735	98192626	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
Isoform_81327_21	chrX	+	3315	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	-32	-25	-32	25	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGAAATGAGTGTAAA	NA	False	NA	77	True	NA	NA	NA	98179703	98192622	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
Isoform_81329_3	chrX	+	4928	8	NIC	ENSMUSG00000059327.10	novel	5105	9	NA	NA	31	8	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	7.75912892228587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGCTCTTCCCACA	NA	False	NA	15	True	AATAAA	-26	NA	99019242	99444376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
Isoform_81330_3	chrX	+	4952	8	FSM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	-1	4	-1	-3	multi-exon	FALSE	canonical	1	5	junction_1	8.05339325111737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCTTGACATTATCTT	NA	False	NA	1	True	AATAAA	-12	NA	99019210	99444362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
Isoform_81333_212	chrX	+	1331	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	64	123	0	-123	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTATCCGCTGGTT	NA	False	NA	27	True	AATAAA	-30	NA	99537960	99559608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
Isoform_81334_18	chrX	+	1416	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	-21	123	-21	-123	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTATCCGCTGGTT	NA	False	NA	27	True	AATAAA	-30	NA	99537875	99559608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
Isoform_81336_3	chrX	+	1752	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	61	-295	-3	295	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCCTACCTAGTTCT	NA	False	NA	NA	False	TATAAA	-5	NA	99537957	99560026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
Isoform_8134_244	chr11	-	2563	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	293	5	-119	2	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTCACTGCTGCTTT	3660	False	NA	-9	True	AATAAA	-16	NA	120463786	120451128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_81343_62	chrX	+	4602	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	381	0	381	0	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669723	99770820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_81344_5	chrX	+	4739	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	240	4	240	-4	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTTGAAGGAGATCCTT	NA	False	NA	14	True	AATAAA	-18	NA	99669582	99770816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
Isoform_81345_8	chrX	+	1497	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	81	7	81	-7	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGAGGTGTTTTGAG	NA	False	NA	NA	False	ATTAAA	-15	NA	100427422	100429228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100427449_100427757
Isoform_81349_1559	chrX	+	2425	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	134	3	-46	-3	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473294	100492194	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
Isoform_8135_4060	chr11	-	2475	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	383	3	-29	-3	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	4060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCACTGCTGCTTTAT	3750	False	NA	-7	True	AATAAA	-18	NA	120463696	120451126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_81352_47	chrX	+	2456	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473293	100492197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
Isoform_81355_149	chrX	+	2422	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	3	397	junction_1	981.218107867263	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473296	100492196	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
Isoform_8136_85	chr11	-	2925	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	-65	1	-65	-1	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTGCTGCTTTATTT	3302	False	NA	-5	True	AATAAA	-20	NA	120464144	120451124	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
Isoform_81369_6	chrX	+	5244	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	3	-1407	1	-4	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATGGCTTGGTGTAGT	NA	False	NA	11	True	AATAAA	-16	NA	100683668	100727953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_81370_3	chrX	+	1395	4	FSM	ENSMUSG00000034160.14	ENSMUST00000150161.8	3087	4	-14	1706	0	3	multi-exon	FALSE	canonical	3	215	junction_1	65.0743164901996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	100683699	100696486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745
Isoform_81371_12	chrX	+	5354	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	1	-1	-1	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGTAGTTTG	NA	False	NA	14	True	AATAAA	-19	NA	100683698	100727956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
Isoform_81373_5	chrX	+	1366	4	FSM	ENSMUSG00000034160.14	ENSMUST00000155792.2	1333	4	-47	14	-1	3	multi-exon	FALSE	canonical	3	162	junction_1	90.0530707724926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	100683698	100696486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745
Isoform_81374_49	chrX	+	2019	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-23	-5	-23	1	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838238	100842249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
Isoform_81375_32	chrX	+	2028	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-23	1	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838238	100842249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
Isoform_81376_71	chrX	+	2202	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838238	100842247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
Isoform_81377_5	chrX	+	1941	6	FSM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	0	-1	0	1	multi-exon	FALSE	canonical	2	3	junction_4	112.716280989039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841947_100841990_100842072
Isoform_81378_5	chrX	+	2477	5	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-23	1	intron_retention	FALSE	canonical	3	236	junction_3	24.5662369930765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838238	100842249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100839695_100840283_100840444_100840965_100841368_100841707_100841990_100842072
Isoform_81379_10	chrX	+	2834	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	266	junction_2	15.121728296285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838219	100842247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100839695_100840283_100840444_100840965_100841990_100842072
Isoform_81380_3	chrX	+	3066	4	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-23	1	intron_retention	FALSE	canonical	3	236	junction_2	19.4307888557196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838238	100842249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100840444_100840965_100841368_100841707_100841990_100842072
Isoform_81381_4	chrX	+	3924	2	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	283	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_100841990_100842072
Isoform_81382_8	chrX	+	559	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	-71	1	-71	-1	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTGTTTTCTATTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	101162981	101171274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
Isoform_81383_218	chrX	+	424	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	65	0	-57	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101163117	101171275	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
Isoform_81384_74	chrX	+	459	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	28	2	28	1	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAAGTGTTTTCTATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	101163080	101171273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
Isoform_81386_5	chrX	+	1557	9	FSM	ENSMUSG00000067562.12	ENSMUST00000118218.8	1611	9	62	-8	62	8	multi-exon	FALSE	canonical	0	0	junction_2	65.1257197656963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846630	101853556	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_101846761_101846861_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
Isoform_81388_3	chrX	+	3625	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	8	3742	8	-3742	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAGGAAAGGAAA	NA	False	NA	-6	True	NA	NA	NA	102400089	102435956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
Isoform_81389_6	chrX	+	3563	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	70	3742	70	-3742	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAGGAAAGGAAA	NA	False	NA	-6	True	NA	NA	NA	102400151	102435956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
Isoform_81393_8	chrX	+	817	7	FSM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	1	-6	1	6	multi-exon	FALSE	canonical	3	20	junction_2	4.2687494916219	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTTTCTGTGTCACTGT	NA	False	NA	7	True	AATAAA	-16	NA	102458073	102468192	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
Isoform_81394_6	chrX	+	1544	2	NIC	ENSMUSG00000085715.3	novel	3263	2	NA	NA	0	162	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAAAT	NA	False	NA	NA	False	TTTAAA	-27	NA	102491327	102526174	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_102491578_102524880
Isoform_81395_397	chrX	+	918	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	1701	0	325	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGACTGATCTTAGA	NA	False	NA	21	True	AATAAA	-18	NA	104123380	104127091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
Isoform_81396_74	chrX	+	963	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	-20	1695	-20	331	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGATCTTAGAAAGTAT	NA	False	NA	27	True	AATAAA	-24	NA	104123341	104127097	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
Isoform_81405_1307	chrX	+	466	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	43	492	27	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059348	105065564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105059477_105063184_105063310_105065351
Isoform_81406_534	chrX	+	490	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	19	492	3	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059324	105065564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105059477_105063184_105063310_105065351
Isoform_81410_3	chrX	+	4914	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	-56	8	-10	1	multi-exon	TRUE	canonical	2	29	junction_4	14.4839609212032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	105070871	105168524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
Isoform_81411_5	chrX	+	4911	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	-10	-1	-10	1	multi-exon	FALSE	canonical	2	41	junction_4	12.997138909572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	105070871	105168524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
Isoform_81413_1368	chrX	+	1761	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	56	8	-7	-8	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAAGTTTTTCCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	105230761	105247297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
Isoform_81414_230	chrX	+	1793	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	24	8	24	-8	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAAGTTTTTCCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	105230729	105247297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
Isoform_81418_7	chrX	+	2755	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	124	3	-20	-3	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGATTACTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	108139094	108206074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
Isoform_81419_45	chrX	+	1310	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	49	0	17	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221079	111282452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_81420_112	chrX	+	985	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	49	325	17	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221079	111282127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_81421_17	chrX	+	1041	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	-7	325	-7	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221023	111282127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_81422_4	chrX	+	1337	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	22	0	8	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221052	111282452	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
Isoform_81423_5	chrX	+	2559	13	FSM	ENSMUSG00000025592.18	ENSMUST00000067219.5	2520	13	-41	2	-36	-2	multi-exon	FALSE	canonical	0	0	junction_1	3.65148371670111	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATTTCTCTGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	112207912	112745588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112662516_112662601_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
Isoform_81424_4	chrX	+	883	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-140	0	-140	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGTCATTTTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	113814568	113815638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_113814900_113815086
Isoform_81425_5	chrX	+	769	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-26	0	-26	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGTCATTTTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	113814682	113815638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_113814900_113815086
Isoform_81426_3	chrX	+	2566	19	NIC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	3	-568	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	26.5271814941711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATTTTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	128650547	128942711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
Isoform_81429_22	chrX	+	3774	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-5	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	128650539	129361943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_81430_3	chrX	+	3912	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-89	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	128650401	129361943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_81431_5	chrX	+	3795	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	4	4640	4	-6	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAGTAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128650494	129361940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_81432_3	chrX	+	3739	27	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-3	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	29.6483333197509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGTAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	128650541	129361943	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
Isoform_81434_32	chrX	+	2728	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	-11	0	7	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132959952	132976612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
Isoform_81435_62	chrX	+	2583	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	134	0	15	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132960097	132976612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
Isoform_81440_70	chrX	+	4363	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	142	-3	5	3	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960087	132987571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81441_152	chrX	+	1999	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	139	2364	2	-1591	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGATATACATAAT	NA	False	NA	24	True	AATAAA	-24	NA	132960084	132985204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81443_60	chrX	+	4411	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	93	-2	-21	2	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	132960038	132987570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81444_122	chrX	+	2141	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	-3	2364	-3	-1591	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGATATACATAAT	NA	False	NA	24	True	AATAAA	-24	NA	132959942	132985204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81448_9	chrX	+	2505	11	ISM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	162	10183	15	0	5prime_fragment	FALSE	canonical	3	157	junction_8	166.206979396173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132960097	132976612	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261
Isoform_81451_28	chrX	+	4275	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	162	-776	15	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960097	132987571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81452_73	chrX	+	1908	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	162	1591	15	-1591	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGATATACATAAT	NA	False	NA	24	True	AATAAA	-24	NA	132960097	132985204	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81455_27	chrX	+	2052	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	20	1589	-8	-1589	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTGATATACATAATCC	NA	False	NA	26	True	AATAAA	-26	NA	132959955	132985206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
Isoform_81462_109	chrX	+	3142	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	83	2	12	0	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208915	133263386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_81463_26	chrX	+	3074	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	12	-1	12	0	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208915	133263386	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_81464_3	chrX	+	3144	23	NIC	ENSMUSG00000031262.13	novel	3309	13	NA	NA	32	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	59.0381057782539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208979	133263383	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_133209047_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_81465_4	chrX	+	3603	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-14	3	intron_retention	FALSE	canonical	3	156	junction_7	44.2429655425583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGAATTTTTTTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	133208889	133263391	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
Isoform_81467_1498	chrX	+	446	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	32	5	-3	-5	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	1498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCTGAAGTTTTTCTC	NA	False	NA	70	True	ATTAAA	-11	NA	133486434	133488800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
Isoform_81468_1310	chr3	+	392	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	-31	-40	-31	40	mono-exon	FALSE	NA	NA	NA	NA	NA	1310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8270	False	NA	NA	False	AATAAA	-15	NA	145584743	145585135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr3_+_145584700_145585100
Isoform_81478_117	chrX	+	2412	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-46	-2	15	2	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTGCATAGTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	133501988	133507805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
Isoform_81480_330	chrX	+	2367	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	61	-2	15	2	multi-exon	FALSE	canonical	3	597	junction_2	148.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTGCATAGTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	133501988	133507805	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133502083_133503440_133503512_133505603
Isoform_81483_4	chrX	+	2248	6	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	59.4151495832502	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618743	133622658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620823
Isoform_81484_12	chrX	+	2215	5	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618684	133622658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
Isoform_81485_13	chrX	+	2160	5	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAAAAAGCACTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	133618736	133622655	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
Isoform_81486_6	chrX	+	2272	5	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	26.9664142963057	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618743	133622658	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620823
Isoform_81488_29	chrX	+	2165	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-77	-3	-27	1	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618684	133622660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
Isoform_81489_17	chrX	+	2124	4	NNC	ENSMUSG00000033460.15	novel	2085	4	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618684	133622660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
Isoform_81491_9	chrX	+	2286	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	-39	6	-32	1	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618679	133622660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
Isoform_81492_11	chrX	+	2228	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	19	6	0	1	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCACTGTCTTTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	133618737	133622660	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
Isoform_81495_3	chrX	+	3358	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	1	-32	1	2	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTAGAGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	133657344	133662206	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
Isoform_81496_12	chrX	+	3830	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	29	-161	20	161	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203084	134213562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
Isoform_81497_10	chrX	+	3821	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	24	-168	24	168	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTATTGGTTCTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	134334607	134344747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
Isoform_81498_3	chrX	+	3498	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	24	155	24	-155	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAGAATGGAGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	134274056	134283820	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
Isoform_815_120	chr10	-	3197	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	7	0	-7	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAGAAAGTTTTCTGT	NA	False	NA	-12	True	AATAAA	-22	NA	40178182	40163460	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
Isoform_8150_28	chr11	-	1978	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	172	0	172	0	multi-exon	FALSE	canonical	3	51	junction_5	1338.58961597646	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472034	120468934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
Isoform_81502_10	chrX	+	3670	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	24	-17	24	17	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCATGAGATTCATTTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	134334607	134344596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
Isoform_81504_15	chrX	+	3830	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	29	-161	29	161	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395365	134405504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
Isoform_81505_5	chrX	+	2829	4	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.6789449880446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACATTGTTCCAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	134643459	134648070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134645667
Isoform_81507_20	chrX	+	2798	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-26	7	-26	-7	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAATGAAAACATTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	134643455	134648064	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
Isoform_81510_3	chrX	+	845	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	-11	3	-11	-3	multi-exon	TRUE	canonical	3	40	junction_5	28.5629130167075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAATAGATTCTTCT	NA	False	NA	NA	False	TTTAAA	-14	NA	134643470	134662736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
Isoform_81511_5	chrX	+	2732	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTTCCAGTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	134643479	134648074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_134643728_134645247_134645325_134645667
Isoform_81512_5	chrX	+	5313	7	ISM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	53409	7	-1446	1	3prime_fragment	TRUE	canonical	0	0	junction_1	59.1326193117358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9792	False	NA	11	True	AATAAA	-18	NA	134696890	134704216	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
Isoform_81514_8	chrX	+	3738	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	13	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	54.6669207311169	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACCCTTCTTCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	134739817	134745476	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
Isoform_81515_52	chrX	+	2796	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	17	-1	15	1	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	8	True	AATAAA	-19	NA	134786616	134791828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_81516_55	chrX	+	2695	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	117	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTGTTTGTGTATA	NA	False	NA	7	True	AATAAA	-18	NA	134786716	134791827	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_81519_7	chrX	+	2706	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	115	2	-15	1	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	False	NA	8	True	AATAAA	-19	NA	134786716	134791828	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
Isoform_81520_1489	chrX	+	781	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	49	7	49	-7	multi-exon	FALSE	canonical	3	2369	junction_2	964	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039793	135041185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135039916_135040271_135040349_135040603
Isoform_81523_90	chrX	+	823	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	7	7	7	-7	multi-exon	FALSE	canonical	3	2369	junction_2	964	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039751	135041185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135039916_135040271_135040349_135040603
Isoform_81526_30	chrX	+	815	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_2	2040.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039756	135041185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_135039916_135040271_135040349_135040606
Isoform_81527_148	chrX	+	778	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	49	-7	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_2	2040.5	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATATATGCTCAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	135039793	135041185	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_135039916_135040271_135040349_135040606
Isoform_8153_2048	chr11	-	1839	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	25	3	25	2	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGTGTGGTCTGTGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	120472425	120468932	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
Isoform_81532_371	chrX	+	963	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	46	10	46	-10	multi-exon	FALSE	canonical	3	2732	junction_2	36	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGAATCCAACAGCC	NA	False	NA	-2	True	AATAAA	-14	NA	135145873	135147878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135145977_135146449_135146516_135147084
Isoform_81536_306	chrX	+	1006	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	3	10	3	-10	multi-exon	FALSE	canonical	3	2732	junction_2	36	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGAATCCAACAGCC	NA	False	NA	-2	True	AATAAA	-14	NA	135145830	135147878	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135145977_135146449_135146516_135147084
Isoform_81542_188	chrX	+	874	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	37	19	-7	-5	multi-exon	FALSE	canonical	3	4289	junction_2	392	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGCCACAAGAAC	NA	False	NA	NA	False	AATAAA	-13	NA	135171046	135172708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135171151_135171558_135171632_135172011
Isoform_81543_975	chrX	+	829	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	37	64	-7	-6	multi-exon	FALSE	canonical	3	4289	junction_2	392	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTATTGTGTCCTTA	NA	False	NA	NA	False	AATAAA	-10	NA	135171046	135172663	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135171151_135171558_135171632_135172011
Isoform_81546_33	chrX	+	852	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	62	19	10	-5	multi-exon	FALSE	canonical	3	238	junction_2	2417.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGCCACAAGAAC	NA	False	NA	NA	False	AATAAA	-13	NA	135171063	135172708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135171151_135171558_135171632_135172016
Isoform_81548_158	chrX	+	828	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	-7	5	-7	-5	multi-exon	FALSE	canonical	3	533	junction_2	2270	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGCCACAAGAAC	NA	False	NA	NA	False	AATAAA	-13	NA	135171046	135172708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135171151_135171558_135171632_135172057
Isoform_81550_3	chrX	+	1197	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	0	1606	0	-1606	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATGTTTCTTCTGAAT	NA	False	NA	NA	False	AATAAA	-24	NA	135608730	135610621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135608838_135609531
Isoform_81551_4	chrX	+	1976	4	FSM	ENSMUSG00000031428.12	ENSMUST00000101227.3	2045	4	47	22	47	-22	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAATTAAAAAGAAAAA	7952	False	NA	NA	False	NA	NA	NA	135893954	135896843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_135894154_135894455_135894511_135894679_135894820_135895261
Isoform_81554_1365	chrX	+	998	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	178	2	178	-2	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234609	138238916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_81555_20	chrX	+	1109	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	67	2	67	-2	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234498	138238916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_81556_18	chrX	+	1156	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	22	0	22	0	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTCACGTTAACGT	NA	False	NA	20	True	AATAAA	-21	NA	138234453	138238918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_138235157_138237570_138237800_138238694
Isoform_81562_21	chrX	+	2740	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	0	10	0	-3	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGTATCTGGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	138511368	138573884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
Isoform_81564_811	chrX	+	1953	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	12	0	12	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357373	139376889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
Isoform_81568_36	chrX	+	2123	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	1	78	1	-3	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTTTGGTTGAGAACT	NA	False	NA	NA	False	AATAAA	-13	NA	139857656	139947188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
Isoform_81572_169	chrX	+	2532	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCAAGTCTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	141009764	141022687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_81573_8	chrX	+	2435	4	NIC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	108.812785196512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTCAAGTCTTTCT	NA	False	NA	9	True	AATAAA	-20	NA	141009773	141022686	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_141009928_141011286_141011378_141019779_141019925_141020641
Isoform_81574_4	chrX	+	2459	5	FSM	ENSMUSG00000042271.14	ENSMUST00000042329.12	2447	5	-8	-4	-8	4	multi-exon	FALSE	canonical	3	12	junction_1	115.070358911407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCTTTCTTAAGGT	NA	False	NA	15	True	AATAAA	-26	NA	141010924	141022692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_141011010_141011286_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_81575_48	chrX	+	2456	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	27	1	-23	-1	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCAAGTCTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	141011199	141022687	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
Isoform_81576_3	chrX	+	2713	2	ISM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-6	153380	-3	-86432	5prime_fragment	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141464407	141467854	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_141464553_141465286
Isoform_81577_3	chrX	+	5316	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-35	-132	-23	132	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464378	141621366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_81578_6	chrX	+	4483	7	NNC	ENSMUSG00000047045.18	novel	1742	7	NA	NA	0	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	43.1496105299792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTTTGAATCTTAGCC	NA	False	NA	14	True	AATAAA	-21	NA	141464401	141621240	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180_141619688_141619712
Isoform_81579_21	chrX	+	4665	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	-31	5124	-31	132	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464370	141621366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_81581_3	chrX	+	4583	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	-8	-132	1	132	multi-exon	FALSE	canonical	0	0	junction_1	49.9218138692896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464402	141621366	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
Isoform_81583_5	chrX	+	1601	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	196	5	0	-5	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	143100995	143108188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
Isoform_81585_51	chrX	+	4136	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	29	3	29	2	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143101047	143157443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81587_5	chrX	+	4115	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	299.952273536975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143100997	143157441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81589_13	chrX	+	425	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	22	32	2	-5	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCCCTAAGTCCAGTT	NA	False	NA	8	True	AATAAA	-15	NA	143101020	143107141	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
Isoform_81590_9	chrX	+	1490	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	4	-1015	4	-5	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	143101002	143108188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
Isoform_81593_153	chrX	+	4061	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143101018	143157443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81597_5	chrX	+	3655	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-34	-461	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGCAATGAATGTACAA	NA	False	NA	NA	False	TTTAAA	-34	NA	143100961	143156980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81598_24	chrX	+	4000	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	266.015115360011	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143101008	143157441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81599_59	chrX	+	3856	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	2	combination_of_known_junctions	TRUE	canonical	3	134	junction_1	227.828696459765	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118806	143157443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81601_6	chrX	+	3759	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_19	302.220546917654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143118831	143157440	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81604_55	chrX	+	3908	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17945	3	99	2	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118963	143157443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81607_11	chrX	+	3847	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	91	2	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118955	143157443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
Isoform_81611_13	chrX	+	2042	7	FSM	ENSMUSG00000095872.8	ENSMUST00000178833.2	1350	7	-93	-599	-93	-2	multi-exon	TRUE	canonical	0	0	junction_3	6.15539510420646	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTGTTTGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	146572630	146616450	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_146572740_146589721_146589848_146590566_146590647_146594315_146595275_146608125_146608208_146609013_146609064_146615814
Isoform_81612_5	chrX	+	2046	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	-17	-1	-17	1	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTTGTGTGTGTGT	1192	False	NA	NA	False	AATAAA	-20	NA	146963702	147007707	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
Isoform_81613_17	chrX	+	2042	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-17	0	-17	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147665554	147707135	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
Isoform_81615_9	chrX	+	2042	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177554.2	2028	7	-16	2	-16	-2	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	147880931	147921146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_147881040_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
Isoform_81616_30	chrX	+	1993	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377549	148419760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
Isoform_81617_3	chrX	+	1981	7	NNC	ENSMUSG00000072923.7	novel	1977	7	NA	NA	-4887	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.06622805119022	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTGTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	148372678	148419758	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_148372777_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
Isoform_81618_73	chrX	+	2046	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	0	-17	0	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	148567451	148609690	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
Isoform_81620_11	chrX	+	2043	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148724633	148767978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
Isoform_81621_9	chrX	+	2057	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	17.6227126175286	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTCTTTCATTGTT	NA	False	NA	16	True	AATAAA	-34	NA	149371242	149426871	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_81622_35	chrX	+	1903	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_81625_84	chrX	+	4248	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-249	2	-249	-2	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149829916	149872515	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_81630_49	chrX	+	4414	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-249	-164	-249	164	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149829916	149872681	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_81633_26	chrX	+	4439	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-276	-162	-276	162	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGGTCTTAAGCCTCA	NA	False	NA	10	True	ATTAAA	-19	NA	149829889	149872679	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
Isoform_8165_965	chr11	-	1148	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-4	2383	-4	5	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTGGTCCATCCTGCT	4302	False	NA	-2	True	AATAAA	-24	NA	120489195	120485329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
Isoform_81651_5	chrX	+	3061	15	ISM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	18	4003	18	-4003	5prime_fragment	FALSE	canonical	2	7	junction_7	3.90447153391899	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAATAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	150127188	150250835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794
Isoform_81652_7	chrX	+	1272	5	NNC	ENSMUSG00000025262.9	novel	5823	15	NA	NA	55	-66102	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	5.22015325445528	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTTTGTCAGGTATT	NA	False	NA	NA	False	NA	NA	NA	150127225	150188736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150188630
Isoform_81654_6	chrX	+	5734	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	-10	4	-4	-2	multi-exon	FALSE	canonical	3	62	junction_12	12.6336842339938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTTGCTTGACAT	NA	False	NA	2	True	GATAAA	-15	NA	150304172	150416851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
Isoform_81656_3	chrX	+	5462	21	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-22	-1	combination_of_known_junctions	TRUE	canonical	3	39	junction_12	14.924727803213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTTGCTTGACATT	NA	False	NA	3	True	GATAAA	-16	NA	150304142	150416852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
Isoform_81657_3	chrX	+	2222	11	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	89450	528	440	-528	3prime_fragment	FALSE	canonical	3	472	junction_4	65.3088049193981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150707693	150717885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
Isoform_81658_558	chrX	+	905	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	56	1	56	-1	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGCAGTCTTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	150784896	150787437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
Isoform_8167_74	chr11	-	1293	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-151	2385	-151	3	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTCTGGTCCATCCTG	4155	False	NA	-4	True	AATAAA	-22	NA	120489342	120485331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
Isoform_81670_34	chrX	+	3939	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	26	726	26	-726	multi-exon	TRUE	canonical	3	535	junction_3	101.202320735358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTAATCTAAATTT	NA	False	NA	15	True	AATAAA	-19	NA	150799449	150844964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
Isoform_81676_20	chrX	+	3611	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	52	-726	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTAATCTAAATTT	NA	False	NA	15	True	AATAAA	-19	NA	150799475	150844964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
Isoform_81680_54	chrX	+	5669	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	14	766	-11	1	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAGAAAAAAAAAAGCA	NA	False	NA	22	True	AATAAA	-32	NA	151016238	151056765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81681_23	chrX	+	5712	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	17	720	-8	43	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAATTTTATTTTATT	NA	False	NA	23	True	AAAAAG	-29	NA	151016241	151056811	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81682_18	chrX	+	5797	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	9	643	9	120	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTTCTGAAGTGCAT	NA	False	NA	34	True	AATAAA	-37	NA	151016233	151056888	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81683_10	chrX	+	6453	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	-6	2	-6	-2	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTTGTGTCTGCCT	NA	False	NA	18	True	NA	NA	NA	151016218	151057529	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81684_20	chrX	+	5678	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	223	-1	-11	1	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAGAAAAAAAAAAGCA	NA	False	NA	22	True	AATAAA	-32	NA	151016238	151056765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
Isoform_81686_6	chrX	+	6448	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	212	-760	3	-7	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCGCTCCTTTTGTGTC	NA	False	NA	13	True	NA	NA	NA	151016227	151057524	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
Isoform_81687_3	chrX	+	5660	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-8	104	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTGGAAACA	NA	False	NA	18	True	AATAAA	-21	NA	151016216	151056872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81688_3	chrX	+	5650	25	FSM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	-32	-98	11	98	multi-exon	FALSE	canonical	3	15	junction_2	115.294181396499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	NA	False	NA	12	True	AATAAA	-15	NA	151016235	151056866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81689_3	chrX	+	5549	25	FSM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	-32	3	11	1	multi-exon	FALSE	canonical	3	15	junction_2	115.294181396499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAGAAAAAAAAAAGCA	NA	False	NA	22	True	AATAAA	-32	NA	151016235	151056765	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
Isoform_81690_12	chrX	+	1712	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	-119	-7	-54	7	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTGACATGGATTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	151564862	151591649	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
Isoform_81693_8	chrX	+	2221	2	FSM	ENSMUSG00000067215.6	ENSMUST00000095755.4	2204	2	1	-18	1	18	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTGAAAAAGAAGAGAA	8833	False	NA	NA	False	NA	NA	NA	151789465	151792430	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_151789541_151790284
Isoform_81695_3	chrX	+	1403	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	-14	-614	3	614	multi-exon	FALSE	canonical	3	163	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTCTAAATTCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	152506608	152512798	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_152506934_152508700_152508838_152511857
Isoform_81696_36	chrX	+	774	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	46	-32	9	32	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	41	True	AATAAA	-16	NA	152506631	152524292	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
Isoform_81697_20	chrX	+	713	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	6	627	6	29	multi-exon	FALSE	canonical	3	65	junction_2	49	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGTTAGAGCTATACGA	NA	False	NA	38	True	AATAAA	-13	NA	152506611	152524289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_152506934_152508700_152508838_152524035
Isoform_81701_118	chrX	+	1553	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	53	146	-9	-138	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCACTTTGCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	154045491	154080504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_81703_66	chrX	+	1690	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	54	8	-8	0	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGATTGTGAGTCTCC	NA	False	NA	18	True	AATAAA	-12	NA	154045492	154080642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_81704_11	chrX	+	1604	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	1	147	1	-139	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154045439	154080503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
Isoform_81708_13	chrX	+	2780	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-2	4466	-2	38	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTATTTTTATAGG	NA	False	NA	12	True	AATAAA	-15	NA	158038851	158146774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_81709_3	chrX	+	3057	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-19	4206	-19	298	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158038834	158147034	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_81712_55	chrX	+	3211	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	35	1926	35	-1926	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGGTTTTTTGTTT	5382	False	NA	NA	False	AATAAA	-15	NA	158155208	158170998	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
Isoform_81713_612	chrX	+	911	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	35	4226	35	-4226	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGACTAAGCCCTGCC	5382	False	NA	12	True	AATAAA	-24	NA	158155208	158168698	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
Isoform_8172_70	chr11	-	1873	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	28	-20	0	20	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAAACTGGAACCGGT	NA	False	NA	14	True	AATAAA	-36	NA	120508734	120500892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_8173_28	chr11	-	1808	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	8	-330	-4	0	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508743	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81731_4	chrX	+	1532	9	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-69	-3536	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	40.2241764987178	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGACACTTAGATTTG	NA	False	NA	NA	False	NA	NA	NA	158197498	158266083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955
Isoform_81732_5	chrX	+	1355	9	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	108	-3536	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	40.2241764987178	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGACACTTAGATTTG	NA	False	NA	NA	False	NA	NA	NA	158197675	158266083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955
Isoform_81734_5	chrX	+	1424	10	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	134	-1406	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	37.9326889224701	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAGAAAAGAAAAGCAG	NA	False	NA	NA	False	TATAAA	-30	NA	158197701	158272368	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272
Isoform_81740_4	chrX	+	3999	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-37	30419	14	10086	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTGTGTGGTCATATC	NA	False	NA	23	True	NA	NA	NA	158315677	158344971	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
Isoform_81743_3	chrX	+	2150	9	ISM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	19	26476	19	-8492	5prime_fragment	FALSE	canonical	3	412	junction_8	92.8372231381357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTTGTAACTTCATT	NA	False	NA	NA	False	TATAAA	-17	NA	158315682	158349601	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423
Isoform_81745_22	chrX	+	3342	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	7	17	7	-17	multi-exon	TRUE	canonical	3	339	junction_9	109.675027103931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTTACCTGGCAGTT	NA	False	NA	6	True	AATAAA	-19	NA	158315670	158376060	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
Isoform_81747_8	chrX	+	3376	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	21	True	AATAAA	-34	NA	158315677	158376075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
Isoform_81748_5	chrX	+	3259	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGTGAGAGCATTCT	NA	False	NA	20	True	AATAAA	-33	NA	158315680	158376074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
Isoform_81749_8	chrX	+	3287	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	196.729703880448	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315681	158376077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
Isoform_8175_17	chr11	-	2416	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508734	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81750_7	chrX	+	3325	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-20	-7	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	151.634892079191	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315694	158376070	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
Isoform_81753_3	chrX	+	3459	18	NNC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	6.05968012220043	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGGGGGGAATTGGA	NA	False	NA	16	True	AATAAA	-21	NA	158410219	158757163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702757_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
Isoform_81754_7	chrX	+	3949	34	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	18.7602436052563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATTTGTAGACTCA	NA	False	NA	6	True	CATAAA	-17	NA	159285152	159374136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_81757_18	chrX	+	4125	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	7	1	7	-1	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATTTGTAGACTCA	NA	False	NA	6	True	CATAAA	-17	NA	159285436	159374136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
Isoform_8176_14	chr11	-	2239	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	184	junction_6	81.3758000472704	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508741	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81762_3262	chrX	+	1879	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	61	304	1	32	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	3262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTGTTTTGTTC	NA	False	NA	0	True	AATAAA	-7	NA	161543458	161561784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
Isoform_81763_420	chrX	+	1969	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-29	304	-29	32	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTGTTTTGTTC	NA	False	NA	0	True	AATAAA	-7	NA	161543368	161561784	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
Isoform_81764_57	chrX	+	2184	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	61	-1	1	1	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATATCTGCATCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	161543458	161562089	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
Isoform_8177_7	chr11	-	2209	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	99	junction_6	93.9507520015295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508765	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81777_88	chrX	+	2197	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-24	1180	3	9	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGAAAGTGGTTTTGTG	NA	False	NA	20	True	ATTAAA	-26	NA	161684603	161814324	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
Isoform_81779_14	chrX	+	2370	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-263	992	2	14	multi-exon	TRUE	canonical	2	41	junction_1	44.8724185955837	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGTTTTGTGTTTTC	NA	False	NA	25	True	ATTAAA	-31	NA	161684602	161814329	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
Isoform_8178_18	chr11	-	2659	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	2	1	intron_retention	FALSE	canonical	3	226	junction_6	61.2106510474516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	-5	True	AATAAA	-17	NA	120508732	120500911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81782_6	chrX	+	3356	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-157	0	-29	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162691983	162712542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
Isoform_81783_20	chrX	+	3203	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-4	0	-1	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692136	162712542	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
Isoform_81785_4	chrX	+	2377	2	FSM	ENSMUSG00000031379.14	ENSMUST00000127685.2	439	2	53	-1991	-9	1991	multi-exon	FALSE	canonical	3	305	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	163052559	163056861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163052674_163054598
Isoform_81786_101	chrX	+	1256	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	115	228	-1	-228	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTTTTTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	163052541	163155779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_81788_16	chrX	+	1370	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	118	111	2	-111	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAAATATTTCCTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	163052544	163155896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_81789_4	chrX	+	1431	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	63	105	-17	-105	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCCTGATACATGC	NA	False	NA	NA	False	AATAAA	-22	NA	163052489	163155902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_8179_4	chr11	-	2354	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-1	4	intron_retention	FALSE	canonical	3	48	junction_6	111.456144838327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTCCCGACCCCGGGA	NA	False	NA	-2	True	AATAAA	-20	NA	120508752	120500908	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81790_6	chrX	+	1484	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	115	0	-1	0	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	False	NA	NA	False	TATAAA	-15	NA	163052541	163156007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_81791_9	chrX	+	1208	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	2	-228	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	81.4048524352203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTTTTTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	163052544	163155779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163141143_163141227_163152041_163152109_163155448
Isoform_81792_4	chrX	+	1087	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	13	-228	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	80.2507788124203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTTTTTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	163052581	163155779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_163052674_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
Isoform_81793_8	chrX	+	3186	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	31	-5	11	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202813	163216912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_81794_43	chrX	+	3563	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	31	0	11	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202813	163216912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
Isoform_81799_3	chrX	+	1200	6	ISM	ENSMUSG00000031382.15	ENSMUST00000033755.6	1369	7	7681	-3	7681	3	3prime_fragment	FALSE	canonical	1	1	junction_1	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTTTTAATTTAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	163228734	163242163	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_+_163228805_163233450_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
Isoform_818_48	chr10	-	3316	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	216	2	-3	-2	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGCTGAGTTCATTG	NA	False	NA	-5	True	AATAAA	-17	NA	40759091	40707618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
Isoform_8180_5	chr11	-	2473	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	99	junction_5	98.1063198779773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508734	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_81800_5	chrX	+	2402	9	FSM	ENSMUSG00000047757.18	ENSMUST00000057150.8	2395	9	-9	2	-9	1	multi-exon	FALSE	canonical	0	0	junction_7	35.8468966578698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	163763698	163780266	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778419_163778974_163779118_163779765
Isoform_81801_97	chrX	+	2854	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	97	2	-23	-2	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	163763684	163780263	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
Isoform_81802_3	chrX	+	1319	5	FSM	ENSMUSG00000040621.15	ENSMUST00000087169.11	1928	5	-78	687	-37	3	multi-exon	FALSE	canonical	1	1	junction_1	20.8371663140649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCTACATTTTTATTA	NA	False	NA	NA	False	CATAAA	-21	NA	164953412	164972819	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_164953547_164961529_164961639_164961787_164961827_164963348_164963806_164972239
Isoform_81803_5	chrX	+	1136	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	21	705	-17	3	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCACGTGTCATTTAT	NA	False	NA	NA	False	CATAAA	-5	NA	164953470	164972803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
Isoform_81804_4	chrX	+	1853	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	19	-10	19	10	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTACAACTGCGGCT	NA	False	NA	NA	False	NA	NA	NA	164953468	164973518	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
Isoform_81805_76	chrX	+	1408	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	93	junction_3	62.5634677747326	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATGTGGTCATTTGAT	NA	False	NA	6	True	AATAAA	-11	NA	165223771	165236133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_165223836_165229786_165229899_165232783_165232928_165233623_165233711_165235132
Isoform_81806_4	chrX	+	851	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	-30	573	at_least_one_novel_splicesite	TRUE	non_canonical	1	93	junction_3	62.5634677747326	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGAAATGAGTTATTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	165223741	165235546	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_165223836_165229786_165229899_165232783_165232928_165233623_165233711_165235132
Isoform_8181_8	chr11	-	2910	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	6	0	intron_retention	FALSE	canonical	3	226	junction_5	62.8630256987365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508689	120500912	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
Isoform_8182_7	chr11	-	766	3	FSM	ENSMUSG00000025137.16	ENSMUST00000126148.2	513	3	-7	-246	-4	246	multi-exon	FALSE	canonical	3	395	junction_2	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120508743	120505755	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120506279_120506674_120506764_120508589
Isoform_81820_3	chrX	+	3463	5	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTAGATGTCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72160673	72172867	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
Isoform_81823_29	chrX	+	847	2	Genic_Genomic	ENSMUSG00000072249.4	novel	847	1	NA	NA	-19449	-8	multi-exon	TRUE	canonical	3	217	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAAGTATCAAATTGA	NA	False	NA	22	True	AATAAA	-22	NA	8909804	8930092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_8909865_8929305
Isoform_81824_3	chrX	+	949	2	Intergenic	novelGene_2179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATGAAAAATAAATTGAAA	9258	False	NA	NA	False	NA	NA	NA	100739441	100744033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_100739530_100743172
Isoform_81827_3	chrX	+	1040	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	612	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	7	True	NA	NA	NA	20828352	20853588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
Isoform_8183_4	chr11	-	1845	11	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	26.3286915740224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTGTCCCGATGACT	NA	False	NA	-3	True	ATTAAA	-13	NA	120515818	120509199	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_81833_3	chrX	+	2129	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	22.4049597683688	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTCTTTCATTGTTC	NA	False	NA	17	True	AATAAA	-35	NA	149371242	149426872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_149371410_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_81834_4	chrX	+	1966	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-8	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	17.7330827049958	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATTTCTTCTTTCA	NA	False	NA	11	True	AATAAA	-29	NA	149371242	149426866	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_149371410_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
Isoform_81835_5	chrX	+	864	6	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-5670	-9593	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	102.568221199356	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGTAAGCTAATACC	NA	False	NA	NA	False	NA	NA	NA	159940075	159975436	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199
Isoform_81836_5	chrX	+	2504	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-119	38	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTATTTTTATAGG	NA	False	NA	12	True	AATAAA	-15	NA	158038658	158146774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
Isoform_81837_3	chrX	+	688	2	Fusion	ENSMUSG00000041245.14_ENSMUSG00000086286.2	novel	379	2	NA	NA	-194	26738	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAACTGAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	149952501	149981498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Fusion_chrX_+_149952709_149981017
Isoform_81838_3	chrX	+	1027	2	Intergenic	novelGene_2163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	63977044	63982200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_63977270_63981398
Isoform_81839_6	chrX	+	1118	3	Intergenic	novelGene_2164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	63977044	63982200	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_63977270_63977673_63977765_63981398
Isoform_8184_3	chr11	-	1778	9	ISM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	15	0	0	0	intron_retention	FALSE	canonical	2	56	junction_8	11.0113577727726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515825	120509197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498
Isoform_81840_6	chrX	+	663	6	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-31	611	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	44.9310583004674	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCATGGTCATTGTGT	NA	False	NA	6	True	NA	NA	NA	20828321	20853587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_20828369_20828775_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
Isoform_81843_3	chrX	+	759	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3144	71	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTTAAAGAGTCA	NA	False	NA	24	True	AATAAA	-36	NA	70856385	70864661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
Isoform_81845_5	chrX	+	963	2	Genic_Genomic	ENSMUSG00000051851.6	novel	401	1	NA	NA	-128	695	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGGAGTCTTACT	NA	False	NA	NA	False	AATAAA	-17	NA	52609870	52611094	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_52610392_52610652
Isoform_81846_4	chrX	+	537	2	Intergenic	novelGene_2173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTCTGGTTGTGG	NA	False	NA	13	True	NA	NA	NA	88052099	88080610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_88052327_88080300
Isoform_81847_5	chrX	+	786	4	NNC	ENSMUSG00000006200.4	novel	1010	4	NA	NA	301	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	87.0899917709645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTTGGCTCCATTGT	NA	False	NA	9	True	AATAAA	-13	NA	36916087	36918729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_36916139_36916242_36916703_36917291_36917338_36918500
Isoform_81848_3	chrX	+	1646	3	Genic_Genomic	ENSMUSG00000094861.2	novel	1035	1	NA	NA	-963	471	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCCAGTGTCTCTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	90435142	90437611	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_90435200_90435916_90435973_90436078
Isoform_81849_3	chrX	+	3456	15	NNC	ENSMUSG00000031337.17	novel	3469	3	NA	NA	4085	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	90.9078082005981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAACAGTATTTCCAG	NA	False	NA	4	True	AATAAA	-36	NA	70262775	70358889	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chrX_+_70262942_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
Isoform_8185_33	chr11	-	1698	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	29	0	-1	0	multi-exon	FALSE	canonical	2	54	junction_9	11.3376897945103	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515811	120509197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
Isoform_81854_24	chrX_GL456233v2_random	-	1424	8	Intergenic	novelGene_2225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGCACATAGTTTAATAC	NA	False	NA	-8	True	AATAAA	-22	NA	134108	106812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
Isoform_81855_7	chrX_GL456233v2_random	-	1601	8	Intergenic	novelGene_2224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAATGGAGCAAT	NA	False	NA	NA	False	AATAAA	-45	NA	134113	106640	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
Isoform_81860_3	chrX	-	179	1	Intergenic	novelGene_2187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGATCCT	NA	False	NA	NA	False	NA	NA	NA	105016653	105016474	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_105016500_105016700
Isoform_81861_27	chrX	+	861	1	NIC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	27	474	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	105059348	105060209	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_105059300_105060200
Isoform_81866_629	chrX	-	5168	1	Intergenic	novelGene_2188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	629	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGATGGAA	NA	False	NA	NA	False	NA	NA	NA	116231725	116226557	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_116226600_116231700
Isoform_8187_5	chr11	-	4896	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	21	6	21	-6	multi-exon	FALSE	canonical	3	302	junction_2	28	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGGTGGTATTTC	7379	False	NA	-7	True	AATAAA	-10	NA	120524405	120515948	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120520563_120520643_120520708_120524187
Isoform_81880_4	chrX	+	743	1	Intergenic	novelGene_2189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	120243680	120244423	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_120243700_120244400
Isoform_81881_3	chrX	-	937	1	Intergenic	novelGene_2190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	AATAAA	-18	NA	120244633	120243696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_120243700_120244600
Isoform_81882_5	chrX	-	2851	1	FSM	ENSMUSG00000055733.7	ENSMUST00000079490.6	2837	1	-4	-10	-4	10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTTCTTTTAATTATA	NA	False	NA	NA	False	AATAAA	-21	NA	121307102	121304251	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_121304300_121307100
Isoform_81883_8	chr10	+	171	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATTTAAAAAAA	9647	False	NA	NA	False	NA	NA	NA	77467665	77467836	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr10_+_77467700_77467800
Isoform_81887_4	chrX	-	188	1	Intergenic	novelGene_2194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATACAAGCATACAGG	NA	False	NA	NA	False	NA	NA	NA	128660519	128660331	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_128660300_128660500
Isoform_81888_17	chrX	-	188	1	Intergenic	novelGene_2195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGGAAGGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	129068218	129068030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_129068000_129068200
Isoform_81889_3	chrX	-	3238	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-2	4	-2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGAATTTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	7242071	7238833	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_7238800_7242100
Isoform_81890_5	chrX	+	176	1	Intergenic	novelGene_2196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133053556	133053732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_133053600_133053700
Isoform_81892_3	chrX	+	3225	1	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	18	1147	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133208921	133212146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_133208900_133212100
Isoform_81893_3	chrX	+	240	1	Intergenic	novelGene_2197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	133494003	133494243	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_133494000_133494200
Isoform_81894_14	chrX	+	408	1	NIC	ENSMUSG00000045427.14	novel	2426	3	NA	NA	15	-4737	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	133501988	133502396	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_133502000_133502400
Isoform_81897_79	chrX	+	1533	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	-4	3	-4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGTAGGTCCATTA	NA	False	NA	17	True	AATAAA	-14	NA	134894568	134896101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134894600_134896100
Isoform_81899_51	chrX	+	929	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	0	651	0	-651	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATGATTCTGTAAATCA	NA	False	NA	10	True	AATAAA	-19	NA	134934115	134935044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134934100_134935000
Isoform_819_4	chr10	-	1872	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	188	1474	-14	-1474	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGATTTATAGGTAATC	NA	False	NA	NA	False	ATTAAA	-15	NA	40759119	40709090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
Isoform_81900_41	chrX	+	1580	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTTGCTTCCTTTAT	NA	False	NA	22	True	AATAGA	-16	NA	134934115	134935695	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_134934100_134935700
Isoform_81918_10	chrX	+	611	1	FSM	ENSMUSG00000079871.5	ENSMUST00000115987.3	360	1	-94	-157	-94	157	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATATTGAGTGTTGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	12518447	12519058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12518400_12519100
Isoform_81920_12	chrX	-	181	1	Intergenic	novelGene_2201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTATGGTCA	NA	False	NA	NA	False	NA	NA	NA	143072079	143071898	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_143071900_143072100
Isoform_81922_3	chrX	-	188	1	Intergenic	novelGene_2143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTCTTGATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	12595201	12595013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_12595000_12595200
Isoform_81923_3	chrX	-	1943	1	Intergenic	novelGene_2202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAAAACATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	148880273	148878330	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_148878300_148880300
Isoform_81924_4	chrX	+	192	1	Intergenic	novelGene_2203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCTACCCCGG	9277	False	NA	NA	False	NA	NA	NA	149793733	149793925	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_149793700_149793900
Isoform_81925_6	chrX	+	157	1	Intergenic	novelGene_2144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	12715050	12715207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_12715000_12715200
Isoform_81926_4	chrX	-	172	1	Intergenic	novelGene_2204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATTTAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	149956229	149956057	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_149956100_149956200
Isoform_81927_201	chrX	-	555	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	-39	-33	-39	33	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTCCCAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	149998684	149998129	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_149998100_149998700
Isoform_81929_12	chr5	+	177	1	FSM	ENSMUSG00000105613.2	ENSMUST00000199279.2	6573	1	3136	3260	3136	-3260	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCTATAATTTC	NA	False	NA	NA	False	NA	NA	NA	122920723	122920900	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr5_+_122920700_122920900
Isoform_81930_3	chrX	+	3807	1	NIC	ENSMUSG00000025262.9	novel	5463	16	NA	NA	42	-123819	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAGCAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150127212	150131019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_150127200_150131000
Isoform_81931_8	chr16	+	181	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	13691481	13691662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr16_+_13691500_13691700
Isoform_81933_3	chrX	-	639	1	Antisense	novelGene_ENSMUSG00000025332.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151057525	151056886	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_-_151056900_151057500
Isoform_81934_13	chrX	-	200	1	Intergenic	novelGene_2206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACATAG	NA	False	NA	NA	False	NA	NA	NA	151592111	151591911	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_151591900_151592100
Isoform_81937_22	chrX	-	452	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	166	-36	166	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	151692950	151692498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151692500_151693000
Isoform_81938_21	chrX	-	522	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	96	-36	96	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	151693020	151692498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151692500_151693000
Isoform_81942_31	chrX	-	1403	1	FSM	ENSMUSG00000047238.5	ENSMUST00000051484.5	1410	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAATGTTTTGTTCATT	NA	False	NA	NA	False	AATAAA	-10	NA	151820571	151819168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_151819200_151820600
Isoform_81943_3	chrX	-	235	1	Intergenic	novelGene_2207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATTTTCCTAATCCTTG	NA	False	NA	NA	False	AAAAAG	-35	NA	151994161	151993926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_151993900_151994200
Isoform_81945_3	chrX	-	176	1	Intergenic	novelGene_2208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGGGAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	152002020	152001844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_152001800_152002000
Isoform_81946_15	chrX	+	1669	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	-4	-408	-4	408	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTTTTTTGGTCTCTG	NA	False	NA	4	True	AATAAA	-29	NA	12803106	12804775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12803100_12804800
Isoform_81947_16	chrX	+	1602	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	63	-408	63	408	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTTTTTTGGTCTCTG	NA	False	NA	4	True	AATAAA	-29	NA	12803173	12804775	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_12803200_12804800
Isoform_81948_5	chrX	+	3326	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-14	32	-14	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAATAA	7318	False	NA	-19	True	ATTAAA	-8	NA	152281208	152284534	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_152281200_152284500
Isoform_81949_7	chrX	-	177	1	Intergenic	novelGene_2209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGAATCCTA	4297	False	NA	NA	False	NA	NA	NA	152291181	152291004	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_152291000_152291200
Isoform_81952_3	chrX	-	180	1	Intergenic	novelGene_2210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	154097120	154096940	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_154096900_154097100
Isoform_81953_3	chrX	-	177	1	Intergenic	novelGene_2211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	154953307	154953130	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_154953100_154953300
Isoform_81955_6	chrX	-	2868	1	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	0	-23313	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	AAAAAG	-14	NA	156275040	156272172	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_156272200_156275000
Isoform_81956_6	chrX	-	2868	1	FSM	ENSMUSG00000091736.4	ENSMUST00000065806.5	2867	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTTGCTTGTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	156351981	156349113	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_156349100_156352000
Isoform_81957_3	chrX	-	181	1	Intergenic	novelGene_2212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTCCATCT	NA	False	NA	NA	False	NA	NA	NA	156435768	156435587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_156435600_156435800
Isoform_81958_5	chrX	+	3016	1	FSM	ENSMUSG00000047485.7	ENSMUST00000087157.5	1935	1	-564	-517	-564	517	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAAAATGAG	NA	False	NA	NA	False	ATTAAA	-34	NA	156600866	156603882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_156600900_156603900
Isoform_8196_16	chr11	-	1377	9	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	0	-1223	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATCTCTCAGTGCTGTG	NA	False	NA	NA	False	AGTAAA	-12	NA	120534574	120527760	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_81961_4	chrX	-	235	1	Intergenic	novelGene_2213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCTGGAATCCCAAT	NA	False	NA	NA	False	NA	NA	NA	158189946	158189711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_158189700_158189900
Isoform_81962_3	chrX	-	529	1	Intergenic	novelGene_2214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAAATCC	NA	False	NA	NA	False	NA	NA	NA	158305341	158304812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_158304800_158305300
Isoform_81963_4	chrX	+	177	1	Intergenic	novelGene_2215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	158728139	158728316	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_158728100_158728300
Isoform_81965_16	chrX	-	229	1	Intergenic	novelGene_2216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGCCGTATGACCT	NA	False	NA	NA	False	NA	NA	NA	159552802	159552573	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_159552600_159552800
Isoform_81966_3	chrX	-	344	1	Intergenic	novelGene_2217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTACTGAC	NA	False	NA	NA	False	NA	NA	NA	161331380	161331036	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_161331000_161331400
Isoform_81967_7	chrX	+	191	1	Intergenic	novelGene_2218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	161491682	161491873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_161491700_161491900
Isoform_81969_4	chrX	-	178	1	Intergenic	novelGene_2219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161645265	161645087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_161645100_161645300
Isoform_8197_16	chr11	-	1560	9	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	0	-1040	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATTAAGGGTGTCAAG	NA	False	NA	6	True	NA	NA	NA	120534574	120527577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_81970_4	chrX	-	172	1	Intergenic	novelGene_2220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGATACAGTG	NA	False	NA	NA	False	NA	NA	NA	161718139	161717967	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_161718000_161718100
Isoform_81971_3	chrX	-	417	1	Intergenic	novelGene_2221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162691858	162691441	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_162691400_162691900
Isoform_81972_50	chrX	-	1023	1	Intergenic	novelGene_2222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAACAGTATTA	NA	False	NA	NA	False	NA	NA	NA	162836601	162835578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_162835600_162836600
Isoform_81974_4	chr13	-	211	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	96901432	96901221	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_96901200_96901400
Isoform_81975_24	chrX	+	196	1	Intergenic	novelGene_2223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165184566	165184762	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_165184600_165184800
Isoform_81976_9	chrX	+	798	1	Antisense	novelGene_ENSMUSG00000051224.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGGTCTGTAATAATAA	NA	False	NA	NA	False	AATAAA	-17	NA	165293179	165293977	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_+_165293200_165294000
Isoform_81978_2076	chrX	+	860	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	-22	-37	-22	37	mono-exon	FALSE	NA	NA	NA	NA	NA	2076	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAGAAAT	NA	False	NA	NA	False	CATAAA	-11	NA	165637184	165638044	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_165637200_165638000
Isoform_81983_12227	chrX	+	1293	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	-25	-58	-25	58	mono-exon	FALSE	NA	NA	NA	NA	NA	12227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	13068784	13070077	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_13068800_13070100
Isoform_81990_60	chrX	-	1083	1	Antisense	novelGene_ENSMUSG00000084349.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACTTCCCGGACGATG	2480	False	NA	NA	False	NA	NA	NA	13070077	13068994	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_-_13069000_13070100
Isoform_82_5	ERCC-00099	+	1343	1	FSM	ERCC-00099A	DQ875387	1344	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1344	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00099_+_0_1300
Isoform_8200_75	chr11	-	1801	7	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	461	-9	356	9	3prime_fragment	FALSE	canonical	3	976	junction_6	20.9735282889858	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCCAGTCAACCTATTT	NA	False	NA	-7	True	AATAAA	-22	NA	120534113	120530232	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
Isoform_82000_95	chrX	-	733	1	FSM	ENSMUSG00000083364.5	ENSMUST00000122000.2	393	1	-53	-287	-53	287	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGTGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	13084894	13084161	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_13084200_13084900
Isoform_82003_3	chrX	-	178	1	Intergenic	novelGene_2145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	13118479	13118301	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_13118300_13118500
Isoform_82011_3	chrX	-	344	1	Antisense	novelGene_ENSMUSG00000000787.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTCACTGAAAAAAAAATA	NA	False	NA	NA	False	AATACA	-41	NA	13160291	13159947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_-_13159900_13160300
Isoform_82012_3	chrX	+	173	1	Intergenic	novelGene_2146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	20071140	20071313	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_20071100_20071300
Isoform_82013_4	chrX	+	178	1	Intergenic	novelGene_2147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20190003	20190181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_20190000_20190200
Isoform_82014_5	chrX	-	751	1	Intergenic	novelGene_2162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGGAAAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	61128357	61127606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_61127600_61128400
Isoform_82016_163	chrX	-	339	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-56	-109	-56	109	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATTAGATAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	20447609	20447270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_20447300_20447600
Isoform_82020_3	chr7	+	174	1	Intergenic	novelGene_1860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTGGGTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	122535665	122535839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_+_122535700_122535800
Isoform_82021_8	chrX	+	908	1	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	80	-9900	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563449	7564357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_7563400_7564400
Isoform_82022_3	chrX	-	1268	1	NIC	ENSMUSG00000054737.12	novel	3130	5	NA	NA	1	-3057	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAACAAAACAAAAAA	3286	False	NA	NA	False	NA	NA	NA	20928241	20926973	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_20927000_20928200
Isoform_82023_12	chr7	-	180	1	Intergenic	novelGene_1784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29199392	29199212	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr7_-_29199200_29199400
Isoform_82024_3	chrX	-	2379	1	FSM	ENSMUSG00000080862.4	ENSMUST00000117260.2	558	1	-1	-1820	-1	1820	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAG	NA	False	NA	NA	False	AAAAAG	-27	NA	23231303	23228924	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_23228900_23231300
Isoform_82025_136	chrX	-	1062	1	FSM	ENSMUSG00000086691.3	ENSMUST00000121106.2	195	1	-57	-810	-57	810	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAATGAATTTATG	NA	False	NA	NA	False	NA	NA	NA	29313384	29312322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_29312300_29313400
Isoform_82027_3	chr5	-	2287	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGCTTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	89356998	89354711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr5_-_89354700_89357000
Isoform_8203_11	chr11	-	1903	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-1	-14	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	348.252664551683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534531	120530255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534406
Isoform_82030_7	chrX	-	172	1	Intergenic	novelGene_2149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATATTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35171151	35170979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_35171000_35171200
Isoform_82031_4	chr19	+	180	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	3728633	3728813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_3728600_3728800
Isoform_82033_5	chrX	-	204	1	Intergenic	novelGene_2150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGTTGATAAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	36030580	36030376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_36030400_36030600
Isoform_82036_7	chrX	+	203	1	Intergenic	novelGene_2151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGACAGAATCTATGTA	7518	False	NA	NA	False	NA	NA	NA	36344225	36344428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_36344200_36344400
Isoform_82039_4	chrX	-	198	1	Intergenic	novelGene_2152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAATTTTGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	36385160	36384962	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_36385000_36385200
Isoform_8204_440	chr11	-	1857	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-10	14	-10	-14	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534584	120530255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_82041_42	chrX	+	1228	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	-8	3	-8	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTCTTTCTTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	36454889	36456117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_36454900_36456100
Isoform_82042_648	chrX	-	819	1	FSM	ENSMUSG00000080241.4	ENSMUST00000116499.4	451	1	-100	-268	-100	268	mono-exon	FALSE	NA	NA	NA	NA	NA	648	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTTGAAAAAAAAAAAAGAA	NA	False	NA	0	True	AATAAA	-14	NA	36807850	36807031	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_36807000_36807800
Isoform_82044_3	chrX	+	810	1	NIC	ENSMUSG00000000355.14	novel	501	4	NA	NA	0	-4888	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	37689531	37690341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_+_37689500_37690300
Isoform_82047_3	chr4	+	176	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAGAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	85681792	85681968	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr4_+_85681800_85682000
Isoform_82048_4	chrX	-	175	1	Intergenic	novelGene_2153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAAAAAAAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	38781001	38780826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_38780800_38781000
Isoform_82049_11	chrX	-	2517	1	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-29484	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41000763	40998246	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_40998200_41000800
Isoform_8205_19	chr11	-	2265	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	0	-404	0	404	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	120534574	120529837	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
Isoform_82050_4	chrX	-	177	1	Intergenic	novelGene_2154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	41038757	41038580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_41038600_41038800
Isoform_82051_30	chrX	+	170	1	Intergenic	novelGene_2155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	41147522	41147692	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_41147500_41147700
Isoform_82052_7	chrX	+	200	1	Intergenic	novelGene_2156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTCCAACTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	42542423	42542623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_42542400_42542600
Isoform_82053_4	chrX	-	2588	1	NIC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-11	579	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	47297553	47294965	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_47295000_47297600
Isoform_82055_3	chrX	-	1108	1	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	6	-7248	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGTAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47683323	47682215	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_47682200_47683300
Isoform_82058_219	chrX	-	450	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-12	-30	-12	30	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	51861638	51861188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_51861200_51861600
Isoform_8206_38	chr11	-	1835	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	10	-14	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	343.012048339592	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534585	120530255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534528
Isoform_82060_6	chrX	+	771	1	Genic_Genomic	ENSMUSG00000073207.2	novel	NA	NA	NA	NA	-9	-7507	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51880067	51880838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_51880100_51880800
Isoform_82062_13895	chrX	+	949	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	-26	-41	-26	41	mono-exon	FALSE	NA	NA	NA	NA	NA	13895	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	51987438	51988387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_51987400_51988400
Isoform_8207_30	chr11	-	1718	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAATCCC	NA	False	NA	-30	True	NA	NA	NA	120534574	120530255	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
Isoform_82070_7	chr17	-	332	1	FSM	ENSMUSG00000118161.2	ENSMUST00000236305.2	882	1	592	-42	592	42	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	7871	False	NA	NA	False	AATAAA	-19	NA	31863161	31862829	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr17_-_31862800_31863200
Isoform_82071_5	chrX	+	1141	1	Genic_Genomic	ENSMUSG00000025626.17	novel	NA	NA	NA	NA	-9	-27219	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	52001133	52002274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_52001100_52002300
Isoform_82072_13	chrX	+	205	1	Intergenic	novelGene_2159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53255635	53255840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_53255600_53255800
Isoform_82073_9	chr12	+	176	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	11197950	11198126	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr12_+_11198000_11198100
Isoform_82078_3	chrX	-	2067	1	Genic_Genomic	ENSMUSG00000031139.17	novel	NA	NA	NA	NA	-116	-121180	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	59224565	59222498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_-_59222500_59224600
Isoform_82079_3	chrX	-	178	1	Intergenic	novelGene_2176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATTTTG	NA	False	NA	NA	False	NA	NA	NA	93330069	93329891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_93329900_93330100
Isoform_82080_8	chrX	+	1407	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	50	2	50	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTTGTCTTTTCAT	NA	False	NA	11	True	AATAAA	-24	NA	60753152	60754559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_60753200_60754600
Isoform_82082_13	chrX	-	323	1	FSM	ENSMUSG00000081752.4	ENSMUST00000121773.2	1101	1	-49	827	-49	-827	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAGAAGAAAAAATGAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	61820340	61820017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_61820000_61820300
Isoform_82084_16	chr19	-	2700	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAATTTGCCACAGT	NA	False	NA	NA	False	NA	NA	NA	22705267	22702520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr19_-_22704817_22704863
Isoform_82086_10	chrX	+	5112	2	Intergenic	novelGene_2165	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	63977044	63982203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_63977469_63977515
Isoform_82089_90	chrX	+	1106	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	12	3108	12	-3108	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	67864710	67865816	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_67864700_67865800
Isoform_82093_4896	chrX	-	831	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-41	-40	-41	40	mono-exon	FALSE	NA	NA	NA	NA	NA	4896	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	68649892	68649061	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_68649100_68649900
Isoform_82102_18	chr11	-	175	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGTAGACT	3343	False	NA	NA	False	NA	NA	NA	51946761	51946586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_51946600_51946800
Isoform_82103_3	chrX	-	187	1	ISM	ENSMUSG00000050424.10	ENSMUST00000114540.4	2287	2	2914	22	1914	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGAATGTTCTGGC	NA	False	NA	-22	True	AATACA	-15	NA	72077795	72077608	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_72077600_72077800
Isoform_82105_3	chrX	+	1737	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	-225	993	-225	-993	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGATTTCCTTTTCTTT	NA	False	NA	16	True	NA	NA	NA	72271671	72273408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72271700_72273400
Isoform_82106_27	chrX	+	1516	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	-4	993	-4	-993	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGATTTCCTTTTCTTT	NA	False	NA	16	True	NA	NA	NA	72271892	72273408	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_72271900_72273400
Isoform_82107_3	chrX	-	2345	1	FSM	ENSMUSG00000096966.3	ENSMUST00000180787.3	2298	1	1204	-1251	1204	1251	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTCACCACTTCCT	NA	False	NA	-1	True	AATAAA	-17	NA	72441138	72438793	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_72438800_72441100
Isoform_82109_5	chrX	-	795	1	Antisense	novelGene_ENSMUSG00000031383.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAGAAAGTAACAGT	NA	False	NA	NA	False	NA	NA	NA	72687113	72686318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_-_72686300_72687100
Isoform_82112_6	chrX	-	191	1	Intergenic	novelGene_2167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTAGGAACTTTGGG	NA	False	NA	NA	False	NA	NA	NA	72783324	72783133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_72783100_72783300
Isoform_82117_4	chrX	-	172	1	Intergenic	novelGene_2169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73047198	73047026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_73047000_73047200
Isoform_82118_4	chrX	-	177	1	Intergenic	novelGene_2170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	73054339	73054162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_73054200_73054300
Isoform_82119_4	chrX	+	323	1	Intergenic	novelGene_2136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8086931	8087254	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_8086900_8087300
Isoform_82120_3	chrX	-	1029	1	ISM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	8974	2	3390	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73058550	73057521	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chrX_-_73057500_73058600
Isoform_82121_3	chrX	-	297	1	Intergenic	novelGene_2137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTTTGTTTCCGA	NA	False	NA	NA	False	AATAAA	-6	NA	8092567	8092270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_8092300_8092600
Isoform_82123_29	chrX	+	2278	1	FSM	ENSMUSG00000119320.1	ENSMUST00000082806.3	137	1	-1626	-515	-1626	515	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314463	73316741	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_73314500_73316700
Isoform_82126_20	chrX	-	176	1	Intergenic	novelGene_2138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8104837	8104661	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_8104700_8104800
Isoform_82137_40	chrX	-	2163	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	30	8	30	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTCTCTTTGTTG	NA	False	NA	-7	True	AATAAA	-16	NA	5995443	5993280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_5993300_5995400
Isoform_82138_3	chrX	+	748	1	Intergenic	novelGene_2139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGAGACAGGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	8119026	8119774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_8119000_8119800
Isoform_82139_4	chrX	+	302	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-9	109	-9	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGACCTCCCGAA	NA	False	NA	NA	False	NA	NA	NA	78238643	78238945	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_78238600_78238900
Isoform_8214_20	chr11	-	2515	11	FSM	ENSMUSG00000042988.11	ENSMUST00000106177.8	2212	11	-307	4	-84	-4	multi-exon	FALSE	canonical	3	96	junction_10	9.96042167782067	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCCAGAAGCTCACCCT	9489	False	NA	NA	False	ATTAAA	-17	NA	120551739	120544617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
Isoform_82141_4	chrX	+	199	1	Intergenic	novelGene_2140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAAGGTAGGGTCTTCC	NA	False	NA	4	True	NA	NA	NA	8121509	8121708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_8121500_8121700
Isoform_82145_3	chrX	+	1502	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-49	-385	-49	385	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	79500298	79501800	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79500300_79501800
Isoform_82146_21	chrX	+	732	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	724	-388	724	388	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTAGTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	79501071	79501803	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79501100_79501800
Isoform_82147_8	chrX	+	1114	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	697	-743	697	743	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAATAA	NA	False	NA	NA	False	AAAAAG	-14	NA	79501044	79502158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79501000_79502200
Isoform_82149_45	chrX	+	1000	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	811	-743	811	743	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAATAA	NA	False	NA	NA	False	AAAAAG	-14	NA	79501158	79502158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_79501200_79502200
Isoform_82160_5	chrX	-	224	1	Intergenic	novelGene_2141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTTTGCCACAGGAC	NA	False	NA	NA	False	AAGAAA	-29	NA	8153465	8153241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_8153200_8153500
Isoform_82163_3	chr2	-	191	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAGAGGGAACGTGG	NA	False	NA	NA	False	NA	NA	NA	140050150	140049959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr2_-_140050000_140050200
Isoform_82164_3	chrX	-	181	1	Intergenic	novelGene_2172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCCTACCATAA	NA	False	NA	NA	False	NA	NA	NA	87966903	87966722	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_87966700_87966900
Isoform_82167_3	chrX	+	200	1	Intergenic	novelGene_2174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGAGCCGTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	90385409	90385609	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_90385400_90385600
Isoform_82169_5	chrX	+	2578	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	3	2	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCGTTGTCTCATAATC	NA	False	NA	NA	False	AATACA	-23	NA	8758623	8761201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_8758600_8761200
Isoform_82170_276	chrX	-	849	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	-15	16	-15	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGTATAAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8842813	8841964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8842000_8842800
Isoform_82171_67	chrX	-	882	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	-48	16	-48	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAGTATAAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8842846	8841964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8842000_8842800
Isoform_82172_4	chrX	+	1084	1	Antisense	novelGene_ENSMUSG00000079509.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-34	NA	93166295	93167379	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chrX_+_93166300_93167400
Isoform_82173_19	chrX	+	178	1	Intergenic	novelGene_2175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	93173102	93173280	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_93173100_93173300
Isoform_82174_30	chr11	-	222	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTAACTCTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	115400309	115400087	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_115400100_115400300
Isoform_82177_30	chrX	-	911	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	-63	8	-63	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGTATCAAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8853057	8852146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8852100_8853100
Isoform_82178_92	chrX	-	848	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGTATCAAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8852994	8852146	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_8852100_8853000
Isoform_82179_15	chrX	+	2476	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	8	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGAAATGTGTTTGAA	4264	False	NA	15	True	AATAAA	-21	NA	93679682	93682158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_93679700_93682200
Isoform_82181_7	chrX	-	2140	1	FSM	ENSMUSG00000082776.4	ENSMUST00000118127.2	1416	1	-65	-659	-65	659	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGCTGGTTTTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	93817705	93815565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_93815600_93817700
Isoform_82182_3	chrX	-	3466	1	FSM	ENSMUSG00000087522.4	ENSMUST00000142240.2	1245	1	-333	-1888	-333	1888	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCAGTGGTGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	94042622	94039156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_94039200_94042600
Isoform_82184_228	chr7	+	621	1	FSM	ENSMUSG00000066543.9	ENSMUST00000119541.2	555	1	-35	-31	-35	31	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	35817663	35818284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr7_+_35817700_35818300
Isoform_82185_3	chrX	-	1165	1	Intergenic	novelGene_2177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCACTGATCTCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	96377095	96375930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_96375900_96377100
Isoform_82186_4	chrX	-	3043	1	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-8	-32592	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96420786	96417743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_96417700_96420800
Isoform_82187_20	chrX	+	902	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	-63	8	-63	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGAAGTATCAAATTGA	NA	False	NA	22	True	AATAAA	-22	NA	8929190	8930092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_8929200_8930100
Isoform_82188_95	chrX	+	2342	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	-105	-1364	-105	1364	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTGGTTTGCATTTCT	NA	False	NA	3	True	AATAAA	-13	NA	99472513	99474855	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_99472500_99474900
Isoform_82190_3	chrX	+	839	1	FSM	ENSMUSG00000083123.2	ENSMUST00000122268.2	528	1	-152	-159	-152	159	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTGAAGTATAAAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	8946130	8946969	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_8946100_8947000
Isoform_82191_3	chrX	+	180	1	Intergenic	novelGene_2178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100176775	100176955	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_100176800_100177000
Isoform_82199_6	chrX	+	200	1	Intergenic	novelGene_2180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTACAGACTCAACTTTC	NA	False	NA	NA	False	NA	NA	NA	101174718	101174918	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_101174700_101174900
Isoform_82200_6	chrX	-	214	1	Intergenic	novelGene_2181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAGAAAAGAAG	9543	False	NA	NA	False	NA	NA	NA	101258680	101258466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_101258500_101258700
Isoform_82202_3	chrX	-	234	1	Intergenic	novelGene_2182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGATACCATTCATCAC	NA	False	NA	NA	False	NA	NA	NA	101277902	101277668	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_101277700_101277900
Isoform_82203_5	chrX	-	214	1	Intergenic	novelGene_2183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTTTCTTGTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	102261358	102261144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_102261100_102261400
Isoform_82204_3	chrX	+	336	1	Intergenic	novelGene_2184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAAAGTTGATTAA	NA	False	NA	NA	False	NA	NA	NA	102315392	102315728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_102315400_102315700
Isoform_82206_7	chrX	-	179	1	Intergenic	novelGene_2142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAAGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	10231992	10231813	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_10231800_10232000
Isoform_82207_17	chrX	-	846	1	NIC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	15	-2629	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAATTAAAAAA	2388	False	NA	NA	False	NA	NA	NA	103024875	103024029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chrX_-_103024000_103024900
Isoform_82208_6	chrX	-	175	1	Intergenic	novelGene_2185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATGTTCCCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	103155528	103155353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_-_103155400_103155500
Isoform_82209_7	chrX	+	2220	1	Genic_Genomic	ENSMUSG00000008035.13	novel	NA	NA	NA	NA	7	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGACAAGTGTGTGTT	1564	False	NA	NA	False	AATAAA	-19	NA	10583713	10585933	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chrX_+_10583700_10585900
Isoform_82211_414	chrX	-	3217	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-256	-555	-256	555	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGGAAAAAAAAAAATAA	NA	False	NA	NA	False	AATAAA	-11	NA	103392096	103388879	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103388900_103392100
Isoform_82225_3	chrX	+	178	1	Intergenic	novelGene_2186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTCATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	103467551	103467729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrX_+_103467600_103467700
Isoform_82226_5	chrX	-	2311	1	FSM	ENSMUSG00000031224.7	ENSMUST00000033575.7	2316	1	7	-2	7	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTTATGTGATCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103900866	103898555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_-_103898600_103900900
Isoform_82227_26	chrX	+	3516	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	12	22	12	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAATAATGCTAATCCA	NA	False	NA	NA	False	AATAAA	-10	NA	104163995	104167511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chrX_+_104164000_104167500
Isoform_82229_5	chrY	+	2583	2	Intergenic	novelGene_2226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGTTAGAAAATTTTG	6	False	NA	NA	False	NA	NA	NA	3934679	3937303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrY_+_3934690_3934730
Isoform_82232_7	chrY	+	200	1	Intergenic	novelGene_2227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTTGGTCCGTA	NA	False	NA	NA	False	NA	NA	NA	41547624	41547824	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrY_+_41547600_41547800
Isoform_82234_3	chr13	-	571	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGGTTTATTAAAA	7902	False	NA	NA	False	NA	NA	NA	23361284	23360713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr13_-_23360700_23361300
Isoform_82235_4	chrY	+	659	1	Intergenic	novelGene_2229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	60519243	60519902	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrY_+_60519200_60519900
Isoform_82236_3	chrY	+	536	1	Intergenic	novelGene_2228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTTGGCTACATTCTT	NA	False	NA	NA	False	NA	NA	NA	47725084	47725620	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrY_+_47725100_47725600
Isoform_82239_3	chrY	-	866	1	Intergenic	novelGene_2230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAGGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	74744115	74743249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chrY_-_74743200_74744100
Isoform_8226_4	chr11	-	1941	10	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	82	3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	32.0685993103596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTCACCCTGAACCTT	9878	False	NA	NA	False	ATTAAA	-24	NA	120551350	120544610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
Isoform_8227_10	chr11	-	2490	3	ISM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	intron_retention	FALSE	canonical	3	880	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120602133_120602215_120602305_120602528
Isoform_8228_6	chr11	-	889	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	-16	0	-10	0	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604574	120601767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
Isoform_8229_170	chr11	-	606	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
Isoform_823_307	chr10	-	3219	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	61	2	61	-2	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTTTTGCTTCTGA	NA	False	NA	-27	True	AATAAA	-15	NA	41179195	41064169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
Isoform_8230_33	chr11	-	554	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
Isoform_8231_4	chr11	-	627	5	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	330.906614470004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604563	120601768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120602133_120602215_120602328_120602528_120602583_120602669_120602722_120604518
Isoform_8232_4	chr11	-	516	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	302.505463678849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120602133_120602528_120602583_120602669_120602722_120604518
Isoform_8233_4	chr11	-	688	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	556	junction_3	132.30268326833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120602305_120602528_120602583_120602669_120602722_120604518
Isoform_8234_48	chr11	-	874	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	14	4	14	-4	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCACAGATCTGTGCTA	9998	False	NA	-8	True	AATAAA	-33	NA	120618093	120616228	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
Isoform_8235_6	chr11	-	888	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	-56	-2	-18	2	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATCTGTGCTATCTGTG	9966	False	NA	-2	True	AATAAA	-39	NA	120618125	120616222	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
Isoform_8236_14	chr11	-	2137	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-16	-3	-16	1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120675049	120671570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8237_3	chr11	-	2287	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-167	-2	-167	0	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675200	120671571	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8238_3	chr11	-	2504	6	FSM	ENSMUSG00000025158.8	ENSMUST00000123273.2	2467	6	-38	1	-16	-1	multi-exon	FALSE	canonical	3	152	junction_3	12.2081939696255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8240_6	chr11	-	2082	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	27	junction_12	280.186856501537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120686764
Isoform_8241_12	chr11	-	1802	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	1	27	junction_12	269.691737241048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAGATCTCTAGTGAT	NA	False	NA	-15	True	AATAAA	-18	NA	120687221	120680025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120687044
Isoform_8242_7	chr11	-	2339	13	ISM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	6	-17	0	16	intron_retention	FALSE	canonical	1	287	junction_5	171.834384089901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTATGGCTGTTGC	NA	False	NA	0	True	AATAAA	-33	NA	120687215	120680010	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302
Isoform_8243_304	chr11	-	2105	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	197.871304777721	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687214	120680028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
Isoform_8244_21	chr11	-	1908	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	0	1	0	-1	multi-exon	FALSE	canonical	1	70	junction_13	260.320262471546	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687221	120680028	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
Isoform_8245_174	chr11	-	1834	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687221	120680026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
Isoform_8249_5	chr11	-	2460	10	ISM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	13388	-27	-1006	27	3prime_fragment	TRUE	canonical	3	601	junction_8	41.2579958580421	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	9605	False	NA	-13	True	ATTAAA	-13	NA	120701533	120697903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466
Isoform_825_99	chr10	-	3180	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	7	95	7	-95	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAATTCATCCAAATC	NA	False	NA	-120	True	AGTAAA	-8	NA	41179249	41064262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
Isoform_8252_5	chr11	-	3191	14	ISM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	12161	-27	-2233	27	3prime_fragment	FALSE	canonical	3	550	junction_10	50.5300894599287	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	8378	False	NA	-13	True	ATTAAA	-13	NA	120702760	120697903	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663
Isoform_8254_7	chr11	-	3425	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	-23	1	-23	-1	multi-exon	FALSE	canonical	2	6	junction_6	6.51399253648882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCTGTCTTGTCCTAC	1448	False	NA	1	True	ATTAAA	-27	NA	120823721	120717355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_8255_12	chr11	-	526	2	NNC	ENSMUSG00000048445.7	novel	1164	6	NA	NA	20974	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGAAGTTGTCT	4478	False	NA	-11	True	ATTAAA	-15	NA	120743523	120717367	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_120717751_120743380
Isoform_8256_4	chr11	-	3366	14	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	37	51259	37	-3996	5prime_fragment	FALSE	canonical	2	6	junction_1	7.23894791139606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTTAAAAATTTCCTT	1508	False	NA	NA	False	AGTAAA	-3	NA	120823661	120768613	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_8257_14	chr11	-	1404	7	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	2	75157	2	-27894	5prime_fragment	FALSE	canonical	3	22	junction_2	1.37436854187255	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTACTTGTGATAAGT	1473	False	NA	NA	False	NA	NA	NA	120823696	120792511	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_-_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
Isoform_8259_21	chr11	-	2343	9	FSM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	6	-526	6	526	multi-exon	FALSE	canonical	3	23	junction_1	191.835052844885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGGTTTCTAGGTCC	782	False	NA	NA	False	ATTAAA	-16	NA	120882150	120849289	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_8261_141	chr11	-	2053	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-232	1679	6	220	multi-exon	FALSE	canonical	3	176	junction_1	174.428237039028	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTCTTTTTATT	782	False	NA	11	True	NA	NA	NA	120882150	120854253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_8262_90	chr11	-	3732	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-232	0	6	0	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_8268_255	chr11	-	3668	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	6	1	6	-1	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	782	False	NA	-12	True	AATAAA	-21	NA	120882150	120852575	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_8269_261	chr11	-	1990	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	6	1679	6	220	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTCTTTTTATT	782	False	NA	11	True	NA	NA	NA	120882150	120854253	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
Isoform_827_3	chr10	-	2049	9	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	6	junction_4	58.8318578662955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCTCTACCTTGTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	41366359	41363169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364424_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459
Isoform_8275_6	chr11	-	1008	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	-32	6	-32	-6	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCACTTGTTTTTGT	7864	False	NA	NA	False	AATAAA	-16	NA	120930276	120927578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
Isoform_8276_25	chr11	-	1682	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	363	1	363	-1	multi-exon	FALSE	canonical	3	61	junction_1	13.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTGCAGTCTCCTCA	NA	False	NA	-1	True	AATAAA	-18	NA	121009140	121007041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121008523_121008652_121008727_121009013
Isoform_8278_90	chr11	-	1304	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	3	1	3	-1	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGATCTGGGCGCTG	NA	False	NA	-8	True	AGTAAA	-40	NA	121095534	121068417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
Isoform_828_204	chr10	-	1610	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-12	4	-12	2	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGCTCTACCTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	41366348	41363171	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
Isoform_8280_67	chr11	-	2359	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	56	2	-18	-2	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCCTTTCTGTTTTCT	NA	False	NA	-2	True	AATAAA	-20	NA	121120079	121113415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
Isoform_8281_26	chr11	-	2358	7	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	33	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	17.7709188157381	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCCTTTCTGTTTTCT	NA	False	NA	-2	True	AATAAA	-20	NA	121120098	121113415	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119884
Isoform_8283_10	chr11	-	2233	7	FSM	ENSMUSG00000039294.15	ENSMUST00000106115.8	2239	7	3	3	3	-3	multi-exon	FALSE	canonical	2	10	junction_6	22.8284666346404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCCTTTCTGTTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	121120128	121113416	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121120038
Isoform_8285_133	chr11	-	2286	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	31	4	-13	-4	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGCAGAGCCATATGT	NA	False	NA	-3	True	AATAAA	-29	NA	121245240	121218053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
Isoform_8286_505	chr11	-	2253	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	63	5	11	-5	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGAGCAGAGCCATATG	NA	False	NA	-4	True	AATAAA	-28	NA	121245208	121218054	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
Isoform_829_3	chr10	-	2335	6	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	150	junction_5	19.2291445467551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCTCTACCTTGTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	41366373	41363169	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41365348_41365459_41365557_41365978
Isoform_8290_22	chr11	-	2843	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	10	11	10	-11	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCACAATCTTGACTA	NA	False	NA	-9	True	AATAAA	-15	NA	121563969	121507033	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
Isoform_8291_40	chr11	-	2277	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	15	572	15	-572	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTTCTAACAATGTAAA	NA	False	NA	-9	True	AATAAA	-18	NA	121563964	121507594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
Isoform_8292_14	chr11	-	3598	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	46.9704398768228	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397056	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
Isoform_8294_52	chr11	-	3647	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397058	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_8295_7	chr11	-	3343	10	NNC	ENSMUSG00000020472.15	novel	3771	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	48.4877482297854	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTTCTTCTATCCTT	NA	False	NA	-3	True	AATAAA	-23	NA	59397047	59376347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
Isoform_8297_25	chr11	-	814	2	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGGCCATGGTGGCA	4759	False	NA	-27	True	AATAAA	-15	NA	83458250	83454497	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_83455094_83458032
Isoform_8299_15	chr11	-	892	3	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCATGGTGGCATTTTGT	4754	False	NA	-21	True	AATAAA	-21	NA	83458255	83454491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_83455094_83457579_83457647_83458032
Isoform_830_3	chr10	-	2377	5	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	150	junction_4	21.1187120819429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTAGTGGCTCTACCT	NA	False	NA	-8	True	AATAAA	-12	NA	41366342	41363175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41363579_41363667_41363822_41363988_41365348_41365459_41365557_41365978
Isoform_8300_3	chr11	-	2902	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	34	82	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	70.8071629214704	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174124	52143115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_8301_6	chr11	-	3091	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	10	81	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	90.6081382147531	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCTGACTGAGTAGCT	NA	False	NA	-8	True	AATAAA	-22	NA	52174148	52143116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_8302_22	chr11	-	2990	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	19	82	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174139	52143115	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_8303_4	chr11	-	3056	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-59	70	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTTTTCAAAGTCTG	NA	False	NA	-19	True	AATAAA	-11	NA	52174217	52143127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
Isoform_8304_6	chr11	-	2184	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-198	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9868405862266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675231	120671572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8305_21	chr11	-	2004	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.9868405862266	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120675049	120671570	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8306_10	chr11	-	2371	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_1	65.2090654910973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
Isoform_8307_8	chr11	-	435	3	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGGTGTCTGATTTAT	NA	False	NA	NA	False	NA	NA	NA	121816155	121798628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121798837_121799014_121799142_121816055
Isoform_8308_13	chr11	-	2750	4	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	0	True	NA	NA	NA	121816143	121795182	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
Isoform_8309_4	chr11	-	2392	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-4	1878	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	73.5129920490249	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGTGGTCATAAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	4391086	4372189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
Isoform_831_3	chr10	-	755	4	NNC	ENSMUSG00000075225.16	novel	2742	18	NA	NA	7891	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTTCAAAGCTCCT	NA	False	NA	NA	False	AATAAA	-10	NA	41420954	41414844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_41415301_41415416_41415539_41417769_41417898_41420905
Isoform_8310_3	chr11	-	2342	7	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-70	1879	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	79.0690626393577	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGGTCATAAAAAT	NA	False	NA	-1	True	AATAAA	-14	NA	4391175	4372188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
Isoform_8311_5	chr11	-	2476	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	1207	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	86435596	86391651	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
Isoform_8313_5	chr11	-	634	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87344417	87343566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_87343868_87344084
Isoform_8314_5	chr11	-	2485	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3209	1842	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTGTTTCTCTG	2134	False	NA	NA	False	AATAAA	-22	NA	94651798	94645959	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
Isoform_8315_7	chr11	-	359	2	Antisense	novelGene_ENSMUSG00000048070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATAAATGGGCATTA	NA	False	NA	NA	False	AATATA	-1	NA	66804944	66789247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Antisense_chr11_-_66789509_66804846
Isoform_8316_6	chr11	-	642	7	NNC	ENSMUSG00000034621.15	novel	390	6	NA	NA	18	10100	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	58.3628496753048	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATAGGCACTCTGAT	678	False	NA	NA	False	AATAAA	-34	NA	102446984	102388219	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_102388336_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
Isoform_8317_4	chr11	-	1293	6	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-72	-3641	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	23.2430634813916	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTTTGGTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	5211630	5158473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_5159037_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
Isoform_8318_6	chr11	-	758	4	NNC	ENSMUSG00000083227.2	novel	354	3	NA	NA	-4274	-179	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTGGTTGTTTTGAAA	NA	False	NA	-1	True	AATAAA	-17	NA	94692877	94688053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_94688355_94688551_94688636_94689121_94689145_94692527
Isoform_8319_3	chr11	-	620	3	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-26	-24056	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAAGTGTTCA	2717	False	NA	NA	False	NA	NA	NA	82762062	82727550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_82727798_82736577_82736722_82761833
Isoform_832_4	chr10	-	2154	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	367	False	NA	1	True	AATAAA	-22	NA	41685626	41594839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
Isoform_8322_3	chr11	-	2016	11	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	319.549698795039	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGATCTGGTGGGGTT	NA	False	NA	NA	False	ATTAAA	-41	NA	74615176	74564780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_74565108_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
Isoform_8323_3	chr11	-	2361	2	Genic_Genomic	ENSMUSG00000082454.4	novel	1848	1	NA	NA	-4556	273	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCCCTGTGTCTGTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	48649097	48642420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Genic_Genomic_chr11_-_48644674_48648989
Isoform_8324_3	chr19	+	182	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	3882528	3882710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr19_+_3882500_3882700
Isoform_8325_3	chr11	-	1975	17	NNC	ENSMUSG00000020546.15	novel	1782	16	NA	NA	-5	-8514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.33014170118931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAATGGCCTCCTTTTGC	NA	False	NA	NA	False	AATAAA	-42	NA	90528915	90391448	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_90391715_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
Isoform_8326_3	chr11	-	569	3	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGGGAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-12	NA	60997050	60982749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	Intergenic_chr11_-_60983104_60989850_60989955_60996939
Isoform_8327_3	chr11	-	1894	13	NNC	ENSMUSG00000039703.16	novel	842	8	NA	NA	21	6647	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	124.923393192255	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGATTTACTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	120328513	120288443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_120288883_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
Isoform_8328_3	chr11	-	440	3	NNC	ENSMUSG00000020617.14	novel	2035	6	NA	NA	-37	-13694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACGTGTCTTACACGGT	NA	False	NA	NA	False	AATAAA	-11	NA	109704937	109696117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_-_109696270_109704384_109704573_109704837
Isoform_8329_8	chr11	+	3571	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	37	6	11	1	multi-exon	TRUE	canonical	3	81	junction_10	64.4808326386825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATATGGCTGGTACTGTG	3881	False	NA	8	True	ATTAAA	-24	NA	3152699	3194582	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_833_4	chr10	-	2346	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5623	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_8	73.1956282847548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	5889	False	NA	1	True	AATAAA	-22	NA	41628257	41594839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41628007
Isoform_8330_17	chr11	+	3490	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3896	False	NA	14	True	ATTAAA	-30	NA	3152714	3194588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_8331_6	chr11	+	3511	18	NIC	ENSMUSG00000020454.18	novel	2952	16	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	4069	False	NA	13	True	ATTAAA	-29	NA	3152887	3194587	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
Isoform_8332_126	chr11	+	2646	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	284	0	-162	0	multi-exon	FALSE	canonical	3	69	junction_2	176	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	6290	False	NA	NA	False	GATAAA	-17	NA	3240276	3245429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3241885_3243279_3243344_3244455
Isoform_8333_11	chr11	+	3255	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	-325	0	-325	0	multi-exon	FALSE	canonical	3	69	junction_2	176	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	5681	False	NA	NA	False	GATAAA	-17	NA	3239667	3245429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3241885_3243279_3243344_3244455
Isoform_834_5	chr10	-	2267	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	-17	5	0	0	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	367	False	NA	-1	True	AATAAA	-20	NA	41685626	41594841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
Isoform_8340_60	chr11	+	3293	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-120	0	-102	0	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6350	False	NA	14	True	ATTAAA	-16	NA	3240336	3259083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
Isoform_835_73	chr10	-	2202	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-23	-2	0	2	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	367	False	NA	1	True	AATAAA	-22	NA	41685626	41594839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
Isoform_8351_118	chr11	+	3284	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-166	0	-166	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6286	False	NA	14	True	ATTAAA	-16	NA	3240272	3259083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_8359_11	chr11	+	3918	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-800	0	-354	0	multi-exon	TRUE	canonical	3	276	junction_3	67.6576348652209	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5652	False	NA	14	True	ATTAAA	-16	NA	3239638	3259083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
Isoform_836_7	chr10	-	2337	12	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	60.5360353033458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	108	False	NA	1	True	AATAAA	-22	NA	41685885	41594839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
Isoform_8367_102	chr11	+	689	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	18	0	18	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464884	3467351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
Isoform_8368_3	chr11	+	674	4	NIC	ENSMUSG00000075702.11	novel	707	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	68.794379615392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464864	3467351	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_3465074_3466260_3466297_3466841_3466921_3467001
Isoform_837_12	chr10	-	2242	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	60.7736785129878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	110	False	NA	-1	True	AATAAA	-20	NA	41685883	41594841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
Isoform_8371_894	chr11	+	2124	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	3	784	3	-784	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTCTGTGTTCAGAA	NA	False	NA	24	True	NA	NA	NA	3913977	3929220	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
Isoform_8379_10	chr11	+	2936	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	4	16	4	-16	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3981786	3998008	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
Isoform_838_10	chr10	-	2362	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5592	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	5920	False	NA	0	True	AATAAA	-21	NA	41628226	41594840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
Isoform_8380_44	chr11	+	1903	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	-26	-3	-26	3	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTTAAGACATAAATC	7824	False	NA	NA	False	AATAAA	-22	NA	4085175	4091175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
Isoform_8382_5	chr11	+	1973	8	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-20	3	intron_retention	FALSE	canonical	3	22	junction_1	6.01698276818648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTTAAGACATAAATC	7830	False	NA	NA	False	AATAAA	-22	NA	4085181	4091175	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4090079_4090297_4090401_4090486
Isoform_8383_402	chr11	+	2975	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	28	1917	23	1205	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATGGAAGCAGTTTGT	NA	False	NA	4	True	ATTAAA	-19	NA	4110377	4130624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_8384_480	chr11	+	2902	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	2013	0	1109	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110354	4130528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_8386_10	chr11	+	4894	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	21	0	-21	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAATTACTTTGGTCAT	NA	False	NA	25	True	ATTAAA	-29	NA	4110354	4132520	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
Isoform_8388_286	chr11	+	1918	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	4	-1	4	1	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTGTGTATAGTTAGG	1586	False	NA	22	True	AATAAA	-13	NA	4136825	4165503	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
Isoform_8389_12	chr11	+	2458	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	291	junction_7	26.8639808924097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1585	False	NA	24	True	AATAAA	-15	NA	4136824	4165505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
Isoform_839_3	chr10	-	2327	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	76.3137282798249	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	352	False	NA	0	True	AATAAA	-21	NA	41685641	41594840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41631694_41631806_41685568
Isoform_8390_112	chr11	+	1569	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	5	0	5	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7123	False	NA	17	True	AATAAA	-25	NA	4168229	4172409	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
Isoform_8392_77	chr11	+	2288	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-17	1	-17	-1	multi-exon	FALSE	canonical	3	46	junction_2	1.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGTCAGTCTTTTA	8276	False	NA	4	True	TTTAAA	-17	NA	4186402	4191025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4186914_4188405_4188543_4189385
Isoform_8393_9	chr11	+	2573	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-304	3	-304	-3	multi-exon	TRUE	canonical	3	46	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGGTGTCAGTCTTT	7989	False	NA	2	True	TTTAAA	-15	NA	4186115	4191023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4186914_4188405_4188543_4189385
Isoform_8396_8	chr11	+	2152	2	FSM	ENSMUSG00000058755.4	ENSMUST00000131764.2	773	2	-20	-1359	-20	-3	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGGTGTCAGTCTTT	8273	False	NA	2	True	TTTAAA	-15	NA	4186399	4191023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4186914_4189385
Isoform_8397_5	chr11	+	3827	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	-29	0	-29	0	multi-exon	FALSE	canonical	3	7	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGCATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4217065	4222514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4217120_4218183_4218366_4218923
Isoform_8399_38	chr11	+	2686	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-40	4	-40	-4	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTCTGTGACATGCT	NA	False	NA	4	True	AATAAA	-16	NA	4587706	4633381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_84_929	ERCC-00108	+	1003	1	FSM	ERCC-00108A	DQ668365	1005	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	929	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1005	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00108_+_0_1000
Isoform_840_3	chr10	-	2177	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	85.3035169263261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGCCTGTGGAAATAT	369	False	NA	-2	True	AATAAA	-19	NA	41685624	41594842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
Isoform_8400_275	chr11	+	2646	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	3	1	3	-1	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGTGACATGCTCCA	NA	False	NA	7	True	AATAAA	-19	NA	4587749	4633384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_8401_19	chr11	+	4958	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	3	-2311	3	-3	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCAGAGTCTCCTGTG	NA	False	NA	11	True	AATAAA	-20	NA	4587749	4635696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_8404_5	chr11	+	751	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	3	-31957	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTTATGAATTATTTA	NA	False	NA	NA	False	AATAAA	-32	NA	4587749	4601428	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
Isoform_8405_5	chr11	+	2591	19	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-40	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	62.2245039264186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGTGACATGCTCCA	NA	False	NA	7	True	AATAAA	-19	NA	4587706	4633384	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
Isoform_8409_55	chr11	+	787	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	5	0	5	0	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654682	4687669	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
Isoform_841_17	chr10	-	2113	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	238	5	0	0	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	367	False	NA	-1	True	AATAAA	-20	NA	41685626	41594841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
Isoform_8416_679	chr11	+	1880	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	47	-1	-1	1	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	12	True	ATTAAA	-12	NA	4823997	4844201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
Isoform_842_5	chr10	-	2182	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-41	2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_9	73.7545144046229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTGGAAATATTCT	85	False	NA	1	True	AATAAA	-22	NA	41685908	41594839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
Isoform_8424_363	chr11	+	2234	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-3	4	-3	-4	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGACTCTGTTTGTAGCT	NA	False	NA	17	True	ATTAAA	-14	NA	4845339	4878861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
Isoform_8427_406	chr11	+	3786	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	86	213	-2	-151	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCACATTTCTTCCCT	NA	False	NA	19	True	AATAAA	-19	NA	4936909	4992578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
Isoform_8428_5	chr11	+	3897	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	62	126	-26	-64	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATATTGTATATTTAC	NA	False	NA	106	True	NA	NA	NA	4936885	4992665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
Isoform_8429_11	chr11	+	3928	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	92	65	4	-3	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTTCCTGGCCAGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	4936915	4992726	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
Isoform_843_5	chr10	-	2313	10	NNC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-5628	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	71.4082334361321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGTGGAAATATTCTG	5884	False	NA	2	True	AATAAA	-23	NA	41628262	41594838	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
Isoform_8434_10	chr11	+	1790	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	72.0831767821036	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049380	5056092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_8435_10	chr11	+	1887	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-48	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	65.8649185834159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049384	5056092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_8437_5	chr11	+	1954	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	461	0	-46	0	intron_retention	FALSE	canonical	3	72	junction_2	52.4917875014944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049386	5056091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
Isoform_8439_63	chr11	+	1880	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	454	-1	-53	1	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049379	5056092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_8440_3	chr11	+	2345	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	22	0	intron_retention	FALSE	canonical	3	31	junction_5	75.4940192252043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	9940	False	NA	16	True	AATAAA	-17	NA	5049098	5056091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055348_5055432_5055718_5055799
Isoform_8441_3	chr11	+	2211	6	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-36	1	intron_retention	FALSE	canonical	3	72	junction_1	59.392255387382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTCCTGAGTGTCA	NA	False	NA	17	True	AATAAA	-18	NA	5049396	5056092	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
Isoform_8444_5	chr11	+	2575	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-61	0	intron_retention	FALSE	canonical	3	72	junction_1	52.1641835056998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	9706	False	NA	16	True	AATAAA	-17	NA	5048864	5056091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
Isoform_8445_6	chr11	+	2895	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	-44	-1864	-34	-3	multi-exon	FALSE	canonical	3	908	junction_2	32	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCCTGTTCTGTGATTT	NA	False	NA	31	True	ATTAAA	-14	NA	5470960	5475890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5471201_5471922_5472020_5473332
Isoform_8446_52	chr11	+	1838	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	289	2	-47	-2	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	32	True	ATTAAA	-15	NA	5470947	5475891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
Isoform_8447_507	chr11	+	1806	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	321	2	-15	-2	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	32	True	ATTAAA	-15	NA	5470979	5475891	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
Isoform_8449_13	chr11	+	2599	4	NIC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	876	junction_3	39.9110121255887	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGTTCTGTGATTTCT	NA	False	NA	33	True	ATTAAA	-16	NA	5470958	5475892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5471201_5471922_5472020_5473332_5474385_5474684
Isoform_8450_12	chr11	+	859	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-23	4087	-2	-1253	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712126	5730623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
Isoform_8451_5	chr11	+	954	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-22	3991	-1	-1157	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATTGGTGGACGGCATT	NA	False	NA	105	True	AAAACA	-12	NA	5712127	5730719	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
Isoform_8452_3	chr11	+	1666	6	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	34.213447648549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTAAGTTTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	5712153	5734713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205_5730636_5733891
Isoform_8454_18	chr11	+	639	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	9	1198	9	-1198	multi-exon	FALSE	canonical	3	68	junction_2	16.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAAGACATTTTCCTT	NA	False	NA	64	True	AATACA	-16	NA	5712137	5730678	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5712241_5715508_5715572_5730205
Isoform_8455_3	chr11	+	1844	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	0	2	0	-2	multi-exon	FALSE	canonical	3	68	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5712128	5731874	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5712241_5715508_5715572_5730205
Isoform_8456_4	chr11	+	1095	4	NIC	ENSMUSG00000083844.9	novel	441	7	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	36.7362975210561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTAAGTTTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	5712136	5734713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5712241_5715508_5715572_5730205_5730312_5733891
Isoform_8457_3	chr11	+	1573	5	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	42.8740889116025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATTGACATTTAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	5712150	5734708	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5732184_5732358_5733891
Isoform_8458_7	chr11	+	1426	4	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	40.7130882586369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGACATTTAAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	5712126	5734710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5733891
Isoform_8459_4	chr11	+	538	2	ISM	ENSMUSG00000083844.9	ENSMUST00000131130.8	595	3	-29	1617	-8	-1253	5prime_fragment	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712120	5730623	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_5712241_5730205
Isoform_8460_5	chr11	+	1529	2	ISM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-18	7107	16	-7107	5prime_fragment	FALSE	canonical	3	413	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCATTAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	5738503	5743181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_5738643_5741791
Isoform_8461_7	chr11	+	2339	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	-26	-18	16	18	multi-exon	FALSE	canonical	3	125	junction_7	84.6740072277201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTCGTGCATTTCAG	NA	False	NA	16	True	TATAAA	-17	NA	5738503	5750980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_8467_15	chr11	+	2334	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	16	-349	16	16	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCATTCGTGCATTTC	NA	False	NA	14	True	TATAAA	-15	NA	5738503	5750978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
Isoform_8469_6	chr11	+	3897	21	FSM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	-64	-2	-64	2	multi-exon	FALSE	canonical	3	11	junction_16	4.12886182863995	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTGTTCTGACTGGCT	8608	False	NA	10	True	AATAAA	-20	NA	5811882	5822090	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
Isoform_8470_231	chr11	+	2454	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	86	1	86	-1	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTCTTGTGTTTACTT	NA	False	NA	18	True	GATAAA	-19	NA	5905778	5917779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
Isoform_8472_10	chr11	+	2918	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	-8	-2131	0	2131	multi-exon	FALSE	canonical	3	605	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6241632	6249808	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6241694_6246951
Isoform_8474_43	chr11	+	4133	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241614	6306642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_8477_317	chr11	+	4130	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-3	0	-3	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241629	6306642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_848_7	chr10	-	3614	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	-3	3237	0	708	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCATTTTTGTTGTTGT	NA	False	NA	NA	False	TTTAAA	-36	NA	42152751	42061073	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
Isoform_8483_13	chr11	+	4385	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241972	6306642	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
Isoform_849_8	chr10	-	3567	5	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	1	742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.3386372666816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTATGGTGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	42152691	42061039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42061079_42061099_42062292_42072461_42073898_42150811_42151542_42152521
Isoform_8494_5	chr11	+	4025	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	4	87	4	-3	multi-exon	TRUE	canonical	3	65	junction_1	72.0482679083075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGCTGAGTCCTTCCT	4627	False	NA	17	True	ATTAAA	-17	NA	6339077	6356071	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_8495_3	chr11	+	4098	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	18	0	18	0	multi-exon	FALSE	canonical	3	65	junction_1	72.0482679083075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4641	False	NA	15	True	AATAAA	-18	NA	6339091	6356158	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
Isoform_8497_14427	chr9	+	725	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-43	-192	-43	192	mono-exon	FALSE	NA	NA	NA	NA	NA	14427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAATAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96777667	96778392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr9_+_96777700_96778400
Isoform_8498_181	chr11	+	754	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	396	20	-29	-7	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365838	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_8499_13	chr11	+	830	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	320	20	-105	-7	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365762	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_8501_4	chr11	+	1191	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	-28	7	-28	-2	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCCTTGTTTGT	NA	False	NA	-5	True	AATAAA	-12	NA	6365414	6369810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_8502_9	chr11	+	572	4	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_3	17797.2392116181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369477
Isoform_8503_10	chr11	+	819	4	FSM	ENSMUSG00000071866.13	ENSMUST00000137829.8	677	4	-8	-134	0	-7	multi-exon	FALSE	canonical	3	36680	junction_3	786.740674484858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365867	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6365980_6368100_6368315_6369112_6369286_6369477
Isoform_8504_81	chr11	+	730	5	FSM	ENSMUSG00000071866.13	ENSMUST00000090749.13	746	5	-2	18	0	-7	multi-exon	FALSE	canonical	3	147	junction_1	16065.018555467	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365867	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6365985_6368100_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_8505_8	chr11	+	2846	4	FSM	ENSMUSG00000071866.13	ENSMUST00000155824.2	2853	4	-8	15	0	-7	multi-exon	FALSE	canonical	3	36680	junction_3	513.872444181325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365867	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6368132_6368225_6368315_6369112_6369286_6369477
Isoform_8506_17	chr11	+	2940	3	NIC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	0	-7	intron_retention	FALSE	canonical	3	36680	junction_2	619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAAGAACTGTT	NA	False	NA	-18	True	NA	NA	NA	6365867	6369797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6368315_6369112_6369286_6369477
Isoform_851_7	chr10	-	6785	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	57	6	1	-6	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCATGCCCAGGAGTCT	NA	False	NA	-8	True	AATAAA	-16	NA	42152691	42057842	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
Isoform_8510_261	chr11	+	1862	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	-5	1	-5	1	multi-exon	FALSE	canonical	3	315	junction_9	41.5204843093617	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAGTTGTCAAGCATT	NA	False	NA	14	True	AAAACA	-26	NA	6496881	6546743	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_8511_3	chr11	+	1720	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-5	4	combination_of_known_junctions	TRUE	canonical	2	2	junction_4	144.667506717991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATCTCCAGTTGTCAA	NA	False	NA	9	True	AAAACA	-21	NA	6496881	6546738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_8512_9	chr11	+	1665	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	133.856266196245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTCAAGCATTTTTTT	NA	False	NA	19	True	AAAACA	-31	NA	6496909	6546748	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
Isoform_8513_67	chr11	+	1256	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	-101	2	-97	1	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068005	9086168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
Isoform_8521_2200	chr11	+	1214	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	39	-1	-2	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	2200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068545	9086168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
Isoform_8529_37	chr11	+	1232	9	NIC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	905.183821110386	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068736	9086170	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
Isoform_854_8	chr10	-	2530	3	FSM	ENSMUSG00000048756.12	ENSMUST00000175881.8	2535	3	1	4	1	-4	multi-exon	FALSE	canonical	3	109	junction_2	12.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCACTCTTTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	42152691	42072267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42073898_42150811_42151542_42152521
Isoform_8540_3	chr11	+	2644	16	FSM	ENSMUSG00000020122.17	ENSMUST00000102884.10	2943	16	7	292	-1	-292	multi-exon	FALSE	canonical	0	0	junction_1	1.92757763930679	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTGATAAATTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	16702209	16837631	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_16702571_16808895_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140
Isoform_8541_5	chr11	+	921	5	ISM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	52	5291	52	-25	5prime_fragment	FALSE	canonical	3	586	junction_1	55.71523579776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17109314	17145084	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668
Isoform_8542_243	chr11	+	2813	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	52	-6	52	6	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGTGTCAGCTTTGA	NA	False	NA	17	True	AATAAA	-21	NA	17109314	17150381	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
Isoform_8545_145	chr11	+	2000	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	1	1	1	-1	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTGGAGGCGTTG	2472	False	NA	7	True	AATAAA	-9	NA	17161918	17183795	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
Isoform_8546_67	chr11	+	2024	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-21	-1	-21	1	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGAGGCGTTGAT	2450	False	NA	9	True	AATAAA	-11	NA	17161896	17183797	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
Isoform_8549_14	chr11	+	2023	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-21	979	-6	-979	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAGTTTGAAATAATT	7310	False	NA	NA	False	AATAAA	-25	NA	17207572	17218197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_855_38	chr10	-	2363	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	150	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354411	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_8550_211	chr11	+	1051	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-17	1947	-2	605	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACGGTTGTATGTCC	7314	False	NA	21	True	AATAAA	-22	NA	17207576	17217229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_8552_3	chr11	+	1340	5	FSM	ENSMUSG00000000581.9	ENSMUST00000156784.2	684	5	-51	-605	43	605	multi-exon	TRUE	canonical	2	9	junction_1	280.161895160637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACGGTTGTATGTCC	7374	False	NA	21	True	AATAAA	-22	NA	17207636	17217229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17208008_17212647_17212795_17213608_17213676_17213950_17214007_17216530
Isoform_8553_3	chr11	+	839	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-556	105	-522	-105	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGTTTTTAAAGA	NA	False	NA	NA	False	AATAAA	-3	NA	17903447	17904993	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_17904086_17904792
Isoform_8555_20	chr11	+	2875	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-22	-1	-22	1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAACA	-13	NA	19874419	19972578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8556_5	chr11	+	3214	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-361	-1	-294	1	multi-exon	TRUE	canonical	3	51	junction_2	8.95767827062348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAACA	-13	NA	19874080	19972578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8557_10	chr11	+	4309	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-8	-1449	-8	0	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGCTTTGGGGTATTT	NA	False	NA	3	True	TATAAA	-15	NA	19874433	19974026	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8558_5	chr11	+	4660	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-360	-1448	-293	-1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19874081	19974025	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8559_8	chr11	+	3045	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-192	-1	-125	1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAACA	-13	NA	19874249	19972578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_856_13	chr10	-	2446	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	67	0	67	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354494	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_8560_5	chr11	+	3120	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-267	-1	-200	1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAAAACCCTCT	NA	False	NA	NA	False	AAAACA	-13	NA	19874174	19972578	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8561_5	chr11	+	4571	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-269	-1450	-202	1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTTTGGGGTATTTG	NA	False	NA	4	True	TATAAA	-16	NA	19874172	19974027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
Isoform_8562_535	chr11	+	2825	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	2	0	-1	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151433	20176856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
Isoform_8570_10	chr11	+	2730	5	NIC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_2	830.517007652462	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151432	20176856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
Isoform_8573_9	chr11	+	2019	3	NIC	ENSMUSG00000049800.14	novel	639	3	NA	NA	-115	47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATATA	NA	False	NA	11	True	NA	NA	NA	20493137	20599112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_20493761_20545129_20545215_20597801
Isoform_8575_29	chr11	+	1901	3	NIC	ENSMUSG00000049800.14	novel	639	3	NA	NA	3	47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATATA	NA	False	NA	11	True	NA	NA	NA	20493255	20599112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_20493761_20545129_20545215_20597801
Isoform_8576_35	chr11	+	1814	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	-78	3911	3	45	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAATATA	NA	False	NA	9	True	NA	NA	NA	20493255	20599110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_20493761_20597801
Isoform_8577_16	chr11	+	1936	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	-198	3909	-117	47	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATATA	NA	False	NA	11	True	NA	NA	NA	20493135	20599112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_20493761_20597801
Isoform_8579_68	chr11	+	1608	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	-2	3909	-2	47	multi-exon	FALSE	canonical	3	14	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATATA	NA	False	NA	11	True	NA	NA	NA	20581976	20599112	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_20582274_20597801
Isoform_858_3	chr10	-	2513	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	-3	3	-3	0	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42354564	42188583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
Isoform_8582_3	chr11	+	3474	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	5	35	-5	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCTATGCGAATTTGT	NA	False	NA	22	True	AGTAAA	-10	NA	21041325	21100318	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
Isoform_8583_3	chr11	+	2716	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	3	795	3	126	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTATTTGGATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	21041293	21099528	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
Isoform_8585_3	chr11	+	2662	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-186	316	-186	-316	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTGTTTTCATAATGT	NA	False	NA	NA	False	AATAAA	-9	NA	21522048	21848673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
Isoform_8586_7	chr11	+	2583	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-107	316	-107	-316	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTGTTTTCATAATGT	NA	False	NA	NA	False	AATAAA	-9	NA	21522127	21848673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
Isoform_8587_7	chr11	+	1381	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	184	3	184	-3	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGCTTATCTGTGTAG	NA	False	NA	4	True	ATTAAA	-13	NA	22462271	22469231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
Isoform_8588_11	chr11	+	1213	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	354	1	354	-1	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTATCTGTGTAGTT	NA	False	NA	6	True	ATTAAA	-15	NA	22462441	22469233	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
Isoform_859_5	chr10	-	2409	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3147	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	15.7524248574272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42351129	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42350930
Isoform_8593_3673	chr11	+	1918	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	123	443	3	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	3673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940641	22953337	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
Isoform_860_4	chr10	-	2365	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9303	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	17.736497211494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344973	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42344818
Isoform_861_7	chr10	-	2350	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9281	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	15.99717857068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344995	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42344855
Isoform_862_3	chr10	-	2410	13	NNC	ENSMUSG00000038302.15	novel	2552	14	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.0020101275862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42354236	42188583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354033
Isoform_8624_258	chr11	+	4036	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-55	2023	-18	-7	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206022	23246226	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_8626_26	chr11	+	4139	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-145	2010	-108	6	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTTTGTATAAGAAA	NA	False	NA	18	True	ATTAAA	-27	NA	23205932	23246239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_8628_140	chr11	+	4804	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-36	1236	1	-584	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206041	23247013	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
Isoform_863_3	chr10	-	2154	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	19.5376305693516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354426	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42354258
Isoform_864_6	chr10	-	2304	12	NIC	ENSMUSG00000038302.15	novel	2552	14	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	11.696577164084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42354407	42188583	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42354258
Isoform_8641_6	chr11	+	1923	14	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	12	-56623	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	6.44962271269372	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAAGAAGAAGAAGATG	354	False	NA	NA	False	NA	NA	NA	23256927	23314029	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790
Isoform_8643_41	chr11	+	3414	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	145	0	-36	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616151	23682876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_8647_19	chr11	+	3154	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-116	-7	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	False	NA	3	True	ATTAAA	-10	NA	23616394	23682869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_8648_4	chr11	+	3383	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616172	23682876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
Isoform_865_4	chr10	-	2366	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3138	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	18.3127106650224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42351138	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42350930
Isoform_8650_67	chr11	+	1185	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	472	0	-17	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAAGCAAA	NA	False	NA	-14	True	NA	NA	NA	26337201	26421404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_8651_28	chr11	+	1658	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	-1	0	1	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAGTCATTAACACCCC	NA	False	NA	14	True	AATAAA	-16	NA	26337201	26421877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
Isoform_8653_10	chr11	+	2398	14	ISM	ENSMUSG00000020464.16	ENSMUST00000154924.8	3368	27	2	15042	-2	1168	5prime_fragment	FALSE	canonical	3	488	junction_10	65.0279866923038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCCTATTC	NA	False	NA	NA	False	NA	NA	NA	29080745	29096638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428
Isoform_8656_275	chr11	+	2556	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	155	0	-7	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCTATTTTTATAT	NA	False	NA	1	True	AATAAA	-13	NA	29080743	29111673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
Isoform_8657_19	chr11	+	3353	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	-642	0	642	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTAAGGTATGTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	29080743	29112470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
Isoform_866_4	chr10	-	2314	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9303	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	20.1551830792647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGTCTGATTCATTT	NA	False	NA	2	True	AATAAA	-19	NA	42344973	42188579	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42344818
Isoform_8662_19	chr11	+	2317	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	86	7	86	-7	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACTTATTTTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	29122975	29159634	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
Isoform_8665_8	chr11	+	2540	14	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	29	9017	29	2139	5prime_fragment	FALSE	canonical	3	259	junction_3	32.5538243420023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAAAGGTACTAATG	NA	False	NA	NA	False	NA	NA	NA	29122918	29161780	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606
Isoform_8669_9	chr11	+	4245	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	86	794	86	-794	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGGCTTCTGTTTGT	NA	False	NA	11	True	ATTAAA	-20	NA	29122975	29170003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
Isoform_867_4	chr10	-	2289	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	9290	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	18.5374314195997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42344986	42188580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42344855
Isoform_8671_6	chr11	+	4302	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	29	794	29	-794	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGGCTTCTGTTTGT	NA	False	NA	11	True	ATTAAA	-20	NA	29122918	29170003	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
Isoform_8679_12	chr11	+	2530	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-707	41519	-17	2058	5prime_fragment	FALSE	canonical	3	45	junction_8	7.3404804380384	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAGACAAATGAAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	29323640	29413286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
Isoform_8681_4	chr11	+	2630	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-807	41519	-117	2058	5prime_fragment	TRUE	canonical	3	45	junction_8	7.3404804380384	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAGACAAATGAAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	29323540	29413286	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
Isoform_8683_3	chr11	+	2441	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-46	30	-6	1	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29476401	29495249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
Isoform_8689_26	chr11	+	2951	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-12	-198	-2	167	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGTAAATATTTTC	NA	False	NA	0	True	NA	NA	NA	29476444	29495446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
Isoform_8690_28	chr11	+	2763	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-21	-1	0	1	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29476435	29495249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
Isoform_8698_20	chr11	+	4616	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	2	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642948	29692916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_8701_408	chr11	+	2200	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	0	1415	0	0	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642946	29692916	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_8706_8	chr11	+	1601	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	170	2	170	-2	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGTTTAGTGTTT	NA	False	NA	12	True	AATAAA	-12	NA	29668732	29692914	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
Isoform_8707_36	chr11	+	1932	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	63	1233	10	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904457	31051471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
Isoform_8708_5	chr11	+	1434	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	-2	568	-2	-568	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATACAATGTGAATTT	2282	False	NA	NA	False	AATATA	-17	NA	31915589	31929083	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
Isoform_8709_6	chr11	+	2304	5	FSM	ENSMUSG00000020297.11	ENSMUST00000020537.9	2239	5	-66	1	-66	-1	multi-exon	FALSE	canonical	1	5	junction_2	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGACTGTCTGTCCA	NA	False	NA	20	True	AATAAA	-16	NA	31950396	32009201	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_31950597_31951730_31951881_31967650_31967735_32005012_32005124_32007442
Isoform_871_94	chr10	-	797	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-16	79	10	-53	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCTCCTAATTGTCAG	NA	False	NA	0	True	AATAAA	-17	NA	43416980	43401207	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_8711_131	chr11	+	774	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	48	-1	5	1	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAGAAAGCCATAGTA	NA	False	NA	22	True	AATAAA	-23	NA	32155462	32158985	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
Isoform_8713_3	chr11	+	3715	2	FSM	ENSMUSG00000020287.16	ENSMUST00000144903.2	834	2	-33	-2848	-8	1	multi-exon	FALSE	canonical	3	333	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32176496	32181245	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32176718_32177751
Isoform_8714_236	chr11	+	1048	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	13	676	-6	2	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176523	32182024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
Isoform_8716_9	chr11	+	1739	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	False	NA	6	True	NA	NA	NA	32176508	32182700	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
Isoform_8717_4	chr11	+	2103	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-2	2	intron_retention	FALSE	canonical	3	350	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176502	32182024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32177950_32179848_32180054_32181573
Isoform_8718_3	chr11	+	553	3	FSM	ENSMUSG00000069919.8	ENSMUST00000093209.4	699	3	164	-18	-136	18	multi-exon	FALSE	canonical	1	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGCATGCCTGGTTC	7161	False	NA	NA	False	AATAAA	-14	NA	32233674	32234483	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32233802_32233923_32234129_32234262
Isoform_8719_4	chr11	+	3537	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-29	3905	-29	-3905	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCACATGGTCCATGAG	242	False	NA	NA	False	NA	NA	NA	32297790	32374268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
Isoform_872_84	chr10	-	853	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-16	23	10	3	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTCCTGTCAT	NA	False	NA	-35	True	CATAAA	-19	NA	43416980	43401151	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_8720_4	chr11	+	3231	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	32	4150	12	-4150	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGAATCAGCCTCCGGG	303	False	NA	NA	False	NA	NA	NA	32297851	32374023	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
Isoform_8721_46	chr11	+	3024	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	10	-2022	10	2022	multi-exon	FALSE	canonical	3	148	junction_1	5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTTGCCATTAT	4491	False	NA	13	True	TTTAAA	-19	NA	32405379	32468709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32405547_32449224_32449462_32466089
Isoform_8722_3	chr11	+	3349	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	-310	-2027	-310	2027	multi-exon	FALSE	canonical	3	148	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGCCATTATTTCTC	4171	False	NA	18	True	TTTAAA	-24	NA	32405059	32468714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32405547_32449224_32449462_32466089
Isoform_8724_10	chr11	+	5022	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	10	-6	10	6	multi-exon	FALSE	canonical	3	12	junction_8	17.3190824607989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTGTTGTTCTTTCTG	NA	False	NA	7	True	AATAAA	-18	NA	32483314	32574593	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
Isoform_8725_5	chr11	+	3335	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	-24	1715	-24	-1715	multi-exon	TRUE	canonical	3	12	junction_8	17.3190824607989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTTATTGTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	32483280	32572872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
Isoform_8727_4	chr11	+	4113	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	13	-72	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592736	32696717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8728_3	chr11	+	4187	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTCTGTCACATTT	NA	False	NA	2	True	AATAAA	-13	NA	32592732	32696787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8729_11	chr11	+	4040	13	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	20	-75	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTTCCTGGCGAT	NA	False	NA	36	True	AATAAA	-27	NA	32592743	32696714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_873_97	chr10	-	849	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	7	4	5	-4	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGGTCACCGGAGCA	NA	False	NA	-16	True	AATAAA	-13	NA	43416957	43401132	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
Isoform_8730_4	chr11	+	4029	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	-109	99	-18	-72	multi-exon	FALSE	canonical	3	19	junction_2	161.467713445156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592765	32696717	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8731_5	chr11	+	3967	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	-108	79	-26	-79	multi-exon	FALSE	canonical	3	26	junction_2	161.315167710086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592757	32696710	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8732_72	chr11	+	3958	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	9	-146	9	-74	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTTCCTGGCGATT	NA	False	NA	37	True	AATAAA	-28	NA	32592732	32696715	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8733_10	chr11	+	4039	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	0	-218	0	-2	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTCTGTCACATTT	NA	False	NA	2	True	AATAAA	-13	NA	32592723	32696787	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8734_15	chr11	+	3941	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTGTCACATTTCTC	NA	False	NA	5	True	AATAAA	-16	NA	32592761	32696790	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8735_56	chr11	+	3839	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	12	93	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCTAAGTAATGTC	NA	False	NA	-16	True	AATAAA	-24	NA	32592735	32696662	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8736_38	chr11	+	3864	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-26	-80	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGACCTGGCTTCCTG	NA	False	NA	31	True	AATAAA	-43	NA	32592757	32696709	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
Isoform_8738_3	chr11	+	2899	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	112	4365	112	-4365	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	35660422	35677747	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
Isoform_874_4	chr10	-	1292	3	ISM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	8	4749	6	3272	5prime_fragment	FALSE	canonical	3	617	junction_2	155.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	43416956	43405877	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_43406667_43408671_43409154_43416935
Isoform_8740_150	chr11	+	1585	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-9	1	-9	-1	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624484	40630872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
Isoform_8742_151	chr11	+	1339	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	237	1	-42	-1	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624730	40630872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
Isoform_8753_6	chr11	+	1282	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-62	-493	-62	-3	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTTACTTTTTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	40624710	40630870	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
Isoform_8755_6	chr11	+	1520	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-301	-492	-22	-4	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTTTACTTTTTCTT	NA	False	NA	25	True	AATAAA	-17	NA	40624471	40630869	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
Isoform_8757_8	chr11	+	1238	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-99	-562	-99	-1	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624932	40630872	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
Isoform_8758_25	chr11	+	1616	15	ISM	ENSMUSG00000020409.11	ENSMUST00000151880.8	1662	16	19	130	4	-130	5prime_fragment	FALSE	canonical	3	72	junction_1	66.4258063940668	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTGTGACCGTCTGC	NA	False	NA	NA	False	AAGAAA	-19	NA	43324589	43336082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010
Isoform_8762_18	chr11	+	2768	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	3	-948	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTGGATTTTCGTACAC	NA	False	NA	12	True	AATAAA	-23	NA	43324573	43337860	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_8764_73	chr11	+	1537	14	ISM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	4	2726	4	-130	5prime_fragment	FALSE	canonical	3	184	junction_1	27.3285943840132	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTGTGACCGTCTGC	NA	False	NA	NA	False	AAGAAA	-19	NA	43324589	43336082	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010
Isoform_8767_42	chr11	+	2671	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	4	950	4	-950	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTTGGATTTTCGTAC	NA	False	NA	10	True	AATAAA	-21	NA	43324589	43337858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_8768_29	chr11	+	1984	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-31	1672	-16	924	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTCTCAACAGTCAAG	NA	False	NA	12	True	AATAAA	-17	NA	43324554	43337136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_8771_3	chr11	+	3617	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	10	-2	10	2	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTGTTTGAAGTAC	NA	False	NA	NA	False	AATAAA	-22	NA	43324595	43338810	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
Isoform_8772_20	chr11	+	1993	6	FSM	ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-29	708	-29	-708	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	43419581	43477116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
Isoform_8774_22	chr11	+	3270	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	8	-1	8	1	multi-exon	FALSE	canonical	3	104	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTGTGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43572832	43598019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43573444_43595360
Isoform_8778_5	chr11	+	2920	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-46	-1060	14	-20	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	75	True	TTTAAA	-36	NA	43572838	43612298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
Isoform_8779_16	chr11	+	2768	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-14	-20	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	75	True	TTTAAA	-36	NA	43572870	43612298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_43573444_43595360_43596305_43611047
Isoform_878_45	chr10	-	1968	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	12	1	12	-1	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTGGATTTTACTATAA	NA	False	NA	NA	False	TATAAA	-5	NA	43777729	43750184	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
Isoform_8780_375	chr11	+	3552	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	17	1	-2	-1	multi-exon	TRUE	canonical	3	286	junction_6	37.2538588605261	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGTATTCCTGTGATG	9744	False	NA	11	True	AATAAA	-17	NA	44409807	44456346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
Isoform_8782_6	chr11	+	3447	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-6	-1	combination_of_known_splicesites	TRUE	canonical	1	5	junction_2	114.049155527532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGTATTCCTGTGATG	9740	False	NA	11	True	AATAAA	-17	NA	44409803	44456346	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_44410102_44415754_44415971_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
Isoform_8786_93	chr11	+	3469	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-24	7	-24	-7	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAACGTGGGCCCGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742766	45801445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
Isoform_879_4	chr10	-	1943	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	77	-39	-2	39	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGCATTCTGCATA	NA	False	NA	NA	False	TATAAA	-45	NA	43777664	43750144	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
Isoform_8790_356	chr11	+	3385	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	6	7	6	-7	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAACGTGGGCCCGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742796	45801445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
Isoform_8798_4	chr11	+	2042	12	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	48	19263	-18	-9568	5prime_fragment	FALSE	canonical	3	440	junction_1	23.2161955439988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	45946866	46018907	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072
Isoform_8800_40	chr11	+	6331	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	50	2	-16	-2	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTCTGTTTGGATGG	NA	False	NA	13	True	ATTAAA	-18	NA	45946868	46038168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
Isoform_8802_15	chr11	+	6394	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	-13	2	-13	-2	multi-exon	TRUE	canonical	3	430	junction_20	39.4256282802095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTCTGTTTGGATGG	NA	False	NA	13	True	ATTAAA	-18	NA	45946805	46038168	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
Isoform_8803_11	chr11	+	1271	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	11	-89	2	89	multi-exon	FALSE	canonical	3	177	junction_1	179.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTCCAAAATAATATAG	NA	False	NA	27	True	AATAAA	-40	NA	46327789	46332443	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_8804_24	chr11	+	1189	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	5	-1	-4	1	multi-exon	FALSE	canonical	3	177	junction_1	179.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAATTGTCATTCTTGGAA	NA	False	NA	13	True	AATAAA	-15	NA	46327783	46332355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46327837_46330632_46330803_46331389
Isoform_8805_7	chr11	+	1025	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	30	-674	3	5	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCATTCTTGGAAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	46327781	46332359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46327837_46331389
Isoform_8806_50	chr11	+	1350	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	8	1189	4	5	multi-exon	FALSE	canonical	3	262	junction_1	137	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCATTCTTGGAAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	46327808	46332359	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46328019_46330632_46330803_46331389
Isoform_8807_11	chr11	+	1443	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-19	1123	3	71	multi-exon	FALSE	canonical	3	262	junction_1	137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAAAATGTTTAGATT	NA	False	NA	9	True	AATAAA	-22	NA	46327781	46332425	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46328019_46330632_46330803_46331389
Isoform_8808_7	chr11	+	1175	2	FSM	ENSMUSG00000020397.16	ENSMUST00000128940.2	702	2	4	-477	4	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTGTCATTCTTGGA	NA	False	NA	12	True	AATAAA	-14	NA	46327808	46332354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_46328019_46331389
Isoform_8809_4991	chr11	+	1103	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-4	348	-1	-2	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	4991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCTTCTATATGTGAG	NA	False	NA	21	True	AATAAA	-13	NA	48691182	48696913	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
Isoform_882_12	chr10	-	2970	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-53	1299	-4	-1291	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGTCTCTGGGTGGTT	NA	False	NA	NA	False	TATAAA	-23	NA	52258224	52214446	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_883_3	chr10	-	4282	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-74	8	-25	0	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAATATTTTGGTTTA	NA	False	NA	-35	True	AATAAA	-18	NA	52258245	52213155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_8832_7	chr11	+	3925	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	177	-230	-16	-26	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTGTGACTTGTTTT	1343	False	NA	5	True	AATAAA	-14	NA	49094295	49109610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
Isoform_8834_12	chr11	+	3098	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	54	-1	-1	1	multi-exon	TRUE	canonical	2	7	junction_1	35.4432253360529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49135071	49153850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
Isoform_8835_8	chr11	+	2969	3	FSM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1	6	1	-1	multi-exon	FALSE	canonical	2	7	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATAAGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	49135073	49153848	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49135167_49136019_49136445_49151397
Isoform_8836_59	chr11	+	2714	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	251	-2332	251	1	multi-exon	FALSE	canonical	3	30	junction_1	30.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49136308	49153850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49136445_49142376_49142502_49151397
Isoform_8837_49	chr11	+	2589	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1236	4	251	1	3prime_fragment	FALSE	canonical	3	29	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49136308	49153850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_49136445_49151397
Isoform_8838_98	chr11	+	2680	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	42	7	-11	1	multi-exon	FALSE	canonical	3	40	junction_1	25.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	49141380	49153850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49141483_49142376_49142502_49151397
Isoform_884_9	chr10	-	3141	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-52	1127	-3	-1119	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCTCCTGATAGGCT	NA	False	NA	-13	True	AATAAA	-15	NA	52258223	52214274	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_8841_444	chr11	+	2955	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-9	1	0	-1	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685004	49729439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
Isoform_8842_60	chr11	+	3004	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-58	1	-49	-1	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49684955	49729439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
Isoform_8846_13	chr11	+	2150	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	-3	2535	-3	576	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAATTTGTGATGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	49737574	49774713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_8847_7	chr11	+	4359	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	-3	326	-3	-316	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACAGCATGTCCAAT	NA	False	NA	21	True	AATACA	-20	NA	49737574	49776922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_8848_3	chr11	+	4303	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	143	236	1	-226	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	111	True	NA	NA	NA	49737720	49777012	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
Isoform_8850_65	chr11	+	2150	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	-5	2530	-3	581	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGATGTTTTAGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	49737574	49774718	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_8851_9	chr11	+	4436	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	2	237	2	-227	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGATGTTGAAGTGTCG	NA	False	NA	110	True	NA	NA	NA	49737581	49777011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_8852_5	chr11	+	4689	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	-15	1	-13	-1	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTACTTGTGGTTTT	NA	False	NA	13	True	NA	NA	NA	49737564	49777247	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
Isoform_8855_58	chr11	+	1504	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-2	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGCCAGCGTGTGTTT	NA	False	NA	24	True	NA	NA	NA	49916172	49995580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
Isoform_8858_9	chr11	+	2227	7	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	14	21175	8	-586	5prime_fragment	FALSE	canonical	3	128	junction_6	10.6092203085597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	50022236	50041682	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528
Isoform_8859_9	chr11	+	4473	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-16	756	-16	-1	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACACTGTGTGCAGTGCT	NA	False	NA	6	True	AATAAA	-19	NA	50022206	50062856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
Isoform_886_3	chr10	-	4232	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-6	-10	-6	10	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGGGTTCTGAGTAGC	NA	False	NA	-17	True	AATAAA	-36	NA	52258177	52213137	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_8860_6	chr11	+	5192	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-39	-746	-39	-9	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTACTTTGTTTGTT	NA	False	NA	1	True	AATAAA	-9	NA	50022183	50063603	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_8861_76	chr11	+	4413	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-18	12	-18	-12	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022204	50062845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_8862_9	chr11	+	4377	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-39	-12	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022183	50062845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
Isoform_8863_3	chr11	+	5099	20	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	45.2156421344296	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTTGTTTGTTTA	NA	False	NA	3	True	AATAAA	-11	NA	50022217	50063605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049370_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
Isoform_8864_3	chr11	+	4531	22	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-54	-14	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_19	44.9131184468055	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAGCACAC	NA	False	NA	-7	True	AATAAA	-6	NA	50022168	50062843	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50056419_50056504_50058995_50059053_50059522_50059630_50061523
Isoform_8865_6	chr11	+	4325	21	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-35	-12	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	33.4159767177319	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGCACACTG	NA	False	NA	-5	True	AATAAA	-8	NA	50022187	50062845	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
Isoform_8866_10	chr11	+	2312	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	24	-1194	24	1194	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTCTAACT	NA	False	NA	NA	False	NA	NA	NA	50065699	50092136	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
Isoform_8867_98	chr11	+	1140	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	2	0	2	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	7	True	AATAAA	-17	NA	50065677	50090942	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
Isoform_8868_8	chr11	+	2174	15	NIC	ENSMUSG00000036620.15	novel	1725	12	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	52.5656052675403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50101707	50125930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50101858_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_8869_174	chr11	+	2427	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	2	0	2	0	multi-exon	FALSE	canonical	3	193	junction_14	11.6647471695966	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116163	50125930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_8871_5	chr11	+	2490	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	28	0	intron_retention	FALSE	canonical	3	193	junction_13	11.5957551915146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116189	50125930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
Isoform_8872_9	chr11	+	2150	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
Isoform_8873_77	chr11	+	2179	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	49	-3	-1	2	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTGTGCTTTAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50268594	50277357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_8874_35	chr11	+	2227	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	-2	0	-2	0	multi-exon	TRUE	canonical	3	130	junction_1	115.462537790991	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268543	50277354	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_8875_4	chr11	+	2124	13	FSM	ENSMUSG00000007850.17	ENSMUST00000077817.8	2126	13	0	2	0	-1	multi-exon	FALSE	canonical	3	24	junction_12	133.956356906104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268595	50277353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
Isoform_8876_3	chr11	+	2009	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	181.092977960678	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTACACTCTGTCTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	50268585	50277348	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273888_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
Isoform_8877_3	chr11	+	2628	13	ISM	ENSMUSG00000007850.17	ENSMUST00000109142.8	2427	15	807	8	28	-7	3prime_fragment	FALSE	canonical	3	224	junction_3	98.8039585351833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	50268623	50277347	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
Isoform_8879_4	chr11	+	2009	15	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	60.1503643092094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTGAGTATTCTTTA	NA	False	NA	18	True	AGTAAA	-18	NA	51153998	51172596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51159674_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_888_5	chr10	-	4262	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-78	32	-29	-24	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTTCTCTTTC	NA	False	NA	-59	True	ATTAAA	-25	NA	52258249	52213179	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
Isoform_8880_7	chr11	+	1941	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTGAGTATTCTTTA	NA	False	NA	18	True	AGTAAA	-18	NA	51154012	51172596	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8882_20	chr11	+	1926	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTGAGTATTCTTT	NA	False	NA	17	True	AGTAAA	-17	NA	51153935	51172595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8883_17	chr11	+	1900	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	52	-3	2	1	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	16	True	AGTAAA	-16	NA	51153992	51172594	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8885_14	chr11	+	1837	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153967	51172597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8886_4	chr11	+	3337	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	62	junction_2	33.4628151834241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153998	51172591	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_51154097_51157997_51158159_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8887_4	chr11	+	1666	11	FSM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	-35	-4	1	4	multi-exon	FALSE	canonical	1	3	junction_1	50.5050492525252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153977	51172597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51154097_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
Isoform_8889_6	chr11	+	1861	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	30	1225	-2	10	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAGACCCATCAGCAG	NA	False	NA	NA	False	ATTAAA	-25	NA	51475613	51494091	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
Isoform_889_5	chr10	-	1722	6	ISM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	62	28081	62	-23479	5prime_fragment	FALSE	canonical	3	9	junction_5	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAATTAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	53255981	53177619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
Isoform_8890_408	chr11	+	753	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	10	279	10	6	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAAGTGTGTGGGTGTTC	NA	False	NA	22	True	AGTAAA	-17	NA	51510571	51514262	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
Isoform_8891_2067	chr11	+	728	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	38	276	2	9	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTGTGGGTGTTCTTG	NA	False	NA	25	True	AGTAAA	-20	NA	51510599	51514265	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
Isoform_8899_19	chr11	+	1225	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	-26	2	-26	-2	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAGTGTTGGGCAGCT	3539	False	NA	10	True	AATAAA	-16	NA	51654487	51682750	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
Isoform_8900_292	chr11	+	1195	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	7	-1	0	1	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	13	True	AATAAA	-19	NA	51654520	51682753	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
Isoform_8904_312	chr11	+	1806	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	27	-1	27	1	multi-exon	FALSE	canonical	3	1066	junction_1	20	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGGTTCAAGTTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	51858514	51868162	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51858785_51860970_51861071_51866726
Isoform_8907_34	chr11	+	653	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	2	1177	2	-87	multi-exon	FALSE	canonical	3	1066	junction_1	20	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTTGAAATGCCTT	NA	False	NA	-45	True	NA	NA	NA	51858489	51866984	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51858785_51860970_51861071_51866726
Isoform_8909_21	chr11	+	2049	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	12	5041	12	3045	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTGGCAACTCCTT	NA	False	NA	22	True	AATAAA	-18	NA	51989519	52013564	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_891_3	chr10	-	4743	13	ISM	ENSMUSG00000058298.11	ENSMUST00000237608.2	4882	14	405	-3	-75	3	3prime_fragment	FALSE	canonical	3	17	junction_3	8.05536398239638	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCTGTGTGCTTCTA	NA	False	NA	-14	True	AATAAA	-44	NA	53506130	53412407	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_8910_490	chr11	+	1916	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	146	5040	146	3046	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGGCAACTCCTTG	NA	False	NA	23	True	AATAAA	-19	NA	51989653	52013565	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_8911_203	chr11	+	2619	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	146	4337	146	3749	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	60	True	NA	NA	NA	51989653	52014268	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_8912_144	chr11	+	1942	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	118	5042	118	3044	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTCTGGCAACTCCT	NA	False	NA	21	True	AATAAA	-17	NA	51989625	52013563	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
Isoform_892_8	chr10	-	4660	13	ISM	ENSMUSG00000058298.11	ENSMUST00000075540.8	4868	14	469	2	-11	-2	3prime_fragment	FALSE	canonical	3	17	junction_3	8.05536398239638	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAGATGACTAAACTCT	NA	False	NA	4	True	AATAAA	-30	NA	53506066	53412426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_8930_51	chr11	+	1274	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	-18	184	-4	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	393	False	NA	14	True	ATTAAA	-17	NA	52122817	52137501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_8932_1215	chr11	+	1228	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	184	0	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_8933_205	chr11	+	1392	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	20	0	-20	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGCTTTTGTGGATG	439	False	NA	14	True	AATAAA	-21	NA	52122863	52137665	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
Isoform_894_4	chr10	-	1631	7	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	424	2340	-56	-2340	3prime_fragment	FALSE	canonical	3	32	junction_3	5.08811250749125	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAGGTCTATGTCCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	53506111	53487273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
Isoform_895_3	chr10	-	5076	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	59	2	0	-2	multi-exon	TRUE	canonical	3	6	junction_11	2.28977194400568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTCTTGTCACTG	5542	False	NA	NA	False	AATAAA	-17	NA	53951833	53780882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
Isoform_8953_273	chr11	+	1861	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	161	0	-114	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5292	False	NA	30	True	AATAAA	-26	NA	52251847	52280224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
Isoform_8954_2486	chr11	+	1800	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	222	0	-53	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5353	False	NA	30	True	AATAAA	-26	NA	52251908	52280224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
Isoform_896_7	chr10	-	2874	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	35	2228	-24	2	multi-exon	FALSE	canonical	3	6	junction_11	2.28977194400568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGCTTTTTTTT	5518	False	NA	NA	False	AATAAA	-12	NA	53951857	53783108	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
Isoform_8966_170	chr11	+	2439	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	31	2	31	-2	multi-exon	FALSE	canonical	3	140	junction_1	2	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTCTGTTAGTGTG	4589	False	NA	NA	False	AATAAA	-14	NA	52287285	52299553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52287431_52293872_52294385_52297771
Isoform_8967_47	chr11	+	2472	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	-2	2	-2	-2	multi-exon	FALSE	canonical	3	140	junction_1	2	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTCTGTTAGTGTG	4556	False	NA	NA	False	AATAAA	-14	NA	52287252	52299553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_52287431_52293872_52294385_52297771
Isoform_897_23	chr10	-	2854	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	19	7	19	-7	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACGTGTGGTGGTAG	NA	False	NA	NA	False	AATAAA	-9	NA	57408607	57391876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
Isoform_8970_59	chr11	+	1194	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	13	60	13	-60	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCTGATTTTTCTAT	NA	False	NA	33	True	AATAAA	-27	NA	53215518	53224068	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
Isoform_8971_30	chr11	+	1263	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	3	1	3	-1	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGATGTAAGTTTCAAG	NA	False	NA	13	True	TATAAA	-26	NA	53215508	53224127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
Isoform_8976_12	chr11	+	3114	15	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-63	13924	-63	-1624	5prime_fragment	FALSE	canonical	3	75	junction_1	16.7443258741459	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGCAAAAAAACTCAAAC	NA	False	NA	NA	False	TTTAAA	-44	NA	53241596	53298733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706
Isoform_8978_8	chr11	+	4515	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	47	1	47	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410673	53434922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_898_63	chr10	-	2820	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	53	7	0	-7	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACGTGTGGTGGTAG	NA	False	NA	NA	False	AATAAA	-9	NA	57408573	57391876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
Isoform_8980_3	chr11	+	4589	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-29	3	1	-2	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTTCATGGTGTCATT	NA	False	NA	14	True	ATTAAA	-16	NA	53410597	53434920	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8981_10	chr11	+	2297	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	77	2189	-31	9	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410703	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8982_5	chr11	+	2399	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-25	2189	5	9	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410601	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8983_17	chr11	+	4302	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	134	0	-28	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410706	53434922	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8984_5	chr11	+	4397	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	38	1	14	-1	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410610	53434921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8985_6	chr11	+	2230	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	18	2188	-6	9	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410590	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8986_19	chr11	+	2116	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	132	2188	-30	9	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410704	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8987_9	chr11	+	4467	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410714	53434921	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8988_3	chr11	+	4569	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGTCATTTTTGGG	NA	False	NA	20	True	ATTAAA	-22	NA	53410617	53434926	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8990_3	chr11	+	2400	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-1	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGACTTCTTTATGG	NA	False	NA	10	True	AATAAA	-17	NA	53410595	53432735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
Isoform_8991_3	chr11	+	4287	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTTCATGGTGTCAT	NA	False	NA	13	True	ATTAAA	-15	NA	53410712	53434919	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8992_8	chr11	+	2080	10	NIC	ENSMUSG00000018398.19	novel	1806	10	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410734	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8993_3	chr11	+	2219	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGACTTCTTTATG	NA	False	NA	9	True	AATAAA	-16	NA	53410595	53432734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
Isoform_8997_4	chr11	+	2273	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	15	2	-3	1	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGAGAGAACTCCTTA	934	False	NA	19	True	AATAAA	-16	NA	53458220	53491930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
Isoform_8999_47	chr11	+	2129	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	8	-1	8	1	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	11	True	TATAAA	-18	NA	53660848	53668150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_9001_12	chr11	+	2133	10	NNC	ENSMUSG00000018899.18	novel	2136	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.1348281512179	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	11	True	TATAAA	-18	NA	53660842	53668150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664753_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_9002_4	chr11	+	2688	9	ISM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	454	-1	-8	1	3prime_fragment	FALSE	canonical	3	59	junction_3	8.3132048573339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	11	True	TATAAA	-18	NA	53661294	53668150	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
Isoform_9003_3	chr11	+	599	5	FSM	ENSMUSG00000018906.15	ENSMUST00000135596.9	610	5	30	-19	14	19	multi-exon	FALSE	canonical	3	54	junction_4	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCCCAGTAGTAACATT	NA	False	NA	NA	False	TTTAAA	-35	NA	53991830	54002480	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248
Isoform_9004_93	chr11	+	2219	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	57	-13	1	0	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGAGTGTTTTGGT	NA	False	NA	28	True	AATAAA	-30	NA	53991806	54022491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_9005_69	chr11	+	2221	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	12	-3	0	3	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAGCCTTATTTTGGA	NA	False	NA	18	True	AATAAA	-20	NA	53991800	54022481	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_9006_3	chr11	+	2378	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	-156	8	-117	-8	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGAAGCCTTAAATAGC	NA	False	NA	7	True	AATAAA	-9	NA	53991632	54022470	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_9007_3	chr11	+	2607	15	ISM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	134	1	-10	-1	3prime_fragment	FALSE	canonical	3	31	junction_11	15.186594518233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAATAGCCTTATTT	NA	False	NA	14	True	AATAAA	-16	NA	53991883	54022477	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_9010_5	chr11	+	2630	15	NIC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-29	-3	intron_retention	FALSE	canonical	3	35	junction_11	14.555313217418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTAAATAGCCTTAT	NA	False	NA	12	True	AATAAA	-14	NA	53991864	54022475	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
Isoform_9011_3	chr11	+	1827	12	NIC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	24.1373480367652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGAGTGTTTTGGT	NA	False	NA	28	True	AATAAA	-30	NA	54004004	54022491	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_54004156_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
Isoform_9012_22	chr11	+	2522	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	41	3241	41	-13	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54194664	54252341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_9014_19	chr11	+	2547	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	16	-13	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54194639	54252341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_9015_6	chr11	+	2583	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	-13	3237	-13	-13	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54195014	54252341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_9016_6	chr11	+	2594	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108904.10	2594	21	-24	24	-24	-13	multi-exon	FALSE	canonical	3	10	junction_1	12.5876924017073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAGAAAAAACATAA	NA	False	NA	-15	True	AATATA	-27	NA	54195003	54252341	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
Isoform_9019_3	chr11	+	6303	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-47	-1	-47	1	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1929	False	NA	28	True	AATAAA	-18	NA	54328977	54409062	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
Isoform_902_19	chr10	-	2191	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	347	-6	347	6	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057322	58999935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
Isoform_9022_6	chr11	+	1858	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	-29	0	14	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	54413686	54525835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
Isoform_9028_4	chr11	+	6032	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	42	2115	0	191	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	54413714	54587996	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
Isoform_903_7	chr10	-	2193	10	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	357	6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	15.7181973646809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057312	58999935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
Isoform_9030_1338	chr11	+	558	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	71	7	-27	-7	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTGGATTTGTTAC	NA	False	NA	27	True	AATAAA	-16	NA	54757279	54761320	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54757427_54760673_54760779_54761014
Isoform_9031_706	chr11	+	631	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	5	0	-5	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGGATTTGTTACTC	NA	False	NA	29	True	AATAAA	-18	NA	54757208	54761322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54757427_54760673_54760779_54761014
Isoform_9034_33	chr11	+	1440	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	154	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793751	54801203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
Isoform_9036_29	chr11	+	2072	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-76	2131	-76	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988864	55001724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
Isoform_9037_358	chr11	+	2047	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-51	2131	-51	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988889	55001724	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
Isoform_9038_10	chr11	+	5209	13	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	23.3896641465603	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	NA	False	NA	24	True	AATAAA	-24	NA	55095168	55127156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123713_55123733_55126998_55127038
Isoform_9039_3	chr11	+	4430	13	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	22.5314594881616	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	NA	False	NA	23	True	AATAAA	-23	NA	55095172	55127155	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327_55126998_55127038
Isoform_904_12	chr10	-	3750	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	347	22487	347	6	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057322	58999935	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
Isoform_9045_904	chr11	+	2328	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	49	4326	16	-4326	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGGGGAACTGTA	NA	False	NA	39	True	AATAAA	-26	NA	55360559	55391338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_9046_580	chr11	+	2693	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	52	3958	19	-3958	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCATCTGGCAATGTA	NA	False	NA	14	True	ATTAAA	-15	NA	55360562	55391706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_9047_102	chr11	+	2406	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-29	4326	-29	-4326	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGGGGGAACTGTA	NA	False	NA	39	True	AATAAA	-26	NA	55360481	55391338	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
Isoform_905_105	chr10	-	2858	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	13	1	0	-1	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCATCTCGTTCTTT	5643	False	NA	-2	True	AATAAA	-19	NA	59452501	59282806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
Isoform_906_34	chr10	-	2894	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	-23	1	-23	-1	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGGCATCTCGTTCTTT	5607	False	NA	-2	True	AATAAA	-19	NA	59452537	59282806	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
Isoform_907_959	chr10	-	1749	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	1	5	1	-5	multi-exon	FALSE	canonical	3	721	junction_1	4.5	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTGAGTCTCATCGG	NA	False	NA	-9	True	AATAAA	-12	NA	59787655	59785495	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59786852_59787138_59787395_59787518
Isoform_9088_24	chr11	+	4830	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	-1	10	0	-10	multi-exon	FALSE	canonical	3	62	junction_1	12.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTCAGAGTTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	57409511	57424630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57409575_57418684_57419116_57420294
Isoform_9091_6	chr11	+	1757	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	-10	-2	-10	2	multi-exon	FALSE	canonical	3	46	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGTGTCTGCCTGGTT	NA	False	NA	NA	False	AGTAAA	-26	NA	57536280	57617739	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57536544_57612120_57612224_57616348
Isoform_9093_4	chr11	+	4698	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	2	15	2	-15	multi-exon	TRUE	canonical	3	24	junction_9	7.98034776267445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTCTGGCATGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	57536269	57678325	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
Isoform_9095_33	chr11	+	1171	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-22	2	-22	-2	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTCGGTCAGGAGGAT	NA	False	NA	22	True	AATAAA	-22	NA	57692440	57701041	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
Isoform_9096_278	chr11	+	2183	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-149	1	-149	-1	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGAAGTGTGGTCTTT	NA	False	NA	13	True	AATAAA	-18	NA	57994829	58009419	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_9097_57	chr11	+	2213	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-177	-1	-177	1	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAAGTGTGGTCTTTGC	NA	False	NA	15	True	AATAAA	-20	NA	57994801	58009421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
Isoform_9102_367	chr11	+	717	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	6	-1	6	1	multi-exon	FALSE	canonical	3	1080	junction_1	114.661821603066	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1487	False	NA	13	True	AGTAAA	-16	NA	58062492	58070392	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
Isoform_9103_18	chr11	+	907	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	4	10	combination_of_known_junctions	TRUE	canonical	3	41	junction_2	483.207138698187	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTATTGAAGTGTAGT	1485	False	NA	22	True	AGTAAA	-25	NA	58062490	58070401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
Isoform_9107_3	chr11	+	1957	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	41	24	9	2	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTAAAGTTGCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	58090422	58098393	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58090606_58092293_58092544_58096869
Isoform_9108_7	chr11	+	3517	2	FSM	ENSMUSG00000069874.8	ENSMUST00000108836.2	3459	2	-59	1	-39	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGTATTATTTTTGTT	1535	False	NA	NA	False	AATAAA	-22	NA	58105794	58113604	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58105997_58110289
Isoform_9110_3	chr11	+	1347	2	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-109	5963	-6	-5949	intron_retention	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGATTAGAAAAAA	7667	False	NA	NA	False	NA	NA	NA	58197888	58199490	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_58198083_58198337
Isoform_9111_59	chr11	+	1957	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-111	14	-8	0	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7665	False	NA	14	True	AATAAA	-21	NA	58197886	58205439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9113_3	chr11	+	2479	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-100	-519	3	519	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGGCATTTGTCACA	7676	False	NA	NA	False	NA	NA	NA	58197897	58205972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9115_23	chr11	+	2233	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATGCTTTGGTGCTAC	7671	False	NA	8	True	AATAAA	-15	NA	58197892	58205433	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9116_8	chr11	+	2318	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	82	junction_1	26.418755029031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTATGCTTTGGTGCT	7667	False	NA	6	True	AATAAA	-13	NA	58197888	58205431	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9117_3	chr11	+	2240	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_5	49.3380878589781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTTGGTGCTACAG	7672	False	NA	10	True	AATAAA	-17	NA	58197893	58205435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9118_4	chr11	+	2437	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	9	-2	intron_retention	FALSE	canonical	3	82	junction_1	27.7666644435551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7682	False	NA	12	True	AATAAA	-19	NA	58197903	58205437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9119_3	chr11	+	2532	9	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	82	junction_1	27.6710588883042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTTGGTGCTACAG	7668	False	NA	10	True	AATAAA	-17	NA	58197889	58205435	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9121_25	chr11	+	1887	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	49.3946830209872	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7673	False	NA	14	True	AATAAA	-21	NA	58197894	58205439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9122_8	chr11	+	2174	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7673	False	NA	13	True	AATAAA	-20	NA	58197894	58205438	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9123_5	chr11	+	2264	10	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	39	junction_1	36.8269225190243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7665	False	NA	12	True	AATAAA	-19	NA	58197886	58205437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
Isoform_9124_164	chr11	+	2983	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-7	1	-7	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	462	False	NA	15	True	AATAAA	-16	NA	58221568	58238550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
Isoform_9126_73	chr11	+	2987	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	25	4	-1	-1	multi-exon	FALSE	canonical	3	32	junction_1	38.7101049110206	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	468	False	NA	15	True	AATAAA	-16	NA	58221574	58238550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
Isoform_9129_9	chr11	+	2813	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	40	1013	-11	-1013	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTGAATGAAAAAAGAA	NA	False	NA	NA	False	AATATA	-1	NA	58758081	58773101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
Isoform_913_10	chr10	-	1320	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	33	499	9	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838924	59823729	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
Isoform_9130_7	chr11	+	2315	7	FSM	ENSMUSG00000020455.17	ENSMUST00000108810.10	2301	7	-14	0	8	0	multi-exon	FALSE	canonical	1	1	junction_3	38.6566078870525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	15	True	AATAAA	-15	NA	58868926	58882284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58878458_58878507_58879550_58879574_58879654_58879756_58881012
Isoform_9131_4	chr11	+	3580	4	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	10	-1	10	0	intron_retention	FALSE	canonical	2	58	junction_2	14.4299072146089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1699	False	NA	15	True	AATAAA	-15	NA	58868951	58882284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550
Isoform_9132_47	chr11	+	3524	5	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	-15	-1	8	0	intron_retention	FALSE	canonical	2	58	junction_2	15.6264999280069	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	15	True	AATAAA	-15	NA	58868926	58882284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654
Isoform_9134_209	chr11	+	2267	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	-15	-1	8	0	multi-exon	FALSE	canonical	2	58	junction_2	16.6781293915115	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	15	True	AATAAA	-15	NA	58868926	58882284	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
Isoform_9135_3	chr11	+	2272	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTCTCTGCTTATCCTG	1674	False	NA	13	True	AATAAA	-13	NA	58868926	58882282	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_58869471_58872066_58872163_58872818_58873054_58879628_58879756_58881012
Isoform_9136_4	chr11	+	821	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	14	-117	-2	3	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTGGGGTTGACTCTT	NA	False	NA	15	True	ATTAAA	-29	NA	59093328	59096831	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
Isoform_9137_13	chr11	+	695	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	22	1	6	-1	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093336	59096713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
Isoform_9138_98	chr11	+	674	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	19	247	6	-1	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093336	59096713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_9139_15	chr11	+	938	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	3	-1	3	1	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGCTTCAGACCTCTG	NA	False	NA	2	True	NA	NA	NA	59093320	59096961	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_914_10	chr10	-	636	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	33	1183	9	-6	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCGCGGAGATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59838924	59824413	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
Isoform_9140_28	chr11	+	787	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	19	134	6	-2	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGACTTTTGGGGTTGA	NA	False	NA	10	True	ATTAAA	-24	NA	59093336	59096826	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
Isoform_9141_7	chr11	+	581	3	NIC	ENSMUSG00000036860.15	novel	940	4	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	260	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGTCATTGTCTTCT	NA	False	NA	8	True	NA	NA	NA	59093345	59096713	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_59093486_59095381_59095584_59096474
Isoform_9142_6	chr11	+	413	2	NIC	ENSMUSG00000036860.15	novel	718	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093312	59096714	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_59093486_59096474
Isoform_9145_22	chr11	+	1233	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	47	5	47	-5	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGAGTGTATATTATC	NA	False	NA	2	True	AGTAAA	-10	NA	59099193	59101559	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
Isoform_9146_7	chr11	+	2078	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	47	-840	47	840	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCCAGCTTCTTCAGT	NA	False	NA	NA	False	AATAAA	-32	NA	59099193	59102404	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
Isoform_9147_5	chr11	+	3304	4	FSM	ENSMUSG00000000126.12	ENSMUST00000108783.4	3318	4	7	7	7	-7	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTAAGTCCGATGTTT	5625	False	NA	NA	False	AATAAA	-18	NA	59197762	59224371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59197894_59218389_59218647_59219327_59219591_59221718
Isoform_9148_6	chr11	+	1941	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	41	2369	-35	-2	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTTCCTTTTTTA	9522	False	NA	13	True	NA	NA	NA	59340911	59346930	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
Isoform_9151_3	chr11	+	1895	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	2	2462	2	-1	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGAGTTCCTTTTTTAT	9483	False	NA	14	True	NA	NA	NA	59340872	59346931	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
Isoform_9152_5	chr11	+	653	2	FSM	ENSMUSG00000087249.2	ENSMUST00000151825.2	771	2	-11	129	-11	-129	multi-exon	FALSE	canonical	1	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTAATGTCTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	59700894	59709188	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59701088_59708728
Isoform_9153_7	chr11	+	1323	5	FSM	ENSMUSG00000032615.15	ENSMUST00000149076.8	1316	5	-9	2	-9	-2	multi-exon	FALSE	canonical	3	8	junction_1	25.0337272494529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGTGCTGTGGCCTTC	2636	False	NA	4	True	AATAAA	-14	NA	59730263	59767357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59730583_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_9154_3	chr11	+	1219	4	NIC	ENSMUSG00000032615.15	novel	1316	5	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.9443945740671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGTGCTGTGGCCTTC	2639	False	NA	4	True	AATAAA	-14	NA	59730266	59767357	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_59730583_59751575_59751637_59765378_59765494_59766630
Isoform_9156_16	chr11	+	1328	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	-21	-1	-21	1	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTGGCCTTCTCT	1698	False	NA	7	True	AATAAA	-17	NA	59738877	59767360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_9158_8	chr11	+	1186	5	FSM	ENSMUSG00000032615.15	ENSMUST00000137695.2	1387	5	200	1	200	-1	multi-exon	FALSE	canonical	2	6	junction_1	25.8976350271603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCTGTGGCCTTCT	1950	False	NA	5	True	AATAAA	-15	NA	59739129	59767358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59739311_59743616_59743718_59751575_59751637_59765378_59765494_59766630
Isoform_9159_19	chr11	+	2944	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	12	-1036	12	1036	multi-exon	FALSE	canonical	3	425	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTAGAGATTTTGTTC	NA	False	NA	NA	False	AATAAA	-28	NA	59839043	59854067	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59839305_59851384
Isoform_9161_77	chr11	+	808	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	30	1082	30	-1082	multi-exon	FALSE	canonical	3	425	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTGTTTTGAAAGGC	NA	False	NA	11	True	ATTAAA	-17	NA	59839061	59851949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_59839305_59851384
Isoform_9162_4	chr11	+	2515	8	FSM	ENSMUSG00000056598.17	ENSMUST00000094140.9	2438	8	-71	-6	-71	6	multi-exon	FALSE	canonical	2	6	junction_1	9.45235096552758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGACTCTGTGGTTGCT	3350	False	NA	NA	False	NA	NA	NA	60244083	60268110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619
Isoform_9163_7	chr11	+	2033	14	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-119	-3	at_least_one_novel_splicesite	FALSE	non_canonical	2	6	junction_1	7.40062367434196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTGGTGTCAGTATT	3302	False	NA	NA	False	AATATA	-19	NA	60244035	60285164	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
Isoform_9164_189	chr11	+	4265	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	18	0	18	0	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAATTTGTAAGTCAAA	NA	False	NA	27	True	AATAAA	-18	NA	60308105	60336103	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
Isoform_9172_139	chr11	+	1785	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	11	-8	11	8	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTTTCTGTGCTTGG	NA	False	NA	48	True	NA	NA	NA	60345427	60359588	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
Isoform_9175_303	chr11	+	3077	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	45	2608	45	1537	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGTTGTCTGATGCTG	NA	False	NA	12	True	AATAAA	-21	NA	60428848	60446730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
Isoform_9176_78	chr11	+	3424	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-300	2606	-300	1539	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGTCTGATGCTGTG	NA	False	NA	14	True	AATAAA	-23	NA	60428503	60446732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
Isoform_9188_90	chr11	+	4299	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-36	5	-36	-5	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590634	60605007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
Isoform_9189_42	chr11	+	4436	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-173	5	-51	-5	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590497	60605007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
Isoform_919_3	chr10	-	5258	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	-18	0	-6	0	multi-exon	FALSE	canonical	3	34	junction_2	5.08330601085553	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	-5	True	AATAAA	-21	NA	60588579	60547850	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
Isoform_9191_4	chr11	+	3504	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-48	-910	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	70.2129252722278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCTCTAATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	60590500	60604102	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603925_60603948
Isoform_9192_3	chr11	+	4264	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	23	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	70.2129252722278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTAGTTGTTTTAAT	NA	False	NA	-39	True	NA	NA	NA	60590571	60604934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603924_60603948
Isoform_9193_5	chr11	+	4322	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	-24	5	-24	-5	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590524	60605007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
Isoform_9194_28	chr11	+	4222	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	76	5	-46	-5	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590624	60605007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
Isoform_9195_4	chr11	+	4359	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-51	-5	intron_retention	FALSE	non_canonical	0	0	junction_20	71.9353181684769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCTGCACACATGT	NA	False	NA	34	True	AATAAA	-19	NA	60590619	60605007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603924_60603948
Isoform_9197_13	chr11	+	2789	2	ISM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	49	1	2	-1	intron_retention	FALSE	canonical	3	155	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTGTAATTCTTGCT	NA	False	NA	13	True	AATAAA	-16	NA	60619272	60623776	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_60619394_60621108
Isoform_9198_23	chr11	+	2529	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619263	60623777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
Isoform_9200_129	chr11	+	2524	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619221	60623777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
Isoform_9202_6	chr11	+	2618	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-96	0	-96	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619127	60623777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
Isoform_9204_25	chr11	+	2718	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-47	-1955	-2	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619221	60623777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60619394_60621108_60621619_60621741
Isoform_9205_4	chr11	+	3378	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	17	3996	17	3224	multi-exon	FALSE	canonical	3	54	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTTGAGCCTTCTGGT	NA	False	NA	NA	False	ACTAAA	-15	NA	60668367	60675117	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60671208_60674579
Isoform_9206_4	chr11	+	4440	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	15	2936	15	-2936	multi-exon	FALSE	canonical	3	54	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAGAGGAGTTCTGGT	NA	False	NA	NA	False	TTTAAA	-18	NA	60668365	60676177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60671208_60674579
Isoform_9208_141	chr11	+	1228	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	277	0	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721504	60748972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_9209_5	chr11	+	1344	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	-68	277	-68	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721388	60748972	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_9210_5	chr11	+	1490	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	38	25	-10	-25	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCTATTCATCCTACC	NA	False	NA	NA	False	NA	NA	NA	60721494	60749224	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
Isoform_9211_278	chr11	+	2143	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	24	31	3	-14	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCGT	NA	False	NA	NA	False	NA	NA	NA	60822882	60843606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_9215_6	chr11	+	2091	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	-9	14	3	-14	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCGT	NA	False	NA	NA	False	NA	NA	NA	60822882	60843606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_9216_7	chr11	+	2190	12	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	124.270432910921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCGT	NA	False	NA	NA	False	NA	NA	NA	60822882	60843606	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_60823098_60832705_60832773_60833130_60833227_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
Isoform_9219_18	chr11	+	2579	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-289	1	-289	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913100	60961956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60913677_60959953
Isoform_9221_24	chr11	+	2266	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	24	1	24	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913413	60961956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60913677_60959953
Isoform_9226_11	chr11	+	2713	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-426	4	-426	0	multi-exon	FALSE	canonical	3	70	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGCTTGCTCTTCT	NA	False	NA	26	True	AATAAA	-38	NA	60912963	60961953	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60913677_60959953
Isoform_9228_16	chr11	+	2617	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-327	1	-327	-1	multi-exon	FALSE	canonical	3	70	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTGCTCTTCTGTT	NA	False	NA	29	True	AATAAA	-41	NA	60913062	60961956	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_60913677_60959953
Isoform_923_87	chr10	-	4072	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	29	1	-11	-1	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983394	60934421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
Isoform_9230_4	chr11	+	1233	9	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	4856	10	4856	-10	3prime_fragment	TRUE	canonical	2	6	junction_2	5.14629721255973	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTCGTGCATGCAA	NA	False	NA	NA	False	AATAAA	-11	NA	61104426	61109237	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
Isoform_9231_36	chr11	+	796	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	18	3	18	-3	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGGGCCTTCATTTC	NA	False	NA	20	True	AATAAA	-20	NA	61395987	61403754	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
Isoform_9232_107	chr11	+	766	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	46	5	-13	-5	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTGGGGCCTTCATT	NA	False	NA	18	True	AATAAA	-18	NA	61396015	61403752	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
Isoform_9233_3	chr11	+	593	7	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	-18	4013	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	127.20019217316	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAAGTTGCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	61396010	61407770	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61407673
Isoform_9234_9	chr11	+	3084	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-4	-1742	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.9293765408777	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCACAGTGTCCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	61574912	61599035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_9235_14	chr11	+	3009	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	27	1742	27	-1742	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCACAGTGTCCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	61575271	61599035	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_9236_4	chr11	+	4784	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	-9	3	-9	-3	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTGTTGTCATTGA	NA	False	NA	NA	False	AATAAA	-25	NA	61575235	61600774	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
Isoform_9237_4	chr11	+	1820	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	16	9	16	-9	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCCAGCACGCACTGG	8739	False	NA	NA	False	AATAAA	-11	NA	62139825	62157270	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62140263_62155887
Isoform_9238_3	chr11	+	1513	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	-13	345	-13	-345	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATACTTGTTCCTGGGG	8710	False	NA	NA	False	AATAAA	-15	NA	62139796	62156934	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62140263_62155887
Isoform_9239_5	chr11	+	1037	2	FSM	ENSMUSG00000042298.19	ENSMUST00000136477.2	1025	2	-21	9	-21	-9	multi-exon	FALSE	canonical	3	160	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAGGAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62172277	62173405	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62172520_62172610
Isoform_924_28	chr10	-	4130	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	-29	1	1	-1	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983452	60934421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
Isoform_9240_31	chr11	+	2266	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-33	1177	-22	3	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATGGATTCTAATAAT	NA	False	NA	19	True	AATAAA	-15	NA	62172276	62206075	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_9241_5	chr11	+	3444	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-37	3	-26	-3	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCAAATGTCTGTC	NA	False	NA	11	True	NA	NA	NA	62172272	62207249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
Isoform_9243_11	chr11	+	1974	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-11	211	-11	-211	multi-exon	FALSE	canonical	3	156	junction_1	58.9736287580211	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATATGGGAA	NA	False	NA	NA	False	AATACA	-37	NA	62349274	62405032	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
Isoform_9244_14	chr11	+	1686	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-25	513	-25	-513	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	25	True	AATAAA	-29	NA	62349260	62404730	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
Isoform_9249_254	chr11	+	1166	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	333	0	-172	0	multi-exon	FALSE	canonical	3	35417	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442329	62444039	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62442422_62442965
Isoform_925_163	chr10	-	4068	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	1	1	1	-1	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983452	60934421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
Isoform_9252_8	chr11	+	2704	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1365	213	-222	3	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGTCTTCTAGAAGTAT	8106	False	NA	12	True	TATAAA	-14	NA	62466728	62491128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
Isoform_9255_803	chr11	+	464	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	-2	0	2	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493702	62495635	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
Isoform_9260_3	chr11	+	712	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	105	-474	-44	97	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCTCTATAA	NA	False	NA	NA	False	NA	NA	NA	62539594	62556159	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62539643_62555495
Isoform_9261_5	chr11	+	3599	7	NIC	ENSMUSG00000047821.17	novel	3574	7	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.7017059221718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711260	62733756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_62711464_62711560_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_9263_13	chr11	+	3906	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	-6	6	-6	-6	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711050	62733756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_9265_19	chr11	+	3699	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	201	6	-8	-6	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	62711257	62733756	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
Isoform_9267_33	chr11	+	1790	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	-10	4	-10	-4	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTAGATGTGTGGTCC	9231	False	NA	6	True	TATAAA	-14	NA	62770270	62786007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
Isoform_9269_41	chr11	+	1722	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	58	4	23	-4	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTAGATGTGTGGTCC	9299	False	NA	6	True	TATAAA	-14	NA	62770338	62786007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
Isoform_927_5	chr10	-	4141	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-73	2	-44	1	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983526	60934422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
Isoform_9271_4	chr11	+	1801	7	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-59	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	171.994831963702	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTAGATGTGTGGTCC	9341	False	NA	6	True	TATAAA	-14	NA	62770380	62786007	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_62770543_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
Isoform_9272_10	chr11	+	886	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	15	0	15	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCATGTTTCTTA	4249	False	NA	NA	False	AATAAA	-22	NA	63970324	63974085	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_63970604_63973478
Isoform_9273_334	chr11	+	2915	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-28	-3	8	3	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGTGTGGGGTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	64869871	64892429	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
Isoform_9274_27	chr11	+	3377	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-23	-470	13	1	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	11	True	AATAAA	-19	NA	64869876	64892896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
Isoform_9276_72	chr11	+	2742	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	30	-1	-3	1	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	11	True	AATAAA	-19	NA	64869893	64892896	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
Isoform_9279_5	chr11	+	3302	23	NIC	ENSMUSG00000020549.15	novel	2771	25	NA	NA	0	-4	intron_retention	FALSE	canonical	3	305	junction_17	22.9463981941098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCCTGCTTCAGTGTGG	NA	False	NA	11	True	AATAAA	-11	NA	64869863	64892422	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
Isoform_928_7	chr10	-	4037	15	NIC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	117.157773440566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGATGGTTGATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	60983452	60934421	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983394
Isoform_9280_13	chr11	+	2282	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	-10	-2	-10	1	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGTAGCTGCCTTGT	NA	False	NA	16	True	AATAAA	-22	NA	65697990	65720066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
Isoform_9284_10	chr11	+	2251	7	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	18	1	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_5	10.077477638554	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGTAGCTGCCTTGT	NA	False	NA	16	True	AATAAA	-22	NA	65698018	65720066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
Isoform_9286_9	chr11	+	4181	3	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCAGAAGTGTGTTT	NA	False	NA	4	True	AATAAA	-14	NA	66802802	66820703	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_66802969_66816664_66818954_66818977
Isoform_9288_5	chr11	+	1764	2	ISM	ENSMUSG00000050270.13	ENSMUST00000079077.12	1147	7	2	7234	2	-7234	intron_retention	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	3920	False	NA	NA	False	AATACA	-38	NA	66915981	66918382	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_66916098_66916734
Isoform_9289_4	chr11	+	1029	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	7	561	7	-39	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAGAAAATATAGAAA	3925	False	NA	NA	False	AATGAA	-7	NA	66915986	66925577	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
Isoform_9292_165	chr11	+	1752	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	660	0	-419	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTTTGCTTCTGTGAA	NA	False	NA	19	True	AATAAA	-31	NA	66943495	66955738	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
Isoform_9293_11	chr11	+	2382	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	19	11	19	-11	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGGTACTTACATGA	NA	False	NA	3	True	AATAAA	-21	NA	66943514	66956387	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
Isoform_9294_3	chr11	+	2280	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-17	149	-17	92	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGCTATCTCCTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	66943478	66956249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
Isoform_9298_11	chr11	+	4011	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17700	-86	17700	2	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235628	67262414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
Isoform_93_160	ERCC-00111	+	976	1	FSM	ERCC-00111A	DQ883685	978	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	978	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00111_+_0_1000
Isoform_9300_4	chr11	+	3226	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	228	-1513	138	-1	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAGTGGTAATTTGCTT	1351	False	NA	4	True	ATTAAA	-13	NA	67346144	67575799	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
Isoform_9301_3	chr11	+	3446	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	-6	-1499	-6	-15	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAAATGGGTGCTA	1117	False	NA	-10	True	NA	NA	NA	67345910	67575785	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
Isoform_9302_4	chr11	+	1508	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	-10	-1	1	1	multi-exon	FALSE	canonical	3	260	junction_1	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGGGGCCTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	67857295	67865418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_67857344_67860597_67860698_67864058
Isoform_9303_144	chr11	+	844	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	281	3269	5	109	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTACCTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	67857299	68094705	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
Isoform_9306_23	chr11	+	3131	23	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	163	26392	0	1	5prime_fragment	FALSE	canonical	3	123	junction_6	18.5285685156644	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGACCCTTTCCGTCT	NA	False	NA	27	True	NA	NA	NA	68582903	68681066	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930
Isoform_9310_3	chr11	+	4855	33	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	202	11826	5	-8213	5prime_fragment	TRUE	canonical	3	123	junction_6	22.6794923884994	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAGAAAAGAAGCGGCT	NA	False	NA	NA	False	NA	NA	NA	68582942	68695632	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452
Isoform_9311_2523	chr11	+	524	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	6	-4	6	4	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	2523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTGTGGTGTTTTCC	NA	False	NA	-33	True	ATTAAA	-18	NA	68792414	68795364	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
Isoform_9313_1379	chr11	+	552	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-26	0	-26	0	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	False	NA	33	True	ATTAAA	-14	NA	68792382	68795360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
Isoform_9316_72	chr11	+	672	4	NIC	ENSMUSG00000060938.15	novel	500	3	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	269	junction_1	7467.32754515741	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTTGTGTGGTGTTTT	NA	False	NA	35	True	ATTAAA	-16	NA	68792452	68795362	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68792639_68793095_68793269_68794004_68794146_68795190
Isoform_9322_7	chr11	+	1830	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTGTCTTATGTTTA	5556	False	NA	6	True	CATAAA	-18	NA	68858954	68863342	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
Isoform_9323_6	chr11	+	3908	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	97.1731967431825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5264	False	NA	18	True	AATAAA	-18	NA	68906914	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9325_59	chr11	+	3987	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	-9	0	2	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5263	False	NA	18	True	AATAAA	-18	NA	68906913	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9326_130	chr11	+	3963	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	15	0	15	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9328_151	chr11	+	3960	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	201	3	15	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9329_7	chr11	+	4140	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	21	3	6	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5107	False	NA	18	True	AATAAA	-18	NA	68906757	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_933_3	chr10	-	2161	6	ISM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	41143	5	-60	-5	3prime_fragment	FALSE	canonical	3	374	junction_5	15.8366663158633	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGCTTTGCTGATTG	2235	False	NA	-6	True	ATTAAA	-17	NA	61178166	61155439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097
Isoform_9330_10	chr11	+	3751	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	97.9944697407626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9331_6	chr11	+	3747	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	98.8413373914187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5288	False	NA	18	True	AATAAA	-18	NA	68906938	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9332_14	chr11	+	3946	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	27	3	16	0	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5288	False	NA	18	True	AATAAA	-18	NA	68906938	68927296	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9333_7	chr11	+	3940	23	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	95.0498890318062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
Isoform_9337_38	chr11	+	1798	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	32	1	8	-1	multi-exon	FALSE	canonical	3	35	junction_1	202.492592457107	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936504	68942489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_9338_35	chr11	+	2000	8	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	5	-4	intron_retention	FALSE	canonical	3	10	junction_1	225.027889427973	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATACTGTGGTGGTCTGA	NA	False	NA	12	True	AATAAA	-22	NA	68936482	68942486	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_68936835_68938551_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_9340_1320	chr11	+	1922	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	27	1	8	-1	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936504	68942489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_9342_126	chr11	+	1964	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	-15	1	-10	-1	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936462	68942489	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
Isoform_9350_5	chr11	+	984	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	13	266	11	3	multi-exon	FALSE	canonical	3	354	junction_2	22.0655588845805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGGCGTATACTATT	4665	False	NA	NA	False	AATAAA	-16	NA	68961649	68963853	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
Isoform_9351_76	chr11	+	737	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	42	0	-6	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4689	False	NA	NA	False	AATAAA	-19	NA	68961673	68963856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
Isoform_9352_18	chr11	+	824	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	-45	0	-45	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4602	False	NA	NA	False	AATAAA	-19	NA	68961586	68963856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
Isoform_9353_10	chr11	+	2167	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	38	0	6	0	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979353	68983210	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
Isoform_9354_19	chr11	+	3324	18	FSM	ENSMUSG00000020893.18	ENSMUST00000101004.9	3507	18	19	164	19	-2	multi-exon	FALSE	canonical	3	14	junction_5	5.21177798431451	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	10	True	AATAAA	-16	NA	68986061	68997120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
Isoform_9355_10	chr11	+	3312	18	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	5	3666	5	-2	5prime_fragment	FALSE	canonical	3	10	junction_1	5.84636047433339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	10	True	AATAAA	-16	NA	68989778	68997120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
Isoform_9356_3	chr11	+	2374	15	FSM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	56	1	56	-1	multi-exon	FALSE	canonical	0	0	junction_2	11.3227241259625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	1961	False	NA	6	True	AATAAA	-17	NA	69047870	69060617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69048220_69049099_69049305_69053493_69053576_69053718_69053812_69053946_69054070_69054333_69054438_69054752_69054926_69055157_69055302_69056676_69056881_69057055_69057143_69057599_69057770_69058181_69058304_69059603_69059705_69060043_69060215_69060371
Isoform_9357_3	chr11	+	587	4	ISM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	10420	1	10420	-1	3prime_fragment	FALSE	canonical	3	17	junction_3	8.17856276425687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	NA	False	NA	6	True	AATAAA	-17	NA	69058234	69060617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_69058304_69059603_69059705_69060043_69060215_69060371
Isoform_9358_43	chr11	+	744	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	7	0	7	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214812	69216619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
Isoform_9360_24	chr11	+	738	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	21	0	9	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214909	69216619	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
Isoform_9362_18	chr11	+	2494	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	38	6	38	-6	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	5	True	AATAAA	-14	NA	69217121	69223862	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
Isoform_9363_7	chr11	+	2088	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTGAAAGACTGTTATT	NA	False	NA	9	True	AATAAA	-18	NA	69231278	69233466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69231885_69231984
Isoform_9365_13	chr11	+	1745	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	335	1	-13	-1	multi-exon	FALSE	canonical	3	42	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTGAAAGACTGTTATT	NA	False	NA	9	True	AATAAA	-18	NA	69231621	69233466	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69231885_69231984
Isoform_9367_5	chr11	+	549	3	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	-17	-8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	615.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAAGTGGCCTGTGTCTGT	NA	False	NA	9	True	ATTAAA	-9	NA	69286295	69287498	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_69286508_69287002_69287187_69287345
Isoform_9368_95	chr11	+	496	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	170	5	3	-5	multi-exon	FALSE	canonical	3	948	junction_1	166	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCCTGTGTCTGTGTG	NA	False	NA	12	True	ATTAAA	-12	NA	69286642	69287501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69286799_69287002_69287187_69287345
Isoform_9369_53	chr11	+	388	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	11	5	11	-5	multi-exon	FALSE	canonical	3	1280	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCCTGTGTCTGTGTG	NA	False	NA	12	True	ATTAAA	-12	NA	69286954	69287501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69287187_69287345
Isoform_937_157	chr10	-	4059	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	170	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGCTTTGCTGATTG	NA	False	NA	-6	True	ATTAAA	-17	NA	61219139	61155439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_9376_183	chr11	+	1822	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	-2	2	1	-1	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69471228	69482697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
Isoform_9378_491	chr11	+	1726	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108658.10	1771	11	44	1	1	-1	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69471228	69482697	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_9379_334	chr11	+	1753	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	19	0	19	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471203	69482699	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_938_22	chr10	-	4195	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	34	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6294407231168	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGCTTTGCTGATTG	NA	False	NA	-6	True	ATTAAA	-17	NA	61219275	61155439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
Isoform_9385_15	chr11	+	2137	12	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	779.63500678308	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69471228	69482696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_69471342_69471879_69472292_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
Isoform_9388_1424	chr11	+	2991	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-40	0	-40	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523775	69544123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_9389_73	chr11	+	3102	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-151	0	-151	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523664	69544123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_9394_29	chr11	+	3142	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-191	0	-191	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523624	69544123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_9396_18	chr11	+	3157	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-40	0	intron_retention	FALSE	canonical	3	970	junction_6	97.2474506949497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523775	69544123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
Isoform_9405_31	chr11	+	1138	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-277	0	-277	0	multi-exon	FALSE	canonical	3	116	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCCCATTTGTAT	NA	False	NA	24	True	ATTAAA	-17	NA	69545862	69547553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69546726_69547278
Isoform_9407_62	chr11	+	383	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	38	0	-3	0	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729377	69730439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
Isoform_9408_416	chr11	+	459	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	28	5	-3	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729377	69730439	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
Isoform_9414_24	chr11	+	1740	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	24	1021	24	1	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTAGAAGCCGGATGTG	NA	False	NA	16	True	TATAAA	-16	NA	69737466	69741863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_9415_3	chr11	+	1875	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	7	903	7	112	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTAGTTTTCATCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	69737449	69741981	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_9416_3	chr11	+	2678	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	12	95	12	-95	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCCTCACCTCTACAAC	NA	False	NA	NA	False	CATAAA	-11	NA	69737454	69742789	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_9417_3	chr11	+	1956	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-46	17	13	-10	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTTTTAAACAGTAGA	NA	False	NA	5	True	TATAAA	-5	NA	69737455	69741852	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
Isoform_9419_47	chr11	+	1194	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-34	-1	-34	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4057	False	NA	12	True	AATAAA	-22	NA	69804841	69807417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
Isoform_942_41	chr10	-	2616	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-129	3297	-129	1032	multi-exon	FALSE	canonical	3	200	junction_2	2.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTGGGAAAACGTAAG	NA	False	NA	-17	True	ATTAAA	-22	NA	61288569	61267566	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61269608_61270696_61270883_61288180
Isoform_9421_13	chr11	+	1354	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-137	3	5	-2	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCATGCCTGAGTGCTGT	4096	False	NA	9	True	AATAAA	-19	NA	69804880	69807414	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
Isoform_9422_3	chr11	+	889	5	NIC	ENSMUSG00000018569.13	novel	1335	4	NA	NA	-77	-2	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	48.7493589701444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8666	False	NA	4	True	AATAAA	-14	NA	69856144	69858706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_69856193_69856710_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_9423_24	chr11	+	1331	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	-1	5	-1	-2	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8742	False	NA	4	True	AATAAA	-14	NA	69856220	69858706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_9424_24	chr11	+	1225	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	105	5	105	-2	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTTCCAGGCCG	8848	False	NA	4	True	AATAAA	-14	NA	69856326	69858706	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
Isoform_9429_15	chr11	+	1998	8	FSM	ENSMUSG00002075075.1_ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	-378	7	86	-7	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGCTGCCCTAGACC	NA	False	NA	NA	False	TTTAAA	-20	NA	69871603	69881420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
Isoform_9435_403	chr11	+	896	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	449	6	-47	5	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTTGCCCTGTGTCA	5177	False	NA	10	True	AATAAA	-20	NA	69882417	69885771	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
Isoform_9438_174	chr11	+	1933	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	73	0	-26	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2390	False	NA	16	True	AATAAA	-26	NA	69886675	69890835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
Isoform_9439_135	chr11	+	1989	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	17	0	17	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2334	False	NA	16	True	AATAAA	-26	NA	69886619	69890835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
Isoform_9440_65	chr11	+	1787	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	-6	225	-6	19	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCCGTTTACTT	2311	False	NA	25	True	TATAAA	-35	NA	69886596	69890610	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
Isoform_9443_26	chr11	+	1746	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-41	1	-41	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	2375	False	NA	15	True	AATAAA	-25	NA	69886660	69890834	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
Isoform_9444_12	chr11	+	1811	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-105	0	-6	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2311	False	NA	16	True	AATAAA	-26	NA	69886596	69890835	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
Isoform_9448_973	chr11	+	2969	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	0	-1	0	1	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAAGCCTCTGGCTCCT	7135	False	NA	13	True	AATAAA	-17	NA	69891420	69900938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
Isoform_945_8	chr10	-	2390	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	-198	-17	-198	17	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATAGCCCTTTATTGC	NA	False	NA	-9	True	NA	NA	NA	61620124	61574426	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_9451_22	chr11	+	3071	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-102	-1	-102	1	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAAGCCTCTGGCTCCT	7033	False	NA	13	True	AATAAA	-17	NA	69891318	69900938	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
Isoform_9456_4	chr11	+	1013	5	FSM	ENSMUSG00000040963.16	ENSMUST00000179757.2	672	5	-12	-329	-12	-2	multi-exon	FALSE	canonical	3	41	junction_2	4.49305018890286	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGTGTAGCCTGGTTGT	6978	False	NA	NA	False	AAAAAG	-13	NA	69988505	69997011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
Isoform_9457_3	chr11	+	978	3	ISM	ENSMUSG00000040950.14	ENSMUST00000108584.2	1307	8	1967	-2	1967	2	3prime_fragment	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAGAAATATAGG	131	False	NA	NA	False	NA	NA	NA	70026965	70028123	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_70027164_70027266_70027419_70027495
Isoform_9458_5	chr11	+	1790	15	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	84.118842073799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323471	70331496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_946_342	chr10	-	1992	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	208	-25	208	25	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATTGCGATATTTT	NA	False	NA	-1	True	NA	NA	NA	61619718	61574418	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_9460_3	chr11	+	2106	13	ISM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	1	4	1	-4	intron_retention	FALSE	canonical	3	232	junction_1	16.6506172725084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323463	70331496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487
Isoform_9461_24	chr11	+	1777	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	1	-1	1	1	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323463	70331501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_9462_4	chr11	+	1889	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	-111	-1	-109	1	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323351	70331501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_9463_3	chr11	+	1923	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	6	-152	-2	-2	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTGGCTTGGTCTGT	NA	False	NA	40	True	NA	NA	NA	70323468	70331652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
Isoform_9464_4	chr11	+	1999	14	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	71.862459029395	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323460	70331496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330677
Isoform_9465_4	chr11	+	1889	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-15	-26	1	-3	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323463	70331646	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9466_70	chr11	+	1735	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-6	119	2	1	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323472	70331501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9468_10	chr11	+	1855	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-126	119	-108	1	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323352	70331501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9469_4	chr11	+	1887	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-6	-33	2	-1	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTTGGCTTGGTCTGTG	NA	False	NA	41	True	NA	NA	NA	70323472	70331653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9470_3	chr11	+	1958	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-209	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	69.2497697631183	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGTGTTCTGTCAG	NA	False	NA	18	True	AATAAA	-18	NA	70323251	70331504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330677_70330732_70330989
Isoform_9471_6	chr11	+	2031	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	4	1	intron_retention	FALSE	canonical	3	204	junction_12	20.8457280683171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323466	70331501	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9472_4	chr11	+	2286	13	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	204	junction_11	20.0762435618707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323466	70331500	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9473_5	chr11	+	1708	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	69.6723523816336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGTGTTCTGTCAG	NA	False	NA	18	True	AATAAA	-18	NA	70323471	70331504	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9474_3	chr11	+	1814	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	-103	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	69.6723523816336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323357	70331496	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
Isoform_9476_121	chr11	+	901	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	-1	2	-1	-2	multi-exon	FALSE	canonical	3	117	junction_2	11	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAAGAGTCTCTCTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	70342743	70344551	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70342890_70343033_70343165_70343927
Isoform_9477_14	chr11	+	1004	2	FSM	ENSMUSG00000018923.14	ENSMUST00000152348.2	870	2	31	-165	31	2	multi-exon	FALSE	canonical	3	117	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCTCTCTCTCGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	70342788	70344555	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70343165_70343927
Isoform_9478_1547	chr11	+	814	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-18	2	1	-2	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACGTTTCTGTGTGAA	NA	False	NA	21	True	AATAAA	-11	NA	70416193	70418473	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
Isoform_9480_87	chr11	+	1023	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-15	-210	4	1	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTCTGCCTGCATG	NA	False	NA	18	True	AATAAA	-19	NA	70416196	70418685	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
Isoform_9487_5	chr11	+	3495	25	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	6.19755776271768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70430889	70448936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_9488_15	chr11	+	3686	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-27	0	-27	0	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431104	70448936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_9489_3	chr11	+	3572	24	NIC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	-63	0	intron_retention	TRUE	canonical	2	6	junction_9	5.25817394108515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431068	70448936	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
Isoform_9490_9	chr11	+	4984	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	22.8920701335637	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1477	False	NA	NA	False	AATAAA	-21	NA	70453717	70505306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_9492_7	chr11	+	4998	32	FSM	ENSMUSG00000020827.19	ENSMUST00000072873.14	4610	32	-38	-350	-29	0	multi-exon	TRUE	canonical	3	41	junction_20	18.9436427990342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1437	False	NA	NA	False	AATAAA	-19	NA	70453677	70505304	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_9493_3	chr11	+	4900	32	FSM	ENSMUSG00000020827.19	ENSMUST00000102559.11	4865	32	-36	1	-19	-1	multi-exon	FALSE	canonical	3	21	junction_17	25.4119032798382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATTTTGAGATCCTAC	1447	False	NA	NA	False	AATAAA	-18	NA	70453687	70505303	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_9494_5	chr11	+	4876	31	FSM	ENSMUSG00000020827.19	ENSMUST00000102558.11	3903	31	-205	-768	-16	2	multi-exon	FALSE	canonical	3	21	junction_17	21.9476397111145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1450	False	NA	NA	False	AATAAA	-21	NA	70453690	70505306	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
Isoform_9496_7	chr11	+	2007	10	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	216.219767029569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9190	False	NA	19	True	AATAAA	-20	NA	70538112	70542236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70538779_70538854_70538936_70539233_70539419_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_9497_10	chr11	+	1770	9	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_3	157.209205757805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9190	False	NA	19	True	AATAAA	-20	NA	70538112	70542236	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70538779_70538854_70538936_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_9499_20	chr11	+	1902	8	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	8	0	1	intron_retention	FALSE	canonical	3	485	junction_5	20.0173394223863	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9190	False	NA	22	True	AATAAA	-23	NA	70538112	70542239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
Isoform_950_37	chr10	-	2287	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	-89	-23	-89	23	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTTATTGCGATATT	NA	False	NA	-3	True	NA	NA	NA	61620015	61574420	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_9501_263	chr11	+	1825	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	8	0	1	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9190	False	NA	22	True	AATAAA	-23	NA	70538112	70542239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_9502_15	chr11	+	1887	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-62	8	-10	1	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTAAGATCAT	9128	False	NA	22	True	AATAAA	-23	NA	70538050	70542239	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_9506_5	chr11	+	1965	8	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	525	junction_7	8.51649060616507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGATGAAAAAAAAAGGTT	9188	False	NA	14	True	AATAAA	-15	NA	70538110	70542231	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
Isoform_9507_8	chr11	+	1564	12	FSM	ENSMUSG00000060600.16	ENSMUST00000108548.8	1564	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.1466718079752	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7115	False	NA	13	True	AATAAA	-16	NA	70548029	70553339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70548094_70548585_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_9508_27	chr11	+	1452	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	2	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7115	False	NA	13	True	AATAAA	-16	NA	70548029	70553339	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_9509_3	chr11	+	1457	12	NIC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	18.9020966085339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGACCATGCTGTGTTC	7115	False	NA	6	True	AATAAA	-9	NA	70548029	70553332	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70548106_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
Isoform_9510_7	chr11	+	1796	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	260	5	260	-5	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCCTCCTCTGGCCTT	130	False	NA	13	True	ATTAAA	-21	NA	70655294	70663749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70655376_70662034
Isoform_9512_11	chr11	+	1297	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	-33	0	-19	0	multi-exon	FALSE	canonical	3	143	junction_4	19.8179211826064	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCCCTCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	70735584	70784947	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
Isoform_9517_3	chr11	+	5424	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-19	3	-19	-3	multi-exon	TRUE	canonical	3	115	junction_10	23.0000752217816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTGAATAAATAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	70735584	70833928	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
Isoform_9518_6	chr11	+	3602	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	3	1803	-1	-1	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTACACATGTATAAATCT	NA	False	NA	11	True	AATAAA	-20	NA	70735606	70832128	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
Isoform_9519_142	chr11	+	809	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	284	7	6	-7	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTCAACTTTCCT	NA	False	NA	38	True	ATTAAA	-39	NA	70861322	70868652	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
Isoform_952_5	chr10	-	2928	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	-3546	-11	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	99.4508377833111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAAGCTCCAGCG	NA	False	NA	-37	True	NA	NA	NA	61623472	61574454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561_61620556_61623337
Isoform_9520_8	chr11	+	931	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	259	-90	-8	90	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCCAAAGGAATAG	NA	False	NA	135	True	AATAAA	-13	NA	70861297	70868749	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
Isoform_9521_5	chr11	+	683	7	FSM	ENSMUSG00000018449.13	ENSMUST00000178822.8	566	7	-1	-116	-1	2	multi-exon	FALSE	canonical	3	5	junction_5	117.134419459962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861331	70868629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865819_70865867_70868483
Isoform_9522_3	chr11	+	648	6	FSM	ENSMUSG00000018449.13	ENSMUST00000167509.2	519	6	-13	-116	3	2	multi-exon	FALSE	canonical	3	23	junction_5	118.829962551538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861319	70868629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70868483
Isoform_9523_3	chr11	+	1859	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTGGTGTTCTGATG	NA	False	NA	13	True	ATTAAA	-14	NA	70861014	70868627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
Isoform_9524_29	chr11	+	1556	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	3	2	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861319	70868629	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
Isoform_9525_8	chr11	+	676	6	FSM	ENSMUSG00000018449.13	ENSMUST00000171254.8	548	6	-13	-115	3	1	multi-exon	FALSE	canonical	3	39	junction_3	115.373480488369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861319	70868628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70865725_70865867_70868483
Isoform_9526_9	chr11	+	1440	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	6	1	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861322	70868628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
Isoform_9527_7	chr11	+	490	4	FSM	ENSMUSG00000018449.13	ENSMUST00000169965.8	343	4	-32	-115	-5	1	multi-exon	FALSE	canonical	3	26	junction_3	151.702193641211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861300	70868628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70868483
Isoform_9528_9	chr11	+	2455	4	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	300	junction_3	33.0689515339624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861300	70868628	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_70861414_70862589_70862761_70863840_70865867_70868483
Isoform_9529_10	chr11	+	2543	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	-22	-2177	-22	-16	multi-exon	FALSE	canonical	3	36	junction_1	44	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACTTCAGTATTTA	NA	False	NA	0	True	AATAAA	-21	NA	70910414	70918181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70910550_70915375_70915538_70915935
Isoform_953_7	chr10	-	2017	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	207	-11	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	124.934649583959	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAAGCTCCAGCG	NA	False	NA	-37	True	NA	NA	NA	61619719	61574454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr10_-_61575242_61576154_61576215_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
Isoform_9531_17	chr11	+	2987	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	0	16	0	-16	multi-exon	FALSE	canonical	3	76	junction_1	24	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACTTCAGTATTTA	NA	False	NA	0	True	AATAAA	-21	NA	70910436	70918181	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_70911016_70915375_70915538_70915935
Isoform_9533_40	chr11	+	2864	9	FSM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	0	2	0	-2	multi-exon	FALSE	canonical	3	7	junction_4	2.29128784747792	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGTCTCTGCCTCT	NA	False	NA	17	True	CATAAA	-30	NA	71641805	71680471	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
Isoform_9535_146	chr11	+	1504	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	11	-2	11	2	multi-exon	FALSE	canonical	0	0	junction_3	92.1316449435263	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTTTTAGATATCTAT	NA	False	NA	16	True	AATAAA	-20	NA	71933291	71938198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
Isoform_9536_9	chr11	+	1923	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	11	1	intron_retention	FALSE	canonical	3	210	junction_4	14.6116391962025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTTTTTAGATATCTA	NA	False	NA	15	True	AATAAA	-19	NA	71933291	71938197	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_71933361_71933842_71934164_71935806_71936601_71937165_71937220_71937512
Isoform_9537_5	chr11	+	1225	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	3	-7	combination_of_known_junctions	TRUE	canonical	3	37	junction_2	82.8930033235616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGGCATGTTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	71933283	71938189	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_71933361_71933842_71934164_71936504_71936601_71937165_71937220_71937512
Isoform_9540_864	chr11	+	733	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	12	236	12	-236	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAACCATTAAGTTTT	NA	False	NA	8	True	AATAAA	-8	NA	72098384	72100605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
Isoform_9544_15	chr11	+	667	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	2	-236	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	739	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAACCATTAAGTTTT	NA	False	NA	8	True	AATAAA	-8	NA	72098374	72100605	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_72098595_72099078_72099161_72100240
Isoform_9545_6	chr11	+	2107	4	FSM	ENSMUSG00000040471.18	ENSMUST00000076443.10	1818	4	-286	-3	-286	3	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTCTGAGTGCCACT	NA	False	NA	NA	False	AATAAA	-17	NA	72326065	72329229	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72326591_72327264_72327468_72327544_72327659_72327964
Isoform_955_5	chr10	-	2727	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	-263	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGTCTGTGCGTCTGC	NA	False	NA	NA	False	TATAAA	-16	NA	61814909	61674277	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
Isoform_9552_835	chr11	+	4125	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	15	218	-7	-218	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332195	72342376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
Isoform_9554_110	chr11	+	4161	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-21	218	-21	-218	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332159	72342376	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
Isoform_956_52	chr10	-	1170	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	43	556	6	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGGTGAATGACTGA	NA	False	NA	-11	True	AATAAA	-20	NA	61946786	61943989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
Isoform_957_23	chr10	-	1097	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	37	1	0	-1	multi-exon	FALSE	canonical	3	38	junction_2	41.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGGTGAATGACTGA	NA	False	NA	-11	True	AATAAA	-20	NA	61946792	61943989	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_61944903_61945662_61945792_61946737
Isoform_958_162	chr10	-	1652	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	27	1959	27	354	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4903	False	NA	0	True	AATAAA	-27	NA	62067003	62023133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_9587_30	chr11	+	3847	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-32	0	-32	0	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498076	72577307	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_9588_208	chr11	+	1977	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-32	1870	-32	-1870	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAAGTTGTTGGCTTT	NA	False	NA	NA	False	AATATA	-15	NA	72498076	72575437	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_959_3	chr10	-	3139	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	23	476	23	-476	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAACAGAATGACCC	4899	False	NA	NA	False	NA	NA	NA	62067007	62021650	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_9598_6	chr11	+	2063	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-15	-1873	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTCAAGTTGTTGGC	NA	False	NA	NA	False	AATATA	-12	NA	72498093	72575434	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
Isoform_9599_3	chr11	+	4002	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	4028	0	365	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCAAGTCTTTTCTTT	NA	False	NA	3	True	CATAAA	-16	NA	72580831	72658944	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
Isoform_960_45	chr10	-	1695	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-16	1959	-16	354	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4860	False	NA	0	True	AATAAA	-27	NA	62067046	62023133	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
Isoform_9601_8	chr11	+	3713	15	ISM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	14076	6	-6852	-6	3prime_fragment	FALSE	canonical	3	82	junction_14	12.4533824599535	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGCTGGTAGTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	72866070	72883863	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
Isoform_9602_15	chr11	+	3463	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	-48	9	-13	2	multi-exon	FALSE	canonical	2	15	junction_1	5.11815939137846	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTTTGTATG	NA	False	NA	NA	False	AATAAA	-20	NA	72909820	72932890	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
Isoform_9605_107	chr11	+	2757	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	88	9261	1	-9261	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAAAGGAGTGTCATT	NA	False	NA	17	True	AATATA	-22	NA	72938696	72970882	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
Isoform_9606_20	chr11	+	2911	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	95	9100	5	-9100	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGTCTCTGACTTA	NA	False	NA	11	True	NA	NA	NA	72938703	72971043	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
Isoform_9609_6	chr11	+	808	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47831	-11	47831	11	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACATAGTCCTTATT	NA	False	NA	20	True	ATTAAA	-29	NA	73029239	73038283	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
Isoform_9611_4	chr11	+	2564	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	-175	6	-175	-6	multi-exon	FALSE	canonical	2	4	junction_5	3.62476052848859	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTTTCTGACCTGT	3193	False	NA	6	True	GATAAA	-16	NA	73051071	73063505	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
Isoform_9612_143	chr11	+	1250	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	168	105	0	0	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTTTCTGTTAGATG	4376	False	NA	NA	False	AATAAA	-16	NA	73068076	73072873	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
Isoform_9613_23	chr11	+	2805	7	FSM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	0	3	0	-3	multi-exon	TRUE	canonical	0	0	junction_6	1.34370962471642	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCCCTTTGATGAACACA	4992	False	NA	NA	False	AATAAA	-19	NA	73090285	73115334	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_73090507_73094747_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
Isoform_9614_3	chr11	+	2694	6	ISM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	4345	10	4345	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTTTATCCCTTTGAT	4052	False	NA	NA	False	AATAAA	-12	NA	73094630	73115327	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
Isoform_9615_32	chr11	+	5395	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-17	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_12	69.5319897601097	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCAGCCTTTCCTGTG	NA	False	NA	25	True	AATAAA	-19	NA	74540323	74561672	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_9616_4	chr11	+	4473	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-39	945	-19	-3	multi-exon	TRUE	canonical	0	0	junction_12	69.5319897601097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGATGTGTGTGTGTGTC	NA	False	NA	59	True	NA	NA	NA	74540301	74560728	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_9618_4	chr11	+	5402	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	82.5694955779675	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540314	74561673	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
Isoform_9620_5	chr11	+	1343	2	ISM	ENSMUSG00000010554.15	ENSMUST00000010698.13	2073	11	9	43176	9	1097	5prime_fragment	FALSE	canonical	3	401	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAACAAAAAAG	8503	False	NA	NA	False	NA	NA	NA	74661664	74665544	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_74661811_74664347
Isoform_9621_6	chr11	+	2807	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	5	793	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8499	False	NA	97	True	AATATA	-15	NA	74661660	74709513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
Isoform_9627_55	chr11	+	2714	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	33	9837	33	794	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATCCTGTTTGA	8527	False	NA	98	True	AATATA	-16	NA	74661688	74709514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
Isoform_9628_52	chr11	+	1935	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	9	10640	9	-9	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCATATTATA	8503	False	NA	NA	False	NA	NA	NA	74661664	74708711	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
Isoform_963_15	chr10	-	3703	19	NIC	ENSMUSG00000037012.19	novel	3639	20	NA	NA	393	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	146.937964570423	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCGGAGTGGTGTTTCCT	NA	False	NA	-5	True	AGTAAA	-17	NA	62175928	62104884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_9631_8	chr11	+	3301	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-85	1374	-85	576	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGTCAGACACTCAG	NA	False	NA	8	True	NA	NA	NA	74721660	74735177	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
Isoform_9632_19	chr11	+	4596	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGCATCTGGGTCA	NA	False	NA	40	True	AATAAA	-31	NA	74721738	74736550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
Isoform_964_720	chr10	-	3627	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	399	252	399	1	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGGAGTGGTGTTTCC	NA	False	NA	-6	True	AGTAAA	-16	NA	62175922	62104885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_9641_276	chr11	+	3370	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	16	3	-4	-3	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTGTCTGGATTCTA	NA	False	NA	23	True	AATAAA	-15	NA	74788919	74800165	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
Isoform_9645_13	chr11	+	5860	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-19	7	-19	-7	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATTGACCTCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	74816629	75055267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
Isoform_9646_4	chr11	+	3270	12	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	41.9042592363683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATTGACCTCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	74816649	75055267	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_74816830_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
Isoform_965_73	chr10	-	3687	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	339	252	339	1	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGGAGTGGTGTTTCC	NA	False	NA	-6	True	AGTAAA	-16	NA	62175982	62104885	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_9650_8	chr11	+	3453	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	46	18	-16	-18	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTGGGATGGCAA	NA	False	NA	17	True	AATAAA	-19	NA	75239304	75296513	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
Isoform_9656_5	chr11	+	1670	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	94	-12	-11	12	multi-exon	FALSE	canonical	3	9	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTCTTTTATGAGTGTT	3932	False	NA	20	True	AATAAA	-31	NA	75352458	75357514	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75352582_75354518_75354684_75356132
Isoform_9657_4	chr11	+	4487	25	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	7854	2	2428	0	3prime_fragment	FALSE	canonical	3	297	junction_1	122.890957763377	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75385499	75400273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
Isoform_9658_4	chr11	+	4286	24	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	8422	2	2996	0	3prime_fragment	FALSE	canonical	3	360	junction_2	116.35265148894	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75386067	75400273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
Isoform_9659_6	chr11	+	3855	22	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	9221	3	3795	-1	3prime_fragment	FALSE	canonical	3	371	junction_2	110.250755212576	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTTCTTGCTGTT	NA	False	NA	17	True	AATAAA	-14	NA	75386866	75400272	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
Isoform_966_11	chr10	-	3904	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	377	-3	377	3	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTCAGACAAGGGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	62175944	62104630	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
Isoform_9666_18	chr11	+	2865	11	FSM	ENSMUSG00000038188.18	ENSMUST00000042808.13	2887	11	15	7	14	-3	multi-exon	FALSE	canonical	1	3	junction_9	2.37697286480094	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAATTAATTAATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	75404380	75417401	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414723_75414816_75414964_75416195
Isoform_9667_8	chr11	+	3121	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	23	92	-22	-92	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	6898	False	NA	29	True	AATAAA	-32	NA	75422546	75464617	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_9668_7	chr11	+	3160	14	NIC	ENSMUSG00000038178.17	novel	3236	14	NA	NA	-16	-91	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	10.1858470089601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGTATCAGCTAATTACT	6904	False	NA	30	True	AATAAA	-33	NA	75422552	75464618	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75422649_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_9669_6	chr11	+	3260	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	103	3782	77	-95	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCACGTATCAGCTAAT	7392	False	NA	26	True	AATAAA	-29	NA	75423040	75464614	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_9670_3	chr11	+	3372	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	-8	3781	-8	-94	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGTATCAGCTAATT	7281	False	NA	27	True	AATAAA	-30	NA	75422929	75464615	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
Isoform_9671_20	chr11	+	3582	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-1	-146	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTCTAGCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	75478921	75519458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_9672_216	chr11	+	1677	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGCATCTCTGGTTAA	NA	False	NA	8	True	AATAAA	-15	NA	75478921	75517553	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_9675_8	chr11	+	3705	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	17	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTCACTTACAGTATG	NA	False	NA	NA	False	AATAAA	-15	NA	75478961	75519621	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
Isoform_9676_121	chr11	+	2650	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	23	6	-18	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5462	False	NA	21	True	TATAAA	-12	NA	75521836	75539691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_9677_10	chr11	+	2677	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	-4	6	-4	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5435	False	NA	21	True	TATAAA	-12	NA	75521809	75539691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_9681_3	chr11	+	2816	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	-143	6	-143	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5296	False	NA	21	True	TATAAA	-12	NA	75521670	75539691	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_9682_3	chr11	+	2648	12	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	44.0495588668449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTCGTGTGACTCCT	5474	False	NA	19	True	TATAAA	-10	NA	75521848	75539689	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537762_75538018_75538103_75538227_75538333_75538477
Isoform_9683_5	chr11	+	3214	11	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	99	junction_5	23.4682764599363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTGACTCCTTTGATGG	5462	False	NA	26	True	TATAAA	-17	NA	75521836	75539696	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
Isoform_9684_6	chr11	+	4548	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	-2	1	-2	-1	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTTCCTGTGAGTG	8841	False	NA	14	True	AATAAA	-18	NA	75542333	75564735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_9685_4	chr11	+	4576	32	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-137	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	69.2567498410313	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACAGTCTTCCTGTGA	NA	False	NA	11	True	AATAAA	-15	NA	75546837	75564732	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562701_75562783_75562882_75562977_75563078_75563435
Isoform_9686_5	chr11	+	4463	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	256	-1	-20	-1	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTTCCTGTGAGTG	NA	False	NA	14	True	AATAAA	-18	NA	75546954	75564735	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
Isoform_9687_5	chr11	+	1167	2	ISM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	-23	7803	4	-7751	5prime_fragment	FALSE	canonical	3	466	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGGAATTAACTTGAAG	2127	False	NA	NA	False	ACTAAA	-21	NA	75570113	75583812	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_75570491_75583022
Isoform_9688_11	chr11	+	1010	3	FSM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	-36	-9	-9	9	multi-exon	FALSE	canonical	3	19	junction_2	223.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAGGATACC	2114	False	NA	NA	False	NA	NA	NA	75570100	75591624	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75570491_75583022_75583389_75591370
Isoform_969_6	chr10	-	2428	15	NIC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	88.9503702485096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACTATCTGGTTTGTT	NA	False	NA	18	True	NA	NA	NA	62285496	62265116	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62265588_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_9691_148	chr11	+	3430	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	20	840	-7	3	multi-exon	FALSE	canonical	3	229	junction_2	118.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2143	False	NA	13	True	NA	NA	NA	75570129	75596894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75570491_75583022_75583389_75594191
Isoform_9693_9	chr11	+	3527	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	-77	840	-52	3	multi-exon	FALSE	canonical	3	229	junction_2	118.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2046	False	NA	13	True	NA	NA	NA	75570032	75596894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75570491_75583022_75583389_75594191
Isoform_9696_124	chr11	+	3600	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	45	-3	-7	3	multi-exon	FALSE	canonical	3	225	junction_2	120.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2143	False	NA	13	True	NA	NA	NA	75570129	75596894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75570491_75583022_75583559_75594191
Isoform_9697_5	chr11	+	3718	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	-73	-3	-73	3	multi-exon	FALSE	canonical	3	225	junction_2	120.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGGCTTGGTGATCT	2025	False	NA	13	True	NA	NA	NA	75570011	75596894	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75570491_75583022_75583559_75594191
Isoform_97_43	ERCC-00112	+	1118	1	FSM	ERCC-00112A	DQ459422	1120	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1120	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00112_+_0_1100
Isoform_9704_1963	chr11	+	1782	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	49	269	5	-269	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCATGCCTCCATCC	3040	False	NA	14	True	NA	NA	NA	75623743	75656402	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
Isoform_9705_504	chr11	+	2048	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	47	5	3	-5	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGGTGTAACTATGGAT	3038	False	NA	21	True	ATTAAA	-17	NA	75623741	75656666	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
Isoform_971_51	chr10	-	2586	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	18	0	18	0	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTTGTAATTGCCTT	NA	False	NA	95	True	AATAGA	-18	NA	62285499	62264987	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_9715_32	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3405	False	NA	NA	False	ATTAAA	-16	NA	76092839	76100241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
Isoform_9717_5	chr11	+	1927	4	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	24.0739601136904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3406	False	NA	NA	False	ATTAAA	-16	NA	76092840	76100241	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_76093082_76093377_76093462_76097953_76098050_76098735
Isoform_9718_3	chr11	+	537	2	FSM	ENSMUSG00000038057.5	ENSMUST00000040806.5	581	2	46	-2	46	2	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGTCTGTGGCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	76108479	76109494	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76108575_76109052
Isoform_9719_10	chr11	+	810	3	ISM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	34	3046	13	2689	5prime_fragment	FALSE	canonical	3	128	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTGTACATGTGTATG	584	False	NA	NA	False	NA	NA	NA	76134574	76138399	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_76134913_76135104_76135350_76138172
Isoform_972_310	chr10	-	2416	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	19	169	19	-38	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACACGGCATTCTCTGCC	NA	False	NA	-22	True	AATAAA	-20	NA	62285498	62265156	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_9720_117	chr11	+	1475	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	35	0	14	0	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	585	False	NA	23	True	ATTAAA	-31	NA	76134575	76141445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
Isoform_9721_5	chr11	+	1669	3	NIC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	136	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	583	False	NA	23	True	ATTAAA	-31	NA	76134573	76141445	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_76135350_76138172_76138341_76140720
Isoform_9722_16	chr11	+	2202	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	47	568	-1	-568	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTGTCTTCTTAGGA	NA	False	NA	NA	False	NA	NA	NA	76298015	76306550	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
Isoform_9723_106	chr11	+	1050	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	47	1720	-1	243	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	17	True	AGTAAA	-27	NA	76298015	76305398	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
Isoform_9725_5	chr11	+	866	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	-9	-495	-9	248	multi-exon	FALSE	canonical	3	21	junction_1	125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTATCTTTGCTGTCCT	NA	False	NA	22	True	AGTAAA	-32	NA	76298007	76305403	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76298269_76301952_76302026_76304871
Isoform_9728_516	chr11	+	2233	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	262	2	27	-2	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836591	76878203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
Isoform_9729_37	chr11	+	2341	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	154	2	-71	-2	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836483	76878203	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
Isoform_973_115	chr10	-	2446	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	35	123	-20	8	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTGTTTGTTTG	NA	False	NA	24	True	NA	NA	NA	62285482	62265110	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
Isoform_9734_6	chr11	+	3553	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-97	20	-88	-20	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384299	77398592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
Isoform_9735_4	chr11	+	3507	20	NNC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	-221	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.985143668506	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384166	77398592	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_77384178_77384356_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
Isoform_9739_4	chr11	+	1026	2	ISM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-16	20543	-16	278	5prime_fragment	FALSE	canonical	3	165	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGATGATCGGCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	77576964	77583024	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_77577334_77582367
Isoform_9743_5	chr11	+	6020	39	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	-5	1250	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	16.384934131146	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAGAATAAACTGT	NA	False	NA	12	True	NA	NA	NA	77654121	77745530	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503
Isoform_9744_3	chr11	+	1792	4	ISM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	-18	15919	-18	-15666	5prime_fragment	FALSE	canonical	3	95	junction_1	16.7531091641721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAATAAATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77873561	77901121	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226
Isoform_9747_3	chr11	+	2425	7	ISM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	-24	7276	-24	-7023	5prime_fragment	FALSE	canonical	3	95	junction_1	16.3986788085707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTGCAGCTGGGTG	NA	False	NA	NA	False	AAAAAG	-6	NA	77873555	77909764	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890
Isoform_9749_33	chr11	+	3120	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-66	4323	-18	2	5prime_fragment	FALSE	canonical	3	95	junction_1	13.3356664625357	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGGAGTTTGCCATAA	NA	False	NA	NA	False	GATAAA	-16	NA	77873561	77917042	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
Isoform_9751_53	chr11	+	4471	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-66	5	-18	-5	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTCTGCCTGTC	NA	False	NA	13	True	TATAAA	-17	NA	77873561	77921360	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
Isoform_9756_46	chr11	+	1736	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	39	4	-30	-2	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	1	True	AATAAA	-13	NA	77923144	77928688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_9757_31	chr11	+	1766	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	9	4	9	-2	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	1	True	AATAAA	-13	NA	77923114	77928688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_9758_13	chr11	+	1841	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	-52	2	20	-2	multi-exon	FALSE	canonical	3	86	junction_3	4.08248290463863	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTCTGGCTCCCGCC	NA	False	NA	1	True	AATAAA	-13	NA	77923125	77928688	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
Isoform_9759_21	chr11	+	2694	12	FSM	ENSMUSG00000061981.15	ENSMUST00000100784.9	2699	12	8	-3	8	0	multi-exon	FALSE	canonical	3	22	junction_2	138.547303733782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928774	77951260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
Isoform_9760_9	chr11	+	2672	10	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	48	1	-5	-1	intron_retention	FALSE	canonical	3	351	junction_3	24.7346410755402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77928804	77951259	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770
Isoform_9761_567	chr11	+	2576	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	45	0	-8	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928801	77951260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
Isoform_9763_69	chr11	+	2585	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	30	643	-18	-18	multi-exon	FALSE	canonical	3	80	junction_2	31	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTTTGAAAAAAAAAA	2628	False	NA	NA	False	ATTAAA	-8	NA	77985515	78046883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_9764_12	chr11	+	3219	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	30	9	-18	-9	multi-exon	FALSE	canonical	3	80	junction_2	31	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGAAAAATGCC	2628	False	NA	-7	True	TTTAAA	-39	NA	77985515	78047517	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_9765_3	chr11	+	3303	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	15	-60	15	60	multi-exon	FALSE	canonical	3	80	junction_2	31	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTGTCTGAGCACTG	2613	False	NA	62	True	NA	NA	NA	77985500	78047586	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044522
Isoform_9766_17	chr11	+	3098	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	-607	-18	-18	multi-exon	FALSE	canonical	3	49	junction_2	46.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGGAAAAAAAAAAGG	2628	False	NA	-16	True	TTTAAA	-30	NA	77985515	78047508	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_9767_85	chr11	+	2473	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	18	-18	-18	multi-exon	FALSE	canonical	3	49	junction_2	46.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTTTGAAAAAAAAAA	2628	False	NA	NA	False	ATTAAA	-8	NA	77985515	78046883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_9769_3	chr11	+	3166	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	-675	-18	50	multi-exon	FALSE	canonical	3	49	junction_2	46.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTGTTTCCTTGCTGT	2628	False	NA	52	True	NA	NA	NA	77985515	78047576	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_77985618_78033918_78034041_78044634
Isoform_9770_4	chr11	+	2621	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTTTAAAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	78006423	78046893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_78006664_78033918_78034041_78044634
Isoform_9771_8	chr11	+	1007	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTCTGAAGTCCTGTT	NA	False	NA	NA	False	AAAACA	-8	NA	78068938	78071305	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
Isoform_9772_3	chr11	+	781	3	FSM	ENSMUSG00000019437.18	ENSMUST00000108338.2	714	3	-56	-11	21	11	multi-exon	FALSE	canonical	3	157	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTCCGACTGATATGA	NA	False	NA	NA	False	AATAAA	-29	NA	78069531	78070712	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78069883_78070195_78070279_78070365
Isoform_9773_37	chr11	+	1062	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	15	335	15	5	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	AATGAA	-6	NA	78069525	78071311	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_9774_13	chr11	+	1359	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	6	47	6	-47	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCATGGGGACTGCATCA	NA	False	NA	5	True	AATAAA	-17	NA	78069516	78071599	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_9775_5	chr11	+	3094	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	30	-1712	-16	623	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	78069540	78073358	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
Isoform_9776_69	chr11	+	1332	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	36	0	26	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6061	False	NA	21	True	ATTAAA	-15	NA	78079291	78083014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_9777_9	chr11	+	1442	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	-69	-5	-69	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	5956	False	NA	26	True	ATTAAA	-20	NA	78079186	78083019	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_9779_42	chr11	+	1686	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	2	-3	2	-2	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTCTTTAAAGATT	6376	False	NA	24	True	ATTAAA	-18	NA	78079606	78083017	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
Isoform_9782_125	chr11	+	995	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	245	28	245	-28	multi-exon	FALSE	canonical	3	217	junction_1	4	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAAGACT	NA	False	NA	-9	True	NA	NA	NA	78136816	78146294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78136997_78141841_78142039_78145676
Isoform_9784_20	chr11	+	1258	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	-18	28	-18	-28	multi-exon	FALSE	canonical	3	217	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAAGACT	NA	False	NA	-9	True	NA	NA	NA	78136553	78146294	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78136997_78141841_78142039_78145676
Isoform_9788_3	chr11	+	2274	15	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	18	20713	18	1730	5prime_fragment	FALSE	canonical	3	514	junction_1	41.813543846218	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGCAGCTGTACCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	78152595	78160736	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313
Isoform_9789_6	chr11	+	2930	16	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-11	18489	-11	-1290	5prime_fragment	FALSE	canonical	3	514	junction_1	41.7727183697686	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAATCTACATC	NA	False	NA	NA	False	NA	NA	NA	78152566	78162960	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116
Isoform_979_427	chr10	-	2537	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	57	3	-2	-3	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAACTTAAGTTTGTA	5255	False	NA	-14	True	AATAAA	-9	NA	62322527	62291058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
Isoform_9792_5	chr11	+	3066	16	ISM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	95	2562	0	-3	5prime_fragment	FALSE	canonical	3	128	junction_10	12.3605105971486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	2847	False	NA	NA	False	NA	NA	NA	78192449	78210721	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292
Isoform_9793_113	chr11	+	3790	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	95	2	0	-2	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGTCCACTGAATC	2847	False	NA	6	True	AATAAA	-16	NA	78192449	78213281	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
Isoform_9795_72	chr11	+	1626	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	137	1023	-63	-2	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACCGCTCTGTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	78213930	78217584	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
Isoform_9796_383	chr11	+	2446	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	44	11	44	-11	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATATGGATGACCATAA	NA	False	NA	17	True	NA	NA	NA	78219284	78233597	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
Isoform_9798_60	chr11	+	2304	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	44	-13	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATATGGATGACCAT	NA	False	NA	15	True	NA	NA	NA	78219284	78233595	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
Isoform_9800_9	chr11	+	1375	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	-15	11	-7	-11	multi-exon	FALSE	canonical	3	22	junction_4	104.920207777148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGGCCAGCCTGTGTG	NA	False	NA	8	True	AATAAA	-15	NA	78234316	78239979	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
Isoform_9801_97	chr11	+	1282	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	39	8	15	-8	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	78234346	78239982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
Isoform_9802_56	chr11	+	1318	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	1	10	1	-10	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCGGCCAGCCTGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	78234308	78239980	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
Isoform_9803_3	chr11	+	1498	4	FSM	ENSMUSG00000002058.14	ENSMUST00000149161.2	1185	4	-53	-260	-6	-8	multi-exon	FALSE	canonical	3	255	junction_2	14.613540144522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	78234317	78239982	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78234613_78238043_78238158_78238622_78239086_78239356
Isoform_9804_111	chr11	+	1958	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	12	8	12	-8	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTACTGGGCTTTGGG	8349	False	NA	18	True	AGTAAA	-19	NA	78356534	78362763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
Isoform_9805_7	chr11	+	1109	4	FSM	ENSMUSG00000020829.10	ENSMUST00000146431.3	749	4	-45	-315	8	-8	multi-exon	FALSE	canonical	3	25	junction_1	30.8796948747159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTACTGGGCTTTGGG	8345	False	NA	18	True	AGTAAA	-19	NA	78356530	78362763	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78356832_78359450_78359535_78361520_78361678_78362196
Isoform_9806_53	chr11	+	1978	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	76	0	76	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1711	False	NA	18	True	ATTAAA	-15	NA	78403094	78413562	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_9808_4	chr11	+	2313	11	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	72	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1707	False	NA	16	True	ATTAAA	-13	NA	78403090	78413560	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
Isoform_9809_4	chr11	+	2013	4	ISM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-10	13	7	-12	intron_retention	FALSE	canonical	3	238	junction_1	112.395136312327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	23	True	AATGAA	-30	NA	78427260	78432298	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785
Isoform_981_20	chr10	-	1276	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	23	1298	23	-1298	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCTTCTTGGAAACA	5221	False	NA	-24	True	ATTAAA	-23	NA	62322561	62292353	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
Isoform_9810_3	chr11	+	1168	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-12	11	5	-10	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	25	True	AATGAA	-32	NA	78427258	78432300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
Isoform_9811_21	chr11	+	1060	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	76	5	-6	-5	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427262	78432558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_9812_32	chr11	+	800	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	75	266	-7	-13	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427261	78432297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_9813_7	chr11	+	882	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	-7	266	-7	-13	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427179	78432297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_9814_9	chr11	+	935	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	-39	13	6	-13	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427259	78432297	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
Isoform_9815_30	chr11	+	841	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-16	-243	-1	-5	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427252	78432558	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_9816_32	chr11	+	573	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-6	15	-6	-10	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	25	True	AATGAA	-32	NA	78427262	78432300	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
Isoform_9817_3	chr11	+	3525	3	FSM	ENSMUSG00000072640.12	ENSMUST00000141321.2	341	3	-6	-3178	-6	2159	multi-exon	FALSE	canonical	3	164	junction_1	33	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAGAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	78717423	78732260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78717463_78726843_78726985_78728915
Isoform_9818_44	chr11	+	2599	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	0	5436	0	2159	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAGAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	78717409	78732260	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
Isoform_9820_52	chr11	+	422	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	18	7595	-2	0	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGAGGTGGTTCTCGT	NA	False	NA	20	True	AAGAAA	-13	NA	78717427	78730101	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
Isoform_9821_4	chr11	+	3226	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	-80	4010	-80	-4010	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGTTTGTTTTCTTG	NA	False	NA	20	True	TATAAA	-20	NA	79481957	79584839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_9822_25	chr11	+	3053	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-12	-4010	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGTTTGTTTTCTTG	NA	False	NA	20	True	TATAAA	-20	NA	79551375	79584839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_9823_5	chr11	+	7079	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-37	-9	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGACTTGTGTGAAC	NA	False	NA	2	True	AATAAA	-13	NA	79551350	79588840	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_9824_8	chr11	+	2975	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-3	-4010	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	29.6014029322185	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGTTTGTTTTCTTG	NA	False	NA	20	True	TATAAA	-20	NA	79551384	79584839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
Isoform_984_9	chr10	-	2380	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	346.299504675903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAGTTTGTAGTTTA	5267	False	NA	-9	True	AATAAA	-14	NA	62322515	62291053	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62322436
Isoform_9843_131	chr11	+	4371	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	2	0	2	0	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883933	79924949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
Isoform_9844_109	chr11	+	4397	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-24	0	-24	0	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883907	79924949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
Isoform_985_29	chr10	-	2471	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAACTTAAGTTTGTA	5245	False	NA	-14	True	AATAAA	-9	NA	62322537	62291058	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
Isoform_9860_12	chr11	+	4334	15	FSM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	-30	-1	-30	0	multi-exon	FALSE	canonical	3	72	junction_3	508.713027037397	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883901	79924949	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
Isoform_9865_9	chr11	+	2393	3	ISM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	10	37741	10	-10458	5prime_fragment	FALSE	canonical	3	99	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAAGTACTGGAGTCC	6009	False	NA	NA	False	AAAAAG	-2	NA	79980235	79988876	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_79980663_79984980_79986849_79988778
Isoform_9869_4	chr11	+	3602	12	ISM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	10	22990	10	4293	5prime_fragment	FALSE	canonical	3	77	junction_5	14.0218247830992	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAGAGAGATGAAAAA	6009	False	NA	12	True	AAGAAA	-13	NA	79980235	80003627	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574
Isoform_9870_10	chr11	+	2866	10	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	0	40	0	-40	intron_retention	FALSE	canonical	3	12	junction_2	3.01027048536535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	80044930	80069744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
Isoform_9873_5	chr11	+	1772	11	FSM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	-27	40	-27	-40	multi-exon	FALSE	canonical	1	2	junction_10	5.38609320379809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	80044903	80069744	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80068101_80069221
Isoform_9875_38	chr11	+	1960	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	21	3	21	-3	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	31	True	NA	NA	NA	80074697	80090580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
Isoform_9876_10	chr11	+	1816	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	21	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	31	True	NA	NA	NA	80074697	80090580	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
Isoform_9878_12	chr11	+	3262	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	33	2	-3	-2	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	7	True	AATAAA	-18	NA	80099877	80157636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
Isoform_988_290	chr10	-	2440	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	31	1	-10	-1	multi-exon	FALSE	canonical	3	136	junction_2	17.3629554575891	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTATTACCTCTTT	8232	False	NA	-1	True	AATAAA	-21	NA	62414205	62394249	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
Isoform_9880_37	chr11	+	3170	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-96	-45	4	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099848	80157638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
Isoform_9881_55	chr11	+	3109	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-35	-45	0	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
Isoform_9885_48	chr11	+	3141	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	24	1095	-5	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099904	80157638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
Isoform_9887_201	chr11	+	3011	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	676	0	-2	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	7	True	AATAAA	-18	NA	80099909	80157636	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_9888_49	chr11	+	3046	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-33	674	-4	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099876	80157638	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_9891_7	chr11	+	3686	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	11	-10	11	10	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACAACTGTTTCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	80099920	80158322	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
Isoform_9892_3	chr11	+	3731	9	FSM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	2	3	2	-3	multi-exon	FALSE	canonical	2	4	junction_6	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCAGGGAGTGACCTCA	7827	False	NA	NA	False	ATTAAA	-20	NA	80191739	80246778	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
Isoform_9893_3	chr11	+	3782	9	FSM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	-59	13	-59	-13	multi-exon	FALSE	canonical	2	4	junction_6	1.93649167310371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGGTTATTCAGGG	7766	False	NA	NA	False	ATTAAA	-10	NA	80191678	80246768	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
Isoform_9896_86	chr11	+	2310	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-682	0	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
Isoform_9897_190	chr11	+	2200	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-572	0	-107	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATGCCTTTTTATT	NA	False	NA	20	True	AATAAA	-9	NA	80274156	80286964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
Isoform_99_1720	ERCC-00113	+	823	1	FSM	ERCC-00113A	DQ883663	825	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1720	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	825	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_ERCC-00113_+_0_800
Isoform_9900_148	chr11	+	2217	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	28	0	0	0	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
Isoform_9901_390	chr11	+	2107	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	28	110	0	-107	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATGCCTTTTTATT	NA	False	NA	20	True	AATAAA	-9	NA	80274156	80286964	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
Isoform_9909_144	chr11	+	1612	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	13	1	-8	-1	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAGAAA	NA	False	NA	-45	True	NA	NA	NA	80319461	80362734	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
Isoform_9911_23	chr11	+	1670	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	13	-57	-8	57	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319461	80362792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
Isoform_9913_455	chr11	+	1487	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	20	1341	1	-2	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAGAA	NA	False	NA	-46	True	NA	NA	NA	80319470	80362733	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
Isoform_9914_245	chr11	+	1562	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	4	1282	4	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319454	80362792	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
Isoform_9920_4	chr11	+	1436	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	196	1	196	-1	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTAGTTACCGAGTCA	NA	False	NA	4	True	AGTAAA	-22	NA	80701196	80712858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
Isoform_9922_7	chr11	+	3672	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-43	2168	18	4	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGCAAGACCTTTATT	NA	False	NA	25	True	TTTAAA	-21	NA	82671985	82692856	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9923_4	chr11	+	5909	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-37	-75	-19	-1	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82671991	82695099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9924_5	chr11	+	3636	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	-7	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	50.9559583885031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGTATGTGGCAAGAC	NA	False	NA	18	True	TTTAAA	-14	NA	82672011	82692849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9926_3	chr11	+	3041	20	FSM	ENSMUSG00000020697.17	ENSMUST00000080461.12	3056	20	15	0	2	0	multi-exon	FALSE	canonical	2	4	junction_19	43.9286124489467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGTGTCTGTCTCTC	NA	False	NA	NA	False	ATTAAA	-34	NA	82672025	82691479	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82691324
Isoform_9927_22	chr11	+	3645	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	78	837	1	0	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATGTGGCAAGACCT	NA	False	NA	20	True	TTTAAA	-16	NA	82672011	82692851	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9928_3	chr11	+	4093	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	52	415	18	-415	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTCTCAAGTTACCAGT	NA	False	NA	NA	False	CATAAA	-19	NA	82671985	82693273	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9929_4	chr11	+	5879	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	92	-1411	2	-1	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82672025	82695099	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9931_7	chr11	+	3601	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	24	11	14	-10	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAATGCTTCTTGTATGT	NA	False	NA	10	True	TTTAAA	-6	NA	82672042	82692841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9932_3	chr11	+	5871	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	11	-2246	1	-2	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTTTCCCCCCC	NA	False	NA	9	True	AATAAA	-14	NA	82672029	82695098	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9933_6	chr11	+	3674	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	-49	11	2	-10	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAATGCTTCTTGTATGT	NA	False	NA	10	True	TTTAAA	-6	NA	82671969	82692841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
Isoform_9934_8	chr11	+	2797	2	FSM	ENSMUSG00000065715.3_ENSMUSG00000093483.2	ENSMUST00000177248.2	431	2	-25	-2341	4	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTGTTTGGGTAAGA	5852	False	NA	10	True	ATTAAA	-19	NA	83182528	83185458	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83182660_83182792
Isoform_9935_71	chr11	+	386	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	3	-6	3	5	multi-exon	FALSE	non_canonical	0	0	junction_1	190.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGGGTAAGATCTTT	5851	False	NA	15	True	ATTAAA	-24	NA	83182527	83185463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83182660_83182792_83182924_83185340
Isoform_9936_5	chr11	+	373	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	-21	4	0	-1	multi-exon	FALSE	canonical	3	49	junction_1	166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTATTTGTTTGGGT	5848	False	NA	6	True	ATTAAA	-15	NA	83182524	83185454	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83182660_83182799_83182924_83185340
Isoform_9937_6	chr11	+	526	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	-48	-7	-4	5	multi-exon	FALSE	canonical	3	381	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGGGTAAGATCTTT	5844	False	NA	15	True	ATTAAA	-24	NA	83182520	83185463	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83182924_83185340
Isoform_9939_8	chr11	+	5379	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	243	3	-8	-3	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTGTGGTATGG	2202	False	NA	NA	False	AATAAA	-13	NA	83193551	83295858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9940_8	chr11	+	3072	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	194	2359	-26	32	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGAACTCTTAACTGG	2153	False	NA	12	True	AATAAA	-29	NA	83193502	83293502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9941_7	chr11	+	3394	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	214	2017	-6	6	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCACCTTATTGTTTT	2173	False	NA	NA	False	ATTAAA	-26	NA	83193522	83293844	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9942_17	chr11	+	3341	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-71	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAACTGCACCTTATT	2179	False	NA	NA	False	ATTAAA	-21	NA	83193528	83293839	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9943_22	chr11	+	3004	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-71	336	0	32	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGAACTCTTAACTGG	2179	False	NA	12	True	AATAAA	-29	NA	83193528	83293502	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9944_6	chr11	+	5396	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-107	-2020	-36	-3	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTGTGGTATGG	2143	False	NA	NA	False	AATAAA	-13	NA	83193492	83295858	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
Isoform_9945_4	chr11	+	3151	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	1	4	1	-2	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTCGGTGTCAGCTCT	1437	False	NA	23	True	ATTAAA	-27	NA	83300514	83311861	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
Isoform_9946_6	chr11	+	857	7	FSM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	25	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_5	8.74960316560446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTGTAAAAAAAAAGGCT	8679	False	NA	NA	False	CATAAA	-35	NA	83363936	83380040	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750
Isoform_9948_23	chr11	+	2027	17	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.3723600325219	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGAGTGCATTATTTG	8679	False	NA	39	True	AATAAA	-19	NA	83363936	83397567	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395542_83395561_83395931_83397243
Isoform_9950_45	chr11	+	950	7	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	18731	-2	-258	5prime_fragment	FALSE	canonical	3	50	junction_5	6.46572158042361	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTCTGTCCACTGAG	4033	False	NA	NA	False	NA	NA	NA	83644537	83655849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711
Isoform_9951_5	chr11	+	2560	15	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	7803	-2	-2966	5prime_fragment	FALSE	canonical	3	50	junction_5	7.08728381234551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGGCGAGAACAG	4033	False	NA	NA	False	AATAAA	-15	NA	83644537	83666777	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526
Isoform_9952_45	chr11	+	3864	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	16	1734	-2	-1	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAATTGTGTTTTCAA	4033	False	NA	3	True	AATAAA	-22	NA	83644537	83672846	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
Isoform_9953_3	chr11	+	1163	7	ISM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	-11	16998	7	-258	5prime_fragment	TRUE	canonical	2	8	junction_1	21.3124898175277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTCTGTCCACTGAG	4024	False	NA	NA	False	NA	NA	NA	83644528	83655849	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711
Isoform_9954_102	chr11	+	1665	13	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	5551	103	5376	5prime_fragment	FALSE	canonical	3	267	junction_7	31.5527556465182	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCATCTAAACTTACTC	NA	False	NA	16	True	CATAAA	-22	NA	83832990	83848363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291
Isoform_9955_64	chr11	+	1723	13	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	45	5551	45	5376	5prime_fragment	FALSE	canonical	3	267	junction_7	31.5527556465182	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCATCTAAACTTACTC	NA	False	NA	16	True	CATAAA	-22	NA	83832932	83848363	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291
Isoform_9957_24	chr11	+	2193	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	898	103	-898	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTGTGTGTATGGAGA	NA	False	NA	23	True	AATAAA	-24	NA	83832990	83853016	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_9958_7	chr11	+	3083	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	101	10	101	-10	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAAAGTTTGTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	83832988	83853904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_9959_3	chr11	+	3121	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	63	10	63	-10	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAAAGTTTGTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	83832950	83853904	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_9961_26	chr11	+	1830	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	1261	103	-1261	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCCTGCAGTGTAACTT	NA	False	NA	NA	False	AATAAA	-13	NA	83832990	83852653	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_9962_8	chr11	+	2248	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	47	899	47	-899	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTTGTGTGTATGGAG	NA	False	NA	22	True	AATAAA	-23	NA	83832934	83853015	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
Isoform_9965_4	chr11	+	4090	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-1	61	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCCTGCCACTGGTCT	1431	False	NA	NA	False	AATAAA	-19	NA	83855252	83931841	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
Isoform_9966_3	chr11	+	434	4	FSM	ENSMUSG00000020532.19	ENSMUST00000137500.9	431	4	3	-6	3	6	multi-exon	FALSE	canonical	3	58	junction_1	9.80929264637478	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAATAGACTCACAA	NA	False	NA	NA	False	AGTAAA	-15	NA	84070659	84105027	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983
Isoform_9967_5	chr11	+	2718	3	ISM	ENSMUSG00000020527.15	ENSMUST00000020837.7	1669	6	-41	5464	16	4600	intron_retention	FALSE	canonical	3	104	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	84771151	84778417	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	ISM_chr11_+_84771338_84773411_84773554_84776027
Isoform_9969_4	chr11	+	3740	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	31.3266828534579	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGTTTTTGTTTTAA	NA	False	NA	22	True	AATAAA	-30	NA	84771149	84801954	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
Isoform_997_11	chr10	-	2845	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	13	1864	13	-1864	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGTGTGTCGATCTT	NA	False	NA	-4	True	AGTAAA	-19	NA	62438047	62417893	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
Isoform_9972_88	chr11	+	2123	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	24	752	24	-752	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTATTTTGGCCTTG	7730	False	NA	30	True	AATAAA	-30	NA	85202093	85237140	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_9973_74	chr11	+	2899	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGGCGTTTTGTTGG	7706	False	NA	3	True	AATAAA	-13	NA	85202069	85237892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_9976_4	chr11	+	2995	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	117	-213	117	213	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCGCCGAGATTCTATAAA	7823	False	NA	NA	False	AGTAAA	-31	NA	85202186	85238105	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
Isoform_9977_5	chr11	+	2716	24	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	0	-23354	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	30.6146856787074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCGTCAACAGACTTG	3496	False	NA	NA	False	NA	NA	NA	85244010	85692779	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610
Isoform_9978_9	chr11	+	3546	25	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	31.2925266193419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3522	False	NA	14	True	AATAAA	-22	NA	85244036	85716884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_998_6	chr10	-	4723	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-2	1	-2	-1	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTAGTTCTTGGTGGCTTT	NA	False	NA	-6	True	AATAAA	-17	NA	62438062	62416030	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
Isoform_9980_6	chr11	+	3599	25	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	32.682394173146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	3486	False	NA	13	True	AATAAA	-21	NA	85244000	85716883	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245419_85245506_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_9982_13	chr11	+	2737	24	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	-5	-11241	combination_of_known_junctions	FALSE	canonical	3	37	junction_23	21.9851298774373	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAACTTCCTGTCTTTG	3473	False	NA	NA	False	AAAACA	-38	NA	85243987	85704892	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825
Isoform_9983_7	chr11	+	3679	26	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_24	29.6904024896935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
Isoform_9984_9	chr11	+	3613	25	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_23	26.6291076643586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85712847_85712939_85716027
Isoform_9985_52	chr11	+	3522	24	FSM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-45	-708	0	0	multi-exon	FALSE	canonical	3	61	junction_23	18.8377812860411	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
Isoform_9987_15	chr11	+	2798	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-20	1645	-20	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092175	86100373	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86092379_86097778
Isoform_9989_3	chr11	+	3614	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-11	820	-11	-820	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCTGTTTCCAAGA	NA	False	NA	NA	False	AGTAAA	-11	NA	86092184	86101198	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86092379_86097778
Isoform_999_16	chr10	-	2647	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTGTTAAGAGTTT	8101	False	NA	-14	True	ATTAAA	-25	NA	62487002	62451796	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
Isoform_9990_96	chr11	+	1966	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	9	2477	9	-2477	multi-exon	FALSE	canonical	3	265	junction_2	21.9146070008111	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGACCTGTTATGTA	NA	False	NA	7	True	AATAAA	-18	NA	86375491	86387374	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_9991_28	chr11	+	1999	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	-27	2480	-27	-2480	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGTGGACCTGTTAT	NA	False	NA	4	True	AATAAA	-15	NA	86375455	86387371	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
Isoform_9993_4	chr11	+	1946	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	-75	0	-75	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	86435741	86458186	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
Isoform_9994_10	chr11	+	1868	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	0	3	0	-2	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTCAGTCTGTTAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	86435816	86458183	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
Isoform_9997_3	chr11	+	763	3	NNC	ENSMUSG00000072582.10	novel	3132	3	NA	NA	96	-2272	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTCTGTTCCCATGTT	NA	False	NA	14	True	AATAAA	-21	NA	86574906	86581011	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	NNC_chr11_+_86574950_86578861_86578955_86580384
Isoform_9998_3	chr11	+	2800	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	82	156	82	-156	multi-exon	FALSE	canonical	3	249	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAAACATTTTTTAC	NA	False	NA	-4	True	AATAAA	-4	NA	86574892	86583127	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86574950_86580384
Isoform_9999_70	chr11	+	673	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	96	2269	96	-2269	multi-exon	FALSE	canonical	3	249	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTTCCCATGTTCCT	NA	False	NA	17	True	AATAAA	-24	NA	86574906	86581014	ES_R2C2only	iso_detect_ref_Mandalorion_R2C2only	FSM_chr11_+_86574950_86580384
